Query 003042
Match_columns 854
No_of_seqs 658 out of 3947
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 15:53:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003042.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003042hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 3E-184 8E-189 1644.5 86.5 836 2-839 4-850 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 6E-156 1E-160 1388.9 79.8 747 50-839 93-932 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 4E-148 1E-152 1334.6 81.0 749 48-840 8-790 (797)
4 PRK14501 putative bifunctional 100.0 7E-140 1E-144 1268.4 81.5 720 51-835 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 1E-127 3E-132 1119.3 59.3 728 50-831 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 1E-120 3E-125 1018.3 48.5 456 51-544 2-457 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 4E-119 9E-124 1018.1 47.9 462 56-540 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 2E-119 3E-124 1025.0 30.7 468 51-540 1-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 7E-114 1E-118 957.3 42.7 467 46-541 10-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 1E-107 3E-112 931.3 47.5 454 52-539 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 5E-98 1E-102 859.5 51.4 459 52-538 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 1.1E-33 2.4E-38 339.6 41.8 544 192-786 312-990 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 6.7E-31 1.5E-35 274.9 21.7 249 572-838 5-256 (266)
14 TIGR00685 T6PP trehalose-phosp 100.0 2E-30 4.4E-35 274.6 25.5 237 583-834 1-243 (244)
15 PRK10187 trehalose-6-phosphate 100.0 4.1E-30 8.9E-35 274.9 25.6 231 585-838 14-248 (266)
16 PF02358 Trehalose_PPase: Treh 100.0 4.5E-31 9.8E-36 278.2 14.1 227 589-824 1-235 (235)
17 PLN03017 trehalose-phosphatase 100.0 1.9E-29 4.1E-34 274.1 26.4 245 574-838 101-363 (366)
18 PLN02151 trehalose-phosphatase 100.0 4.8E-29 1E-33 270.2 26.5 242 581-838 94-349 (354)
19 PLN02580 trehalose-phosphatase 100.0 3.5E-29 7.7E-34 274.5 25.3 241 578-837 112-380 (384)
20 COG0561 Cof Predicted hydrolas 99.9 2.1E-25 4.5E-30 239.5 21.3 226 583-835 1-262 (264)
21 PRK10513 sugar phosphate phosp 99.9 7.5E-26 1.6E-30 243.7 17.5 231 583-834 1-268 (270)
22 PRK15126 thiamin pyrimidine py 99.9 5.1E-25 1.1E-29 237.5 21.7 229 584-835 1-263 (272)
23 PRK10976 putative hydrolase; P 99.9 7E-26 1.5E-30 243.4 14.9 223 585-834 2-264 (266)
24 cd03792 GT1_Trehalose_phosphor 99.9 1.1E-24 2.4E-29 245.5 22.2 301 166-540 63-371 (372)
25 PRK01158 phosphoglycolate phos 99.9 5.7E-24 1.2E-28 223.4 20.9 217 583-834 1-229 (230)
26 PLN02887 hydrolase family prot 99.9 1E-23 2.3E-28 244.8 21.9 230 577-834 301-579 (580)
27 PRK15484 lipopolysaccharide 1, 99.9 6.6E-23 1.4E-27 231.7 27.7 269 191-540 100-377 (380)
28 PRK03669 mannosyl-3-phosphogly 99.9 8.9E-24 1.9E-28 227.6 19.4 226 584-836 6-270 (271)
29 PLN02939 transferase, transfer 99.9 1.1E-22 2.4E-27 241.5 29.3 320 169-543 590-969 (977)
30 TIGR02472 sucr_P_syn_N sucrose 99.9 8.6E-23 1.9E-27 235.2 24.7 315 169-538 94-438 (439)
31 PLN02316 synthase/transferase 99.9 2.1E-22 4.6E-27 243.5 29.0 309 168-542 688-1035(1036)
32 PRK10530 pyridoxal phosphate ( 99.9 4.2E-23 9.2E-28 222.4 20.3 229 583-834 1-271 (272)
33 PF08282 Hydrolase_3: haloacid 99.9 5.1E-23 1.1E-27 217.8 19.9 220 588-830 1-254 (254)
34 PRK00654 glgA glycogen synthas 99.9 2.3E-22 4.9E-27 233.3 26.2 294 192-542 120-464 (466)
35 PRK14098 glycogen synthase; Pr 99.9 1.5E-22 3.3E-27 234.9 23.7 318 167-541 119-486 (489)
36 TIGR01484 HAD-SF-IIB HAD-super 99.9 3.8E-23 8.3E-28 213.1 14.6 194 587-792 1-201 (204)
37 TIGR03449 mycothiol_MshA UDP-N 99.9 2.2E-21 4.7E-26 221.1 30.2 286 192-541 103-402 (405)
38 cd03796 GT1_PIG-A_like This fa 99.9 1E-21 2.2E-26 223.6 25.0 283 184-543 84-370 (398)
39 TIGR02095 glgA glycogen/starch 99.9 9E-22 1.9E-26 229.0 25.2 310 171-539 110-471 (473)
40 PRK14099 glycogen synthase; Pr 99.9 3.1E-21 6.7E-26 223.8 28.2 297 187-543 132-481 (485)
41 cd03818 GT1_ExpC_like This fam 99.9 8.1E-22 1.8E-26 224.2 22.9 301 170-535 69-395 (396)
42 PRK15427 colanic acid biosynth 99.9 1.4E-21 3E-26 222.6 24.5 272 192-540 120-405 (406)
43 TIGR01482 SPP-subfamily Sucros 99.9 2.6E-22 5.6E-27 210.1 16.3 210 588-833 1-224 (225)
44 TIGR00099 Cof-subfamily Cof su 99.9 5.8E-22 1.3E-26 211.7 17.5 216 587-829 1-255 (256)
45 TIGR01487 SPP-like sucrose-pho 99.9 8.6E-22 1.9E-26 204.8 17.9 206 585-829 1-214 (215)
46 PLN02871 UDP-sulfoquinovose:DA 99.9 4.9E-21 1.1E-25 222.3 25.1 283 184-544 140-438 (465)
47 TIGR03088 stp2 sugar transfera 99.9 2E-20 4.3E-25 210.7 26.5 207 289-540 160-372 (374)
48 PTZ00174 phosphomannomutase; P 99.9 1.2E-20 2.7E-25 200.2 23.2 199 582-791 2-225 (247)
49 TIGR02149 glgA_Coryne glycogen 99.9 3.1E-20 6.8E-25 209.9 27.2 285 191-541 84-387 (388)
50 cd03791 GT1_Glycogen_synthase_ 99.9 1.9E-20 4E-25 218.2 25.5 310 170-538 110-474 (476)
51 TIGR01485 SPP_plant-cyano sucr 99.9 4E-21 8.7E-26 204.4 17.7 221 586-833 2-246 (249)
52 cd03800 GT1_Sucrose_synthase T 99.9 3.7E-20 8E-25 209.4 26.6 286 188-535 101-397 (398)
53 PRK00192 mannosyl-3-phosphogly 99.9 6.5E-21 1.4E-25 205.6 19.2 227 583-835 2-271 (273)
54 TIGR02470 sucr_synth sucrose s 99.9 9.6E-20 2.1E-24 216.2 30.2 339 166-538 361-745 (784)
55 cd04951 GT1_WbdM_like This fam 99.9 4.8E-20 1.1E-24 205.1 25.7 281 182-538 73-358 (360)
56 cd03806 GT1_ALG11_like This fa 99.9 2.9E-20 6.3E-25 212.7 23.9 272 187-529 106-415 (419)
57 PLN00142 sucrose synthase 99.9 6E-20 1.3E-24 217.8 27.0 333 166-538 384-768 (815)
58 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 9.8E-21 2.1E-25 202.3 18.2 220 587-833 1-255 (256)
59 cd03813 GT1_like_3 This family 99.9 2.8E-20 6.1E-25 216.4 23.6 275 190-536 173-472 (475)
60 cd05844 GT1_like_7 Glycosyltra 99.9 7.6E-20 1.7E-24 204.8 24.5 274 183-535 77-365 (367)
61 cd03812 GT1_CapH_like This fam 99.8 1.4E-19 3.1E-24 201.5 24.0 267 183-521 75-346 (358)
62 PLN02949 transferase, transfer 99.8 2.7E-19 5.8E-24 205.8 26.8 314 141-542 109-458 (463)
63 cd04962 GT1_like_5 This family 99.8 4.1E-19 8.8E-24 199.2 27.3 287 176-540 73-370 (371)
64 TIGR02463 MPGP_rel mannosyl-3- 99.8 2.8E-20 6.1E-25 194.3 16.6 199 587-792 1-217 (221)
65 PLN02423 phosphomannomutase 99.8 1.1E-19 2.5E-24 192.2 20.0 214 584-834 6-244 (245)
66 cd03819 GT1_WavL_like This fam 99.8 2.1E-19 4.6E-24 199.9 23.0 268 184-524 74-348 (355)
67 cd03805 GT1_ALG2_like This fam 99.8 3.7E-19 8.1E-24 201.4 24.7 281 191-533 95-391 (392)
68 TIGR02471 sucr_syn_bact_C sucr 99.8 9.2E-20 2E-24 192.4 18.4 214 587-833 1-234 (236)
69 PRK15490 Vi polysaccharide bio 99.8 4E-19 8.6E-24 202.3 24.2 293 183-540 275-575 (578)
70 PRK15179 Vi polysaccharide bio 99.8 2.1E-19 4.5E-24 213.7 22.7 282 184-537 396-690 (694)
71 PRK10307 putative glycosyl tra 99.8 1.5E-18 3.3E-23 198.4 27.6 282 192-542 108-409 (412)
72 cd03809 GT1_mtfB_like This fam 99.8 4.2E-19 9.1E-24 197.2 21.6 275 187-535 84-364 (365)
73 cd04946 GT1_AmsK_like This fam 99.8 2.1E-18 4.6E-23 196.8 26.2 272 188-535 125-406 (407)
74 cd03799 GT1_amsK_like This is 99.8 1.9E-18 4E-23 192.0 25.1 274 178-532 70-353 (355)
75 cd03801 GT1_YqgM_like This fam 99.8 1.9E-18 4.1E-23 190.0 24.6 287 183-538 80-373 (374)
76 cd03821 GT1_Bme6_like This fam 99.8 1.2E-18 2.6E-23 193.0 23.1 273 192-535 89-374 (375)
77 TIGR02918 accessory Sec system 99.8 2.2E-18 4.7E-23 200.1 26.1 282 177-540 201-499 (500)
78 PLN02382 probable sucrose-phos 99.8 6.8E-19 1.5E-23 199.1 20.7 227 581-836 5-262 (413)
79 PRK10125 putative glycosyl tra 99.8 6.7E-19 1.5E-23 200.2 19.9 187 289-539 212-403 (405)
80 cd03822 GT1_ecORF704_like This 99.8 2.3E-18 5.1E-23 191.2 23.2 282 184-538 72-365 (366)
81 cd03807 GT1_WbnK_like This fam 99.8 4E-18 8.8E-23 188.1 24.9 281 185-537 77-363 (365)
82 cd03817 GT1_UGDG_like This fam 99.8 2.8E-18 6E-23 190.3 23.1 270 183-526 79-362 (374)
83 cd03798 GT1_wlbH_like This fam 99.8 4.4E-18 9.6E-23 187.8 24.0 283 186-540 91-376 (377)
84 cd04949 GT1_gtfA_like This fam 99.8 2.8E-18 6.2E-23 193.0 22.2 282 171-533 82-371 (372)
85 PRK14502 bifunctional mannosyl 99.8 1.1E-18 2.3E-23 201.6 18.2 201 582-791 413-652 (694)
86 cd03814 GT1_like_2 This family 99.8 5.1E-18 1.1E-22 188.2 22.9 274 185-538 80-363 (364)
87 cd03794 GT1_wbuB_like This fam 99.8 7.6E-18 1.7E-22 187.4 24.4 278 186-534 97-393 (394)
88 PHA01633 putative glycosyl tra 99.8 1.3E-18 2.8E-23 190.5 16.6 193 294-535 118-334 (335)
89 PRK09922 UDP-D-galactose:(gluc 99.8 4.5E-18 9.8E-23 190.9 21.4 240 182-508 78-326 (359)
90 cd03820 GT1_amsD_like This fam 99.8 5.3E-18 1.1E-22 185.6 20.8 264 185-535 80-347 (348)
91 cd03793 GT1_Glycogen_synthase_ 99.8 3.9E-17 8.5E-22 186.2 28.4 353 143-539 105-585 (590)
92 PLN02846 digalactosyldiacylgly 99.8 8.1E-18 1.7E-22 191.1 19.7 268 184-540 112-391 (462)
93 PLN02501 digalactosyldiacylgly 99.8 4.7E-18 1E-22 195.1 17.8 266 185-538 431-707 (794)
94 cd03823 GT1_ExpE7_like This fa 99.8 3.6E-17 7.9E-22 180.7 23.8 262 182-536 90-355 (359)
95 cd03808 GT1_cap1E_like This fa 99.8 3.4E-17 7.4E-22 180.0 22.3 278 183-535 75-358 (359)
96 TIGR02461 osmo_MPG_phos mannos 99.8 1E-17 2.2E-22 175.1 15.5 191 587-791 1-220 (225)
97 cd03816 GT1_ALG1_like This fam 99.8 8.5E-17 1.8E-21 184.1 23.8 276 192-536 97-409 (415)
98 cd03795 GT1_like_4 This family 99.7 5.8E-17 1.3E-21 180.1 21.6 260 186-522 81-347 (357)
99 PRK12702 mannosyl-3-phosphogly 99.7 5.5E-17 1.2E-21 170.6 18.6 191 585-792 1-248 (302)
100 PHA01630 putative group 1 glyc 99.7 4.9E-17 1.1E-21 179.7 18.4 186 290-539 119-329 (331)
101 cd03811 GT1_WabH_like This fam 99.7 1.3E-16 2.8E-21 174.7 20.1 247 185-505 78-328 (353)
102 TIGR03087 stp1 sugar transfera 99.7 4.7E-16 1E-20 177.0 23.7 190 290-539 197-395 (397)
103 cd04955 GT1_like_6 This family 99.7 4.1E-16 9E-21 173.8 22.4 267 192-538 86-362 (363)
104 cd03802 GT1_AviGT4_like This f 99.7 5.8E-16 1.3E-20 170.8 22.7 248 183-537 82-333 (335)
105 cd03804 GT1_wbaZ_like This fam 99.7 3.6E-16 7.7E-21 174.6 20.5 245 191-533 84-349 (351)
106 cd03825 GT1_wcfI_like This fam 99.7 4.5E-16 9.8E-21 173.5 20.2 195 289-540 159-364 (365)
107 PF05116 S6PP: Sucrose-6F-phos 99.7 4E-17 8.8E-22 172.9 9.5 193 585-812 2-209 (247)
108 PRK05749 3-deoxy-D-manno-octul 99.7 5.1E-15 1.1E-19 170.1 24.2 275 179-525 115-406 (425)
109 PLN02275 transferase, transfer 99.7 1.8E-15 3.9E-20 170.6 19.2 239 187-504 99-371 (371)
110 COG0297 GlgA Glycogen synthase 99.7 9.1E-15 2E-19 166.4 23.0 294 192-542 132-479 (487)
111 PF00534 Glycos_transf_1: Glyc 99.6 2.5E-15 5.5E-20 150.0 10.9 144 324-508 13-160 (172)
112 cd04950 GT1_like_1 Glycosyltra 99.5 3.8E-13 8.2E-18 151.9 22.2 267 187-540 99-371 (373)
113 KOG1111 N-acetylglucosaminyltr 99.5 1.3E-13 2.9E-18 145.4 9.6 188 265-506 146-335 (426)
114 COG3769 Predicted hydrolase (H 99.5 3.7E-13 8E-18 132.7 11.6 200 583-791 5-230 (274)
115 PLN02605 monogalactosyldiacylg 99.4 2.5E-11 5.5E-16 137.5 24.9 191 290-536 174-377 (382)
116 KOG0853 Glycosyltransferase [C 99.4 2E-11 4.4E-16 137.2 18.1 185 326-539 273-466 (495)
117 COG0438 RfaG Glycosyltransfera 99.3 7.5E-10 1.6E-14 120.1 23.1 198 290-541 173-377 (381)
118 cd01635 Glycosyltransferase_GT 99.2 2.1E-10 4.6E-15 118.2 17.5 111 331-482 109-220 (229)
119 PRK13609 diacylglycerol glucos 99.2 4.1E-09 8.9E-14 119.3 25.7 274 172-541 88-372 (380)
120 cd03785 GT1_MurG MurG is an N- 99.2 2E-09 4.4E-14 120.0 21.0 249 180-529 81-346 (350)
121 TIGR00236 wecB UDP-N-acetylglu 99.1 3.9E-09 8.5E-14 118.8 22.9 253 177-508 76-336 (365)
122 PRK00726 murG undecaprenyldiph 99.1 1.8E-09 4E-14 121.0 19.6 258 182-539 85-356 (357)
123 cd03786 GT1_UDP-GlcNAc_2-Epime 99.1 9.6E-09 2.1E-13 115.3 22.5 254 174-510 75-341 (363)
124 TIGR01133 murG undecaprenyldip 99.1 4.9E-09 1.1E-13 116.9 19.8 180 292-532 153-346 (348)
125 PRK13608 diacylglycerol glucos 99.1 1.1E-08 2.4E-13 116.4 22.6 271 180-545 96-376 (391)
126 TIGR01670 YrbI-phosphatas 3-de 99.0 4.5E-10 9.7E-15 110.5 6.6 72 751-837 76-152 (154)
127 PRK09484 3-deoxy-D-manno-octul 99.0 6.4E-10 1.4E-14 112.6 7.1 124 583-821 19-153 (183)
128 TIGR02094 more_P_ylases alpha- 98.9 1.8E-07 3.9E-12 110.7 25.7 181 325-537 388-597 (601)
129 KOG1387 Glycosyltransferase [C 98.9 2.9E-08 6.2E-13 104.8 14.9 315 165-541 122-459 (465)
130 PRK00025 lpxB lipid-A-disaccha 98.9 7.2E-08 1.6E-12 109.0 19.3 141 319-509 176-344 (380)
131 PF13692 Glyco_trans_1_4: Glyc 98.8 4.9E-09 1.1E-13 100.1 7.0 128 326-505 2-134 (135)
132 PRK13288 pyrophosphatase PpaX; 98.8 2.5E-09 5.4E-14 111.1 4.6 68 751-832 139-212 (214)
133 COG0546 Gph Predicted phosphat 98.8 4.4E-09 9.6E-14 109.8 5.9 84 731-832 130-219 (220)
134 PRK11133 serB phosphoserine ph 98.8 9.5E-08 2.1E-12 104.9 16.0 65 750-831 247-316 (322)
135 KOG3189 Phosphomannomutase [Li 98.8 1.1E-07 2.4E-12 92.9 13.9 221 579-834 5-250 (252)
136 PF03332 PMM: Eukaryotic phosp 98.8 1E-07 2.2E-12 96.5 13.9 193 610-834 1-219 (220)
137 TIGR02726 phenyl_P_delta pheny 98.7 1.4E-08 3.1E-13 100.9 6.8 138 584-836 6-157 (169)
138 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.7 1.8E-07 3.9E-12 100.0 15.1 65 752-830 181-254 (257)
139 PRK09814 beta-1,6-galactofuran 98.7 3.1E-07 6.8E-12 102.2 17.1 249 183-533 58-324 (333)
140 cd01427 HAD_like Haloacid deha 98.7 2.4E-08 5.1E-13 94.6 6.8 54 587-641 1-59 (139)
141 PRK13226 phosphoglycolate phos 98.7 1.4E-08 3E-13 106.8 5.0 66 752-831 153-225 (229)
142 PRK10444 UMP phosphatase; Prov 98.7 4E-07 8.6E-12 96.7 16.1 59 585-648 1-59 (248)
143 PRK13225 phosphoglycolate phos 98.7 4.7E-08 1E-12 105.3 8.8 71 751-835 196-272 (273)
144 TIGR03713 acc_sec_asp1 accesso 98.7 8.2E-07 1.8E-11 103.8 19.7 255 172-508 203-490 (519)
145 COG1778 Low specificity phosph 98.7 2.4E-08 5.2E-13 94.5 5.2 71 751-836 83-158 (170)
146 PRK13223 phosphoglycolate phos 98.6 3.1E-08 6.8E-13 106.8 5.3 71 747-831 154-230 (272)
147 PRK13222 phosphoglycolate phos 98.6 3.6E-08 7.8E-13 103.1 5.1 67 752-832 151-223 (226)
148 TIGR01452 PGP_euk phosphoglyco 98.6 7E-07 1.5E-11 96.8 14.4 59 585-648 2-60 (279)
149 PF05693 Glycogen_syn: Glycoge 98.5 7.5E-06 1.6E-10 94.1 21.4 353 143-537 100-578 (633)
150 cd04299 GT1_Glycogen_Phosphory 98.5 4.4E-06 9.5E-11 100.9 20.6 182 327-540 479-689 (778)
151 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.5 1.5E-06 3.2E-11 92.6 14.5 53 585-642 1-56 (249)
152 PLN02645 phosphoglycolate phos 98.5 1.1E-06 2.3E-11 96.8 12.0 60 584-648 27-86 (311)
153 TIGR01449 PGP_bact 2-phosphogl 98.4 9.8E-08 2.1E-12 98.8 2.9 64 752-829 143-212 (213)
154 TIGR00338 serB phosphoserine p 98.4 8.5E-07 1.8E-11 92.4 9.8 62 751-829 152-218 (219)
155 COG0560 SerB Phosphoserine pho 98.4 8.3E-07 1.8E-11 91.8 9.3 42 748-792 141-182 (212)
156 PRK13478 phosphonoacetaldehyde 98.4 2.1E-06 4.6E-11 92.4 12.5 72 752-837 160-261 (267)
157 PRK06769 hypothetical protein; 98.4 8.3E-07 1.8E-11 89.1 7.8 65 752-830 95-171 (173)
158 PLN02770 haloacid dehalogenase 98.4 6.2E-07 1.3E-11 95.5 6.9 77 731-825 149-230 (248)
159 PRK11587 putative phosphatase; 98.3 1.2E-06 2.5E-11 91.4 8.2 61 752-826 140-203 (218)
160 TIGR03351 PhnX-like phosphonat 98.3 5.8E-07 1.3E-11 93.7 5.8 65 752-830 147-219 (220)
161 PRK08942 D,D-heptose 1,7-bisph 98.3 3E-06 6.5E-11 85.7 10.8 66 752-831 105-177 (181)
162 smart00775 LNS2 LNS2 domain. T 98.3 5.8E-07 1.3E-11 88.5 5.3 52 587-642 1-66 (157)
163 PRK10826 2-deoxyglucose-6-phos 98.3 8.6E-07 1.9E-11 92.6 6.2 63 751-827 149-216 (222)
164 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 5.3E-06 1.2E-10 84.9 11.8 38 751-791 147-184 (201)
165 TIGR01422 phosphonatase phosph 98.3 4.8E-06 1.1E-10 88.8 11.8 65 752-830 158-252 (253)
166 PLN02575 haloacid dehalogenase 98.3 1.1E-06 2.3E-11 97.9 6.9 90 731-838 257-350 (381)
167 PLN03243 haloacid dehalogenase 98.3 1.7E-06 3.7E-11 92.5 7.9 87 731-836 150-241 (260)
168 TIGR00215 lpxB lipid-A-disacch 98.3 5.2E-05 1.1E-09 86.1 19.9 134 325-507 190-348 (385)
169 TIGR01454 AHBA_synth_RP 3-amin 98.3 1.2E-06 2.5E-11 90.4 5.9 66 752-831 133-204 (205)
170 TIGR00213 GmhB_yaeD D,D-heptos 98.2 7.8E-06 1.7E-10 82.3 11.2 63 752-827 108-175 (176)
171 PLN02954 phosphoserine phospha 98.2 1.8E-06 3.8E-11 90.3 6.7 66 748-830 152-223 (224)
172 COG1519 KdtA 3-deoxy-D-manno-o 98.2 0.00075 1.6E-08 74.9 25.2 300 173-525 32-404 (419)
173 TIGR01488 HAD-SF-IB Haloacid D 98.1 3.9E-06 8.5E-11 84.1 7.0 41 746-789 137-177 (177)
174 PLN02779 haloacid dehalogenase 98.1 5.5E-06 1.2E-10 90.1 7.6 62 752-827 204-269 (286)
175 TIGR01662 HAD-SF-IIIA HAD-supe 98.1 9.8E-06 2.1E-10 77.3 7.5 46 586-632 1-51 (132)
176 TIGR01672 AphA HAD superfamily 98.1 1.5E-05 3.4E-10 83.5 9.4 33 567-599 45-77 (237)
177 TIGR01689 EcbF-BcbF capsule bi 98.0 6.9E-06 1.5E-10 77.3 5.6 51 586-637 2-55 (126)
178 PRK13582 thrH phosphoserine ph 98.0 1.5E-05 3.1E-10 82.1 8.3 54 768-835 142-200 (205)
179 TIGR02253 CTE7 HAD superfamily 98.0 1E-05 2.2E-10 84.3 5.8 61 752-826 152-220 (221)
180 TIGR01664 DNA-3'-Pase DNA 3'-p 97.9 4.2E-05 9E-10 76.2 9.6 50 582-632 10-68 (166)
181 PF13524 Glyco_trans_1_2: Glyc 97.9 9.5E-06 2.1E-10 72.2 4.5 88 425-536 1-92 (92)
182 PRK09552 mtnX 2-hydroxy-3-keto 97.9 7.7E-05 1.7E-09 77.8 11.9 65 750-835 147-217 (219)
183 TIGR01656 Histidinol-ppas hist 97.9 4.9E-05 1.1E-09 74.1 8.9 38 752-792 103-140 (147)
184 PRK06698 bifunctional 5'-methy 97.9 1.1E-05 2.3E-10 93.9 4.5 67 751-833 386-456 (459)
185 PHA02597 30.2 hypothetical pro 97.8 2.7E-05 5.8E-10 79.7 6.4 60 752-827 132-195 (197)
186 TIGR02919 accessory Sec system 97.8 0.00011 2.4E-09 84.1 11.8 122 342-508 291-413 (438)
187 TIGR01681 HAD-SF-IIIC HAD-supe 97.8 4.2E-05 9.1E-10 72.7 7.0 54 586-640 1-64 (128)
188 TIGR01684 viral_ppase viral ph 97.8 3.4E-05 7.3E-10 82.1 6.3 56 583-642 124-182 (301)
189 PRK14988 GMP/IMP nucleotidase; 97.8 3.3E-05 7.1E-10 81.0 5.8 69 752-833 151-221 (224)
190 PRK09449 dUMP phosphatase; Pro 97.7 3E-05 6.6E-10 80.9 5.1 66 752-831 152-223 (224)
191 TIGR01261 hisB_Nterm histidino 97.7 0.00015 3.2E-09 71.9 9.5 38 752-792 105-142 (161)
192 PHA02530 pseT polynucleotide k 97.7 0.00015 3.3E-09 79.3 10.2 55 585-640 158-221 (300)
193 PLN02940 riboflavin kinase 97.7 1.6E-05 3.5E-10 89.9 2.2 77 733-827 137-217 (382)
194 PRK10563 6-phosphogluconate ph 97.7 1.6E-05 3.4E-10 83.0 1.8 38 752-792 144-181 (221)
195 COG0647 NagD Predicted sugar p 97.7 0.0012 2.5E-08 70.5 15.8 52 584-640 7-58 (269)
196 TIGR01668 YqeG_hyp_ppase HAD s 97.7 0.00036 7.8E-09 69.8 11.1 48 582-632 22-69 (170)
197 PRK11009 aphA acid phosphatase 97.5 0.00069 1.5E-08 71.2 11.8 64 568-632 46-140 (237)
198 TIGR01685 MDP-1 magnesium-depe 97.5 0.00042 9E-09 69.3 8.9 55 585-640 2-80 (174)
199 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.4 0.0032 6.9E-08 66.8 15.6 48 584-636 7-54 (242)
200 PRK10725 fructose-1-P/6-phosph 97.4 0.0001 2.3E-09 74.6 4.1 37 752-791 144-180 (188)
201 TIGR01460 HAD-SF-IIA Haloacid 97.4 0.0021 4.6E-08 67.8 14.1 49 588-641 1-52 (236)
202 PHA03398 viral phosphatase sup 97.4 0.00024 5.2E-09 75.7 6.2 55 584-642 127-184 (303)
203 TIGR02254 YjjG/YfnB HAD superf 97.4 0.00046 9.9E-09 71.8 8.1 66 752-830 154-224 (224)
204 TIGR01990 bPGM beta-phosphoglu 97.3 0.00026 5.7E-09 71.3 4.6 37 752-791 143-179 (185)
205 PRK11590 hypothetical protein; 97.2 0.00098 2.1E-08 69.1 8.5 26 767-792 173-198 (211)
206 TIGR01489 DKMTPPase-SF 2,3-dik 97.2 0.0011 2.3E-08 67.0 8.2 39 747-791 145-183 (188)
207 TIGR01548 HAD-SF-IA-hyp1 haloa 97.2 0.00019 4.2E-09 73.4 2.7 35 752-789 163-197 (197)
208 TIGR02009 PGMB-YQAB-SF beta-ph 97.2 0.00017 3.7E-09 72.7 2.2 37 752-791 144-180 (185)
209 PLN02919 haloacid dehalogenase 97.1 0.0005 1.1E-08 87.3 6.2 75 734-826 206-285 (1057)
210 TIGR01549 HAD-SF-IA-v1 haloaci 97.1 0.00041 8.9E-09 67.8 4.3 35 752-790 120-154 (154)
211 PRK05446 imidazole glycerol-ph 97.1 0.0028 6.2E-08 70.4 11.1 48 584-632 1-56 (354)
212 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0018 3.8E-08 77.3 9.7 63 578-641 357-420 (556)
213 PF06437 ISN1: IMP-specific 5' 97.1 0.023 5.1E-07 62.1 16.9 211 565-785 123-389 (408)
214 TIGR01686 FkbH FkbH-like domai 97.1 0.002 4.4E-08 71.2 9.3 114 584-790 2-123 (320)
215 TIGR02252 DREG-2 REG-2-like, H 97.0 0.00024 5.2E-09 72.9 0.7 37 752-791 162-199 (203)
216 TIGR02247 HAD-1A3-hyp Epoxide 96.9 0.0031 6.8E-08 65.1 8.8 56 752-834 154-209 (211)
217 PRK10671 copA copper exporting 96.8 0.0045 9.8E-08 77.4 10.4 63 577-640 622-684 (834)
218 TIGR01512 ATPase-IB2_Cd heavy 96.7 0.0033 7.2E-08 74.6 8.1 58 583-641 340-398 (536)
219 TIGR01511 ATPase-IB1_Cu copper 96.6 0.0075 1.6E-07 71.9 9.8 58 582-640 382-439 (562)
220 PF13242 Hydrolase_like: HAD-h 96.6 0.0045 9.8E-08 52.8 5.6 61 752-826 6-75 (75)
221 COG1011 Predicted hydrolase (H 96.5 0.0018 3.8E-08 67.6 3.1 64 753-832 157-228 (229)
222 TIGR01522 ATPase-IIA2_Ca golgi 96.5 0.018 4E-07 72.4 12.6 69 577-649 495-568 (884)
223 smart00577 CPDc catalytic doma 96.4 0.0025 5.4E-08 62.2 3.5 32 757-791 105-136 (148)
224 TIGR01456 CECR5 HAD-superfamil 96.4 0.24 5.2E-06 54.8 19.5 41 587-632 2-46 (321)
225 COG0241 HisB Histidinol phosph 96.4 0.061 1.3E-06 53.9 13.1 38 752-792 107-144 (181)
226 PRK08238 hypothetical protein; 96.4 0.011 2.3E-07 68.8 9.0 21 771-791 140-160 (479)
227 TIGR01497 kdpB K+-transporting 96.4 0.017 3.6E-07 69.6 10.7 66 575-641 416-481 (675)
228 COG0637 Predicted phosphatase/ 96.3 0.0035 7.5E-08 65.5 4.1 54 732-792 128-181 (221)
229 PF13344 Hydrolase_6: Haloacid 96.3 0.0013 2.8E-08 59.8 0.7 56 588-648 1-56 (101)
230 TIGR01993 Pyr-5-nucltdase pyri 96.3 0.0013 2.9E-08 66.3 0.8 37 752-791 143-179 (184)
231 KOG3120 Predicted haloacid deh 96.3 0.019 4.2E-07 58.0 8.9 44 741-784 153-196 (256)
232 TIGR01663 PNK-3'Pase polynucle 96.3 0.015 3.3E-07 67.9 9.5 49 583-632 166-223 (526)
233 PRK11033 zntA zinc/cadmium/mer 96.2 0.016 3.4E-07 71.4 9.5 63 578-641 541-603 (741)
234 PF00702 Hydrolase: haloacid d 96.2 0.0086 1.9E-07 61.5 6.1 35 605-640 127-161 (215)
235 COG2179 Predicted hydrolase of 96.2 0.012 2.5E-07 57.2 6.4 58 581-641 24-81 (175)
236 TIGR01106 ATPase-IIC_X-K sodiu 95.9 0.026 5.6E-07 71.9 10.0 44 603-650 566-609 (997)
237 COG4087 Soluble P-type ATPase 95.9 0.012 2.6E-07 54.6 4.9 54 767-833 90-149 (152)
238 TIGR01116 ATPase-IIA1_Ca sarco 95.7 0.037 7.9E-07 70.0 10.0 43 603-649 535-577 (917)
239 KOG1615 Phosphoserine phosphat 95.6 0.0051 1.1E-07 60.9 1.3 59 751-827 159-222 (227)
240 KOG3040 Predicted sugar phosph 95.6 0.26 5.6E-06 49.7 13.1 61 583-648 5-65 (262)
241 TIGR01657 P-ATPase-V P-type AT 95.5 0.13 2.7E-06 66.2 13.5 46 604-653 655-700 (1054)
242 TIGR01517 ATPase-IIB_Ca plasma 95.4 0.074 1.6E-06 67.5 11.1 138 603-830 577-721 (941)
243 PTZ00445 p36-lilke protein; Pr 95.4 0.024 5.3E-07 57.6 5.4 157 573-791 31-199 (219)
244 PF12710 HAD: haloacid dehalog 95.4 0.031 6.7E-07 56.4 6.4 32 608-640 92-123 (192)
245 PRK01122 potassium-transportin 95.2 0.08 1.7E-06 64.0 9.8 64 577-641 417-480 (679)
246 PF02684 LpxB: Lipid-A-disacch 95.1 0.95 2.1E-05 51.0 17.6 259 178-509 73-343 (373)
247 KOG2941 Beta-1,4-mannosyltrans 95.1 0.45 9.8E-06 51.6 13.8 168 325-538 254-436 (444)
248 KOG0210 P-type ATPase [Inorgan 95.0 0.21 4.6E-06 58.3 12.0 174 603-831 656-833 (1051)
249 TIGR01652 ATPase-Plipid phosph 95.0 0.083 1.8E-06 67.9 10.0 185 603-830 629-819 (1057)
250 PRK14010 potassium-transportin 94.8 0.11 2.5E-06 62.6 9.7 67 574-641 410-476 (673)
251 TIGR02137 HSK-PSP phosphoserin 94.7 0.073 1.6E-06 54.8 6.8 65 748-833 129-198 (203)
252 TIGR01675 plant-AP plant acid 94.6 0.049 1.1E-06 56.8 5.2 51 584-635 76-149 (229)
253 PF08645 PNK3P: Polynucleotide 94.6 0.017 3.7E-07 57.0 1.8 46 586-632 1-55 (159)
254 COG0763 LpxB Lipid A disacchar 94.6 0.76 1.6E-05 51.1 14.5 277 167-537 69-377 (381)
255 PLN03190 aminophospholipid tra 94.5 0.25 5.3E-06 63.8 12.3 46 603-652 724-769 (1178)
256 TIGR01490 HAD-SF-IB-hyp1 HAD-s 94.4 0.04 8.6E-07 56.4 4.0 42 748-792 152-193 (202)
257 PRK10517 magnesium-transportin 94.3 0.31 6.6E-06 61.5 12.3 42 603-648 548-589 (902)
258 PF13439 Glyco_transf_4: Glyco 94.3 0.009 1.9E-07 58.7 -1.0 99 181-304 73-177 (177)
259 PF09419 PGP_phosphatase: Mito 94.2 0.06 1.3E-06 53.4 4.6 60 566-630 24-85 (168)
260 PF08323 Glyco_transf_5: Starc 94.2 0.2 4.4E-06 53.2 9.1 91 170-263 114-232 (245)
261 TIGR01523 ATPase-IID_K-Na pota 94.0 0.19 4.1E-06 64.3 9.7 44 603-650 644-687 (1053)
262 TIGR01524 ATPase-IIIB_Mg magne 93.9 0.38 8.2E-06 60.5 12.1 42 603-648 513-554 (867)
263 TIGR01647 ATPase-IIIA_H plasma 93.9 0.23 5E-06 61.4 9.9 167 578-831 410-587 (755)
264 PRK15122 magnesium-transportin 93.8 0.34 7.4E-06 61.1 11.4 137 603-831 548-690 (903)
265 TIGR03492 conserved hypothetic 93.6 0.78 1.7E-05 52.4 13.1 139 327-508 208-366 (396)
266 PF08235 LNS2: LNS2 (Lipin/Ned 93.3 0.087 1.9E-06 51.5 3.9 55 587-642 1-66 (157)
267 TIGR01533 lipo_e_P4 5'-nucleot 93.3 0.072 1.6E-06 57.0 3.6 54 583-637 73-149 (266)
268 PF11019 DUF2608: Protein of u 93.3 0.71 1.5E-05 49.2 11.2 57 746-812 157-213 (252)
269 COG2217 ZntA Cation transport 93.3 0.39 8.4E-06 58.3 10.1 138 577-831 509-652 (713)
270 COG4359 Uncharacterized conser 93.1 0.38 8.1E-06 47.6 7.9 40 746-792 142-181 (220)
271 TIGR01494 ATPase_P-type ATPase 93.1 0.29 6.3E-06 57.7 8.8 59 582-641 324-382 (499)
272 COG0474 MgtA Cation transport 92.6 0.46 1E-05 60.1 10.0 40 602-642 544-583 (917)
273 TIGR01680 Veg_Stor_Prot vegeta 92.3 0.18 3.8E-06 53.7 4.9 50 585-635 101-174 (275)
274 cd03784 GT1_Gtf_like This fami 91.8 8.1 0.00018 43.8 18.3 73 405-505 290-371 (401)
275 TIGR03333 salvage_mtnX 2-hydro 91.7 0.28 6E-06 50.9 5.5 64 750-834 143-212 (214)
276 COG0381 WecB UDP-N-acetylgluco 91.6 20 0.00044 40.2 20.0 138 326-510 205-345 (383)
277 PF03767 Acid_phosphat_B: HAD 91.6 0.031 6.8E-07 58.6 -1.8 65 583-648 70-157 (229)
278 PLN02811 hydrolase 91.4 0.24 5.3E-06 51.5 4.8 60 752-825 139-205 (220)
279 PRK10748 flavin mononucleotide 91.4 0.32 6.9E-06 51.3 5.6 65 752-830 165-238 (238)
280 TIGR03568 NeuC_NnaA UDP-N-acet 90.9 12 0.00025 42.3 18.0 72 404-505 263-338 (365)
281 PF06888 Put_Phosphatase: Puta 90.9 0.48 1E-05 49.7 6.3 46 746-791 145-190 (234)
282 PF02350 Epimerase_2: UDP-N-ac 89.8 38 0.00082 37.9 22.3 260 171-506 51-318 (346)
283 PF13844 Glyco_transf_41: Glyc 89.8 1.6 3.4E-05 50.4 9.7 130 295-445 249-383 (468)
284 KOG0206 P-type ATPase [General 88.9 3.7 8.1E-05 52.2 12.7 40 746-791 776-815 (1151)
285 KOG0208 Cation transport ATPas 87.9 1.1 2.4E-05 54.8 7.0 46 604-653 704-749 (1140)
286 PF12689 Acid_PPase: Acid Phos 87.8 0.42 9.1E-06 47.6 3.0 45 741-790 100-144 (169)
287 PRK10748 flavin mononucleotide 87.1 0.31 6.7E-06 51.5 1.7 31 584-617 9-39 (238)
288 PF13579 Glyco_trans_4_4: Glyc 86.9 0.57 1.2E-05 44.8 3.3 67 192-263 75-146 (160)
289 COG4030 Uncharacterized protei 86.5 2.4 5.2E-05 43.4 7.4 37 752-792 192-228 (315)
290 PF05152 DUF705: Protein of un 86.1 1.8 3.9E-05 46.1 6.6 58 583-641 120-177 (297)
291 KOG0202 Ca2+ transporting ATPa 85.7 4.8 0.0001 48.8 10.5 52 582-641 568-619 (972)
292 PRK09456 ?-D-glucose-1-phospha 85.4 0.94 2E-05 46.2 4.2 37 752-791 143-179 (199)
293 PF07429 Glyco_transf_56: 4-al 84.9 7.1 0.00015 43.0 10.6 141 325-503 184-330 (360)
294 TIGR03333 salvage_mtnX 2-hydro 84.6 0.97 2.1E-05 46.8 3.9 35 607-642 72-106 (214)
295 TIGR01490 HAD-SF-IB-hyp1 HAD-s 84.5 1.1 2.5E-05 45.5 4.3 34 607-641 89-122 (202)
296 PF03031 NIF: NLI interacting 84.1 0.43 9.3E-06 46.8 0.9 56 586-643 1-72 (159)
297 TIGR01428 HAD_type_II 2-haloal 83.9 1.3 2.8E-05 45.0 4.4 38 752-792 150-187 (198)
298 PF13419 HAD_2: Haloacid dehal 83.7 1.5 3.3E-05 42.7 4.8 38 752-792 135-172 (176)
299 COG3700 AphA Acid phosphatase 83.6 1.3 2.7E-05 43.7 3.8 72 568-639 46-147 (237)
300 PF06258 Mito_fiss_Elm1: Mitoc 83.6 7.8 0.00017 42.7 10.5 37 406-446 213-249 (311)
301 COG3882 FkbH Predicted enzyme 83.5 2.1 4.6E-05 48.6 6.0 73 572-645 209-294 (574)
302 KOG3109 Haloacid dehalogenase- 83.2 1.6 3.4E-05 44.7 4.5 73 741-833 155-230 (244)
303 TIGR01509 HAD-SF-IA-v3 haloaci 82.5 1.4 3E-05 43.8 4.0 37 752-791 142-178 (183)
304 TIGR02245 HAD_IIID1 HAD-superf 82.2 2.1 4.6E-05 43.6 5.1 57 583-641 19-79 (195)
305 TIGR01426 MGT glycosyltransfer 81.8 11 0.00025 42.6 11.6 76 405-508 277-361 (392)
306 KOG3742 Glycogen synthase [Car 81.0 23 0.00049 40.1 12.6 72 415-507 493-579 (692)
307 TIGR02251 HIF-SF_euk Dullard-l 80.4 1.8 4E-05 42.8 3.8 25 767-791 109-133 (162)
308 TIGR03590 PseG pseudaminic aci 80.4 6.5 0.00014 42.5 8.5 92 325-447 170-261 (279)
309 PF06941 NT5C: 5' nucleotidase 80.3 1.3 2.7E-05 45.1 2.7 28 606-634 74-101 (191)
310 TIGR01544 HAD-SF-IE haloacid d 80.3 1.6 3.5E-05 47.0 3.6 38 749-789 190-230 (277)
311 KOG0207 Cation transport ATPas 80.3 9.5 0.00021 46.9 10.2 67 573-640 691-757 (951)
312 TIGR01545 YfhB_g-proteo haloac 79.5 2.1 4.5E-05 44.3 4.1 38 749-792 160-197 (210)
313 TIGR02250 FCP1_euk FCP1-like p 79.1 2.2 4.9E-05 41.9 4.0 60 582-643 3-94 (156)
314 TIGR01691 enolase-ppase 2,3-di 78.8 3.7 8.1E-05 42.8 5.7 38 752-792 154-191 (220)
315 COG0707 MurG UDP-N-acetylgluco 78.8 48 0.001 37.3 14.9 82 414-522 244-338 (357)
316 PRK02797 4-alpha-L-fucosyltran 76.7 28 0.0006 38.0 11.5 125 325-488 145-272 (322)
317 COG5083 SMP2 Uncharacterized p 76.0 1.6 3.6E-05 48.6 2.1 67 582-655 372-449 (580)
318 COG4996 Predicted phosphatase 74.6 4.1 8.9E-05 38.2 4.0 14 586-599 1-14 (164)
319 TIGR01428 HAD_type_II 2-haloal 74.6 2.4 5.2E-05 43.0 2.9 14 585-598 1-14 (198)
320 TIGR01493 HAD-SF-IA-v2 Haloaci 72.7 1.3 2.9E-05 43.8 0.5 34 752-788 141-174 (175)
321 PF13528 Glyco_trans_1_3: Glyc 70.3 64 0.0014 35.1 13.2 67 411-502 239-316 (318)
322 COG0816 Predicted endonuclease 70.3 21 0.00045 34.5 7.9 72 344-425 41-112 (141)
323 TIGR01545 YfhB_g-proteo haloac 70.3 3.5 7.7E-05 42.6 3.0 15 584-598 4-18 (210)
324 KOG0203 Na+/K+ ATPase, alpha s 69.6 12 0.00026 45.6 7.3 39 608-650 593-631 (1019)
325 KOG2116 Protein involved in pl 69.0 4.7 0.0001 47.4 3.8 76 583-659 528-614 (738)
326 TIGR01493 HAD-SF-IA-v2 Haloaci 69.0 3.9 8.5E-05 40.4 2.9 24 587-617 1-24 (175)
327 PF00343 Phosphorylase: Carboh 65.3 1.2E+02 0.0025 37.2 14.5 134 325-482 443-582 (713)
328 TIGR02137 HSK-PSP phosphoserin 64.5 3.3 7.3E-05 42.6 1.4 13 586-598 2-14 (203)
329 KOG2914 Predicted haloacid-hal 64.4 8.7 0.00019 40.0 4.4 38 752-792 153-191 (222)
330 PF06888 Put_Phosphatase: Puta 64.4 9.6 0.00021 40.1 4.7 14 587-600 2-15 (234)
331 COG3660 Predicted nucleoside-d 60.5 61 0.0013 34.5 9.5 52 192-260 72-123 (329)
332 KOG2134 Polynucleotide kinase 59.3 7.8 0.00017 43.1 3.0 49 583-632 73-130 (422)
333 COG3914 Spy Predicted O-linked 58.3 88 0.0019 36.9 11.3 100 327-445 431-530 (620)
334 COG4641 Uncharacterized protei 57.9 22 0.00048 39.6 6.3 116 404-541 239-362 (373)
335 KOG0204 Calcium transporting A 57.3 35 0.00075 41.9 8.1 36 605-641 647-682 (1034)
336 PRK14986 glycogen phosphorylas 56.6 1.4E+02 0.0031 37.0 13.4 136 325-482 542-681 (815)
337 KOG1618 Predicted phosphatase 55.6 8.7 0.00019 41.6 2.6 42 585-631 35-80 (389)
338 PF00702 Hydrolase: haloacid d 54.9 4.2 9E-05 41.4 0.1 34 754-790 182-215 (215)
339 COG2503 Predicted secreted aci 54.8 10 0.00022 39.6 2.8 58 582-640 76-157 (274)
340 PF12000 Glyco_trans_4_3: Gkyc 53.2 92 0.002 31.1 9.3 50 168-221 42-95 (171)
341 KOG3085 Predicted hydrolase (H 51.4 14 0.00031 38.8 3.4 38 752-792 170-208 (237)
342 TIGR01509 HAD-SF-IA-v3 haloaci 49.1 7.4 0.00016 38.5 0.9 12 587-598 1-12 (183)
343 PF12710 HAD: haloacid dehalog 48.9 9.3 0.0002 38.2 1.5 36 751-787 157-192 (192)
344 PRK09456 ?-D-glucose-1-phospha 48.9 9.3 0.0002 38.8 1.6 13 586-598 1-13 (199)
345 PF13419 HAD_2: Haloacid dehal 48.5 7.5 0.00016 37.7 0.8 35 754-791 105-144 (176)
346 KOG2882 p-Nitrophenyl phosphat 47.0 13 0.00029 40.1 2.3 60 584-648 21-80 (306)
347 KOG2884 26S proteasome regulat 45.5 2.4E+02 0.0051 29.2 10.6 46 468-517 186-236 (259)
348 PF09949 DUF2183: Uncharacteri 45.3 53 0.0011 29.7 5.6 36 342-381 49-84 (100)
349 PF04312 DUF460: Protein of un 45.0 22 0.00048 33.9 3.2 53 584-640 42-96 (138)
350 COG2179 Predicted hydrolase of 44.5 21 0.00045 35.3 3.0 37 752-791 95-132 (175)
351 PF13477 Glyco_trans_4_2: Glyc 44.4 29 0.00062 32.5 4.1 40 181-222 67-107 (139)
352 COG4822 CbiK Cobalamin biosynt 43.8 3.9E+02 0.0085 27.7 14.8 155 224-425 32-193 (265)
353 COG4087 Soluble P-type ATPase 43.3 14 0.0003 34.9 1.6 48 588-641 17-64 (152)
354 cd04300 GT1_Glycogen_Phosphory 42.5 3.6E+02 0.0079 33.7 13.8 136 325-482 529-668 (797)
355 TIGR00250 RNAse_H_YqgF RNAse H 41.5 1.1E+02 0.0024 29.0 7.5 70 343-422 35-104 (130)
356 PRK00109 Holliday junction res 40.7 2E+02 0.0044 27.5 9.3 69 345-423 43-111 (138)
357 PF09419 PGP_phosphatase: Mito 39.8 60 0.0013 32.4 5.6 43 749-791 113-158 (168)
358 PF04464 Glyphos_transf: CDP-G 39.0 2.6E+02 0.0057 31.2 11.5 235 194-509 81-339 (369)
359 cd01570 NAPRTase_A Nicotinate 35.9 3E+02 0.0064 30.6 10.9 89 316-422 208-298 (327)
360 PLN02177 glycerol-3-phosphate 35.6 42 0.00091 39.5 4.4 35 751-792 176-210 (497)
361 KOG1050 Trehalose-6-phosphate 35.6 4.4 9.6E-05 49.5 -3.7 51 739-789 369-422 (732)
362 PLN00414 glycosyltransferase f 33.2 4.4E+02 0.0095 30.6 12.2 109 407-541 316-441 (446)
363 COG1168 MalY Bifunctional PLP- 32.5 7.5E+02 0.016 28.0 13.0 79 361-441 158-240 (388)
364 PHA03392 egt ecdysteroid UDP-g 29.6 4.9E+02 0.011 30.8 12.0 79 404-508 347-434 (507)
365 COG0058 GlgP Glucan phosphoryl 29.3 4E+02 0.0087 33.0 11.1 130 325-482 486-616 (750)
366 TIGR02093 P_ylase glycogen/sta 28.2 4.8E+02 0.01 32.6 11.6 136 325-482 526-665 (794)
367 smart00775 LNS2 LNS2 domain. T 28.2 1.1E+02 0.0023 30.1 5.2 40 751-792 102-141 (157)
368 PRK14985 maltodextrin phosphor 27.8 2.5E+02 0.0054 34.9 9.2 136 325-482 528-667 (798)
369 KOG0331 ATP-dependent RNA heli 26.7 3.5E+02 0.0077 31.9 9.8 94 329-432 131-225 (519)
370 KOG4549 Magnesium-dependent ph 26.7 84 0.0018 29.6 3.8 51 585-636 18-74 (144)
371 PLN02177 glycerol-3-phosphate 25.3 45 0.00097 39.3 2.3 15 585-599 22-36 (497)
372 TIGR01513 NAPRTase_put putativ 25.3 6.8E+02 0.015 29.1 11.8 106 315-439 207-323 (443)
373 KOG4626 O-linked N-acetylgluco 25.3 3.9E+02 0.0085 32.1 9.5 85 341-445 772-857 (966)
374 PRK04128 1-(5-phosphoribosyl)- 24.8 1.2E+02 0.0027 31.7 5.2 61 572-640 31-92 (228)
375 KOG2670 Enolase [Carbohydrate 24.4 49 0.0011 36.0 2.1 41 128-178 272-312 (433)
376 KOG3085 Predicted hydrolase (H 24.2 69 0.0015 33.8 3.2 16 583-598 5-20 (237)
377 COG1819 Glycosyl transferases, 23.7 5.7E+02 0.012 29.3 10.8 100 406-537 287-397 (406)
378 PRK10422 lipopolysaccharide co 23.3 6.9E+02 0.015 27.7 11.4 88 324-430 182-270 (352)
379 KOG2648 Diphthamide biosynthes 23.1 2.8E+02 0.006 31.9 7.8 43 314-371 286-328 (453)
380 COG2248 Predicted hydrolase (m 23.1 9.5E+02 0.021 25.7 13.0 37 324-371 174-211 (304)
381 TIGR00661 MJ1255 conserved hyp 22.8 97 0.0021 34.0 4.3 67 414-506 239-314 (321)
382 PRK05632 phosphate acetyltrans 20.4 1.6E+03 0.036 27.5 16.6 175 410-640 233-418 (684)
383 PRK12581 oxaloacetate decarbox 20.2 1.4E+03 0.031 26.7 13.9 105 325-445 145-256 (468)
384 PRK14042 pyruvate carboxylase 20.1 1.3E+03 0.029 27.8 13.2 94 336-445 148-247 (596)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=3.5e-184 Score=1644.45 Aligned_cols=836 Identities=66% Similarity=1.139 Sum_probs=781.1
Q ss_pred ccccccccccc--cCCCCcc-CCCccccccCccccccccCC-CCCC---CCCCCCCCcEEEEEcCCccceEEeCCC-Cce
Q 003042 2 RSSLDLLNLIS--FDDFGTL-NRIPGVMKVPGVISEFENKS-NDGT---TTIVEPCQRRIIVANQLPVKAYYEKDS-NKW 73 (854)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~iivsnrlP~~~~~~~~~-~~~ 73 (854)
|||+|||||++ +..++++ |++|++|++||+++++++++ ++.+ +++..+.+|+||||||||+.++++++| ++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~~~~ 83 (854)
T PLN02205 4 RSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGW 83 (854)
T ss_pred hhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCCcce
Confidence 79999999999 5677776 99999999999999999876 3332 346677789999999999999987554 589
Q ss_pred EEEecCCchhhhhhccCCC-CCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCChhhhhhhhcccccccccccccc
Q 003042 74 GFEYDQDSLYLQLKDGFPL-ETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHY 152 (854)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwp~~H~ 152 (854)
+|++++|||+++|++++.. ..+++||||+|.++++++|+++.+.++++|+|+|||+++++++.||+||||++|||+|||
T Consensus 84 ~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~ 163 (854)
T PLN02205 84 IFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHY 163 (854)
T ss_pred EEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhcc
Confidence 9999999999999988864 378999999998888888888878888899999999999999999999999999999999
Q ss_pred cCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhh
Q 003042 153 MLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR 232 (854)
Q Consensus 153 ~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~ 232 (854)
+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||++|+||
T Consensus 164 ~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr 243 (854)
T PLN02205 164 MLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243 (854)
T ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHh
Confidence 98888877779999999999999999999999999986799999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchH
Q 003042 233 TLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVT 312 (854)
Q Consensus 233 ~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~ 312 (854)
+||+|+|||+|||+||+|||||++|+|||++||+|+||++++..+|+++++|+||+++|+++|+|||++.|...+..|++
T Consensus 244 ~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred hCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 99999999999999999999999999999999999999999988888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC--CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 003042 313 GQKVKELKEKFD--GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (854)
Q Consensus 313 ~~~~~~l~~~~~--~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~ 390 (854)
.+++++++++++ |+++|+||||+|++|||.+||+||++||++||+|+||++||||++|+|+++++|++++++++++|+
T Consensus 324 ~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~ 403 (854)
T PLN02205 324 EAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403 (854)
T ss_pred HHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence 999999999995 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceE
Q 003042 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (854)
Q Consensus 391 ~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (854)
+||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||++||++++.++++++.++++ +++|+|
T Consensus 404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~--~~~gvL 481 (854)
T PLN02205 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPST--PKKSML 481 (854)
T ss_pred HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccccc--CCCCce
Confidence 999999999999999999999999999999999999999999999999999999999887777777766654 468999
Q ss_pred EEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHhcccccc
Q 003042 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDHLFKRC 550 (854)
Q Consensus 471 V~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~ 550 (854)
|+|||+||+++|++|++|||||++++|+||.+||+||++||+.|+++++++|++||+.+|+++||++|.++|+++.+++|
T Consensus 482 iLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~ 561 (854)
T PLN02205 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRC 561 (854)
T ss_pred EeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred cccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcC
Q 003042 551 WGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG 630 (854)
Q Consensus 551 ~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TG 630 (854)
|++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....++++++++|++||.++|+.|+|+||
T Consensus 562 ~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSG 641 (854)
T PLN02205 562 WGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSA 641 (854)
T ss_pred cccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999854445688999999999999999999999999
Q ss_pred CCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCC
Q 003042 631 RGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHAD 710 (854)
Q Consensus 631 R~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d 710 (854)
|++..+++||+.+++++++|+||++++.+++..|.......+..|++.+..+++.|+++++|+++|.|+.++.|||+++|
T Consensus 642 R~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~ad 721 (854)
T PLN02205 642 RSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721 (854)
T ss_pred CCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCC
Confidence 99999999998887899999999999999888897655544567999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 711 ~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
|+++.++++++.++++..+.+.++.+.+|+.++||+|+|+|||.|++.+++.+...|+++++++||||+.||++||+.++
T Consensus 722 pd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred hHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 99998899999999999888888889999999999999999999999998765444899999999999999999999998
Q ss_pred hhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHHhccCC
Q 003042 791 QAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVH 839 (854)
Q Consensus 791 ~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~~ 839 (854)
....+..++..++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+
T Consensus 802 ~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 802 SSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred hhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 5444455667778899999999999999999999999999999987654
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.6e-156 Score=1388.92 Aligned_cols=747 Identities=37% Similarity=0.661 Sum_probs=669.8
Q ss_pred CCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCc-chhhHHHhhhcCeeEEEEe
Q 003042 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTF 128 (854)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 128 (854)
..|+||||||||+.++++++ |+|+++++.|||+++|.+ + +..+++||||+|..++.+ +++.+.. .+.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTK-ALAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHH-HhccCceEEEe
Confidence 68999999999999988765 589999999999999975 5 568999999999876653 4555544 45789999999
Q ss_pred CChhhhhhhhcccccccccccccccC-CCCC-CCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHH
Q 003042 129 LPADVHKKYYHGFCKHYLWPLFHYML-PLTA-SHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPS 206 (854)
Q Consensus 129 l~~~~~~~~y~gf~~~~lwp~~H~~~-~~~~-~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~ 206 (854)
|++++++.||+||||++|||+|||+. +..+ ....+|+++.|++|++||++||++|++.++| +|+|||||||||+||+
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHH
Confidence 99999999999999999999999973 2111 0114688899999999999999999999998 4999999999999999
Q ss_pred HHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECC
Q 003042 207 FLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286 (854)
Q Consensus 207 ~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~g 286 (854)
|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|+|||++||.|+||++.... ++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~----~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC----eEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999886542 588999
Q ss_pred eEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 287 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
|.++|.++|+|||++.|...+..+++.+++++++++++|+++||||||||+.|||.++|+||++||++||+|++++||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
|+.|+|+++++|+++++++.++|++||++||+.+|.||+|+.+.++++|+.|||++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
.+ +.|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+|
T Consensus 484 ~~-----------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~ 546 (934)
T PLN03064 484 DS-----------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTH 546 (934)
T ss_pred cC-----------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 73 47999999999999999 5899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCC---
Q 003042 526 DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE--- 602 (854)
Q Consensus 526 ~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~--- 602 (854)
|+.+|+++|+++|.++..++..+ +. . .+.+|+++.+.++|++++.++|++||||||++..+.
T Consensus 547 d~~~Wa~~fl~~L~~~~~~~~~~-~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~ 611 (934)
T PLN03064 547 TAQEWAETFVSELNDTVVEAQLR-TR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGR 611 (934)
T ss_pred CHHHHHHHHHHHHHHHHhhhhcc-cc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccc
Confidence 99999999999999986554211 11 1 124789999999999999999999999999985422
Q ss_pred --------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEc-cccccc
Q 003042 603 --------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEIC-SLTRDF 673 (854)
Q Consensus 603 --------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~-~~~~~~ 673 (854)
...++++++++|++||.++++.|+|+|||+...++.|++.+ +++++|+||++++.++ ..|... ....+.
T Consensus 612 ~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~ 689 (934)
T PLN03064 612 RGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNM 689 (934)
T ss_pred ccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-Ccceeccccccch
Confidence 23478999999999999999999999999999999999887 7999999999998764 478743 333355
Q ss_pred hHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHH-HHhcCCCEEEEEcCeEEEEeeCCcch
Q 003042 674 DWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLE-NVLANEPVVVKRGQHIVEVKPQGVSK 752 (854)
Q Consensus 674 ~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~-~~l~~~~~~v~~g~~~vEI~p~gvsK 752 (854)
.|++.+..++++|++++||+++|.|+++++|||+++||+++..|++++.+++. ..+.+.++.+..|+.++||+|.|+||
T Consensus 690 ~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnK 769 (934)
T PLN03064 690 DWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTK 769 (934)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCH
Confidence 89999999999999999999999999999999999999999999999999984 44556678999999999999999999
Q ss_pred HHHHHHHHHHHhhCC---CCCCeEEEEeCCcc-cHHHHHHhhhhcCC-------------------------------CC
Q 003042 753 GIVVKNLISTMRSRG---KSPDFVLCIGDDRS-DEDMFESIEQAVAD-------------------------------PS 797 (854)
Q Consensus 753 g~al~~ll~~l~~~g---i~~d~vlaiGDs~N-D~~Mf~~ag~~~~~-------------------------------~~ 797 (854)
|.|++.+++++...+ .++|||+|+||+.. ||+||+++...... +.
T Consensus 770 G~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (934)
T PLN03064 770 GAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNS 849 (934)
T ss_pred HHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccc
Confidence 999999999763222 36899999999875 99999998542110 00
Q ss_pred ----------------------------------------C-CCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHHhc
Q 003042 798 ----------------------------------------V-PGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATE 836 (854)
Q Consensus 798 ----------------------------------------~-~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~~~ 836 (854)
+ -...+.|+|+||.+.+.|+|++++.+||+.+|+.|++.
T Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (934)
T PLN03064 850 KNSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANA 929 (934)
T ss_pred cccccccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhcc
Confidence 0 01345699999999999999999999999999999987
Q ss_pred cCC
Q 003042 837 SVH 839 (854)
Q Consensus 837 ~~~ 839 (854)
+..
T Consensus 930 ~~~ 932 (934)
T PLN03064 930 SSS 932 (934)
T ss_pred ccC
Confidence 654
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=4.4e-148 Score=1334.57 Aligned_cols=749 Identities=36% Similarity=0.659 Sum_probs=666.0
Q ss_pred CCCCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCc-chhhHHHhhhcCeeEEE
Q 003042 48 EPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVP 126 (854)
Q Consensus 48 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 126 (854)
....|+||||||||+.+.++++ |+|++++++|||+++|.+ +. ..+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~-~~~~~~~~~ggl~~al~~-~~-~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE-DSWSLEMSPGGLVSALLG-VK-EFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecCC-CceEEeeCCCCHHHHHHH-HH-hcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 4678999999999999887654 689999999999999975 44 57999999999876544 3444433 467899999
Q ss_pred EeCChhhhhhhhccccccccccccccc-CCCCCC-CCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchH
Q 003042 127 TFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTAS-HGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVL 204 (854)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~ll 204 (854)
||| +++++.||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++| +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 99999999999999999999998 232221 114566789999999999999999999998 49999999999999
Q ss_pred HHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEE
Q 003042 205 PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284 (854)
Q Consensus 205 p~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~ 284 (854)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||+++|+|++|+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999886543 4779
Q ss_pred CCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEE
Q 003042 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVL 364 (854)
Q Consensus 285 ~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 364 (854)
+|+.++|.++|+|||++.|......+++.+...+++++++++++|++|||+|+.||+.++|+||++|++++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999877777777778889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeee
Q 003042 365 VQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV 444 (854)
Q Consensus 365 vqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a 444 (854)
|||+.|+|+++++|+++++++++++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q 003042 445 SRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (854)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (854)
||.+ +.|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.
T Consensus 398 ~g~p-----------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~ 460 (797)
T PLN03063 398 CQKA-----------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVK 460 (797)
T ss_pred eecC-----------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 9862 46899999999999999 48999999999999999999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCC--
Q 003042 524 SHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-- 601 (854)
Q Consensus 524 ~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~-- 601 (854)
+||+.+|+++|+++|.++++++..+. ...+.+|+.+.+.++|++++.++|++||||||++..+
T Consensus 461 ~~~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~ 525 (797)
T PLN03063 461 THSAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQ 525 (797)
T ss_pred hCCHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCc
Confidence 99999999999999999887653211 0234579999999999999999999999999998543
Q ss_pred ---CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccc-cccchHHH
Q 003042 602 ---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSL-TRDFDWKE 677 (854)
Q Consensus 602 ---~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~-~~~~~~~~ 677 (854)
....++++++++|++||.++++.|+|+|||+...+++|++.+ +++++|+||++++.+ +..|..... ..+..|++
T Consensus 526 ~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~ 603 (797)
T PLN03063 526 IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVD 603 (797)
T ss_pred cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHH
Confidence 224588999999999999999999999999999999999875 799999999999876 457875432 33567999
Q ss_pred HHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHH-HhcCCCEEEEEcCeEEEEeeCCcchHHHH
Q 003042 678 IAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLEN-VLANEPVVVKRGQHIVEVKPQGVSKGIVV 756 (854)
Q Consensus 678 ~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gvsKg~al 756 (854)
.+.++++.|++++||+++|.|++++.|||+++||+++..++.++.+++.+ .+.+.++.+..|+.++||+|.|+|||.|+
T Consensus 604 ~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av 683 (797)
T PLN03063 604 GVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAI 683 (797)
T ss_pred HHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHH
Confidence 99999999999999999999999999999999999998999999999844 44566789999999999999999999999
Q ss_pred HHHHHHHhhC---CCCCCeEEEEeCCc-ccHHHHHHhhhhcCC--------C-----------CCCCCccEEEEEecCCC
Q 003042 757 KNLISTMRSR---GKSPDFVLCIGDDR-SDEDMFESIEQAVAD--------P-----------SVPGIAEVFACTVGQKP 813 (854)
Q Consensus 757 ~~ll~~l~~~---gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~--------~-----------~~~~~~~~~aV~vG~~~ 813 (854)
+.+++++... +..+|+++|+||+. .||+||++++..... . .....+++|+|+||.++
T Consensus 684 ~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~ 763 (797)
T PLN03063 684 GRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQAR 763 (797)
T ss_pred HHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCC
Confidence 9999976221 23689999999985 699999998642100 0 01234578999999999
Q ss_pred cccceEeCCHhHHHHHHHHHHhccCCC
Q 003042 814 SMAKYYLDDTAEVINLLEGLATESVHS 840 (854)
Q Consensus 814 s~A~y~l~~~~eV~~~L~~l~~~~~~~ 840 (854)
|+|+|+|++++||.++|+.|+..+...
