Query 003046
Match_columns 854
No_of_seqs 954 out of 4837
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 15:57:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003046.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003046hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03150 hypothetical protein; 100.0 7.2E-71 1.6E-75 651.2 39.5 436 1-451 70-532 (623)
2 PLN00113 leucine-rich repeat r 100.0 5.2E-56 1.1E-60 558.7 35.4 510 263-805 426-953 (968)
3 PF12819 Malectin_like: Carboh 100.0 5.3E-54 1.1E-58 472.2 26.5 279 1-292 52-347 (347)
4 KOG1187 Serine/threonine prote 100.0 2.1E-53 4.5E-58 469.5 26.9 288 514-804 61-353 (361)
5 KOG0192 Tyrosine kinase specif 100.0 1.6E-44 3.4E-49 396.1 22.8 254 530-805 45-305 (362)
6 KOG0197 Tyrosine kinases [Sign 100.0 4.1E-44 8.8E-49 390.8 16.8 261 522-805 202-463 (468)
7 KOG0581 Mitogen-activated prot 100.0 1.2E-43 2.5E-48 370.6 19.5 256 518-799 76-335 (364)
8 KOG0591 NIMA (never in mitosis 100.0 6.3E-44 1.4E-48 356.6 9.7 259 526-802 19-284 (375)
9 KOG0615 Serine/threonine prote 100.0 1.6E-43 3.5E-48 371.0 12.8 253 525-799 171-437 (475)
10 KOG0575 Polo-like serine/threo 100.0 8.8E-43 1.9E-47 383.4 18.3 248 526-799 18-269 (592)
11 KOG0595 Serine/threonine-prote 100.0 1.2E-42 2.5E-47 365.6 17.2 198 528-734 12-218 (429)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 1E-42 2.3E-47 387.9 8.7 264 521-807 624-895 (996)
13 KOG1026 Nerve growth factor re 100.0 3.2E-41 6.9E-46 384.7 13.3 262 524-805 484-764 (774)
14 KOG0593 Predicted protein kina 100.0 1.5E-40 3.2E-45 335.7 13.8 272 530-809 6-296 (396)
15 KOG0598 Ribosomal protein S6 k 100.0 5.1E-40 1.1E-44 343.3 13.5 246 529-799 28-281 (357)
16 KOG0600 Cdc2-related protein k 100.0 3E-39 6.5E-44 346.9 16.6 260 529-799 120-400 (560)
17 KOG0193 Serine/threonine prote 100.0 5.1E-39 1.1E-43 351.6 17.0 264 520-805 386-655 (678)
18 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.4E-39 1.6E-43 355.2 18.6 262 525-805 6-336 (338)
19 KOG0592 3-phosphoinositide-dep 100.0 6.6E-39 1.4E-43 346.9 17.5 247 528-799 75-338 (604)
20 KOG0659 Cdk activating kinase 100.0 1.8E-38 3.9E-43 316.0 19.1 262 527-799 3-281 (318)
21 KOG0198 MEKK and related serin 100.0 8E-39 1.7E-43 340.7 17.6 254 528-802 19-279 (313)
22 KOG0582 Ste20-like serine/thre 100.0 2.2E-38 4.8E-43 335.4 20.3 260 527-799 27-293 (516)
23 KOG0578 p21-activated serine/t 100.0 1.7E-38 3.7E-43 347.0 17.5 245 531-799 278-523 (550)
24 KOG1095 Protein tyrosine kinas 100.0 4.3E-39 9.4E-44 379.9 13.7 266 522-807 688-965 (1025)
25 KOG0661 MAPK related serine/th 100.0 3.2E-39 6.9E-44 344.3 10.7 266 525-799 9-291 (538)
26 KOG4721 Serine/threonine prote 100.0 9.4E-39 2E-43 344.3 14.3 239 532-803 130-368 (904)
27 KOG0583 Serine/threonine prote 100.0 6.2E-38 1.3E-42 347.1 21.3 248 527-799 18-275 (370)
28 PHA02988 hypothetical protein; 100.0 1.8E-37 3.9E-42 335.4 21.4 246 532-804 26-280 (283)
29 KOG0194 Protein tyrosine kinas 100.0 9.9E-39 2.2E-43 354.3 11.6 256 529-807 160-424 (474)
30 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-37 3.2E-42 339.4 19.3 263 526-801 5-303 (304)
31 KOG0597 Serine-threonine prote 100.0 5.2E-38 1.1E-42 339.1 14.9 245 528-799 4-251 (808)
32 cd05064 PTKc_EphR_A10 Catalyti 100.0 9.6E-38 2.1E-42 334.2 16.8 256 525-803 4-265 (266)
33 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-37 3.2E-42 349.5 18.6 260 525-803 34-374 (375)