T Consensus 764 s~A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 764 TKARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred ccCeecCCCHHHHHHHHHHHhccCccc
Confidence 999999999999999999999866543
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=6.6e-140 Score=1268.38 Aligned_cols=720 Identities=36% Similarity=0.665 Sum_probs=655.7
Q ss_pred CcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCC---cchhhHHHhhhcCeeEEEE
Q 003042 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV---DDQEEVSTILLEKFKCVPT 127 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 127 (854)
+||||||||+|+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988754 379999999999999987665 5789999999976543 2223333 34678999999
Q ss_pred eCChhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHH
Q 003042 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (854)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~ 207 (854)
|+++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 57999999999999999999999999984 9999999999999999
Q ss_pred HHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCe
Q 003042 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (854)
Q Consensus 208 lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr 287 (854)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||.|++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003042 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (854)
Q Consensus 288 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 367 (854)
.++|.++|+|||++.|.+....+.+.+..+++++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778887888889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeec
Q 003042 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (854)
Q Consensus 368 ~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~ 447 (854)
+.|+|.+.++|+++++++.+++++||++||+.+|.|++++.+.++++|++++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCh
Q 003042 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (854)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (854)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+
T Consensus 387 ~-----------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~ 449 (726)
T PRK14501 387 D-----------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDV 449 (726)
T ss_pred C-----------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCC--CCCC
Q 003042 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS--EDKR 605 (854)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~--~~~~ 605 (854)
..|+++|++++.++++++.... +..|+.|+++.+.++|+.+++|+|+|||||||++... ....
T Consensus 450 ~~w~~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~ 514 (726)
T PRK14501 450 HKWASDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAV 514 (726)
T ss_pred HHHHHHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCC
Confidence 9999999999999887653211 1235678999999999999999999999999998431 3356
Q ss_pred CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHH
Q 003042 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKL 685 (854)
Q Consensus 606 is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 685 (854)
++++++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~ 591 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEE 591 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHH
Confidence 89999999999977789999999999999999999876 5789999999998664 46765432 356799999999999
Q ss_pred HhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhh
Q 003042 686 YTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRS 765 (854)
Q Consensus 686 y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~ 765 (854)
|.++++|++++.++..+.|||++++++++..+++++.++++..+.+..+.+..|+.++||+|+++|||.|++.+++
T Consensus 592 ~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~---- 667 (726)
T PRK14501 592 FVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE---- 667 (726)
T ss_pred HHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh----
Confidence 9999999999999999999999999988888888899999888877788889999999999999999999999998
Q ss_pred CCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHHh
Q 003042 766 RGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 766 ~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~~ 835 (854)
++++++++||||+.||++||+.++. ..++|+||++++.|+|+++++++|+++|+.|++
T Consensus 668 -~~~~d~vl~~GD~~nDe~Mf~~~~~-----------~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 668 -AGPYDFVLAIGDDTTDEDMFRALPE-----------TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred -cCCCCEEEEECCCCChHHHHHhccc-----------CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 5789999999999999999999753 138999999999999999999999999999875
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-127 Score=1119.26 Aligned_cols=728 Identities=54% Similarity=0.932 Sum_probs=683.9
Q ss_pred CCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeC
Q 003042 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (854)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 129 (854)
..|+|+|||+||+.+.++.+++.|.|+++.+|++.++..++. ..+..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 579999999999999766677799999999999999988766 5889999999988899999999999999999999999
Q ss_pred Chhhhhhhhccccccccccccccc-CCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHH
Q 003042 130 PADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFL 208 (854)
Q Consensus 130 ~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~l 208 (854)
+++....+|+||||++|||+|||+ .+..+.+. .|+.+.|++|+++|++|||++++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 56655553 77899999999999999999999999 5799999999999999999
Q ss_pred HhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeE
Q 003042 209 RKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288 (854)
Q Consensus 209 r~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~ 288 (854)
|++.++++||||+|.|||++|+|||+|.|+||++||+++|+|||||++|+|||++||.|++|+++.+..+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 368 (854)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecC
Q 003042 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (854)
Q Consensus 369 ~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~ 448 (854)
.|++++++++++++.++...+.+||++||+..++||+++...++..++.++|.+||||++++++|||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred CCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCh
Q 003042 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (854)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (854)
+.+++|+|||+|+++++ ++++++||||.+++|.+|..+|+|++++++.|+.++++++..|++
T Consensus 399 -----------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~ 461 (732)
T KOG1050|consen 399 -----------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDV 461 (732)
T ss_pred -----------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhH
Confidence 46999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCC
Q 003042 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPS 607 (854)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is 607 (854)
..|+.+|++.+. ++|+.|+ +.+++..+ |+.+.+.+.|+++++|+|++|||||++...+..
T Consensus 462 ~~W~~~~~~~l~---------~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~---- 521 (732)
T KOG1050|consen 462 VYWAKSFLQGLK---------RIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK---- 521 (732)
T ss_pred HHHHHHHHHhhh---------hhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch----
Confidence 999999999444 4566777 77777654 788999999999999999999999999833221
Q ss_pred HHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHh
Q 003042 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYT 687 (854)
Q Consensus 608 ~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~ 687 (854)
+...|+.||.++++.|+|+|||++..+..|+..++++|++||||++++.+++ |.... .+.+|++.+++++++|+
T Consensus 522 --~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ 595 (732)
T KOG1050|consen 522 --AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYT 595 (732)
T ss_pred --HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999889999999999999999988 99877 77899999999999999
Q ss_pred ccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCC
Q 003042 688 ETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRG 767 (854)
Q Consensus 688 ~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g 767 (854)
++|||+++|.++.+++|||+++|++++.+|++|+.++|+. .+.++.+..|+..||+.|.|+|||.++..++..+ .
T Consensus 596 ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~ 670 (732)
T KOG1050|consen 596 ERTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---V 670 (732)
T ss_pred hcCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---C
Confidence 9999999999999999999999999999999999999998 7889999999999999999999999999999998 5
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
.++|+++|+||+..|++||...........+ ...|+|++|.+++.|+|+++++.+|.++|+
T Consensus 671 ~~~df~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 671 KEPDFVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred CCcceEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 5679999999999999999998764322111 678999999999999999999999999875
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=1.3e-120 Score=1018.28 Aligned_cols=456 Identities=29% Similarity=0.519 Sum_probs=420.9
Q ss_pred CcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCC
Q 003042 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLP 130 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 130 (854)
+|+||||||+|+.. + + +.++|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|+
T Consensus 2 ~rLivVSNRlp~~~-----~--~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPD-----E--H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCC-----C--C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecCC
Confidence 69999999999632 1 1 4467999999988775 4799999999964322 22233333467999999999
Q ss_pred hhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHh
Q 003042 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (854)
Q Consensus 131 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~ 210 (854)
++++++||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||++||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999765 5899999999999999999999999998 49999999999999999999
Q ss_pred ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEE
Q 003042 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (854)
Q Consensus 211 ~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (854)
+.|+++||||||||||++|+|++||+|+|||+|||+||+|||||++|++||++||++++|++.... ..+.++||.++
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999886432 24678899999
Q ss_pred EEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 291 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
|+++|+|||++.|...+..+ ...+.++++++++++++|+||||+||+|||.++|+||++||++||+|+||++|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999887755 56678899999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.|+|++|||+++||+|||||||++||+|||+.
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999872
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (854)
+++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|
T Consensus 378 --------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W 443 (474)
T PRK10117 378 --------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHW 443 (474)
T ss_pred --------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHH
Confidence 347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 003042 531 AKSIDQDLERACRD 544 (854)
Q Consensus 531 ~~~~l~~l~~~~~~ 544 (854)
+++||.+|.++...
T Consensus 444 ~~~fL~~L~~~~~~ 457 (474)
T PRK10117 444 QECFISDLKQIVPR 457 (474)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999987543
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=4.2e-119 Score=1018.13 Aligned_cols=462 Identities=26% Similarity=0.451 Sum_probs=427.9
Q ss_pred EEcCCccceEEeCCCC-ceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCC-cch-hhHHHhhhcCeeEEEEeCChh
Q 003042 56 VANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV-DDQ-EEVSTILLEKFKCVPTFLPAD 132 (854)
Q Consensus 56 vsnrlP~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 132 (854)
||||||+.++++++|+ +|++++++|||+++|.+.+.+..+++||||+|...++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876542 5888999999999999877655789999999975221 111 112212245799999999999
Q ss_pred hhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhcc
Q 003042 133 VHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF 212 (854)
Q Consensus 133 ~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~ 212 (854)
+++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5899999999999999999999999997 4999999999999999999999
Q ss_pred CCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCc--------------
Q 003042 213 HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRG-------------- 278 (854)
Q Consensus 213 ~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~-------------- 278 (854)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred ---eeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhC
Q 003042 279 ---YIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355 (854)
Q Consensus 279 ---~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~ 355 (854)
.+++.++||+++|+++|+|||++.|.+....+++.+.++++|++++++++|++|||+|+.|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 23588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCC
Q 003042 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGM 435 (854)
Q Consensus 356 p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~ 435 (854)
|+++|+++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 003042 436 NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRH 515 (854)
Q Consensus 436 ~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~ 515 (854)
|||++||||||++ ++|+||+|||+|++++|.+|++|||||++++|+||.+||+||.+||+.|+
T Consensus 395 NLVa~Eyva~~~~-----------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~ 457 (487)
T TIGR02398 395 NLVAKEYVAAQGL-----------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARM 457 (487)
T ss_pred CcchhhHHhhhcC-----------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999873 47999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccccChHHHHHHHHHHHHH
Q 003042 516 EKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 516 ~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
++++++|.+||+.+|+++||.+|..
T Consensus 458 ~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 458 REMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 9999999999999999999999865
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=1.5e-119 Score=1024.98 Aligned_cols=468 Identities=42% Similarity=0.801 Sum_probs=359.1
Q ss_pred CcEEEEEcCCccceEEeCCCCc--eEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcc--hhhHHHhhhcCeeEEE
Q 003042 51 QRRIIVANQLPVKAYYEKDSNK--WGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD--QEEVSTILLEKFKCVP 126 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~p 126 (854)
.|+||||||||+.+++++++|. |+++.+.|||+++|.+.+. ..+++||||+|...+..+ ++.+.+.+.++|+|+|
T Consensus 1 ~~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~p 79 (474)
T PF00982_consen 1 ARLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVP 79 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEE
T ss_pred CCcccccccccccccccccccccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEE
Confidence 3799999999999999874455 8888899999999976443 479999999998876544 5566667789999999
Q ss_pred EeCChhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHH
Q 003042 127 TFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPS 206 (854)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~ 206 (854)
||+++++++.||+||||++|||+|||.++..+. ...|+.+.|++|++||++||++|++.++| +|+|||||||||+||+
T Consensus 80 V~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~ 157 (474)
T PF00982_consen 80 VFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQ 157 (474)
T ss_dssp EEE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHH
T ss_pred EEcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHH
Confidence 999999999999999999999999998762222 26899999999999999999999999997 5999999999999999
Q ss_pred HHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECC
Q 003042 207 FLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286 (854)
Q Consensus 207 ~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~g 286 (854)
+||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.++|
T Consensus 158 ~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~G 235 (474)
T PF00982_consen 158 MLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNG 235 (474)
T ss_dssp HHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETT
T ss_pred HHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888766 699999
Q ss_pred eEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCC-CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003042 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (854)
Q Consensus 287 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 365 (854)
|.++|.++|+|||++.|...+.++++.++.+++++++++ +++|+||||+|++|||.++|+||++||++||+|+|+++|+
T Consensus 236 r~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~li 315 (474)
T PF00982_consen 236 RRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLI 315 (474)
T ss_dssp EEEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEE
T ss_pred EEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEE
Confidence 999999999999999999999999999999999999988 4999999999999999999999999999999999999999
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
||+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|||++||||++||+|||||||++||++|
T Consensus 316 Qi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~ 395 (474)
T PF00982_consen 316 QIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVAC 395 (474)
T ss_dssp EE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHH
T ss_pred EEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc
Q 003042 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (854)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (854)
|++ ++|+||+|||+|++++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+
T Consensus 396 q~~-----------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~ 458 (474)
T PF00982_consen 396 QDD-----------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVRE 458 (474)
T ss_dssp S-T-----------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHH
T ss_pred ecC-----------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Confidence 883 479999999999999997 67999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHH
Q 003042 525 HDVAYWAKSIDQDLER 540 (854)
Q Consensus 525 ~~~~~W~~~~l~~l~~ 540 (854)
||+.+|+++||++|++
T Consensus 459 ~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 459 HDVQWWAESFLRDLKR 474 (474)
T ss_dssp T-HHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhC
Confidence 9999999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-114 Score=957.30 Aligned_cols=467 Identities=39% Similarity=0.661 Sum_probs=433.0
Q ss_pred CCCCCCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEE
Q 003042 46 IVEPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCV 125 (854)
Q Consensus 46 ~~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (854)
+.....|+|+||||+|+...+..+++...+..++|||+++|...+ ...+++|+||+|...++.+-.........++...
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~ 88 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSA 88 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEE
Confidence 456778999999999999876666667888999999999997654 4589999999998764333222333345689999
Q ss_pred EEeCChhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHH
Q 003042 126 PTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLP 205 (854)
Q Consensus 126 pv~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp 205 (854)
||+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.+++ +|+||||||||+|||
T Consensus 89 ~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P 162 (486)
T COG0380 89 PVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVP 162 (486)
T ss_pred EEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhH
Confidence 9999999999999999999999999999875 5899999999999999999999999998 499999999999999
Q ss_pred HHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEE--
Q 003042 206 SFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD-- 283 (854)
Q Consensus 206 ~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~-- 283 (854)
+|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||.+|++||+++|+|+++.... ..+.
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~ 237 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFN 237 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred -ECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCC-CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCc
Q 003042 284 -YFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGK 361 (854)
Q Consensus 284 -~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~ 361 (854)
++|+.+++..+|+|||+..|.....++.+..++.++++.+.+ +++|++|||+|+.||+..+++||++||++||+|+||
T Consensus 238 ~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~k 317 (486)
T COG0380 238 GADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGK 317 (486)
T ss_pred ccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCc
Confidence 448999999999999999999999999998889999999976 999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCccee
Q 003042 362 VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (854)
Q Consensus 362 vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~E 441 (854)
++|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++||++++||+|||||||++|
T Consensus 318 vvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakE 397 (486)
T COG0380 318 VVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKE 397 (486)
T ss_pred eEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q 003042 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (854)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (854)
|+|||. +++|+||+|||+||+.+|.+|++|||||.+++|+||.+||+|+++||+.|++++++.
T Consensus 398 yVa~q~-----------------~~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~ 460 (486)
T COG0380 398 YVAAQR-----------------DKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQ 460 (486)
T ss_pred HHHhhc-----------------CCCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999987 347999999999999999999999999999999999999999999999999999999
Q ss_pred ccccChHHHHHHHHHHHHHH
Q 003042 522 ISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 522 v~~~~~~~W~~~~l~~l~~~ 541 (854)
|.+||+++|+++|+.+|.++
T Consensus 461 v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 461 VLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=1.4e-107 Score=931.33 Aligned_cols=454 Identities=39% Similarity=0.687 Sum_probs=423.2
Q ss_pred cEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCc-chhhHHHhhhcCeeEEEEeCC
Q 003042 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTFLP 130 (854)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~l~ 130 (854)
||||||||+|+.+.++ + +++++|||+++|.+.+. ..+++||||+|...+++ ++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 7999999999988653 1 56788999999988765 46999999999765433 334455556788999999999
Q ss_pred hhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHh
Q 003042 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (854)
Q Consensus 131 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~ 210 (854)
+++++.||+||||++|||+|||+++. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999654 5899999999999999999999999997 59999999999999999999
Q ss_pred ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEE
Q 003042 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (854)
Q Consensus 211 ~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (854)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||+++|+|++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999887543 3678899999
Q ss_pred EEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 291 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
|.++|+|||++.|.+....+++.+..+.+|++++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888778888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
+|+++++|+++++++++++++||++||..+|.|++++.+.++.+|+.++|++|||||+||++||||||++|||||+.
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~--- 380 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD--- 380 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (854)
++.|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.+||+.|+++++++|.+||+.+|
T Consensus 381 --------------P~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 446 (456)
T TIGR02400 381 --------------PKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446 (456)
T ss_pred --------------CCCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 235899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003042 531 AKSIDQDLE 539 (854)
Q Consensus 531 ~~~~l~~l~ 539 (854)
+++|+.+|.
T Consensus 447 ~~~~l~~l~ 455 (456)
T TIGR02400 447 REDFLSDLN 455 (456)
T ss_pred HHHHHHHhh
Confidence 999999874
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=5e-98 Score=859.54 Aligned_cols=459 Identities=42% Similarity=0.762 Sum_probs=427.8
Q ss_pred cEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCCh
Q 003042 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPA 131 (854)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 131 (854)
|+||||||+|+.++++++ |.|+++++.|||+++|.+.+. ..+++||||++...+.++.+.+.....++|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998765 589999999999999987554 579999999998766544444555667899999999999
Q ss_pred hhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhc
Q 003042 132 DVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKR 211 (854)
Q Consensus 132 ~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~ 211 (854)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|++.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5899999999999999999999999997 599999999999999999999
Q ss_pred cCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEE
Q 003042 212 FHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291 (854)
Q Consensus 212 ~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i 291 (854)
.|+++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++..... .+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~---~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG---GVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc---eEEECCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999998866532 68899999999
Q ss_pred EEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003042 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (854)
Q Consensus 292 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 371 (854)
.++|+|||++.|......+...++..++++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777676666666777778899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCc
Q 003042 372 RSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (854)
Q Consensus 372 r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~ 451 (854)
++++++++++++++++++++||.+||..+|.|++++.+.++.+++.++|++|||||+||++||||||++|||||+.
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~---- 385 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD---- 385 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHH
Q 003042 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531 (854)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 531 (854)
+++|++|+|+++|+++++.+|++|||+|++++|++|.++|+|++++++.+++++++++.++|+..|+
T Consensus 386 -------------p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~ 452 (460)
T cd03788 386 -------------DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWA 452 (460)
T ss_pred -------------CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 2468999999999999988899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003042 532 KSIDQDL 538 (854)
Q Consensus 532 ~~~l~~l 538 (854)
++|+++|
T Consensus 453 ~~~l~~l 459 (460)
T cd03788 453 NSFLDDL 459 (460)
T ss_pred HHHHHhh
Confidence 9999987
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.1e-33 Score=339.56 Aligned_cols=544 Identities=14% Similarity=0.103 Sum_probs=320.6
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhh-----------------cCCChHHH-HHHhhcCCeEeec
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----------------TLPVRDEI-LKSLLNSDLIGFH 253 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~-----------------~lp~r~ei-l~~ll~~dligf~ 253 (854)
|+|+-|+.+--.+...|++++ ++|..++.|.- ..+-++ .++.|-+. -..+-.||.|--.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999877777777777765 68999999963 111111 11222221 1245678999888
Q ss_pred CHHHHHHHHHHHH-------hhhCccccccCceeeEEECCe-EEEEEEeccccCchHHHhhhCCchH-------------
Q 003042 254 TFDYARHFLSSCS-------RMLGLNYESKRGYIGLDYFGR-TVSIKILPVGIHMGQFESIMSLDVT------------- 312 (854)
Q Consensus 254 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~i~~~gr-~~~i~v~p~GId~~~~~~~~~~~~~------------- 312 (854)
|......-...-. |.|-.. ..+ ++..+|+ .-++.|+|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~~--~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRAR--ARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhhh--hcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 8776654322110 111000 111 2333333 2388999999999999863211110
Q ss_pred HHHHHHHHHHc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH----HHHHHHHH
Q 003042 313 GQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDV----QDLLSDTN 386 (854)
Q Consensus 313 ~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~----~~l~~~v~ 386 (854)
.....+++..+ +++++||+|||+++.||+..+|+||..+.+..+.. ++++ ++|... +.... ..+..++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112333333 57889999999999999999999999986543321 3433 345311 11111 12334455
Q ss_pred HHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC----cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCC
Q 003042 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462 (854)
Q Consensus 387 ~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A----Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~ 462 (854)
.++.+ .+....+.|.+.++.+++.++|+.| ||||+||.+||||++++|||||
T Consensus 539 ~li~~-------lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----------------- 594 (1050)
T TIGR02468 539 KLIDK-------YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----------------- 594 (1050)
T ss_pred HHHHH-------hCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----------------
Confidence 55555 3344566778889999999999988 6999999999999999999999
Q ss_pred CCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 463 PPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 463 ~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
|.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.++ .++...+..++.+.++++...++++++.+.
T Consensus 595 ----GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpe-lr~~m~~~gr~~v~~FSWe~ia~~yl~~i~ 669 (1050)
T TIGR02468 595 ----GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQ-LWAECRQNGLKNIHLFSWPEHCKTYLSRIA 669 (1050)
T ss_pred ----CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 45999999999888873 4999999999999999999998664 444455556677788999999999998888
Q ss_pred HHHHhcccccccc-----------cC--------CCcceeEeecCc--cc-----cccCH----HHHHHH----------
Q 003042 540 RACRDHLFKRCWG-----------VG--------LGLGFRIVALGP--EF-----RKLGM----HHIASA---------- 579 (854)
Q Consensus 540 ~~~~~~~~~~~~~-----------~g--------~~~~~~~~~~~~--~f-----~~l~~----~~i~~~---------- 579 (854)
.....+..-.... .+ .+|++.+-.-.+ +. ..++. ..+.++
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (1050)
T TIGR02468 670 SCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKG 749 (1050)
T ss_pred HHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccc
Confidence 7655441110000 01 011111100000 00 00000 011111
Q ss_pred -------------Hh--hcCCeEEE--EecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 580 -------------YN--KTNSRLIL--LDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 580 -------------y~--~~~~klI~--~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
|. ....++|+ +|+|+| .. ....-..+.++++.-.....+.++++|||+...+..++..
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~ 824 (1050)
T TIGR02468 750 SSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKS 824 (1050)
T ss_pred cccccccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHh
Confidence 11 11246666 899999 33 1112223333333211234578999999999999998754
Q ss_pred --Cc---ccceeecCcEEEEECCC-----cceEEcc---ccccchHH-HHHHHHHHHHhcc--------CCcceEecccc
Q 003042 643 --VE---KLGLSAEHGYFTRWSKN-----SAWEICS---LTRDFDWK-EIAEPVMKLYTET--------TDGSFIEDKET 700 (854)
Q Consensus 643 --~~---~l~liaenG~~I~~~~~-----~~~~~~~---~~~~~~~~-~~v~~~~~~y~~~--------~~g~~ie~k~~ 700 (854)
+| .-.+||.-|..|+++.. ..|..-. ...+..|. +.++..+..+... .++...+..+.
T Consensus 825 ~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~ 904 (1050)
T TIGR02468 825 GGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEES 904 (1050)
T ss_pred CCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhh
Confidence 33 22368888988888621 1222100 01122342 2233333333221 12222222221
Q ss_pred --eEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEE-Ee
Q 003042 701 --AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLC-IG 777 (854)
Q Consensus 701 --~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vla-iG 777 (854)
.....|.-.++... ...+++.+.|+..--...+....+..+++|.|..+|||.|+++|+.++ |++.+++++ +|
T Consensus 905 q~~~k~SY~v~d~~~~-~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaG 980 (1050)
T TIGR02468 905 STDHCYAFKVKDPSKV-PPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVG 980 (1050)
T ss_pred CCCceEEEEecCcccC-ccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEec
Confidence 22333321222211 123444444442211111222334589999999999999999999999 999999955 99
Q ss_pred CCcc-cHHHH
Q 003042 778 DDRS-DEDMF 786 (854)
Q Consensus 778 Ds~N-D~~Mf 786 (854)
|+.| |+++|
T Consensus 981 dSGntD~e~L 990 (1050)
T TIGR02468 981 ESGDTDYEGL 990 (1050)
T ss_pred cCCCCCHHHH
Confidence 9999 95544
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.7e-31 Score=274.86 Aligned_cols=249 Identities=32% Similarity=0.499 Sum_probs=213.4
Q ss_pred CHHHHHHHHhhcCCeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCccccee
Q 003042 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (854)
Q Consensus 572 ~~~~i~~~y~~~~~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~li 649 (854)
....+.+.|...++++|++||||||++.. +....++++++++|++|+.+.++.|+|+|||+..+++.+++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 34566778899999999999999999854 24556889999999999999999999999999999999997 8899999
Q ss_pred ecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHh
Q 003042 650 AEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVL 729 (854)
Q Consensus 650 aenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l 729 (854)
|+||++++.+.+..|..........|++.+..++++|.+++||+++|.|+..+.|||+++.++....++...... .
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~----~ 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT----L 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh----c
Confidence 999999998888888877777777899999999999999999999999999999999999776543322222211 1
Q ss_pred cCCC-EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEE
Q 003042 730 ANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACT 808 (854)
Q Consensus 730 ~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~ 808 (854)
.+.. +.++.|+..||++|.++|||.+++++++.. +...++++|.||+..|+.||++++.. +.++|.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~----------~~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKL----------DSITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccC----------CCceEE
Confidence 2222 889999999999999999999999999987 55556899999999999999999874 237899
Q ss_pred ecCCCcccceEeCCHhHHHHHHHHHHhccC
Q 003042 809 VGQKPSMAKYYLDDTAEVINLLEGLATESV 838 (854)
Q Consensus 809 vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 838 (854)
+|...+.|++.+.........+.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999999988887654
No 14
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.97 E-value=2e-30 Score=274.62 Aligned_cols=237 Identities=30% Similarity=0.447 Sum_probs=194.4
Q ss_pred cCCeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECC
Q 003042 583 TNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSK 660 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~ 660 (854)
++.++|+|||||||++.. +....+++++.++|++|++++++.|+|+|||+..++...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 467999999999999843 2345678999999999999999999999999988887665 3478999999999998744
Q ss_pred Cc-ceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccC-CCccchhhHHHHHHHHHHHhcCCCEEEEE
Q 003042 661 NS-AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHA-DPHFGSCQAKELLDHLENVLANEPVVVKR 738 (854)
Q Consensus 661 ~~-~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~-d~~~~~~~~~el~~~l~~~l~~~~~~v~~ 738 (854)
.. .|... ......|++.+.++.+++.++ +|+++|.|+.++.|||+.+ +++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 35432 222246888888999988887 9999999999999999998 77776666666665543 334678899
Q ss_pred cCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe--cCCCccc
Q 003042 739 GQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV--GQKPSMA 816 (854)
Q Consensus 739 g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v--G~~~s~A 816 (854)
++.++|++|.++|||.+++.+++.+ ++.++++++|||+.||++||+.+.... .....++|.| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 888899999999999999999993210 0112467777 8888999
Q ss_pred ceEeCCHhHHHHHHHHHH
Q 003042 817 KYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 817 ~y~l~~~~eV~~~L~~l~ 834 (854)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
No 15
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.97 E-value=4.1e-30 Score=274.92 Aligned_cols=231 Identities=20% Similarity=0.251 Sum_probs=184.4
Q ss_pred CeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCc
Q 003042 585 SRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~ 662 (854)
.++|++||||||++.. +....++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 5899999999999832 1356889999999999955589999999999999999999654 467899999999876544
Q ss_pred ceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhc-CC-CEEEEEcC
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA-NE-PVVVKRGQ 740 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~-~~-~~~v~~g~ 740 (854)
.+... ...++.+.+...++.+.++++|+++|.++..+.+||+.++.+ .+.+..+.+.+. .. ...+.+++
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~------~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH------EDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc------HHHHHHHHHHHHhhCCceEEeCCC
Confidence 33222 233444444455556678889999999999999999877321 222333332222 22 36677899
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEe
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYL 820 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l 820 (854)
.++||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRL 230 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeC
Confidence 99999999999999999999999 99999999999999999999999432 127899999999999999
Q ss_pred CCHhHHHHHHHHHHhccC
Q 003042 821 DDTAEVINLLEGLATESV 838 (854)
Q Consensus 821 ~~~~eV~~~L~~l~~~~~ 838 (854)
+++++|..+|+.|++..+
T Consensus 231 ~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCHHHHHHHHHHHHHhhh
Confidence 999999999999997665
No 16
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.97 E-value=4.5e-31 Score=278.15 Aligned_cols=227 Identities=41% Similarity=0.742 Sum_probs=154.2
Q ss_pred EEecCCCCCCCCC--CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEE
Q 003042 589 LLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (854)
Q Consensus 589 ~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~ 666 (854)
|+||||||.+..+ ....+++++.++|++||+++++.|+|+|||+...+.. +..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~-~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLER-FGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHH-H-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHH-hcCCCCceEEEEeeEEeccCccccccc
Confidence 6999999999543 3456889999999999999999999999999999444 446789999999999999999888887
Q ss_pred ccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC-CEEEEEcCeEEEE
Q 003042 667 CSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQHIVEV 745 (854)
Q Consensus 667 ~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~-~~~v~~g~~~vEI 745 (854)
........|++.+.++++.|.++++|+++|.|++++.|||++++++++..++.++.+++.+.+... .+.+..|+..+||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555666689999999999999999999999999999999999999998889999999998877765 7899999999999
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-----CCcccceEe
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-----KPSMAKYYL 820 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-----~~s~A~y~l 820 (854)
+|.+++||.|+++|++.+...+..+++++|+||+.+|++||++++... ..-+++.||. +++.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987222233789999999999999999987631 1125666664 579999999
Q ss_pred CCHh
Q 003042 821 DDTA 824 (854)
Q Consensus 821 ~~~~ 824 (854)
+||.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
No 17
>PLN03017 trehalose-phosphatase
Probab=99.97 E-value=1.9e-29 Score=274.08 Aligned_cols=245 Identities=26% Similarity=0.371 Sum_probs=193.8
Q ss_pred HHHHHHHhhcCCeEEEEecCCCCCCCCC-CCC-CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeec
Q 003042 574 HHIASAYNKTNSRLILLDYDGTVMPQTS-EDK-RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAE 651 (854)
Q Consensus 574 ~~i~~~y~~~~~klI~~DlDGTLl~~~~-~~~-~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liae 651 (854)
+.++. +.+.+..+||+||||||++... .++ .+++++.++|++|+ +++.|+|+|||++..+..+++ +.+++++++
T Consensus 101 ~~~~~-~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~ 176 (366)
T PLN03017 101 EQIME-ASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGS 176 (366)
T ss_pred HHHHH-HhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEc
Confidence 33443 3455789999999999996443 233 79999999999994 678999999999999999864 457889999
Q ss_pred CcEEEEECCCcceEE------ccccccchHHHHHHHH---HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHH
Q 003042 652 HGYFTRWSKNSAWEI------CSLTRDFDWKEIAEPV---MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELL 722 (854)
Q Consensus 652 nG~~I~~~~~~~~~~------~~~~~~~~~~~~v~~~---~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~ 722 (854)
||+.++.+++..+.. ........|...+.++ +..++++++|+++|.|.+++.|||+++++.. ..++.
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~----~~~l~ 252 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK----WSELV 252 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----HHHHH
Confidence 999998765422111 1111223466666655 5567888999999999999999999997642 35666
Q ss_pred HHHHHHhcCCC-EEEEEcCeEEEEeeC-CcchHHHHHHHHHHHhhCCCC---CCeEEEEeCCcccHHHHHHhhhhcCCCC
Q 003042 723 DHLENVLANEP-VVVKRGQHIVEVKPQ-GVSKGIVVKNLISTMRSRGKS---PDFVLCIGDDRSDEDMFESIEQAVADPS 797 (854)
Q Consensus 723 ~~l~~~l~~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~---~d~vlaiGDs~ND~~Mf~~ag~~~~~~~ 797 (854)
.++...+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+ |.. .++++|||||.+||+||+.+....
T Consensus 253 ~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l---~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---- 325 (366)
T PLN03017 253 LQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESL---GFGNTNNVFPVYIGDDRTDEDAFKMLRDRG---- 325 (366)
T ss_pred HHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhc---ccccCCCceEEEeCCCCccHHHHHHHhhcC----
Confidence 77777776665 789999999999996 999999999999988 543 568999999999999999996421
Q ss_pred CCCCccEEEEEec--CCCcccceEeCCHhHHHHHHHHHHhccC
Q 003042 798 VPGIAEVFACTVG--QKPSMAKYYLDDTAEVINLLEGLATESV 838 (854)
Q Consensus 798 ~~~~~~~~aV~vG--~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 838 (854)
..++|.|| .+++.|+|+|+++++|..+|+.|+.-..
T Consensus 326 -----~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~ 363 (366)
T PLN03017 326 -----EGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQ 363 (366)
T ss_pred -----CceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHh
Confidence 13899999 5789999999999999999999987543
No 18
>PLN02151 trehalose-phosphatase
Probab=99.97 E-value=4.8e-29 Score=270.24 Aligned_cols=242 Identities=23% Similarity=0.376 Sum_probs=191.5
Q ss_pred hhcCCeEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEE
Q 003042 581 NKTNSRLILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRW 658 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~ 658 (854)
.+.+..+||+||||||++... ....++++++++|++|+ ++..|+|+|||+...+..+++ +++++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA--KCFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh--cCCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456789999999999997542 34478999999999996 457999999999999999996 5689999999999987
Q ss_pred CC-CcceEEc----cccccchHHHHHHHHHHHH---hccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhc
Q 003042 659 SK-NSAWEIC----SLTRDFDWKEIAEPVMKLY---TETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA 730 (854)
Q Consensus 659 ~~-~~~~~~~----~~~~~~~~~~~v~~~~~~y---~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~ 730 (854)
++ +..|+.. ......+|...+.++++.+ +.+++|+++|.|.+++.|||++++++ ..+++..++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 3455421 1122346777777665554 57899999999999999999999765 23456677777776
Q ss_pred CCC-EEEEEcCeEEEEeeC-CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEE
Q 003042 731 NEP-VVVKRGQHIVEVKPQ-GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACT 808 (854)
Q Consensus 731 ~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~ 808 (854)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+.-.+...++++|||||.+||+||+.+..... -+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~---------G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQ---------GLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCC---------CccEE
Confidence 655 789999999999996 9999999999999871112234679999999999999999864211 15677
Q ss_pred ec--CCCcccceEeCCHhHHHHHHHHHHhccC
Q 003042 809 VG--QKPSMAKYYLDDTAEVINLLEGLATESV 838 (854)
Q Consensus 809 vG--~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 838 (854)
|| .+++.|+|+|+++++|..+|+.|+.-..
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhh
Confidence 76 6789999999999999999999987443
No 19
>PLN02580 trehalose-phosphatase
Probab=99.97 E-value=3.5e-29 Score=274.53 Aligned_cols=241 Identities=25% Similarity=0.376 Sum_probs=186.3
Q ss_pred HHHhhcCCeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 578 SAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 578 ~~y~~~~~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
.+|.+.+.+++|+||||||.+.. +....++++++++|++|+++ ..|+|+|||+...+.++++ ++.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~-~~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVG-LTELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhC-CCCccEEEeCCce
Confidence 37889999999999999999854 24556899999999999654 4799999999999999996 4579999999999
Q ss_pred EEECCC----cceEEcc------------ccccchHHHHHHHHHHH---HhccCCcceEecccceEEEeeccCCCccchh
Q 003042 656 TRWSKN----SAWEICS------------LTRDFDWKEIAEPVMKL---YTETTDGSFIEDKETAIVWHHQHADPHFGSC 716 (854)
Q Consensus 656 I~~~~~----~~~~~~~------------~~~~~~~~~~v~~~~~~---y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~ 716 (854)
++.+.+ ..|...+ .....+|...+.++.+. ++++++|+++|.|.+++.||||++++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1222111 01123566555555544 5677899999999999999999997765443
Q ss_pred hHHHHHHHHHHHhcCCC-EEEEEcCeEEEEee-CCcchHHHHHHHHHHHhhCCCCCC-e--EEEEeCCcccHHHHHHhhh
Q 003042 717 QAKELLDHLENVLANEP-VVVKRGQHIVEVKP-QGVSKGIVVKNLISTMRSRGKSPD-F--VLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 717 ~~~el~~~l~~~l~~~~-~~v~~g~~~vEI~p-~gvsKg~al~~ll~~l~~~gi~~d-~--vlaiGDs~ND~~Mf~~ag~ 791 (854)
+.. .+.+.+.+.+ +.+..|+.++||+| .++|||.|++++++++ |+..+ + ++||||+.||++||+.+..
T Consensus 269 ~~~----~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQ----CVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHH----HHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 333 3333444444 78889999999999 5999999999999998 87654 3 4999999999999998754
Q ss_pred hcCCCCCCCCccEEEEEec--CCCcccceEeCCHhHHHHHHHHHHhcc
Q 003042 792 AVADPSVPGIAEVFACTVG--QKPSMAKYYLDDTAEVINLLEGLATES 837 (854)
Q Consensus 792 ~~~~~~~~~~~~~~aV~vG--~~~s~A~y~l~~~~eV~~~L~~l~~~~ 837 (854)
... .++|.|| .+.+.|+|+|+++++|..+|+.|+.-.
T Consensus 342 ~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 342 GNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred cCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 211 1566666 468999999999999999999998644
No 20
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.94 E-value=2.1e-25 Score=239.48 Aligned_cols=226 Identities=22% Similarity=0.302 Sum_probs=157.4
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcc-cceeecCcEEEEECCC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK-LGLSAEHGYFTRWSKN 661 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-l~liaenG~~I~~~~~ 661 (854)
|++|+|++|+||||++ +++.++++++++|+++ +++|+.|+|+|||+...+.+++..+.. .+++++||++|.+.++
T Consensus 1 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 76 (264)
T COG0561 1 MMIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGE 76 (264)
T ss_pred CCeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCc
Confidence 5789999999999999 7888999999999999 999999999999999999999977643 3689999999999955
Q ss_pred cceEEccccccchHHHHHHHHHHHHhcc--C-------CcceEeccc-----ceEEE-----eeccC---CC--ccc---
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKLYTET--T-------DGSFIEDKE-----TAIVW-----HHQHA---DP--HFG--- 714 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~y~~~--~-------~g~~ie~k~-----~~l~~-----~~~~~---d~--~~~--- 714 (854)
..+...++. +.+..+.+...+. . .+.+..... ..... ..... +. .+.
T Consensus 77 ~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
T COG0561 77 LLFQKPLSR------EDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK 150 (264)
T ss_pred EEeeecCCH------HHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec
Confidence 555444332 2223332222111 0 111100000 00000 00000 00 000
Q ss_pred -hhhHHHHHHHHHHHhcCCCEEEEEcCe-EEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 715 -SCQAKELLDHLENVLANEPVVVKRGQH-IVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 715 -~~~~~el~~~l~~~l~~~~~~v~~g~~-~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.....++...+.+.+......+.++.. .+||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~- 226 (264)
T COG0561 151 DHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL- 226 (264)
T ss_pred ChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe-
Confidence 112334444455555544455555544 4999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHHh
Q 003042 793 VADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLAT 835 (854)
Q Consensus 793 ~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~~ 835 (854)
+|+||++ +..|++++. +.++|...|+++..
T Consensus 227 -------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 -------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred -------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 6888876 467887654 57889999988754
No 21
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.93 E-value=7.5e-26 Score=243.67 Aligned_cols=231 Identities=18% Similarity=0.265 Sum_probs=154.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcc----cceeecCcEEEEE
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK----LGLSAEHGYFTRW 658 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~----l~liaenG~~I~~ 658 (854)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+..++..+.- .++++.||+.|..
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 1 MAIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred CceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 4689999999999999 7889999999999999 899999999999999999988866531 2479999999986
Q ss_pred C--CCcceEEccccccch-HHHHHHHH-HHHHhccCCcceEecccce-----------EEEeec---cCCCc--c-----
Q 003042 659 S--KNSAWEICSLTRDFD-WKEIAEPV-MKLYTETTDGSFIEDKETA-----------IVWHHQ---HADPH--F----- 713 (854)
Q Consensus 659 ~--~~~~~~~~~~~~~~~-~~~~v~~~-~~~y~~~~~g~~ie~k~~~-----------l~~~~~---~~d~~--~----- 713 (854)
. +...+...++..... +.+.+++. +..+.....+.+....... ....+. ..++. +
T Consensus 77 ~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (270)
T PRK10513 77 AADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMM 156 (270)
T ss_pred CCCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEE
Confidence 3 334454444332221 11111110 0000001112222111100 000000 00000 0
Q ss_pred -c-hhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 714 -G-SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 714 -~-~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
. .....++.+.+.+.+......+.++..++||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~ 233 (270)
T PRK10513 157 IDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMIEYAGV 233 (270)
T ss_pred eCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhCCc
Confidence 0 0112233333433333333445677789999999999999999999999 9999999999999999999999996
Q ss_pred hcCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHH
Q 003042 792 AVADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 792 ~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
+|+||++ +..|+|++. +.++|.++|+++.
T Consensus 234 --------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 234 --------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred --------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 6777775 578999885 4678999998874
No 22
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.93 E-value=5.1e-25 Score=237.50 Aligned_cols=229 Identities=17% Similarity=0.187 Sum_probs=153.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEE-CCC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRW-SKN 661 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~-~~~ 661 (854)
++|+|++||||||++ .++.++++++++|+++ +++|+.|++||||+...+..++..+. ..++++.||+.|+. .+.
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 379999999999999 7889999999999999 89999999999999999999886653 34578999999986 333
Q ss_pred cceEEccccccchHHHHHHHHHHH----HhccCCcceEecccc---------eEEEee---ccCC-Ccc------c-hhh
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKL----YTETTDGSFIEDKET---------AIVWHH---QHAD-PHF------G-SCQ 717 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~----y~~~~~g~~ie~k~~---------~l~~~~---~~~d-~~~------~-~~~ 717 (854)
..+...++... +.+.+....+. +.....+.+...... ...... .... ... . ...
T Consensus 77 ~l~~~~i~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~ 154 (272)
T PRK15126 77 LLHRQDLPADV--AELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDD 154 (272)
T ss_pred EEEeecCCHHH--HHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHH
Confidence 34444433221 11211111000 000011111110000 000000 0000 000 0 112
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCC
Q 003042 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPS 797 (854)
Q Consensus 718 ~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~ 797 (854)
..++...+.+.+......+.++..++||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 155 ~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~------ 225 (272)
T PRK15126 155 LTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR------ 225 (272)
T ss_pred HHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC------
Confidence 2333444444444333445566789999999999999999999999 9999999999999999999999996
Q ss_pred CCCCccEEEEEecCC----Ccccce--EeC--CHhHHHHHHHHHHh
Q 003042 798 VPGIAEVFACTVGQK----PSMAKY--YLD--DTAEVINLLEGLAT 835 (854)
Q Consensus 798 ~~~~~~~~aV~vG~~----~s~A~y--~l~--~~~eV~~~L~~l~~ 835 (854)
+|+||++ +..|+| ++. +.++|.++|+++..
T Consensus 226 --------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 --------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred --------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 5777775 466776 553 56789999999873
No 23
>PRK10976 putative hydrolase; Provisional
Probab=99.93 E-value=7e-26 Score=243.38 Aligned_cols=223 Identities=18% Similarity=0.196 Sum_probs=150.3
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEEC-CCc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS-KNS 662 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~-~~~ 662 (854)
+|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||+...+.+++..+. ..++++.||+.|+.. +..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 79999999999999 7788999999999999 89999999999999999998886653 335789999999864 333
Q ss_pred ceEEccccccchHHHHHHHHHHHHhc---------cCCcceEecccc-----------eEEEe-eccCCC-cc----c--
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLYTE---------TTDGSFIEDKET-----------AIVWH-HQHADP-HF----G-- 714 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y~~---------~~~g~~ie~k~~-----------~l~~~-~~~~d~-~~----~-- 714 (854)
.+...++.. .+.++++...+ ...+.+...... ..... ...... .. .
T Consensus 78 i~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~ 151 (266)
T PRK10976 78 IFSHNLDRD------IASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC 151 (266)
T ss_pred ehhhcCCHH------HHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc
Confidence 333333221 12222221111 111112111000 00000 000000 00 0
Q ss_pred --hhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 715 --SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 715 --~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.....++.+.+.+.+......+.++..++||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~- 227 (266)
T PRK10976 152 DSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK- 227 (266)
T ss_pred CCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC-
Confidence 0112223334444443333445567789999999999999999999999 9999999999999999999999997
Q ss_pred cCCCCCCCCccEEEEEecCC----Ccccc--eEeC--CHhHHHHHHHHHH
Q 003042 793 VADPSVPGIAEVFACTVGQK----PSMAK--YYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 793 ~~~~~~~~~~~~~aV~vG~~----~s~A~--y~l~--~~~eV~~~L~~l~ 834 (854)
+|+||++ +..|+ +++. +.++|.++|+++.
T Consensus 228 -------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 -------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred -------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 5777775 46665 6664 5678999998875
No 24
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.93 E-value=1.1e-24 Score=245.48 Aligned_cols=301 Identities=18% Similarity=0.159 Sum_probs=207.6
Q ss_pred hhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh
Q 003042 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL 245 (854)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll 245 (854)
...+..|...++.++.++....++ |+||+||++.+.++...+. ..+|+.+++|.++.... + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 446788888888887764444444 9999999998877766553 36789999999885431 0 01122233344
Q ss_pred cCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--
Q 003042 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (854)
Q Consensus 246 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 323 (854)
.+|.+.+.+.++++.++ ..+ ++ ++|+|||+.........+ .....+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~~~~~---~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNRELSP---ADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccCCCCH---HHHHHHHHHhCC
Confidence 57777776643322111 111 23 899999975322111111 2233455555
Q ss_pred -CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 324 -~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+++|..... .++..++.+++.+ +.+ ...
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~~~~---~~~------~~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEEVLE---YAE------GDP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHHHHH---HhC------CCC
Confidence 478899999999999999999999999988888765 8888864321 1222333232222 211 112
Q ss_pred cEEEEcCC-CChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc
Q 003042 403 PIVIIKEP-LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (854)
Q Consensus 403 pv~~~~~~-~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (854)
.++++... ++.+++.++|++||+|++||.+||||++++|||+| |.|+|+|+.+|..+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~---------------------G~Pvv~s~~~~~~~~ 311 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK---------------------GKPVIAGPVGGIPLQ 311 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc---------------------CCCEEEcCCCCchhh
Confidence 35555543 48999999999999999999999999999999999 459999999998887
Q ss_pred CC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHH
Q 003042 482 LS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 482 l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
+. .|+++++ .+++|++|.++++++ ++++.+.+..++++ .++++...++++++.+++
T Consensus 312 i~~~~~g~~~~~--~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 312 IEDGETGFLVDT--VEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cccCCceEEeCC--cHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 73 3777764 678999999999865 45556666667766 579999999999887764
No 25
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=5.7e-24 Score=223.42 Aligned_cols=217 Identities=21% Similarity=0.232 Sum_probs=148.0
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEEC--
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS-- 659 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~-- 659 (854)
|++|+|++||||||++ .++.+++++.++|+++ +++|+.|+|||||+...+..++..++ ..+++++||+.+...
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 1 MKIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFD 76 (230)
T ss_pred CceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCC
Confidence 4679999999999999 7888999999999999 89999999999999999988776553 346889999999876
Q ss_pred CCcceEEccccccchHHHHHHHHHHHHhccCCcceEecc-cceE--EEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDK-ETAI--VWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k-~~~l--~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
+...+...++ ...+.+....+.|.... ..+.... .... ...+.. ...+++.+.++. +. ....+
T Consensus 77 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~-~~-~~~~~ 142 (230)
T PRK01158 77 GKRIFLGDIE----ECEKAYSELKKRFPEAS-TSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEE-LG-LDLEI 142 (230)
T ss_pred CCEEEEcchH----HHHHHHHHHHHhccccc-eeeecCCcccccceeeeccc-------ccHHHHHHHHHH-cC-CcEEE
Confidence 3333333221 12222222222221110 0000000 0000 000000 011222222322 21 12445
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
..+..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.+|. +|+||++
T Consensus 143 ~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~v 205 (230)
T PRK01158 143 VDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADEEL 205 (230)
T ss_pred EecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccHHH
Confidence 555678999999999999999999999 9999999999999999999999986 5777775
Q ss_pred CcccceEeC--CHhHHHHHHHHHH
Q 003042 813 PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 813 ~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
+..|+|++. +.++|.+.|+++.
T Consensus 206 k~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 206 KEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHhcceEecCCCcChHHHHHHHHh
Confidence 478999885 4677999998763
No 26
>PLN02887 hydrolase family protein
Probab=99.91 E-value=1e-23 Score=244.77 Aligned_cols=230 Identities=19% Similarity=0.200 Sum_probs=154.1
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc---cc-------
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KL------- 646 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~l------- 646 (854)
.+.| ++++|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||+...+..++..+. ..
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~ 375 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESS 375 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecc
Confidence 3444 56799999999999999 7889999999999999 99999999999999999988876542 11
Q ss_pred ceeecCcEEEEEC-CCcceEEccccccchHHHHHHHHHHHHhc--------cCCcceEecccceEE-Ee--e--------
Q 003042 647 GLSAEHGYFTRWS-KNSAWEICSLTRDFDWKEIAEPVMKLYTE--------TTDGSFIEDKETAIV-WH--H-------- 706 (854)
Q Consensus 647 ~liaenG~~I~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~y~~--------~~~g~~ie~k~~~l~-~~--~-------- 706 (854)
+.++.||+.|+.. +...+...++.. .+.++++...+ ..++.|......... .+ +
T Consensus 376 p~I~~NGA~I~d~~g~~I~~~~L~~e------~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i 449 (580)
T PLN02887 376 PGVFLQGLLVYGRQGREIYRSNLDQE------VCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIM 449 (580)
T ss_pred cEEeecCeEEEECCCcEEEEEeCCHH------HHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccccc
Confidence 3456689888753 333444443322 22222221111 111222110000000 00 0
Q ss_pred ---ccC-C-Ccc---ch-hh----HHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeE
Q 003042 707 ---QHA-D-PHF---GS-CQ----AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFV 773 (854)
Q Consensus 707 ---~~~-d-~~~---~~-~~----~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~v 773 (854)
.+. . ... .. .. ..++...+.+.+......+.++..++||+|+|+|||.|++.+++++ |++++++
T Consensus 450 ~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eev 526 (580)
T PLN02887 450 SSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEI 526 (580)
T ss_pred CCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHE
Confidence 000 0 000 00 00 1123333444444334456677889999999999999999999999 9999999
Q ss_pred EEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHH
Q 003042 774 LCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 774 laiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
++|||+.||++||+.+|. +|+||++ +..|+|++. +.++|.+.|++++
T Consensus 527 iAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 527 MAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 999999999999999996 6888876 578999885 5688999998763
No 27
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.91 E-value=6.6e-23 Score=231.74 Aligned_cols=269 Identities=19% Similarity=0.276 Sum_probs=197.5
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhC
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg 270 (854)
.|+|+||+. +-+...++++.|++++.+.+|..|.. +.++ .++.|-+.+. +.+.++.. .+
T Consensus 100 ~~vi~v~~~--~~~~~~~~~~~~~~~~v~~~h~~~~~-~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNS--MKLYRQIRERAPQAKLVMHMHNAFEP-ELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCc--HHhHHHHHhhCCCCCEEEEEecccCh-hHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 499999973 34556678889999999999977632 1221 3677766654 44444331 00
Q ss_pred ccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCHHHHHHH
Q 003042 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLA 347 (854)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi~~~l~A 347 (854)
...++.++|+|||...|... .. ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----PQ---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----ch---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01246789999998877521 11 1233343 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEE
Q 003042 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427 (854)
Q Consensus 348 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~v 427 (854)
+.++.+++|+++ |+++|.+......+..++.+++.+++.+++. .+ .+.|.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v-~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RC-IMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cE-EEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999765 8888865432222334566677666655431 23 4666789999999999999999
Q ss_pred EccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---Cce-EeCCCCHHHHHHHHHH
Q 003042 428 VNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI-RVNPWNVDAVADAMDS 502 (854)
Q Consensus 428 v~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~vnP~d~~~~A~ai~~ 502 (854)
+||. .||||++++|||+| |.|+|+|..+|..+.+. .|+ +++|.|++++|++|.+
T Consensus 282 ~pS~~~E~f~~~~lEAma~---------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ 340 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA---------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR 340 (380)
T ss_pred eCCCCccccccHHHHHHHc---------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH
Confidence 9997 49999999999999 45999999988888773 265 6789999999999999
Q ss_pred HhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHHHHHHH
Q 003042 503 ALQMENQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 503 aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 540 (854)
++++++. + .+.++.+++ ..++++...++++++.++.
T Consensus 341 ll~d~~~-~-~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 341 TLADPEL-T-QIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHcCHHH-H-HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9988753 3 344555554 4679999999999988865
No 28
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.91 E-value=8.9e-24 Score=227.58 Aligned_cols=226 Identities=15% Similarity=0.127 Sum_probs=147.0
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc--ccceeecCcEEEEECCC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE--KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~--~l~liaenG~~I~~~~~ 661 (854)
.+|+|++|+||||++ +++.+++.++++|++| +++|+.|++||||+...+..++..+. ..+++++||+.|+.+..
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999999 7778899999999999 89999999999999999999887653 24689999999987643
Q ss_pred c-------ceEEccccccchHHHHHHHHHHHHhccCC-cceEecc----c-ceEE-Ee-----eccCCC---ccchhhHH
Q 003042 662 S-------AWEICSLTRDFDWKEIAEPVMKLYTETTD-GSFIEDK----E-TAIV-WH-----HQHADP---HFGSCQAK 719 (854)
Q Consensus 662 ~-------~~~~~~~~~~~~~~~~v~~~~~~y~~~~~-g~~ie~k----~-~~l~-~~-----~~~~d~---~~~~~~~~ 719 (854)
. .+...++.. .+..+++...+... ....... . .... .. ...... .+......
T Consensus 82 ~~~~~~~~~~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGISHG------EIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCCHH------HHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 112222211 12222211111000 0000000 0 0000 00 000000 00000001
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCC---CCCeEEEEeCCcccHHHHHHhhhhcCCC
Q 003042 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGK---SPDFVLCIGDDRSDEDMFESIEQAVADP 796 (854)
Q Consensus 720 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi---~~d~vlaiGDs~ND~~Mf~~ag~~~~~~ 796 (854)
+....+.+.+....+.+..+..++||+|+++|||.|++++++++ |+ +++++++|||+.||++||+.+|.
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~----- 227 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY----- 227 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE-----
Confidence 12222333332223344455578999999999999999999999 99 99999999999999999999985
Q ss_pred CCCCCccEEEEEecCCC----------cccceEeC--CHhHHHHHHHHHHhc
Q 003042 797 SVPGIAEVFACTVGQKP----------SMAKYYLD--DTAEVINLLEGLATE 836 (854)
Q Consensus 797 ~~~~~~~~~aV~vG~~~----------s~A~y~l~--~~~eV~~~L~~l~~~ 836 (854)
+|+||+.. ..|+|+++ +.+++.+.|+++..+
T Consensus 228 ---------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 ---------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred ---------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 67777432 25778886 467999999988764
No 29
>PLN02939 transferase, transferring glycosyl groups
Probab=99.91 E-value=1.1e-22 Score=241.53 Aligned_cols=320 Identities=14% Similarity=0.135 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhc-----cCCCeEEEEecCC-----CCChhhhhc-CCC
Q 003042 169 WQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSP-----FPSSEIYRT-LPV 236 (854)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~-----~~~~~i~~flH~p-----fP~~e~~~~-lp~ 236 (854)
...|.-+.+..++-+... .+| |||++||+|-.++|.++.+. +.++++.|++|-- ||...+..+ +|+
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~ 667 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDV 667 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCH
Confidence 344555556666555432 356 89999999999985544432 4568999999954 332222111 221
Q ss_pred ---------------hHHHH-HHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCc
Q 003042 237 ---------------RDEIL-KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHM 300 (854)
Q Consensus 237 ---------------r~eil-~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~ 300 (854)
+-.++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||+
T Consensus 668 ~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~ 736 (977)
T PLN02939 668 HQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDT 736 (977)
T ss_pred HHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceeh
Confidence 11223 3677899999889999987654 11011110 122345578899999999
Q ss_pred hHHHhhhCC-------c----hHHHHHHHHHHHcC------CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEE
Q 003042 301 GQFESIMSL-------D----VTGQKVKELKEKFD------GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVV 363 (854)
Q Consensus 301 ~~~~~~~~~-------~----~~~~~~~~l~~~~~------~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vv 363 (854)
+.|.+.... . ........++++++ +.++|++|||+++.||+..++.|+.++++ ++ +.
T Consensus 737 e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vq 810 (977)
T PLN02939 737 DTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQ 810 (977)
T ss_pred hhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CE
Confidence 988643210 0 00112345677762 35899999999999999999999998875 33 44
Q ss_pred EEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeee
Q 003042 364 LVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYT 443 (854)
Q Consensus 364 Lvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~ 443 (854)
||++|. |++ ..+++++..++.+.+ ..+.+.|.+.++..+...+|+.||+||+||.+|||||+.+|||
T Consensus 811 LVIvGd-----Gp~-~~~e~eL~~La~~l~-------l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAM 877 (977)
T PLN02939 811 FVLLGS-----SPV-PHIQREFEGIADQFQ-------SNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAM 877 (977)
T ss_pred EEEEeC-----CCc-HHHHHHHHHHHHHcC-------CCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHH
Confidence 777773 222 134555666665532 1223444556777777899999999999999999999999999
Q ss_pred eeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC------------CceEeCCCCHHHHHHHHHHHhc---CCH
Q 003042 444 VSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ---MEN 508 (854)
Q Consensus 444 a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~---m~~ 508 (854)
+| |.|+|++..+|..+.+. +|++++|.|+++++++|.+++. ..+
T Consensus 878 Ay---------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dp 936 (977)
T PLN02939 878 RY---------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKP 936 (977)
T ss_pred HC---------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCH
Confidence 99 45999999999887662 4899999999999999999986 233
Q ss_pred HHHHHHHHHHhccccccChHHHHHHHHHHHHHHHH
Q 003042 509 QEKILRHEKHYKYISSHDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 509 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 543 (854)
+.++...++. ....+++...++++++-..++..
T Consensus 937 e~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 937 EVWKQLVQKD--MNIDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred HHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 3333332222 23568999999998877766543
No 30
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.91 E-value=8.6e-23 Score=235.18 Aligned_cols=315 Identities=15% Similarity=0.111 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChh--hhh------------c
Q 003042 169 WQAYLSANKVFADKVMEVI-NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSE--IYR------------T 233 (854)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~~-~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e--~~~------------~ 233 (854)
|.....+...+...+.+.. +| |+|++|+++--++..++++.. ++|+.++.|....... +.. .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4444444455555443322 45 999999987666666665544 6789999997532210 000 0
Q ss_pred CCChHH-HHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchH
Q 003042 234 LPVRDE-ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVT 312 (854)
Q Consensus 234 lp~r~e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~ 312 (854)
++.+-. ....+..+|.|-..+...++.-+. .. .+-...++.++|+|||++.|.+....+..
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~---------------~~~~~~ki~vIpnGvd~~~f~~~~~~~~~ 232 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA---LY---------------DSYQPERMQVIPPGVDLSRFYPPQSSEET 232 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hc---------------cCCCccceEEECCCcChhhcCCCCccccc
Confidence 011100 011233466555544332221110 00 01123467889999999988643221111
Q ss_pred HHHHHHHHHHc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHH----HHHHHHH
Q 003042 313 GQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQ----DLLSDTN 386 (854)
Q Consensus 313 ~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~----~l~~~v~ 386 (854)
......+++.. +++++|++|||+++.||+..+|+||.++.+..+.. ++++ .+|... +.+.++ ++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~ 307 (439)
T TIGR02472 233 SEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVL 307 (439)
T ss_pred hhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHH
Confidence 11111222221 46789999999999999999999998643221111 2332 234211 111111 2223334
Q ss_pred HHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC----cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCC
Q 003042 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462 (854)
Q Consensus 387 ~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A----Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~ 462 (854)
.++++ .++...+.|.+.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 308 ~~~~~-------~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~----------------- 363 (439)
T TIGR02472 308 LLIDR-------YDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC----------------- 363 (439)
T ss_pred HHHHH-------cCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh-----------------
Confidence 44444 3344456678889999999999988 9999999999999999999999
Q ss_pred CCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHH
Q 003042 463 PPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 463 ~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 538 (854)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++.+. +++...++.++++ .++++..-++++++-|
T Consensus 364 ----G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ----GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSS-QWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ----CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45999999999888883 4899999999999999999998664 4555666666655 5689999888887654
No 31
>PLN02316 synthase/transferase
Probab=99.91 E-value=2.1e-22 Score=243.52 Aligned_cols=309 Identities=13% Similarity=0.108 Sum_probs=216.6
Q ss_pred cHHHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhc-----cCCCeEEEEecCCCCChhhhhcCCChHHHH
Q 003042 168 EWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSPFPSSEIYRTLPVRDEIL 241 (854)
Q Consensus 168 ~w~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~-----~~~~~i~~flH~pfP~~e~~~~lp~r~eil 241 (854)
....|..+++..++.+... .+| |||++||.|-.++|.++++. +.++++.++.|-.- |. +..+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHH
Confidence 3445556666666655432 345 99999999999999999875 35689999999431 11 12244
Q ss_pred HHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhC-------Cch---
Q 003042 242 KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMS-------LDV--- 311 (854)
Q Consensus 242 ~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~-------~~~--- 311 (854)
.++..||.|---++.|++..+.. + . + ..+..++.++|+|||++.|.+... +.+
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~-----~--------~--l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN-----S--------A--I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc-----c--------C--c--ccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999998899888775531 0 0 0 112346789999999988754311 000
Q ss_pred --HHHHHHHHHHHcC----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHH
Q 003042 312 --TGQKVKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDT 385 (854)
Q Consensus 312 --~~~~~~~l~~~~~----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v 385 (854)
.......+++++. +.++|++||||++.||+..+++|+.++++. + +.||++|. |++ ..+++++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHH
Confidence 0122345666662 578999999999999999999999999863 2 34676763 233 2456677
Q ss_pred HHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCC
Q 003042 386 NRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQ 465 (854)
Q Consensus 386 ~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~ 465 (854)
.+++.+++..+.. .|.+. +..+......+|++||+||+||..|||||+.+|||+|
T Consensus 888 ~~La~~Lg~~~~~----rV~f~-g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------- 942 (1036)
T PLN02316 888 VNLANQLHSSHHD----RARLC-LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------- 942 (1036)
T ss_pred HHHHHHhCccCCC----eEEEE-ecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc--------------------
Confidence 7777776544321 24433 3344433348999999999999999999999999999
Q ss_pred CCceEEEecCccccccC-C---------------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChH
Q 003042 466 KKSVIIVSEFIGCSPSL-S---------------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVA 528 (854)
Q Consensus 466 ~~g~lV~Se~~G~~~~l-~---------------~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~ 528 (854)
|.|+|++..+|..+.+ + .|++|+|.|++++++||.++|......+....+..++.+ ..+++.
T Consensus 943 -GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~ 1021 (1036)
T PLN02316 943 -GSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWN 1021 (1036)
T ss_pred -CCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHH
Confidence 4589999999999887 2 389999999999999999999864333333333334443 458999
Q ss_pred HHHHHHHHHHHHHH
Q 003042 529 YWAKSIDQDLERAC 542 (854)
Q Consensus 529 ~W~~~~l~~l~~~~ 542 (854)
.-+.++++-.+++.
T Consensus 1022 ~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1022 RPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999887776654
No 32
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.90 E-value=4.2e-23 Score=222.42 Aligned_cols=229 Identities=18% Similarity=0.211 Sum_probs=148.3
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEEC-C
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS-K 660 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~-~ 660 (854)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+..++..+. ..++++.||+.|+.. +
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~ 76 (272)
T PRK10530 1 MTYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQA 76 (272)
T ss_pred CCccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCC
Confidence 4689999999999999 7888999999999999 89999999999999999998887663 345899999999864 2
Q ss_pred Cc-ceEEccccccc-hHHHHHHHH-HHHHhccCCcceEeccc----------ceEEE----eeccCCC--------c---
Q 003042 661 NS-AWEICSLTRDF-DWKEIAEPV-MKLYTETTDGSFIEDKE----------TAIVW----HHQHADP--------H--- 712 (854)
Q Consensus 661 ~~-~~~~~~~~~~~-~~~~~v~~~-~~~y~~~~~g~~ie~k~----------~~l~~----~~~~~d~--------~--- 712 (854)
+. .+...++.... .+.+.+++. ...+.....+.+..... ..... .+...+. .
T Consensus 77 ~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T PRK10530 77 KKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIW 156 (272)
T ss_pred CEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcE
Confidence 32 33333332211 111111110 00000000111111000 00000 0000000 0
Q ss_pred -cch-----hhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHH
Q 003042 713 -FGS-----CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMF 786 (854)
Q Consensus 713 -~~~-----~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf 786 (854)
+.. ....++.+.+.+.+. .....++..++|+.+++++||.+++.+++++ |++++++++|||+.||++||
T Consensus 157 ~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi~m~ 231 (272)
T PRK10530 157 KFALTHEDLPQLQHFAKHVEHELG--LECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDISML 231 (272)
T ss_pred EEEEecCCHHHHHHHHHHHhhhcC--ceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhHHHH
Confidence 000 011222222222221 1233455678999999999999999999999 99999999999999999999
Q ss_pred HHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHH
Q 003042 787 ESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 787 ~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
+.+|. +|+||++ +..|+|+++ +.++|.++|+++.
T Consensus 232 ~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 232 EAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 99985 6777775 467999885 4677999998764
No 33
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.90 E-value=5.1e-23 Score=217.84 Aligned_cols=220 Identities=23% Similarity=0.338 Sum_probs=153.0
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCc-ceE
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS-AWE 665 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~-~~~ 665 (854)
|++|+||||++ ++..++++++++|++| +++|+.++++|||++..+.+++..++ ..++++.||+++....+. .+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7888999999999999 88999999999999999999997664 358899999999444333 344
Q ss_pred EccccccchHHHHHHHHHHH----HhccCCcceEeccc-----------ceEEEeec--c--CCCc-----c--chhhHH
Q 003042 666 ICSLTRDFDWKEIAEPVMKL----YTETTDGSFIEDKE-----------TAIVWHHQ--H--ADPH-----F--GSCQAK 719 (854)
Q Consensus 666 ~~~~~~~~~~~~~v~~~~~~----y~~~~~g~~ie~k~-----------~~l~~~~~--~--~d~~-----~--~~~~~~ 719 (854)
..++.. .+.+.++...+. +.....+.+..... ........ . .... + ......
T Consensus 77 ~~i~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~ 154 (254)
T PF08282_consen 77 KPIDSD--DVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLE 154 (254)
T ss_dssp ESB-HH--HHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHH
T ss_pred hheecc--chhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhh
Confidence 433311 122222221111 01111122222110 00000000 0 0000 0 113445
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCC
Q 003042 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVP 799 (854)
Q Consensus 720 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~ 799 (854)
.+.+.+.+.+.+....+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||+.++.
T Consensus 155 ~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~-------- 223 (254)
T PF08282_consen 155 QLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY-------- 223 (254)
T ss_dssp HHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE--------
T ss_pred hhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe--------
Confidence 56677777766655677889999999999999999999999999 9999999999999999999999985
Q ss_pred CCccEEEEEecCC----CcccceEeCCH--hHHHHHH
Q 003042 800 GIAEVFACTVGQK----PSMAKYYLDDT--AEVINLL 830 (854)
Q Consensus 800 ~~~~~~aV~vG~~----~s~A~y~l~~~--~eV~~~L 830 (854)
+|+||++ +..|++++.+. ++|++.|
T Consensus 224 ------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 7888876 57899988643 6677654
No 34
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.90 E-value=2.3e-22 Score=233.31 Aligned_cols=294 Identities=18% Similarity=0.194 Sum_probs=196.0
Q ss_pred CeEEEeCcccchHHHHHHhcc----CCCeEEEEecCCCC----ChhhhhcC--CC-------------hHHHHHHhhcCC
Q 003042 192 DYVWIHDYHLMVLPSFLRKRF----HRVKVGFFLHSPFP----SSEIYRTL--PV-------------RDEILKSLLNSD 248 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~----~~~~i~~flH~pfP----~~e~~~~l--p~-------------r~eil~~ll~~d 248 (854)
|+|++||+|--++|.+++++. .++++.++.|..-. ..+.+..+ |. ..-+-.++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 46899999997521 11111111 10 111223456677
Q ss_pred eEeecCHHHHHHHHHHHHhhhCccccccCceeeE--EECCeEEEEEEeccccCchHHHhhhCC-------c----hHHHH
Q 003042 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGL--DYFGRTVSIKILPVGIHMGQFESIMSL-------D----VTGQK 315 (854)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i--~~~gr~~~i~v~p~GId~~~~~~~~~~-------~----~~~~~ 315 (854)
.|---++.|++..... ..| . ++ .+..+..++.++|+|||.+.|.+.... + .....
T Consensus 200 ~vitvS~~~~~ei~~~---~~~------~---gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG------Y---GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC------c---ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 7666666666543210 000 0 00 001223468899999999988642110 0 01122
Q ss_pred HHHHHHHcC----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 003042 316 VKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (854)
Q Consensus 316 ~~~l~~~~~----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~ 391 (854)
.+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+++|.+ + ..+++++++++.+
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998754 3 447777742 1 1244555555554
Q ss_pred HhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEE
Q 003042 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (854)
Q Consensus 392 In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (854)
.+. .++++.+. +.+....+|+.||+||+||.+||||++.+|||+| |.|+|
T Consensus 335 ~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~---------------------G~p~V 384 (466)
T PRK00654 335 YPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY---------------------GTLPI 384 (466)
T ss_pred CCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC---------------------CCCEE
Confidence 321 25555553 5566779999999999999999999999999999 45999
Q ss_pred EecCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 472 VSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 472 ~Se~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
+|..+|..+.+ + .|++|+|.|+++++++|.+++.. .++.++...++.. ...+++..-++++++-.++
T Consensus 385 ~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 385 VRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRR 462 (466)
T ss_pred EeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHH
Confidence 99999999887 3 38999999999999999999863 2222222222222 2568999988888776665
Q ss_pred HH
Q 003042 541 AC 542 (854)
Q Consensus 541 ~~ 542 (854)
+.
T Consensus 463 ~~ 464 (466)
T PRK00654 463 LL 464 (466)
T ss_pred Hh
Confidence 43
No 35
>PRK14098 glycogen synthase; Provisional
Probab=99.90 E-value=1.5e-22 Score=234.90 Aligned_cols=318 Identities=14% Similarity=0.165 Sum_probs=214.0
Q ss_pred hcHHHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhcc------CCCeEEEEecCCC-----CChhhhhcC
Q 003042 167 GEWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIYRTL 234 (854)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~------~~~~i~~flH~pf-----P~~e~~~~l 234 (854)
+....|.-.++..++.+... ++| |+|++||+|-.++|.+++++. .++|+.++.|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44567777777777766542 356 999999999999999998764 4789999999742 211111113
Q ss_pred CCh------------HHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchH
Q 003042 235 PVR------------DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302 (854)
Q Consensus 235 p~r------------~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~ 302 (854)
|+. .-+-.++..||.|---++.|++.-.+....-.|++. . ...+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~-----~----l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK-----V----LEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH-----H----HHhcCCCeeEEeCCccccc
Confidence 321 112235677888877788777764320000001110 0 0113457889999999998
Q ss_pred HHhhhCCch------------HHHHHHHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003042 303 FESIMSLDV------------TGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (854)
Q Consensus 303 ~~~~~~~~~------------~~~~~~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 365 (854)
|.+... +. .......+++++ +++++|++|||+++.||+..+++|+.++++. + +.|+
T Consensus 268 ~~p~~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lv 340 (489)
T PRK14098 268 WNPSTD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLV 340 (489)
T ss_pred cCCccc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEE
Confidence 864321 10 011123445544 2567999999999999999999999998752 3 5588
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
++|.. + ..+++++++++.+. + ..+.+.+.++.+++..+|++||+||+||..||||++.+|||+|
T Consensus 341 ivG~G-----~--~~~~~~l~~l~~~~----~-----~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~ 404 (489)
T PRK14098 341 ICGSG-----D--KEYEKRFQDFAEEH----P-----EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY 404 (489)
T ss_pred EEeCC-----C--HHHHHHHHHHHHHC----C-----CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC
Confidence 88842 2 12445555555542 1 1233445688899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHH
Q 003042 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHE 516 (854)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~ai~vnP~d~~~~A~ai~~aL~m--~~~er~~r~~ 516 (854)
|.|+|++..+|..+.+. .|++++|.|++++|++|.+++.+ .++..+...+
T Consensus 405 ---------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~ 463 (489)
T PRK14098 405 ---------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVL 463 (489)
T ss_pred ---------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 45899999999887772 48999999999999999998743 2222222221
Q ss_pred HHhccccccChHHHHHHHHHHHHHH
Q 003042 517 KHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
+. ..+.+++..-++++++-.+++
T Consensus 464 ~~--~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 464 EA--MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred HH--hcCCCChHHHHHHHHHHHHHH
Confidence 11 235689999999887766654
No 36
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.90 E-value=3.8e-23 Score=213.13 Aligned_cols=194 Identities=27% Similarity=0.390 Sum_probs=147.1
Q ss_pred EEEEecCCCCCCCCCCC-CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceE
Q 003042 587 LILLDYDGTVMPQTSED-KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWE 665 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~-~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~ 665 (854)
+|++|+||||++ .+ ..+++++.++|++| .+.|+.++++|||+...+..++..+ +.+++++||++|+.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 55 78999999999999 7788999999999999999998764 478999999999987766666
Q ss_pred Ecccccc-chHH---HHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC-CCEEEE-Ec
Q 003042 666 ICSLTRD-FDWK---EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN-EPVVVK-RG 739 (854)
Q Consensus 666 ~~~~~~~-~~~~---~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~-~~~~v~-~g 739 (854)
. +... ..+. +.+...+..+.+..++...+.+...+.+++.... .......++.+.++....+ ..+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1122 1222234444556667777888888888887641 1111223344444433221 335565 79
Q ss_pred CeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 740 QHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 740 ~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
...+||+|++++|+.+++.+++++ |++++++++|||+.||++||+.++.+
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999999 99999999999999999999999874
No 37
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.89 E-value=2.2e-21 Score=221.08 Aligned_cols=286 Identities=17% Similarity=0.196 Sum_probs=206.8
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhc---CCC--hHHHH--HHhhcCCeEeecCHHHHHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT---LPV--RDEIL--KSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~---lp~--r~eil--~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
|+|++|++.-.+++.++++ ..++|+.+++|..++-...+.. .|. ...++ ..+-.+|.|.+.+...++.+...
T Consensus 103 Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~ 181 (405)
T TIGR03449 103 DLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRH 181 (405)
T ss_pred CeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH
Confidence 9999998665555555554 4468899999975432111111 111 11222 13457899999998887776542
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi 341 (854)
.+ ....++.++|+|||.+.|.+. + ....++++ .++++|+++||+.+.||+
T Consensus 182 ----~~---------------~~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~~ 234 (405)
T TIGR03449 182 ----YD---------------ADPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKAP 234 (405)
T ss_pred ----cC---------------CChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccCH
Confidence 11 122467889999999887531 1 11233444 367899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCh-hHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSG-KDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
..+++|++++++++|+. ++.|+++|.+. +++ +..++++ +++.+ .+..+.+.+.|.++.+++..+|
T Consensus 235 ~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~~l~----~~~~~-------~~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 235 DVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPDALI----ELAAE-------LGIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHHHHH----HHHHH-------cCCCceEEECCCCCHHHHHHHH
Confidence 99999999999998873 47788888654 223 3333343 34433 2344556677889999999999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
+.||++++||..||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|++++|
T Consensus 301 ~~ad~~v~ps~~E~~g~~~lEAma~---------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la 359 (405)
T TIGR03449 301 RAADVVAVPSYNESFGLVAMEAQAC---------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWA 359 (405)
T ss_pred HhCCEEEECCCCCCcChHHHHHHHc---------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHH
Confidence 9999999999999999999999999 45999999988887773 37999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
++|.++++.++ .+....+..++.+.++++...++++++-+.++
T Consensus 360 ~~i~~~l~~~~-~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 360 DALARLLDDPR-TRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999998654 44455555666777899999999888777654
No 38
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.89 E-value=1e-21 Score=223.58 Aligned_cols=283 Identities=14% Similarity=0.142 Sum_probs=199.2
Q ss_pred HHhcCCCCCeEEEeCcccch-HHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHH-hhcCCeEeecCHHHHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMV-LPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~-ll~~dligf~t~~~~~~F 261 (854)
++..+| |+|++|+++-.+ ....+..+..++|+.+..|..|+..+... .....+.+- +-.+|.|.+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 334466 999999987543 33444445557899999998775332211 011222222 346788888777655544
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
.... + ....++.++|+|+|.+.|.+... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 3210 1 12246778999999988753211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+..+.+++|+++ |+++|. ++..+++++. +++ .+....+.+.|.++.+++..+|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~~----~~~-------~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEEM----REK-------YNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHHH----HHH-------hCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888765 777773 3333344443 333 23344455667899999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CC-ceEeCCCCHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SG-AIRVNPWNVDAVADA 499 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~-ai~vnP~d~~~~A~a 499 (854)
.||++++||..||||++++|||+| |.|+|+|..+|..+.+ ++ +++++| |.++++++
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~---------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~ 326 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASC---------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRK 326 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHc---------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHH
Confidence 999999999999999999999999 4599999999988877 33 444544 99999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHH
Q 003042 500 MDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 543 (854)
|.+++.++.+.+....+.......++++..-++++++..+++..
T Consensus 327 l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 327 LEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99999876555433333334455669999999999988877653
No 39
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.89 E-value=9e-22 Score=229.02 Aligned_cols=310 Identities=17% Similarity=0.206 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhccC--CCeEEEEecCCCC----ChhhhhcCCCh------
Q 003042 171 AYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRFH--RVKVGFFLHSPFP----SSEIYRTLPVR------ 237 (854)
Q Consensus 171 ~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~~--~~~i~~flH~pfP----~~e~~~~lp~r------ 237 (854)
.+...++..++.+... .+| |+|++||+|-.++|.++++... ++|+.++.|...+ +.+.+..+...
T Consensus 110 r~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~ 187 (473)
T TIGR02095 110 RFAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM 187 (473)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc
Confidence 3444445444444321 345 8999999999999999988765 3899999997642 12222221111
Q ss_pred --------HH-HHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEE--ECCeEEEEEEeccccCchHHHhh
Q 003042 238 --------DE-ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQFESI 306 (854)
Q Consensus 238 --------~e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~~~~~~ 306 (854)
-. +-.++..||.|-.-++.|++..... ..|. +++ ...+..++.++|+|||.+.|.+.
T Consensus 188 ~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~ 255 (473)
T TIGR02095 188 EGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPA 255 (473)
T ss_pred hhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCC
Confidence 11 2235566777777777666654321 0000 000 01133478899999999988642
Q ss_pred hCCc-----------hHHHHHHHHHHHcC-----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 307 MSLD-----------VTGQKVKELKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 307 ~~~~-----------~~~~~~~~l~~~~~-----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
.... ........++++++ ++++|++|||+.+.||+..+++|++++.++. +.|+++|..
T Consensus 256 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 329 (473)
T TIGR02095 256 TDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG 329 (473)
T ss_pred CCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC
Confidence 1100 01122345666662 6789999999999999999999999987542 457877742
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
+ .++++++++++.+ ++. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 330 -----~--~~~~~~l~~~~~~----~~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----- 388 (473)
T TIGR02095 330 -----D--PELEEALRELAER----YPG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY----- 388 (473)
T ss_pred -----C--HHHHHHHHHHHHH----CCC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-----
Confidence 1 2345556665543 221 144444 467888889999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCC---------CceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---------GAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKH 518 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~ai~vnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~ 518 (854)
+.|+|+|..+|..+.+. .|++++|.|+++++++|.+++.+ .++.++...++.
T Consensus 389 ----------------G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 452 (473)
T TIGR02095 389 ----------------GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNA 452 (473)
T ss_pred ----------------CCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45999999999998882 37999999999999999999873 223333332222
Q ss_pred hccccccChHHHHHHHHHHHH
Q 003042 519 YKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 519 ~~~v~~~~~~~W~~~~l~~l~ 539 (854)
. .+.+++...++++++-.+
T Consensus 453 ~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 453 M--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred h--ccCCCcHHHHHHHHHHHH
Confidence 2 256899999888876554
No 40
>PRK14099 glycogen synthase; Provisional
Probab=99.89 E-value=3.1e-21 Score=223.83 Aligned_cols=297 Identities=17% Similarity=0.166 Sum_probs=193.3
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhc-cCCCeEEEEecCC-----CCChhhhhc--CCCh-------------HHHHHHhh
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSP-----FPSSEIYRT--LPVR-------------DEILKSLL 245 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~-~~~~~i~~flH~p-----fP~~e~~~~--lp~r-------------~eil~~ll 245 (854)
++| |+|++||+|--++|.+|+.+ ..++++.++.|.. ||. ..+.. +|.. .-+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 456 99999999999999999753 3467899999964 322 11111 1110 01233455
Q ss_pred cCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCC-------ch----HHH
Q 003042 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-------DV----TGQ 314 (854)
Q Consensus 246 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~-------~~----~~~ 314 (854)
.||.|---++.|++...+.- .-.|++. .+..+..++.++|+|||++.|.+.... .+ ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 66666655666655432200 0000000 001123468899999999988643210 00 011
Q ss_pred HHHHHHHHcC-----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 003042 315 KVKELKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIA 389 (854)
Q Consensus 315 ~~~~l~~~~~-----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v 389 (854)
....++++++ +..+|++|||+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 1234566652 356888999999999999999999998753 2 44777774 22 23445555555
Q ss_pred HHHhhccCCCCCccEEEEcCCCChhhHHHHH-HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCc
Q 003042 390 EEINLNFGKPGYEPIVIIKEPLSTQDKVPYY-AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS 468 (854)
Q Consensus 390 ~~In~~~~~~~~~pv~~~~~~~~~~el~aly-~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g 468 (854)
.+ ++ ..++++.|. .+++..+| +.||+||+||.+||||++.+|||+| |.
T Consensus 346 ~~----~~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~---------------------G~ 394 (485)
T PRK14099 346 QA----YP----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY---------------------GA 394 (485)
T ss_pred HH----CC----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC---------------------CC
Confidence 43 21 124455554 67888877 5799999999999999999999999 44
Q ss_pred eEEEecCccccccC-C-----------CceEeCCCCHHHHHHHHHHHh---cCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 469 VIIVSEFIGCSPSL-S-----------GAIRVNPWNVDAVADAMDSAL---QMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 469 ~lV~Se~~G~~~~l-~-----------~ai~vnP~d~~~~A~ai~~aL---~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
|+|+|..+|..+.+ + .|++|+|.|+++++++|.+++ +.++ .++...++.+ ...+++..-+++
T Consensus 395 ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~-~~~~l~~~~~--~~~fSw~~~a~~ 471 (485)
T PRK14099 395 VPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPV-AWRRLQRNGM--TTDVSWRNPAQH 471 (485)
T ss_pred CcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHH-HHHHHHHHhh--hhcCChHHHHHH
Confidence 88889999988876 2 489999999999999999854 3333 3333333222 367899999999
Q ss_pred HHHHHHHHHH
Q 003042 534 IDQDLERACR 543 (854)
Q Consensus 534 ~l~~l~~~~~ 543 (854)
+++-.+++.+
T Consensus 472 y~~lY~~l~~ 481 (485)
T PRK14099 472 YAALYRSLVA 481 (485)
T ss_pred HHHHHHHHHh
Confidence 8887776654
No 41
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.89 E-value=8.1e-22 Score=224.15 Aligned_cols=301 Identities=13% Similarity=0.120 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC--Chhh-hh-cCCCh--------
Q 003042 170 QAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP--SSEI-YR-TLPVR-------- 237 (854)
Q Consensus 170 ~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP--~~e~-~~-~lp~r-------- 237 (854)
.....+-+.......+.++| |+|+.| +.+....+|++.+|++++..++|..+= ..+. |. ..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (396)
T cd03818 69 LRGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLR 144 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHH
Confidence 33344434333333444567 899999 677777889999999999888764331 1111 11 11111
Q ss_pred HH---HHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHH
Q 003042 238 DE---ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQ 314 (854)
Q Consensus 238 ~e---il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~ 314 (854)
.. +...+-.+|.|-..+......|... + ..++.++|+|||.+.|.+... .
T Consensus 145 ~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~-------------------~---~~ki~vI~ngvd~~~f~~~~~---~-- 197 (396)
T cd03818 145 NRNALILLALAQADAGVSPTRWQRSTFPAE-------------------L---RSRISVIHDGIDTDRLRPDPQ---A-- 197 (396)
T ss_pred HhhhHhHHHHHhCCEEECCCHHHHhhCcHh-------------------h---ccceEEeCCCccccccCCCch---h--
Confidence 11 2345667788777665444433210 1 136788999999988863211 1
Q ss_pred HHHHHHHH---cCCCEEEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCh--hH-HHHHHHHHHH
Q 003042 315 KVKELKEK---FDGKIVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSG--KD-VQDLLSDTNR 387 (854)
Q Consensus 315 ~~~~l~~~---~~~~~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~--~~-~~~l~~~v~~ 387 (854)
...++.. ..++++|+++|| +.+.||+..+++|+.++.+++|+++ |+++|......+ ++ ...+++ +
T Consensus 198 -~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~ 269 (396)
T cd03818 198 -RLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---H 269 (396)
T ss_pred -hhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---H
Confidence 1111111 146789999998 9999999999999999999998876 888885321111 00 011121 2
Q ss_pred HHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCC
Q 003042 388 IAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467 (854)
Q Consensus 388 ~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~ 467 (854)
+.++++.+.+ . +.+.|.|.++.+++.++|+.||++|+||..||+|++++||||| |
T Consensus 270 ~~~~~~~~~~---~-~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~---------------------G 324 (396)
T cd03818 270 MLDELGGRLD---L-SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC---------------------G 324 (396)
T ss_pred HHHHhhcccC---c-ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC---------------------C
Confidence 2222222221 1 2455677899999999999999999999999999999999999 4
Q ss_pred ceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHH
Q 003042 468 SVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSID 535 (854)
Q Consensus 468 g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 535 (854)
.|+|+|+.+|..+.+. .|++++|.|++++|++|.+++++++ ++....++.++++.+ +++...+++++
T Consensus 325 ~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 325 CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPA-RRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 5999999998888883 4899999999999999999998764 455556666777765 88777777665
No 42
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.89 E-value=1.4e-21 Score=222.61 Aligned_cols=272 Identities=16% Similarity=0.143 Sum_probs=197.4
Q ss_pred CeEEEeCcccchHHHHHHhc-cCCCeEEEEecCCCCChhhhhc--CC-ChHHHHHHhhcCCeEeecCHHHHHHHHHHHHh
Q 003042 192 DYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPSSEIYRT--LP-VRDEILKSLLNSDLIGFHTFDYARHFLSSCSR 267 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~-~~~~~i~~flH~pfP~~e~~~~--lp-~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r 267 (854)
|+|+.|.-+.-.+..++++. ....++.+++|-+ ++++. .. .+..+-+-+-.+|.|-..+....+.+.+
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~----d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGI----DISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccc----ccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 89999988776677777763 2244667788853 22211 01 1112233344688887776644443321
Q ss_pred hhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHH
Q 003042 268 MLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLA 347 (854)
Q Consensus 268 ~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A 347 (854)
+|. ...++.++|+|||.+.|..... ....++..|++|||+.+.||+..+++|
T Consensus 192 -~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a 243 (406)
T PRK15427 192 -MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEA 243 (406)
T ss_pred -cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHH
Confidence 121 1235678999999988852110 011345679999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEE
Q 003042 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427 (854)
Q Consensus 348 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~v 427 (854)
++.+.+++|+++ |+++| +|+..++++ +++.+ .+....+.+.|.++.+|+..+|+.||+||
T Consensus 244 ~~~l~~~~~~~~----l~ivG-----~G~~~~~l~----~~~~~-------~~l~~~V~~~G~~~~~el~~~l~~aDv~v 303 (406)
T PRK15427 244 CRQLKEQGVAFR----YRILG-----IGPWERRLR----TLIEQ-------YQLEDVVEMPGFKPSHEVKAMLDDADVFL 303 (406)
T ss_pred HHHHHhhCCCEE----EEEEE-----CchhHHHHH----HHHHH-------cCCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999988888654 77777 344433444 44444 34456778889999999999999999999
Q ss_pred EccCc------cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHH
Q 003042 428 VNCVR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD 498 (854)
Q Consensus 428 v~S~~------EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 498 (854)
+||.. ||+|++.+|||+| |.|+|+|..+|+.+.+. +|++++|.|++++|+
T Consensus 304 ~pS~~~~~g~~Eg~p~~llEAma~---------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ 362 (406)
T PRK15427 304 LPSVTGADGDMEGIPVALMEAMAV---------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQ 362 (406)
T ss_pred ECCccCCCCCccCccHHHHHHHhC---------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHH
Confidence 99984 9999999999999 45999999999888883 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHH
Q 003042 499 AMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
+|.+++++++++++...++.++++ .++++...++++.+-+++
T Consensus 363 ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 363 RLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999966666666677777776 558999999888776653
No 43
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.88 E-value=2.6e-22 Score=210.05 Aligned_cols=210 Identities=19% Similarity=0.242 Sum_probs=141.4
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCC--cce
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN--SAW 664 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~--~~~ 664 (854)
|++|+||||++ +.+.+++++.++|+++ ++.|+.+++||||++..+..++..+. ..+++++||+.|+..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 7788999999999999 89999999999999999988876664 45789999999988653 344
Q ss_pred EEccccccchHHHHH-HHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEE
Q 003042 665 EICSLTRDFDWKEIA-EPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIV 743 (854)
Q Consensus 665 ~~~~~~~~~~~~~~v-~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~v 743 (854)
...+. ..|.... ......+..... .+ . ............+ . +....+.+.+... ..+.++...+
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~-~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSRLKV-QY-P-RRASLVKMRYGID-------V-DTVREIIKELGLN-LVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhhhcc-cc-c-cccceEEEeecCC-------H-HHHHHHHHhcCce-EEEecCCcEE
Confidence 43322 1222111 111000000000 00 0 0000101000001 1 1112222222221 2233556799
Q ss_pred EEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceE
Q 003042 744 EVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYY 819 (854)
Q Consensus 744 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~ 819 (854)
||+|++++||.+++++++++ |++++++++|||+.||++||+.+|. +|+||++ +..|+|+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~v 204 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYV 204 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCee
Confidence 99999999999999999999 9999999999999999999999986 5777775 5789998
Q ss_pred eC--CHhH----HHHHHHHH
Q 003042 820 LD--DTAE----VINLLEGL 833 (854)
Q Consensus 820 l~--~~~e----V~~~L~~l 833 (854)
+. +.++ |.+.|+++
T Consensus 205 t~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 205 TESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred cCCCCCCcHHHHHHHHHHhh
Confidence 85 3556 88887764
No 44
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.88 E-value=5.8e-22 Score=211.74 Aligned_cols=216 Identities=20% Similarity=0.309 Sum_probs=143.4
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECC-Ccce
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK-NSAW 664 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~-~~~~ 664 (854)
+|++||||||++ .++.+++++.++|+++ ++.|+.+++||||+...+..++..+. ..++++.||+.|...+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 7788999999999999 89999999999999999998887664 3478999999998764 3344
Q ss_pred EEccccccchHHHHHHHHHHHHhc--------cCCcceEecccce-EE----Eee------ccC---CCc-cc-------
Q 003042 665 EICSLTRDFDWKEIAEPVMKLYTE--------TTDGSFIEDKETA-IV----WHH------QHA---DPH-FG------- 714 (854)
Q Consensus 665 ~~~~~~~~~~~~~~v~~~~~~y~~--------~~~g~~ie~k~~~-l~----~~~------~~~---d~~-~~------- 714 (854)
...++.. .++++++...+ ...+.++...... +. ..+ ... ..+ ..
T Consensus 77 ~~~i~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDLD------LVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCHH------HHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 4443322 12222221111 1112222111000 00 000 000 000 00
Q ss_pred hhhHHHHHHHHHH-HhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhc
Q 003042 715 SCQAKELLDHLEN-VLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAV 793 (854)
Q Consensus 715 ~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~ 793 (854)
.....++.+.+.+ .+......+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 0112223333331 122223345677889999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHH
Q 003042 794 ADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINL 829 (854)
Q Consensus 794 ~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~ 829 (854)
+|+||++ +..|+|++.+ .++|.++
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 5677764 4678898864 4556654
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.88 E-value=8.6e-22 Score=204.82 Aligned_cols=206 Identities=17% Similarity=0.260 Sum_probs=139.0
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCcc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~~ 663 (854)
+|+|++|+||||++ .++.+++.+.++|++| +++|+.|+++|||++..+..++..++ ..+++++||+.|+..+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 48999999999999 7888999999999999 89999999999999999999886664 3368999999999865432
Q ss_pred eEEccccccchHH-HHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeE
Q 003042 664 WEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHI 742 (854)
Q Consensus 664 ~~~~~~~~~~~~~-~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~ 742 (854)
... . ....+. ...... .+....... ........+. ... .....+...+ ......+..+...
T Consensus 77 ~~~--~-~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~---~~~----~~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLA--N-MEEEWFLDEEKKK--RFPRDRLSN--EYPRASLVIM---REG----KDVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEe--c-ccchhhHHHhhhh--hhhhhhccc--ccceeEEEEe---cCC----ccHHHHHHHH----HhCCeEEEecCce
Confidence 111 1 111111 000000 010000000 0000001110 000 0112222222 2233444455678
Q ss_pred EEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----Ccccce
Q 003042 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKY 818 (854)
Q Consensus 743 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y 818 (854)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.+|. +|+||+. +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999986 5777765 578899
Q ss_pred EeC--CHhHHHHH
Q 003042 819 YLD--DTAEVINL 829 (854)
Q Consensus 819 ~l~--~~~eV~~~ 829 (854)
++. +.++|.++
T Consensus 202 v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 202 VTSNPYGEGVVEV 214 (215)
T ss_pred EcCCCCCchhhhh
Confidence 885 34556654
No 46
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.88 E-value=4.9e-21 Score=222.29 Aligned_cols=283 Identities=14% Similarity=0.186 Sum_probs=198.2
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh----HHHHHHh-hcCCeEeecCHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR----DEILKSL-LNSDLIGFHTFDYA 258 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r----~eil~~l-l~~dligf~t~~~~ 258 (854)
++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|...-....++. ..+.+.+ -.+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 344566 8999998777666666544455788999999766532110011110 0112222 35788888777666
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc----CCCEEEEEecC
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF----DGKIVILGVDD 334 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~iil~VdR 334 (854)
+.+... +. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||
T Consensus 218 ~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHc-----CC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 655431 10 112367789999999888532211 1223332 36789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
+.+.||+..+++|++++ |++ .|+++| +|+..++ +++++.. . +| .|.|.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~----~l~ivG-----~G~~~~~----l~~~~~~-------~---~V-~f~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGA----RLAFVG-----DGPYREE----LEKMFAG-------T---PT-VFTGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCc----EEEEEe-----CChHHHH----HHHHhcc-------C---Ce-EEeccCCHH
Confidence 99999999999888654 554 488777 3444333 3333321 1 24 466789999
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC------CceEe
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------GAIRV 488 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~ai~v 488 (854)
|+..+|+.||+||+||..||||++++|||+| |.|+|+|..+|+.+.+. +|+++
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~---------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv 382 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMAS---------------------GVPVVAARAGGIPDIIPPDQEGKTGFLY 382 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHc---------------------CCCEEEcCCCCcHhhhhcCCCCCceEEe
Confidence 9999999999999999999999999999999 45999999999887763 28999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH-HHHHHHh
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD-LERACRD 544 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~ 544 (854)
+|.|++++|++|.++++.+ +.++...+..++++.++++...++++++. ..++...
T Consensus 383 ~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 383 TPGDVDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred CCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999855 45555666777788889999999999984 5555444
No 47
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.87 E-value=2e-20 Score=210.73 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=157.9
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
.++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|++
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 45678999999987753211 1 111112222 4678999999999999999999999999999987666788998
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
+|. |+..+++++ .+.+ .+....+++.|. .+|+..+|+.||++|+||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGACEQ----MVRA-------AGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHHHH----HHHH-------cCCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 333333433 3333 334456777764 678999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI- 522 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v- 522 (854)
|.|+|+|+.+|..+.+. .|++++|.|++++|++|.++++.++ .+....++.++++
T Consensus 296 --------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~-~~~~~~~~a~~~~~ 354 (374)
T TIGR03088 296 --------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPA-ARRAHGAAGRARAE 354 (374)
T ss_pred --------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHH
Confidence 45999999999888883 3899999999999999999988654 4455555666666
Q ss_pred cccChHHHHHHHHHHHHH
Q 003042 523 SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 523 ~~~~~~~W~~~~l~~l~~ 540 (854)
..+++...++++.+...+
T Consensus 355 ~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 355 QQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 579999998888776654
No 48
>PTZ00174 phosphomannomutase; Provisional
Probab=99.87 E-value=1.2e-20 Score=200.21 Aligned_cols=199 Identities=17% Similarity=0.208 Sum_probs=129.4
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--cc-cceeecCcEEEEE
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTRW 658 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~-l~liaenG~~I~~ 658 (854)
.|++|+|++||||||++ +++.+++.++++|+++ +++|+.|+|||||++..+.+.++.. .. ..+++.||+.|+.
T Consensus 2 ~~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 57899999999999999 8899999999999999 8999999999999999998887532 12 2568999999997
Q ss_pred CCCcceEEcccc-ccch-HHHHHHHHHH----HHhccCCcceEecccceEEEeec-cCC-----Ccc---c--hhhHHHH
Q 003042 659 SKNSAWEICSLT-RDFD-WKEIAEPVMK----LYTETTDGSFIEDKETAIVWHHQ-HAD-----PHF---G--SCQAKEL 721 (854)
Q Consensus 659 ~~~~~~~~~~~~-~~~~-~~~~v~~~~~----~y~~~~~g~~ie~k~~~l~~~~~-~~d-----~~~---~--~~~~~el 721 (854)
.+...+...+.. .+.+ ..+.+....+ .......+.+.+.........+. ... ..+ . .....++
T Consensus 78 ~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
T PTZ00174 78 DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKF 157 (247)
T ss_pred CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHH
Confidence 655444443321 1112 1222221111 11111223443322111111110 000 000 0 0112345
Q ss_pred HHHHHHHhcCCCEEEEE-cCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhh
Q 003042 722 LDHLENVLANEPVVVKR-GQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQ 791 (854)
Q Consensus 722 ~~~l~~~l~~~~~~v~~-g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~ 791 (854)
.+.+.+.+.+....... +..++||+|+|+|||.|++.|+++ ++++++||| +.||++||+.++.
T Consensus 158 ~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 158 IQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 55555555433333333 457999999999999999999986 489999999 8999999998765
No 49
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.87 E-value=3.1e-20 Score=209.91 Aligned_cols=285 Identities=14% Similarity=0.101 Sum_probs=198.2
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhh-----hcCCChHHH-HHHhhcCCeEeecCHHHHHHHHHH
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY-----RTLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~-----~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
-|+|++|++...+.+.++ ++..++|+.+.+|..+|..... ........+ ...+..+|.|-..+....+.+.+.
T Consensus 84 ~divh~~~~~~~~~~~~~-~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLA-KKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHH-HHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 389999998776555544 4456789999999876532110 000111111 223456788888777666655431
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi 341 (854)
. -+ -...++.++|+|+|...+.+. . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 112467789999998877521 1 12233443 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|++++. +++ .|+.+|.. ++..++.+++++.+...+... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~----~l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDV----QVVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcC----cEEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999998873 333 36655532 122344555555555543222 23777888899999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCH-----
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV----- 493 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~----- 493 (854)
.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|.
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~---------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~ 338 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC---------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGF 338 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc---------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccch
Confidence 999999999999999999999999 45999999999888773 3899999998
Q ss_pred -HHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHHH
Q 003042 494 -DAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 494 -~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 541 (854)
++++++|.++++.++ +++...+..++++ .++++..+++++++.++++
T Consensus 339 ~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 339 QAELAKAINILLADPE-LAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999988654 4444444555544 6699999999998877653
No 50
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.86 E-value=1.9e-20 Score=218.20 Aligned_cols=310 Identities=18% Similarity=0.189 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhcc-----CCCeEEEEecCCCCC----hhhhhc--CCC-
Q 003042 170 QAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRF-----HRVKVGFFLHSPFPS----SEIYRT--LPV- 236 (854)
Q Consensus 170 ~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~-----~~~~i~~flH~pfP~----~e~~~~--lp~- 236 (854)
..|...++...+.+... .+| |+|++||+|-.++|.++++.. .++|+.|+.|.+.+. ...+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444555555544432 345 999999999999999998774 578999999987532 111111 111
Q ss_pred -------------hHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEE--ECCeEEEEEEeccccCch
Q 003042 237 -------------RDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMG 301 (854)
Q Consensus 237 -------------r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~ 301 (854)
..-+-.++..||.|-.-+..|++..++.- .|. +++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCc
Confidence 11223345667777777776666543210 000 000 012235788999999999
Q ss_pred HHHhhhCCc-----------hHHHHHHHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003042 302 QFESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (854)
Q Consensus 302 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 365 (854)
.|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.++. +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 0112234456665 46789999999999999999999999987653 4477
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
++|.. + .++.+++.+++.+. ...++++.+ .+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 330 i~G~g---~----~~~~~~~~~~~~~~--------~~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG---D----PEYEEALRELAARY--------PGRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC---C----HHHHHHHHHHHHhC--------CCcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77742 1 13444555554442 113555655 45777789999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHH
Q 003042 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILR 514 (854)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m~--~~er~~r 514 (854)
|.|+|+|..+|..+.+ + .|+++.|.|+++++++|.+++.+. ++++...
T Consensus 394 ---------------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~ 452 (476)
T cd03791 394 ---------------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKL 452 (476)
T ss_pred ---------------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 4599999999999888 3 589999999999999999998643 2333333
Q ss_pred HHHHhccccccChHHHHHHHHHHH
Q 003042 515 HEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 515 ~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
.++..+ ..+++...++++++-.
T Consensus 453 ~~~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 453 QRNAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHHHhc--cCCChHHHHHHHHHHH
Confidence 333222 3578888888776644
No 51
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.86 E-value=4e-21 Score=204.38 Aligned_cols=221 Identities=17% Similarity=0.281 Sum_probs=145.4
Q ss_pred eEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccc--eeecCcEEEEECCCc
Q 003042 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLG--LSAEHGYFTRWSKNS 662 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~--liaenG~~I~~~~~~ 662 (854)
.+|++||||||+++...+...++++.++++++ .++|+.+++||||+...+..+...++ .-+ ++++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 58999999999974334577889999999999 89999999999999999998865432 123 788999999876521
Q ss_pred ----ceEEccccccchHH-HHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC---CE
Q 003042 663 ----AWEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE---PV 734 (854)
Q Consensus 663 ----~~~~~~~~~~~~~~-~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~---~~ 734 (854)
.|.... ...|. +.+..+...|....+......+...+.+..... ...+....+.+.+... ..
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCEE
Confidence 111000 01122 112222333333223322233333444432211 1223344444444322 24
Q ss_pred EEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-
Q 003042 735 VVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP- 813 (854)
Q Consensus 735 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~- 813 (854)
.+.++..++||+|++++||.|++++++++ |++++++++|||+.||++||+.++. .+|+|+++.
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~~ 214 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQE 214 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCHH
Confidence 45678899999999999999999999999 9999999999999999999998542 356777652
Q ss_pred ---cc-------cceEeCC--HhHHHHHHHHH
Q 003042 814 ---SM-------AKYYLDD--TAEVINLLEGL 833 (854)
Q Consensus 814 ---s~-------A~y~l~~--~~eV~~~L~~l 833 (854)
.. +.|+.+. ++++++.|+++
T Consensus 215 ~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 215 ELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 1255543 67788877764
No 52
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.86 E-value=3.7e-20 Score=209.39 Aligned_cols=286 Identities=18% Similarity=0.141 Sum_probs=199.9
Q ss_pred CCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhc-----CC-ChHHH-HHHhhcCCeEeecCHHHHHH
Q 003042 188 NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-----LP-VRDEI-LKSLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 188 ~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~-----lp-~r~ei-l~~ll~~dligf~t~~~~~~ 260 (854)
+| |+|.+|++....++..+.+. .++++.+..|........... .+ .+..+ ...+..+|.|.+.+......
T Consensus 101 ~~--Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (398)
T cd03800 101 RP--DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398)
T ss_pred Cc--cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHH
Confidence 55 99999998777766666544 478899999975432111100 00 11111 22345799999988776665
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCC
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KG 340 (854)
+... . .....++.++|+|+|...|...... ......+ ....++.+|+++||+++.||
T Consensus 178 ~~~~----~---------------~~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~-~~~~~~~~i~~~gr~~~~k~ 234 (398)
T cd03800 178 LYSL----Y---------------GAYPRRIRVVPPGVDLERFTPYGRA---EARRARL-LRDPDKPRILAVGRLDPRKG 234 (398)
T ss_pred HHHH----c---------------cccccccEEECCCCCccceecccch---hhHHHhh-ccCCCCcEEEEEcccccccC
Confidence 5431 0 0112237789999998877532211 1111111 11146789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|+..+.+++|+++ |+++|....... .....+++.++++ .+..+-+.+.+.++.+++..+|
T Consensus 235 ~~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 235 IDTLIRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELARE-------LGVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHh-------cCCCceEEEeccCCHHHHHHHH
Confidence 9999999999988877654 888886432221 2222334444444 2333456677899999999999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|+++++
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~---------------------G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~ 359 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMAC---------------------GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALA 359 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhc---------------------CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHH
Confidence 9999999999999999999999999 45999999999888882 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (854)
++|.+++++++ +++...+..++++ +++++..++++++
T Consensus 360 ~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 360 AALRRLLTDPA-LRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 99999998754 4444555556666 7799999888775
No 53
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.86 E-value=6.5e-21 Score=205.59 Aligned_cols=227 Identities=16% Similarity=0.162 Sum_probs=146.7
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~ 661 (854)
+++|+|++|+||||++ +++.+++.+.++|++| ++.|+.+++||||+...+...+..+. ..++++.||++|+.+++
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 6799999999999999 6778889999999999 89999999999999999988887653 23689999999987543
Q ss_pred c-------------ceEEccccccchHHHHHHHHHHHHhccCCcce-Eecc----c----ceEEE---e-e--ccCCCcc
Q 003042 662 S-------------AWEICSLTRDFDWKEIAEPVMKLYTETTDGSF-IEDK----E----TAIVW---H-H--QHADPHF 713 (854)
Q Consensus 662 ~-------------~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~-ie~k----~----~~l~~---~-~--~~~d~~~ 713 (854)
. .|....... .+.+.+++..+.......+ .... + ..+.. . . ......+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELGPP----YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEEcCCC----HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 121111111 1122222221111000000 0000 0 00000 0 0 0000000
Q ss_pred chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCC-CeEEEEeCCcccHHHHHHhhhh
Q 003042 714 GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSP-DFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 714 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
......+..+.+.+.+......+..+..++||+|.+ +||.+++++++++ |+++ +++++|||+.||++||+.+|.
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~- 228 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI- 228 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe-
Confidence 000012333444444443345555667899999999 9999999999999 9999 999999999999999999986
Q ss_pred cCCCCCCCCccEEEEEecCCC--------ccc-ceEe--C--CHhHHHHHHHHHHh
Q 003042 793 VADPSVPGIAEVFACTVGQKP--------SMA-KYYL--D--DTAEVINLLEGLAT 835 (854)
Q Consensus 793 ~~~~~~~~~~~~~aV~vG~~~--------s~A-~y~l--~--~~~eV~~~L~~l~~ 835 (854)
+|+||++. ..| +++. + +.++|++.|+++..
T Consensus 229 -------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 229 -------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred -------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 56777642 333 4655 3 47899999998753
No 54
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.86 E-value=9.6e-20 Score=216.19 Aligned_cols=339 Identities=11% Similarity=0.094 Sum_probs=204.2
Q ss_pred hhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCC----CChhh-hhcCC-----
Q 003042 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSEI-YRTLP----- 235 (854)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~e~-~~~lp----- 235 (854)
.+.|..-..++...++.+.......-|+|+.|...=-++...|+++. +++..+..|..= +.+.. +....
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 34577777777777776654433112899998655445666666555 688888888541 11111 11111
Q ss_pred -Ch-HHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccc-cccCceeeEEEC--CeEEEEEEeccccCchHHHhhhCCc
Q 003042 236 -VR-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNY-ESKRGYIGLDYF--GRTVSIKILPVGIHMGQFESIMSLD 310 (854)
Q Consensus 236 -~r-~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~-~~~~~~~~i~~~--gr~~~i~v~p~GId~~~~~~~~~~~ 310 (854)
.+ +.=+..|-.||.|--.|+.-+..-...+.. .+... -...+...+..+ ....++.++|+|+|+..|.+.....
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~ 518 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKE 518 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchh
Confidence 11 001255667898888775322110000000 00000 000011111111 1123778999999999886532211
Q ss_pred hHH-HHH----------HHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC-
Q 003042 311 VTG-QKV----------KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS- 373 (854)
Q Consensus 311 ~~~-~~~----------~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~- 373 (854)
... ... ...++.+ .++++|++|||+++.||+..+++||.++.+.. ..+.||+||.+...
T Consensus 519 ~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 519 KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAK 594 (784)
T ss_pred hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccc
Confidence 100 000 0112222 47889999999999999999999998764433 34568888864321
Q ss_pred --ChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCC-CChhhHHHHHH----hCcEEEEccCccCCCCcceeeeeee
Q 003042 374 --SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP-LSTQDKVPYYA----IAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 374 --~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~-~~~~el~aly~----~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
...+..+..+++.+++++.+ ....+.+.|. .+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~g-------L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc- 666 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQ-------LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC- 666 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhC-------CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc-
Confidence 11122233445566665532 2223344443 45566666665 347999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILRHEKHYK 520 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~ 520 (854)
|.|+|+|..+|+.+.+. .|++|+|.|++++|++|.++++ ..++.++...++.++
T Consensus 667 --------------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 667 --------------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred --------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 56999999999999883 4899999999999999999873 234445555555555
Q ss_pred cc-cccChHHHHHHHHHHH
Q 003042 521 YI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 521 ~v-~~~~~~~W~~~~l~~l 538 (854)
++ +++++...++++++.+
T Consensus 727 rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 727 RIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHhCCHHHHHHHHHHHH
Confidence 55 6689999999887654
No 55
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.86 E-value=4.8e-20 Score=205.12 Aligned_cols=281 Identities=17% Similarity=0.202 Sum_probs=197.4
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh-hcCCeEeecCHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARH 260 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~ 260 (854)
++++..+| |+|++|.+|..++..+++...+..++....|...+...+ +..+.+-. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34566677 899999999888888887776777888888854332111 11111111 1244444445544444
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccc
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~ 337 (854)
|+... .-...++.++|+|+|...|.... .....+++++ +++++++++||+.+
T Consensus 145 ~~~~~-------------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK-------------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc-------------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 44310 01123677899999988764211 1223355554 46789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|+.++.+++|+++ |+++|. ++..+++++. +.+. +..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~~----~~~~-------~~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLERL----IKAL-------GLSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHHH----HHhc-------CCCCcEEEecc--cccHH
Confidence 9999999999999998888765 877773 3333334433 3332 22334445554 46899
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAV 496 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~ 496 (854)
.+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+ +.|+.++|.|++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~---------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~ 316 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC---------------------ELPVVATDAGGVREVVGDSGLIVPISDPEAL 316 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc---------------------CCCEEEecCCChhhEecCCceEeCCCCHHHH
Confidence 9999999999999999999999999999 4599999998888877 45899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 497 ADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
+++|.+++.+++..+..+.+......+.+++..+++++++-+
T Consensus 317 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 317 ANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 999999998887777666666344456799999999887654
No 56
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.86 E-value=2.9e-20 Score=212.66 Aligned_cols=272 Identities=15% Similarity=0.155 Sum_probs=183.6
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC--ChhhhhcC-------------CChH--HHHH-------
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP--SSEIYRTL-------------PVRD--EILK------- 242 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP--~~e~~~~l-------------p~r~--eil~------- 242 (854)
++| |+|..| +-+..+-.+.+.++++|+++++| || +.+.+..+ ..+. .+++
T Consensus 106 ~~p--Dv~i~~--~g~~~~~~~~~~~~~~~~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~ 179 (419)
T cd03806 106 LVP--DIFIDT--MGYPFTYPLVRLLGGCPVGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLF 179 (419)
T ss_pred cCC--CEEEEc--CCcccHHHHHHHhcCCeEEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHH
Confidence 467 754444 32333334556677899999999 66 33444221 1111 1211
Q ss_pred ------HhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHH
Q 003042 243 ------SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKV 316 (854)
Q Consensus 243 ------~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~ 316 (854)
.+-.||.|-..+.....++.+. . +...++.++++|+|.+.|.... .
T Consensus 180 ~~~~~~~~~~aD~ii~~S~~~~~~~~~~----~----------------~~~~~~~vi~~gvd~~~~~~~~---~----- 231 (419)
T cd03806 180 AFLYGLAGSFADVVMVNSTWTRNHIRSL----W----------------KRNTKPSIVYPPCDVEELLKLP---L----- 231 (419)
T ss_pred HHHHHHHhhcCCEEEECCHHHHHHHHHH----h----------------CcCCCcEEEcCCCCHHHhcccc---c-----
Confidence 2335677777665444444321 0 1112567889999988775221 0
Q ss_pred HHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhc
Q 003042 317 KELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLN 395 (854)
Q Consensus 317 ~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~ 395 (854)
....++++|+++||+.+.||+...|+||.++.+++|+.. .++.|+++|..... +..++.+++++++.+.
T Consensus 232 ----~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~---~~~~~~~~L~~~~~~l--- 301 (419)
T cd03806 232 ----DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE---DDEKRVEDLKLLAKEL--- 301 (419)
T ss_pred ----ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc---ccHHHHHHHHHHHHHh---
Confidence 012356799999999999999999999999999888631 24668888853211 1123455566666553
Q ss_pred cCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC
Q 003042 396 FGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475 (854)
Q Consensus 396 ~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 475 (854)
+....+.|.+.++.+++..+|+.||++|.||..||||++++||||| |.|+|+|..
T Consensus 302 ----~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~---------------------G~pvIa~~~ 356 (419)
T cd03806 302 ----GLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA---------------------GLIPLAHAS 356 (419)
T ss_pred ----CCCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc---------------------CCcEEEEcC
Confidence 3444566777899999999999999999999999999999999999 458999988
Q ss_pred ccccccC-C------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHH
Q 003042 476 IGCSPSL-S------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (854)
Q Consensus 476 ~G~~~~l-~------~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 529 (854)
+|..+++ . .|++++ |++++|++|.+++++++++++.+.++.++...+++...
T Consensus 357 ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 357 GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 8865443 3 378874 99999999999999998777665555555555566544
No 57
>PLN00142 sucrose synthase
Probab=99.86 E-value=6e-20 Score=217.84 Aligned_cols=333 Identities=14% Similarity=0.154 Sum_probs=200.3
Q ss_pred hhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCC-----------CCCh-hhhhc
Q 003042 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSP-----------FPSS-EIYRT 233 (854)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~p-----------fP~~-e~~~~ 233 (854)
.+.|..-.+++...++.+....+..-|+|+-|...=-++...|++++ +++..++.|.- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777777655443112999999443335555666555 79999999932 2111 11111
Q ss_pred -CCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccC-----c----eeeEEECCeEEEEEEeccccCchHH
Q 003042 234 -LPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKR-----G----YIGLDYFGRTVSIKILPVGIHMGQF 303 (854)
Q Consensus 234 -lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~-----~----~~~i~~~gr~~~i~v~p~GId~~~~ 303 (854)
+-...|.+ .|-.||.|--.|+.-....-. ++ + .|.+-. + ..+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 00111111 444566665444322210000 00 0 010000 0 0011111 1277889999999988
Q ss_pred HhhhCCch--------HHHHH---HHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003042 304 ESIMSLDV--------TGQKV---KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (854)
Q Consensus 304 ~~~~~~~~--------~~~~~---~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 367 (854)
.+...... ..... ...++.+ .++++|++|||+++.||+..+++||.++.+..++ +.|+++
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEE
Confidence 64211000 00000 0011111 3577999999999999999999999988666554 458888
Q ss_pred ecCCC-CChhHH--HHHHHHHHHHHHHHhhccCCCCCccEEEEcC---CCChhhHHHHHH-hCcEEEEccCccCCCCcce
Q 003042 368 TNPAR-SSGKDV--QDLLSDTNRIAEEINLNFGKPGYEPIVIIKE---PLSTQDKVPYYA-IAECCVVNCVRDGMNLVPY 440 (854)
Q Consensus 368 ~~p~r-~~~~~~--~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~---~~~~~el~aly~-~ADv~vv~S~~EG~~Lv~~ 440 (854)
|.+.. ...++. .+..+++.+++++.+-. ..|.++.. ..+.++++.+|+ ++|+||+||.+||||+|++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~------~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK------GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC------CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 86411 111111 11223455555553211 12444432 345578888777 5799999999999999999
Q ss_pred eeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHH
Q 003042 441 KYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILR 514 (854)
Q Consensus 441 Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~er~~r 514 (854)
||||| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.+++. ..++.++..
T Consensus 685 EAMA~---------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~m 743 (815)
T PLN00142 685 EAMTC---------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKI 743 (815)
T ss_pred HHHHc---------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 99999 45999999999998883 3899999999999999988753 344555555
Q ss_pred HHHHhccc-cccChHHHHHHHHHHH
Q 003042 515 HEKHYKYI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 515 ~~~~~~~v-~~~~~~~W~~~~l~~l 538 (854)
.++.++.+ +++++...++++++-.
T Consensus 744 g~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 744 SDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 56656665 6799999999887754
No 58
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.86 E-value=9.8e-21 Score=202.29 Aligned_cols=220 Identities=16% Similarity=0.144 Sum_probs=141.2
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCcc--
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA-- 663 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~~-- 663 (854)
+|++|+||||++ ..+.+.+.++++|+++ ++.|+.|++||||+...+..++..+. ..+++++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999999 5653444699999999 89999999999999999999887663 3478999999998865432
Q ss_pred ---eEEccccccchHHHHHHHHHHHHhccCCcceE--ec------cc-ceEEE------eeccCCCccchhhHHHHHHHH
Q 003042 664 ---WEICSLTRDFDWKEIAEPVMKLYTETTDGSFI--ED------KE-TAIVW------HHQHADPHFGSCQAKELLDHL 725 (854)
Q Consensus 664 ---~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~i--e~------k~-~~l~~------~~~~~d~~~~~~~~~el~~~l 725 (854)
|.... ..++ +.+.++++.+....+..+. .. .. ..+.. .......-+ .. ..+....+
T Consensus 77 ~~~~~~~~---~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIAL---GIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI-LW-SEERRERF 150 (256)
T ss_pred CCeEEEEc---CCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce-ec-ChHHHHHH
Confidence 22111 1111 2233333322111000000 00 00 00000 000000000 00 12233344
Q ss_pred HHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCC--CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCcc
Q 003042 726 ENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKS--PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAE 803 (854)
Q Consensus 726 ~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~--~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~ 803 (854)
.+.+......+..+..++||.|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~------------ 215 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL------------ 215 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE------------
Confidence 44443333444455679999999999999999999999 998 9999999999999999999986
Q ss_pred EEEEEecCCC-------cc--cc-eEeC--CHhHHHHHHHHH
Q 003042 804 VFACTVGQKP-------SM--AK-YYLD--DTAEVINLLEGL 833 (854)
Q Consensus 804 ~~aV~vG~~~-------s~--A~-y~l~--~~~eV~~~L~~l 833 (854)
+|+||++. .. |. |++. +.++|.+.|+++
T Consensus 216 --~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 --AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred --EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 56676652 22 34 7763 578899999876
No 59
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.86 E-value=2.8e-20 Score=216.37 Aligned_cols=275 Identities=14% Similarity=0.100 Sum_probs=190.9
Q ss_pred CCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh---hhhhc---CCChHH--------HHH-HhhcCCeEeecC
Q 003042 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRT---LPVRDE--------ILK-SLLNSDLIGFHT 254 (854)
Q Consensus 190 ~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~---e~~~~---lp~r~e--------il~-~ll~~dligf~t 254 (854)
+-|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.... +.+ .+-.||.|...+
T Consensus 173 ~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~s 252 (475)
T cd03813 173 KADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTLY 252 (475)
T ss_pred CCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEecC
Confidence 459999998776666776666666899999999765521 22211 000011 111 122455554443
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecC
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDD 334 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdR 334 (854)
.... ..+. .++....++.++|+|||.+.|..... . ....++++|+++||
T Consensus 253 ~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~-----~------~~~~~~~~i~~vGr 301 (475)
T cd03813 253 EGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPARR-----A------RPEKEPPVVGLIGR 301 (475)
T ss_pred HHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc-----c------ccCCCCcEEEEEec
Confidence 3222 1111 11222346788999999988853211 0 11246789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
+.+.||+..+++|+..+.++.|+++ |+++|... +..++.+++++++++.+ ..+.+.|.| .+
T Consensus 302 l~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~li~~l~-------l~~~V~f~G---~~ 362 (475)
T cd03813 302 VVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRELVESLG-------LEDNVKFTG---FQ 362 (475)
T ss_pred cccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHHHHHHhC-------CCCeEEEcC---Cc
Confidence 9999999999999999998888765 77777422 12345666777776643 333455555 67
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--------Cc
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------GA 485 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~a 485 (854)
++..+|+.||++|+||..|||+++++|||+| |.|+|+|+.+|+.+.+ + .|
T Consensus 363 ~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~---------------------G~PVVatd~g~~~elv~~~~~~~~g~~G 421 (475)
T cd03813 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAA---------------------GIPVVATDVGSCRELIEGADDEALGPAG 421 (475)
T ss_pred cHHHHHHhCCEEEeCchhhcCChHHHHHHHc---------------------CCCEEECCCCChHHHhcCCcccccCCce
Confidence 8999999999999999999999999999999 4599999999988877 3 48
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHHH
Q 003042 486 IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQ 536 (854)
Q Consensus 486 i~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 536 (854)
++++|.|++++|++|.++++.++ .++...+..++++.+ +++...++++.+
T Consensus 422 ~lv~~~d~~~la~ai~~ll~~~~-~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 422 EVVPPADPEALARAILRLLKDPE-LRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EEECCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999998654 455555566666655 577777776654
No 60
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.85 E-value=7.6e-20 Score=204.77 Aligned_cols=274 Identities=16% Similarity=0.121 Sum_probs=191.0
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCC----CChhhhhcCCChHHHHHH-hhcCCeEeecCHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDY 257 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~e~~~~lp~r~eil~~-ll~~dligf~t~~~ 257 (854)
+++..+| |+|++|+.+..+....+.+ ..++|+.+.+|.-. +.............+.+. +-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4566677 8999997764444433333 34688998888422 111111100011222222 34578888877655
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~ 337 (854)
.+.+.+. | ....++.++|+|+|.+.+.... ...++++++++||+.+
T Consensus 154 ~~~~~~~-----~---------------~~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----G---------------FPPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----C---------------CCHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5544421 1 1123567899999988764210 0134668999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++.+ .++.+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~-------~~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARA-------LGLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHH-------cCCCCeEEECCCCCHHHHH
Confidence 9999999999999998888754 887773 3332 334444443 2333456677889999999
Q ss_pred HHHHhCcEEEEccC------ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---CCceEe
Q 003042 418 PYYAIAECCVVNCV------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SGAIRV 488 (854)
Q Consensus 418 aly~~ADv~vv~S~------~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~v 488 (854)
.+|+.||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+ ..|+++
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~---------------------G~PvI~s~~~~~~e~i~~~~~g~~~ 318 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS---------------------GVPVVATRHGGIPEAVEDGETGLLV 318 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc---------------------CCCEEEeCCCCchhheecCCeeEEE
Confidence 99999999999997 59999999999999 4599999999988877 248999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHH
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (854)
+|.|+++++++|.++++.++ .+....++.++++ ..+++..+++++.
T Consensus 319 ~~~d~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 319 PEGDVAALAAALGRLLADPD-LRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 99999999999999988654 4445555566666 5689998888765
No 61
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.84 E-value=1.4e-19 Score=201.53 Aligned_cols=267 Identities=15% Similarity=0.108 Sum_probs=182.1
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHH-HhhcCCeEeecCHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~~~~F 261 (854)
+++..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+.+ .+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3445566 899999998777777776666555667788877654433322211101111 1234666666555444433
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccccC
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFK 339 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~~K 339 (854)
... ....++.++|+|+|...+... +..... .++.. .++.+|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~---~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK---RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH---HHHcCCCCCCEEEEEEecccccc
Confidence 210 112367889999999877432 111111 11212 4778999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHH
Q 003042 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (854)
Q Consensus 340 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~al 419 (854)
|+..+++|+..+.+++|+++ ++++|. ++..+.+++.++ + .+..+.+.+.|. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----E-------LGLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----h-------cCCCCcEEEecc--cCCHHHH
Confidence 99999999999999998765 887773 343344444333 2 233344555555 6789999
Q ss_pred HHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC--CceEeCCCCHHHHH
Q 003042 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVA 497 (854)
Q Consensus 420 y~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A 497 (854)
|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. ++++..+.+++++|
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~---------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a 322 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQAS---------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWA 322 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHh---------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHH
Confidence 99999999999999999999999999 46999999999888884 35566666789999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcc
Q 003042 498 DAMDSALQMENQEKILRHEKHYKY 521 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~ 521 (854)
++|.++++.++.++..+..+..+.
T Consensus 323 ~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 323 EEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHHHHHhCcchhhhhhhhhhccc
Confidence 999999999987766554444433
No 62
>PLN02949 transferase, transferring glycosyl groups
Probab=99.84 E-value=2.7e-19 Score=205.79 Aligned_cols=314 Identities=16% Similarity=0.148 Sum_probs=207.3
Q ss_pred cccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCccc-chHHHHHHhccCCCeEEE
Q 003042 141 FCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHL-MVLPSFLRKRFHRVKVGF 219 (854)
Q Consensus 141 f~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl-~llp~~lr~~~~~~~i~~ 219 (854)
+-..-.||-||-.. ..-+..|-++..+.+ +.| .|||----. ..+| ++| +...||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~p---~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FTP---LYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cCC---CEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 34556688877663 223567777766654 233 488852211 2223 344 44789999
Q ss_pred EecCCCCChhhhhcCCChH---------------HHHH-------------HhhcCCeEeecCHHHHHHHHHHHHhhhCc
Q 003042 220 FLHSPFPSSEIYRTLPVRD---------------EILK-------------SLLNSDLIGFHTFDYARHFLSSCSRMLGL 271 (854)
Q Consensus 220 flH~pfP~~e~~~~lp~r~---------------eil~-------------~ll~~dligf~t~~~~~~Fl~~~~r~lg~ 271 (854)
.+|-|-=+.+....+-.++ ..++ ..-.+|.|-..+....+++.+. .
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----W-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----c--
Confidence 9994433443332210000 0111 1134677766655444444321 1
Q ss_pred cccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHH
Q 003042 272 NYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351 (854)
Q Consensus 272 ~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~l 351 (854)
+...++.++++|+|...+... +. +...++++++++||+.+.||+..+|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111246778889998766311 10 0113457899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccC
Q 003042 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV 431 (854)
Q Consensus 352 l~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~ 431 (854)
+++.++-..++.|+++|... .++..++.+++++++++ .+....+.|.+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~-------l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKE-------LGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHH-------cCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87554222245588888642 11222344555555555 333444556678999999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C----C--ceEeCCCCHHHHHHHHHHHh
Q 003042 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S----G--AIRVNPWNVDAVADAMDSAL 504 (854)
Q Consensus 432 ~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~--ai~vnP~d~~~~A~ai~~aL 504 (854)
.||||++++|||+| |.|+|++..+|..+++ . + |++++ |++++|++|.+++
T Consensus 364 ~E~FGivvlEAMA~---------------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll 420 (463)
T PLN02949 364 DEHFGISVVEYMAA---------------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVL 420 (463)
T ss_pred cCCCChHHHHHHHc---------------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHH
Confidence 99999999999999 4589999988875433 2 2 67764 8999999999999
Q ss_pred cCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHH
Q 003042 505 QMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (854)
Q Consensus 505 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 542 (854)
++++++++...++.++.+.+++....++++++.+....
T Consensus 421 ~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 421 RMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred hCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 98877777777777788888999999999988877654
No 63
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=4.1e-19 Score=199.19 Aligned_cols=287 Identities=14% Similarity=0.121 Sum_probs=194.8
Q ss_pred HHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccC---CCeEEEEecCCCCChhhhhcCCChHH-HHHHhhcCCeEe
Q 003042 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFH---RVKVGFFLHSPFPSSEIYRTLPVRDE-ILKSLLNSDLIG 251 (854)
Q Consensus 176 N~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~---~~~i~~flH~pfP~~e~~~~lp~r~e-il~~ll~~dlig 251 (854)
++.+.+.+ +..+| |+|++|.+....++.++..+.. ++++.+.+|-.-. .....-+.... +...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEE
Confidence 34444444 45577 8999998776566666654332 6788888884211 01111122222 233456789999
Q ss_pred ecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEE
Q 003042 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIV 328 (854)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~i 328 (854)
..+......+...+ +...++.++|+|+|...+... .. ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK-----PD---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC-----ch---HHHHHhcCCCCCCeE
Confidence 98887766654311 111256789999998766421 11 1223333 47889
Q ss_pred EEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEc
Q 003042 329 ILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408 (854)
Q Consensus 329 il~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~ 408 (854)
++++||+.+.||+..+++|++++.++ +++ .|+.+|. +++...+++. +.+ .+..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~~~~~----~~~-------~~~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGD-----GPERSPAERL----ARE-------LGLQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcC-----CcCHHHHHHH----HHH-------cCCCceEEEe
Confidence 99999999999999999999988655 333 3777763 2333334333 333 2223334444
Q ss_pred CCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---Cc
Q 003042 409 EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GA 485 (854)
Q Consensus 409 ~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 485 (854)
+. .+++..+|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. .|
T Consensus 259 g~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~---------------------g~PvI~s~~~~~~e~i~~~~~G 315 (371)
T cd04962 259 GK--QDHVEELLSIADLFLLPSEKESFGLAALEAMAC---------------------GVPVVASNAGGIPEVVKHGETG 315 (371)
T ss_pred cC--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc---------------------CCCEEEeCCCCchhhhcCCCce
Confidence 44 458999999999999999999999999999999 45999999999888773 38
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHHHHHHH
Q 003042 486 IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 486 i~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 540 (854)
++++|.|+++++++|.++++.+. ++....++.+++ ...+++...++++++-+++
T Consensus 316 ~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 316 FLVDVGDVEAMAEYALSLLEDDE-LWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred EEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999999999998654 444445555655 5678999998888776653
No 64
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.84 E-value=2.8e-20 Score=194.26 Aligned_cols=199 Identities=16% Similarity=0.112 Sum_probs=122.6
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-c-cceeecCcEEEEECCC-cc
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K-LGLSAEHGYFTRWSKN-SA 663 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~-l~liaenG~~I~~~~~-~~ 663 (854)
+|++|+||||++ +++.+++.++++|+++ +++|+.|++||||+...+..++..+. . .+++++||+.|+.... ..
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999999 6665666699999999 89999999999999999999887663 2 4689999999987432 11
Q ss_pred e----EEccccccchHHHHHHHHHHHHh---ccCCc-ceEecc-cceEEE------eeccCCCccchhhHHHHHHHHHHH
Q 003042 664 W----EICSLTRDFDWKEIAEPVMKLYT---ETTDG-SFIEDK-ETAIVW------HHQHADPHFGSCQAKELLDHLENV 728 (854)
Q Consensus 664 ~----~~~~~~~~~~~~~~v~~~~~~y~---~~~~g-~~ie~k-~~~l~~------~~~~~d~~~~~~~~~el~~~l~~~ 728 (854)
+ ............+.++.+.+.+. ....+ ...+.. ...+.. ........+......+..+.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (221)
T TIGR02463 77 EPGYPRIILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTAL 156 (221)
T ss_pred CCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHH
Confidence 1 11111111112222221111100 00000 000000 000000 000000000000011223333333
Q ss_pred hcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 729 LANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 729 l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+......+..+..++||.|++++||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 157 l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 157 LADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 33333445556788999999999999999999999 99999999999999999999999974
No 65
>PLN02423 phosphomannomutase
Probab=99.84 E-value=1.1e-19 Score=192.20 Aligned_cols=214 Identities=18% Similarity=0.192 Sum_probs=137.7
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC-c-c-cceeecCcEEEEECC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-E-K-LGLSAEHGYFTRWSK 660 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~-~-~-l~liaenG~~I~~~~ 660 (854)
++++++||+||||++ +++.+++++.++|++| ++. +.|++||||+...+.+.++.. . . ..++++||+++...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 345677999999999 8889999999999999 665 999999999999888877643 1 1 368899999998766
Q ss_pred CcceEEcccc-ccc-hHHHHHHHHHHHHh----ccCCcceEecccceEEEe--eccCCCc---------cchhhHHHHHH
Q 003042 661 NSAWEICSLT-RDF-DWKEIAEPVMKLYT----ETTDGSFIEDKETAIVWH--HQHADPH---------FGSCQAKELLD 723 (854)
Q Consensus 661 ~~~~~~~~~~-~~~-~~~~~v~~~~~~y~----~~~~g~~ie~k~~~l~~~--~~~~d~~---------~~~~~~~el~~ 723 (854)
...+...+.. .+. ...+.++....... ....+.+++..+...... +.+.... .......+..+
T Consensus 81 ~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 160 (245)
T PLN02423 81 KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVS 160 (245)
T ss_pred EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHHH
Confidence 5544432211 111 12222221111000 112244444333222111 1111000 00112234445
Q ss_pred HHHHHhcCCC-EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhcCCCCC
Q 003042 724 HLENVLANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAVADPSV 798 (854)
Q Consensus 724 ~l~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~~~~~~ 798 (854)
.+.+.+.+.. ....+|..++||+++|+|||.|++.|+ +++++++||| +.||++|++.-|.
T Consensus 161 ~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~------- 225 (245)
T PLN02423 161 VLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT------- 225 (245)
T ss_pred HHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc-------
Confidence 5555554422 233455689999999999999999997 5799999999 8999999997554
Q ss_pred CCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHH
Q 003042 799 PGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 799 ~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
.+.+ +.+++++.++|+.+.
T Consensus 226 ------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ------ceEE-----------eCCHHHHHHHHHHhc
Confidence 2343 568999999998764
No 66
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.83 E-value=2.1e-19 Score=199.90 Aligned_cols=268 Identities=16% Similarity=0.208 Sum_probs=188.7
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 263 (854)
++..+| |+|++|..+...+..+..+ ..++++.+.+|-.++.... ...+ +..+|.+-+.+....+.+..
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~~ 141 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIRE 141 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHHH
Confidence 345566 8999998776555544443 3478999999977764431 1222 34588887777655444431
Q ss_pred HHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCC
Q 003042 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (854)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KG 340 (854)
..+. ...++.++|+|||...|......+ .....+++++ .++++++++||+.+.||
T Consensus 142 ----~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 142 ----NYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ----hcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 1121 123677899999998875332211 1122245554 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|+..+.+++++++ |+++|... ....+.+.+.+.+.+ .+..+-+.+.+. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~-------~~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKR-------LGLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHH-------cCCcceEEEcCC--cccHHHHH
Confidence 9999999999988766654 88887532 222344444444443 223333445555 67999999
Q ss_pred HhCcEEEEcc-CccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHH
Q 003042 421 AIAECCVVNC-VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAV 496 (854)
Q Consensus 421 ~~ADv~vv~S-~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~ 496 (854)
+.||++++|| ..||||++.+|||+| |.|+|+|..+|..+.+. .|++++|.|++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~---------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l 320 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM---------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEAL 320 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc---------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHH
Confidence 9999999999 789999999999999 45999999888877773 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhccccc
Q 003042 497 ADAMDSALQMENQEKILRHEKHYKYISS 524 (854)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (854)
+++|..++..+++++....++.++++.+
T Consensus 321 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 321 AQALDQILSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 9999988887777887777777766644
No 67
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.83 E-value=3.7e-19 Score=201.41 Aligned_cols=281 Identities=17% Similarity=0.143 Sum_probs=183.5
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHH---------HhhcCCeEeecCHHHHHHH
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK---------SLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~---------~ll~~dligf~t~~~~~~F 261 (854)
.|+|.+|+.... ++ +++... +.++.|++| ||......--.....+.+ .+-.+|.|...+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~~~-~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKLFS-PSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHHhc-CCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 389999876643 22 233222 388999999 554322111111111111 1334677776665444333
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
... ++. .....+.++|+|||.+.|......+ ..+......++.+|+++||+.+.||+
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 221 110 0111235789999998775321110 01111122577899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHH
Q 003042 342 SLKFLAMGQLLEQH---PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (854)
Q Consensus 342 ~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~a 418 (854)
..+++|++++.+++ |++ .|+.+|..... .++..++.+++++++.+. .+....+.|.|.++.+++..
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~----~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~------~~l~~~V~f~g~~~~~~~~~ 295 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNV----RLVIAGGYDPR-VAENVEYLEELQRLAEEL------LLLEDQVIFLPSISDSQKEL 295 (392)
T ss_pred HHHHHHHHHHHhhcccccCe----EEEEEcCCCCC-CchhHHHHHHHHHHHHHh------cCCCceEEEeCCCChHHHHH
Confidence 99999999998887 554 48888854311 122234455555555440 12334556777899999999
Q ss_pred HHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHH
Q 003042 419 YYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDA 495 (854)
Q Consensus 419 ly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~ 495 (854)
+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|++++| |+++
T Consensus 296 ~l~~ad~~l~~s~~E~~g~~~lEAma~---------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~ 353 (392)
T cd03805 296 LLSSARALLYTPSNEHFGIVPLEAMYA---------------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEE 353 (392)
T ss_pred HHhhCeEEEECCCcCCCCchHHHHHHc---------------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHH
Confidence 999999999999999999999999999 45999999988887773 3788877 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHH
Q 003042 496 VADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKS 533 (854)
Q Consensus 496 ~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 533 (854)
+|++|.+++..++. ++...++.++++ .++++..++++
T Consensus 354 ~a~~i~~l~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 354 FAEAMLKLANDPDL-ADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHhChHH-HHHHHHHHHHHHHHhcCHHHHhhh
Confidence 99999999988753 444555555555 55788877764
No 68
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.83 E-value=9.2e-20 Score=192.37 Aligned_cols=214 Identities=18% Similarity=0.253 Sum_probs=143.1
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-cc--ceeecCcEEEEECCCcc
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KL--GLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l--~liaenG~~I~~~~~~~ 663 (854)
+|++||||||++ +++.+++.+ ++++ + +++|+.++++|||+...+..++..+. .. .++++||+.|.......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 589999999999 677777766 7776 6 78999999999999999999986652 12 37899999887653210
Q ss_pred eEEccccccchHHHHH-----HHHHHHHhccCCcceEeccc--ceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 664 WEICSLTRDFDWKEIA-----EPVMKLYTETTDGSFIEDKE--TAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 664 ~~~~~~~~~~~~~~~v-----~~~~~~y~~~~~g~~ie~k~--~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
.+..|.... ...+..+....++...+.+. ....+++... ++.. ....++.+.+.+. ......+
T Consensus 75 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~-~~~~~~~ 144 (236)
T TIGR02471 75 -------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ-SQAAKVI 144 (236)
T ss_pred -------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc-cCCEEEE
Confidence 011121111 00112222334554444433 1234444432 2211 1123333344332 1112345
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
.++..++|+.|+++||+.|++.+++++ |++++++++|||+.||++||+.++. +|+||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 667788999999999999999999999 9999999999999999999999875 5677765
Q ss_pred Ccccc----eEeC--CHhHHHHHHHHH
Q 003042 813 PSMAK----YYLD--DTAEVINLLEGL 833 (854)
Q Consensus 813 ~s~A~----y~l~--~~~eV~~~L~~l 833 (854)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 7664 357899988764
No 69
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.83 E-value=4e-19 Score=202.31 Aligned_cols=293 Identities=11% Similarity=0.056 Sum_probs=184.3
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeE-EEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKV-GFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i-~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
++...+| |+|+.|++.-.++..+.... ..+++ ....|. ++...--+.+-... +.+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~l-agvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALI-AGVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHh-cCCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4455577 89999999976664444333 24445 344565 33221111110001 12333444333222 33222
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCC
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKG 340 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KG 340 (854)
....+.+.. .++....+|.++|+|||+..|.+....+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 221111100 0011234678999999998886432111 11122222233 34568899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
...+++|+.++++++|+++ |+++| +|+..+ ++++++.+ .+..+.+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~e----eLk~la~e-------lgL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLRA----EAQKRAEQ-------LGILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhHH----HHHHHHHH-------cCCCCcEEECCC--hhhHHHHH
Confidence 9999999999999988765 88777 344333 34444444 334445556665 57899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vnP~d~~~~A 497 (854)
+.||+||+||.+||||++++|||+| |.|+|+|..+|+.+.+ + +|++|+|.|+++++
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~---------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa 529 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMV---------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLD 529 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHh---------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHH
Confidence 9999999999999999999999999 4599999999988877 2 48999999999999
Q ss_pred HHHHHHhcCCH--HHHHHHHHHHhccc-cccChHHHHHHHHHHHHH
Q 003042 498 DAMDSALQMEN--QEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 498 ~ai~~aL~m~~--~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
+++..+..+.. ..+....++.++++ .++++...++++++-+..
T Consensus 530 ~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 530 QACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 98854433221 22333445566666 559999999888876653
No 70
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.83 E-value=2.1e-19 Score=213.71 Aligned_cols=282 Identities=15% Similarity=0.121 Sum_probs=182.8
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEE-EecCCCC---ChhhhhcCCChHHHHHHhhcCCeEeec--CHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGF-FLHSPFP---SSEIYRTLPVRDEILKSLLNSDLIGFH--TFDY 257 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~-flH~pfP---~~e~~~~lp~r~eil~~ll~~dligf~--t~~~ 257 (854)
++..+| |+|++|.+.-.++..+..+. ..+++.+ .+|. +| ..+.|+. ....+.+.+..++.+.+- +...
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344466 89999998876666655543 3455544 4564 32 1221110 011122333334433332 2222
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCcc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMD 336 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld 336 (854)
++.+.. .+| ....+|.++|+|||...|.+ .+........++... .+.++|++|||++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 223322 111 22346888999999887742 121111122222222 2467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhH
Q 003042 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (854)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el 416 (854)
+.||+..+++||.++++++|+++ |+++|. |+.. +++++++.+ .+....+.|.|.. +++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~-------lgL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQR-------LGMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHH-------cCCCCcEEEcCCc--chH
Confidence 99999999999999999999765 888874 3332 334444444 3445567777764 579
Q ss_pred HHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCH
Q 003042 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~ 493 (854)
..+|+.||+||+||.+|||+++++|||+| +.|+|+|..+|+.+.+. .|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~---------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~ 644 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFS---------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTV 644 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHc---------------------CCeEEEECCCChHHHccCCCCEEEeCCCCC
Confidence 99999999999999999999999999999 45999999999888883 3899998875
Q ss_pred --HHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHH
Q 003042 494 --DAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQD 537 (854)
Q Consensus 494 --~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 537 (854)
++++++|.+++......... .++.++++ .++++...++++++-
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l-~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGI-ARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHH-HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 68999999888754333333 23445555 568888888877654
No 71
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.82 E-value=1.5e-18 Score=198.39 Aligned_cols=282 Identities=15% Similarity=0.146 Sum_probs=192.6
Q ss_pred CeEEEeCcccch-HHHHHHhccCCCeEEEEecCCCCChhhhhc-CC--Ch----HHHHHH-hhcCCeEeecCHHHHHHHH
Q 003042 192 DYVWIHDYHLMV-LPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-LP--VR----DEILKS-LLNSDLIGFHTFDYARHFL 262 (854)
Q Consensus 192 D~vwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~e~~~~-lp--~r----~eil~~-ll~~dligf~t~~~~~~Fl 262 (854)
|+|++|...+.. ...++-++..++++.+..|.-||..-.-.. .+ .. ..+.+. +-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 999999766543 333333444467788888876653311110 10 00 111122 3358888888877666553
Q ss_pred HHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccC
Q 003042 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFK 339 (854)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~K 339 (854)
+ .+ ....++.++|+|||.+.|..... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12346788999999988753211 1123355555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHH
Q 003042 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (854)
Q Consensus 340 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~al 419 (854)
|+..+++|++++ +++|+ +.|+++| +|+..++++ +++.+ .+...| .|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG-----~g~~~~~l~----~~~~~-------~~l~~v-~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICG-----QGGGKARLE----KMAQC-------RGLPNV-HFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEEC-----CChhHHHHH----HHHHH-------cCCCce-EEeCCCCHHHHHHH
Confidence 999999999876 44555 4488777 344433343 33333 233334 45678999999999
Q ss_pred HHhCcEEEEccCccCCCCc----ceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc--cccC-CCceEeCCCC
Q 003042 420 YAIAECCVVNCVRDGMNLV----PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPSL-SGAIRVNPWN 492 (854)
Q Consensus 420 y~~ADv~vv~S~~EG~~Lv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~ai~vnP~d 492 (854)
|+.||++|+||..|+++++ .+|||+| |.|+|+|..+|. .+.+ ..|++++|.|
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~---------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d 359 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS---------------------GRNVVATAEPGTELGQLVEGIGVCVEPES 359 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc---------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCC
Confidence 9999999999999996654 5899999 458999988774 2444 5699999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcccc-ccChHHHHHHHHHHHHHHH
Q 003042 493 VDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLERAC 542 (854)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 542 (854)
++++|++|.+++++++ ++....++.++++. ++|+...+++|++.++++.
T Consensus 360 ~~~la~~i~~l~~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 360 VEALVAAIAALARQAL-LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999999987764 45556666677665 6899999999999888653
No 72
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.82 E-value=4.2e-19 Score=197.16 Aligned_cols=275 Identities=17% Similarity=0.154 Sum_probs=198.1
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh--hhhh---cCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS--EIYR---TLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~--e~~~---~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
.++ |+||+|.+..... +....++.+.+|..+|.. +.+. ....+.-+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998887766 456899999999766532 1111 01123344455667899988887666666
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
.+.. +. ...++.++|+|+|...+.... ... ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA-----EAE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc-----hHH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 10 123567899999988764211 111 1112223578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+..+.+++|+++ |+++|... .........++ + .+..+.+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARLR----E-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHHH----H-------cCCCCeEEECCCCChhHHHHHHh
Confidence 999999999998887554 77777432 11122222221 1 23345677888999999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAM 500 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai 500 (854)
.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+ .+++.+++.|.++++++|
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~---------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i 330 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC---------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAI 330 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC---------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHH
Confidence 999999999999999999999999 4589999988877776 568999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhccccccChHHHHHHHH
Q 003042 501 DSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
.++++.++ .+....+..++++.++++..++++++
T Consensus 331 ~~l~~~~~-~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 331 ERLLEDPA-LREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHhcCHH-HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 99987554 44555555667888899999998875
No 73
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.82 E-value=2.1e-18 Score=196.75 Aligned_cols=272 Identities=14% Similarity=0.100 Sum_probs=188.9
Q ss_pred CCCCCeEEEeCcccch-HHHHHHhccCCCeEEEEecCC--CCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHH
Q 003042 188 NPDEDYVWIHDYHLMV-LPSFLRKRFHRVKVGFFLHSP--FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 188 ~~~~D~vwihDyhl~l-lp~~lr~~~~~~~i~~flH~p--fP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
+++.|+++.|-+|-.. ...+++++....++....|-. ++.......++.++.+ +-.+|.|.+.+....+.+.+.
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 3444777776555433 334566766666788899932 1111111122233333 346899988887666544321
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~ 344 (854)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122356788999998765321 011356789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHh--
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI-- 422 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~-- 422 (854)
++|+.++.+++|+.. +.++.+|. +++..++++.+ .+ .+..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~~~~----~~-------~~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLKELA----ES-------KPENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHHHHH----Hh-------cCCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999998764 66776663 34434444433 22 122345667889999999999986
Q ss_pred CcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCC---ceEeCC-CCHHHHHH
Q 003042 423 AECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG---AIRVNP-WNVDAVAD 498 (854)
Q Consensus 423 ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP-~d~~~~A~ 498 (854)
||+|+.||..|||+++++|||+| |.|+|+|..+|..+.+.+ |++++| .|++++|+
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~---------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~ 369 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF---------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVS 369 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc---------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHH
Confidence 78999999999999999999999 459999999998888843 688876 48999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHH
Q 003042 499 AMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (854)
+|.++++.++ ++....++.++++ .++++..+.++|+
T Consensus 370 ~I~~ll~~~~-~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 370 SLSKFIDNEE-EYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999998554 5555556666665 5689888888775
No 74
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.82 E-value=1.9e-18 Score=191.97 Aligned_cols=274 Identities=17% Similarity=0.168 Sum_probs=193.8
Q ss_pred HHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHH
Q 003042 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDY 257 (854)
Q Consensus 178 ~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~ 257 (854)
.++..+ +..++ |+|++|..+...+..++..+....+..+.+|.+-. +... ....+-+.+-.+|.+-..+...
T Consensus 70 ~~~~~~-~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~vi~~s~~~ 141 (355)
T cd03799 70 VLAREL-RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRSP-DAIDLDEKLARADFVVAISEYN 141 (355)
T ss_pred HHHHHH-HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----cccC-chHHHHHHHhhCCEEEECCHHH
Confidence 333333 34455 89999987766666666666667889999985321 1111 1123344455799999988877
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~ 337 (854)
.+.+.+. . +....++.++|+|+|...+.... .....++..|+++||+.+
T Consensus 142 ~~~l~~~----~---------------~~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~ 190 (355)
T cd03799 142 RQQLIRL----L---------------GCDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVE 190 (355)
T ss_pred HHHHHHh----c---------------CCCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeecc
Confidence 7665431 0 12234678899999988774211 112245678999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|++++.+++|++ .|+.+|.. +...++++ .+.+ .+..+.+.+.+.++.+|+.
T Consensus 191 ~k~~~~l~~~~~~l~~~~~~~----~l~i~G~~-----~~~~~~~~----~~~~-------~~~~~~v~~~g~~~~~~l~ 250 (355)
T cd03799 191 KKGLDYLLEALALLKDRGIDF----RLDIVGDG-----PLRDELEA----LIAE-------LGLEDRVTLLGAKSQEEVR 250 (355)
T ss_pred ccCHHHHHHHHHHHhhcCCCe----EEEEEECC-----ccHHHHHH----HHHH-------cCCCCeEEECCcCChHHHH
Confidence 999999999999998776654 47777742 22233333 3333 2334567788899999999
Q ss_pred HHHHhCcEEEEccCc------cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEe
Q 003042 418 PYYAIAECCVVNCVR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRV 488 (854)
Q Consensus 418 aly~~ADv~vv~S~~------EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~v 488 (854)
.+|+.||++++||.. ||||++++|||+| |.|+|+|..+|..+.+. .|+++
T Consensus 251 ~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~---------------------G~Pvi~~~~~~~~~~i~~~~~g~~~ 309 (355)
T cd03799 251 ELLRAADLFVLPSVTAADGDREGLPVVLMEAMAM---------------------GLPVISTDVSGIPELVEDGETGLLV 309 (355)
T ss_pred HHHHhCCEEEecceecCCCCccCccHHHHHHHHc---------------------CCCEEecCCCCcchhhhCCCceEEe
Confidence 999999999999999 9999999999999 45899998877776662 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHH
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAK 532 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~ 532 (854)
+|.|+++++++|.+++++++. +....+..++++ ..+++...++
T Consensus 310 ~~~~~~~l~~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 310 PPGDPEALADAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred CCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999999999999987754 444444555555 4577666554
No 75
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.81 E-value=1.9e-18 Score=190.00 Aligned_cols=287 Identities=18% Similarity=0.160 Sum_probs=203.0
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhh----cCCChHHHHHHhhcCCeEeecCHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR----TLPVRDEILKSLLNSDLIGFHTFDYA 258 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~----~lp~r~eil~~ll~~dligf~t~~~~ 258 (854)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444466 899999999887776 4455678999999999887543211 01111222233456788888887666
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCcccc
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLF 338 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~ 338 (854)
+.+.+. +.....++.++|+|+|...+.... ...........+++.++++||+++.
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 655431 011124678899999988764211 0011111112467889999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHH
Q 003042 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (854)
Q Consensus 339 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~a 418 (854)
||+..+++|+..+.+++|++ .|+.+|. ++....+++.+ .+ .+..+.+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~----~l~i~G~-----~~~~~~~~~~~----~~-------~~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDV----RLVIVGD-----GPLREELEALA----AE-------LGLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCe----EEEEEeC-----cHHHHHHHHHH----HH-------hCCCcceEEEeccChhhHHH
Confidence 99999999999998888654 4777772 23333333333 22 22334556777899999999
Q ss_pred HHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHH
Q 003042 419 YYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDA 495 (854)
Q Consensus 419 ly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~ 495 (854)
+|+.||++++|+..||+|++++|||+| |.|+|++...|..+.+. .|+++++.|+++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~---------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 330 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAA---------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEA 330 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHc---------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHHH
Confidence 999999999999999999999999999 45999999988888874 489999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 496 VADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 496 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
++++|.++++.++..++...+......+.+++..+++++++.+
T Consensus 331 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 331 LAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999999998776554444443335667799999999887654
No 76
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.81 E-value=1.2e-18 Score=193.01 Aligned_cols=273 Identities=20% Similarity=0.225 Sum_probs=182.8
Q ss_pred CeEEEeCcc-cchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHH------HHHhhcCCeEeecCHHHHHHHHHH
Q 003042 192 DYVWIHDYH-LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI------LKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 192 D~vwihDyh-l~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~ei------l~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
|+|++|+.. ....+.....+..+.++.+..|..++...... -+.+..+ -..+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-
Confidence 899999843 22233322223357889999997765433100 0011100 11223466666665433322211
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi 341 (854)
.+...++.++|+|+|.+.+.... ... . ++.+ .++++++++||+++.||+
T Consensus 167 --------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~--~---~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 167 --------------------LGLKAPIAVIPNGVDIPPFAALP---SRG--R---RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred --------------------hCCcccEEEcCCCcChhccCcch---hhh--h---hhhccCCCCCcEEEEEeCcchhcCH
Confidence 12234678899999998775321 111 0 2322 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+.++.+++|+++ |+++|... . .+. ..++.++.+ .+..+.+.+.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~---~-~~~---~~~~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE---G-GYR---AELKQIAAA-------LGLEDRVTFTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC---c-chH---HHHHHHHHh-------cCccceEEEcCCCChHHHHHHHh
Confidence 999999999998888765 88777422 1 111 222222222 23445667788999999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-C-ceEeCCCCHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G-AIRVNPWNVDAVADA 499 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-ai~vnP~d~~~~A~a 499 (854)
.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. + ++++ |.+.++++++
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~---------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 338 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALAC---------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAA 338 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhc---------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHH
Confidence 999999999999999999999999 45999999988888773 3 4555 5566999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHH
Q 003042 500 MDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (854)
|.++++++ +++....++.+++ .+++++...+++++
T Consensus 339 i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 339 LRRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999988 4555555666666 56788888887765
No 77
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.81 E-value=2.2e-18 Score=200.14 Aligned_cols=282 Identities=13% Similarity=0.092 Sum_probs=184.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChh-hhhcC----CChHHHHHHhhcCCeEe
Q 003042 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSE-IYRTL----PVRDEILKSLLNSDLIG 251 (854)
Q Consensus 177 ~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e-~~~~l----p~r~eil~~ll~~dlig 251 (854)
+.|.+++ . . .+.|+|.++--.... +.++ +..+.+++..++|.-.=+.. .-..- +.-+..++.+-.+|.|-
T Consensus 201 ~~f~~~L-~-~-~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI 275 (500)
T TIGR02918 201 AYFLKQL-N-L-TKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFI 275 (500)
T ss_pred HHHHHHH-h-C-CCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEE
Confidence 4455554 2 2 234898887555433 4444 55668999999995321000 00000 11122233344467777
Q ss_pred ecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEE
Q 003042 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILG 331 (854)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~ 331 (854)
..|..-.+........ +.+...+|.++|+|++...+. +. ....+..|++
T Consensus 276 ~~S~~~~~~l~~~~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~ 324 (500)
T TIGR02918 276 TATDIQNQILKNQFKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIIT 324 (500)
T ss_pred ECCHHHHHHHHHHhhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEE
Confidence 6665443333221111 122234677899998754332 10 0123468999
Q ss_pred ecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC
Q 003042 332 VDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (854)
Q Consensus 332 VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~ 411 (854)
|||+.+.||+..+++|+.++.+++|+++ |+++|. |++. +++++++.+. +....+.+.|..
T Consensus 325 vGrl~~~Kg~~~li~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~-------~l~~~V~f~G~~ 384 (500)
T TIGR02918 325 ASRLAKEKHIDWLVKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINEN-------QAQDYIHLKGHR 384 (500)
T ss_pred EeccccccCHHHHHHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHc-------CCCCeEEEcCCC
Confidence 9999999999999999999999999765 777773 3433 3344444442 223455566643
Q ss_pred ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc-cccccCC---CceE
Q 003042 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIR 487 (854)
Q Consensus 412 ~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~ 487 (854)
++..+|+.||++|+||.+||||++++||||| |.|+|+|... |..+.+. +|++
T Consensus 385 ---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~---------------------G~PVI~~dv~~G~~eiI~~g~nG~l 440 (500)
T TIGR02918 385 ---NLSEVYKDYELYLSASTSEGFGLTLMEAVGS---------------------GLGMIGFDVNYGNPTFIEDNKNGYL 440 (500)
T ss_pred ---CHHHHHHhCCEEEEcCccccccHHHHHHHHh---------------------CCCEEEecCCCCCHHHccCCCCEEE
Confidence 6889999999999999999999999999999 4599999986 6666662 4899
Q ss_pred eCC----CC----HHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 488 VNP----WN----VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 488 vnP----~d----~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
|++ .| ++++|++|.++|+ + ..++...+..++..++++...-++++.+-+++
T Consensus 441 v~~~~~~~d~~~~~~~la~~I~~ll~-~-~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 441 IPIDEEEDDEDQIITALAEKIVEYFN-S-NDIDAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred EeCCccccchhHHHHHHHHHHHHHhC-h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 973 34 8999999999984 3 35666667777788889988888888766543
No 78
>PLN02382 probable sucrose-phosphatase
Probab=99.81 E-value=6.8e-19 Score=199.06 Aligned_cols=227 Identities=17% Similarity=0.231 Sum_probs=146.7
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHH-HHcccCCCCeEEEEcCCCccchhhhhcCCc---ccceeecCcEEE
Q 003042 581 NKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSIL-NDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KLGLSAEHGYFT 656 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL-~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~l~liaenG~~I 656 (854)
..+...+|++||||||++.. .++.++.....++ +++ .++|+.++++|||+...+..+...++ .-.+++.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 34567899999999999821 1447776666666 887 89999999999999888777765442 122677799999
Q ss_pred EECCCcceEEccccccchHHHHHH---------HHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHH
Q 003042 657 RWSKNSAWEICSLTRDFDWKEIAE---------PVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLEN 727 (854)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~ 727 (854)
.+.+... .+..|...+. +.+..|.........+.+...+.+...+. ...++...+.+
T Consensus 83 ~~~~~~~-------~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~ 148 (413)
T PLN02382 83 AYGESMV-------PDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSE 148 (413)
T ss_pred EeCCCCc-------cChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHH
Confidence 8754221 1122322222 11111211111111122222333322211 12234445555
Q ss_pred HhcCC---CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccE
Q 003042 728 VLANE---PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEV 804 (854)
Q Consensus 728 ~l~~~---~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~ 804 (854)
.+... ...+.++..++||+|+++|||.|+++|++++...|++++++++|||+.||++||+.++.
T Consensus 149 ~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~------------- 215 (413)
T PLN02382 149 RLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV------------- 215 (413)
T ss_pred HHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------
Confidence 45322 23456788999999999999999999999985558899999999999999999999983
Q ss_pred EEEEecCCC----c--------ccceEeC---CHhHHHHHHHHHHhc
Q 003042 805 FACTVGQKP----S--------MAKYYLD---DTAEVINLLEGLATE 836 (854)
Q Consensus 805 ~aV~vG~~~----s--------~A~y~l~---~~~eV~~~L~~l~~~ 836 (854)
++|+||++. . .|++++. +.+++.+.|+++.-.
T Consensus 216 ~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 216 YGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred CEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 267778752 2 2355533 478899999987643
No 79
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.81 E-value=6.7e-19 Score=200.18 Aligned_cols=187 Identities=12% Similarity=-0.024 Sum_probs=127.1
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc--cccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM--DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl--d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
.++.++|+|||++.+... ++. ...+ ...++++|++|+|. ++.||+..+++|+.++ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~---~~~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAIL---AEL----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccc---ccc----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 367889999997543211 000 0001 12467789999994 4789999999999875 23 356888
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
+|... ... . ..++++....+..++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 87421 100 0 12444443346789999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhc-ccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYK-YIS 523 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~-~v~ 523 (854)
|.|+|+|+.+|+.+.+. +|++|+|.|++++|+++...+.... .....+..++ ...
T Consensus 330 --------------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~~--~~~~~~~~r~~~~~ 387 (405)
T PRK10125 330 --------------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQAV--FGTTLAEFSQRSRA 387 (405)
T ss_pred --------------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHHh--hhhHHHHHHHHHHH
Confidence 46999999999887773 4999999999999986543221110 0000122233 345
Q ss_pred ccChHHHHHHHHHHHH
Q 003042 524 SHDVAYWAKSIDQDLE 539 (854)
Q Consensus 524 ~~~~~~W~~~~l~~l~ 539 (854)
.++....++++++-.+
T Consensus 388 ~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 388 AYSGQQMLEEYVNFYQ 403 (405)
T ss_pred hCCHHHHHHHHHHHHH
Confidence 6899998888876543
No 80
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.81 E-value=2.3e-18 Score=191.24 Aligned_cols=282 Identities=18% Similarity=0.187 Sum_probs=190.1
Q ss_pred HHhcCCCCCeEEEeCcc-cc---hHHHHHH-hccCCCeEEEEecCCCCChhhhhcCCChHHHHH-HhhcCCeEeecCHHH
Q 003042 184 MEVINPDEDYVWIHDYH-LM---VLPSFLR-KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDY 257 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyh-l~---llp~~lr-~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~ 257 (854)
+...+| |+|++|+.+ ++ ......+ .+..+.++.+.+|.+.|....+ ....+.+ -+-.+|.|-+.+.+.
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~----~~~~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRP----GDRALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccch----hhhHHHHHHHhcCCEEEEeeHHH
Confidence 344466 899998732 21 1111111 1236789999999862222111 1112222 234589998887555
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~ 337 (854)
++++.... . ..++.++|+|++...+.... . . +......++.+|+++||+.+
T Consensus 146 ~~~~~~~~--------------------~-~~~~~~i~~~~~~~~~~~~~------~-~-~~~~~~~~~~~i~~~G~~~~ 196 (366)
T cd03822 146 LRALLLRA--------------------Y-PEKIAVIPHGVPDPPAEPPE------S-L-KALGGLDGRPVLLTFGLLRP 196 (366)
T ss_pred HHHHHhhc--------------------C-CCcEEEeCCCCcCcccCCch------h-h-HhhcCCCCCeEEEEEeeccC
Confidence 55554310 0 23678899999977654211 1 1 11112256789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc-EEEEcCCCChhhH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP-IVIIKEPLSTQDK 416 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p-v~~~~~~~~~~el 416 (854)
.||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+ .+..+ |.++++.++.+++
T Consensus 197 ~K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~-------~~~~~~v~~~~~~~~~~~~ 261 (366)
T cd03822 197 YKGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAER-------LGLADRVIFINRYLPDEEL 261 (366)
T ss_pred CCCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHh-------cCCCCcEEEecCcCCHHHH
Confidence 9999999999999998887655 88777422 1111111111122222 22333 4444555999999
Q ss_pred HHHHHhCcEEEEccCcc--CCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---CCceEeCCC
Q 003042 417 VPYYAIAECCVVNCVRD--GMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SGAIRVNPW 491 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~E--G~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~ 491 (854)
..+|+.||++++||..| |++++++|||+| |.|+|+|..+| .+.+ ..|+++++.
T Consensus 262 ~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~---------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~ 319 (366)
T cd03822 262 PELFSAADVVVLPYRSADQTQSGVLAYAIGF---------------------GKPVISTPVGH-AEEVLDGGTGLLVPPG 319 (366)
T ss_pred HHHHhhcCEEEecccccccccchHHHHHHHc---------------------CCCEEecCCCC-hheeeeCCCcEEEcCC
Confidence 99999999999999999 999999999999 45899999888 6666 348999999
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 492 NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
|+++++++|.++++.+.. +....++.++++.++++..+++++.+.+
T Consensus 320 d~~~~~~~l~~l~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 320 DPAALAEAIRRLLADPEL-AQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred CHHHHHHHHHHHHcChHH-HHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 999999999999987654 4455667788888899999999887654
No 81
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.81 E-value=4e-18 Score=188.10 Aligned_cols=281 Identities=16% Similarity=0.151 Sum_probs=190.9
Q ss_pred HhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh-hcCCeEeecCHHHHHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~Fl~ 263 (854)
+..+| |+|++|+++...+..+........++.+..|..++...-+ ..+....+.+-+ -.+|.+-..+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 44566 8999999997777776666546788999999776543200 001111122221 2356664444433333322
Q ss_pred HHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCC
Q 003042 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (854)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KG 340 (854)
. + ....++.++|+|+|...+..... .....++++ .++.+|+++||+++.||
T Consensus 154 ~-----~---------------~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----G---------------YPPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----C---------------CChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 1 11235678899999887653211 112233344 46788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|+..+.+++|+++ |+.+|... .....+.... .+ .+..+.+.+.+. .+|+..+|
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~-------~~~~~~v~~~g~--~~~~~~~~ 266 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE-------LGLEDKVILLGE--RSDVPALL 266 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh-------cCCCceEEEccc--cccHHHHH
Confidence 9999999999988887654 77777432 2122222211 01 222334445553 57899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-CceEeCCCCHHHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADA 499 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~a 499 (854)
+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+. .|+++++.|+++++++
T Consensus 267 ~~adi~v~ps~~e~~~~~~~Ea~a~---------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~ 325 (365)
T cd03807 267 NALDVFVLSSLSEGFPNVLLEAMAC---------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEA 325 (365)
T ss_pred HhCCEEEeCCccccCCcHHHHHHhc---------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHH
Confidence 9999999999999999999999999 45999999999888875 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHH
Q 003042 500 MDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQD 537 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 537 (854)
|.+++++++ ++....+..++++ ..+++...++++.+.
T Consensus 326 i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 326 IEALLADPA-LRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHHhChH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999874 4444555566665 458988888887764
No 82
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.80 E-value=2.8e-18 Score=190.32 Aligned_cols=270 Identities=19% Similarity=0.264 Sum_probs=185.4
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCC---ChH----HHH-HHhhcCCeEeecC
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP---VRD----EIL-KSLLNSDLIGFHT 254 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp---~r~----eil-~~ll~~dligf~t 254 (854)
+.+..+| |+|++|+...+........+..++++.+.+|.+|+....+...+ ... .+. ..+-.+|.+-+.+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455666 89999987655544444444457899999998876322111111 011 111 2234578887777
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEE
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILG 331 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~ 331 (854)
......+.. .+...++.++|+|+|...+.... ... .++.+ .++++|++
T Consensus 157 ~~~~~~~~~---------------------~~~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE---------------------YGVKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh---------------------cCCCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEEEE
Confidence 754444322 01122478899999987765321 111 12222 46788999
Q ss_pred ecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC
Q 003042 332 VDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (854)
Q Consensus 332 VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~ 411 (854)
+||+.+.||+..+++|++.+.++.+++ .|+.+|. ++... ++.+++.+. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~----~l~i~G~-----~~~~~----~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDV----KLVIVGD-----GPERE----ELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCe----EEEEEeC-----CchHH----HHHHHHHHc-------CCCCcEEEeccC
Confidence 999999999999999999998876654 4777773 22222 333333332 233456677889
Q ss_pred ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEe
Q 003042 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRV 488 (854)
Q Consensus 412 ~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~v 488 (854)
+.+++..+|+.||+++.||..||+|++.+|||+| |.|+|++..+|..+.+. .|+++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~---------------------g~PvI~~~~~~~~~~i~~~~~g~~~ 326 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAA---------------------GLPVVAVDAPGLPDLVADGENGFLF 326 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHc---------------------CCcEEEeCCCChhhheecCceeEEe
Confidence 9999999999999999999999999999999999 45899999888887773 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccC
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHD 526 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 526 (854)
++.|. +++++|.+++++++.. +...+..++++.+++
T Consensus 327 ~~~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 327 PPGDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCCCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 99888 9999999999887654 455556666666555
No 83
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.80 E-value=4.4e-18 Score=187.85 Aligned_cols=283 Identities=19% Similarity=0.200 Sum_probs=198.7
Q ss_pred hcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHH
Q 003042 186 VINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (854)
Q Consensus 186 ~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~ 265 (854)
..++ |+|++|......+...+..+..++++.+..|.+++....... ..+.-.-..+-.+|.+-+.+......|.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999655555444444445568899999987764322211 1233333445678999998877666655310
Q ss_pred HhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHH
Q 003042 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (854)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l 345 (854)
....++.++|+|+|...+..... .....+ ....++++++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 11235778999999887653211 111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcE
Q 003042 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (854)
Q Consensus 346 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv 425 (854)
+|++.+.+++|++ .|+.+|. ++....+++.++ + .+..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~----~l~i~g~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDV----HLVIVGD-----GPLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCe----EEEEEcC-----CcchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 9999998877654 4776663 233233333332 2 334456677788999999999999999
Q ss_pred EEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHH
Q 003042 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDS 502 (854)
Q Consensus 426 ~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~ 502 (854)
++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|.+
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~---------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~ 340 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC---------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILR 340 (377)
T ss_pred eecchhhccCChHHHHHHhc---------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHH
Confidence 99999999999999999999 45999999988877773 3589999999999999999
Q ss_pred HhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 503 ALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 503 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
+++++.. +...+........+++..+++++.+.+++
T Consensus 341 ~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 341 LLADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 9998765 33333444455668888888888776653
No 84
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.80 E-value=2.8e-18 Score=193.00 Aligned_cols=282 Identities=18% Similarity=0.081 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC-ChhhhhcCC---ChHHHHHHhhc
Q 003042 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP-SSEIYRTLP---VRDEILKSLLN 246 (854)
Q Consensus 171 ~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP-~~e~~~~lp---~r~eil~~ll~ 246 (854)
...+.-+.|-+++.. .+ ..|+|.+|-.+.... .+.......+...++|...- ....-...+ ..+.++..+-.
T Consensus 82 ~~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (372)
T cd04949 82 NEEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDK 157 (372)
T ss_pred CHHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhh
Confidence 344444555555543 22 348999987776655 23333345667788885321 110000011 22445555667
Q ss_pred CCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCC
Q 003042 247 SDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGK 326 (854)
Q Consensus 247 ~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~ 326 (854)
+|.|.+.+..-.+.+.... + ...++.++|+|++...+.... .....+
T Consensus 158 ~d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~ 204 (372)
T cd04949 158 VDGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKP 204 (372)
T ss_pred CCEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCC
Confidence 8989888876666654311 1 111267899999987764210 011356
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEE
Q 003042 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (854)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~ 406 (854)
..++++||+.+.||+..+++|+.++.+++|+++ |+++|.. ++...++..+ .+ .+....+.
T Consensus 205 ~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~-------~~~~~~v~ 264 (372)
T cd04949 205 HKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EE-------LGLEDYVF 264 (372)
T ss_pred CeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HH-------cCCcceEE
Confidence 689999999999999999999999999999876 7777743 2223333332 22 23334556
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc-cccccCC--
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS-- 483 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~-- 483 (854)
+.|. .+++..+|+.||++|+||..||||++.+|||+| |.|+|+|+.. |..+.+.
T Consensus 265 ~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~---------------------G~PvI~~~~~~g~~~~v~~~ 321 (372)
T cd04949 265 LKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH---------------------GLPVISYDVNYGPSEIIEDG 321 (372)
T ss_pred EcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhC---------------------CCCEEEecCCCCcHHHcccC
Confidence 6663 578999999999999999999999999999999 4589999877 6666662
Q ss_pred -CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 484 -GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 484 -~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
.|++++|.|++++|++|..+++.++ .+....+..++...++++..++++
T Consensus 322 ~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 322 ENGYLVPKGDIEALAEAIIELLNDPK-LLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred CCceEeCCCcHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHhhHHHHHhc
Confidence 4899999999999999999998774 444445555555667777766654
No 85
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.79 E-value=1.1e-18 Score=201.63 Aligned_cols=201 Identities=17% Similarity=0.138 Sum_probs=131.3
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECC
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~ 660 (854)
.+++|+|++|+||||++ .+..+++.++++|+++ +++|+.|++||||+...+..++..+. ..+++++||+.|+.+.
T Consensus 413 ~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred CceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 46789999999999999 6677888999999999 89999999999999999988886653 3468999999999865
Q ss_pred Cc-------------ceEEccccccchHHHHHHHHHHHHh---c---cCCcceEecccceEEEe----ecc--------C
Q 003042 661 NS-------------AWEICSLTRDFDWKEIAEPVMKLYT---E---TTDGSFIEDKETAIVWH----HQH--------A 709 (854)
Q Consensus 661 ~~-------------~~~~~~~~~~~~~~~~v~~~~~~y~---~---~~~g~~ie~k~~~l~~~----~~~--------~ 709 (854)
+. .+..........+.+.+..+.+.+. . ...+.++.... ...+. +.. +
T Consensus 489 ~~~~~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a~~a 567 (694)
T PRK14502 489 DYFRLPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQAELA 567 (694)
T ss_pred CcccccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHHHHH
Confidence 41 0111011111123333332222110 0 00111111110 00000 000 0
Q ss_pred C-----CccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEE--eCCccc
Q 003042 710 D-----PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCI--GDDRSD 782 (854)
Q Consensus 710 d-----~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlai--GDs~ND 782 (854)
. ..+......+.++.+.+.+......+..+..++||. +++|||.|+++|++.+ |++.+++++| ||+.||
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs~ND 643 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDSEND 643 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCcHhh
Confidence 0 000001112344555555554455666699999999 5999999999999999 9999999999 999999
Q ss_pred HHHHHHhhh
Q 003042 783 EDMFESIEQ 791 (854)
Q Consensus 783 ~~Mf~~ag~ 791 (854)
++||++++.
T Consensus 644 isMLe~Ag~ 652 (694)
T PRK14502 644 YSMLETVDS 652 (694)
T ss_pred HHHHHhCCc
Confidence 999999996
No 86
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.79 E-value=5.1e-18 Score=188.19 Aligned_cols=274 Identities=18% Similarity=0.150 Sum_probs=190.5
Q ss_pred HhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh----HHHHHH-hhcCCeEeecCHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR----DEILKS-LLNSDLIGFHTFDYAR 259 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r----~eil~~-ll~~dligf~t~~~~~ 259 (854)
+..+| |+|++|......+...+..+..++++.+++|..||..-........ ..+.+. .-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654433333333345788999999888733221111111 122222 2357888887776655
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDL 337 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~ 337 (854)
.+.. .+ ..++.++|+|+|...|...... ...++++ .++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1246788999998877532211 1112222 46788999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|+.++.++ |+++ |+.+|. +++...++ +..+-+.+.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~-----------------~~~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE-----------------ARYPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh-----------------ccCCcEEEEeccCHHHHH
Confidence 99999999999999876 6654 777773 22222222 011234455668999999
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVD 494 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~ 494 (854)
.+|+.||+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|.+
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~---------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~ 320 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS---------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAE 320 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc---------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHH
Confidence 9999999999999999999999999999 45999999999888874 48999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 495 AVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
+++++|.++++.++ ++....+..++.+.++++..+++++++.+
T Consensus 321 ~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 321 AFAAALAALLADPE-LRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHcCHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999998765 44555566677778899999998887643
No 87
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.79 E-value=7.6e-18 Score=187.43 Aligned_cols=278 Identities=15% Similarity=0.208 Sum_probs=194.5
Q ss_pred hcCCCCCeEEEeC-cccchHHHHHHhccCCCeEEEEecCCCCChhhhhcC-CC-------hHHHH-HHhhcCCeEeecCH
Q 003042 186 VINPDEDYVWIHD-YHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL-PV-------RDEIL-KSLLNSDLIGFHTF 255 (854)
Q Consensus 186 ~~~~~~D~vwihD-yhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~l-p~-------r~eil-~~ll~~dligf~t~ 255 (854)
..+| |+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+. ..+..+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 3445 8999998 445566666666666899999999988854332211 11 11111 23456899999988
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM 335 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl 335 (854)
..++.|.. .+ ....++.++|+|++...+...... ..... .....++.+|+++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCc
Confidence 87776651 01 122367889999998876532110 00111 1122577899999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhh
Q 003042 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (854)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~e 415 (854)
.+.||+..+++|+.++.+. |++ .|+++|. ++....+++.+.. .+...+++++ .++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~~~-----------~~~~~v~~~g-~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELAKA-----------LGLDNVTFLG-RVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHHHH-----------cCCCcEEEeC-CCChHH
Confidence 9999999999999998776 554 4777763 3333333333211 2233455555 899999
Q ss_pred HHHHHHhCcEEEEccCccCC-----CCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceE
Q 003042 416 KVPYYAIAECCVVNCVRDGM-----NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIR 487 (854)
Q Consensus 416 l~aly~~ADv~vv~S~~EG~-----~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~ 487 (854)
+.++|+.||++++||..|++ +++.+|||+| |.|+|+|..+|..+.+. .|++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~---------------------G~pvi~~~~~~~~~~~~~~~~g~~ 346 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA---------------------GKPVLASVDGESAELVEEAGAGLV 346 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHC---------------------CCcEEEecCCCchhhhccCCcceE
Confidence 99999999999999999876 5557999999 45999999999988883 4899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc-ccChHHHHHHH
Q 003042 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSI 534 (854)
Q Consensus 488 vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 534 (854)
+++.|+++++++|.+++..++ ++....+..++++. .+++..+++++
T Consensus 347 ~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 347 VPPGDPEALAAAILELLDDPE-ERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred eCCCCHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999999999996554 55555566666666 78999888875
No 88
>PHA01633 putative glycosyl transferase group 1
Probab=99.79 E-value=1.3e-18 Score=190.47 Aligned_cols=193 Identities=15% Similarity=0.188 Sum_probs=141.5
Q ss_pred eccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003042 294 LPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS 373 (854)
Q Consensus 294 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 373 (854)
+|.|||++.|.+... ...+.++++...+.+..++++|||+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999998863210 01112222222335677899999999999999999999999999998876777776651
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCCc-cEEEEc--CCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 374 SGKDVQDLLSDTNRIAEEINLNFGKPGYE-PIVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 374 ~~~~~~~l~~~v~~~v~~In~~~~~~~~~-pv~~~~--~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
. .+ .+ .+.. .|.++. +.++.+++.++|+.||+||+||..||||++++|||+|
T Consensus 192 --~---~~----~~-----------l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----- 246 (335)
T PHA01633 192 --K---QF----TQ-----------LEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----- 246 (335)
T ss_pred --H---HH----HH-----------cCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----
Confidence 1 11 11 1111 255543 6678899999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCC---------------------ceEeCCCCHHHHHHHHHHHhcCCHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG---------------------AIRVNPWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------ai~vnP~d~~~~A~ai~~aL~m~~~ 509 (854)
|.|+|+|..+|..+...+ |+.++++|++++|++|.+++.+...
T Consensus 247 ----------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~ 310 (335)
T PHA01633 247 ----------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDR 310 (335)
T ss_pred ----------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccCh
Confidence 458999988776664321 4577889999999999999887643
Q ss_pred HHHHHHHHHhccccccChHHHHHHHH
Q 003042 510 EKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 510 er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
+ .|..+.++..+++++..-+++|+
T Consensus 311 ~--~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 311 E--ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred h--hhhHHHHHHHHhcCHHHHHHHhh
Confidence 3 33445567778888888887765
No 89
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.79 E-value=4.5e-18 Score=190.87 Aligned_cols=240 Identities=15% Similarity=0.102 Sum_probs=165.9
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhcc-CCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRF-HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~-~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~ 260 (854)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 899999987777666666543 23456667786554332211 11235688887777655544
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCcc--cc
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMD--LF 338 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld--~~ 338 (854)
+.. .|+. ..++.++|+|||.+.+... .+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 1246678999997654311 01 013467899999996 45
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC--ChhhH
Q 003042 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL--STQDK 416 (854)
Q Consensus 339 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~--~~~el 416 (854)
||+..+++|+.++. + ++.|+++|. |++.++++ +++++ .+....+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l~----~~~~~-------~~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKCK----AYSRE-------LGIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHHH----HHHHH-------cCCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 456888873 34434443 34433 2333345566655 45899
Q ss_pred HHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEec-CccccccCC---CceEeCCCC
Q 003042 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCSPSLS---GAIRVNPWN 492 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~ai~vnP~d 492 (854)
..+|+.||++|+||..||||++++||||| |.|+|+|+ .+|+.+.+. .|++++|.|
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~---------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d 310 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY---------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGN 310 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc---------------------CCCEEEeCCCCChHHHccCCCceEEECCCC
Confidence 99999999999999999999999999999 45999999 888887773 389999999
Q ss_pred HHHHHHHHHHHhcCCH
Q 003042 493 VDAVADAMDSALQMEN 508 (854)
Q Consensus 493 ~~~~A~ai~~aL~m~~ 508 (854)
++++|++|.++++.++
T Consensus 311 ~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 311 IDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHHHhCcc
Confidence 9999999999998875
No 90
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.79 E-value=5.3e-18 Score=185.62 Aligned_cols=264 Identities=17% Similarity=0.122 Sum_probs=181.0
Q ss_pred HhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
+..+| |+|++|+.+...+...+..+. .++.+..|..++....... +....-..+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33566 899999888222222222221 4788889977654322110 110122334467888777765541110
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~ 344 (854)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 1112357789999998765321 12467789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCc
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~AD 424 (854)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+ .+..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKE-------LGLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHH-------cCCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988787754 777763 223233333 3333 234455666665 789999999999
Q ss_pred EEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C---CceEeCCCCHHHHHHHH
Q 003042 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S---GAIRVNPWNVDAVADAM 500 (854)
Q Consensus 425 v~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~ai~vnP~d~~~~A~ai 500 (854)
++++||..||||++++|||+| |.|+|+|+..|..+.+ . .|+++++.|+++++++|
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~---------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 313 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF---------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEAL 313 (348)
T ss_pred EEEeCccccccCHHHHHHHHc---------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHH
Confidence 999999999999999999999 4589999876655544 2 58999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhccccccChHHHHHHHH
Q 003042 501 DSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
.++++.++.. +...+..++.++++++..++++|.
T Consensus 314 ~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 314 LRLMEDEELR-KRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHcCHHHH-HHHHHHHHHHHHHhCHHHHHHHhc
Confidence 9999876544 344444477788899988888764
No 91
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.79 E-value=3.9e-17 Score=186.16 Aligned_cols=353 Identities=16% Similarity=0.182 Sum_probs=202.3
Q ss_pred cccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhc-CCCCCeEEEeCcccchHHHHHHhccCCCeEEEEe
Q 003042 143 KHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVI-NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFL 221 (854)
Q Consensus 143 ~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~-~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~fl 221 (854)
+.-||-.|+--.+. ....+++..-=.|.. ..|-....+.. ....|+++.||.+.-....+||++.++++..|+.
T Consensus 105 ~~~lW~~~~i~s~~---~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGSPE---GDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCCCC---CCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 34589888875432 223444433323321 22222222221 1124999999999999999999888999999999
Q ss_pred cCCCCChhhhhcCCChHHHHHHhhcCCeEeecCH--------------HHHHHHHHH-----HHhhhCccccccCceeeE
Q 003042 222 HSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTF--------------DYARHFLSS-----CSRMLGLNYESKRGYIGL 282 (854)
Q Consensus 222 H~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~--------------~~~~~Fl~~-----~~r~lg~~~~~~~~~~~i 282 (854)
|..- +-|.|- +.+ ..|++. -+.++.++. +.++..++...... ..
T Consensus 180 HAT~----~GR~l~----------~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~ 242 (590)
T cd03793 180 HATL----LGRYLC----------AGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AE 242 (590)
T ss_pred cccc----cccccc----------cCC-cccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HH
Confidence 9432 222210 000 111100 012222221 11111111000000 01
Q ss_pred EECCeEEEEEEeccccCchHHHhhhCC----chHHHHHHH-----HHHHc---CCCEEEEE-ecCccc-cCCHHHHHHHH
Q 003042 283 DYFGRTVSIKILPVGIHMGQFESIMSL----DVTGQKVKE-----LKEKF---DGKIVILG-VDDMDL-FKGISLKFLAM 348 (854)
Q Consensus 283 ~~~gr~~~i~v~p~GId~~~~~~~~~~----~~~~~~~~~-----l~~~~---~~~~iil~-VdRld~-~KGi~~~l~A~ 348 (854)
...++...+ |+|+|||++.|.+.... ....+++.+ ++.+| .+++++++ +||+++ .||++.+|+|+
T Consensus 243 ~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl 321 (590)
T cd03793 243 HLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEAL 321 (590)
T ss_pred HHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHH
Confidence 122333333 89999999998643211 011122222 35554 36788888 799999 99999999999
Q ss_pred HHHHHhCCC-CCCcEEEEEEecCCCCCh---------hHHHHHHHHHHHHHHHHhhc---------c-------------
Q 003042 349 GQLLEQHPD-LRGKVVLVQITNPARSSG---------KDVQDLLSDTNRIAEEINLN---------F------------- 396 (854)
Q Consensus 349 ~~ll~~~p~-~~~~vvLvqi~~p~r~~~---------~~~~~l~~~v~~~v~~In~~---------~------------- 396 (854)
.++-..-.. -.+..|+..+..|+...+ .-.+++++.+..+..+|+.+ .
T Consensus 322 ~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~ 401 (590)
T cd03793 322 ARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKV 401 (590)
T ss_pred HHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHH
Confidence 987542111 112234444444554331 22345666666666666555 1
Q ss_pred ----------------------------------------C-CCCCccEEEEcCCCC------hhhHHHHHHhCcEEEEc
Q 003042 397 ----------------------------------------G-KPGYEPIVIIKEPLS------TQDKVPYYAIAECCVVN 429 (854)
Q Consensus 397 ----------------------------------------~-~~~~~pv~~~~~~~~------~~el~aly~~ADv~vv~ 429 (854)
. ..+...|+|....++ ..+...+|+.||+||+|
T Consensus 402 ~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~P 481 (590)
T cd03793 402 MLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFP 481 (590)
T ss_pred HHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEec
Confidence 0 011223444443332 23578899999999999
Q ss_pred cCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc----ccCC----CceEeC-------CCCHH
Q 003042 430 CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSLS----GAIRVN-------PWNVD 494 (854)
Q Consensus 430 S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~ai~vn-------P~d~~ 494 (854)
|.+||||++++||||| |.|+|+|..+|.. +.+. .|+.|. +.+++
T Consensus 482 S~yE~fG~~~lEAma~---------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~ 540 (590)
T cd03793 482 SYYEPWGYTPAECTVM---------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQ 540 (590)
T ss_pred cccCCCCcHHHHHHHc---------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHH
Confidence 9999999999999999 4699999999984 3332 378887 45678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 495 AVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
++|++|.+.++++..++........+....+++.+-+..+++.-.
T Consensus 541 ~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 541 QLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999998877654443333333455566787777776665443
No 92
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.77 E-value=8.1e-18 Score=191.12 Aligned_cols=268 Identities=10% Similarity=0.066 Sum_probs=169.0
Q ss_pred HHhcCCCCCeEEEeCcccchH---HHHHHhccCCCeEEEEecCCCCChhhhhcCC--ChHHHHHHhhcCCeEeecCHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVL---PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYA 258 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~ll---p~~lr~~~~~~~i~~flH~pfP~~e~~~~lp--~r~eil~~ll~~dligf~t~~~~ 258 (854)
++..+| |+|++|+.-.+.. ...+++++ .. +..++|+.|+.+ ++... .....+... ...++
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y--~~~~~~g~~~~~l~~~---------~~~~~ 176 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEY--VKREKNGRVKAFLLKY---------INSWV 176 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHH--HHHhccchHHHHHHHH---------HHHHH
Confidence 345677 8999998776666 34555554 44 777999988543 22111 111212111 11223
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CC--CEEEEEecC
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DG--KIVILGVDD 334 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~iil~VdR 334 (854)
+.|. |..++..+....+ +.. .+.+.+.|||++.|..... . .++.+ .+ .+++++|||
T Consensus 177 ~r~~--~d~vi~pS~~~~~------l~~---~~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGR 236 (462)
T PLN02846 177 VDIY--CHKVIRLSAATQD------YPR---SIICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGK 236 (462)
T ss_pred HHHh--cCEEEccCHHHHH------Hhh---CEEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEec
Confidence 2221 4444433321110 001 1222357999988763221 0 11222 12 357999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
|.+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+.+ + +.. ++++.|..+.+
T Consensus 237 L~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~----l-------~l~-~~vf~G~~~~~ 295 (462)
T PLN02846 237 MVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEK----L-------ELD-VRVYPGRDHAD 295 (462)
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHh----c-------CCc-EEEECCCCCHH
Confidence 9999999999999999988888754 77666 66776666655443 2 222 44466654333
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCC
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPW 491 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~ 491 (854)
++|+.+||||+||.+||||+|.+||||| |.|+|+++..| .+.+. +|+.+ .
T Consensus 296 ---~~~~~~DvFv~pS~~Et~g~v~lEAmA~---------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~ 348 (462)
T PLN02846 296 ---PLFHDYKVFLNPSTTDVVCTTTAEALAM---------------------GKIVVCANHPS-NEFFKQFPNCRTY--D 348 (462)
T ss_pred ---HHHHhCCEEEECCCcccchHHHHHHHHc---------------------CCcEEEecCCC-cceeecCCceEec--C
Confidence 6899999999999999999999999999 45888888776 46562 35555 4
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 492 NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
|.++++++|.++|+.++.+...+ .+ ..+++..-+++|++.++-
T Consensus 349 ~~~~~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 349 DGKGFVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVADL 391 (462)
T ss_pred CHHHHHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhcc
Confidence 89999999999998654332211 11 368888888888776653
No 93
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.77 E-value=4.7e-18 Score=195.10 Aligned_cols=266 Identities=9% Similarity=0.050 Sum_probs=166.0
Q ss_pred HhcCCCCCeEEEeCcccchHH---HHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLP---SFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp---~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
...+| |+|++|..-.+... ....+++. ++...+||.||.+--+..+..-+.++. .++++|
T Consensus 431 ~~f~P--DVVHLatP~~LGw~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~ 493 (794)
T PLN02501 431 PSKDA--DIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNW 493 (794)
T ss_pred hccCC--CEEEECCchhhccHHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHH
Confidence 34566 89999986554444 23334443 699999999995433222222222111 123334
Q ss_pred HHH--HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCcc
Q 003042 262 LSS--CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMD 336 (854)
Q Consensus 262 l~~--~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld 336 (854)
+.. |.+++.++..... .. +. .|.. ..|||++.|.+... . ... .++ ...+.+++||||.
T Consensus 494 v~r~hcD~VIaPS~atq~------L~-~~-vI~n-VnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa 556 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD------LP-KS-VICN-VHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMV 556 (794)
T ss_pred HHHhhCCEEEcCCHHHHH------hc-cc-ceee-cccccccccCCcch---h----HHH-HhcCCccccCceEEEEccc
Confidence 333 6666654422111 11 11 1111 15999998864211 1 111 122 1224589999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhH
Q 003042 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (854)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el 416 (854)
+.||+..+|+|+..+.++.|+++ |+++| +|++.+++++.+. +.+ . .++|+. . .++.
T Consensus 557 ~EKGld~LLeAla~L~~~~pnvr----LvIVG-----DGP~reeLe~la~----eLg-------L-~V~FLG-~--~dd~ 612 (794)
T PLN02501 557 WAKGYRELIDLLAKHKNELDGFN----LDVFG-----NGEDAHEVQRAAK----RLD-------L-NLNFLK-G--RDHA 612 (794)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEc-----CCccHHHHHHHHH----HcC-------C-EEEecC-C--CCCH
Confidence 99999999999999988888654 77776 5565555554443 322 2 254444 3 3445
Q ss_pred HHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--CceEeCCCCH
Q 003042 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVNPWNV 493 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vnP~d~ 493 (854)
.++|+.+||||+||.+||||+|++||||| |.|+|+++..|.. .+ . ++++ +.|.
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~---------------------GlPVVATd~pG~e-~V~~g~nGll--~~D~ 668 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAM---------------------GKFVVCADHPSNE-FFRSFPNCLT--YKTS 668 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHc---------------------CCCEEEecCCCCc-eEeecCCeEe--cCCH
Confidence 68999999999999999999999999999 4599999988743 34 2 2333 4789
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 494 DAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
++++++|.++|..++.. ...+. ...+++..-++++++.-
T Consensus 669 EafAeAI~~LLsd~~~r--l~~~a----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 669 EDFVAKVKEALANEPQP--LTPEQ----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHHHHHHHHHHhCchhh--hHHHH----HhhCCHHHHHHHHHHhh
Confidence 99999999999987632 11111 22677777777776543
No 94
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.77 E-value=3.6e-17 Score=180.74 Aligned_cols=262 Identities=15% Similarity=0.155 Sum_probs=178.6
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
++++..+| |+|++|.+..+.++.+...+...+++.+++|-.++... ....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhcc---CCCEEEEeCHHHHHHH
Confidence 44455566 89999988655544443333446899999997654221 1111111 1288777776655555
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
... + ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 431 0 11246788999999887642110 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+..+.+ ++ +.|+++|... ......... +..+.+.+.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~----~~l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GD----IELVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cC----cEEEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHHH
Confidence 999999998866 44 4488777432 111111111 1123566777899999999999
Q ss_pred hCcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 422 IAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 422 ~ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
.||++++||. .||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~---------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~ 320 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAA---------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLA 320 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHC---------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHH
Confidence 9999999997 79999999999999 45999999988888773 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
++|.++++.++ .++...+..++.++. ..+++++++
T Consensus 321 ~~i~~l~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 321 AALERLIDDPD-LLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHHHhChH-HHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 99999998554 444444444444432 445554443
No 95
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.76 E-value=3.4e-17 Score=180.01 Aligned_cols=278 Identities=18% Similarity=0.134 Sum_probs=189.1
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcC-CChHHHH-HHhhcCCeEeecCHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL-PVRDEIL-KSLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~l-p~r~eil-~~ll~~dligf~t~~~~~~ 260 (854)
+++..+| |+|++|..+..++..++.+.....++.+..|...+........ .....+- ..+-.+|.+.+.+....+.
T Consensus 75 ~~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 152 (359)
T cd03808 75 LLRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHH
Confidence 3345566 8999998887777777766566677888888653321110000 0001111 1233578998888877776
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCC
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KG 340 (854)
+.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||
T Consensus 153 ~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 ALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred HHHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccC
Confidence 6541 000 01235667899999887642211 0 1246789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|++.+.+++|+++ |+.+|.... .+ ..... ++.+ .+..+.+.+.+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~-------~~~~~~v~~~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEK-------LGLEGRVEFLGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHh-------cCCcceEEEeec--cccHHHHH
Confidence 9999999999988777654 887775331 11 11111 1111 112234444444 67899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~---------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~ 320 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAM---------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALA 320 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHc---------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHH
Confidence 9999999999999999999999999 45999999999988873 38999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (854)
++|.+++..++.. ....+..+++ ...++...++++++
T Consensus 321 ~~i~~l~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 321 DAIERLIEDPELR-ARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHhCHHHH-HHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999988766544 3444445555 67789888888765
No 96
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.75 E-value=1e-17 Score=175.07 Aligned_cols=191 Identities=17% Similarity=0.198 Sum_probs=115.6
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCc---
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS--- 662 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~--- 662 (854)
+|++|+||||++ .+. ++++++++|+++ ++.|+.++++|||++..+..++..+. ..+++++||+.|..+...
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999999 443 556799999999 88999999999999999988886553 336899999999885421
Q ss_pred ------------ceEEccccccchHHHHHHHHHH-----HHhccCCcceEecccceEEEee------ccCCCccchhhHH
Q 003042 663 ------------AWEICSLTRDFDWKEIAEPVMK-----LYTETTDGSFIEDKETAIVWHH------QHADPHFGSCQAK 719 (854)
Q Consensus 663 ------------~~~~~~~~~~~~~~~~v~~~~~-----~y~~~~~g~~ie~k~~~l~~~~------~~~d~~~~~~~~~ 719 (854)
.+...++.. .+.+.++.+.+ .|...+. ... .....+.... +....-+... ..
T Consensus 76 ~~~~~~~~~~~~i~~~~l~~~--~~~~il~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ki~~~~-~~ 150 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKPVA--KIRAALKEAENEYGLKYYGNSTA-EEV-EKLTGLPRELAPLAKRREYSETIFLW-SR 150 (225)
T ss_pred cccccccCCCeEEEEcCCCHH--HHHHHHHHHHHhcCccchhcCCH-HHH-HHHHCcCHHHHHHHHhhhcCCcccCC-CH
Confidence 222222211 22222222111 1110000 000 0000000000 0000000000 11
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCC--CCCeEEEEeCCcccHHHHHHhhh
Q 003042 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGK--SPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 720 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi--~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+.+....+.+..+..++++ ++++|||.|++.+++.+ ++ +.+++++|||+.||++||+.+|.
T Consensus 151 e~~~~~~~~~~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 151 EGWEAILVTARARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHHHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 22223333333334455666666776 45999999999999988 65 56689999999999999999996
No 97
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.75 E-value=8.5e-17 Score=184.08 Aligned_cols=276 Identities=12% Similarity=0.049 Sum_probs=172.9
Q ss_pred CeEEEeCcccc--hHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChH---HH---HH-Hh-hcCCeEeecCHHHHHHH
Q 003042 192 DYVWIHDYHLM--VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---EI---LK-SL-LNSDLIGFHTFDYARHF 261 (854)
Q Consensus 192 D~vwihDyhl~--llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~---ei---l~-~l-l~~dligf~t~~~~~~F 261 (854)
|+|.+|..... .+...+..+..+.|+.+.+|.-+++..-.. .+... .+ ++ -+ -.||.|-..+....+.+
T Consensus 97 Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l 175 (415)
T cd03816 97 DYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDL 175 (415)
T ss_pred CEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHH
Confidence 99999974432 333444344457899999996543211010 11000 01 11 11 23676666655433332
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHH---------------H--cC
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKE---------------K--FD 324 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~---------------~--~~ 324 (854)
.+ ++....+|.++|+| +...|.+... .. ....+.+ . -+
T Consensus 176 ~~--------------------~~~~~~ki~vI~Ng-~~~~f~p~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 176 QQ--------------------FNNWKIRATVLYDR-PPEQFRPLPL---EE-KHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred Hh--------------------hhccCCCeeecCCC-CHHHceeCcH---HH-HHHHHHhccccccccccccccceecCC
Confidence 21 11123467789998 4456643211 11 1111111 0 12
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCC--CCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDL--RGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~--~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
+..+++++||+.+.||+..+++|+..+.+..++. ..++.|+++|. |++.+++++.++ + .+..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~~~l~~~~~----~-------~~l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLKEKYLERIK----E-------LKLK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccHHHHHHHHH----H-------cCCC
Confidence 3568889999999999999999999987642111 01355888873 444344444443 3 3455
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEEc---cCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVVN---CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv~---S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 479 (854)
.++++.+.++.+++..+|++||++|++ +..+||+++++||||| |.|+|+|...|..
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~---------------------G~PVI~s~~~~~~ 353 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC---------------------GLPVCALDFKCID 353 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc---------------------CCCEEEeCCCCHH
Confidence 688888889999999999999999864 3358899999999999 4599999998888
Q ss_pred ccCC---CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 480 PSLS---GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 480 ~~l~---~ai~vnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
+.+. +|++++ |++++|++|.++++++ +++++.+.+..+++.+ .+|.+.+.+
T Consensus 354 eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 354 ELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred HHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 8773 388884 8999999999999982 5566555666555543 445554443
No 98
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=5.8e-17 Score=180.14 Aligned_cols=260 Identities=16% Similarity=0.173 Sum_probs=173.7
Q ss_pred hcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHH-HHhhcCCeEeecCHHHHHHHHHH
Q 003042 186 VINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-KSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 186 ~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil-~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
..++ |+|++|+...+.....+... .+.+..+++|........+. .....+. ..+..+|.|-..+..+.+.+..
T Consensus 81 ~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~- 154 (357)
T cd03795 81 AKKA--DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV- 154 (357)
T ss_pred CCCC--CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-
Confidence 3455 89999986654333222222 46788889996432221111 1111122 2445688888887766655432
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~ 344 (854)
. .....++.++|+|+|...+..... .. ........++++|+++||+.+.||+..+
T Consensus 155 ---~----------------~~~~~~~~~i~~gi~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~l 209 (357)
T cd03795 155 ---L----------------RRFRDKVRVIPLGLDPARYPRPDA-----LE-EAIWRRAAGRPFFLFVGRLVYYKGLDVL 209 (357)
T ss_pred ---h----------------cCCccceEEecCCCChhhcCCcch-----hh-hHhhcCCCCCcEEEEecccccccCHHHH
Confidence 0 011135778999999887653211 00 1111112467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCc
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~AD 424 (854)
++|++++. ++.|+.+|. ++....+++ ++.+ .+..+-+.+.|.++.+++..+|+.||
T Consensus 210 i~a~~~l~--------~~~l~i~G~-----g~~~~~~~~----~~~~-------~~~~~~V~~~g~v~~~~~~~~~~~ad 265 (357)
T cd03795 210 LEAAAALP--------DAPLVIVGE-----GPLEAELEA----LAAA-------LGLLDRVRFLGRLDDEEKAALLAACD 265 (357)
T ss_pred HHHHHhcc--------CcEEEEEeC-----ChhHHHHHH----HHHh-------cCCcceEEEcCCCCHHHHHHHHHhCC
Confidence 99998773 455887773 233333333 3322 23445567788999999999999999
Q ss_pred EEEEccC--ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC----CceEeCCCCHHHHHH
Q 003042 425 CCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS----GAIRVNPWNVDAVAD 498 (854)
Q Consensus 425 v~vv~S~--~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~ai~vnP~d~~~~A~ 498 (854)
++++||. .||+|++++|||+| +.|+|+|+.+|..+.+. .|++++|.|++++++
T Consensus 266 ~~i~ps~~~~e~~g~~~~Ea~~~---------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~ 324 (357)
T cd03795 266 VFVFPSVERSEAFGIVLLEAMAF---------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAE 324 (357)
T ss_pred EEEeCCcccccccchHHHHHHHc---------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHH
Confidence 9999996 59999999999999 45999999888877663 378999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccc
Q 003042 499 AMDSALQMENQEKILRHEKHYKYI 522 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v 522 (854)
+|.+++++++. ++...+..++++
T Consensus 325 ~i~~l~~~~~~-~~~~~~~~~~~~ 347 (357)
T cd03795 325 AIRRLLEDPEL-RERLGEAARERA 347 (357)
T ss_pred HHHHHHHCHHH-HHHHHHHHHHHH
Confidence 99999987654 444444555554
No 99
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.74 E-value=5.5e-17 Score=170.55 Aligned_cols=191 Identities=14% Similarity=0.092 Sum_probs=128.0
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCcc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~~ 663 (854)
+|+||+||||||++ ++..+++.++++|++| ++.|+.|++||||+..++..+...+. ..++|++||+.|..+....
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~ 76 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYF 76 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccc
Confidence 48999999999999 7777889999999999 89999999999999999999887663 3378999999998774311
Q ss_pred ---------------eEEccccccchHHHHHHHHHHHHhccCCc--------------ceE------ecccceEEEeecc
Q 003042 664 ---------------WEICSLTRDFDWKEIAEPVMKLYTETTDG--------------SFI------EDKETAIVWHHQH 708 (854)
Q Consensus 664 ---------------~~~~~~~~~~~~~~~v~~~~~~y~~~~~g--------------~~i------e~k~~~l~~~~~~ 708 (854)
|.......-..|+..+..+...+.....| .-. ..++++-.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~ 156 (302)
T PRK12702 77 PAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYSG 156 (302)
T ss_pred cccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEecC
Confidence 00000111113444444443332211111 000 0112222222221
Q ss_pred CCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEee------------------C---CcchHHHHHHHHHHHhhCC
Q 003042 709 ADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKP------------------Q---GVSKGIVVKNLISTMRSRG 767 (854)
Q Consensus 709 ~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKg~al~~ll~~l~~~g 767 (854)
. ...+ .+.+....+.+..|..++.++. . +++||.|++.|.+.+....
T Consensus 157 ~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 157 D--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred C--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 1 1111 4445556677778887877776 5 8999999999999984332
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
..-.++++|||.||++|++++.+.
T Consensus 225 -~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 225 -GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred -CCceEEEecCChhhHHHHHhCCee
Confidence 334899999999999999999863
No 100
>PHA01630 putative group 1 glycosyl transferase
Probab=99.74 E-value=4.9e-17 Score=179.66 Aligned_cols=186 Identities=15% Similarity=0.091 Sum_probs=137.4
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 369 (854)
++.++|+|||++.|.+... ...++.++++++|+.+.||+..+|+|++++.+++|+++ |+.+|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 5778999999887742210 01245567778899999999999999999988877654 777772
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCC
Q 003042 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (854)
Q Consensus 370 p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~ 449 (854)
. .. +. ++. + + .+ +.+.++.+++..+|+.||+||+||..||||++++|||||
T Consensus 182 ~-----~~--~~--~l~------~--~--~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~---- 232 (331)
T PHA01630 182 N-----ML--DP--RLF------G--L--NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL---- 232 (331)
T ss_pred c-----cc--ch--hhc------c--c--cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----
Confidence 1 11 11 110 0 0 11 234588999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCceEEEecCccccccCCC-----------------------ceEeCCCCHHHHHHHHHHHhcC
Q 003042 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG-----------------------AIRVNPWNVDAVADAMDSALQM 506 (854)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----------------------ai~vnP~d~~~~A~ai~~aL~m 506 (854)
|.|+|+|..+|..+.+.+ |++++| |.+++++++.++|..
T Consensus 233 -----------------G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 233 -----------------GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALAN 294 (331)
T ss_pred -----------------CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhC
Confidence 459999998887877632 444455 788899999999987
Q ss_pred C--HHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 507 E--NQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 507 ~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
+ ++.++...+....+.+++++...++++++-++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 295 WTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4 44444444455556788999999999988765
No 101
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.73 E-value=1.3e-16 Score=174.70 Aligned_cols=247 Identities=21% Similarity=0.174 Sum_probs=166.7
Q ss_pred HhcCCCCCeEEEeCc-ccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHH
Q 003042 185 EVINPDEDYVWIHDY-HLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 185 ~~~~~~~D~vwihDy-hl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 263 (854)
...++ |+|++|++ ...++.. +..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLAL-LAARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHH-HHhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33466 89999988 4444444 44444 7899999998876432211 111112334456788888877766655543
Q ss_pred HHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHH
Q 003042 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISL 343 (854)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~ 343 (854)
.. + ....++.++|+|+|...+...... .. ......++.+++++||+++.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----PL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccch-----hh--hcCCCCCceEEEEEecchhhcChHH
Confidence 21 0 013467889999998876532110 00 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC
Q 003042 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (854)
Q Consensus 344 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A 423 (854)
+++|+..+.+++++++ |+.+|. ++...+++ +++.+. +..+.+.+.+. .+++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGD-----GPLREELE----ALAKEL-------GLADRVHFLGF--QSNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcC-----CccHHHHH----HHHHhc-------CCCccEEEecc--cCCHHHHHHhC
Confidence 9999999988776654 777774 22323333 333332 23344455555 35788999999
Q ss_pred cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHH
Q 003042 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAM 500 (854)
Q Consensus 424 Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai 500 (854)
|+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|.+++++++
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~---------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~ 323 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMAL---------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAA 323 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHh---------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHH
Confidence 9999999999999999999999 45999999998888773 48999999999995444
Q ss_pred HHHhc
Q 003042 501 DSALQ 505 (854)
Q Consensus 501 ~~aL~ 505 (854)
..+..
T Consensus 324 ~~i~~ 328 (353)
T cd03811 324 LALLD 328 (353)
T ss_pred HHHHh
Confidence 44433
No 102
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.72 E-value=4.7e-16 Score=176.99 Aligned_cols=190 Identities=16% Similarity=0.158 Sum_probs=135.4
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCCHHHHH----HHHHHHHHhCCCCCCcEEE
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLKF----LAMGQLLEQHPDLRGKVVL 364 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KGi~~~l----~A~~~ll~~~p~~~~~vvL 364 (854)
++.++|+|||.+.|.+....+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 577889999998885321100 111 3567899999999999999887 56667777888766 8
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccC-ccCCCCcceeee
Q 003042 365 VQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYT 443 (854)
Q Consensus 365 vqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~-~EG~~Lv~~Ea~ 443 (854)
+++|.. +. . +++++. . .+-+.+.|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~g-----~~-~----~~~~l~----~-------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGAK-----PS-P----AVRALA----A-------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECCC-----Ch-H----HHHHhc----c-------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 877742 22 1 222221 1 12234566665 78999999999999996 599999999999
Q ss_pred eeecCCCccccccCCCCCCCCCCCceEEEecCcccccc-C-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q 003042 444 VSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-L-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (854)
Q Consensus 444 a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (854)
+| |.|+|+|..++.... . ..++++. .|++++|++|.+++++++ .++...++.+++
T Consensus 320 a~---------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~-~~~~~~~~ar~~ 376 (397)
T TIGR03087 320 AM---------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLANPA-EREELGQAARRR 376 (397)
T ss_pred Hc---------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHH
Confidence 99 458888876432111 1 2478885 899999999999998654 455566666777
Q ss_pred c-cccChHHHHHHHHHHHH
Q 003042 522 I-SSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 522 v-~~~~~~~W~~~~l~~l~ 539 (854)
+ .++++...++++.+-+.
T Consensus 377 v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 377 VLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHhCCHHHHHHHHHHHhc
Confidence 6 56899999988876553
No 103
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.72 E-value=4.1e-16 Score=173.85 Aligned_cols=267 Identities=14% Similarity=0.049 Sum_probs=172.3
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHH-----HhhcCCeEeecCHHHHHHHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-----SLLNSDLIGFHTFDYARHFLSSCS 266 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~-----~ll~~dligf~t~~~~~~Fl~~~~ 266 (854)
|+++||.......+.....+..+.++.+.+|..-.....+.. ....+++ .+..+|.|-..+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 566666555443332222222367899988852111111110 1111221 344678888877654444322
Q ss_pred hhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccccCCHHHH
Q 003042 267 RMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 267 r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~ 344 (854)
. + +... .++|+|+|...+.. ....++.+ .+++.++++||+.+.||+..+
T Consensus 161 -~---------------~-~~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -K---------------Y-GRDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -h---------------c-CCCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 1 1111 67899999876532 01112222 345678899999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCc
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~AD 424 (854)
++|+.++.. ++.|+++|... ...++.+.+.+ + . +..+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~---~----~---~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE---K----A---AADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH---H----h---CCCCcEEEccccChHHHHHHHHhCC
Confidence 999987632 35588888532 11233333332 1 1 1224556778899999999999999
Q ss_pred EEEEccCc-cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHH
Q 003042 425 CCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDS 502 (854)
Q Consensus 425 v~vv~S~~-EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~ 502 (854)
++++||.. ||||++++|||+| |.|+|+|..+|..+.+ .++..++|.|. +|++|.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~---------------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAY---------------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHc---------------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 99999999 9999999999999 4599999998887777 45888888776 9999999
Q ss_pred HhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHH
Q 003042 503 ALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 503 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 538 (854)
++..++..++ ..+..++.+ ..+++..-++++++.+
T Consensus 327 l~~~~~~~~~-~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 327 LEADPEEVSA-MAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9998754443 344445555 4589888888887654
No 104
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.71 E-value=5.8e-16 Score=170.83 Aligned_cols=248 Identities=14% Similarity=0.056 Sum_probs=166.0
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFL 262 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 262 (854)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .....+...+.+-+-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3444556 8999999887776 2 334578899999987653211 123333344444333332222111
Q ss_pred HHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHH
Q 003042 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGIS 342 (854)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~ 342 (854)
.. .++.++|+|||++.|... ..++.+++++||+.+.||+.
T Consensus 148 -----------------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 -----------------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred -----------------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 00 357789999999887520 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHh
Q 003042 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (854)
Q Consensus 343 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ 422 (854)
.+++|+.+ +++ .|+++|... ....+...+.+.. . ..+.+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~~----~l~i~G~~~-----~~~~~~~~~~~~~----~------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGI----PLKLAGPVS-----DPDYFYREIAPEL----L------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCC----eEEEEeCCC-----CHHHHHHHHHHhc----c------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 343 477777432 1122222222210 0 1134556778999999999999
Q ss_pred CcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHH
Q 003042 423 AECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD 498 (854)
Q Consensus 423 ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 498 (854)
||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+. .|+++++ ++++++
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~---------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~ 300 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC---------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAA 300 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc---------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHH
Confidence 999999997 59999999999999 45999999999888883 3788887 999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 499 AMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
+|.+++.++.... + .....++++..-++++++-
T Consensus 301 ~l~~l~~~~~~~~--~----~~~~~~~s~~~~~~~~~~~ 333 (335)
T cd03802 301 AVARADRLDRAAC--R----RRAERRFSAARMVDDYLAL 333 (335)
T ss_pred HHHHHhccHHHHH--H----HHHHHhCCHHHHHHHHHHH
Confidence 9999876543211 1 1122557877777776653
No 105
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.71 E-value=3.6e-16 Score=174.61 Aligned_cols=245 Identities=18% Similarity=0.167 Sum_probs=162.1
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC----Chhhh-hcCCC-------------hHHHHHHhhcCCeEee
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP----SSEIY-RTLPV-------------RDEILKSLLNSDLIGF 252 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP----~~e~~-~~lp~-------------r~eil~~ll~~dligf 252 (854)
-|+|+++.. .+....+ +.++.+..+++|.|.+ ..+.+ ...+. +.-..+.+..+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 388877643 2222222 4557888889998632 11111 11110 0111223456788877
Q ss_pred cCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEe
Q 003042 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGV 332 (854)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~V 332 (854)
.+....+.+.+. . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 777666555331 1 11 234678999987764210 234579999
Q ss_pred cCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCC
Q 003042 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (854)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~ 412 (854)
||+.+.||+..+++|++++ | ++ |+++|. +++.+++++ . ..+.+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~---------~~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------K---------AGPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------h---------cCCCEEEecCCC
Confidence 9999999999999999765 3 33 777773 333333332 0 012345667899
Q ss_pred hhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--CceEeC
Q 003042 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVN 489 (854)
Q Consensus 413 ~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vn 489 (854)
.+++.++|+.||++++||. ||||++++|||+| |.|+|+|..+|..+.+ + .|++++
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~---------------------G~Pvi~~~~~~~~e~i~~~~~G~~~~ 309 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMAS---------------------GTPVIAYGKGGALETVIDGVTGILFE 309 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc---------------------CCCEEEeCCCCCcceeeCCCCEEEeC
Confidence 9999999999999999999 9999999999999 4599999998888777 2 489999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
|.|++++|++|.+++++++..+ +.+.+...++++.+..++
T Consensus 310 ~~~~~~la~~i~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 310 EQTVESLAAAVERFEKNEDFDP----QAIRAHAERFSESRFREK 349 (351)
T ss_pred CCCHHHHHHHHHHHHhCcccCH----HHHHHHHHhcCHHHHHHH
Confidence 9999999999999998874222 222333344555555543
No 106
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.70 E-value=4.5e-16 Score=173.53 Aligned_cols=195 Identities=16% Similarity=0.158 Sum_probs=141.6
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccc--cCCHHHHHHHHHHHHHh-CCCCCCcE
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL--FKGISLKFLAMGQLLEQ-HPDLRGKV 362 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~--~KGi~~~l~A~~~ll~~-~p~~~~~v 362 (854)
.++.++|+|||...+... .. ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~-----~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPR-----DK---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCC-----cH---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 367889999998877421 11 1223333 35566666666654 89999999999988665 34 45
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCC-hhhHHHHHHhCcEEEEccCccCCCCccee
Q 003042 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS-TQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (854)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~-~~el~aly~~ADv~vv~S~~EG~~Lv~~E 441 (854)
.++.+|... .... . +....+.+.+.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 577777432 1000 0 0112345566777 78999999999999999999999999999
Q ss_pred eeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003042 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKH 518 (854)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 518 (854)
||+| +.|+|+|..+|..+.+. .|+++++.|++++|++|.+++..++ ++....++.
T Consensus 284 am~~---------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~ 341 (365)
T cd03825 284 ALAC---------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAA 341 (365)
T ss_pred HHhc---------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHH
Confidence 9999 45999999988888773 4899999999999999999997664 444445555
Q ss_pred hccc-cccChHHHHHHHHHHHHH
Q 003042 519 YKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 519 ~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
++++ ..+++..+++++++-+++
T Consensus 342 ~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 342 RELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhh
Confidence 5655 458999999888876543
No 107
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.69 E-value=4e-17 Score=172.89 Aligned_cols=193 Identities=21% Similarity=0.354 Sum_probs=119.8
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--c-ccceeecCcEEEEECCC
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--E-KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~-~l~liaenG~~I~~~~~ 661 (854)
.++|++|+||||++ .+..-..+..+.++.. ..+++.++++|||+...+.+.+... + .-.+++.+|..|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~~~-~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLEQQ-ARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHHHH-HCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHHHh-hCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 58999999999993 2222334555555523 5899999999999999999887643 1 2357899999988832
Q ss_pred cceEEccccccchHHHH---------HHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003042 662 SAWEICSLTRDFDWKEI---------AEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE 732 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~---------v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 732 (854)
.|.. +..|.+. +.+++..+..-.+....+...+.+.+.+...+. ...++.|+..+...
T Consensus 77 -~~~~-----d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQP-----DEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQR 143 (247)
T ss_dssp -TTEE------HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCC
T ss_pred -CCcC-----hHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHc
Confidence 2221 1123322 223333332211111112223344444433211 12345555555444
Q ss_pred C---EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe
Q 003042 733 P---VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV 809 (854)
Q Consensus 733 ~---~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v 809 (854)
. ..+.++...++|.|++++||.|+++|++++ ++++++++++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 3 234567889999999999999999999999 999999999999999999995443 47888
Q ss_pred cCC
Q 003042 810 GQK 812 (854)
Q Consensus 810 G~~ 812 (854)
|+.
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 875
No 108
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.67 E-value=5.1e-15 Score=170.09 Aligned_cols=275 Identities=15% Similarity=0.174 Sum_probs=171.3
Q ss_pred HHHHHHHhcCCCCCeEEEeCcccchHHHHHHh-ccCCCeEEEEecCCCC-ChhhhhcCCChHHHHHHhh-cCCeEeecCH
Q 003042 179 FADKVMEVINPDEDYVWIHDYHLMVLPSFLRK-RFHRVKVGFFLHSPFP-SSEIYRTLPVRDEILKSLL-NSDLIGFHTF 255 (854)
Q Consensus 179 fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~-~~~~~~i~~flH~pfP-~~e~~~~lp~r~eil~~ll-~~dligf~t~ 255 (854)
...++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+ +...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 34445677788 89999988765 555533 3346777776664333 22333322 23333333 4799999998
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecC
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDD 334 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdR 334 (854)
...+.|.+ +|+. .. +.++|++ +.+.+. .+........+++.+ +++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~~~~~vil~~~~ 241 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLAPNRPVWIAAST 241 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 88877754 2321 11 3344542 222111 011112234566666 67888999987
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH-HHHHHHHHHHHHHHhhccC-CCC-C----ccEEEE
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDV-QDLLSDTNRIAEEINLNFG-KPG-Y----EPIVII 407 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~-~~l~~~v~~~v~~In~~~~-~~~-~----~pv~~~ 407 (854)
. .|+...+++||.++++++|+++ |+++| ++++. ++++ +++.+.+-.+. ..+ . ...+++
T Consensus 242 ~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~----~~~~~~gl~~~~~~~~~~~~~~~~v~l 306 (425)
T PRK05749 242 H--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVE----ELLKKAGLSYVRRSQGEPPSADTDVLL 306 (425)
T ss_pred C--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHH----HHHHhCCCcEEEccCCCCCCCCCcEEE
Confidence 5 5889999999999998899765 77665 34442 3344 33333221110 000 0 012333
Q ss_pred cCCCChhhHHHHHHhCcEEEE-ccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc----ccC
Q 003042 408 KEPLSTQDKVPYYAIAECCVV-NCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSL 482 (854)
Q Consensus 408 ~~~~~~~el~aly~~ADv~vv-~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l 482 (854)
.+ +..|+..+|+.||++++ +|+.||+|++++|||+| |.|+|++...|.. +.+
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~---------------------G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF---------------------GVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh---------------------CCCEEECCCccCHHHHHHHH
Confidence 33 25799999999999666 68889999999999999 4588887654433 222
Q ss_pred -CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 483 -SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 483 -~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
.+|.++.|.|++++|++|.++++.+ +.+....++.++++.++
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhC
Confidence 4578888999999999999999755 45555666667777655
No 109
>PLN02275 transferase, transferring glycosyl groups
Probab=99.67 E-value=1.8e-15 Score=170.63 Aligned_cols=239 Identities=10% Similarity=-0.009 Sum_probs=157.1
Q ss_pred cCCCCCeEEEeCcccch--HHHHHHhccCCCeEEEEecCCCCChhhhhc-C---C----ChHHHHHHh-hcCCeEeecCH
Q 003042 187 INPDEDYVWIHDYHLMV--LPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-L---P----VRDEILKSL-LNSDLIGFHTF 255 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~l--lp~~lr~~~~~~~i~~flH~pfP~~e~~~~-l---p----~r~eil~~l-l~~dligf~t~ 255 (854)
.+| |+|++|..+.+. +++.+-.+..++|+.+.+|..+.+ .+.. . + ....+-+.+ -.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 456 899999877532 344444444568899999975421 1110 0 0 011111222 23677777776
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM 335 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl 335 (854)
...+...+. .|.. +.++|+|+ .+.|.+... . ..++ ...+.+++++||+
T Consensus 175 ~~~~~l~~~--------------------~g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQN--------------------WGIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHHh--------------------cCCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 555543320 0111 56788884 455542211 0 0111 1245678899999
Q ss_pred cccCCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 003042 336 DLFKGISLKFLAMGQLLE-----------------QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (854)
Q Consensus 336 d~~KGi~~~l~A~~~ll~-----------------~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~ 398 (854)
.+.||+..+++|+..+.. ++|+ +.|+++| +|++.+++++.+++
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~----------- 282 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISR----------- 282 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHH-----------
Confidence 999999999999988753 2454 5588887 44554555554443
Q ss_pred CCCccEEEEcCCCChhhHHHHHHhCcEEEEcc---CccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC
Q 003042 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC---VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475 (854)
Q Consensus 399 ~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S---~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 475 (854)
.+...++++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||| |.|+|+|..
T Consensus 283 ~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~---------------------G~PVVa~~~ 341 (371)
T PLN02275 283 LNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC---------------------GLPVCAVSY 341 (371)
T ss_pred cCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC---------------------CCCEEEecC
Confidence 34455777887889999999999999999853 248999999999999 459999998
Q ss_pred ccccccCC---CceEeCCCCHHHHHHHHHHHh
Q 003042 476 IGCSPSLS---GAIRVNPWNVDAVADAMDSAL 504 (854)
Q Consensus 476 ~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL 504 (854)
+|..+.+. .|++++ |++++|++|.++|
T Consensus 342 gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 342 SCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 88888773 388886 6999999998865
No 110
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.65 E-value=9.1e-15 Score=166.42 Aligned_cols=294 Identities=20% Similarity=0.194 Sum_probs=199.9
Q ss_pred CeEEEeCcccchHHHHHHhc---cCCCeEEEEecCC-----CCChhhh--hcCCC------------hHHHHH-HhhcCC
Q 003042 192 DYVWIHDYHLMVLPSFLRKR---FHRVKVGFFLHSP-----FPSSEIY--RTLPV------------RDEILK-SLLNSD 248 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~---~~~~~i~~flH~p-----fP~~e~~--~~lp~------------r~eil~-~ll~~d 248 (854)
|||++||+|.-|+|.++++. ...++..|+.|-= |+ ...+ -.||. .-..++ |+..+|
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~-~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFR-LQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccc-hhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 99999999999999999997 7789999999932 23 2222 23441 112333 577788
Q ss_pred eEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCC-----------chHHHHHH
Q 003042 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKVK 317 (854)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~ 317 (854)
.|.--++.|++.-...--.. |+. | .+.+ +.-++.-+-+|||.....+.... +...+...
T Consensus 211 ~vttVSptYa~Ei~t~~~g~-gl~-----g--~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYTPEYGE-GLE-----G--LLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhccccccc-cch-----h--hhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 88888888877654100000 000 0 0111 11344555667776654322110 01122234
Q ss_pred HHHHHc--C---CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 003042 318 ELKEKF--D---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (854)
Q Consensus 318 ~l~~~~--~---~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~I 392 (854)
.+++.+ . +.+++..|+|++..||++.+++|+..++++. ++ ||.+|.+ -..++..+..++.++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhc
Confidence 455555 2 4689999999999999999999999999987 44 7777743 135677777787776
Q ss_pred hhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE
Q 003042 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (854)
Q Consensus 393 n~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (854)
..++ .+.-..+..--..+|+.||++++||..|++||+-+++|.- |+++|+
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry---------------------GtvpIv 397 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY---------------------GTLPIV 397 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc---------------------CCcceE
Confidence 5433 2333345556668999999999999999999999999997 569999
Q ss_pred ecCccccccCC----------C-ceEeCCCCHHHHHHHHHHHhcC---CHH-HHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 473 SEFIGCSPSLS----------G-AIRVNPWNVDAVADAMDSALQM---ENQ-EKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 473 Se~~G~~~~l~----------~-ai~vnP~d~~~~A~ai~~aL~m---~~~-er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
.+.+|.++.+. + |+++.|.+.++++.||.+|+.. ++. -+..+..+|. ..+++..-+++++.-
T Consensus 398 ~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~l 474 (487)
T COG0297 398 RETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVEL 474 (487)
T ss_pred cccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHH
Confidence 99999998883 2 7889888999999999999875 333 3333333333 467777777777766
Q ss_pred HHHHH
Q 003042 538 LERAC 542 (854)
Q Consensus 538 l~~~~ 542 (854)
.+.+.
T Consensus 475 Y~~~~ 479 (487)
T COG0297 475 YKPLL 479 (487)
T ss_pred HHHHh
Confidence 55543
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.61 E-value=2.5e-15 Score=149.96 Aligned_cols=144 Identities=22% Similarity=0.316 Sum_probs=111.5
Q ss_pred CCCEEEEEecCccccCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ-HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
.++++|+++||+++.||+..+++|++.+.++ .+++ .|+.+|. ++....++.. +... +..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~-----~~~~~~~~~~----~~~~-------~~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGD-----GEYKKELKNL----IEKL-------NLK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESH-----CCHHHHHHHH----HHHT-------TCG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEcc-----cccccccccc----cccc-------ccc
Confidence 5789999999999999999999999999875 6654 4777772 2222333333 3332 222
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~---------------------g~pvI~~~~~~~~e~~ 131 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC---------------------GCPVIASDIGGNNEII 131 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT---------------------T-EEEEESSTHHHHHS
T ss_pred ccccccccccccccccccccceecccccccccccccccccccc---------------------ccceeeccccCCceee
Confidence 2233445677899999999999999999999999999999999 5699999988887777
Q ss_pred C---CceEeCCCCHHHHHHHHHHHhcCCH
Q 003042 483 S---GAIRVNPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 483 ~---~ai~vnP~d~~~~A~ai~~aL~m~~ 508 (854)
. .|+++++.|+++++++|.+++.+++
T Consensus 132 ~~~~~g~~~~~~~~~~l~~~i~~~l~~~~ 160 (172)
T PF00534_consen 132 NDGVNGFLFDPNDIEELADAIEKLLNDPE 160 (172)
T ss_dssp GTTTSEEEESTTSHHHHHHHHHHHHHHHH
T ss_pred ccccceEEeCCCCHHHHHHHHHHHHCCHH
Confidence 3 2699999999999999999999873
No 112
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.54 E-value=3.8e-13 Score=151.90 Aligned_cols=267 Identities=12% Similarity=0.099 Sum_probs=168.4
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh-HHHHHHhhcCCeEeecCHHHHHHHHHHH
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-DEILKSLLNSDLIGFHTFDYARHFLSSC 265 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r-~eil~~ll~~dligf~t~~~~~~Fl~~~ 265 (854)
++.++.++|.+..-...+... .+..++.+-+|..|+...... +.. ...-+.+-.||+|-..+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457899875555444444 456788888887665432110 111 11222345689988777765543321
Q ss_pred HhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHH
Q 003042 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (854)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l 345 (854)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|++++.+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 1 1 356789999999999643221110 0111 114678999999999977664 33
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcE
Q 003042 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (854)
Q Consensus 346 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv 425 (854)
. .+.+.+|+++ |++||... .. .+. .++ ... +-+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~---~~--~~~-~~~-------------~~~-~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD---VS--IDP-SAL-------------LRL-PNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc---Cc--cCh-hHh-------------ccC-CCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678875 88777431 00 011 000 011 23455678999999999999999
Q ss_pred EEEccC-----ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHH
Q 003042 426 CVVNCV-----RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAM 500 (854)
Q Consensus 426 ~vv~S~-----~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai 500 (854)
+++|+. ++++++..+||||| |.|+|+|...++.+. .++..+.+.|.++++++|
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~---------------------G~PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai 334 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAA---------------------GKPVVATPLPEVRRY-EDEVVLIADDPEEFVAAI 334 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhcc---------------------CCCEEecCcHHHHhh-cCcEEEeCCCHHHHHHHH
Confidence 999986 35789999999999 348888876554433 334455567999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 501 DSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
.++|..+..++..+.. +.+.+||+..-+++++..|..
T Consensus 335 ~~~l~~~~~~~~~~~~---~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 335 EKALLEDGPARERRRL---RLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHhcCCchHHHHHH---HHHHHCCHHHHHHHHHHHHHh
Confidence 9988655433332221 267889999999888866653
No 113
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.46 E-value=1.3e-13 Score=145.38 Aligned_cols=188 Identities=15% Similarity=0.190 Sum_probs=142.3
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCCHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISL 343 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KGi~~ 343 (854)
..|...+++.++.+.+ +.-.-..-++.++|+-++...|.+.... +. .+...|+.++||-+.||+++
T Consensus 146 id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDl 212 (426)
T KOG1111|consen 146 IDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDL 212 (426)
T ss_pred CCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHH
Confidence 3455566777666543 3333344588999999999999753221 22 34588999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC
Q 003042 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (854)
Q Consensus 344 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A 423 (854)
++..+.++-++||+.+ ++++| +||....+++.+++. ..+..+-+.|.++++++...|...
T Consensus 213 l~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~~G 272 (426)
T KOG1111|consen 213 LLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLVRG 272 (426)
T ss_pred HHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHhcC
Confidence 9999999999999987 77666 666555555555442 122344466689999999999999
Q ss_pred cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCc-eEeCCCCHHHHHHHHHH
Q 003042 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGA-IRVNPWNVDAVADAMDS 502 (854)
Q Consensus 424 Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-i~vnP~d~~~~A~ai~~ 502 (854)
|+|+.||+.|.|+++..||+.| |-++|.+..+|..+.|... +..-+-.++++++++.+
T Consensus 273 ~IFlntSlTEafc~~ivEAaSc---------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ 331 (426)
T KOG1111|consen 273 DIFLNTSLTEAFCMVIVEAASC---------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEK 331 (426)
T ss_pred cEEeccHHHHHHHHHHHHHHhC---------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHH
Confidence 9999999999999999999999 3477777788878888544 44556678999999888
Q ss_pred HhcC
Q 003042 503 ALQM 506 (854)
Q Consensus 503 aL~m 506 (854)
+++.
T Consensus 332 ai~~ 335 (426)
T KOG1111|consen 332 AITK 335 (426)
T ss_pred HHHH
Confidence 8763
No 114
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.46 E-value=3.7e-13 Score=132.71 Aligned_cols=200 Identities=21% Similarity=0.284 Sum_probs=121.9
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--cccceeecCcEEEEECC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKLGLSAEHGYFTRWSK 660 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~l~liaenG~~I~~~~ 660 (854)
.++++||+|+||||++++ .+..+ ....+.+| .+.|..|++||..+..++..+-..+ +.+++++|||+.|+-+.
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye~~p---A~pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YEWQP---AAPVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccCCC-CCCCc---cchHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 467999999999999922 23333 34556666 6779999999999999988876654 56899999999998764
Q ss_pred CcceEEcc--c-----cccc-------hHHHHHHHHHHHHhccC-----CcceEe-----cccceEEEeeccCCCccchh
Q 003042 661 NSAWEICS--L-----TRDF-------DWKEIAEPVMKLYTETT-----DGSFIE-----DKETAIVWHHQHADPHFGSC 716 (854)
Q Consensus 661 ~~~~~~~~--~-----~~~~-------~~~~~v~~~~~~y~~~~-----~g~~ie-----~k~~~l~~~~~~~d~~~~~~ 716 (854)
+ |...- . .... .+.+....+-+.|--.+ .....+ .....++. -++.......+
T Consensus 80 ~--~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~-~rEyseti~~r 156 (274)
T COG3769 80 G--WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAM-LREYSETIIWR 156 (274)
T ss_pred c--ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHH-HHHhhhheeec
Confidence 3 22110 0 0000 11122212212221100 000000 00000000 00000000011
Q ss_pred hHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 717 QAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 717 ~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
..++...++...+...++.++.|..+..+......||.|++.+++.+...+.. .-++.+||+.||.+||+....
T Consensus 157 s~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~-r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 157 SSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGA-RTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred ccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCce-eEEEecCCCCCcccHHHhhhh
Confidence 12344556666777778889999999999998999999999999987443322 259999999999999999875
No 115
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.42 E-value=2.5e-11 Score=137.52 Aligned_cols=191 Identities=14% Similarity=0.138 Sum_probs=123.8
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCHHHHHHHHHHHHHh----CCCCCCcE
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ----HPDLRGKV 362 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi~~~l~A~~~ll~~----~p~~~~~v 362 (854)
+|.+++++|+...+... + ....+++++ +++++|+.+||....||+...++++..++.. .|+.
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~---- 242 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG---- 242 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCc----
Confidence 45667888886433211 1 123456666 4688999999999999999999999876522 2332
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceee
Q 003042 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKY 442 (854)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea 442 (854)
.++.+++ +++ ++++++++... + ..+. +.|.+ +++..+|++||++|.+| .++++.||
T Consensus 243 ~~~vi~G----~~~---~~~~~L~~~~~------~----~~v~-~~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 243 QVVVICG----RNK---KLQSKLESRDW------K----IPVK-VRGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred eEEEEEC----CCH---HHHHHHHhhcc------c----CCeE-EEecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 2333442 222 23333332200 0 1233 55555 47999999999999866 37899999
Q ss_pred eeeecCCCccccccCCCCCCCCCCCceEEEecCc-----cccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003042 443 TVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-----GCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516 (854)
Q Consensus 443 ~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~ 516 (854)
|+| +.|+|++... |-.+.+ +++.-+.+.|+++++++|.++|.++++.++.+.+
T Consensus 299 ma~---------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~ 357 (382)
T PLN02605 299 LIR---------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSE 357 (382)
T ss_pred HHc---------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 999 4589998853 323333 3433444689999999999999874556666667
Q ss_pred HHhccccccChHHHHHHHHH
Q 003042 517 KHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~ 536 (854)
..+++...+....-++.+++
T Consensus 358 ~~~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 358 NALKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHHHhcCCchHHHHHHHHHH
Confidence 77777777776666655443
No 116
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.35 E-value=2e-11 Score=137.19 Aligned_cols=185 Identities=12% Similarity=0.097 Sum_probs=141.3
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCC-cEEEEEEecC-CCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRG-KVVLVQITNP-ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 326 ~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~-~vvLvqi~~p-~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
..++..+.|+.|-||+...|.||..+...-|+..- ...++..+++ +.+...+..++..++.+++++-+ .+ ..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-l~-----g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-LL-----GQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-cc-----Cc
Confidence 67899999999999999999999999888765221 2444545533 33444555566777777777732 12 23
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL- 482 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 482 (854)
.++|....++.+.+.+++.+.+..+++..|.||+|++|||+| +-|+|++..+|..|.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~---------------------glPvvAt~~GGP~EiV~ 405 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC---------------------GLPVVATNNGGPAEIVV 405 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc---------------------CCCEEEecCCCceEEEE
Confidence 667766788888888888888899999999999999999999 4599999999999998
Q ss_pred --CCceEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHHHHHH
Q 003042 483 --SGAIRVNPWNVD---AVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLE 539 (854)
Q Consensus 483 --~~ai~vnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~ 539 (854)
..|++++| +.+ .+|++|.++.+.|+. +....+..++.|.+ ++++...+++..-+.
T Consensus 406 ~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 406 HGVTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred cCCcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 34999999 666 599999999988876 66666777777776 787555555555444
No 117
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.25 E-value=7.5e-10 Score=120.10 Aligned_cols=198 Identities=22% Similarity=0.288 Sum_probs=141.6
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHH-cCC--CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEK-FDG--KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
.+.+.|.|+++..+... +.. ..+ +.+++++||+.+.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56778999999877532 000 112 36899999999999999999999999877765 44666
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
+|..... ...+.. ++.+.+. .+.+.+.+.++.+++..+|+.||+++.||..||+|++.+|||+|
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 6643211 122222 3333221 23444577788889999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCCC---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH-HHhccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG---AIRVNPWNVDAVADAMDSALQMENQEKILRHE-KHYKYI 522 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~-~~~~~v 522 (854)
+.|+|+|...|..+.+.. |+++++.|.+++++++..++++++ .++...+ ......
T Consensus 300 --------------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~ 358 (381)
T COG0438 300 --------------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPE-LREELGEAARERVE 358 (381)
T ss_pred --------------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHH
Confidence 358899999988888843 778888889999999999998883 3333332 233333
Q ss_pred cccChHHHHHHHHHHHHHH
Q 003042 523 SSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 523 ~~~~~~~W~~~~l~~l~~~ 541 (854)
..+++..-++.+.+-+...
T Consensus 359 ~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 359 EEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HhcCHHHHHHHHHHHHHHH
Confidence 5678777776666655544
No 118
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.25 E-value=2.1e-10 Score=118.20 Aligned_cols=111 Identities=20% Similarity=0.204 Sum_probs=80.7
Q ss_pred EecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCC
Q 003042 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (854)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~ 410 (854)
++||+.+.||+...++|+..+.+++|+++ ++.+|... . .+ ..+..+.. .+ ....+.++. .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~--~-~~--~~~~~~~~--------~~--~~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP--E-RE--YLEELLAA--------LL--LLDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC--C-hH--HHHHHHHh--------cC--CcccEEEeC-C
Confidence 99999999999999999999988887654 88887532 1 11 11111111 11 112344444 4
Q ss_pred C-ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 411 L-STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 411 ~-~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
+ +.+++..+++.||+++.||..||++.+++|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~---------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC---------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC---------------------CCCEEEcCCCCcceEE
Confidence 4 5566667777799999999999999999999999 4599999998877755
No 119
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.19 E-value=4.1e-09 Score=119.30 Aligned_cols=274 Identities=11% Similarity=0.098 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEe
Q 003042 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIG 251 (854)
Q Consensus 172 Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dlig 251 (854)
+...+..-..++++..+| |+|.+| +....++.+.++...++++....+...+.. ..+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~---------~~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHK---------IWVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCc---------ccccC---CCCEEE
Confidence 333444445667777788 898885 666677877766666677653332111110 01111 588887
Q ss_pred ecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCch-HHHhhhCCchHHHHHHHHHHHc---CCCE
Q 003042 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMG-QFESIMSLDVTGQKVKELKEKF---DGKI 327 (854)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~~ 327 (854)
..+....+.+.+ .|+. ..++.++ |++.. .|... .+ ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 777654444332 1221 1123333 33332 23211 11 12245555 2444
Q ss_pred -EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEE
Q 003042 328 -VILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (854)
Q Consensus 328 -iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~ 406 (854)
+++..|++...||+...++++. +.|++ .++.+++. +++ +++++++++.+. + ..|++
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~----~~~~~----~~viv~G~---~~~----~~~~l~~~~~~~----~----~~v~~ 260 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLM----SVPDL----QVVVVCGK---NEA----LKQSLEDLQETN----P----DALKV 260 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHh----hCCCc----EEEEEeCC---CHH----HHHHHHHHHhcC----C----CcEEE
Confidence 5666799999999998888864 23544 36666532 122 333444443321 1 23555
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-cccc----cc
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCS----PS 481 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~----~~ 481 (854)
+ +.+ +++..+|+.||++|. ++.|+++.|||+| +.|+|++.. .|.. ..
T Consensus 261 ~-g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~---------------------g~PvI~~~~~~g~~~~n~~~ 312 (380)
T PRK13609 261 F-GYV--ENIDELFRVTSCMIT----KPGGITLSEAAAL---------------------GVPVILYKPVPGQEKENAMY 312 (380)
T ss_pred E-ech--hhHHHHHHhccEEEe----CCCchHHHHHHHh---------------------CCCEEECCCCCCcchHHHHH
Confidence 4 554 468899999999874 4458999999999 347888763 3321 11
Q ss_pred C-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 482 L-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 482 l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
+ ..|..+.+.|.++++++|.++++.++ .+..+.+..+++...++....++.+++.+...
T Consensus 313 ~~~~G~~~~~~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 313 FERKGAAVVIRDDEEVFAKTEALLQDDM-KLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHhCCcEEEECCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 2 23445556899999999999998654 44445556666777788888888887766544
No 120
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.16 E-value=2e-09 Score=120.03 Aligned_cols=249 Identities=14% Similarity=0.128 Sum_probs=148.9
Q ss_pred HHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHH
Q 003042 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYAR 259 (854)
Q Consensus 180 a~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 259 (854)
+.++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . +.++. ..+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~~--~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLLA--RFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHHH--HhhCEEEEcchhhhh
Confidence 3345566677 8999986544 34445555555777877666555421 0 11111 125666665543222
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCcc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMD 336 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld 336 (854)
. + ...++.++|+|+|.+.+... + . ++++ .++++|+.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11356778999998766421 1 0 2333 4677888888888
Q ss_pred ccCCHHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhh
Q 003042 337 LFKGISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (854)
Q Consensus 337 ~~KGi~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~e 415 (854)
..|+...++ .|++.+. + ++ +.++.+++ ++ +.+++++.++++ + ..++ +.+.+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~~~~~~--------~----~~v~-~~g~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKKAYEEL--------G----VNYE-VFPFI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHHHHhcc--------C----CCeE-Eeehh--hh
Confidence 888877654 7776663 2 22 33333332 22 234444433221 1 1144 44443 79
Q ss_pred HHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----c----cccC---CC
Q 003042 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----C----SPSL---SG 484 (854)
Q Consensus 416 l~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~ 484 (854)
+..+|+.||++|.+| | +.+++|||+|+ -|+|++...| + ++.+ ..
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G---------------------~Pvv~~~~~~~~~~~~~~~~~~l~~~g~ 300 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALG---------------------LPAILIPLPYAADDHQTANARALVKAGA 300 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhC---------------------CCEEEeecCCCCCCcHHHhHHHHHhCCC
Confidence 999999999999876 3 57899999993 4777765443 1 2333 23
Q ss_pred ceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHH
Q 003042 485 AIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (854)
Q Consensus 485 ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 529 (854)
|+++++. |.++++++|.+++.. ++.++...++.++++..+...+
T Consensus 301 g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 301 AVLIPQEELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEEEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHH
Confidence 7899887 899999999999965 4455555556666666555444
No 121
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.15 E-value=3.9e-09 Score=118.81 Aligned_cols=253 Identities=15% Similarity=0.147 Sum_probs=146.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh--cCCeEeecC
Q 003042 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHT 254 (854)
Q Consensus 177 ~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll--~~dligf~t 254 (854)
..|++. ++..+| |+|.+|......+.+.+-.+..++|+...-+-- -+...+. |+.+++.+-+. -+|++--.+
T Consensus 76 ~~l~~~-l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEEL-LLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHH-HHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 455554 455677 999999655555555554444567876432211 0111111 22233323222 267766677
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcC-CCEEE-EEe
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD-GKIVI-LGV 332 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ii-l~V 332 (854)
....+++++ +|++ ..+|.++++|+....+..... + ....+++++. ++.++ +..
T Consensus 150 ~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-~----~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-A----YSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-c----cchhHHHhcCCCCCEEEEec
Confidence 776666653 1322 236778888863222221111 0 1123444553 23444 444
Q ss_pred cCcc-ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC
Q 003042 333 DDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (854)
Q Consensus 333 dRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~ 411 (854)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.++ ...++ . ...+ .+.+.+
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~---~~~~~----~--~~~v-~~~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREPL---HKHLG----D--SKRV-HLIEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHHH---HHHhC----C--CCCE-EEECCC
Confidence 4653 45999999999999998888764 55554332 11 11111 12211 1 1234 455678
Q ss_pred ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe-cCccccccC-CC-ceEe
Q 003042 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSL-SG-AIRV 488 (854)
Q Consensus 412 ~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-ai~v 488 (854)
+..++..+|+.||+++.+| |.+..|||+|+ .|+|++ ..+|..+.+ .+ ++++
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g---------------------~PvI~~~~~~~~~e~~~~g~~~lv 317 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLG---------------------KPVLVLRDTTERPETVEAGTNKLV 317 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcC---------------------CCEEECCCCCCChHHHhcCceEEe
Confidence 8999999999999999888 44579999993 477775 445544444 23 4566
Q ss_pred CCCCHHHHHHHHHHHhcCCH
Q 003042 489 NPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~ 508 (854)
|.|+++++++|.+++..++
T Consensus 318 -~~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 318 -GTDKENITKAAKRLLTDPD 336 (365)
T ss_pred -CCCHHHHHHHHHHHHhChH
Confidence 6799999999999998653
No 122
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.14 E-value=1.8e-09 Score=121.00 Aligned_cols=258 Identities=14% Similarity=0.082 Sum_probs=158.0
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
++++..+| |+|..|.....+ +..+..+..+.|+.++.|..+|.. .+.++- -.+|.+-..+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSG-PGGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchh-HHHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 34556677 999999855433 344545566788888777555431 011111 1244443333210 0
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
. . ....++.++|+|+|.+.+.. +.. ...+ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 12246788999999876542 110 0111 111367888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 342 SLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 342 ~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
...+ +|++++.+. | .+++++|. ++. +++.+.+ . . +.. +. +.+.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~--------~-~---~~~-v~-~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAY--------A-A---GIN-AE-VVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHh--------h-c---CCc-EE-EeehH--hhHHHHH
Confidence 7776 888777432 2 34555553 221 2332221 1 1 122 33 44544 6899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc--------cccC---CCceEeC
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--------SPSL---SGAIRVN 489 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~ai~vn 489 (854)
+.||+++.+| | +.+.+|||+|+ -|+|++-..|. ++.+ ..|++++
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g---------------------~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~ 305 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAG---------------------LPAILVPLPHAADDHQTANARALVDAGAALLIP 305 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhC---------------------CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEE
Confidence 9999999877 3 57899999993 47777654321 2233 3378888
Q ss_pred CCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 490 PWN--VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 490 P~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
|.| +++++++|.+++.++ +.++...+..+++..+.+...-++.+++.+.
T Consensus 306 ~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 306 QSDLTPEKLAEKLLELLSDP-ERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred cccCCHHHHHHHHHHHHcCH-HHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 888 999999999999875 4555566666777888888888887776553
No 123
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.09 E-value=9.6e-09 Score=115.29 Aligned_cols=254 Identities=15% Similarity=0.081 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecC--CCCChhhhhcCCCh--HHHHHHhhcCCe
Q 003042 174 SANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHS--PFPSSEIYRTLPVR--DEILKSLLNSDL 249 (854)
Q Consensus 174 ~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~--pfP~~e~~~~lp~r--~eil~~ll~~dl 249 (854)
.....+.+.+.+. +| |+|++|.+....++..+..+..++|+..+.|- +|- +..|+. ...+.. .+|.
T Consensus 75 ~~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~--~ad~ 144 (363)
T cd03786 75 GLLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAIDK--LSDL 144 (363)
T ss_pred HHHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHHH--Hhhh
Confidence 3444555555554 77 89999988777777666666667888765542 120 001111 111111 3566
Q ss_pred EeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEecccc-CchHHHhhhCCchHHHHHHHHHHHc---CC
Q 003042 250 IGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKF---DG 325 (854)
Q Consensus 250 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~ 325 (854)
+-.-+....+++.+ .| ....+|.++++++ |...+..... + ....++.+ .+
T Consensus 145 ~~~~s~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~ 198 (363)
T cd03786 145 HFAPTEEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPK 198 (363)
T ss_pred ccCCCHHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCC
Confidence 55555444444332 12 1233566777764 5443321111 0 01111222 24
Q ss_pred CEEEEEecCccc---cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 326 KIVILGVDDMDL---FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 326 ~~iil~VdRld~---~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
+.+++.++|+.. .||+..+++|++++.+. ++.++..+. ++....+++. +.+.+.. .
T Consensus 199 ~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~~----~~~~~~~------~ 257 (363)
T cd03786 199 KYILVTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPRIREA----GLEFLGH------H 257 (363)
T ss_pred CEEEEEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHHHHHH----HHhhccC------C
Confidence 557788999875 79999999999887542 233444332 2222334333 3332210 1
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
+.+.+.+....+++..+|+.||++|.+|- | +..|+++|+ .|+|++...+..+++
T Consensus 258 ~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g---------------------~PvI~~~~~~~~~~~ 311 (363)
T cd03786 258 PNVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLG---------------------VPVLNLRDRTERPET 311 (363)
T ss_pred CCEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcC---------------------CCEEeeCCCCccchh
Confidence 23345555678899999999999999994 4 468999983 478887665645444
Q ss_pred -CCceEeCC-CCHHHHHHHHHHHhcCCHHH
Q 003042 483 -SGAIRVNP-WNVDAVADAMDSALQMENQE 510 (854)
Q Consensus 483 -~~ai~vnP-~d~~~~A~ai~~aL~m~~~e 510 (854)
..|+.+.+ .|.++++++|.++++.+...
T Consensus 312 ~~~g~~~~~~~~~~~i~~~i~~ll~~~~~~ 341 (363)
T cd03786 312 VESGTNVLVGTDPEAILAAIEKLLSDEFAY 341 (363)
T ss_pred hheeeEEecCCCHHHHHHHHHHHhcCchhh
Confidence 44544433 37999999999999876543
No 124
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.08 E-value=4.9e-09 Score=116.88 Aligned_cols=180 Identities=14% Similarity=0.099 Sum_probs=115.5
Q ss_pred EEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCCHHHH-HHHHHHHHHhCCCCCCcEEEEEEec
Q 003042 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLK-FLAMGQLLEQHPDLRGKVVLVQITN 369 (854)
Q Consensus 292 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KGi~~~-l~A~~~ll~~~p~~~~~vvLvqi~~ 369 (854)
.++|+|+|...+... + . ..++ .. +++++|+++||....|++... +.|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655321 0 0 1111 12 467889999998888987654 4788777542 222 333432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCC
Q 003042 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (854)
Q Consensus 370 p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~ 449 (854)
+++. +++++. +.+ .+...++.+. ..++..+|+.||++|.+| | +.+.+|||+|
T Consensus 218 ----~~~~-~~l~~~----~~~-------~~l~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~---- 269 (348)
T TIGR01133 218 ----KNDL-EKVKNV----YQE-------LGIEAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAA---- 269 (348)
T ss_pred ----cchH-HHHHHH----Hhh-------CCceEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHc----
Confidence 2222 333333 322 2223344444 228899999999999865 4 6899999999
Q ss_pred CccccccCCCCCCCCCCCceEEEecCcccc-------ccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHH
Q 003042 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCS-------PSL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEK 517 (854)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~ai~vnP~d--~~~~A~ai~~aL~m~~~er~~r~~~ 517 (854)
+.|+|++...|.. +.+ ..|++++|.| +++++++|.++++.+ +.++.+.+.
T Consensus 270 -----------------g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~ 331 (348)
T TIGR01133 270 -----------------GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP-ANLEAMAEA 331 (348)
T ss_pred -----------------CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCH-HHHHHHHHH
Confidence 3488887765532 233 3488898876 999999999999754 455566677
Q ss_pred HhccccccChHHHHH
Q 003042 518 HYKYISSHDVAYWAK 532 (854)
Q Consensus 518 ~~~~v~~~~~~~W~~ 532 (854)
.++++..+...++++
T Consensus 332 ~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 332 ARKLAKPDAAKRIAE 346 (348)
T ss_pred HHhcCCccHHHHHHh
Confidence 778887777666654
No 125
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.08 E-value=1.1e-08 Score=116.37 Aligned_cols=271 Identities=10% Similarity=0.075 Sum_probs=154.9
Q ss_pred HHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHH
Q 003042 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYAR 259 (854)
Q Consensus 180 a~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 259 (854)
..++++..+| |+|.++ +...++..+.+++..++|+. +.++-|-....| +- -.+|.+-..+....+
T Consensus 96 l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~~~~w--------~~---~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 96 LINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRLHKNW--------IT---PYSTRYYVATKETKQ 160 (391)
T ss_pred HHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCccccc--------cc---CCCCEEEECCHHHHH
Confidence 4455566788 888886 22233333333444467774 344444111111 00 147887777655444
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCC-EEEEEecCc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGK-IVILGVDDM 335 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~-~iil~VdRl 335 (854)
.+.+ .|+. ..+|.+.++.|+. .|.... + ...+++++ +++ .+++++||+
T Consensus 161 ~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~l 212 (391)
T PRK13608 161 DFID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAF 212 (391)
T ss_pred HHHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCc
Confidence 4432 1221 1233444555553 332111 1 12333444 234 466789999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhh
Q 003042 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (854)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~e 415 (854)
...||+..+++++ ++..|+++ ++.+++ .++ ++.+++.+. .+. . ..++ +.|.+ ++
T Consensus 213 g~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v~-~~G~~--~~ 266 (391)
T PRK13608 213 GVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENVL-ILGYT--KH 266 (391)
T ss_pred ccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCeE-EEecc--ch
Confidence 9999999999885 34445543 655553 222 222232221 111 1 1243 44554 57
Q ss_pred HHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC------CCceEeC
Q 003042 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL------SGAIRVN 489 (854)
Q Consensus 416 l~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~ai~vn 489 (854)
+..+|+.||++|.. +.|++..|||+|+ .|+|++...+..+.. +.|.-+-
T Consensus 267 ~~~~~~~aDl~I~k----~gg~tl~EA~a~G---------------------~PvI~~~~~pgqe~~N~~~~~~~G~g~~ 321 (391)
T PRK13608 267 MNEWMASSQLMITK----PGGITISEGLARC---------------------IPMIFLNPAPGQELENALYFEEKGFGKI 321 (391)
T ss_pred HHHHHHhhhEEEeC----CchHHHHHHHHhC---------------------CCEEECCCCCCcchhHHHHHHhCCcEEE
Confidence 99999999999863 4588999999993 488887543322221 2233333
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHhc
Q 003042 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (854)
+.|.++++++|.++++.+ +++..+.+..++....++....++.+++.+...++.+
T Consensus 322 ~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 322 ADTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred eCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 669999999999999865 4555566667777778888888888887776655443
No 126
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.01 E-value=4.5e-10 Score=110.45 Aligned_cols=72 Identities=22% Similarity=0.234 Sum_probs=58.2
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC--CCcccceEeCCH--hH-
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ--KPSMAKYYLDDT--AE- 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~--~~s~A~y~l~~~--~e- 825 (854)
+|..+++.+++++ |++++++++|||+.||++|++.+|.+ ++|..+. .+..|+|++.++ ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~------------~~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS------------VAVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe------------EecCCcCHHHHHhCCEEecCCCCCcH
Confidence 3889999999999 99999999999999999999999873 4444443 256789998765 33
Q ss_pred HHHHHHHHHhcc
Q 003042 826 VINLLEGLATES 837 (854)
Q Consensus 826 V~~~L~~l~~~~ 837 (854)
+.++++.+..+.
T Consensus 141 ~~~~~~~~~~~~ 152 (154)
T TIGR01670 141 VREVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHHHhh
Confidence 888888887654
No 127
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.99 E-value=6.4e-10 Score=112.60 Aligned_cols=124 Identities=23% Similarity=0.313 Sum_probs=88.8
Q ss_pred cCCeEEEEecCCCCCCCC----CCCCCCCHHHH---HHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 583 TNSRLILLDYDGTVMPQT----SEDKRPSTEVL---SILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~----~~~~~is~~~~---~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
..+|+|++|+||||++.. .....+...+. .+++.| ++.|+.++|+|||+...+..+++. +++..
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~---lgl~~----- 89 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTT---LGITH----- 89 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHH---cCCce-----
Confidence 359999999999999821 01333433333 688888 778999999999988777766632 11100
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEE
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 735 (854)
+ |.
T Consensus 90 --------------------------------------~-----------f~---------------------------- 92 (183)
T PRK09484 90 --------------------------------------L-----------YQ---------------------------- 92 (183)
T ss_pred --------------------------------------e-----------ec----------------------------
Confidence 0 00
Q ss_pred EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---
Q 003042 736 VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--- 812 (854)
Q Consensus 736 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--- 812 (854)
+ .-+|+.+++.+++.+ |++++++++|||+.||++|++.+|.. +.+++.
T Consensus 93 ---g---------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~~ 143 (183)
T PRK09484 93 ---G---------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPL 143 (183)
T ss_pred ---C---------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhHH
Confidence 0 113678999999999 99999999999999999999999973 334543
Q ss_pred -CcccceEeC
Q 003042 813 -PSMAKYYLD 821 (854)
Q Consensus 813 -~s~A~y~l~ 821 (854)
...|+|++.
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 356889886
No 128
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.93 E-value=1.8e-07 Score=110.73 Aligned_cols=181 Identities=11% Similarity=0.109 Sum_probs=123.4
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
+..++..|.|+...||+.+.+.+++++++ ++|+. .+.+|..|...-.+.. -.++.+.+.+++.+ -.+. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 55689999999999999999999999986 55552 4777777754322211 13444555554432 0121 1
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEE-ccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccc
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVV-NCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv-~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (854)
.|+++.+ .+..--..+|++||+++. ||. .|.-|+.-+-||.- |.|..|-.-|...
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n----------------------GgL~~sv~DG~~~ 515 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN----------------------GVLNLSILDGWWG 515 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc----------------------CCceeecccCccc
Confidence 3666664 444444578999999999 777 89999988777773 6677777777655
Q ss_pred cC---CCceEeCC------------CCHHHHHHHHHHHh-c----C-----CHHHHHHHHHHHhccccccChHHHHHHHH
Q 003042 481 SL---SGAIRVNP------------WNVDAVADAMDSAL-Q----M-----ENQEKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 481 ~l---~~ai~vnP------------~d~~~~A~ai~~aL-~----m-----~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
+. .+|+.+.+ .|.+++-++|.+++ . . |..-.+.+.+.|......+++.+.++++.
T Consensus 516 E~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~ 595 (601)
T TIGR02094 516 EGYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYV 595 (601)
T ss_pred ccCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 54 24788875 89999999998887 2 2 22233445555555555689888888876
Q ss_pred HH
Q 003042 536 QD 537 (854)
Q Consensus 536 ~~ 537 (854)
..
T Consensus 596 ~~ 597 (601)
T TIGR02094 596 DK 597 (601)
T ss_pred HH
Confidence 54
No 129
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.89 E-value=2.9e-08 Score=104.75 Aligned_cols=315 Identities=15% Similarity=0.230 Sum_probs=189.5
Q ss_pred ChhcHHHHHHHHHHHHHHHHHh-----cCCCCCeEEEeCccc-chHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChH
Q 003042 165 DRGEWQAYLSANKVFADKVMEV-----INPDEDYVWIHDYHL-MVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD 238 (854)
Q Consensus 165 ~~~~w~~Y~~vN~~fa~~i~~~-----~~~~~D~vwihDyhl-~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~ 238 (854)
+...|..+.-.-|..+..|+.. ..|+ |||-.--. .-.|.+-| +.++|+|-+.|-|--|.+....+-.|+
T Consensus 122 ea~~~~hfTllgQaigsmIl~~Eai~r~~Pd---i~IDtMGY~fs~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq 196 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMILAFEAIIRFPPD---IFIDTMGYPFSYPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQ 196 (465)
T ss_pred ecccccceehHHHHHHHHHHHHHHHHhCCch---heEecCCCcchhHHHHH--HccCceEEEEecccccHHHHHHHHhhh
Confidence 3445666666666666555431 2353 78853221 22344433 668999999997765666655443332
Q ss_pred HHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCcc-------ccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCch
Q 003042 239 EILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLN-------YESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDV 311 (854)
Q Consensus 239 eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~-------~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~ 311 (854)
+- + +...---.|-|-|..--.- .|.- ..=.+.+|.--+..+++++ |+|+. +++.+.+...+
T Consensus 197 ~s--~-----~l~~~KlaY~rlFa~lY~~-~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t-- 264 (465)
T KOG1387|consen 197 KS--G-----ILVWGKLAYWRLFALLYQS-AGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT-- 264 (465)
T ss_pred hc--c-----hhhhHHHHHHHHHHHHHHh-ccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc--
Confidence 11 1 1111223455555321111 1210 0000112211233333333 44433 33333322111
Q ss_pred HHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 003042 312 TGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD--LRGKVVLVQITNPARSSGKDVQDLLSDTNRIA 389 (854)
Q Consensus 312 ~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~--~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v 389 (854)
.-+....+|+++.+-|.|+.. .|+-+...+.+.|. .-.++.|+++|+ .|+ ++-++.-+.++.++
T Consensus 265 ----------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a 330 (465)
T KOG1387|consen 265 ----------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLA 330 (465)
T ss_pred ----------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHH
Confidence 012456899999999999999 77777778888887 334677887775 333 23334455566666
Q ss_pred HHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCce
Q 003042 390 EEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSV 469 (854)
Q Consensus 390 ~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~ 469 (854)
.+++ .+..+-|.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||+ |.
T Consensus 331 ~~L~-------i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA----------------------Gl 381 (465)
T KOG1387|consen 331 EELK-------IPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA----------------------GL 381 (465)
T ss_pred HhcC-------CccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc----------------------Cc
Confidence 6644 223355666899999999999999999999999999999999998 33
Q ss_pred EEEecCcc-cc-ccC---C---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 470 IIVSEFIG-CS-PSL---S---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 470 lV~Se~~G-~~-~~l---~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
+.++..+| .. ..+ . .|++. | +.++-|++|.+++++..+||....+..+..+.+++-+..-++|.+.+...
T Consensus 382 Ipi~h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 382 IPIVHNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eEEEeCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 33333333 21 111 1 25665 3 57889999999999999998887777787787787777777777655544
No 130
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.88 E-value=7.2e-08 Score=109.04 Aligned_cols=141 Identities=17% Similarity=0.213 Sum_probs=91.2
Q ss_pred HHHHcC---CCEE-EEEe-cCccccCC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 003042 319 LKEKFD---GKIV-ILGV-DDMDLFKG-ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (854)
Q Consensus 319 l~~~~~---~~~i-il~V-dRld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~I 392 (854)
+++++. ++++ ++.. +|....|+ +...++|++.+.+++|+++ +++++. +++..+++++ ++.+
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~~~----~~~~- 242 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQIEE----ALAE- 242 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHHHH----HHhh-
Confidence 444442 4444 3433 47766544 6889999999988888654 666653 1222233333 3322
Q ss_pred hhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE
Q 003042 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (854)
Q Consensus 393 n~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (854)
++ +.. +.++. .++..+|+.||++|.+| |.+.+|+|+|+ .|+|+
T Consensus 243 ---~~--~~~-v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G---------------------~PvI~ 285 (380)
T PRK00025 243 ---YA--GLE-VTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK---------------------VPMVV 285 (380)
T ss_pred ---cC--CCC-eEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC---------------------CCEEE
Confidence 10 111 33333 47899999999999998 67788999993 47777
Q ss_pred e-----------------cCccccccCCC-----ceEeCCCCHHHHHHHHHHHhcCCHH
Q 003042 473 S-----------------EFIGCSPSLSG-----AIRVNPWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 473 S-----------------e~~G~~~~l~~-----ai~vnP~d~~~~A~ai~~aL~m~~~ 509 (854)
+ .+.|..+.+.+ +++++..|++++++++.++|+.++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 344 (380)
T PRK00025 286 GYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGAR 344 (380)
T ss_pred EEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHH
Confidence 6 34444555532 3677888999999999999987653
No 131
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.85 E-value=4.9e-09 Score=100.11 Aligned_cols=128 Identities=19% Similarity=0.258 Sum_probs=88.0
Q ss_pred CEEEEEecCccccCCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 326 KIVILGVDDMDLFKGISLKFL-AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 326 ~~iil~VdRld~~KGi~~~l~-A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
..+|++.|++.+.||+..+++ |++++.+++|+++ |+.+|... + + +.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh-cC----------CCE
Confidence 357899999999999999999 9999999999654 88777522 2 1 2211 00 124
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (854)
.+ .+.+ +|+.++|+.||+++.|+. .+|++...+|||++ |.|+|+|.. |+...+.
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~---------------------G~pvi~~~~-~~~~~~~ 110 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA---------------------GKPVIASDN-GAEGIVE 110 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT---------------------T--EEEEHH-HCHCHS-
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh---------------------CCCEEECCc-chhhhee
Confidence 44 4455 689999999999999985 78999999999999 458888888 6655552
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhc
Q 003042 484 ---GAIRVNPWNVDAVADAMDSALQ 505 (854)
Q Consensus 484 ---~ai~vnP~d~~~~A~ai~~aL~ 505 (854)
.++.+ +.|.++++++|.+++.
T Consensus 111 ~~~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 111 EDGCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp --SEEEE--TT-HHHHHHHHHHHHH
T ss_pred ecCCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999875
No 132
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.83 E-value=2.5e-09 Score=111.09 Aligned_cols=68 Identities=15% Similarity=0.220 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTA 824 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~ 824 (854)
.|...++++++++ |.+++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 4788999999999 99999999999999999999999973 578888853 235889999999
Q ss_pred HHHHHHHH
Q 003042 825 EVINLLEG 832 (854)
Q Consensus 825 eV~~~L~~ 832 (854)
++.+++..
T Consensus 205 ~l~~~i~~ 212 (214)
T PRK13288 205 DLLAIVGD 212 (214)
T ss_pred HHHHHHhh
Confidence 99888754
No 133
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.81 E-value=4.4e-09 Score=109.79 Aligned_cols=84 Identities=23% Similarity=0.263 Sum_probs=66.6
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
.++..+..+.....-+| +...+..+++.+ |.+++++++|||+.+|+.|.+++|. .+++|++|
T Consensus 130 ~~F~~i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g 191 (220)
T COG0546 130 DYFDVIVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWG 191 (220)
T ss_pred cccceEEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECC
Confidence 44444445455555555 778889999998 8888899999999999999999996 35899998
Q ss_pred CC------CcccceEeCCHhHHHHHHHH
Q 003042 811 QK------PSMAKYYLDDTAEVINLLEG 832 (854)
Q Consensus 811 ~~------~s~A~y~l~~~~eV~~~L~~ 832 (854)
.. ...|+++++++.++...|..
T Consensus 192 ~~~~~~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 192 YNSREELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred CCCCcchhhcCCCEEECCHHHHHHHHhc
Confidence 63 35799999999999888753
No 134
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.80 E-value=9.5e-08 Score=104.93 Aligned_cols=65 Identities=18% Similarity=0.172 Sum_probs=54.1
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeC--CHh
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLD--DTA 824 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~--~~~ 824 (854)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 9999999999999999999999996 4566333 478999987 466
Q ss_pred HHHHHHH
Q 003042 825 EVINLLE 831 (854)
Q Consensus 825 eV~~~L~ 831 (854)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7776664
No 135
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.78 E-value=1.1e-07 Score=92.90 Aligned_cols=221 Identities=19% Similarity=0.273 Sum_probs=144.8
Q ss_pred HHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC-C-ccc-ceeecCcEE
Q 003042 579 AYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V-EKL-GLSAEHGYF 655 (854)
Q Consensus 579 ~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~-~~l-~liaenG~~ 655 (854)
++++...-|+.||.||||++ ....+++++.+.|+.| .+...+.++-|-....+.+-++. + ... ...+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l--r~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL--RKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH--hhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 55677778999999999999 8899999999999998 46788889999888777766643 1 222 345799988
Q ss_pred EEECCCcceEEc-cccc-cchHHHHHHHHHHHHhc----cCCcceEecccceEEEee--ccCCCc----cc-----hhhH
Q 003042 656 TRWSKNSAWEIC-SLTR-DFDWKEIAEPVMKLYTE----TTDGSFIEDKETAIVWHH--QHADPH----FG-----SCQA 718 (854)
Q Consensus 656 I~~~~~~~~~~~-~~~~-~~~~~~~v~~~~~~y~~----~~~g~~ie~k~~~l~~~~--~~~d~~----~~-----~~~~ 718 (854)
-+..|...-... .... +..+++.+.-.+.+..+ ..-|.++|-++..+.... +++..+ |. ..-.
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 777665321111 0000 11122333323333332 245889988877666542 222211 11 1112
Q ss_pred HHHHHHHHHHhcCCCEE-EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhc
Q 003042 719 KELLDHLENVLANEPVV-VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAV 793 (854)
Q Consensus 719 ~el~~~l~~~l~~~~~~-v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~ 793 (854)
+.+.+.|++.+.++.+. .+.|.-.++|.|.|++|-.-++++-+. ..+.+.+||| +.||.+.|..-..
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dprt-- 231 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADPRT-- 231 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCCcc--
Confidence 34667788888877654 467788999999999998877776543 3689999999 6899998865432
Q ss_pred CCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHH
Q 003042 794 ADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 794 ~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
++-+ +.+|++..+.++.+.
T Consensus 232 -----------iGhs-----------V~~PdDT~~~~~~if 250 (252)
T KOG3189|consen 232 -----------IGHS-----------VTSPDDTVRICEEIF 250 (252)
T ss_pred -----------cccc-----------ccCchHHHHHHHHHh
Confidence 2333 446777777776654
No 136
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.77 E-value=1e-07 Score=96.51 Aligned_cols=193 Identities=19% Similarity=0.286 Sum_probs=127.2
Q ss_pred HHHHHHHcccCCCCeEEEEcCCCccchhhhhc-C-C-cc-cceeecCcEEEEECCCcceEEcccc-cc-chHHHHHHHHH
Q 003042 610 VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS-G-V-EK-LGLSAEHGYFTRWSKNSAWEICSLT-RD-FDWKEIAEPVM 683 (854)
Q Consensus 610 ~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~-~-~-~~-l~liaenG~~I~~~~~~~~~~~~~~-~~-~~~~~~v~~~~ 683 (854)
+.+.|.+| . +...|.|+||-....+.+-+. . + .. ..+.++||...+..+...|...+.. .. ...++.+.-++
T Consensus 1 M~~~L~~L-~-~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKL-R-KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHH-H-TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHH-H-hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 35677887 3 579999999999998887773 2 2 22 2577999999999988888765421 11 12233333333
Q ss_pred HHHhc----cCCcceEecccceEEEee--ccCCCc----cch----hh-HHHHHHHHHHHhcCCCE-EEEEcCeEEEEee
Q 003042 684 KLYTE----TTDGSFIEDKETAIVWHH--QHADPH----FGS----CQ-AKELLDHLENVLANEPV-VVKRGQHIVEVKP 747 (854)
Q Consensus 684 ~~y~~----~~~g~~ie~k~~~l~~~~--~~~d~~----~~~----~~-~~el~~~l~~~l~~~~~-~v~~g~~~vEI~p 747 (854)
.+..+ ..-|.++|.+...+.+.. +++..+ |.. .. .+.+++.|++.+.+..+ .-+.|...++|.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 33221 245899999999888753 223211 110 11 23466778888887665 4567899999999
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCH
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDT 823 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~ 823 (854)
+|++|..++++|.+. ..+++++||| +.||.+.|...+. .+.+ |.+|
T Consensus 159 ~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p 208 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSP 208 (220)
T ss_dssp TT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSH
T ss_pred CCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCH
Confidence 999999999988653 2799999999 6899999987654 4555 6789
Q ss_pred hHHHHHHHHHH
Q 003042 824 AEVINLLEGLA 834 (854)
Q Consensus 824 ~eV~~~L~~l~ 834 (854)
++.++.|+.|.
T Consensus 209 ~DT~~~l~~l~ 219 (220)
T PF03332_consen 209 EDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 137
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.75 E-value=1.4e-08 Score=100.91 Aligned_cols=138 Identities=20% Similarity=0.222 Sum_probs=96.8
Q ss_pred CCeEEEEecCCCCCCCC---CC----CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEE
Q 003042 584 NSRLILLDYDGTVMPQT---SE----DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFT 656 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~---~~----~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I 656 (854)
.+|+++||+||||++.. .. .+..+..--.+|+.| ++.|+.++|+|+++...+...+.. +++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~---lgi~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEE---LKIK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHH---CCCc-------
Confidence 38999999999999831 01 122455566778888 778999999999987777776622 2210
Q ss_pred EECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 657 RWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
.|. .
T Consensus 75 ------~~f-----------------------------------------~----------------------------- 78 (169)
T TIGR02726 75 ------RFH-----------------------------------------E----------------------------- 78 (169)
T ss_pred ------EEE-----------------------------------------e-----------------------------
Confidence 000 0
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
.++ .|...++.+++++ |++++++++|||+.||++|++.+|. +++++++
T Consensus 79 -------~~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~--------------~~am~nA~~~l 130 (169)
T TIGR02726 79 -------GIK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGL--------------AVAVGDAVADV 130 (169)
T ss_pred -------cCC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCC--------------eEECcCchHHH
Confidence 002 3778899999999 9999999999999999999999997 4555553
Q ss_pred CcccceEeCC--Hh-HHHHHHHHHHhc
Q 003042 813 PSMAKYYLDD--TA-EVINLLEGLATE 836 (854)
Q Consensus 813 ~s~A~y~l~~--~~-eV~~~L~~l~~~ 836 (854)
+..|+|++.+ .+ .+..+++.+++.
T Consensus 131 k~~A~~I~~~~~~~g~v~e~~e~il~~ 157 (169)
T TIGR02726 131 KEAAAYVTTARGGHGAVREVAELILKA 157 (169)
T ss_pred HHhCCEEcCCCCCCCHHHHHHHHHHHh
Confidence 5788998753 22 356666666553
No 138
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.73 E-value=1.8e-07 Score=99.99 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecC-C-------CcccceEeCC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQ-K-------PSMAKYYLDD 822 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-~-------~s~A~y~l~~ 822 (854)
+....+.+++++ |.+++++++|||+. +|+.+.+.+|.. .+.|..|. . ...++|++++
T Consensus 181 ~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~~-----------~i~v~~G~~~~~~~~~~~~~pd~~~~s 246 (257)
T TIGR01458 181 SKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGMR-----------GIQVRTGKYRPSDEEKINVPPDLTCDS 246 (257)
T ss_pred CHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCCe-----------EEEECCCCCChHHhcccCCCCCEEECC
Confidence 566788888888 99999999999996 999999999973 46677773 1 2357899999
Q ss_pred HhHHHHHH
Q 003042 823 TAEVINLL 830 (854)
Q Consensus 823 ~~eV~~~L 830 (854)
..++.++|
T Consensus 247 l~el~~~l 254 (257)
T TIGR01458 247 LPHAVDLI 254 (257)
T ss_pred HHHHHHHH
Confidence 99988765
No 139
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.71 E-value=3.1e-07 Score=102.15 Aligned_cols=249 Identities=13% Similarity=0.042 Sum_probs=138.3
Q ss_pred HHHhcCCCCCeEEEeCcccch--HHHHH-Hh-ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMV--LPSFL-RK-RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYA 258 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~l--lp~~l-r~-~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~ 258 (854)
++..++| +|+|.+|..-+.. ++..+ ++ +..++|+.+++|.-||..-... -.........+-.||.|..++....
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~-~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN-YYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc-chhhHHHHHHHHhCCEEEECCHHHH
Confidence 4555777 4999998754321 22222 11 1126999999998777421111 0012233444556899999988766
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCcccc
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLF 338 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~ 338 (854)
+.+.+ .|+. ..++.+.|+..+..... .+....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhhc
Confidence 55543 1221 11222333332221100 00112345689999999943
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHH
Q 003042 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (854)
Q Consensus 339 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~a 418 (854)
.++ .+..|++ .|+++|.. ++.. . ..+.+.+.|.++.+|+..
T Consensus 182 ~~l----------~~~~~~~----~l~i~G~g-----~~~~-------~-------------~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFL----------KNWSQGI----KLTVFGPN-----PEDL-------E-------------NSANISYKGWFDPEELPN 222 (333)
T ss_pred hHH----------HhcCCCC----eEEEECCC-----cccc-------c-------------cCCCeEEecCCCHHHHHH
Confidence 321 1124443 47777632 2111 0 012345667899999999
Q ss_pred HHHhCcEEEEccCc-----------cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---C
Q 003042 419 YYAIAECCVVNCVR-----------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---G 484 (854)
Q Consensus 419 ly~~ADv~vv~S~~-----------EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 484 (854)
+|+. |+.+++.-. -.++--..||||| |.|+|++..++..+.+. .
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~---------------------G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA---------------------GLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC---------------------CCCEEECCCccHHHHHHhCCc
Confidence 9988 665553311 1233336678999 45999999988888882 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 485 ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
|+.++ +.++++++|... ++++++.+.+..++...........++
T Consensus 281 G~~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 281 GFVVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred eEEeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 78887 678999999873 445555555554444433333333333
No 140
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.71 E-value=2.4e-08 Score=94.56 Aligned_cols=54 Identities=17% Similarity=0.317 Sum_probs=44.9
Q ss_pred EEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 587 LILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 587 lI~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHH
Confidence 489999999999321 1127889999999999 77899999999999888888874
No 141
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.69 E-value=1.4e-08 Score=106.79 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--C-----cccceEeCCHh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--P-----SMAKYYLDDTA 824 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~-----s~A~y~l~~~~ 824 (854)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. + ..|+|+++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 678899999999 99999999999999999999999983 578888853 1 35899999999
Q ss_pred HHHHHHH
Q 003042 825 EVINLLE 831 (854)
Q Consensus 825 eV~~~L~ 831 (854)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9987764
No 142
>PRK10444 UMP phosphatase; Provisional
Probab=98.69 E-value=4e-07 Score=96.66 Aligned_cols=59 Identities=12% Similarity=0.215 Sum_probs=50.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+|+|+||+||||+. .. .+.+.+.++|++| ++.|.+++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 6788999999999 899999999999999888887766555555
No 143
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.68 E-value=4.7e-08 Score=105.25 Aligned_cols=71 Identities=20% Similarity=0.356 Sum_probs=61.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTA 824 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~ 824 (854)
.|..++..+++++ +++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999998 99999999999999999999999973 578888853 246999999999
Q ss_pred HHHHHHHHHHh
Q 003042 825 EVINLLEGLAT 835 (854)
Q Consensus 825 eV~~~L~~l~~ 835 (854)
++..++..|..
T Consensus 262 eL~~~~~~~~~ 272 (273)
T PRK13225 262 DLLQAVTQLMR 272 (273)
T ss_pred HHHHHHHHHhc
Confidence 99999887753
No 144
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.68 E-value=8.2e-07 Score=103.83 Aligned_cols=255 Identities=13% Similarity=0.111 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHh----cCCCCCeEE--EeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCC--hHHHHHH
Q 003042 172 YLSANKVFADKVMEV----INPDEDYVW--IHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV--RDEILKS 243 (854)
Q Consensus 172 Y~~vN~~fa~~i~~~----~~~~~D~vw--ihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~--r~eil~~ 243 (854)
|...+..++..+-+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhhC
Confidence 444445444443332 34 358877 78777766 4444454445556665 111 22 2456666
Q ss_pred hhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc
Q 003042 244 LLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF 323 (854)
Q Consensus 244 ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 323 (854)
+-.+|.+-.-|.+-.+........ .. ...+|..+|++.-...+ ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~----------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRE----------------NY-VEFDISRITPFDTRLRL--------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhh----------------cc-cCCcceeeCccceEEec--------------Chhhcc
Confidence 777787766665433332211100 00 11234445655431110 012233
Q ss_pred CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC---
Q 003042 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG--- 400 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~--- 400 (854)
.++.|.+++||+ +.|-+...|+|+.++++++|+.. |.+.|.. .. .++.+.+++++.++|..++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 466777888899 99999999999999999999876 6666632 11 2345666677777776642210
Q ss_pred ---------C----------ccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCC
Q 003042 401 ---------Y----------EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (854)
Q Consensus 401 ---------~----------~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~ 461 (854)
- ...+.|.+..+..++...|..|.++|.+|..|||+ +.+||++.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~---------------- 450 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA---------------- 450 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc----------------
Confidence 0 03667777777779999999999999999999999 99999997
Q ss_pred CCCCCCceEEEecCccccccC---CCceEeCCCCHHHHHHHHHHHhcCCH
Q 003042 462 NPPQKKSVIIVSEFIGCSPSL---SGAIRVNPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 462 ~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~~~A~ai~~aL~m~~ 508 (854)
|-|.| .-|.++.+ .+|.+| .|+.++++||...|+.+.
T Consensus 451 -----GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 451 -----GIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred -----CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 23555 66667777 358999 799999999999998764
No 145
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.66 E-value=2.4e-08 Score=94.50 Aligned_cols=71 Identities=18% Similarity=0.255 Sum_probs=53.7
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--CcccceEeC---CHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--PSMAKYYLD---DTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~s~A~y~l~---~~~e 825 (854)
+|-.+.+.|++++ ++.++++.++||+.||+++|+.+|.+ |+++-+.. +..|+|++. ..-.
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls------------~a~~dAh~~v~~~a~~Vt~~~GG~GA 147 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS------------VAVADAHPLLKQRADYVTSKKGGEGA 147 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc------------ccccccCHHHHHhhHhhhhccCcchH
Confidence 3888999999999 99999999999999999999999975 45544432 577889875 2344
Q ss_pred HHHHHHHHHhc
Q 003042 826 VINLLEGLATE 836 (854)
Q Consensus 826 V~~~L~~l~~~ 836 (854)
|.++++-+...
T Consensus 148 vREv~dlil~a 158 (170)
T COG1778 148 VREVCDLILQA 158 (170)
T ss_pred HHHHHHHHHHc
Confidence 55555544443
No 146
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.62 E-value=3.1e-08 Score=106.81 Aligned_cols=71 Identities=20% Similarity=0.226 Sum_probs=58.8
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l 820 (854)
+.+..|...++.+++.+ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|++++
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 33445778999999999 99999999999999999999999973 578888742 24789999
Q ss_pred CCHhHHHHHHH
Q 003042 821 DDTAEVINLLE 831 (854)
Q Consensus 821 ~~~~eV~~~L~ 831 (854)
+++.++.+++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999887655
No 147
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.60 E-value=3.6e-08 Score=103.05 Aligned_cols=67 Identities=22% Similarity=0.248 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~e 825 (854)
|+.+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|.+|.. ...++|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 678999999999 99999999999999999999999973 467777743 2468899999999
Q ss_pred HHHHHHH
Q 003042 826 VINLLEG 832 (854)
Q Consensus 826 V~~~L~~ 832 (854)
+..+|..
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888754
No 148
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.58 E-value=7e-07 Score=96.77 Aligned_cols=59 Identities=17% Similarity=0.322 Sum_probs=45.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+|+|+||+||||++ ... +.+.+.++|++| +++|..++++|||+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 68999999999998 444 445589999999 889999999999987666555543344444
No 149
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.53 E-value=7.5e-06 Score=94.11 Aligned_cols=353 Identities=18% Similarity=0.239 Sum_probs=161.6
Q ss_pred cccccccccccCCCCCCCCCccChhcHH--HHHHHHHHHHHHHHHhcCCCCC--eEEEeCcccchHHHHHHhccCCCeEE
Q 003042 143 KHYLWPLFHYMLPLTASHGARFDRGEWQ--AYLSANKVFADKVMEVINPDED--YVWIHDYHLMVLPSFLRKRFHRVKVG 218 (854)
Q Consensus 143 ~~~lwp~~H~~~~~~~~~~~~~~~~~w~--~Y~~vN~~fa~~i~~~~~~~~D--~vwihDyhl~llp~~lr~~~~~~~i~ 218 (854)
+.-||-.|+--.+ ..+.+..+ .+--+-..|-+...+.... .. +.+.|.+..-+-..+||++.|++.-.
T Consensus 100 k~~lW~~~gIdS~-------~~~~dynea~~Fgyava~fi~~f~~~~~~-~~~ViaHfHEWmaG~gll~lr~~~~~VaTv 171 (633)
T PF05693_consen 100 KGELWELFGIDSP-------HGDGDYNEAVMFGYAVAWFIEEFYKFYEE-KPKVIAHFHEWMAGVGLLYLRKRKPDVATV 171 (633)
T ss_dssp HHHHHHHH------------TT-HHHHHHHHHHHHHHHHHHHHHHH-S--SEEEEEEEESGGGTTHHHHHHHTT-SCEEE
T ss_pred HHHHHHHcCCCCC-------CCCcchhHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEechHhHhHHHHHHhccCCCeeEE
Confidence 3557888875432 12222221 1222334555555555442 23 34556665555566789999999999
Q ss_pred EEecCCCC-------ChhhhhcCCC--hHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceee---EEECC
Q 003042 219 FFLHSPFP-------SSEIYRTLPV--RDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIG---LDYFG 286 (854)
Q Consensus 219 ~flH~pfP-------~~e~~~~lp~--r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~---i~~~g 286 (854)
|+.|.--+ ..++|..|+. .++...- -.-+.+|.++.+.....--.+.-..+.+ -..-+
T Consensus 172 FTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~----------~~i~~k~~iEraaA~~AdvFTTVSeITa~Ea~~LL~ 241 (633)
T PF05693_consen 172 FTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGE----------RNIYHKHSIERAAAHYADVFTTVSEITAKEAEHLLK 241 (633)
T ss_dssp EEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHH----------TT-HHHHHHHHHHHHHSSEEEESSHHHHHHHHHHHS
T ss_pred EEecccchhhHhhcCCCcHHHHhhccCccccccC----------ccchHHHHHHHHHHHhcCeeeehhhhHHHHHHHHhC
Confidence 99996543 3344544441 1111110 0012334433321111000000000000 00112
Q ss_pred eEEEEEEeccccCchHHHhhhC----CchHHHHHHHH-HHHc-------CCCE-EEEEecCccc-cCCHHHHHHHHHHHH
Q 003042 287 RTVSIKILPVGIHMGQFESIMS----LDVTGQKVKEL-KEKF-------DGKI-VILGVDDMDL-FKGISLKFLAMGQLL 352 (854)
Q Consensus 287 r~~~i~v~p~GId~~~~~~~~~----~~~~~~~~~~l-~~~~-------~~~~-iil~VdRld~-~KGi~~~l~A~~~ll 352 (854)
|..- .|.|+|+|.+.|...-. .....+++.++ +..+ .++. +|.-.||.++ .||++..|.|+.+|-
T Consensus 242 r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn 320 (633)
T PF05693_consen 242 RKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLN 320 (633)
T ss_dssp S--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHH
T ss_pred CCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHH
Confidence 2221 25699999887643210 01123334443 3333 1344 4556899995 899999999998874
Q ss_pred H---hCCCCCCcEEEEEEecCCCCChh---------HHHHHHHHHHHHHHHHhhcc------CC----------------
Q 003042 353 E---QHPDLRGKVVLVQITNPARSSGK---------DVQDLLSDTNRIAEEINLNF------GK---------------- 398 (854)
Q Consensus 353 ~---~~p~~~~~vvLvqi~~p~r~~~~---------~~~~l~~~v~~~v~~In~~~------~~---------------- 398 (854)
. .... +.-|+..|-.|+....- -+.++++.+.++.++|..+- |.
T Consensus 321 ~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~l 398 (633)
T PF05693_consen 321 HRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRL 398 (633)
T ss_dssp HHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHH
T ss_pred HHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHH
Confidence 3 2221 23333334445433221 11233333333333332110 10
Q ss_pred -----------------------------------------CCCccEEEEcCCCCh------hhHHHHHHhCcEEEEccC
Q 003042 399 -----------------------------------------PGYEPIVIIKEPLST------QDKVPYYAIAECCVVNCV 431 (854)
Q Consensus 399 -----------------------------------------~~~~pv~~~~~~~~~------~el~aly~~ADv~vv~S~ 431 (854)
.+-..|+|....++. -++..+.+.+|++|+||.
T Consensus 399 kr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY 478 (633)
T PF05693_consen 399 KRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY 478 (633)
T ss_dssp HHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--S
T ss_pred HHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccc
Confidence 012245555443332 367889999999999999
Q ss_pred ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC--------CCceE-eCCC--C----HHHH
Q 003042 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--------SGAIR-VNPW--N----VDAV 496 (854)
Q Consensus 432 ~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~ai~-vnP~--d----~~~~ 496 (854)
+|.+|.+|+|++|. +-|-|.|+.+|....+ ..|+. |+-. + ++++
T Consensus 479 YEPWGYTPlE~~a~---------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~l 537 (633)
T PF05693_consen 479 YEPWGYTPLECTAF---------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQL 537 (633)
T ss_dssp SBSS-HHHHHHHHT---------------------T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHH
T ss_pred cccccCChHHHhhc---------------------CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHH
Confidence 99999999999998 4599999999976444 12544 3332 2 3566
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 497 ADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
|+.|.....++..+|....++..+.-..-+|.+...-+.+.
T Consensus 538 a~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 538 ADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 67777777888877766555555444445666555444443
No 150
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.53 E-value=4.4e-06 Score=100.90 Aligned_cols=182 Identities=8% Similarity=0.038 Sum_probs=123.2
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 327 IVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
.+|.++.|+...||..+++..+++|.+ .+|+ ..+++|..|...-.+.. -+++.+++.+++.+ -++.. .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~~----kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFRG----RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCCC----cE
Confidence 378999999999999999999999865 3444 24778877754322211 13444455444431 12211 36
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccC--ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~--~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
+|+.+ .+..--..+++.||+++.||. .|.-|+.-+-||. .|.|-+|..-|...+-
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~----------------------NG~LnlSvlDGww~E~ 606 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL----------------------NGGLNLSVLDGWWDEG 606 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH----------------------cCCeeeecccCccccc
Confidence 66665 455555588999999999999 7888887666666 3788899988887666
Q ss_pred -C--CceEeCC------------CCHHHHHHHHHHHhc----------CCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 483 -S--GAIRVNP------------WNVDAVADAMDSALQ----------MENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 483 -~--~ai~vnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
. +|..+.+ .|.+++-+.|.+.+. .|..=.+.+.+.+....-.+++.+.++++++.
T Consensus 607 ~~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 607 YDGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred cCCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 2 3788877 556666677765443 13333444555555556678999999999888
Q ss_pred HHH
Q 003042 538 LER 540 (854)
Q Consensus 538 l~~ 540 (854)
+..
T Consensus 687 ~Y~ 689 (778)
T cd04299 687 FYL 689 (778)
T ss_pred hHH
Confidence 763
No 151
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.52 E-value=1.5e-06 Score=92.63 Aligned_cols=53 Identities=21% Similarity=0.362 Sum_probs=44.2
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcC---CCccchhhhhcC
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSG 642 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TG---R~~~~l~~~~~~ 642 (854)
+|.|+||+||||++ .+..++ .+.++|++| ++.|.+++++|| |+...+...+..
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 37899999999999 555555 789999999 899999999996 778777776643
No 152
>PLN02645 phosphoglycolate phosphatase
Probab=98.46 E-value=1.1e-06 Score=96.80 Aligned_cols=60 Identities=22% Similarity=0.313 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
++|+|+||+||||+. .+ .+-+.+.++|++| ++.|.+++++|+|+......++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 468999999999998 55 4557889999999 899999999999998777776655445554
No 153
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.43 E-value=9.8e-08 Score=98.84 Aligned_cols=64 Identities=17% Similarity=0.157 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~e 825 (854)
+...+..+++.+ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 678899999999 99999999999999999999999983 567777743 2468899999998
Q ss_pred HHHH
Q 003042 826 VINL 829 (854)
Q Consensus 826 V~~~ 829 (854)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7764
No 154
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.43 E-value=8.5e-07 Score=92.36 Aligned_cols=62 Identities=21% Similarity=0.354 Sum_probs=49.7
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeCC--HhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLDD--TAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~~--~~e 825 (854)
.|+..++.+++++ +++++++++|||+.+|+++++.+|. ++.++.. +..|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~--------------~i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGL--------------GIAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCC--------------eEEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999998 9999999999999999999999986 3445443 3678998874 456
Q ss_pred HHHH
Q 003042 826 VINL 829 (854)
Q Consensus 826 V~~~ 829 (854)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5554
No 155
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.42 E-value=8.3e-07 Score=91.83 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=38.4
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.+-.|..+++.+++.+ |+++++++++|||.||.+||+.+|..
T Consensus 141 ~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 141 DGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred CcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 3556999999999998 99999999999999999999999973
No 156
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.40 E-value=2.1e-06 Score=92.37 Aligned_cols=72 Identities=8% Similarity=0.038 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------------
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------------ 812 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------------ 812 (854)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|.. +++|.+|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 677888999998 885 69999999999999999999973 578888753
Q ss_pred -----------CcccceEeCCHhHHHHHHHHHHhcc
Q 003042 813 -----------PSMAKYYLDDTAEVINLLEGLATES 837 (854)
Q Consensus 813 -----------~s~A~y~l~~~~eV~~~L~~l~~~~ 837 (854)
...|++++++..++..+|+.+....
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 2468899999999998887665433
No 157
>PRK06769 hypothetical protein; Validated
Probab=98.37 E-value=8.3e-07 Score=89.07 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------CcccceE
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------PSMAKYY 819 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------~s~A~y~ 819 (854)
+......+++.+ |.+++++++|||+.+|+.+.+.+|.. ++.|.+|.. ...++|+
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNAT-----------TILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCchhhhhhhcccccCCCcch
Confidence 566788888888 99999999999999999999999983 578888752 1357788
Q ss_pred eCCHhHHHHHH
Q 003042 820 LDDTAEVINLL 830 (854)
Q Consensus 820 l~~~~eV~~~L 830 (854)
++++.++..+|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88999988765
No 158
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.36 E-value=6.2e-07 Score=95.46 Aligned_cols=77 Identities=14% Similarity=0.091 Sum_probs=59.3
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
+++..++.+...-.-+| +...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|
T Consensus 149 ~~Fd~iv~~~~~~~~KP----~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g 210 (248)
T PLN02770 149 DFFQAVIIGSECEHAKP----HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTR 210 (248)
T ss_pred hhCcEEEecCcCCCCCC----ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCC
Confidence 33444555544333344 778899999999 99999999999999999999999973 5788877
Q ss_pred CC-----CcccceEeCCHhH
Q 003042 811 QK-----PSMAKYYLDDTAE 825 (854)
Q Consensus 811 ~~-----~s~A~y~l~~~~e 825 (854)
.. ...|++++++..+
T Consensus 211 ~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 211 NPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CCHHHHhhcCCCEEeccchh
Confidence 53 3478899999888
No 159
>PRK11587 putative phosphatase; Provisional
Probab=98.33 E-value=1.2e-06 Score=91.39 Aligned_cols=61 Identities=10% Similarity=-0.024 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~~~~eV 826 (854)
+......+++.+ |++|+++++|||+.+|+.+.+.+|.. +++|..|.. ...|++++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 677888888988 99999999999999999999999873 456665542 24678888887775
No 160
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.33 E-value=5.8e-07 Score=93.66 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccE-EEEEecCC------CcccceEeCCH
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEV-FACTVGQK------PSMAKYYLDDT 823 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~-~aV~vG~~------~s~A~y~l~~~ 823 (854)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|.. + ++|..|.. ...|++++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 778999999998 887 79999999999999999999984 4 66777742 24688899999
Q ss_pred hHHHHHH
Q 003042 824 AEVINLL 830 (854)
Q Consensus 824 ~eV~~~L 830 (854)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8877654
No 161
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.33 E-value=3e-06 Score=85.66 Aligned_cols=66 Identities=15% Similarity=0.140 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----Cccc--ceEeCCHh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMA--KYYLDDTA 824 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A--~y~l~~~~ 824 (854)
+...+..+++.+ |++++++++|||+.+|+.+.+.+|.. +++|..|.. ...+ ++++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 567888889988 99999999999999999999999973 467777743 2345 88999999
Q ss_pred HHHHHHH
Q 003042 825 EVINLLE 831 (854)
Q Consensus 825 eV~~~L~ 831 (854)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8887765
No 162
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.32 E-value=5.8e-07 Score=88.53 Aligned_cols=52 Identities=17% Similarity=0.372 Sum_probs=45.5
Q ss_pred EEEEecCCCCCCCCCCC-----------CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchh---hhhcC
Q 003042 587 LILLDYDGTVMPQTSED-----------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG---NWFSG 642 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~-----------~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~---~~~~~ 642 (854)
+|++|+||||++ ++ ..+++.+.++++++ +++|+.++++|||+..... +++..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 55 67899999999999 8999999999999988774 66644
No 163
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.30 E-value=8.6e-07 Score=92.64 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=50.2
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-----cccceEeCCHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-----SMAKYYLDDTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-----s~A~y~l~~~~e 825 (854)
.+...++.+++.+ |++++++++|||+.+|+++.+.+|.. ++.|..+... ..|++++.+..+
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 3677999999999 99999999999999999999999973 3555544321 357888888877
Q ss_pred HH
Q 003042 826 VI 827 (854)
Q Consensus 826 V~ 827 (854)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 64
No 164
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.29 E-value=5.3e-06 Score=84.88 Aligned_cols=38 Identities=29% Similarity=0.432 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+|+.+++.+++.+ |++++++++|||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5888999999988 9999999999999999999999997
No 165
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.29 E-value=4.8e-06 Score=88.83 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------------
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------------ 812 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------------ 812 (854)
+......+++++ |+. ++++++|||+.+|+.+.+.+|.. +++|.+|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 677888889988 885 99999999999999999999973 688888853
Q ss_pred -----------CcccceEeCCHhHHHHHH
Q 003042 813 -----------PSMAKYYLDDTAEVINLL 830 (854)
Q Consensus 813 -----------~s~A~y~l~~~~eV~~~L 830 (854)
...|+++++++.++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 245889999999877654
No 166
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.29 E-value=1.1e-06 Score=97.85 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=67.0
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
+++..++.+.....-+| +......+++.+ |+.++++++|||+.+|+.+.+.+|.. +++|..+
T Consensus 257 ~yFd~Iv~sddv~~~KP----~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~ 318 (381)
T PLN02575 257 GFFSVIVAAEDVYRGKP----DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASK 318 (381)
T ss_pred HHceEEEecCcCCCCCC----CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCC
Confidence 44455555554433344 778899999999 99999999999999999999999973 5666655
Q ss_pred CC---CcccceEeCCHhHH-HHHHHHHHhccC
Q 003042 811 QK---PSMAKYYLDDTAEV-INLLEGLATESV 838 (854)
Q Consensus 811 ~~---~s~A~y~l~~~~eV-~~~L~~l~~~~~ 838 (854)
.. ...|++++++.+++ ...|+.|...-.
T Consensus 319 ~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~~ 350 (381)
T PLN02575 319 HPIYELGAADLVVRRLDELSIVDLKNLADIES 350 (381)
T ss_pred CChhHhcCCCEEECCHHHHHHHHHhhhhhcCc
Confidence 32 23589999999998 566677776543
No 167
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.27 E-value=1.7e-06 Score=92.52 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=62.5
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
.++..++.+...-.-+| +......+++++ |++++++++|||+.+|+.+.+.+|.. +++|. |
T Consensus 150 ~~Fd~ii~~~d~~~~KP----~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g 210 (260)
T PLN03243 150 GFFSVVLAAEDVYRGKP----DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-G 210 (260)
T ss_pred hhCcEEEecccCCCCCC----CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-c
Confidence 33444555543322344 678899999999 99999999999999999999999973 45665 5
Q ss_pred CC----CcccceEeCCHhHHHHHH-HHHHhc
Q 003042 811 QK----PSMAKYYLDDTAEVINLL-EGLATE 836 (854)
Q Consensus 811 ~~----~s~A~y~l~~~~eV~~~L-~~l~~~ 836 (854)
.. -..|++++++..++...+ ..++..
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~ 241 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVVDLKNLSDL 241 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHHHHhhhhcc
Confidence 32 246899999999876544 444443
No 168
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.26 E-value=5.2e-05 Score=86.12 Aligned_cols=134 Identities=18% Similarity=0.149 Sum_probs=82.2
Q ss_pred CCEEE--EEecCccc-cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003042 325 GKIVI--LGVDDMDL-FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (854)
Q Consensus 325 ~~~ii--l~VdRld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~ 401 (854)
++++| ++.+|..+ .|++..+++|++.+.+++|+++ ++.++.+. .....+ +++..+ ++. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~~~----~~~~~~----~~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRLQF----EQIKAE----YGP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHHHH----HHHHHH----hCC-CC
Confidence 55554 34469888 7999999999999999888765 54433221 111122 222222 111 11
Q ss_pred ccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEec-------
Q 003042 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE------- 474 (854)
Q Consensus 402 ~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se------- 474 (854)
.+.++.+ +...+|++||++|.+| |.+.+|+++|+. |.|++-
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~---------------------P~Vv~yk~~pl~~ 300 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT---------------------PMVVGYRMKPLTF 300 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC---------------------CEEEEEcCCHHHH
Confidence 2444433 3557999999999999 666779999944 555551
Q ss_pred ----------CccccccCCC-c----eEeCCCCHHHHHHHHHHHhcCC
Q 003042 475 ----------FIGCSPSLSG-A----IRVNPWNVDAVADAMDSALQME 507 (854)
Q Consensus 475 ----------~~G~~~~l~~-a----i~vnP~d~~~~A~ai~~aL~m~ 507 (854)
+.+.+..+.+ + ++-+-.+++.+++++.+.|..+
T Consensus 301 ~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 301 LIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2222222311 1 2223346789999999999877
No 169
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.25 E-value=1.2e-06 Score=90.40 Aligned_cols=66 Identities=15% Similarity=0.254 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~e 825 (854)
|...++.+++.+ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|+++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 778889999998 99999999999999999999999983 578999853 3568999999999
Q ss_pred HHHHHH
Q 003042 826 VINLLE 831 (854)
Q Consensus 826 V~~~L~ 831 (854)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887664
No 170
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.23 E-value=7.8e-06 Score=82.27 Aligned_cols=63 Identities=13% Similarity=0.102 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~~~eV 826 (854)
+...+..+++++ |++++++++|||+.+|+...+.+|.. .++.|.+|.. ...|+++++++.++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 677888999998 99999999999999999999999973 1257778853 23589999998887
Q ss_pred H
Q 003042 827 I 827 (854)
Q Consensus 827 ~ 827 (854)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
No 171
>PLN02954 phosphoserine phosphatase
Probab=98.23 E-value=1.8e-06 Score=90.29 Aligned_cols=66 Identities=18% Similarity=0.282 Sum_probs=50.2
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeC
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLD 821 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~ 821 (854)
.+.+|..+++.+++.+ |. +++++|||+.||+.|.++++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999998876 54 6899999999999997776542 34556632 235899999
Q ss_pred CHhHHHHHH
Q 003042 822 DTAEVINLL 830 (854)
Q Consensus 822 ~~~eV~~~L 830 (854)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999988765
No 172
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.15 E-value=0.00075 Score=74.91 Aligned_cols=300 Identities=17% Similarity=0.261 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEeCcc----cchHHHH--HHhccCCCeEEEEecCC---------CCChhhhhcCCCh
Q 003042 173 LSANKVFADKVMEVINPDEDYVWIHDYH----LMVLPSF--LRKRFHRVKVGFFLHSP---------FPSSEIYRTLPVR 237 (854)
Q Consensus 173 ~~vN~~fa~~i~~~~~~~~D~vwihDyh----l~llp~~--lr~~~~~~~i~~flH~p---------fP~~e~~~~lp~r 237 (854)
.+.+++|+- ......|++..||+|-=- ..++|-. ||+++|+.++..+.-+| |++.-.-+-+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 467788871 223345667899999554 3444544 89999999999888665 2333222334432
Q ss_pred H-HHHHHh---hcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEE---------------------EEE
Q 003042 238 D-EILKSL---LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV---------------------SIK 292 (854)
Q Consensus 238 ~-eil~~l---l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~---------------------~i~ 292 (854)
. -.++.. ...|+.-|---+.=-|++..|.+. |+. .+-.|+|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 122222 234554444444444455544332 111 111122111 111
Q ss_pred EeccccCchHHHhhh---------------CCchHHHHHHHHHHHcCC-CEEEEEecCccccCCHHHHHHHHHHHHHhCC
Q 003042 293 ILPVGIHMGQFESIM---------------SLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHP 356 (854)
Q Consensus 293 v~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~ll~~~p 356 (854)
+.-.-+|.++|.... ..|........+|.++++ +++++..+..+ .--.-.+.++..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH~--GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTHE--GEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCCC--chHHHHHHHHHHHHhhCC
Confidence 222234444443321 123344566778888877 89999988733 223346789999999999
Q ss_pred CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC-------CCccEEEEcCCCChhhHHHHHHhCcEEEEc
Q 003042 357 DLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-------GYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (854)
Q Consensus 357 ~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~-------~~~pv~~~~~~~~~~el~aly~~ADv~vv~ 429 (854)
+.. || +. | +.++ =-..+++++.+.|-+++.- ...+|++... .-|+..+|++||++++-
T Consensus 260 ~~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dt---mGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDT---MGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEec---HhHHHHHHhhccEEEEC
Confidence 753 33 32 3 3343 3456777888877666431 1224443332 67999999999998765
Q ss_pred cC---ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe----cCccccccC---CCceEeCCCCHHHHHHH
Q 003042 430 CV---RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS----EFIGCSPSL---SGAIRVNPWNVDAVADA 499 (854)
Q Consensus 430 S~---~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~ai~vnP~d~~~~A~a 499 (854)
-. .-|-| ++|+.+| +.|+|.. .|.-+.+.+ .+++.|+. .+.++++
T Consensus 325 GSlv~~GGHN--~LEpa~~---------------------~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~ 379 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAF---------------------GTPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKA 379 (419)
T ss_pred CcccCCCCCC--hhhHHHc---------------------CCCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHH
Confidence 43 34555 5699998 3466644 344444444 23667764 7788888
Q ss_pred HHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 500 MDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
+...+.. +.+|+.+.++....+.++
T Consensus 380 v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 380 VELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 8777766 667777767766665443
No 173
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.15 E-value=3.9e-06 Score=84.08 Aligned_cols=41 Identities=27% Similarity=0.461 Sum_probs=36.7
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a 789 (854)
.+.+.+|+.+++.+++.+ |++++++++|||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999887 89999999999999999999864
No 174
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.11 E-value=5.5e-06 Score=90.07 Aligned_cols=62 Identities=13% Similarity=0.066 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceEeCCHhHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYYLDDTAEVI 827 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~~~eV~ 827 (854)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|..|... ..|++++++..++.
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 567899999999 99999999999999999999999973 5677777431 45899999877754
No 175
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.06 E-value=9.8e-06 Score=77.31 Aligned_cols=46 Identities=26% Similarity=0.432 Sum_probs=37.4
Q ss_pred eEEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 586 klI~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 6899999999996210 1245678899999999 88999999999986
No 176
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.05 E-value=1.5e-05 Score=83.55 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=28.3
Q ss_pred cccccCHHHHHHHHhhcCCeEEEEecCCCCCCC
Q 003042 567 EFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599 (854)
Q Consensus 567 ~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~ 599 (854)
.-...++++|.++....+.-.|+||+||||++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDS 77 (237)
T TIGR01672 45 PIHWISVAQIENSLEGRPPIAVSFDIDDTVLFS 77 (237)
T ss_pred CeeEEEHHHHHHhcCCCCCeEEEEeCCCccccC
Confidence 355688999999998877779999999999983
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.03 E-value=6.9e-06 Score=77.29 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=41.7
Q ss_pred eEEEEecCCCCCCCCC---CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchh
Q 003042 586 RLILLDYDGTVMPQTS---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (854)
Q Consensus 586 klI~~DlDGTLl~~~~---~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~ 637 (854)
|+|++|+||||+.... ....+.+.++++|+++ ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134779999999999 7899999999999987654
No 178
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.01 E-value=1.5e-05 Score=82.13 Aligned_cols=54 Identities=11% Similarity=0.212 Sum_probs=40.4
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccce-EeCCHhHHHHHHHHHHh
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKY-YLDDTAEVINLLEGLAT 835 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y-~l~~~~eV~~~L~~l~~ 835 (854)
..++++++|||+.||++|.+++|. +|.++... ..+.+ .+++..++..+|.....
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~--------------~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADA--------------GILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCC--------------CEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 345899999999999999999985 34455431 24455 78999999888877654
No 179
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.95 E-value=1e-05 Score=84.31 Aligned_cols=61 Identities=13% Similarity=0.232 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-------cccceEeCCH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-------SMAKYYLDDT 823 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-------s~A~y~l~~~ 823 (854)
+....+.+++.+ |++++++++|||+. +|+.+.+.+|.. ++.|..|... ..++|++++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 667889999998 99999999999997 999999999973 3555555431 2467788877
Q ss_pred hHH
Q 003042 824 AEV 826 (854)
Q Consensus 824 ~eV 826 (854)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 664
No 180
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.94 E-value=4.2e-05 Score=76.17 Aligned_cols=50 Identities=24% Similarity=0.373 Sum_probs=38.4
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCC---------CCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKR---------PSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~---------is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
.|+.|+++||+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 10 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 10 KPQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred CCcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 466899999999999973211101 237789999999 88999999999864
No 181
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.93 E-value=9.5e-06 Score=72.18 Aligned_cols=88 Identities=16% Similarity=0.179 Sum_probs=69.2
Q ss_pred EEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-C--ceEeCCCCHHHHHHHHH
Q 003042 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMD 501 (854)
Q Consensus 425 v~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~vnP~d~~~~A~ai~ 501 (854)
+++.|+..+|+++..+|+||| |+|+|.+...+....+. + ++.++ |++++++++.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~---------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~ 57 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC---------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE 57 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC---------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH
Confidence 467788899999999999999 45666666777777773 3 67777 9999999999
Q ss_pred HHhcCCHHHHHHHHHHHhcccc-ccChHHHHHHHHH
Q 003042 502 SALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQ 536 (854)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~ 536 (854)
.+++.|+ +++...++.+++|. .|++.+-+++|++
T Consensus 58 ~ll~~~~-~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 58 YLLENPE-ERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHCCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 9999665 55555666666665 7999988888763
No 182
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.93 E-value=7.7e-05 Score=77.80 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC------CCcccceEeCCH
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ------KPSMAKYYLDDT 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~------~~s~A~y~l~~~ 823 (854)
..|..+++ ++ +..++++++|||+.||+.|++.+|.. ++ -+. ....+.+.+++.
T Consensus 147 ~~K~~~l~----~~---~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~f 205 (219)
T PRK09552 147 CCKPSLIR----KL---SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFETF 205 (219)
T ss_pred CchHHHHH----Hh---ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCCH
Confidence 44776554 44 67788999999999999999999862 22 221 234466667899
Q ss_pred hHHHHHHHHHHh
Q 003042 824 AEVINLLEGLAT 835 (854)
Q Consensus 824 ~eV~~~L~~l~~ 835 (854)
.+|...|+.+-+
T Consensus 206 ~ei~~~l~~~~~ 217 (219)
T PRK09552 206 HDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHhc
Confidence 999999887754
No 183
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.89 E-value=4.9e-05 Score=74.10 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|...++.+++.+ |++++++++|||+..|+.+.+.+|..
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 778899999998 99999999999999999999999873
No 184
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.86 E-value=1.1e-05 Score=93.86 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=53.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCHhHH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDTAEV 826 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~~eV 826 (854)
.|...+..+++.+ +++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..++
T Consensus 386 ~kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 386 NKSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CCcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 3677777777765 468999999999999999999973 467777643 24689999999999
Q ss_pred HHHHHHH
Q 003042 827 INLLEGL 833 (854)
Q Consensus 827 ~~~L~~l 833 (854)
.+++..+
T Consensus 450 ~~~l~~~ 456 (459)
T PRK06698 450 KGILSTV 456 (459)
T ss_pred HHHHHHH
Confidence 8887654
No 185
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.83 E-value=2.7e-05 Score=79.74 Aligned_cols=60 Identities=12% Similarity=0.081 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh--hhhcCCCCCCCCccEEEEEecCCC--cccceEeCCHhHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI--EQAVADPSVPGIAEVFACTVGQKP--SMAKYYLDDTAEVI 827 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a--g~~~~~~~~~~~~~~~aV~vG~~~--s~A~y~l~~~~eV~ 827 (854)
|...+..+++.+ | ++.+++|||+.+|+...+.+ |.. ++.|.+|+.+ ..+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 778999999998 7 78899999999999999998 983 5788888643 26668888877764
No 186
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.82 E-value=0.00011 Score=84.11 Aligned_cols=122 Identities=11% Similarity=0.098 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
...|+|++.+.++.|++. |=+ |..+ ++...+.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999976 544 5433 111233333 11 2 34677776 44567889999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-ccccccCCCceEeCCCCHHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSLSGAIRVNPWNVDAVADAM 500 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~~ai~vnP~d~~~~A~ai 500 (854)
.||+++.+|..||++++..||+.. |-|++.-+. .|..+.+.++.++++.|+++++++|
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~---------------------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i 405 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY---------------------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKL 405 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc---------------------CCcEEEEecccCCcccccCCceecCCCHHHHHHHH
Confidence 999999999999999999999996 224444444 4555556678999999999999999
Q ss_pred HHHhcCCH
Q 003042 501 DSALQMEN 508 (854)
Q Consensus 501 ~~aL~m~~ 508 (854)
.++|+.+.
T Consensus 406 ~~lL~d~~ 413 (438)
T TIGR02919 406 KDLLNDPN 413 (438)
T ss_pred HHHhcCHH
Confidence 99999874
No 187
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.82 E-value=4.2e-05 Score=72.73 Aligned_cols=54 Identities=15% Similarity=0.153 Sum_probs=41.1
Q ss_pred eEEEEecCCCCCCCCC--CCC-------CCCHHHHHHHHHcccCCCCeEEEEcCC-Cccchhhhh
Q 003042 586 RLILLDYDGTVMPQTS--EDK-------RPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWF 640 (854)
Q Consensus 586 klI~~DlDGTLl~~~~--~~~-------~is~~~~~aL~~L~~~~g~~v~I~TGR-~~~~l~~~~ 640 (854)
|+|++||||||++... ... .+.+.+.+.|+.| ++.|+.++|+|++ ........+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999998421 111 2467999999999 8899999999999 555554444
No 188
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.79 E-value=3.4e-05 Score=82.05 Aligned_cols=56 Identities=13% Similarity=0.258 Sum_probs=48.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRP---STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
...++|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|++++..+...++.
T Consensus 124 ~~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~ 182 (301)
T TIGR01684 124 EPPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRK 182 (301)
T ss_pred ccceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHH
Confidence 3468999999999999 66554 69999999999 899999999999999988877743
No 189
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.76 E-value=3.3e-05 Score=80.95 Aligned_cols=69 Identities=12% Similarity=0.040 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--CcccceEeCCHhHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--PSMAKYYLDDTAEVINL 829 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~s~A~y~l~~~~eV~~~ 829 (854)
+......+++++ |++++++++|||+.+|+...+.+|.. .+++|..+.. ...+.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 577899999999 99999999999999999999999873 1355666543 24454556777777777
Q ss_pred HHHH
Q 003042 830 LEGL 833 (854)
Q Consensus 830 L~~l 833 (854)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
No 190
>PRK09449 dUMP phosphatase; Provisional
Probab=97.74 E-value=3e-05 Score=80.95 Aligned_cols=66 Identities=18% Similarity=0.129 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEec-CC---CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVG-QK---PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG-~~---~s~A~y~l~~~~e 825 (854)
+......+++.+ |.. ++++++|||+. +|+...+.+|.. ++.|..+ .. ...++|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 667889999998 875 58999999998 799999999973 2444432 21 2357899999999
Q ss_pred HHHHHH
Q 003042 826 VINLLE 831 (854)
Q Consensus 826 V~~~L~ 831 (854)
+..+|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988765
No 191
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.73 E-value=0.00015 Score=71.86 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|...+..+++.+ +++++++++|||+.+|+++.+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 777889999988 99999999999999999999999973
No 192
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.71 E-value=0.00015 Score=79.32 Aligned_cols=55 Identities=18% Similarity=0.370 Sum_probs=45.5
Q ss_pred CeEEEEecCCCCCCCCCC---------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 585 SRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~---------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+++++|+||||...... +..+.+.+.+.|++| ++.|+.++++|||+.......+
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l 221 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTV 221 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHH
Confidence 579999999999973211 345789999999999 7889999999999988777666
No 193
>PLN02940 riboflavin kinase
Probab=97.69 E-value=1.6e-05 Score=89.92 Aligned_cols=77 Identities=17% Similarity=0.108 Sum_probs=57.6
Q ss_pred CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 733 PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 733 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
+..+.++...-.-+| +......+++.+ |++++++++|||+.+|+.+.+.+|.. +++|++|..
T Consensus 137 Fd~ii~~d~v~~~KP----~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~ 198 (382)
T PLN02940 137 FSVIVGGDEVEKGKP----SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPK 198 (382)
T ss_pred CCEEEehhhcCCCCC----CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCc
Confidence 334444443322334 778899999999 99999999999999999999999983 567776642
Q ss_pred ----CcccceEeCCHhHHH
Q 003042 813 ----PSMAKYYLDDTAEVI 827 (854)
Q Consensus 813 ----~s~A~y~l~~~~eV~ 827 (854)
...|++.+++..++.
T Consensus 199 ~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 199 QTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred chhhccCccEEeCCHhHcC
Confidence 256788888887754
No 194
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.68 E-value=1.6e-05 Score=83.00 Aligned_cols=38 Identities=5% Similarity=0.009 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+......+++.+ |++++++++|||+.+|+...+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 788999999999 99999999999999999999999973
No 195
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.0012 Score=70.47 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=43.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+++.++||+||||.. ...+-+...++|++| +++|.+++++|..+...-+...
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~~~~ 58 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSREVVA 58 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHHHHH
Confidence 458899999999998 455668999999999 8999999999988776555443
No 196
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.65 E-value=0.00036 Score=69.78 Aligned_cols=48 Identities=19% Similarity=0.314 Sum_probs=41.0
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
+...+++++|+||||+.. ....+.+.+.++|+.| ++.|..++|+|+.+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 467899999999999983 2236788999999999 88999999999986
No 197
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.55 E-value=0.00069 Score=71.18 Aligned_cols=64 Identities=13% Similarity=0.221 Sum_probs=44.3
Q ss_pred ccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCC-------------------------------CCCCCHHHHHHHHH
Q 003042 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE-------------------------------DKRPSTEVLSILND 616 (854)
Q Consensus 568 f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~-------------------------------~~~is~~~~~aL~~ 616 (854)
-...++++|.++-...+.-.|+||+|||+++.++. ...+-+.+.+.|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~ 125 (237)
T PRK11009 46 VHWVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHH
Confidence 44578999999886666679999999999972110 00122336677777
Q ss_pred cccCCCCeEEEEcCCC
Q 003042 617 LCNDPKNAVFIVSGRG 632 (854)
Q Consensus 617 L~~~~g~~v~I~TGR~ 632 (854)
+ ++.|+.++++|||+
T Consensus 126 L-~~~G~~I~iVTnR~ 140 (237)
T PRK11009 126 H-VKRGDSIYFITGRT 140 (237)
T ss_pred H-HHCCCeEEEEeCCC
Confidence 7 67777777777775
No 198
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.49 E-value=0.00042 Score=69.32 Aligned_cols=55 Identities=22% Similarity=0.210 Sum_probs=41.0
Q ss_pred CeEEEEecCCCCCCCCCC-----------------------CCCCCHHHHHHHHHcccCCCCeEEEEcCC-Cccchhhhh
Q 003042 585 SRLILLDYDGTVMPQTSE-----------------------DKRPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWF 640 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~-----------------------~~~is~~~~~aL~~L~~~~g~~v~I~TGR-~~~~l~~~~ 640 (854)
.|+++||+|+||.++... ...+-+.+.+.|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 589999999999984310 012347888889998 7889999999988 666555555
No 199
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.45 E-value=0.0032 Score=66.76 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=40.3
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccch
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l 636 (854)
++++++||+||||.. ...+.+.+.++|++| ++.|.+++|+|..+....
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~ 54 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIF 54 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChH
Confidence 358999999999998 345678999999999 889999999998766543
No 200
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=97.45 E-value=0.0001 Score=74.58 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+...+..+++++ |.+++++++|||+.+|++..+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 778899999999 9999999999999999999999997
No 201
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.44 E-value=0.0021 Score=67.82 Aligned_cols=49 Identities=22% Similarity=0.331 Sum_probs=40.7
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEc---CCCccchhhhhc
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFS 641 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~T---GR~~~~l~~~~~ 641 (854)
++||+||||++ ....+ +.+.++|+.+ +..|.+++++| ||+...+.+.+.
T Consensus 1 ~lfD~DGvL~~---~~~~~-~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~ 52 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKPI-PGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLS 52 (236)
T ss_pred CEEeCcCccCc---CCccC-cCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHH
Confidence 58999999999 55444 4889999999 88999999998 888887776664
No 202
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.40 E-value=0.00024 Score=75.74 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=48.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRP---STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
..|+|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+.+...+...++.
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~ 184 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKE 184 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHH
Confidence 469999999999999 66766 79999999999 899999999998888877777754
No 203
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.38 E-value=0.00046 Score=71.84 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~~eV 826 (854)
+....+.+++++. |++++++++|||+. +|+.+.+.+|.. .+.+.+|.. ...++|++++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5667777777641 78899999999998 899999999983 355665532 23577889999888
Q ss_pred HHHH
Q 003042 827 INLL 830 (854)
Q Consensus 827 ~~~L 830 (854)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
No 204
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.27 E-value=0.00026 Score=71.33 Aligned_cols=37 Identities=14% Similarity=0.176 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 788889999998 9999999999999999999999987
No 205
>PRK11590 hypothetical protein; Provisional
Probab=97.24 E-value=0.00098 Score=69.12 Aligned_cols=26 Identities=12% Similarity=0.188 Sum_probs=22.8
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|.+.+...+-|||.||++|++.+++.
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCC
Confidence 55677889999999999999999973
No 206
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.20 E-value=0.0011 Score=66.99 Aligned_cols=39 Identities=26% Similarity=0.343 Sum_probs=32.3
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+.|..|+..++.+.+.. ++++++|||+.||+++.+.++.
T Consensus 145 ~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 45677988888877642 6899999999999999999875
No 207
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.20 E-value=0.00019 Score=73.43 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a 789 (854)
+...+..+++.+ |++++++++|||+.+|+.+.+.+
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHhC
Confidence 778889999998 99999999999999999987653
No 208
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.19 E-value=0.00017 Score=72.67 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+......+++.+ |++++++++|||+.+|+.+.+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 556788899988 9999999999999999999999987
No 209
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.14 E-value=0.0005 Score=87.30 Aligned_cols=75 Identities=11% Similarity=0.084 Sum_probs=58.0
Q ss_pred EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-
Q 003042 734 VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK- 812 (854)
Q Consensus 734 ~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~- 812 (854)
..++.+...-.-+| +......+++.+ |+.++++++|||+.+|+...+.+|.. +++|..|..
T Consensus 206 d~iv~~~~~~~~KP----~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~ 267 (1057)
T PLN02919 206 DAIVSADAFENLKP----APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSE 267 (1057)
T ss_pred CEEEECcccccCCC----CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCH
Confidence 34445544333344 678889999999 99999999999999999999999973 567777642
Q ss_pred ----CcccceEeCCHhHH
Q 003042 813 ----PSMAKYYLDDTAEV 826 (854)
Q Consensus 813 ----~s~A~y~l~~~~eV 826 (854)
...|++++++..++
T Consensus 268 ~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 268 EILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred HHHhhCCCCEEECChHHC
Confidence 35788999998885
No 210
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.14 E-value=0.00041 Score=67.80 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
+...+..+++++ |+++ ++++|||+.+|+.+.+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 778999999999 9998 9999999999999998875
No 211
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.13 E-value=0.0028 Score=70.40 Aligned_cols=48 Identities=17% Similarity=0.357 Sum_probs=39.0
Q ss_pred CCeEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 584 NSRLILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~--------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
+.|+++||.||||....+ ..-.+.+.+.+.|..| +++|++++|+|+.+
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq~ 56 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQD 56 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECCc
Confidence 468999999999998421 1234668899999999 89999999999863
No 212
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.08 E-value=0.0018 Score=77.30 Aligned_cols=63 Identities=8% Similarity=0.169 Sum_probs=50.3
Q ss_pred HHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCC-CeEEEEcCCCccchhhhhc
Q 003042 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK-NAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 578 ~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g-~~v~I~TGR~~~~l~~~~~ 641 (854)
+.+.....+.+++..||+++..-.....+-+.+.++|+.| ++.| ++++++||.+......+.+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~ 420 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAA 420 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHH
Confidence 3445556788999999988762223556889999999999 8889 9999999999888887773
No 213
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=97.06 E-value=0.023 Score=62.07 Aligned_cols=211 Identities=20% Similarity=0.255 Sum_probs=120.8
Q ss_pred Ccccc----ccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCC--CCHHHHHHHHHcccCCCCeEEEEcCCCccchhh
Q 003042 565 GPEFR----KLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKR--PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (854)
Q Consensus 565 ~~~f~----~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~--is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~ 638 (854)
.|+|. -|++.++..--+..+.||+-||=|+||.+ +.+. .+..++.-|-+| -..|..|.|+|.=.+....+
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~---DG~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~k 198 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYE---DGASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEK 198 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCccccc---CCCCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHH
Confidence 45564 35666666655555889999999999999 4443 366777777777 68899999999998887666
Q ss_pred hhcCCc----------cc--------c-eeecCcEEEEECCC----------cceEEc--cccccc---hHHHHHHHHHH
Q 003042 639 WFSGVE----------KL--------G-LSAEHGYFTRWSKN----------SAWEIC--SLTRDF---DWKEIAEPVMK 684 (854)
Q Consensus 639 ~~~~~~----------~l--------~-liaenG~~I~~~~~----------~~~~~~--~~~~~~---~~~~~v~~~~~ 684 (854)
+...+. .+ . +-+|.-+..+++.. ..|... ..-.+. ...+.++..+.
T Consensus 199 Y~~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~ 278 (408)
T PF06437_consen 199 YEERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALR 278 (408)
T ss_pred HHHHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHH
Confidence 544321 11 1 11344455555443 123211 000000 12233333333
Q ss_pred HHhcc--CCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC------CCEEEEEc--CeEEEEeeCCcchHH
Q 003042 685 LYTET--TDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN------EPVVVKRG--QHIVEVKPQGVSKGI 754 (854)
Q Consensus 685 ~y~~~--~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~------~~~~v~~g--~~~vEI~p~gvsKg~ 754 (854)
....+ .| ..+-.|+-++-... .....+..++.+|+.-.++..+.. .+++...| +-++||-. |..
T Consensus 279 ~~~~~l~Lp-a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks~ 352 (408)
T PF06437_consen 279 DCVKRLNLP-ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KSL 352 (408)
T ss_pred HHHHHcCCC-eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cHH
Confidence 33322 23 33334444443322 111223345666766555555532 34555554 34677766 999
Q ss_pred HHHHHHHHHhh-CCCCCCeEEEEeCC-----cccHHH
Q 003042 755 VVKNLISTMRS-RGKSPDFVLCIGDD-----RSDEDM 785 (854)
Q Consensus 755 al~~ll~~l~~-~gi~~d~vlaiGDs-----~ND~~M 785 (854)
||+.+.+++.. .++.+.+++-|||- .||...
T Consensus 353 GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfka 389 (408)
T PF06437_consen 353 GVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFKA 389 (408)
T ss_pred hHHHHHHHHHhccCCCccceeeehhhhhccCCcchhh
Confidence 99998887721 37999999999993 488653
No 214
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.06 E-value=0.002 Score=71.21 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=80.8
Q ss_pred CCeEEEEecCCCCCCCCCCC--------CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 584 NSRLILLDYDGTVMPQTSED--------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~--------~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
.+|+|++|+|+||....-.+ ..+.+.+.+.|++| ++.|+.++|||..+...+...+..-+..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~~--------- 71 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKDF--------- 71 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCccc---------
Confidence 47999999999999732001 12347899999999 8899999999999887777666211000
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEE
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 735 (854)
. + +.+.+..
T Consensus 72 ------------~-----------------------~------------------------------------~~~~f~~ 80 (320)
T TIGR01686 72 ------------I-----------------------L------------------------------------QAEDFDA 80 (320)
T ss_pred ------------c-----------------------C------------------------------------cHHHeeE
Confidence 0 0 0000011
Q ss_pred EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 736 VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 736 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
+..+ .. .|...++.+++.+ |++++.+++|||+..|+.+.+.+.
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 1111 12 4999999999999 999999999999999999998864
No 215
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.96 E-value=0.00024 Score=72.94 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++++++++|||+. +|+...+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 456788899998 99999999999997 89999999986
No 216
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.93 E-value=0.0031 Score=65.11 Aligned_cols=56 Identities=14% Similarity=0.216 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
.......+++++ |++++++++|||+..|+.+.+.+|.. +|. +.+..++...|.
T Consensus 154 ~p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~~-------------~i~-----------v~~~~~~~~~l~ 206 (211)
T TIGR02247 154 DPRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGIT-------------TIK-----------VSDEEQAIHDLE 206 (211)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCCE-------------EEE-----------ECCHHHHHHHHH
Confidence 466788889998 99999999999999999999999873 443 445667766666
Q ss_pred HHH
Q 003042 832 GLA 834 (854)
Q Consensus 832 ~l~ 834 (854)
.+.
T Consensus 207 ~~~ 209 (211)
T TIGR02247 207 KAT 209 (211)
T ss_pred HHh
Confidence 654
No 217
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.81 E-value=0.0045 Score=77.42 Aligned_cols=63 Identities=13% Similarity=0.192 Sum_probs=47.2
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+.+.....+.+++-.||+++..-.-...+-+...++|++| ++.|++++++||......+.+.
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia 684 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIA 684 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHH
Confidence 34445556788888889987631113445668888999999 8899999999999988877776
No 218
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.75 E-value=0.0033 Score=74.57 Aligned_cols=58 Identities=12% Similarity=0.194 Sum_probs=45.0
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCC-eEEEEcCCCccchhhhhc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN-AVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~-~v~I~TGR~~~~l~~~~~ 641 (854)
...+.++.-.||++...-.....+-+.+.++|++| ++.|+ +++++||.+......+.+
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~ 398 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAR 398 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHH
Confidence 33466777778887652223456789999999999 89999 999999999888888773
No 219
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.60 E-value=0.0075 Score=71.94 Aligned_cols=58 Identities=10% Similarity=0.174 Sum_probs=46.7
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+...+.++++.||+++..-.-...+.+.+.++|++| ++.|++++++||......+.+.
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia 439 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVA 439 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHH
Confidence 344688999999998752113456789999999999 8899999999999988777776
No 220
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=96.57 E-value=0.0045 Score=52.79 Aligned_cols=61 Identities=16% Similarity=0.285 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------CcccceEeCC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PSMAKYYLDD 822 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s~A~y~l~~ 822 (854)
....+..+++.+ +++++++++|||+ .+|+.+.+.+|.. .+.|..|.. ...++|++++
T Consensus 6 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 6 SPGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp SHHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred cHHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECC
Confidence 455778888888 9999999999999 9999999999983 466666752 2478899998
Q ss_pred HhHH
Q 003042 823 TAEV 826 (854)
Q Consensus 823 ~~eV 826 (854)
..|+
T Consensus 72 l~e~ 75 (75)
T PF13242_consen 72 LKEA 75 (75)
T ss_dssp GGGH
T ss_pred HHhC
Confidence 7653
No 221
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.48 E-value=0.0018 Score=67.63 Aligned_cols=64 Identities=19% Similarity=0.312 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-------cccceEeCCHh
Q 003042 753 GIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-------SMAKYYLDDTA 824 (854)
Q Consensus 753 g~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-------s~A~y~l~~~~ 824 (854)
...-+.+++.+ |++|+++++|||+ .||+...+.+|.. +|.+.... ..+.+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 45778888888 9999999999998 5787999999873 45443321 46777888888
Q ss_pred HHHHHHHH
Q 003042 825 EVINLLEG 832 (854)
Q Consensus 825 eV~~~L~~ 832 (854)
++..++..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 88887764
No 222
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.48 E-value=0.018 Score=72.37 Aligned_cols=69 Identities=14% Similarity=0.238 Sum_probs=51.2
Q ss_pred HHHHhhcCCeEEEEecCC-----CCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCccccee
Q 003042 577 ASAYNKTNSRLILLDYDG-----TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDG-----TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~li 649 (854)
.+.|.+...|.+++=+++ |++..-.....+-+.+.++|+++ ++.|++++++||-.......+.. .+|+.
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~---~~Gi~ 568 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIAR---RLGMP 568 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCC
Confidence 344555567888887766 44431113456789999999999 89999999999999999999883 45554
No 223
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.42 E-value=0.0025 Score=62.19 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=26.6
Q ss_pred HHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 757 KNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 757 ~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
.+.++.+ |.+++++++|||+.+|+.+...++.
T Consensus 105 ~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 105 VKDLSLL---GRDLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred eecHHHc---CCChhcEEEEECCHHHhhcCccCEE
Confidence 3446677 8999999999999999998877664
No 224
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.40 E-value=0.24 Score=54.82 Aligned_cols=41 Identities=24% Similarity=0.368 Sum_probs=33.4
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCC----CCeEEEEcCCC
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDP----KNAVFIVSGRG 632 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~----g~~v~I~TGR~ 632 (854)
.|+||+||||.. . ..+-+...++|+.| ... |..+.++|-.+
T Consensus 2 ~~ifD~DGvL~~---g-~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~ 46 (321)
T TIGR01456 2 GFAFDIDGVLFR---G-KKPIAGASDALRRL-NRNQGQLKIPYIFLTNGG 46 (321)
T ss_pred EEEEeCcCceEC---C-ccccHHHHHHHHHH-hccccccCCCEEEEecCC
Confidence 589999999998 4 44578999999999 676 88888887443
No 225
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.38 E-value=0.061 Score=53.86 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|.-.+..+++++ ++++...++|||..+|+....++|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 666788888888 89999999999999999999999873
No 226
>PRK08238 hypothetical protein; Validated
Probab=96.38 E-value=0.011 Score=68.79 Aligned_cols=21 Identities=10% Similarity=0.124 Sum_probs=18.7
Q ss_pred CeEEEEeCCcccHHHHHHhhh
Q 003042 771 DFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 771 d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+.+.++||+.+|++|++.++.
T Consensus 140 ~~~~yvGDS~~Dlp~~~~A~~ 160 (479)
T PRK08238 140 RGFDYAGNSAADLPVWAAARR 160 (479)
T ss_pred cCeeEecCCHHHHHHHHhCCC
Confidence 446889999999999999996
No 227
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.36 E-value=0.017 Score=69.59 Aligned_cols=66 Identities=5% Similarity=0.032 Sum_probs=50.9
Q ss_pred HHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 575 HIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 575 ~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
...+.+.+...+.+++-.|++++..-.-...+-+++.++++++ ++.|++++++||-.......+..
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH
Confidence 3344555566788888888887752223456789999999999 89999999999999888888873
No 228
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=96.31 E-value=0.0035 Score=65.53 Aligned_cols=54 Identities=11% Similarity=0.099 Sum_probs=43.1
Q ss_pred CCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 732 EPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 732 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
++..++.+.....-+| ........++.| |+.|++|++|.|+.+.+...+++|..
T Consensus 128 ~f~~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 128 YFDVIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred hcchhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCCE
Confidence 3344555555555566 667788888888 99999999999999999999999983
No 229
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.30 E-value=0.0013 Score=59.76 Aligned_cols=56 Identities=21% Similarity=0.433 Sum_probs=42.0
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
|+||+||||.. ...+-+.+.++|++| ++.|.+++++|..+...-..+...+..+|+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 68999999998 445667889999999 888999999999887766666554444554
No 230
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=96.29 E-value=0.0013 Score=66.34 Aligned_cols=37 Identities=8% Similarity=0.162 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++++ |.+++++++|||+..|+...+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 677889999999 9999999999999999999999987
No 231
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.29 E-value=0.019 Score=58.04 Aligned_cols=44 Identities=23% Similarity=0.434 Sum_probs=37.5
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHH
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDED 784 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~ 784 (854)
+....-|++.-||..+..+.......|+..+.++++||+.||+.
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~C 196 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFC 196 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcC
Confidence 34445788889999999998877677999999999999999984
No 232
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.29 E-value=0.015 Score=67.94 Aligned_cols=49 Identities=20% Similarity=0.322 Sum_probs=38.3
Q ss_pred cCCeEEEEecCCCCCCCCCCC---------CCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 583 TNSRLILLDYDGTVMPQTSED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~---------~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
.+.|+++||+||||+...+.. .-+.+.+.++|++| .+.|+.++|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCc
Confidence 456999999999999732111 11457888999999 89999999999865
No 233
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.19 E-value=0.016 Score=71.42 Aligned_cols=63 Identities=6% Similarity=0.103 Sum_probs=50.0
Q ss_pred HHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 578 ~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
+.+.....+.+++=.||+++..-.-...+-++..++|++| ++.|+.++++||........+.+
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~ 603 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAG 603 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH
Confidence 4455566788888899987742113456789999999999 88999999999999998888873
No 234
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.17 E-value=0.0086 Score=61.54 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 605 ~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+-+.+.++|+.| ++.|++++++||-.......+.
T Consensus 127 ~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~ 161 (215)
T PF00702_consen 127 PLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIA 161 (215)
T ss_dssp EBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHH
T ss_pred cchhhhhhhhhhh-hccCcceeeeeccccccccccc
Confidence 3456788999998 8889999999999988888777
No 235
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.16 E-value=0.012 Score=57.24 Aligned_cols=58 Identities=19% Similarity=0.323 Sum_probs=52.0
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 581 NKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
++..+|-|++|+|.||++. .+...+++.++-+..+ ++.|+.++|+|.-+...+..+..
T Consensus 24 ~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhh
Confidence 5678999999999999996 5677899999999999 99999999999998888888873
No 236
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.93 E-value=0.026 Score=71.88 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=37.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceee
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~lia 650 (854)
...+-+++.++|+++ ++.|+.|+++|||....+..+.. .++++.
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~---~~gi~~ 609 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAK---GVGIIS 609 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCC
Confidence 345679999999999 99999999999999999999884 555543
No 237
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.90 E-value=0.012 Score=54.64 Aligned_cols=54 Identities=26% Similarity=0.409 Sum_probs=43.0
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC--CC----cccceEeCCHhHHHHHHHHH
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ--KP----SMAKYYLDDTAEVINLLEGL 833 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~--~~----s~A~y~l~~~~eV~~~L~~l 833 (854)
+.+.+.++++||+.||+.|++.+... -|+.++ .+ ..|++++.+..++++++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 55678999999999999999999873 244553 33 46899999999999887654
No 238
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.73 E-value=0.037 Score=69.96 Aligned_cols=43 Identities=16% Similarity=0.312 Sum_probs=36.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCccccee
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~li 649 (854)
...+-+++.++|+++ ++.|++++++||........+.. .+++.
T Consensus 535 ~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~---~~gi~ 577 (917)
T TIGR01116 535 LDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICR---RIGIF 577 (917)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHH---HcCCC
Confidence 456789999999999 99999999999999998888873 44543
No 239
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.59 E-value=0.0051 Score=60.91 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-----CCcccceEeCCHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-----KPSMAKYYLDDTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-----~~s~A~y~l~~~~e 825 (854)
.|+.+++.+.+ +.+...+++|||+.||++|..-+.. |-..-|+ .+..|+|++++...
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~a-------------fi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADA-------------FIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchhh-------------hhccCCceEcHhhHhccHHHHHHHHH
Confidence 69999998887 6778899999999999998876543 2111122 35678887766554
Q ss_pred HH
Q 003042 826 VI 827 (854)
Q Consensus 826 V~ 827 (854)
+.
T Consensus 221 L~ 222 (227)
T KOG1615|consen 221 LG 222 (227)
T ss_pred Hc
Confidence 43
No 240
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=95.58 E-value=0.26 Score=49.67 Aligned_cols=61 Identities=28% Similarity=0.385 Sum_probs=48.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+.+|-+++|+-|||-. +.. ..+...++|++| ++.+..|=++|.-+.++-..+.+++.++++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4578899999999998 444 557788999999 899999999998888877777665555554
No 241
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.45 E-value=0.13 Score=66.19 Aligned_cols=46 Identities=7% Similarity=0.147 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCc
Q 003042 604 KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHG 653 (854)
Q Consensus 604 ~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG 653 (854)
..+.+++.++++++ ++.|++++++||........+. .++|++..++
T Consensus 655 d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA---~~~gii~~~~ 700 (1054)
T TIGR01657 655 NPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVA---RECGIVNPSN 700 (1054)
T ss_pred cCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHH---HHcCCCCCCc
Confidence 45778999999999 8999999999999999999887 4566665443
No 242
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.40 E-value=0.074 Score=67.48 Aligned_cols=138 Identities=15% Similarity=0.235 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPV 682 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~ 682 (854)
...+-+++.++++++ ++.|++++++||-.......+. ..+|+...++..+. ..+ +
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA---~~~GI~~~~~~vi~------------G~~--~------- 631 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIA---RNCGILTFGGLAME------------GKE--F------- 631 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHH---HHcCCCCCCceEee------------HHH--h-------
Confidence 346779999999998 8999999999999999999888 35565433321110 000 0
Q ss_pred HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHH
Q 003042 683 MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762 (854)
Q Consensus 683 ~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 762 (854)
+... .++ +.+.+.+. . -+-.+.| -.|...++.+.+.
T Consensus 632 ------------------------~~l~-------~~e----l~~~i~~~--~-----Vfar~sP--e~K~~iV~~lq~~ 667 (941)
T TIGR01517 632 ------------------------RRLV-------YEE----MDPILPKL--R-----VLARSSP--LDKQLLVLMLKDM 667 (941)
T ss_pred ------------------------hhCC-------HHH----HHHHhccC--e-----EEEECCH--HHHHHHHHHHHHC
Confidence 0000 011 11122221 1 1223444 3588788776543
Q ss_pred HhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec-CC----CcccceEeC--CHhHHHHHH
Q 003042 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG-QK----PSMAKYYLD--DTAEVINLL 830 (854)
Q Consensus 763 l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG-~~----~s~A~y~l~--~~~eV~~~L 830 (854)
| .-|.++||+.||.++++.|+. ++++| .. +..|++++- +...+.+.+
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 369999999999999999984 78888 32 567889885 455555555
No 243
>PTZ00445 p36-lilke protein; Provisional
Probab=95.39 E-value=0.024 Score=57.62 Aligned_cols=157 Identities=18% Similarity=0.188 Sum_probs=93.9
Q ss_pred HHHHHHHHhhcCCeEEEEecCCCCCCCCC---CCCC---------CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 573 MHHIASAYNKTNSRLILLDYDGTVMPQTS---EDKR---------PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 573 ~~~i~~~y~~~~~klI~~DlDGTLl~~~~---~~~~---------is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+.++..+++..+|+|++|+|-||++.-+ .+.. ++++.+..+.++ ++.|+.|+|+|=-+...+..
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~~~-- 107 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELIPS-- 107 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhccc--
Confidence 45677778889999999999999997110 2222 689999999999 89999999999765433111
Q ss_pred cCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHH
Q 003042 641 SGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKE 720 (854)
Q Consensus 641 ~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~e 720 (854)
..++.+|. | .+.++..++.-. -..-++ ..+.|. |.+ |+-..
T Consensus 108 ---------~~~~~~Is--g---------------~~li~~~lk~s~---~~~~i~-----~~~~yy---p~~--w~~p~ 148 (219)
T PTZ00445 108 ---------ENRPRYIS--G---------------DRMVEAALKKSK---CDFKIK-----KVYAYY---PKF--WQEPS 148 (219)
T ss_pred ---------cCCcceec--h---------------HHHHHHHHHhcC---ccceee-----eeeeeC---Ccc--cCChh
Confidence 01111111 0 112222221100 000000 011111 111 01111
Q ss_pred HHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 721 LLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 721 l~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
....+ --++|....|..=++.+++.. |+.|+++++|=|+...++..+.+|.
T Consensus 149 ~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 149 DYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 113555666777789999998 9999999999999999999999987
No 244
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.38 E-value=0.031 Score=56.41 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=27.0
Q ss_pred HHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 608 ~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+.+.+.|+.+ ++.|..++|+||-....++.+.
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~ 123 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIA 123 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHH
Confidence 5677888887 7889999999999887777776
No 245
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.15 E-value=0.08 Score=63.99 Aligned_cols=64 Identities=6% Similarity=0.058 Sum_probs=49.4
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
.+.+.+...+.+++-.|++++..-.-...+-+++.+++++| ++.|++++++||=.......+..
T Consensus 417 ~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~ 480 (679)
T PRK01122 417 VDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAA 480 (679)
T ss_pred HHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH
Confidence 34455555677888788887742113456789999999998 99999999999999988888873
No 246
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.14 E-value=0.95 Score=51.00 Aligned_cols=259 Identities=19% Similarity=0.241 Sum_probs=133.9
Q ss_pred HHHHHHHHhcCCCCCeEEEeCcc--cchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCH
Q 003042 178 VFADKVMEVINPDEDYVWIHDYH--LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTF 255 (854)
Q Consensus 178 ~fa~~i~~~~~~~~D~vwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~ 255 (854)
..++.+. ..+| |+|..=||- =+-+...+|++.+..|+.++. +|.+|.==++|-..++.. +|.+-- .+
T Consensus 73 ~~~~~~~-~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~-if 141 (373)
T PF02684_consen 73 KLVERIK-EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLV-IF 141 (373)
T ss_pred HHHHHHH-HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeE-CC
Confidence 3344333 3467 777777776 245788999999888887776 355555447777666663 444321 12
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEE--EEE
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIV--ILG 331 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i--il~ 331 (854)
.+-..|.+ +.| +-..|-|+.. +|.-. ..+.. ...++.+ .++++ +|-
T Consensus 142 PFE~~~y~------------~~g-~~~~~VGHPl--------~d~~~-----~~~~~----~~~~~~~l~~~~~iIaLLP 191 (373)
T PF02684_consen 142 PFEPEFYK------------KHG-VPVTYVGHPL--------LDEVK-----PEPDR----AEAREKLLDPDKPIIALLP 191 (373)
T ss_pred cccHHHHh------------ccC-CCeEEECCcc--------hhhhc-----cCCCH----HHHHHhcCCCCCcEEEEeC
Confidence 22223332 111 1133434432 22110 11111 1122222 34443 233
Q ss_pred ecCccccCC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCC
Q 003042 332 VDDMDLFKG-ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (854)
Q Consensus 332 VdRld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~ 410 (854)
=+|-...|- ++..++|.+++.+++|+++ ++....+. ...+.+.+.....+.. .+++..
T Consensus 192 GSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~--------~~~~~i~~~~~~~~~~------~~~~~~--- 250 (373)
T PF02684_consen 192 GSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE--------VHEELIEEILAEYPPD------VSIVII--- 250 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH--------HHHHHHHHHHHhhCCC------CeEEEc---
Confidence 456665544 4888999999999999876 55444321 1122222222221111 122222
Q ss_pred CChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCc-----
Q 003042 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGA----- 485 (854)
Q Consensus 411 ~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a----- 485 (854)
..+...+++.||+.+++| |.+.+|++..+....-.=+.+-..- -=...+|-..+.|....+-+.
T Consensus 251 --~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~----~iak~lvk~~~isL~Niia~~~v~PE 319 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY----FIAKRLVKVKYISLPNIIAGREVVPE 319 (373)
T ss_pred --CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH----HHHHHhhcCCEeechhhhcCCCcchh
Confidence 246788899999999999 7889998887431000000000000 000011224555555554331
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHH
Q 003042 486 IRVNPWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 486 i~vnP~d~~~~A~ai~~aL~m~~~ 509 (854)
++-+--+++.+++++...|..++.
T Consensus 320 liQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 320 LIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred hhcccCCHHHHHHHHHHHhcCHHH
Confidence 344556789999999999987754
No 247
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.05 E-value=0.45 Score=51.60 Aligned_cols=168 Identities=14% Similarity=0.193 Sum_probs=112.1
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCC----CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHP----DLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p----~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
...++++--...+...+.-+|.|+...-++.- ++- ++ |.+|+ |.||..+.+.+++++ ..
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP-~l-lciIT----GKGPlkE~Y~~~I~~-----------~~ 316 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLP-SL-LCIIT----GKGPLKEKYSQEIHE-----------KN 316 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCC-cE-EEEEc----CCCchhHHHHHHHHH-----------hc
Confidence 45788899999999999999999985422211 111 22 33444 477888888888877 56
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcE--EEEccCccCCCCcc--eeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAEC--CVVNCVRDGMNLVP--YKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv--~vv~S~~EG~~Lv~--~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (854)
|+.|.+..--++-++.+.++..||. |+-|| .-|+-|.. ....-| +-|+++-.|.
T Consensus 317 ~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtS-SSGLDLPMKVVDMFGc---------------------glPvcA~~fk 374 (444)
T KOG2941|consen 317 LQHVQVCTPWLEAEDYPKLLASADLGVCLHTS-SSGLDLPMKVVDMFGC---------------------GLPVCAVNFK 374 (444)
T ss_pred ccceeeeecccccccchhHhhccccceEeeec-CcccCcchhHHHhhcC---------------------CCceeeecch
Confidence 7788888888999999999999995 55666 35555543 233333 2355555555
Q ss_pred cccccC----CCceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 477 GCSPSL----SGAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 477 G~~~~l----~~ai~vnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
|..+| .+|++++ |.+++|+.|..+.+. +..+- ++.++.+.+....+|..++-+..
T Consensus 375 -cl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l----~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 375 -CLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADEL----NQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred -hHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHH----HHHHHhhHHHHhhhHHHHHHHhh
Confidence 55555 3589986 789999999999873 22221 23344444556678877765543
No 248
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.02 E-value=0.21 Score=58.25 Aligned_cols=174 Identities=18% Similarity=0.212 Sum_probs=92.0
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPV 682 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~ 682 (854)
..+.-+.+.-.|+-| ++.|++|+..||-..+...-+. ..-.++.-+-++ +.+.. ..-...+..-
T Consensus 656 EDkLQ~dVk~tLElL-RNAgikiWMLTGDKlETA~ciA---kSs~L~sR~q~i----------hv~~~--v~sr~dah~e 719 (1051)
T KOG0210|consen 656 EDKLQDDVKPTLELL-RNAGIKIWMLTGDKLETAICIA---KSSRLFSRGQYI----------HVIRS--VTSRGDAHNE 719 (1051)
T ss_pred HHHHhhhhHhHHHHH-hhcCcEEEEEcCcchhheeeee---hhccceecCceE----------EEEEe--cCCchHHHHH
Confidence 344567788888888 8999999999998877665444 122332211111 11100 0011222223
Q ss_pred HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHH
Q 003042 683 MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762 (854)
Q Consensus 683 ~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 762 (854)
++.+....+.+.+-.. .++. ...+-..+++-+.....+.++.. +-.-.-|+..++.+-++
T Consensus 720 L~~lR~k~~~aLvi~G-~Sl~------------~cl~yye~Ef~el~~~~~aVv~C-------RctPtQKA~v~~llq~~ 779 (1051)
T KOG0210|consen 720 LNNLRRKTDCALVIDG-ESLE------------FCLKYYEDEFIELVCELPAVVCC-------RCTPTQKAQVVRLLQKK 779 (1051)
T ss_pred HHHhhcCCCcEEEEcC-chHH------------HHHHHHHHHHHHHHHhcCcEEEE-------ecChhHHHHHHHHHHHh
Confidence 3333322222221110 0100 01111222222222233333322 22234588887777665
Q ss_pred HhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC----CCcccceEeCCHhHHHHHHH
Q 003042 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ----KPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 763 l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~----~~s~A~y~l~~~~eV~~~L~ 831 (854)
- | ..+.||||+.||..|.+.|+.. +++ +|+ +.-+|+|-+.....|.++|-
T Consensus 780 t---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 780 T---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred h---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHHHHHHHhh
Confidence 4 3 6899999999999999998753 333 232 34688888877777777764
No 249
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.00 E-value=0.083 Score=67.88 Aligned_cols=185 Identities=15% Similarity=0.149 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccc-hHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDF-DWKEIAEP 681 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~-~~~~~v~~ 681 (854)
...+-+.+.++|+.| ++.|++++++||=.......+.. ..+++..+.-.+...+... .+. ...+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~---~~~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGY---SCRLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHH---HhCCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 345667888888888 88999999999999998888873 4455544433222221110 000 00111111
Q ss_pred HHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHH
Q 003042 682 VMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIS 761 (854)
Q Consensus 682 ~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~ 761 (854)
.......... .....+...+...-... ......++.+++.+.+......+ +-.+.| -.|+..++.+-+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~~l----~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP--~qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGKSL----GYALDEELEKEFLQLALKCKAVI-----CCRVSP--SQKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccHHH----HHHHhhHHHHHHHHHHhhCCEEE-----EeCCCH--HHHHHHHHHHHh
Confidence 1100000000 00001111111111100 00000111223333332222112 223344 458888887765
Q ss_pred HHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe-cC----CCcccceEeCCHhHHHHHH
Q 003042 762 TMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV-GQ----KPSMAKYYLDDTAEVINLL 830 (854)
Q Consensus 762 ~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v-G~----~~s~A~y~l~~~~eV~~~L 830 (854)
.. ..-|+++||+.||.+|++.|+. ||.+ |. +...|+|.+.+...+.++|
T Consensus 766 ~~------~~~vl~iGDG~ND~~mlk~AdV--------------GIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST------GKTTLAIGDGANDVSMIQEADV--------------GVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC------CCeEEEEeCCCccHHHHhhcCe--------------eeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 2479999999999999999985 4433 32 3467999988766666655
No 250
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=94.79 E-value=0.11 Score=62.65 Aligned_cols=67 Identities=6% Similarity=0.076 Sum_probs=48.5
Q ss_pred HHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 574 HHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 574 ~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
+...+.+.+...+.++.-.|++++..-.-...+-+++.++++++ ++.|++++++||-.......+.+
T Consensus 410 ~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~ 476 (673)
T PRK14010 410 DALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAK 476 (673)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH
Confidence 34444555555566655457776641113456789999999999 89999999999999998888874
No 251
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.71 E-value=0.073 Score=54.84 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=46.1
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC---cccc-e-EeCC
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP---SMAK-Y-YLDD 822 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~---s~A~-y-~l~~ 822 (854)
.+-.|...++.+ +.. | .+++++||+.||++|++.++. +|++..++ ..|+ + ++.+
T Consensus 129 ~~~~K~~~l~~l-~~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~ 187 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHT 187 (203)
T ss_pred CcchHHHHHHHH-Hhh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccC
Confidence 345688888877 444 4 379999999999999999986 46666654 2222 2 4567
Q ss_pred HhHHHHHHHHH
Q 003042 823 TAEVINLLEGL 833 (854)
Q Consensus 823 ~~eV~~~L~~l 833 (854)
.+|++..|...
T Consensus 188 ~~~~~~~~~~~ 198 (203)
T TIGR02137 188 YEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHHH
Confidence 78877777654
No 252
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.59 E-value=0.049 Score=56.77 Aligned_cols=51 Identities=18% Similarity=0.285 Sum_probs=40.9
Q ss_pred CCeEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccc
Q 003042 584 NSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~ 635 (854)
.+-+++||+|.|+++..+ .....-+.++++++.+ ++.|+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHH
Confidence 467899999999997220 1234558899999999 89999999999999765
No 253
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.58 E-value=0.017 Score=57.03 Aligned_cols=46 Identities=24% Similarity=0.385 Sum_probs=32.6
Q ss_pred eEEEEecCCCCCCCCCCCC---------CCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 586 RLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~---------~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
|+.+||+||||+...+... -..+.+.++|++| .+.|+.++|+|--+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTNQ~ 55 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTNQS 55 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE-C
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeCcc
Confidence 6899999999997432111 1345799999999 88999999998653
No 254
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.55 E-value=0.76 Score=51.05 Aligned_cols=277 Identities=15% Similarity=0.172 Sum_probs=143.9
Q ss_pred hcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcc--cchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh
Q 003042 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH--LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL 244 (854)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l 244 (854)
..|..|++.=+. +.+. +| |++..=|+- =..|...||+..|++||..+.- ||--.|| |.|...+..
T Consensus 69 ~llk~~~~~~~~----i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVWAWr--~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRY----ILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVWAWR--PKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHH----HHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---cceeeec--hhhHHHHHH-
Confidence 446666554333 3322 56 676665654 2457889999999999998873 4444444 677444444
Q ss_pred hcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-
Q 003042 245 LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF- 323 (854)
Q Consensus 245 l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 323 (854)
.+|++.--.+ +-..|.+. .|+. ..|-|++. .|.-.+. ++ .+..|+++
T Consensus 136 -~~D~lLailP-FE~~~y~k----~g~~---------~~yVGHpl--------~d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILP-FEPAFYDK----FGLP---------CTYVGHPL--------ADEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecC-CCHHHHHh----cCCC---------eEEeCChh--------hhhcccc-----cc----HHHHHHHhC
Confidence 2555432222 11112210 0111 22333322 1211111 11 12244444
Q ss_pred ---CCCEEEEEec-C-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 003042 324 ---DGKIVILGVD-D-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (854)
Q Consensus 324 ---~~~~iil~Vd-R-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~ 398 (854)
..+.+.+-.| | =+-..-.+-.++|++++.+++|+++ ++.-..+ +.++.++.+... .
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~------- 244 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---W------- 244 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---c-------
Confidence 3444444443 3 3345566778889999999999987 5544432 233333333221 1
Q ss_pred CCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe-cC--
Q 003042 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EF-- 475 (854)
Q Consensus 399 ~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~-- 475 (854)
....+.+++ ...+....+.+||+.+..| |.+.+|++.|+. |.|++ ..
T Consensus 245 ~~~~~~~~~----~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~---------------------P~Vv~Yk~~~ 294 (381)
T COG0763 245 EVAGLSLIL----IDGEKRKAFAAADAALAAS-----GTATLEAALAGT---------------------PMVVAYKVKP 294 (381)
T ss_pred cccCceEEe----cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCC---------------------CEEEEEeccH
Confidence 011122222 2357888999999999998 889999999843 33332 22
Q ss_pred --------------ccccccCCCceEe-----CCCCHHHHHHHHHHHhcCCHH--HHHHHHHHHhccccccChHHHHHHH
Q 003042 476 --------------IGCSPSLSGAIRV-----NPWNVDAVADAMDSALQMENQ--EKILRHEKHYKYISSHDVAYWAKSI 534 (854)
Q Consensus 476 --------------~G~~~~l~~ai~v-----nP~d~~~~A~ai~~aL~m~~~--er~~r~~~~~~~v~~~~~~~W~~~~ 534 (854)
.+....+-+-.+| .--.++.+|+++...+..+.. +.......+++++.+..+..-+.+.
T Consensus 295 it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~ 374 (381)
T COG0763 295 ITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQA 374 (381)
T ss_pred HHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 2222222221111 112368999999999887732 2233444455555555355555544
Q ss_pred HHH
Q 003042 535 DQD 537 (854)
Q Consensus 535 l~~ 537 (854)
+-+
T Consensus 375 vl~ 377 (381)
T COG0763 375 VLE 377 (381)
T ss_pred HHH
Confidence 433
No 255
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.50 E-value=0.25 Score=63.76 Aligned_cols=46 Identities=11% Similarity=0.143 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecC
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaen 652 (854)
...+-+.+.+++++| ++.|+.++++||-.......+.. ..+++..+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~---s~~Ll~~~ 769 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGY---SSKLLTNK 769 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHH---HhCCCCCC
Confidence 345778899999999 89999999999999988887763 34454443
No 256
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=94.35 E-value=0.04 Score=56.36 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=37.6
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.+-.|...++.+++.. ++++++++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899999887 89999999999999999999999973
No 257
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.29 E-value=0.31 Score=61.47 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=35.7
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
...+-+++.++++++ ++.|++++++||-.......+.+ ++|+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~---~lGI 589 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCH---EVGL 589 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH---HcCC
Confidence 345779999999998 89999999999999999988884 4555
No 258
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=94.28 E-value=0.009 Score=58.65 Aligned_cols=99 Identities=16% Similarity=0.277 Sum_probs=48.7
Q ss_pred HHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh-----HHHHHH-hhcCCeEeecC
Q 003042 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-----DEILKS-LLNSDLIGFHT 254 (854)
Q Consensus 181 ~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r-----~eil~~-ll~~dligf~t 254 (854)
.++++..+| |+|++|.++...+...-.. +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334455566 8999999887765543332 789999999887531111111111 111112 23577776655
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHH
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFE 304 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~ 304 (854)
..-++.+.+ .|+. ..++.++|+|||.+.|+
T Consensus 148 ~~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 544444432 1211 13688999999999874
No 259
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.21 E-value=0.06 Score=53.40 Aligned_cols=60 Identities=25% Similarity=0.396 Sum_probs=41.4
Q ss_pred ccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCC--eEEEEcC
Q 003042 566 PEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN--AVFIVSG 630 (854)
Q Consensus 566 ~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~--~v~I~TG 630 (854)
+++..++.+.- ..++..+|.++||.|.||+.. ....++++..+.++++ ++.+. .|+|+|.
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l-~~~~~~~~v~IvSN 85 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL-KKQFGKDRVLIVSN 85 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH-HHHCCCCeEEEEEC
Confidence 34555555431 135678999999999999963 5678899999999998 43332 3554443
No 260
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=94.20 E-value=0.2 Score=53.16 Aligned_cols=91 Identities=20% Similarity=0.438 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhccC------CCeEEEEecCC-C----CChhhhhc--CC
Q 003042 170 QAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRFH------RVKVGFFLHSP-F----PSSEIYRT--LP 235 (854)
Q Consensus 170 ~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~~------~~~i~~flH~p-f----P~~e~~~~--lp 235 (854)
..|.-.++.-++.+... .+| |+|++||.|-.++|.+|++... ++|+.|+.|-. | |. +.+.. +|
T Consensus 114 ~rf~~fs~a~le~~~~l~~~p--DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~ 190 (245)
T PF08323_consen 114 ERFAFFSRAALELLKKLGWKP--DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLP 190 (245)
T ss_dssp HHHHHHHHHHHHHHCTCT-S---SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-G
T ss_pred HHHHHHHHHHHHHHHhhCCCC--CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCC
Confidence 34444444444433331 234 9999999999999999999864 69999999953 2 32 22221 33
Q ss_pred Ch--------------HHHHHHhhcCCeEeecCHHHHHHHHH
Q 003042 236 VR--------------DEILKSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 236 ~r--------------~eil~~ll~~dligf~t~~~~~~Fl~ 263 (854)
+. .-+--|+..||.|..-++.|++.-++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 21 24456899999999999999987554
No 261
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=93.97 E-value=0.19 Score=64.28 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=37.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceee
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~lia 650 (854)
...+-+++.++++++ ++.|++++++||........+. ..+|+..
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA---~~~Gi~~ 687 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIA---QEVGIIP 687 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHH---HHcCCCC
Confidence 345778999999998 9999999999999999999888 4556643
No 262
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=93.94 E-value=0.38 Score=60.53 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=35.5
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
...+-+++.++++++ ++.|++++++||-.......+.+ ++|+
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~---~lGI 554 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQ---EVGI 554 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH---HcCC
Confidence 345779999999998 99999999999999998888874 4555
No 263
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=93.85 E-value=0.23 Score=61.44 Aligned_cols=167 Identities=16% Similarity=0.179 Sum_probs=98.8
Q ss_pred HHHhhcCCeEEEEec---CC--CCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecC
Q 003042 578 SAYNKTNSRLILLDY---DG--TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652 (854)
Q Consensus 578 ~~y~~~~~klI~~Dl---DG--TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaen 652 (854)
+.+.....|.+++=+ ++ +++..-.-...+-+++.++++++ ++.|++++++||........+.+ ++|+...
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~---~lGI~~~- 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETAR---RLGLGTN- 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCC-
Confidence 334445567777755 33 44431123456789999999998 89999999999999999999884 4554210
Q ss_pred cEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003042 653 GYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE 732 (854)
Q Consensus 653 G~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 732 (854)
+ .... .+ . .|.. ....+ .+++.+ .+.+.
T Consensus 485 ---~-----------~~~~---------~l----~---~~~~-----------~~~~~-------~~~~~~----~~~~~ 512 (755)
T TIGR01647 485 ---I-----------YTAD---------VL----L---KGDN-----------RDDLP-------SGELGE----MVEDA 512 (755)
T ss_pred ---C-----------cCHH---------Hh----c---CCcc-----------hhhCC-------HHHHHH----HHHhC
Confidence 0 0000 00 0 0000 00000 112222 22221
Q ss_pred CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 733 PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 733 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
. -+-++.|. +|...++.+.+. | .-|.++||+.||.+.++.|+. ++++|..
T Consensus 513 ~-------vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~g 562 (755)
T TIGR01647 513 D-------GFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGA 562 (755)
T ss_pred C-------EEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCC
Confidence 1 23345553 587777776542 4 469999999999999999974 6778753
Q ss_pred ----CcccceEeC--CHhHHHHHHH
Q 003042 813 ----PSMAKYYLD--DTAEVINLLE 831 (854)
Q Consensus 813 ----~s~A~y~l~--~~~eV~~~L~ 831 (854)
+..|+.++- +...+...++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 567888773 4555554443
No 264
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=93.78 E-value=0.34 Score=61.07 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=86.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPV 682 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~ 682 (854)
...+-+++.++++++ ++.|++++++||=.......+.+ ++|+.. +.. +.
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~---~lGI~~--~~v------------i~------------- 596 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICR---EVGLEP--GEP------------LL------------- 596 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCC--CCc------------cc-------------
Confidence 346779999999998 99999999999999999988884 455521 100 00
Q ss_pred HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHH
Q 003042 683 MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762 (854)
Q Consensus 683 ~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 762 (854)
|..++ ..+ .+++.+ ...+. .-+-.+.| -+|...++.+.+.
T Consensus 597 ---------G~el~-----------~~~-------~~el~~----~v~~~-------~VfAr~sP--e~K~~iV~~Lq~~ 636 (903)
T PRK15122 597 ---------GTEIE-----------AMD-------DAALAR----EVEER-------TVFAKLTP--LQKSRVLKALQAN 636 (903)
T ss_pred ---------hHhhh-----------hCC-------HHHHHH----HhhhC-------CEEEEeCH--HHHHHHHHHHHhC
Confidence 00000 000 011211 12221 12233445 3487777776542
Q ss_pred HhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEe--CCHhHHHHHHH
Q 003042 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 763 l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l--~~~~eV~~~L~ 831 (854)
| .-|.++||+.||-++++.|+ ++++||.. +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 46999999999999999997 47888853 57888887 34555544443
No 265
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=93.65 E-value=0.78 Score=52.40 Aligned_cols=139 Identities=13% Similarity=0.133 Sum_probs=79.0
Q ss_pred EEEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh---------cc
Q 003042 327 IVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL---------NF 396 (854)
Q Consensus 327 ~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~---------~~ 396 (854)
.+++.-.| =+..++++..++|++++.++ |+ +.++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 45566677 44567888999999988655 44 3355444332 2333444333221 0000 00
Q ss_pred CCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc
Q 003042 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (854)
Q Consensus 397 ~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (854)
. ...+.++. ...+..++|+.||++|..| |-+..|+++++. |.|+--+.
T Consensus 277 ~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~---------------------P~Ilip~~ 324 (396)
T TIGR03492 277 Q---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK---------------------PVIQLPGK 324 (396)
T ss_pred c---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC---------------------CEEEEeCC
Confidence 0 00122222 2467899999999999886 345589998843 44443321
Q ss_pred cc------ccc---C-CCceEeCCCCHHHHHHHHHHHhcCCH
Q 003042 477 GC------SPS---L-SGAIRVNPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 477 G~------~~~---l-~~ai~vnP~d~~~~A~ai~~aL~m~~ 508 (854)
+- .+. + .+++.+...+.+.+++++.++|+.++
T Consensus 325 ~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~~ 366 (396)
T TIGR03492 325 GPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADPE 366 (396)
T ss_pred CCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCHH
Confidence 11 111 1 34566666778999999999988643
No 266
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.28 E-value=0.087 Score=51.50 Aligned_cols=55 Identities=13% Similarity=0.315 Sum_probs=39.9
Q ss_pred EEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccc---hhhhhcC
Q 003042 587 LILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS---LGNWFSG 642 (854)
Q Consensus 587 lI~~DlDGTLl~~~~--------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~---l~~~~~~ 642 (854)
++++|+||||+.... ......+.+.+..+++ +++|+.++-+|+|+... .+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHH
Confidence 489999999998310 0013457778888998 89999999999999653 4445543
No 267
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.27 E-value=0.072 Score=57.02 Aligned_cols=54 Identities=28% Similarity=0.418 Sum_probs=40.4
Q ss_pred cCCeEEEEecCCCCCCCCC-------C----------------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchh
Q 003042 583 TNSRLILLDYDGTVMPQTS-------E----------------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~-------~----------------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~ 637 (854)
.+...|+||+|+|+++..+ . ...+-+.+.+.|+.+ .+.|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 4568999999999996321 0 112346778899998 7899999999999865544
No 268
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=93.27 E-value=0.71 Score=49.18 Aligned_cols=57 Identities=18% Similarity=0.268 Sum_probs=42.2
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
.-.|.+||.++..++.++ |..|+.+++|-|+...+.-.+.+=.. .+-..+++.+...
T Consensus 157 ft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred EeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 455788999999999999 99999999999997666555544221 1224677877654
No 269
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.26 E-value=0.39 Score=58.35 Aligned_cols=138 Identities=17% Similarity=0.283 Sum_probs=95.1
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEE
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFT 656 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I 656 (854)
...+.....-++++-.||.++..-.-...+-++..+++++| ++.|+++++.||-.....+.+.+ ++|+.
T Consensus 509 ~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L-~~~Gi~~~mLTGDn~~~A~~iA~---~lGId------- 577 (713)
T COG2217 509 IEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAAL-KALGIKVVMLTGDNRRTAEAIAK---ELGID------- 577 (713)
T ss_pred HHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH---HcChH-------
Confidence 34444444448999999977641112446778999999999 89999999999998888877763 23220
Q ss_pred EECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 657 RWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
+++. +.-|+
T Consensus 578 ---------------------------~v~A--------------------ellPe------------------------ 586 (713)
T COG2217 578 ---------------------------EVRA--------------------ELLPE------------------------ 586 (713)
T ss_pred ---------------------------hhec--------------------cCCcH------------------------
Confidence 0000 01111
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
+|...++.+.++ | ..|+++||+.||-+.+..++ +++++|..
T Consensus 587 --------------dK~~~V~~l~~~----g---~~VamVGDGINDAPALA~Ad--------------VGiAmG~GtDvA 631 (713)
T COG2217 587 --------------DKAEIVRELQAE----G---RKVAMVGDGINDAPALAAAD--------------VGIAMGSGTDVA 631 (713)
T ss_pred --------------HHHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcC--------------eeEeecCCcHHH
Confidence 266666766543 3 57999999999999999997 57888874
Q ss_pred CcccceEe--CCHhHHHHHHH
Q 003042 813 PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 813 ~s~A~y~l--~~~~eV~~~L~ 831 (854)
...|+.++ ++...|.+.++
T Consensus 632 ~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 632 IEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred HHhCCEEEecCCHHHHHHHHH
Confidence 46788876 46777777665
No 270
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=93.15 E-value=0.38 Score=47.63 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=33.0
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
-+-|.+|+..++.+.+ +++.++++|||..|++..+.....
T Consensus 142 s~fG~dK~~vI~~l~e-------~~e~~fy~GDsvsDlsaaklsDll 181 (220)
T COG4359 142 SQFGHDKSSVIHELSE-------PNESIFYCGDSVSDLSAAKLSDLL 181 (220)
T ss_pred cccCCCcchhHHHhhc-------CCceEEEecCCcccccHhhhhhhH
Confidence 3458899999988865 357799999999999998887763
No 271
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.12 E-value=0.29 Score=57.68 Aligned_cols=59 Identities=8% Similarity=0.139 Sum_probs=41.7
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
....+.+++=+|++++..-.....+-+++.++++.| ++.|+.++++||........+..
T Consensus 324 ~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 324 QSGLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred hCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH
Confidence 344455555566665532113445678888888888 77899999999999988887763
No 272
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.61 E-value=0.46 Score=60.06 Aligned_cols=40 Identities=13% Similarity=0.255 Sum_probs=34.3
Q ss_pred CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 602 ~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
....|-+++.++++.+ ++.|++++++||=.......+..+
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~ 583 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKE 583 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHH
Confidence 3446778999999998 999999999999999999888743
No 273
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.33 E-value=0.18 Score=53.69 Aligned_cols=50 Identities=26% Similarity=0.372 Sum_probs=38.2
Q ss_pred CeEEEEecCCCCCCCCC-----------------C-------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccc
Q 003042 585 SRLILLDYDGTVMPQTS-----------------E-------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~-----------------~-------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~ 635 (854)
.-+++||+|+|+++..+ . ....-+.+++.++.+ ++.|..|+++|||+-..
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 47899999999994110 0 123347788889998 89999999999998654
No 274
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=91.85 E-value=8.1 Score=43.80 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=48.4
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc----cc
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC----SP 480 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~ 480 (854)
+.+.+.+++. +++..||++| .+-|+| +..|+++++. |+|+.-+.+- +.
T Consensus 290 v~~~~~~p~~---~ll~~~d~~I---~hgG~~-t~~eal~~Gv---------------------P~v~~P~~~dQ~~~a~ 341 (401)
T cd03784 290 VRVVDFVPHD---WLLPRCAAVV---HHGGAG-TTAAALRAGV---------------------PQLVVPFFGDQPFWAA 341 (401)
T ss_pred eEEeCCCCHH---HHhhhhheee---ecCCch-hHHHHHHcCC---------------------CEEeeCCCCCcHHHHH
Confidence 4455666655 4578899998 456765 6689999843 5555544442 11
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhc
Q 003042 481 SL---SGAIRVNPW--NVDAVADAMDSALQ 505 (854)
Q Consensus 481 ~l---~~ai~vnP~--d~~~~A~ai~~aL~ 505 (854)
.+ .-|+.+++. +.+++++++.++|+
T Consensus 342 ~~~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 342 RVAELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHHHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 12 225666554 68999999999987
No 275
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=91.73 E-value=0.28 Score=50.88 Aligned_cols=64 Identities=17% Similarity=0.254 Sum_probs=44.1
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC------CCcccceEeCCH
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ------KPSMAKYYLDDT 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~------~~s~A~y~l~~~ 823 (854)
..|..+++.+. ..++.+++|||+.||+.|++.++.. ++-+. ....+-+..++.
T Consensus 143 ~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~f 201 (214)
T TIGR03333 143 CCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQDF 201 (214)
T ss_pred CCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCCH
Confidence 45777766543 3567899999999999999998752 22221 122344446888
Q ss_pred hHHHHHHHHHH
Q 003042 824 AEVINLLEGLA 834 (854)
Q Consensus 824 ~eV~~~L~~l~ 834 (854)
.+|.+.|+...
T Consensus 202 ~di~~~l~~~~ 212 (214)
T TIGR03333 202 YDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHh
Confidence 99988887654
No 276
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=91.64 E-value=20 Score=40.18 Aligned_cols=138 Identities=15% Similarity=0.171 Sum_probs=84.6
Q ss_pred CEEEEEecCcccc-CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 326 KIVILGVDDMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 326 ~~iil~VdRld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
+-+++..-|-.-. +++...+.|+.++++++|+.. +| .|..-+ +-+++.. +.+++ -.+-
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~e~~----------~~~L~---~~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVRELV----------LKRLK---NVER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhhHHH----------HHHhC---CCCc
Confidence 4566677777665 999999999999999998754 33 222112 2222222 11222 1223
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS- 483 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 483 (854)
+.+-.++...+...|...|-+.+--| |=.--||-.-+. -++++=+.+.=.+.+.
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~--------------------Pvl~lR~~TERPE~v~a 318 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK--------------------PVLVLRDTTERPEGVEA 318 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC--------------------cEEeeccCCCCccceec
Confidence 44555799999999999997665544 112234444421 2444445554455553
Q ss_pred C-ceEeCCCCHHHHHHHHHHHhcCCHHH
Q 003042 484 G-AIRVNPWNVDAVADAMDSALQMENQE 510 (854)
Q Consensus 484 ~-ai~vnP~d~~~~A~ai~~aL~m~~~e 510 (854)
| .++|+ .|.+.+.+++.+++++++..
T Consensus 319 gt~~lvg-~~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 319 GTNILVG-TDEENILDAATELLEDEEFY 345 (383)
T ss_pred CceEEeC-ccHHHHHHHHHHHhhChHHH
Confidence 3 35665 57899999999999887654
No 277
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.55 E-value=0.031 Score=58.64 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=44.3
Q ss_pred cCCeEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhh
Q 003042 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~ 639 (854)
-+...|+||+|+|+++... .....-+.+++.++.+ .+.|..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 4578999999999986110 0112235577888888 899999999999998754444
Q ss_pred hcCCcccce
Q 003042 640 FSGVEKLGL 648 (854)
Q Consensus 640 ~~~~~~l~l 648 (854)
...+...|+
T Consensus 149 ~~nL~~~G~ 157 (229)
T PF03767_consen 149 EKNLKKAGF 157 (229)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHcCC
Confidence 433334443
No 278
>PLN02811 hydrolase
Probab=91.41 E-value=0.24 Score=51.48 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHhhCC---CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceEeCCHh
Q 003042 752 KGIVVKNLISTMRSRG---KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYYLDDTA 824 (854)
Q Consensus 752 Kg~al~~ll~~l~~~g---i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~~~ 824 (854)
+......+++.+ | ++++++++|||+..|+.+.+.+|.. +++|..|... ..+++++++..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMS-----------VVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCe-----------EEEEeCCCCcHhhhhchhhHhcCHh
Confidence 667888888888 6 8999999999999999999999973 5677666421 24566666665
Q ss_pred H
Q 003042 825 E 825 (854)
Q Consensus 825 e 825 (854)
+
T Consensus 205 e 205 (220)
T PLN02811 205 D 205 (220)
T ss_pred h
Confidence 5
No 279
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.35 E-value=0.32 Score=51.34 Aligned_cols=65 Identities=11% Similarity=0.028 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC--------cccceEeCC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP--------SMAKYYLDD 822 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~--------s~A~y~l~~ 822 (854)
+......+++.+ |++++++++|||+ ..|+...+.+|.. ++.|.-+..+ ..+++.+.+
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~-----------~i~v~~~~~~~~~~~~~~~~p~~~i~~ 230 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGMQ-----------ACWINPENGDLMQTWDSRLLPHIEISR 230 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCCe-----------EEEEcCCCccccccccccCCCCEEECC
Confidence 677888888888 9999999999999 5999999999973 2333332221 245667777
Q ss_pred HhHHHHHH
Q 003042 823 TAEVINLL 830 (854)
Q Consensus 823 ~~eV~~~L 830 (854)
..++..+|
T Consensus 231 l~el~~~~ 238 (238)
T PRK10748 231 LASLTSLI 238 (238)
T ss_pred HHHHHhhC
Confidence 77766543
No 280
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=90.92 E-value=12 Score=42.34 Aligned_cols=72 Identities=13% Similarity=0.104 Sum_probs=49.0
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL- 482 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 482 (854)
.+.+.++++..++.++++.|+++|-.|- =++ .||.+.+. |+|. . |-.++.
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~---------------------Pvv~--l-~~R~e~~ 313 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGV---------------------PTIN--I-GTRQKGR 313 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCC---------------------CEEe--e-cCCchhh
Confidence 4566778999999999999999985441 122 69999833 3331 1 223333
Q ss_pred C-C-c-eEeCCCCHHHHHHHHHHHhc
Q 003042 483 S-G-A-IRVNPWNVDAVADAMDSALQ 505 (854)
Q Consensus 483 ~-~-a-i~vnP~d~~~~A~ai~~aL~ 505 (854)
. | . +.| +.|.+++.+++.+++.
T Consensus 314 ~~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 314 LRADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hhcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 2 3 3 446 7789999999999653
No 281
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=90.90 E-value=0.48 Score=49.75 Aligned_cols=46 Identities=28% Similarity=0.395 Sum_probs=37.9
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
-|.+.-||..++.+++...+.|...+.|++|||+.||......++.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 3567889999999998754557889999999999999987776543
No 282
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=89.82 E-value=38 Score=37.91 Aligned_cols=260 Identities=15% Similarity=0.079 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh--cCC
Q 003042 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSD 248 (854)
Q Consensus 171 ~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll--~~d 248 (854)
..-.+=..|++.+ +..+| |+|.||.=-.-.+..-+-...-++||+..--= -=+.|. +-|.-+|+.|-+. -||
T Consensus 51 ~~~~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~HieaG-lRs~d~--~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 51 STGLAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHIEAG-LRSGDR--TEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S-T--TSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEecCC-CCcccc--CCCCchhhhhhhhhhhhh
Confidence 3444444555544 44578 89999988887777777666667776533210 000111 1244455555431 266
Q ss_pred eEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEE
Q 003042 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIV 328 (854)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 328 (854)
+----|..+.++.++ .|.+. ++ +. .+-.+++|.-........+... ...+.....++.+
T Consensus 125 lhf~~t~~~~~~L~~-----~G~~~--~r----I~--------~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~i 183 (346)
T PF02350_consen 125 LHFAPTEEARERLLQ-----EGEPP--ER----IF--------VVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYI 183 (346)
T ss_dssp EEEESSHHHHHHHHH-----TT--G--GG----EE--------E---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEE
T ss_pred hhccCCHHHHHHHHh-----cCCCC--Ce----EE--------EEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEE
Confidence 666667777777665 24321 11 11 1234577754333211111110 1122222344455
Q ss_pred EEEecCcccc---CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEE
Q 003042 329 ILGVDDMDLF---KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (854)
Q Consensus 329 il~VdRld~~---KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~ 405 (854)
++..=|.... ......+.+++.+.+. +++. +|....++ + ...+.+.+...+ +..+.
T Consensus 184 Lvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~----p---~~~~~i~~~l~~---------~~~v~ 242 (346)
T PF02350_consen 184 LVTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN----P---RGSDIIIEKLKK---------YDNVR 242 (346)
T ss_dssp EEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S-----H---HHHHHHHHHHTT----------TTEE
T ss_pred EEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC----c---hHHHHHHHHhcc---------cCCEE
Confidence 5555454443 3466777788888777 4433 44444221 1 222232222211 11244
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--- 482 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 482 (854)
+ ..+++..++.++++.|+++|-.|- | +..||..++. |+|.=...|-.++.
T Consensus 243 ~-~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~---------------------P~v~iR~~geRqe~r~~ 295 (346)
T PF02350_consen 243 L-IEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK---------------------PVVNIRDSGERQEGRER 295 (346)
T ss_dssp E-E----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-----------------------EEECSSS-S-HHHHHT
T ss_pred E-ECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC---------------------eEEEecCCCCCHHHHhh
Confidence 4 447899999999999999987772 2 2338888843 55555555655554
Q ss_pred CCceEeCCCCHHHHHHHHHHHhcC
Q 003042 483 SGAIRVNPWNVDAVADAMDSALQM 506 (854)
Q Consensus 483 ~~ai~vnP~d~~~~A~ai~~aL~m 506 (854)
..+++|. .|.+++.+||.+++..
T Consensus 296 ~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 296 GSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp TSEEEET-SSHHHHHHHHHHHHH-
T ss_pred cceEEeC-CCHHHHHHHHHHHHhC
Confidence 3356664 8999999999999976
No 283
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=89.80 E-value=1.6 Score=50.43 Aligned_cols=130 Identities=16% Similarity=0.222 Sum_probs=70.5
Q ss_pred ccccCchHHHhhhCCchHHHH--HHHHHHHc---CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003042 295 PVGIHMGQFESIMSLDVTGQK--VKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (854)
Q Consensus 295 p~GId~~~~~~~~~~~~~~~~--~~~l~~~~---~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 369 (854)
.+|.-..+....+...+.... +...|+.| .+..++.+..++ .|=-+..+..+.++|++-|+-+ |++...
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~ 322 (468)
T PF13844_consen 249 QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRF 322 (468)
T ss_dssp EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEET
T ss_pred ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeC
Confidence 567776666544333221110 11234555 466666666765 4566889999999999999765 666554
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 370 p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
+. .+ ++.+.+.+.+ .|. .-.-++| .+..+.+|..+.|+.+|||+-|..+-|- .+.+||+++
T Consensus 323 ~~--~~------~~~l~~~~~~----~Gv-~~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG~-TTt~dALwm 383 (468)
T PF13844_consen 323 PA--SG------EARLRRRFAA----HGV-DPDRIIF-SPVAPREEHLRRYQLADICLDTFPYNGG-TTTLDALWM 383 (468)
T ss_dssp ST--TH------HHHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS--S-HHHHHHHHH
T ss_pred CH--HH------HHHHHHHHHH----cCC-ChhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCCc-HHHHHHHHc
Confidence 43 11 1223332222 232 2233554 4467889999999999999999877774 477899998
No 284
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=88.87 E-value=3.7 Score=52.19 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=31.0
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+..-.-|+..++.+.+. ..--+++|||+.||..|++.|+.
T Consensus 776 R~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhV 815 (1151)
T KOG0206|consen 776 RVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHV 815 (1151)
T ss_pred cCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCc
Confidence 33345599898888443 34579999999999999998875
No 285
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=87.94 E-value=1.1 Score=54.78 Aligned_cols=46 Identities=11% Similarity=0.146 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCc
Q 003042 604 KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHG 653 (854)
Q Consensus 604 ~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG 653 (854)
..+-+++..+|++| .+.+++.+.|||-.....-...+ +.|++.+.+
T Consensus 704 NkLK~~T~~VI~eL-~~AnIRtVMcTGDNllTaisVak---eCgmi~p~~ 749 (1140)
T KOG0208|consen 704 NKLKEETKRVIDEL-NRANIRTVMCTGDNLLTAISVAK---ECGMIEPQV 749 (1140)
T ss_pred cccccccHHHHHHH-HhhcceEEEEcCCchheeeehhh---cccccCCCC
Confidence 44556777778887 77899999999998877666653 445554444
No 286
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=87.82 E-value=0.42 Score=47.56 Aligned_cols=45 Identities=16% Similarity=0.276 Sum_probs=29.7
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
.++||.|. +|-.-.+.|.+.. |++++++++|=|...-.+--+..|
T Consensus 100 ~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lG 144 (169)
T PF12689_consen 100 DYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLG 144 (169)
T ss_dssp CEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT
T ss_pred chhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecC
Confidence 34778874 8999999999988 999999999998654444444444
No 287
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=87.14 E-value=0.31 Score=51.45 Aligned_cols=31 Identities=13% Similarity=0.039 Sum_probs=20.6
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L 617 (854)
++|+|+||+||||++ +...+.....++++.+
T Consensus 9 ~~k~iiFDlDGTL~D---~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 9 RISALTFDLDDTLYD---NRPVILRTEQEALAFV 39 (238)
T ss_pred CceeEEEcCcccccC---ChHHHHHHHHHHHHHH
Confidence 469999999999999 4443344444444333
No 288
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=86.88 E-value=0.57 Score=44.76 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=39.7
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHH-----HHhhcCCeEeecCHHHHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~ 263 (854)
|+|++|+++..++..+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 75 Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 75 DVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred eEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 99999999877777777734 47999999997543221 12222222 3445689988888877776654
No 289
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=86.49 E-value=2.4 Score=43.39 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|...++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 192 ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 192 KAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred hhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 666666666653 55444 89999999999999999764
No 290
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=86.10 E-value=1.8 Score=46.09 Aligned_cols=58 Identities=14% Similarity=0.269 Sum_probs=44.8
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
....+|+||+|.||++......-..+.+.+.|.+| ++.|..+++=|--+.+-+..-+.
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~ 177 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLK 177 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHH
Confidence 34679999999999983322334679999999999 89998888877777776666653
No 291
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=85.65 E-value=4.8 Score=48.81 Aligned_cols=52 Identities=19% Similarity=0.306 Sum_probs=42.9
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
.....|.|.-+=|-+=| |-+++.++++.+ .+.|+.|..+||-.......+-+
T Consensus 568 ~~E~~LtFvGlVGi~DP-------PR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 568 TAESDLTFVGLVGILDP-------PRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ccccceEEEEEeeccCC-------CchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHH
Confidence 34457888887665544 779999999997 99999999999999999888874
No 292
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=85.39 E-value=0.94 Score=46.22 Aligned_cols=37 Identities=8% Similarity=0.170 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++|+++++|||+..|+...+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 778889999999 9999999999999999999999987
No 293
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=84.91 E-value=7.1 Score=43.04 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=86.8
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
++..|+-=..=|++-+....|+++.+.+. .+ +.++..- + -+...+++.++|.+...++ ||. ..+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIivPL--s--Yg~~n~~Yi~~V~~~~~~l---F~~---~~~ 247 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKIIVPL--S--YGANNQAYIQQVIQAGKEL---FGA---ENF 247 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEEEEC--C--CCCchHHHHHHHHHHHHHh---cCc---cce
Confidence 34444444567888888877777665321 12 2233221 1 2222456777776655553 332 235
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCc-cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL- 482 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~-EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 482 (854)
..+...++.+|+.++++.+|+.++...| .|||..++ .+.+ |.++++|+-.-....+
T Consensus 248 ~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~---------------------G~~v~L~~~np~~~~l~ 305 (360)
T PF07429_consen 248 QILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL---------------------GKKVFLSRDNPFWQDLK 305 (360)
T ss_pred eEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc---------------------CCeEEEecCChHHHHHH
Confidence 5688899999999999999999999975 89987642 2222 4699999988877777
Q ss_pred CCceEe----CCCCHHHHHHHHHHH
Q 003042 483 SGAIRV----NPWNVDAVADAMDSA 503 (854)
Q Consensus 483 ~~ai~v----nP~d~~~~A~ai~~a 503 (854)
+.++.| +.-|...+++|=+++
T Consensus 306 ~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 306 EQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred hCCCeEEeccccCCHHHHHHHHHHH
Confidence 335443 334445555544333
No 294
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=84.62 E-value=0.97 Score=46.80 Aligned_cols=35 Identities=11% Similarity=0.131 Sum_probs=25.4
Q ss_pred CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 607 s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
.+.+.+.|+.+ ++.|+.++|+||.....+..++..
T Consensus 72 ~pg~~e~l~~l-~~~g~~~~IvS~~~~~~i~~il~~ 106 (214)
T TIGR03333 72 REGFREFVAFI-NEHGIPFYVISGGMDFFVYPLLEG 106 (214)
T ss_pred cccHHHHHHHH-HHCCCeEEEECCCcHHHHHHHHHh
Confidence 34455667777 677888999999888777777643
No 295
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=84.47 E-value=1.1 Score=45.53 Aligned_cols=34 Identities=9% Similarity=-0.017 Sum_probs=25.7
Q ss_pred CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 607 s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
.+.+.+.|+.+ ++.|..++|+||.....++.+.+
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~ 122 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLAR 122 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHH
Confidence 45566777777 67888999999888777777664
No 296
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=84.10 E-value=0.43 Score=46.82 Aligned_cols=56 Identities=18% Similarity=0.285 Sum_probs=35.3
Q ss_pred eEEEEecCCCCCCCCCCCCC----------------CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC
Q 003042 586 RLILLDYDGTVMPQTSEDKR----------------PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~~----------------is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 643 (854)
|++++||||||+........ .-|.+.+.|+.++ +...++|.|..+...+..++..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~--~~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELS--KHYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHH--HHCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHH--HhceEEEEEeehhhhhhHHHHhh
Confidence 68999999999973211100 2355666676662 44889999999888777777544
No 297
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=83.89 E-value=1.3 Score=45.03 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+....+.+++.+ |++|+++++|||+.+|+...+.+|..
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 577889999999 99999999999999999999999973
No 298
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=83.72 E-value=1.5 Score=42.69 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+..+.+.+++.+ |++++++++|||+..|+.+.+.+|..
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 568899999999 99999999999999999999999973
No 299
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=83.64 E-value=1.3 Score=43.66 Aligned_cols=72 Identities=18% Similarity=0.271 Sum_probs=54.1
Q ss_pred ccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCC------------------------------CCCCCCHHHHHHHHHc
Q 003042 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS------------------------------EDKRPSTEVLSILNDL 617 (854)
Q Consensus 568 f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~------------------------------~~~~is~~~~~aL~~L 617 (854)
....++++|..+....+.-.+-||+|.|++-.++ ..-.|+.++...|-.+
T Consensus 46 ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~M 125 (237)
T COG3700 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHH
Confidence 4457789999998888888899999999985221 1224667776666666
Q ss_pred ccCCCCeEEEEcCCCccchhhh
Q 003042 618 CNDPKNAVFIVSGRGKDSLGNW 639 (854)
Q Consensus 618 ~~~~g~~v~I~TGR~~~~l~~~ 639 (854)
.+..|-.++++|||+...++..
T Consensus 126 Hq~RGD~i~FvTGRt~gk~d~v 147 (237)
T COG3700 126 HQRRGDAIYFVTGRTPGKTDTV 147 (237)
T ss_pred HHhcCCeEEEEecCCCCccccc
Confidence 6889999999999998755443
No 300
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=83.57 E-value=7.8 Score=42.69 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=28.1
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
++. .-+..=+.+++..||.++||. |..+++. ||++++
T Consensus 213 ~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMvs-EA~~tG 249 (311)
T PF06258_consen 213 IWD-GTGENPYLGFLAAADAIVVTE--DSVSMVS-EAAATG 249 (311)
T ss_pred Eec-CCCCCcHHHHHHhCCEEEEcC--ccHHHHH-HHHHcC
Confidence 443 344556889999999999997 7788764 998873
No 301
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=83.45 E-value=2.1 Score=48.61 Aligned_cols=73 Identities=12% Similarity=0.177 Sum_probs=56.6
Q ss_pred CHHHHHHHHhhcCCeEEEEecCCCCCCCC-------------CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhh
Q 003042 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT-------------SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (854)
Q Consensus 572 ~~~~i~~~y~~~~~klI~~DlDGTLl~~~-------------~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~ 638 (854)
.+..++.+-.....|.+++|||+||.... +..+..-.+..+.+..| .++|..++|||=.....+.+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 44566666666778999999999999621 01234457788889999 89999999999999999999
Q ss_pred hhcCCcc
Q 003042 639 WFSGVEK 645 (854)
Q Consensus 639 ~~~~~~~ 645 (854)
.|..-|.
T Consensus 288 vF~khp~ 294 (574)
T COG3882 288 VFRKHPD 294 (574)
T ss_pred HHhhCCC
Confidence 9865443
No 302
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=83.18 E-value=1.6 Score=44.67 Aligned_cols=73 Identities=18% Similarity=0.227 Sum_probs=50.8
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC--CCcccc
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ--KPSMAK 817 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~--~~s~A~ 817 (854)
..+-.+| -..|.+..++.. |+. |.++++|-||.+-+.-.+.+|.. +|-+|. +...++
T Consensus 155 ~~~vcKP----~~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d 214 (244)
T KOG3109|consen 155 KTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVD 214 (244)
T ss_pred CceeecC----CHHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchH
Confidence 4444555 456778888877 998 99999999999999999999973 666664 345566
Q ss_pred eEeCCHhHHHHHHHHH
Q 003042 818 YYLDDTAEVINLLEGL 833 (854)
Q Consensus 818 y~l~~~~eV~~~L~~l 833 (854)
|.+.+.....+.+-.+
T Consensus 215 ~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 215 YALEQIHNNKEALPEL 230 (244)
T ss_pred HHHHHhhchhhhchHH
Confidence 6665444443333333
No 303
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=82.49 E-value=1.4 Score=43.76 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 142 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 142 DPDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CHHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 467888999998 9999999999999999999999986
No 304
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=82.18 E-value=2.1 Score=43.64 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=40.5
Q ss_pred cCCeEEEEecCCCCCCCCCCCC----CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDK----RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~----~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
..+|++++|||+||++..+... -.-|.+.+.|+.+. +...|+|-|..+...+...+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~--~~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAY--EDYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHH--hCCEEEEEecCCHHHHHHHHH
Confidence 4569999999999998422111 12366777887773 378899988888777777663
No 305
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=81.77 E-value=11 Score=42.56 Aligned_cols=76 Identities=12% Similarity=0.136 Sum_probs=49.3
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc---
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS--- 481 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~--- 481 (854)
+.+.+.+++. .++..||++|.. -|.| +..|+++++. |+|+.-..+-.+.
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G~---------------------P~v~~p~~~dq~~~a~ 328 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFITH---GGMN-STMEALFNGV---------------------PMVAVPQGADQPMTAR 328 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhCC---------------------CEEecCCcccHHHHHH
Confidence 3455677764 567899998854 4666 6689999843 5555444332211
Q ss_pred -C---CCceEeCC--CCHHHHHHHHHHHhcCCH
Q 003042 482 -L---SGAIRVNP--WNVDAVADAMDSALQMEN 508 (854)
Q Consensus 482 -l---~~ai~vnP--~d~~~~A~ai~~aL~m~~ 508 (854)
+ ..|+.++. .+.++++++|.++|..+.
T Consensus 329 ~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~ 361 (392)
T TIGR01426 329 RIAELGLGRHLPPEEVTAEKLREAVLAVLSDPR 361 (392)
T ss_pred HHHHCCCEEEeccccCCHHHHHHHHHHHhcCHH
Confidence 1 22555553 467899999999998653
No 306
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=80.96 E-value=23 Score=40.08 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=50.2
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC----CC----ce
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL----SG----AI 486 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----~~----ai 486 (854)
++-.+-+.|.+.|+||.+|..|-+|.|..+.+ -|-|.+..+|...-+ .+ ||
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG---------------------iPSvtTNlSGFGcfMeehi~d~~ayGI 551 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG---------------------IPSVTTNLSGFGCFMEEHIEDPQAYGI 551 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec---------------------cccccccccchhhhHHHHhcCchhceE
Confidence 56678899999999999999999999999983 355666666654333 11 44
Q ss_pred E-eC-----C-CCHHHHHHHHHHHhcCC
Q 003042 487 R-VN-----P-WNVDAVADAMDSALQME 507 (854)
Q Consensus 487 ~-vn-----P-~d~~~~A~ai~~aL~m~ 507 (854)
. |+ | .+++++++-|..-...+
T Consensus 552 YIvDRRfks~deSv~qL~~~m~~F~~qs 579 (692)
T KOG3742|consen 552 YIVDRRFKSPDESVQQLASFMYEFCKQS 579 (692)
T ss_pred EEEecccCChhhHHHHHHHHHHHHHHHH
Confidence 3 32 2 34677787777765433
No 307
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.43 E-value=1.8 Score=42.77 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=19.3
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
|.+++.+++|||+..|..+....+.
T Consensus 109 ~~~~~~vIiVDD~~~~~~~~~~NgI 133 (162)
T TIGR02251 109 GKDLSKVIIIDNSPYSYSLQPDNAI 133 (162)
T ss_pred CCChhhEEEEeCChhhhccCccCEe
Confidence 6778899999999988776665543
No 308
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=80.37 E-value=6.5 Score=42.52 Aligned_cols=92 Identities=10% Similarity=0.094 Sum_probs=56.6
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
.++|++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++++++. +.. .+ .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~~l~~~----~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLDELKKF----AKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHHHHHHH----HHh----CC-----CE
Confidence 367999999999988666777777653 22322 333443321 223333333 222 11 13
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeec
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~ 447 (854)
. +.+. .+++..+++.||++|.+ -|.+.+|+++|+.
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 3 3333 46899999999998874 4579999999944
No 309
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=80.33 E-value=1.3 Score=45.10 Aligned_cols=28 Identities=21% Similarity=0.450 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHcccCCCCeEEEEcCCCcc
Q 003042 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (854)
Q Consensus 606 is~~~~~aL~~L~~~~g~~v~I~TGR~~~ 634 (854)
|-+.+.++|++| .+.|+.++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 446678899999 6788888888888765
No 310
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=80.33 E-value=1.6 Score=46.97 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=30.7
Q ss_pred CcchHHHHH-HHHHHHhhCC--CCCCeEEEEeCCcccHHHHHHh
Q 003042 749 GVSKGIVVK-NLISTMRSRG--KSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 749 gvsKg~al~-~ll~~l~~~g--i~~d~vlaiGDs~ND~~Mf~~a 789 (854)
..+|...+. ...+++ + .++++++++|||.||+.|..-+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 357877666 467777 6 7899999999999999997665
No 311
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=80.26 E-value=9.5 Score=46.86 Aligned_cols=67 Identities=6% Similarity=0.144 Sum_probs=49.7
Q ss_pred HHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 573 MHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 573 ~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
++..++.-.++..-.+.+-+||+|+.--.....+-++...+++.| +..|+.+++.||-.........
T Consensus 691 i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~L-k~~Gi~v~mLTGDn~~aA~svA 757 (951)
T KOG0207|consen 691 ILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAEL-KSMGIKVVMLTGDNDAAARSVA 757 (951)
T ss_pred HHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHH-HhcCceEEEEcCCCHHHHHHHH
Confidence 444445555677889999999999852113445667888888888 7889999999998877776665
No 312
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=79.51 E-value=2.1 Score=44.33 Aligned_cols=38 Identities=16% Similarity=0.248 Sum_probs=27.7
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|..|-..++ +.+ |.+.+...+-|||.||.+|++.+++.
T Consensus 160 g~~Kv~rl~---~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 160 GHEKVAQLE---QKI---GSPLKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred ChHHHHHHH---HHh---CCChhheEEecCCcccHHHHHhCCCc
Confidence 444544444 334 44667788999999999999999973
No 313
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=79.15 E-value=2.2 Score=41.90 Aligned_cols=60 Identities=10% Similarity=0.110 Sum_probs=41.7
Q ss_pred hcCCeEEEEecCCCCCCCCCCCC--------------------------------CCCHHHHHHHHHcccCCCCeEEEEc
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDK--------------------------------RPSTEVLSILNDLCNDPKNAVFIVS 629 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~--------------------------------~is~~~~~aL~~L~~~~g~~v~I~T 629 (854)
+.+++.+++|||.||++...... .+-|.+.+.|+++ + +++.++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l-~-~~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEA-S-KLYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHH-H-hhcEEEEEe
Confidence 34678899999999998331100 0125667788887 3 458888888
Q ss_pred CCCccchhhhhcCC
Q 003042 630 GRGKDSLGNWFSGV 643 (854)
Q Consensus 630 GR~~~~l~~~~~~~ 643 (854)
..+...+..++..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 88888877777544
No 314
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=78.78 E-value=3.7 Score=42.81 Aligned_cols=38 Identities=13% Similarity=0.173 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+......+++++ |++++++++|||+..|+...+.+|..
T Consensus 154 ~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 154 EAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred CHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 677889999999 99999999999999999999999973
No 315
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=78.75 E-value=48 Score=37.27 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=52.7
Q ss_pred hhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc--cccC---------
Q 003042 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPSL--------- 482 (854)
Q Consensus 414 ~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l--------- 482 (854)
+++.++|++||++|.=| | ++++.|..+++. |.|+=-+... .++.
T Consensus 244 ~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~---------------------P~IliP~p~~~~~~Q~~NA~~l~~~ 298 (357)
T COG0707 244 DDMAALLAAADLVISRA---G-ALTIAELLALGV---------------------PAILVPYPPGADGHQEYNAKFLEKA 298 (357)
T ss_pred hhHHHHHHhccEEEeCC---c-ccHHHHHHHhCC---------------------CEEEeCCCCCccchHHHHHHHHHhC
Confidence 56999999999988533 3 467889999854 4444444443 1222
Q ss_pred CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q 003042 483 SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEKHYKYI 522 (854)
Q Consensus 483 ~~ai~vnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 522 (854)
..|+.+.-++ .+.+++.|.+++..+ ++...+....+.+
T Consensus 299 gaa~~i~~~~lt~~~l~~~i~~l~~~~--~~l~~m~~~a~~~ 338 (357)
T COG0707 299 GAALVIRQSELTPEKLAELILRLLSNP--EKLKAMAENAKKL 338 (357)
T ss_pred CCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHhc
Confidence 2367776666 789999999998763 3333343333333
No 316
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=76.66 E-value=28 Score=38.04 Aligned_cols=125 Identities=18% Similarity=0.168 Sum_probs=79.9
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE-ecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI-TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi-~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
++..|+-=..=|+.-.....|.++.+.+.. ++.++.. +.|+ ++ +++.++|.+...+ .||. ..
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn----~~Yi~~V~~~~~~---lF~~---~~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN----QAYIEEVRQAGLA---LFGA---EN 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC----HHHHHHHHHHHHH---hcCc---cc
Confidence 344444445678888888888888766422 2333322 3332 22 4566676665554 4542 24
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
+..++..++.+|+.++++.+|+.++.-- ..|+|..++=. .. |.++++|+-.-....+
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~---------------------G~~v~l~r~n~fwqdl 265 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL---------------------GKPVVLSRDNPFWQDL 265 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC---------------------CCcEEEecCCchHHHH
Confidence 6678999999999999999999998875 48998764321 11 3588888777666666
Q ss_pred -CCceEe
Q 003042 483 -SGAIRV 488 (854)
Q Consensus 483 -~~ai~v 488 (854)
+-++-|
T Consensus 266 ~e~gv~V 272 (322)
T PRK02797 266 TEQGLPV 272 (322)
T ss_pred HhCCCeE
Confidence 335444
No 317
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=75.97 E-value=1.6 Score=48.58 Aligned_cols=67 Identities=18% Similarity=0.289 Sum_probs=39.0
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCC-----------CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceee
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKR-----------PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~-----------is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~lia 650 (854)
+...+++++|+|||++. ++.. -+..+.+..... ..+|+.|.-.|.|+...+..-. .-+..++
T Consensus 372 r~n~kiVVsDiDGTITk---SD~~Ghv~~miGkdwth~gVAkLYtdI-~rNGYkI~YltsR~~Gqa~sTr---sylrnie 444 (580)
T COG5083 372 RNNKKIVVSDIDGTITK---SDALGHVKQMIGKDWTHNGVAKLYTDI-DRNGYKIKYLTSRSYGQADSTR---SYLRNIE 444 (580)
T ss_pred eCCCcEEEEecCCcEEe---hhhHHHHHHHhccchhhcchhhhhhhh-ccCceEEEEEecccccchhhhh---hHHHhhh
Confidence 35679999999999998 3211 122333444444 4567777777777766544332 1233444
Q ss_pred cCcEE
Q 003042 651 EHGYF 655 (854)
Q Consensus 651 enG~~ 655 (854)
+||+.
T Consensus 445 Qngyk 449 (580)
T COG5083 445 QNGYK 449 (580)
T ss_pred hcCcc
Confidence 55543
No 318
>COG4996 Predicted phosphatase [General function prediction only]
Probab=74.63 E-value=4.1 Score=38.23 Aligned_cols=14 Identities=36% Similarity=0.506 Sum_probs=12.4
Q ss_pred eEEEEecCCCCCCC
Q 003042 586 RLILLDYDGTVMPQ 599 (854)
Q Consensus 586 klI~~DlDGTLl~~ 599 (854)
++|+||.||||.++
T Consensus 1 ~~i~~d~d~t~wdh 14 (164)
T COG4996 1 RAIVFDADKTLWDH 14 (164)
T ss_pred CcEEEeCCCccccc
Confidence 57999999999984
No 319
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=74.57 E-value=2.4 Score=43.01 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=12.9
Q ss_pred CeEEEEecCCCCCC
Q 003042 585 SRLILLDYDGTVMP 598 (854)
Q Consensus 585 ~klI~~DlDGTLl~ 598 (854)
+|+|+||+||||++
T Consensus 1 ik~viFD~dgTLiD 14 (198)
T TIGR01428 1 IKALVFDVYGTLFD 14 (198)
T ss_pred CcEEEEeCCCcCcc
Confidence 47899999999999
No 320
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.75 E-value=1.3 Score=43.84 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFES 788 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ 788 (854)
+......+++.+ |++++++++|||+..|+...+.
T Consensus 141 ~p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 DPVVYELVFDTV---GLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CHHHHHHHHHHH---CCCHHHeEeEecChhhHHHHhc
Confidence 566778889998 9999999999999999987764
No 321
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=70.34 E-value=64 Score=35.08 Aligned_cols=67 Identities=16% Similarity=0.120 Sum_probs=43.8
Q ss_pred CChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC--------
Q 003042 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-------- 482 (854)
Q Consensus 411 ~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-------- 482 (854)
.+..++..+++.||++|-.+ |+|. ..|+++++. |.++=-..|..|+.
T Consensus 239 ~~~~~~~~~m~~ad~vIs~~---G~~t-~~Ea~~~g~---------------------P~l~ip~~~~~EQ~~~a~~l~~ 293 (318)
T PF13528_consen 239 FSTPDFAELMAAADLVISKG---GYTT-ISEALALGK---------------------PALVIPRPGQDEQEYNARKLEE 293 (318)
T ss_pred cChHHHHHHHHhCCEEEECC---CHHH-HHHHHHcCC---------------------CEEEEeCCCCchHHHHHHHHHH
Confidence 34578999999999988664 7763 469999844 55554444555554
Q ss_pred CC-ceEeCCC--CHHHHHHHHHH
Q 003042 483 SG-AIRVNPW--NVDAVADAMDS 502 (854)
Q Consensus 483 ~~-ai~vnP~--d~~~~A~ai~~ 502 (854)
.| ++.++++ +.+.++++|++
T Consensus 294 ~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 294 LGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred CCCeEEcccccCCHHHHHHHHhc
Confidence 12 4555544 45788877765
No 322
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=70.31 E-value=21 Score=34.46 Aligned_cols=72 Identities=24% Similarity=0.281 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC
Q 003042 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (854)
Q Consensus 344 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A 423 (854)
-+.+...+++++ ++..|.||.|-..++..+. ..+.+++.+.++..+|+. ||++....++-.+-...+..+
T Consensus 41 ~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~l----pv~l~DERltTv~A~~~L~~~ 110 (141)
T COG0816 41 DFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFNL----PVVLWDERLSTVEAERMLIEA 110 (141)
T ss_pred hHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcCC----CEEEEcCccCHHHHHHHHHHc
Confidence 445556666665 3568889999877777665 677899999999999974 799999888887777766665
Q ss_pred cE
Q 003042 424 EC 425 (854)
Q Consensus 424 Dv 425 (854)
++
T Consensus 111 ~~ 112 (141)
T COG0816 111 GV 112 (141)
T ss_pred CC
Confidence 43
No 323
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=70.30 E-value=3.5 Score=42.61 Aligned_cols=15 Identities=40% Similarity=0.758 Sum_probs=13.9
Q ss_pred CCeEEEEecCCCCCC
Q 003042 584 NSRLILLDYDGTVMP 598 (854)
Q Consensus 584 ~~klI~~DlDGTLl~ 598 (854)
..|+.+||+||||++
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 579999999999998
No 324
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=69.60 E-value=12 Score=45.61 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=28.5
Q ss_pred HHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceee
Q 003042 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650 (854)
Q Consensus 608 ~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~lia 650 (854)
..+=++..+ |+..|++|+.+||+.+...+.+. ...|++.
T Consensus 593 ~~vP~Av~~-CrsAGIkvimVTgdhpiTAkAiA---~~vgIi~ 631 (1019)
T KOG0203|consen 593 AAVPDAVGK-CRSAGIKVIMVTGDHPITAKAIA---KSVGIIS 631 (1019)
T ss_pred ccCchhhhh-hhhhCceEEEEecCccchhhhhh---hheeeec
Confidence 333345555 58889999999999999998887 3455543
No 325
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=69.05 E-value=4.7 Score=47.42 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=49.9
Q ss_pred cCCeEEEEecCCCCCCCCC-------CCCCC-CHHHHHHHHHcccCCCCeEEEEcCCCccc---hhhhhcCCcccceeec
Q 003042 583 TNSRLILLDYDGTVMPQTS-------EDKRP-STEVLSILNDLCNDPKNAVFIVSGRGKDS---LGNWFSGVEKLGLSAE 651 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~-------~~~~i-s~~~~~aL~~L~~~~g~~v~I~TGR~~~~---l~~~~~~~~~l~liae 651 (854)
-.-|+|+.|+|||++.... ..+.- ..-+.+...+. .++|++++.+|.|.... .+.++..+.+-|-+--
T Consensus 528 Wn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~I-k~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LP 606 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKI-KENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLP 606 (738)
T ss_pred cCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHH-HhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCC
Confidence 3569999999999997220 11222 24455566666 78999999999999764 3445555555555555
Q ss_pred CcEEEEEC
Q 003042 652 HGYFTRWS 659 (854)
Q Consensus 652 nG~~I~~~ 659 (854)
+|-.|..+
T Consensus 607 dGPViLSP 614 (738)
T KOG2116|consen 607 DGPVILSP 614 (738)
T ss_pred CCCEEeCC
Confidence 66665554
No 326
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=69.01 E-value=3.9 Score=40.45 Aligned_cols=24 Identities=21% Similarity=0.303 Sum_probs=17.0
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHc
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L 617 (854)
+|+||+||||++ .. +...++++.+
T Consensus 1 ~viFD~DGTL~D---~~----~~~~~~~~~~ 24 (175)
T TIGR01493 1 AMVFDVYGTLVD---VH----GGVRACLAAI 24 (175)
T ss_pred CeEEecCCcCcc---cH----HHHHHHHHHh
Confidence 479999999999 33 3455555555
No 327
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=65.34 E-value=1.2e+02 Score=37.22 Aligned_cols=134 Identities=10% Similarity=0.096 Sum_probs=74.8
Q ss_pred CCEEEEEecCccccCCHHHH-HHHHHHH--HHhCCCCCC-cEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 325 GKIVILGVDDMDLFKGISLK-FLAMGQL--LEQHPDLRG-KVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~-l~A~~~l--l~~~p~~~~-~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
+.-+++.+-|+..-|-..+. |.-+.++ +++.|+... .+++|..|-..-++. .-.++-+.+.++++.||..-...+
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~-~gK~iIk~I~~va~~in~Dp~v~~ 521 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY-MGKEIIKLINNVAEVINNDPEVGD 521 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H-HHHHHHHHHHHHHHHHCT-TTTCC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHHhcChhhcc
Confidence 45678899999999987763 3333333 345665432 466665554332222 224566677777888876443334
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcEEEEccCc--cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVR--DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC 478 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~--EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 478 (854)
.-.|+|+.. .+-.--..++.+|||-..+|++ |.=|..-+-||. .|.+.+|..-|+
T Consensus 522 ~lkVvFlen-YdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~----------------------NGaL~lstlDG~ 578 (713)
T PF00343_consen 522 RLKVVFLEN-YDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAM----------------------NGALNLSTLDGW 578 (713)
T ss_dssp GEEEEEETT--SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHH----------------------TT-EEEEESSTC
T ss_pred ceeEEeecC-CcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhc----------------------CCCeEEecccch
Confidence 445777774 5556666889999999999974 333333333333 378899988888
Q ss_pred cccC
Q 003042 479 SPSL 482 (854)
Q Consensus 479 ~~~l 482 (854)
.-++
T Consensus 579 niEi 582 (713)
T PF00343_consen 579 NIEI 582 (713)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 6655
No 328
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=64.50 E-value=3.3 Score=42.56 Aligned_cols=13 Identities=31% Similarity=0.767 Sum_probs=12.2
Q ss_pred eEEEEecCCCCCC
Q 003042 586 RLILLDYDGTVMP 598 (854)
Q Consensus 586 klI~~DlDGTLl~ 598 (854)
++++||+||||++
T Consensus 2 ~la~FDlD~TLi~ 14 (203)
T TIGR02137 2 EIACLDLEGVLVP 14 (203)
T ss_pred eEEEEeCCcccHH
Confidence 6899999999998
No 329
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=64.39 E-value=8.7 Score=40.04 Aligned_cols=38 Identities=11% Similarity=0.087 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHhhCCCCC-CeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSP-DFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~-d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
........++.+ |.++ +.+++|.|+.+=+.+..++|..
T Consensus 153 ~Pdi~l~A~~~l---~~~~~~k~lVfeds~~Gv~aa~aagm~ 191 (222)
T KOG2914|consen 153 DPDIYLKAAKRL---GVPPPSKCLVFEDSPVGVQAAKAAGMQ 191 (222)
T ss_pred CchHHHHHHHhc---CCCCccceEEECCCHHHHHHHHhcCCe
Confidence 444555666667 7777 9999999999999999999983
No 330
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=64.35 E-value=9.6 Score=40.09 Aligned_cols=14 Identities=36% Similarity=0.790 Sum_probs=12.6
Q ss_pred EEEEecCCCCCCCC
Q 003042 587 LILLDYDGTVMPQT 600 (854)
Q Consensus 587 lI~~DlDGTLl~~~ 600 (854)
|++||+|+||++..
T Consensus 2 LvvfDFD~TIvd~d 15 (234)
T PF06888_consen 2 LVVFDFDHTIVDQD 15 (234)
T ss_pred EEEEeCCCCccCCc
Confidence 79999999999855
No 331
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=60.50 E-value=61 Score=34.48 Aligned_cols=52 Identities=25% Similarity=0.367 Sum_probs=36.6
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~ 260 (854)
|+|.--...-.++..+|++++...++.-.+| |. +|.+ ..|+|-.--+|+.+.
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~---Pr------lp~~--------~fDlvivp~HD~~~~ 123 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD---PR------LPYN--------HFDLVIVPYHDWREE 123 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC---CC------CCcc--------cceEEeccchhhhhh
Confidence 7888888899999999999998877776666 32 2322 267776655566543
No 332
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=59.28 E-value=7.8 Score=43.06 Aligned_cols=49 Identities=33% Similarity=0.483 Sum_probs=36.0
Q ss_pred cCCeEEEEecCCCCCCCCC--------CC-CCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 583 TNSRLILLDYDGTVMPQTS--------ED-KRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~--------~~-~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
-..|++.|||||||++..+ .+ .-+.++.-.-|..+ .++|+.++|.|-..
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl-~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTL-YQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhh-ccCCeEEEEEeccc
Confidence 3569999999999998432 11 12346667788888 88999999988543
No 333
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=58.27 E-value=88 Score=36.95 Aligned_cols=100 Identities=19% Similarity=0.196 Sum_probs=69.2
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEE
Q 003042 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (854)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~ 406 (854)
.|+++.. -+.|=.++.+.-.-++|+.-|+-. |++.+.+ +..+..+.++.++++ .| .+..-.+
T Consensus 431 vVf~c~~--n~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~----~G-v~~eRL~- 492 (620)
T COG3914 431 VVFCCFN--NYFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAER----EG-VDSERLR- 492 (620)
T ss_pred EEEEecC--CcccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHH----cC-CChhhee-
Confidence 3444555 467778888888889999999743 5555542 224556666666655 22 2333344
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
|....+.++-.|.|..||+++-|=-+-| ..++.|++.+
T Consensus 493 f~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm 530 (620)
T COG3914 493 FLPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM 530 (620)
T ss_pred ecCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh
Confidence 5557888999999999999998877655 4678899987
No 334
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.94 E-value=22 Score=39.59 Aligned_cols=116 Identities=7% Similarity=0.033 Sum_probs=76.7
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCc---cCC---CCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVR---DGM---NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~---EG~---~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (854)
+.++..-.+.......|+.-|+.+.=+.. ++. +.-..|+++| +|+++.+--.+
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc---------------------~~~liT~~~~~ 297 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC---------------------GGFLITDYWKD 297 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc---------------------CCccccccHHH
Confidence 34444444457888888888887754432 333 7888999999 46666665555
Q ss_pred ccccC-CC-ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 478 CSPSL-SG-AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 478 ~~~~l-~~-ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
.-.-+ .| .+++ -.|..++.+.+...+.-+++.++.......+.+..|+...-+..++..+...
T Consensus 298 ~e~~f~pgk~~iv-~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 298 LEKFFKPGKDIIV-YQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHhcCCchheEE-ecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 44334 23 3444 5688999999999998776444443344444455688888888888777753
No 335
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=57.30 E-value=35 Score=41.92 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 605 ~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
..-|.+.++++. |+..|++|-.+||-.....+.+..
T Consensus 647 PvRPgV~~AV~~-Cq~AGItVRMVTGDNI~TAkAIA~ 682 (1034)
T KOG0204|consen 647 PVRPGVPEAVQL-CQRAGITVRMVTGDNINTAKAIAR 682 (1034)
T ss_pred CCCCCcHHHHHH-HHHcCcEEEEEeCCcHHHHHHHHH
Confidence 456888999988 599999999999999999988874
No 336
>PRK14986 glycogen phosphorylase; Provisional
Probab=56.61 E-value=1.4e+02 Score=37.04 Aligned_cols=136 Identities=13% Similarity=0.092 Sum_probs=86.9
Q ss_pred CCEEEEEecCccccCCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~-~l~A~~~ll--~~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
+.-.++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-+.-++. .-.++-+.+.+++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhccChhhcC
Confidence 4457788999999998887 777777663 4566522 2467776665543332 224667778888888886543344
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccc
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (854)
.-.|+|+.. ..-.--..++.+|||-.-+|+ .++|| |+.++ |-.+. .|+|-+|..-|...
T Consensus 621 ~lkVVFlen-Y~vslAe~lipg~Dv~eqis~------ag~EA--SGTsn--MK~al----------NGaLtlgtlDG~nv 679 (815)
T PRK14986 621 KLKVVFIPN-YSVSLAQLIIPAADLSEQISL------AGTEA--SGTSN--MKFAL----------NGALTIGTLDGANV 679 (815)
T ss_pred ceeEEEeCC-CCHHHHHHhhhhhhhhhhCCC------CCccc--cCcch--hhHHh----------cCceeeeccCCchh
Confidence 456888875 444455578999999887776 45553 22211 11111 37888888888766
Q ss_pred cC
Q 003042 481 SL 482 (854)
Q Consensus 481 ~l 482 (854)
++
T Consensus 680 Ei 681 (815)
T PRK14986 680 EM 681 (815)
T ss_pred HH
Confidence 65
No 337
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=55.56 E-value=8.7 Score=41.55 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=32.8
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCC----CCeEEEEcCC
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDP----KNAVFIVSGR 631 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~----g~~v~I~TGR 631 (854)
.--|+||+||.|+- .+.+-+...++|+.| .++ .+++++.|.-
T Consensus 35 ~fgfafDIDGVL~R----G~~~i~~~~~Alr~L-~~~~g~lkIP~vfLTNG 80 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFR----GHRPIPGALKALRRL-VDNQGQLKIPFVFLTNG 80 (389)
T ss_pred ceeEEEecccEEEe----cCCCCcchHHHHHHH-HhcCCCeeccEEEEeCC
Confidence 45799999999998 556678889999999 555 6677777643
No 338
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=54.94 E-value=4.2 Score=41.41 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 754 IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 754 ~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
..+..+++.+ +.++..|+++||+.||..|++.||
T Consensus 182 k~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 182 KIFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hhHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 3668888888 888999999999999999999885
No 339
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=54.80 E-value=10 Score=39.57 Aligned_cols=58 Identities=21% Similarity=0.399 Sum_probs=41.3
Q ss_pred hcCCeEEEEecCCCCCCCCC-------C----------------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccc-hh
Q 003042 582 KTNSRLILLDYDGTVMPQTS-------E----------------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS-LG 637 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~-------~----------------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~-l~ 637 (854)
+.+.+.|++|+|-|+++-.+ + ...+-+-..+.|+-. ..+|..|+.+|.|..+. ..
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yv-n~~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYV-NSNGGKIFYISNRDQENEKD 154 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHH-HhcCcEEEEEeccchhcccc
Confidence 44567999999999998321 0 112345667778877 78899999999998876 44
Q ss_pred hhh
Q 003042 638 NWF 640 (854)
Q Consensus 638 ~~~ 640 (854)
.-+
T Consensus 155 ~T~ 157 (274)
T COG2503 155 GTI 157 (274)
T ss_pred hhH
Confidence 444
No 340
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=53.22 E-value=92 Score=31.13 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHHHHHHhc----CCCCCeEEEeCcccchHHHHHHhccCCCeEEEEe
Q 003042 168 EWQAYLSANKVFADKVMEVI----NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFL 221 (854)
Q Consensus 168 ~w~~Y~~vN~~fa~~i~~~~----~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~fl 221 (854)
.|+.=..-=+..|+.+.+.- .| |+|.-| +-+.=+-+||+.+|++++.-++
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~P--DvI~~H--~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVP--DVIIAH--PGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCC--CEEEEc--CCcchhhhHHHhCCCCcEEEEE
Confidence 34444444455555554433 35 999999 9999999999999999987543
No 341
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=51.44 E-value=14 Score=38.75 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~ 792 (854)
-...-+..++++ |+.|++|+.|||+ .||+.-.+.+|..
T Consensus 170 Dp~If~~al~~l---~v~Pee~vhIgD~l~nD~~gA~~~G~~ 208 (237)
T KOG3085|consen 170 DPRIFQLALERL---GVKPEECVHIGDLLENDYEGARNLGWH 208 (237)
T ss_pred ChHHHHHHHHHh---CCChHHeEEecCccccccHhHHHcCCE
Confidence 345677788888 9999999999998 6999999999983
No 342
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=49.10 E-value=7.4 Score=38.47 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=10.9
Q ss_pred EEEEecCCCCCC
Q 003042 587 LILLDYDGTVMP 598 (854)
Q Consensus 587 lI~~DlDGTLl~ 598 (854)
.++||+||||++
T Consensus 1 ~vlFDlDgtLv~ 12 (183)
T TIGR01509 1 AILFDLDGVLVD 12 (183)
T ss_pred CeeeccCCceec
Confidence 379999999999
No 343
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=48.87 E-value=9.3 Score=38.15 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=28.2
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFE 787 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~ 787 (854)
+|..+++.+...... +.+.+.++++|||.||++|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999221111 457889999999999999986
No 344
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=48.86 E-value=9.3 Score=38.84 Aligned_cols=13 Identities=15% Similarity=0.401 Sum_probs=12.0
Q ss_pred eEEEEecCCCCCC
Q 003042 586 RLILLDYDGTVMP 598 (854)
Q Consensus 586 klI~~DlDGTLl~ 598 (854)
++|+||+||||++
T Consensus 1 ~~viFDldgvL~d 13 (199)
T PRK09456 1 MLYIFDLGNVIVD 13 (199)
T ss_pred CEEEEeCCCcccc
Confidence 4799999999999
No 345
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=48.53 E-value=7.5 Score=37.70 Aligned_cols=35 Identities=14% Similarity=0.313 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhhCCCC--CCeEEEEeC---CcccHHHHHHhhh
Q 003042 754 IVVKNLISTMRSRGKS--PDFVLCIGD---DRSDEDMFESIEQ 791 (854)
Q Consensus 754 ~al~~ll~~l~~~gi~--~d~vlaiGD---s~ND~~Mf~~ag~ 791 (854)
..+..+++++ |+. ++.+++.+| ...|.++++.+-.
T Consensus 105 ~~~~~~l~~~---~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~ 144 (176)
T PF13419_consen 105 ERIERVLERL---GLDDYFDEIISSDDVGSRKPDPDAYRRALE 144 (176)
T ss_dssp HHHHHHHHHT---THGGGCSEEEEGGGSSSSTTSHHHHHHHHH
T ss_pred cccccccccc---ccccccccccccchhhhhhhHHHHHHHHHH
Confidence 4667778877 776 676665544 3457788887644
No 346
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=47.02 E-value=13 Score=40.06 Aligned_cols=60 Identities=20% Similarity=0.335 Sum_probs=44.5
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+.-.|+||-||.|.. ...+-+.+.++|+.| +..|-.++++|..+..+.+.++..+..+|+
T Consensus 21 ~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L-~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWL----GEKPIPGSPEALNLL-KSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred hcCEEEEcCCcceee----cCCCCCChHHHHHHH-HHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 457899999999998 333445666666666 566889999999998888887765544554
No 347
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=45.45 E-value=2.4e+02 Score=29.21 Aligned_cols=46 Identities=33% Similarity=0.384 Sum_probs=27.5
Q ss_pred ceEEEecCccccccCC--C---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003042 468 SVIIVSEFIGCSPSLS--G---AIRVNPWNVDAVADAMDSALQMENQEKILRHEK 517 (854)
Q Consensus 468 g~lV~Se~~G~~~~l~--~---ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 517 (854)
+|++.-|-+|+.--+. | .+-|+|.+-.++|.||+-. | +|.+.|.++
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlS--M--EEer~rQe~ 236 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLS--M--EEERARQER 236 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhh--H--HHHHHHHHH
Confidence 3555555444443332 1 4678999889999998743 3 344455543
No 348
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=45.33 E-value=53 Score=29.72 Aligned_cols=36 Identities=11% Similarity=0.254 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDL 381 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l 381 (854)
..|...++++++.+|+.+ +|.||..+..+..-|.++
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~i 84 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAEI 84 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHHH
Confidence 578889999999999887 888887666565444443
No 349
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=45.01 E-value=22 Score=33.90 Aligned_cols=53 Identities=15% Similarity=0.342 Sum_probs=36.3
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCc--cchhhhh
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK--DSLGNWF 640 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~--~~l~~~~ 640 (854)
..-+-++||||.++.-.+...--..++++.|.+. |..|+|+|--.. ..++++.
T Consensus 42 ttgiAildL~G~~l~l~S~R~~~~~evi~~I~~~----G~PviVAtDV~p~P~~V~Kia 96 (138)
T PF04312_consen 42 TTGIAILDLDGELLDLKSSRNMSRSEVIEWISEY----GKPVIVATDVSPPPETVKKIA 96 (138)
T ss_pred eeEEEEEecCCcEEEEEeecCCCHHHHHHHHHHc----CCEEEEEecCCCCcHHHHHHH
Confidence 3467899999999974433333346666666665 999999997653 4555554
No 350
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=44.52 E-value=21 Score=35.29 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~ 791 (854)
=+.++++.++.+ ++++++|++|||. .+|+---..+|.
T Consensus 95 ~~~~fr~Al~~m---~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 95 FGRAFRRALKEM---NLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcchhhhhhhcccccCc
Confidence 567899999999 9999999999998 588766666654
No 351
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=44.42 E-value=29 Score=32.53 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=29.1
Q ss_pred HHHHHhcCCCCCeEEEeCccc-chHHHHHHhccCCCeEEEEec
Q 003042 181 DKVMEVINPDEDYVWIHDYHL-MVLPSFLRKRFHRVKVGFFLH 222 (854)
Q Consensus 181 ~~i~~~~~~~~D~vwihDyhl-~llp~~lr~~~~~~~i~~flH 222 (854)
.++++..+| |+|++|...- .+++.++++.....|+.+..|
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 455666677 9999999875 455666655544489999999
No 352
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=43.81 E-value=3.9e+02 Score=27.70 Aligned_cols=155 Identities=19% Similarity=0.330 Sum_probs=88.9
Q ss_pred CCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHH
Q 003042 224 PFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQF 303 (854)
Q Consensus 224 pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~ 303 (854)
-||.+++||.+ .+..|++-|-.-|-|-|.|+.-+-|=|.. .|+--+- --.+.++| |++.+.+
T Consensus 32 efpDydvfrAf-TS~kIIkkLK~rdgi~~dTP~~aL~klk~------------~gy~evi----iQ~lhiIp-G~EyEkl 93 (265)
T COG4822 32 EFPDYDVFRAF-TSRKIIKKLKERDGIDFDTPIQALNKLKD------------QGYEEVI----IQPLHIIP-GIEYEKL 93 (265)
T ss_pred hCccHHHHHHH-hHHHHHHHHHhhcCcccCCHHHHHHHHHH------------ccchhee----eeeeeecC-chHHHHH
Confidence 38899999976 45668888888999999999877664431 1211010 11344555 8877665
Q ss_pred HhhhCCchHHHHHHHHHHHcC----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC-ChhHH
Q 003042 304 ESIMSLDVTGQKVKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS-SGKDV 378 (854)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~~~----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~-~~~~~ 378 (854)
. ..++.++..|. |++++-+- -.... +++.+..+.|.++.+=.+|..|-.+.. .-..|
T Consensus 94 v---------r~V~~~~~dF~~lkig~PlLy~k------~DYe~---~v~aik~~~ppl~k~e~~vlmgHGt~h~s~~~Y 155 (265)
T COG4822 94 V---------REVNKYSNDFKRLKIGRPLLYYK------NDYEI---CVEAIKDQIPPLNKDEILVLMGHGTDHHSNAAY 155 (265)
T ss_pred H---------HHHHHHhhhhheeecCCceeech------hhHHH---HHHHHHHhcCCcCcCeEEEEEecCCCccHHHHH
Confidence 4 23445555552 45554444 23333 444556678988777667777744321 11223
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEE--EcCCCChhhHHHHHHhCcE
Q 003042 379 QDLLSDTNRIAEEINLNFGKPGYEPIVI--IKEPLSTQDKVPYYAIAEC 425 (854)
Q Consensus 379 ~~l~~~v~~~v~~In~~~~~~~~~pv~~--~~~~~~~~el~aly~~ADv 425 (854)
.-+..-+.+ .++.||.. ..+.-..+.+..+++..-+
T Consensus 156 acLd~~~~~-----------~~f~~v~v~~ve~yP~~d~vi~~l~~~~~ 193 (265)
T COG4822 156 ACLDHVLDE-----------YGFDNVFVAAVEGYPLVDTVIEYLRKNGI 193 (265)
T ss_pred HHHHHHHHh-----------cCCCceEEEEecCCCcHHHHHHHHHHcCC
Confidence 333332222 34555543 4555566788888887654
No 353
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=43.27 E-value=14 Score=34.95 Aligned_cols=48 Identities=23% Similarity=0.185 Sum_probs=40.5
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
.+-++++|+.. .+.+-+++.+.|+.| .+- +.|+|+||-.+.++.....
T Consensus 17 ~~~~v~~tiat----gGklf~ev~e~iqeL-~d~-V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT----GGKLFSEVSETIQEL-HDM-VDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc----CcEEcHhhHHHHHHH-HHh-heEEEecCCcchHHHHHHH
Confidence 45678899987 667788999999999 666 9999999999999988873
No 354
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=42.54 E-value=3.6e+02 Score=33.66 Aligned_cols=136 Identities=10% Similarity=0.072 Sum_probs=85.9
Q ss_pred CCEEEEEecCccccCCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~-~l~A~~~ll--~~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
+...++.+-|+..-|-..+ .|.-++++. ..+|+.. ..+++|..|-..-++.. -.++-+.+..++..||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYM-AKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHhccChhcCC
Confidence 5567889999999998887 776666553 3456522 24667766654433322 24667788888888887644455
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccc
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (854)
+-.|+|+.. ..-.--..++.+|||-.-.|+ .++|| |+.++ |-.++ .|.|.+|..-|+..
T Consensus 608 ~lkVVFlen-Y~VslAe~iipaaDvseqis~------ag~EA--SGTsn--MK~~l----------NGaltlgtlDGanv 666 (797)
T cd04300 608 KLKVVFLPN-YNVSLAEKIIPAADLSEQIST------AGKEA--SGTGN--MKFML----------NGALTIGTLDGANV 666 (797)
T ss_pred ceEEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccc--cCCch--hhHHh----------cCceeeecccchhH
Confidence 556888875 344444568999999777665 55563 22211 11111 36788888777765
Q ss_pred cC
Q 003042 481 SL 482 (854)
Q Consensus 481 ~l 482 (854)
++
T Consensus 667 Ei 668 (797)
T cd04300 667 EI 668 (797)
T ss_pred HH
Confidence 55
No 355
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=41.53 E-value=1.1e+02 Score=28.98 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHh
Q 003042 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (854)
Q Consensus 343 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ 422 (854)
..+..+..+.+++. +..+.||.|-..+|.. .+....+.+.++++..+|+. ||.++....+-.+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFGV----PVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHH
Confidence 44577777777764 3367899888766654 45667788888888888853 79999988888877777765
No 356
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=40.69 E-value=2e+02 Score=27.52 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=49.3
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A 423 (854)
+..+..+.++++ +..+.||.|...+|.. .+....+.+.++++..+++. ||+++....+-.+-...|..+
T Consensus 43 ~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 43 WDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFGL----PVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHHc
Confidence 566666766663 4478899987655543 45567778888888777743 799999888888777777654
No 357
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=39.83 E-value=60 Score=32.36 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=31.3
Q ss_pred CcchHHHHHHHHHHHhhC--CCCCCeEEEEeCC-cccHHHHHHhhh
Q 003042 749 GVSKGIVVKNLISTMRSR--GKSPDFVLCIGDD-RSDEDMFESIEQ 791 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~--gi~~d~vlaiGDs-~ND~~Mf~~ag~ 791 (854)
..-|..+.+.+++++... ...++++++|||- .+|+-|....|.
T Consensus 113 ~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~ 158 (168)
T PF09419_consen 113 RAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGS 158 (168)
T ss_pred CCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCc
Confidence 344666667777777221 1359999999997 699999988875
No 358
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=38.98 E-value=2.6e+02 Score=31.18 Aligned_cols=235 Identities=16% Similarity=0.156 Sum_probs=97.3
Q ss_pred EEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCC----ChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhh
Q 003042 194 VWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP----VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRML 269 (854)
Q Consensus 194 vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp----~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l 269 (854)
+||.|.++..+-.+. ..++.++.+.||-- |--.+....+ .+....+....+|.+-..+....+.|.++ .
T Consensus 81 ~~i~~~~~~~~~~~~--~~~~~~~i~lwHG~-~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~~----f 153 (369)
T PF04464_consen 81 YIISDSYFPDLIYFK--KRKNQKYIQLWHGI-PLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKEIFKKA----F 153 (369)
T ss_dssp EEEESS---T--TS-----TTSEEEE--SS---SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHHHHHHH----T
T ss_pred EEEECCCCCcccccc--cCCCcEEEEecCCC-cccccchhccccccchhhhhhhccCCcEEEECCHHHHHHHHHH----h
Confidence 777775444322221 13578999999966 5444332222 22366677778898877666544444332 2
Q ss_pred CccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH-----
Q 003042 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI----- 341 (854)
Q Consensus 270 g~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi----- 341 (854)
+... . +++..|.- ++.......... .+.+++.+ .++++||+.=.+-....-
T Consensus 154 ~~~~-------------~----~i~~~G~P--R~D~l~~~~~~~--~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~ 212 (369)
T PF04464_consen 154 GYPE-------------D----KILVTGYP--RNDYLFNKSKEN--RNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKF 212 (369)
T ss_dssp T--G-------------G----GEEES--G--GGHHHHHSTT-H--HHHHHHHTT--SS-EEEEEE----GGG--GGSS-
T ss_pred ccCc-------------c----eEEEeCCC--eEhHHhccCHHH--HHHHHHHhccCCCCcEEEEeeccccccccccccc
Confidence 2111 0 12334442 333322222111 45556555 578899998543322221
Q ss_pred HHHHHHHHHHH-HhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 342 SLKFLAMGQLL-EQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 342 ~~~l~A~~~ll-~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
.....-+++|. ...++ .+|+.-. .|.. ....... . .....++.+.. ..++..++
T Consensus 213 ~~~~~~~~~l~~~~~~~----~~li~k~------Hp~~---~~~~~~~-------~--~~~~~i~~~~~---~~~~~~ll 267 (369)
T PF04464_consen 213 FFSDLDFEKLNFLLKNN----YVLIIKP------HPNM---KKKFKDF-------K--EDNSNIIFVSD---NEDIYDLL 267 (369)
T ss_dssp ---TT-HHHHHHHHTTT----EEEEE--------SHHH---HTT-----------T--T-TTTEEE-TT----S-HHHHH
T ss_pred cccccCHHHHHHHhCCC----cEEEEEe------Cchh---hhchhhh-------h--ccCCcEEECCC---CCCHHHHH
Confidence 11111233331 22333 3344322 1211 1111110 0 11123555554 34899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe--cC------ccccccCC---CceEeC
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS--EF------IGCSPSLS---GAIRVN 489 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S--e~------~G~~~~l~---~ai~vn 489 (854)
..||++|- =+.=+..||+.+++ |+|.- +. .|...... .|-.+
T Consensus 268 ~~aDiLIT-----DySSi~fD~~~l~K---------------------Piify~~D~~~Y~~~rg~~~~~~~~~pg~~~- 320 (369)
T PF04464_consen 268 AAADILIT-----DYSSIIFDFLLLNK---------------------PIIFYQPDLEEYEKERGFYFDYEEDLPGPIV- 320 (369)
T ss_dssp HT-SEEEE-----SS-THHHHHGGGT-----------------------EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE-
T ss_pred HhcCEEEE-----echhHHHHHHHhCC---------------------CEEEEeccHHHHhhccCCCCchHhhCCCcee-
Confidence 99999772 12338899999832 55532 11 23322221 13333
Q ss_pred CCCHHHHHHHHHHHhcCCHH
Q 003042 490 PWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~ 509 (854)
.+.+++.++|..++..+..
T Consensus 321 -~~~~eL~~~i~~~~~~~~~ 339 (369)
T PF04464_consen 321 -YNFEELIEAIENIIENPDE 339 (369)
T ss_dssp -SSHHHHHHHHTTHHHHHHH
T ss_pred -CCHHHHHHHHHhhhhCCHH
Confidence 4789999999998865543
No 359
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi).
Probab=35.93 E-value=3e+02 Score=30.59 Aligned_cols=89 Identities=17% Similarity=0.228 Sum_probs=52.4
Q ss_pred HHHHHHHcCCCEEEEEecCccccC-CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh
Q 003042 316 VKELKEKFDGKIVILGVDDMDLFK-GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL 394 (854)
Q Consensus 316 ~~~l~~~~~~~~iil~VdRld~~K-Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~ 394 (854)
...+.+.|++ ..++-+|-.|..+ |+...++.++.+.++... +.-|-+- | |+ -.++-.++.+.-++
T Consensus 208 ~~~~~~~~p~-~~i~L~Dtyd~~~~~~~~~l~~~~~l~~~~~~----~~gvR~D--S-Gd---~~~~~~~~r~~l~~--- 273 (327)
T cd01570 208 FRAFAEAYPD-NFTLLVDTYDTLRSGLPNAIAVAKELGALGYR----LVGVRID--S-GD---LAYLSKEARKMLDE--- 273 (327)
T ss_pred HHHHHHHCCC-CcEEEEEcccchhhhHHHHHHHHHHHHhhCCC----ceEEEeC--C-CC---HHHHHHHHHHHHHH---
Confidence 4455577776 4466669999884 999999999887553322 2223222 1 22 22333333333333
Q ss_pred ccCCCCCccEE-EEcCCCChhhHHHHHHh
Q 003042 395 NFGKPGYEPIV-IIKEPLSTQDKVPYYAI 422 (854)
Q Consensus 395 ~~~~~~~~pv~-~~~~~~~~~el~aly~~ 422 (854)
.|+.|+. ++.+.++.+.+..++..
T Consensus 274 ----~G~~~~~Iv~Sdgld~~~i~~l~~~ 298 (327)
T cd01570 274 ----AGLTKVKIVASNDLDEYTIAALNAQ 298 (327)
T ss_pred ----CCCCCcEEEEeCCCCHHHHHHHHHC
Confidence 3444543 45677999999998874
No 360
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=35.60 E-value=42 Score=39.50 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=25.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.|...++ +.+ |.+... ++.|||.||.+|++.++..
T Consensus 176 ~Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 176 HKRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred HHHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCCcc
Confidence 3666555 444 544444 8999999999999999863
No 361
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=35.57 E-value=4.4 Score=49.48 Aligned_cols=51 Identities=22% Similarity=0.157 Sum_probs=32.1
Q ss_pred cCeEEEEeeC-CcchHHHHHHHHHHHhhCC--CCCCeEEEEeCCcccHHHHHHh
Q 003042 739 GQHIVEVKPQ-GVSKGIVVKNLISTMRSRG--KSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 739 g~~~vEI~p~-gvsKg~al~~ll~~l~~~g--i~~d~vlaiGDs~ND~~Mf~~a 789 (854)
+....|+.+. .+.||.++..+...+...+ -..=...++||+..|++-+..+
T Consensus 369 ~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivv 422 (732)
T KOG1050|consen 369 LYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVV 422 (732)
T ss_pred hHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEE
Confidence 3345566655 5778888888777664433 2223466789988886655544
No 362
>PLN00414 glycosyltransferase family protein
Probab=33.18 E-value=4.4e+02 Score=30.62 Aligned_cols=109 Identities=15% Similarity=0.176 Sum_probs=59.4
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE----ecCccccccC
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV----SEFIGCSPSL 482 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~~~l 482 (854)
+.+.+|+.++.+. ...++||- +-|+| ..+|+++++. |+|+ .|..--+..+
T Consensus 316 v~~w~PQ~~vL~h-~~v~~fvt---H~G~n-S~~Ea~~~Gv---------------------P~l~~P~~~dQ~~na~~~ 369 (446)
T PLN00414 316 WEGWVEQPLILSH-PSVGCFVN---HCGFG-SMWESLVSDC---------------------QIVFIPQLADQVLITRLL 369 (446)
T ss_pred EeccCCHHHHhcC-CccceEEe---cCchh-HHHHHHHcCC---------------------CEEecCcccchHHHHHHH
Confidence 3456788776543 33355652 57887 4579999833 3332 2221112222
Q ss_pred ----CCceEeCC-----CCHHHHHHHHHHHhcCCHHHH---HHHHHHHhccc-cccChHHHHHHHHHHHHHH
Q 003042 483 ----SGAIRVNP-----WNVDAVADAMDSALQMENQEK---ILRHEKHYKYI-SSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 483 ----~~ai~vnP-----~d~~~~A~ai~~aL~m~~~er---~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 541 (854)
.-|+.+.. -+.+++++++++++..+.+++ +.+.+++++.. ..-....+..+|++++.+.
T Consensus 370 ~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 370 TEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred HHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 22455532 467999999999997653221 22223333333 3333356688888887553
No 363
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=32.53 E-value=7.5e+02 Score=27.98 Aligned_cols=79 Identities=13% Similarity=0.178 Sum_probs=43.5
Q ss_pred cEEEEEEecCCCCCh--hHHHHHHHHHHHHHHHHhhcc-CCCCCccEEEEc-CCCChhhHHHHHHhCcEEEEccCccCCC
Q 003042 361 KVVLVQITNPARSSG--KDVQDLLSDTNRIAEEINLNF-GKPGYEPIVIIK-EPLSTQDKVPYYAIAECCVVNCVRDGMN 436 (854)
Q Consensus 361 ~vvLvqi~~p~r~~~--~~~~~l~~~v~~~v~~In~~~-~~~~~~pv~~~~-~~~~~~el~aly~~ADv~vv~S~~EG~~ 436 (854)
++.+.+.++|..-.| -..++| ..+.+++.+-|-.- +..-+.|.++.+ .+++..-+..-+ +-.++.++|-.-+||
T Consensus 158 ~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~-a~~~it~~saSKtFN 235 (388)
T COG1168 158 RVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF-ADNSITLTSASKTFN 235 (388)
T ss_pred CccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh-hcceEEEeecccccc
Confidence 466888888864333 332333 34445555433222 123466666665 566666555544 334556667778888
Q ss_pred Cccee
Q 003042 437 LVPYK 441 (854)
Q Consensus 437 Lv~~E 441 (854)
|.-+.
T Consensus 236 laGL~ 240 (388)
T COG1168 236 LAGLK 240 (388)
T ss_pred chhhh
Confidence 76443
No 364
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=29.55 E-value=4.9e+02 Score=30.77 Aligned_cols=79 Identities=6% Similarity=0.037 Sum_probs=49.6
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----cc
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CS 479 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 479 (854)
-+++.+.+|+.++.+- ..+++||- +-|+| ...||+.++. |+|+--..+ -+
T Consensus 347 Nv~i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~Gv---------------------P~v~iP~~~DQ~~Na 400 (507)
T PHA03392 347 NVLTQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDALV---------------------PMVGLPMMGDQFYNT 400 (507)
T ss_pred ceEEecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHcCC---------------------CEEECCCCccHHHHH
Confidence 4456678888776542 56777773 56766 6679999843 444433322 11
Q ss_pred ccC---CCceEeCC--CCHHHHHHHHHHHhcCCH
Q 003042 480 PSL---SGAIRVNP--WNVDAVADAMDSALQMEN 508 (854)
Q Consensus 480 ~~l---~~ai~vnP--~d~~~~A~ai~~aL~m~~ 508 (854)
.-+ ..|+.+++ .+.+++++||.++|+.+.
T Consensus 401 ~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~ 434 (507)
T PHA03392 401 NKYVELGIGRALDTVTVSAAQLVLAIVDVIENPK 434 (507)
T ss_pred HHHHHcCcEEEeccCCcCHHHHHHHHHHHhCCHH
Confidence 111 22666654 467999999999998754
No 365
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=29.33 E-value=4e+02 Score=32.97 Aligned_cols=130 Identities=12% Similarity=0.135 Sum_probs=83.1
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCC-CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHP-DLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p-~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
+..+++.+-|+..-|-..+.++=..++...-- ++..++++|..|-..-++. .-.++-+.+...++.||.+- .
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~-~aK~iIk~I~~~a~~in~~l------k 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY-AAKEIIKLINDVADVINNKL------K 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch-HHHHHHHHHHHHHHhhcccc------e
Confidence 45688999999999988777766666555433 5556677676664432332 22456777888888888632 4
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
|+|+.. .+-.--..++.+|||=..+|+ .++|| |+.++ |-.++ .|.+-+|..-|+..++
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~------a~~EA--SGTsn--MK~al----------NGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPT------AGKEA--SGTSN--MKAAL----------NGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCC------CCccc--cCcCc--chHHh----------cCCceeeccccHHHHH
Confidence 777764 333334467899999877775 45664 32211 11111 3788888888886665
No 366
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=28.24 E-value=4.8e+02 Score=32.59 Aligned_cols=136 Identities=12% Similarity=0.062 Sum_probs=84.6
Q ss_pred CCEEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 325 GKIVILGVDDMDLFKGISL-KFLAMGQLLE--QHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
+...++.+-|+..-|-..+ .|.-++++.+ .+|+.. ..+++|..|-..-++. .-.++-+.+..++..||..=...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH-MAKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH-HHHHHHHHHHHHHHHhccChhhCC
Confidence 4456788999999998777 6666665533 456541 2466776665543332 224567788888888886544445
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccc
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (854)
.-.|+|+.. ..-.--..++.+|||-.-+|+ .++|| |+.++ |-.++ .|.+-+|..-|+..
T Consensus 605 ~lkVVFlen-Y~VslAe~iipaaDvseqist------ag~EA--SGTsn--MK~al----------NGaltlgtlDGanv 663 (794)
T TIGR02093 605 KLKVVFVPN-YNVSLAELIIPAADLSEQIST------AGKEA--SGTGN--MKFML----------NGALTIGTLDGANV 663 (794)
T ss_pred ceeEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccc--cCcch--hHHHh----------cCcceeecccchhH
Confidence 556888875 444445578999999777765 55563 22211 11111 36777777777755
Q ss_pred cC
Q 003042 481 SL 482 (854)
Q Consensus 481 ~l 482 (854)
++
T Consensus 664 Ei 665 (794)
T TIGR02093 664 EI 665 (794)
T ss_pred HH
Confidence 55
No 367
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=28.22 E-value=1.1e+02 Score=30.06 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
-|...++.+.+.+. .....++++|||..+|..+.+.+|..
T Consensus 102 ~K~~~l~~i~~~~~--~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 102 FKIACLRDIKSLFP--PQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcC--CCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 47778888887651 12346788899999999999999984
No 368
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=27.84 E-value=2.5e+02 Score=34.92 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=84.2
Q ss_pred CCEEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 325 GKIVILGVDDMDLFKGISL-KFLAMGQLLE--QHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
+.-.++.+-|+..-|-..+ .|.-.+++.+ .+|+.. ..+++|..|-..-++. .-.++-+.+..++..||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhcCChhhCC
Confidence 3456788999999998777 6666665543 456532 3467776665443332 224566788888888886544445
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccc
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (854)
.-.|+|+.. ..-.--..++.+|||-.-+|+ .++|| |+.++ |-.+. .|++-+|..-|+..
T Consensus 607 ~lkVVFlen-Y~VslAe~lipaaDvseqis~------ag~EA--SGTsn--MK~am----------NGaLtlgtlDGanv 665 (798)
T PRK14985 607 KLKVVFLPD-YCVSAAELLIPAADISEQIST------AGKEA--SGTGN--MKLAL----------NGALTVGTLDGANV 665 (798)
T ss_pred ceeEEEeCC-CChHHHHHHhhhhhhhhhCCC------CCccc--cCcch--hHHHh----------cCceeeecccchHH
Confidence 556888874 444455578999999777665 55664 22211 11111 36788888877755
Q ss_pred cC
Q 003042 481 SL 482 (854)
Q Consensus 481 ~l 482 (854)
++
T Consensus 666 Ei 667 (798)
T PRK14985 666 EI 667 (798)
T ss_pred HH
Confidence 44
No 369
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=26.72 E-value=3.5e+02 Score=31.93 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=66.6
Q ss_pred EEEecCccccCCHHHHHHHHHHHHH-hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEE
Q 003042 329 ILGVDDMDLFKGISLKFLAMGQLLE-QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVII 407 (854)
Q Consensus 329 il~VdRld~~KGi~~~l~A~~~ll~-~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~ 407 (854)
++++.|----|.+..+|-|+..+.+ ++..-+++---++|-.|+ .||..++++.+.++....+ ..-+.++
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PT-------RELA~QV~~~~~~~~~~~~---~~~~cvy 200 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPT-------RELAVQVQAEAREFGKSLR---LRSTCVY 200 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCc-------HHHHHHHHHHHHHHcCCCC---ccEEEEe
Confidence 6788999999999999999999887 333333332233334566 4788888887777665543 2334555
Q ss_pred cCCCChhhHHHHHHhCcEEEEccCc
Q 003042 408 KEPLSTQDKVPYYAIAECCVVNCVR 432 (854)
Q Consensus 408 ~~~~~~~el~aly~~ADv~vv~S~~ 432 (854)
+|.--..++..+-+.+||+|-|+-|
T Consensus 201 GG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 201 GGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred CCCCccHHHHHHhcCCcEEEeCChH
Confidence 5554557899999999999999854
No 370
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=26.70 E-value=84 Score=29.64 Aligned_cols=51 Identities=20% Similarity=0.116 Sum_probs=36.7
Q ss_pred CeEEEEecCCCCCCCCCCCC------CCCHHHHHHHHHcccCCCCeEEEEcCCCccch
Q 003042 585 SRLILLDYDGTVMPQTSEDK------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~------~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l 636 (854)
.+++.+|+|+|+-|...+.+ .+-+.....|..| ++.|++.+++|--....+
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dL-k~~GVtl~~ASRt~ap~i 74 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDL-KKLGVTLIHASRTMAPQI 74 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHH-HhcCcEEEEecCCCCHHH
Confidence 38899999999998543221 2346677888888 888999999886554433
No 371
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=25.34 E-value=45 Score=39.27 Aligned_cols=15 Identities=27% Similarity=0.501 Sum_probs=13.2
Q ss_pred CeEEEEecCCCCCCC
Q 003042 585 SRLILLDYDGTVMPQ 599 (854)
Q Consensus 585 ~klI~~DlDGTLl~~ 599 (854)
.+.++||+||||+..
T Consensus 22 ~~~~~FDfDGTLt~~ 36 (497)
T PLN02177 22 NQTVAADLDGTLLIS 36 (497)
T ss_pred ccEEEEecCCcccCC
Confidence 568999999999983
No 372
>TIGR01513 NAPRTase_put putative nicotinate phosphoribosyltransferase. Most members of this family are Gram-positive bacteria. An additional set of mutually closely related archaeal sequences score between the trusted and noise cutoffs.
Probab=25.34 E-value=6.8e+02 Score=29.11 Aligned_cols=106 Identities=19% Similarity=0.230 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCEEEEEecCccccC-CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHh
Q 003042 315 KVKELKEKFDGKIVILGVDDMDLFK-GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEIN 393 (854)
Q Consensus 315 ~~~~l~~~~~~~~iil~VdRld~~K-Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In 393 (854)
....+.+.|++.. ++-+|-.|..+ |+...++.+..|.++. ...-| |-+..+...+-.++.+..++.
T Consensus 207 Af~~~~~~~p~~~-i~L~DTyd~~~sg~~~~~~~~~~l~~~~-----~~~gV------R~DSGD~~~l~~~vr~~ld~~- 273 (443)
T TIGR01513 207 AFRAYAKLYPKAT-VLLVDTYDTLRSGLPNAIAVAKELGEQG-----KVVGV------RIDSGDLLYLSKQARKQLDAA- 273 (443)
T ss_pred HHHHHHHHcCCCc-EEEEEcCCCchhhHHHHHHHHHHHhhhc-----CceeE------ecCCCCHHHHHHHHHHHHHHc-
Confidence 3445556776654 55599999888 9999999998753331 11112 112222234444444444442
Q ss_pred hccCCCCCccEE-EEcCCCChhhHHHHHHh---CcEE-----EEccC-ccCCCCcc
Q 003042 394 LNFGKPGYEPIV-IIKEPLSTQDKVPYYAI---AECC-----VVNCV-RDGMNLVP 439 (854)
Q Consensus 394 ~~~~~~~~~pv~-~~~~~~~~~el~aly~~---ADv~-----vv~S~-~EG~~Lv~ 439 (854)
|+.++. ++.+.++.+.+..|... +|+| ++++. ++.+|.|.
T Consensus 274 ------G~~~vkIi~S~gLde~~i~~l~~~g~~~d~fGvGt~L~t~~~~~~l~~v~ 323 (443)
T TIGR01513 274 ------GLTQVKIVVSNDLDENSIAALKAEGAPIDVYGVGTSLVTASDAPALGGVY 323 (443)
T ss_pred ------CCCCcEEEEeCCCCHHHHHHHHHCCCceeEEecCcceeecCCCCccceEE
Confidence 344444 44577999999998876 5777 55553 45566553
No 373
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=25.29 E-value=3.9e+02 Score=32.14 Aligned_cols=85 Identities=16% Similarity=0.224 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE-EEEcCCCChhhHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI-VIIKEPLSTQDKVPY 419 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv-~~~~~~~~~~el~al 419 (854)
-+..|..+.++|++-|+-+ |+...-|.-++ +..+.-+++ .|.+|- +.|..-...+|=..-
T Consensus 772 dP~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~-----------~Gl~p~riifs~va~k~eHvrr 832 (966)
T KOG4626|consen 772 DPSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQ-----------LGLEPDRIIFSPVAAKEEHVRR 832 (966)
T ss_pred CHHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHH-----------hCCCccceeeccccchHHHHHh
Confidence 3567889999999999765 77777776554 233333333 344442 233434456777888
Q ss_pred HHhCcEEEEccCccCCCCcceeeeee
Q 003042 420 YAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 420 y~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
+..||||+-|++.-|-- +-.|-+.+
T Consensus 833 ~~LaDv~LDTplcnGhT-Tg~dvLw~ 857 (966)
T KOG4626|consen 833 GQLADVCLDTPLCNGHT-TGMDVLWA 857 (966)
T ss_pred hhhhhhcccCcCcCCcc-cchhhhcc
Confidence 99999999999987754 33455554
No 374
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=24.79 E-value=1.2e+02 Score=31.70 Aligned_cols=61 Identities=16% Similarity=0.306 Sum_probs=38.4
Q ss_pred CHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcC-CCccchhhhh
Q 003042 572 GMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG-RGKDSLGNWF 640 (854)
Q Consensus 572 ~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TG-R~~~~l~~~~ 640 (854)
+...+++.|.+.-..+++.|+|||+.. . +.+.+.++++++..+.++.+.=| |+.+++++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g---~-----~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~ 92 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEG---K-----PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAY 92 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcC---C-----cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHH
Confidence 677888888776557999999999966 1 12345555554334454544333 4455666665
No 375
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=24.36 E-value=49 Score=35.95 Aligned_cols=41 Identities=27% Similarity=0.599 Sum_probs=31.2
Q ss_pred eCChhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHH
Q 003042 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKV 178 (854)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~ 178 (854)
|++.+.+-..|..|+|. +|+ +.+. ..|++++|++|...+..
T Consensus 272 ~~s~~~L~dlY~~~~k~--yPi--vSiE------DPFdqdDw~~w~~~~~~ 312 (433)
T KOG2670|consen 272 WLSGDQLADLYKSFIKD--YPI--VSIE------DPFDQDDWEAWSKFFKE 312 (433)
T ss_pred ccCHHHHHHHHHHHHhc--CCe--eeec------CCcchhhHHHHHHHhhc
Confidence 58889999999999998 455 2221 36999999999876654
No 376
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=24.19 E-value=69 Score=33.75 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=14.6
Q ss_pred cCCeEEEEecCCCCCC
Q 003042 583 TNSRLILLDYDGTVMP 598 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~ 598 (854)
+.+|+++||++|||+.
T Consensus 5 ~~iravtfD~~~tLl~ 20 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLA 20 (237)
T ss_pred cceEEEEEeCCCceee
Confidence 5689999999999997
No 377
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=23.66 E-value=5.7e+02 Score=29.26 Aligned_cols=100 Identities=11% Similarity=0.156 Sum_probs=59.0
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc----
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS---- 481 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~---- 481 (854)
+....+|+.+ ++..||++|-. -|+|.+ .|++..+. |+|+== .+ .++
T Consensus 287 ~v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gv---------------------P~vv~P-~~-~DQ~~nA 336 (406)
T COG1819 287 IVADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGV---------------------PLVVIP-DG-ADQPLNA 336 (406)
T ss_pred EEecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCC---------------------CEEEec-CC-cchhHHH
Confidence 3455666655 78899999854 688855 58888632 333321 11 333
Q ss_pred -----CCCc--eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 482 -----LSGA--IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 482 -----l~~a--i~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
+.-| +...++..+.++++++++|+++.-.+ +.+++++-...++...=+.+.+.+
T Consensus 337 ~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~--~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 337 ERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRR--AAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHH--HHHHHHHHhhhcccHHHHHHHHHH
Confidence 2224 44558999999999999998764332 233444445555554434433333
No 378
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=23.35 E-value=6.9e+02 Score=27.65 Aligned_cols=88 Identities=18% Similarity=0.207 Sum_probs=49.3
Q ss_pred CCCEEEEEecCccccCCHH-HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 324 DGKIVILGVDDMDLFKGIS-LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~-~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
.++.+++..|--.+.|--+ ..+.++.+.|.+. .++ ++.+|+|.. .+ . ..++++++.++ -.
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~~----vvl~ggp~e---~e---~-~~~~~i~~~~~-------~~ 242 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GYE----VVLTSGPDK---DD---L-ACVNEIAQGCQ-------TP 242 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CCe----EEEEcCCCh---HH---H-HHHHHHHHhcC-------CC
Confidence 3466778887666677654 2444444444332 232 455565431 11 1 11222222211 11
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEEcc
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv~S 430 (854)
+++-+.|..+..|+.++++.||++|-+-
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEecC
Confidence 3455678889999999999999998765
No 379
>KOG2648 consensus Diphthamide biosynthesis protein [Translation, ribosomal structure and biogenesis]
Probab=23.12 E-value=2.8e+02 Score=31.92 Aligned_cols=43 Identities=26% Similarity=0.461 Sum_probs=28.8
Q ss_pred HHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003042 314 QKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (854)
Q Consensus 314 ~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 371 (854)
+..+.+-+..+.|.+++.|||+-|.| |...|+. -++|||+.|-
T Consensus 286 ~~L~~~~~~~Gkk~y~l~~g~inPaK------------LAnF~eI---DvfV~iaCp~ 328 (453)
T KOG2648|consen 286 EHLRKLLKAAGKKSYVLALGEINPAK------------LANFPEI---DVFVQIACPR 328 (453)
T ss_pred HHHHHHHHHcCCceEEEEecCCCHHH------------hcCCccc---cEEEEEeCcc
Confidence 33333333334567899999999887 3345664 4799999874
No 380
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=23.09 E-value=9.5e+02 Score=25.74 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=26.3
Q ss_pred CCCEEEEEecCcc-ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003042 324 DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (854)
Q Consensus 324 ~~~~iil~VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 371 (854)
.|+..|+++.... +.++ .|.+-++++.|+ +++|++|.
T Consensus 174 dg~~~i~faSDvqGp~~~-----~~l~~i~e~~P~------v~ii~GPp 211 (304)
T COG2248 174 DGKSSIVFASDVQGPIND-----EALEFILEKRPD------VLIIGGPP 211 (304)
T ss_pred cCCeEEEEcccccCCCcc-----HHHHHHHhcCCC------EEEecCCc
Confidence 4667788888777 6666 567788999997 45566554
No 381
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=22.75 E-value=97 Score=33.99 Aligned_cols=67 Identities=13% Similarity=0.047 Sum_probs=43.7
Q ss_pred hhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---------CC
Q 003042 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---------SG 484 (854)
Q Consensus 414 ~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---------~~ 484 (854)
+++.++|..||++|..+ |++ +..|+++++ .|+|+.-..|-.++. .-
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g---------------------~P~l~ip~~~~~eQ~~na~~l~~~g~ 293 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLG---------------------KPLIVIPDLGQFEQGNNAVKLEDLGC 293 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcC---------------------CCEEEEcCCCcccHHHHHHHHHHCCC
Confidence 68999999999999876 555 478999984 366666665544432 22
Q ss_pred ceEeCCCCHHHHHHHHHHHhcC
Q 003042 485 AIRVNPWNVDAVADAMDSALQM 506 (854)
Q Consensus 485 ai~vnP~d~~~~A~ai~~aL~m 506 (854)
|+.++..+. ++.+++...+++
T Consensus 294 ~~~l~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 294 GIALEYKEL-RLLEAILDIRNM 314 (321)
T ss_pred EEEcChhhH-HHHHHHHhcccc
Confidence 566666555 444444444443
No 382
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=20.45 E-value=1.6e+03 Score=27.53 Aligned_cols=175 Identities=13% Similarity=0.060 Sum_probs=95.6
Q ss_pred CCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-------
Q 003042 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL------- 482 (854)
Q Consensus 410 ~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------- 482 (854)
..+.+....+++.-+++++|+-|+-.=+.++|+-..+ ++-+.+|++...-.++.+
T Consensus 233 Am~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~------------------~~~a~lIlTgg~~~~~~v~~l~~~a 294 (684)
T PRK05632 233 ARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG------------------PPIAGLLLTGGYEPDPRIAKLCEGA 294 (684)
T ss_pred ecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC------------------CCceEEEEcCCCCCCHHHHHHHhhc
Confidence 3456666777776666666666655445555542110 011345555433333322
Q ss_pred --CC-ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc-ChHHHHHHHHHHHHHHHHhcccccccccCCCcc
Q 003042 483 --SG-AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH-DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLG 558 (854)
Q Consensus 483 --~~-ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~ 558 (854)
.+ .++.-|+|+-+.|..|.++..--..+-..+-+....++.+| |..+|.+. +. ....
T Consensus 295 ~~~~ipVl~t~~dT~~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~----~~~~-------------- 355 (684)
T PRK05632 295 FETGLPVLSVDTNTYQTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT----ATSE-------------- 355 (684)
T ss_pred ccCCCCEEEecCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc----cCCC--------------
Confidence 12 46778999999999999775321111123345566666666 77776664 22 0000
Q ss_pred eeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhh
Q 003042 559 FRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (854)
Q Consensus 559 ~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~ 638 (854)
|...++|. .-...+.+.-+..++|+++-. . -.++++++...+ .+.|+.-.+.-|+.. .+++
T Consensus 356 -~~~~~~p~---~~~~~l~~~a~~~~~~i~~~e------------~-~d~~~l~Aa~~~-~~~g~~~~iLvG~~~-~I~~ 416 (684)
T PRK05632 356 -RSRRLSPP---AFRYQLTERARAAKKRIVLPE------------G-DEPRTLKAAAIC-LERGIADCVLLGNPE-EIRR 416 (684)
T ss_pred -CCCCcCHH---HHHHHHHHHHhcCCCEEEEeC------------C-CCHHHHHHHHHH-HHcCCceEEEECCHH-HHHH
Confidence 11123442 123455555555666766532 1 257888888886 778877777778763 4554
Q ss_pred hh
Q 003042 639 WF 640 (854)
Q Consensus 639 ~~ 640 (854)
.+
T Consensus 417 ~~ 418 (684)
T PRK05632 417 VA 418 (684)
T ss_pred HH
Confidence 44
No 383
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=20.25 E-value=1.4e+03 Score=26.71 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=53.6
Q ss_pred CCEEEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 325 GKIVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 325 ~~~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
|+.+.+.+.= .++...+...++-.+++.+...+ -|-+......-.| .++.+++..|-...+ .|
T Consensus 145 G~~~~~~i~yt~sp~~t~~y~~~~a~~l~~~Gad------~I~IkDtaG~l~P------~~v~~Lv~alk~~~~----~p 208 (468)
T PRK12581 145 GKEAQLCIAYTTSPVHTLNYYLSLVKELVEMGAD------SICIKDMAGILTP------KAAKELVSGIKAMTN----LP 208 (468)
T ss_pred CCEEEEEEEEEeCCcCcHHHHHHHHHHHHHcCCC------EEEECCCCCCcCH------HHHHHHHHHHHhccC----Ce
Confidence 5554333332 26677788888888777654433 2333333221222 345555555543222 24
Q ss_pred EEEEcCC---CC-hhhHHHHHHhCcEE--EEccCccCCCCcceeeeee
Q 003042 404 IVIIKEP---LS-TQDKVPYYAIAECC--VVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 404 v~~~~~~---~~-~~el~aly~~ADv~--vv~S~~EG~~Lv~~Ea~a~ 445 (854)
+.+.... +. -.-+.|+-..||++ -+.++.+|-|-++.|.++.
T Consensus 209 i~~H~Hnt~GlA~An~laAieAGad~vD~ai~g~g~gagN~~tE~lv~ 256 (468)
T PRK12581 209 LIVHTHATSGISQMTYLAAVEAGADRIDTALSPFSEGTSQPATESMYL 256 (468)
T ss_pred EEEEeCCCCccHHHHHHHHHHcCCCEEEeeccccCCCcCChhHHHHHH
Confidence 5443321 11 12344566666653 3445677777788887664
No 384
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=20.14 E-value=1.3e+03 Score=27.82 Aligned_cols=94 Identities=14% Similarity=0.066 Sum_probs=53.1
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCC---CC
Q 003042 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP---LS 412 (854)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~---~~ 412 (854)
++.-.+...++-.+++.+...+ -|-|......-.| .++.+++..|..+++ .|+.+.... +.
T Consensus 148 sp~~t~e~~~~~ak~l~~~Gad------~I~IkDtaG~l~P------~~v~~lv~alk~~~~----ipi~~H~Hnt~Gla 211 (596)
T PRK14042 148 SPVHTLDNFLELGKKLAEMGCD------SIAIKDMAGLLTP------TVTVELYAGLKQATG----LPVHLHSHSTSGLA 211 (596)
T ss_pred CCCCCHHHHHHHHHHHHHcCCC------EEEeCCcccCCCH------HHHHHHHHHHHhhcC----CEEEEEeCCCCCcH
Confidence 6777888888877777664432 2333333211222 345566666666654 355544321 11
Q ss_pred -hhhHHHHHHhCcEE--EEccCccCCCCcceeeeee
Q 003042 413 -TQDKVPYYAIAECC--VVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 413 -~~el~aly~~ADv~--vv~S~~EG~~Lv~~Ea~a~ 445 (854)
-.-+.|+-..||++ -+.++.+|-|-++.|.++.
T Consensus 212 ~an~laAieaGad~iD~ai~glGg~tGn~~tE~lv~ 247 (596)
T PRK14042 212 SICHYEAVLAGCNHIDTAISSFSGGASHPPTEALVA 247 (596)
T ss_pred HHHHHHHHHhCCCEEEeccccccCCCCcHhHHHHHH
Confidence 22355666667763 3455678888888887765
Done!