34 KOG0588 Serine/threonine prote 100.0 1.6E-37 3.4E-42 342.3 17.1 245 528-799 14-263 (786)
35 KOG0580 Serine/threonine prote 100.0 5.3E-38 1.2E-42 308.5 11.9 255 515-800 16-274 (281)
36 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-37 7.2E-42 333.6 18.8 249 530-799 4-261 (285)
37 KOG0658 Glycogen synthase kina 100.0 5.9E-38 1.3E-42 327.1 12.2 256 531-799 29-306 (364)
38 KOG0605 NDR and related serine 100.0 3E-37 6.5E-42 334.6 18.1 248 530-799 145-445 (550)
39 KOG1094 Discoidin domain recep 100.0 1.2E-37 2.6E-42 337.4 14.7 271 518-803 530-804 (807)
40 cd05106 PTKc_CSF-1R Catalytic 100.0 3E-37 6.6E-42 346.8 18.3 262 524-804 36-373 (374)
41 cd05068 PTKc_Frk_like Catalyti 100.0 4.2E-37 9.2E-42 327.9 18.3 255 525-802 5-260 (261)
42 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-36 2.5E-41 329.3 20.7 265 528-799 3-284 (287)
43 cd05571 STKc_PKB Catalytic dom 100.0 3E-37 6.6E-42 340.1 16.3 242 532-799 1-251 (323)
44 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.2E-37 9.2E-42 340.5 16.8 250 529-799 4-257 (333)
45 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8E-37 1.7E-41 324.8 18.1 249 528-800 6-255 (256)
46 cd05072 PTKc_Lyn Catalytic dom 100.0 6.3E-37 1.4E-41 326.4 17.2 254 526-802 6-260 (261)
47 cd05148 PTKc_Srm_Brk Catalytic 100.0 9.3E-37 2E-41 325.0 18.0 254 526-802 6-260 (261)
48 cd05052 PTKc_Abl Catalytic dom 100.0 8.2E-37 1.8E-41 326.2 17.5 253 528-803 8-262 (263)
49 KOG0616 cAMP-dependent protein 100.0 5.8E-37 1.3E-41 309.4 14.7 239 518-790 41-283 (355)
50 KOG0201 Serine/threonine prote 100.0 9.3E-38 2E-42 330.9 9.2 244 531-799 18-263 (467)
51 cd05585 STKc_YPK1_like Catalyt 100.0 9.7E-37 2.1E-41 334.4 17.2 240 534-799 1-247 (312)
52 cd05049 PTKc_Trk Catalytic dom 100.0 1.5E-36 3.4E-41 326.8 18.4 257 525-801 4-279 (280)
53 cd05612 STKc_PRKX_like Catalyt 100.0 5.2E-37 1.1E-41 333.1 14.7 243 528-799 3-254 (291)
54 PF07714 Pkinase_Tyr: Protein 100.0 3.6E-37 7.8E-42 328.5 13.2 248 531-800 4-259 (259)
55 cd05048 PTKc_Ror Catalytic Dom 100.0 1.4E-36 3E-41 327.8 17.7 255 528-802 7-282 (283)
56 cd05608 STKc_GRK1 Catalytic do 100.0 2.6E-36 5.7E-41 325.7 19.6 248 534-799 1-257 (280)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 2.8E-36 6E-41 333.7 20.2 261 527-800 6-302 (331)
58 PTZ00267 NIMA-related protein 100.0 1.7E-36 3.7E-41 351.4 19.2 252 528-799 69-323 (478)
59 cd05595 STKc_PKB_beta Catalyti 100.0 1.2E-36 2.5E-41 335.5 17.0 242 532-799 1-251 (323)
60 cd05033 PTKc_EphR Catalytic do 100.0 2.3E-36 5E-41 323.2 18.8 254 527-803 5-265 (266)
61 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.8E-36 3.9E-41 328.3 18.1 264 528-799 7-285 (288)
62 PTZ00263 protein kinase A cata 100.0 6.9E-37 1.5E-41 338.2 14.8 243 528-799 20-271 (329)
63 cd05059 PTKc_Tec_like Catalyti 100.0 2.8E-36 6.1E-41 320.7 18.6 249 528-800 6-255 (256)
64 cd05593 STKc_PKB_gamma Catalyt 100.0 1.5E-36 3.2E-41 335.3 17.0 242 532-799 1-251 (328)
65 cd05054 PTKc_VEGFR Catalytic d 100.0 2.7E-36 5.8E-41 334.5 19.0 262 525-805 6-335 (337)
66 KOG0611 Predicted serine/threo 100.0 2.4E-36 5.1E-41 314.3 17.0 249 524-800 51-304 (668)
67 KOG0585 Ca2+/calmodulin-depend 100.0 1E-36 2.2E-41 324.4 14.6 252 527-801 98-374 (576)
68 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.6E-36 5.7E-41 341.0 18.8 261 525-804 36-398 (400)
69 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.4E-36 5.3E-41 321.4 17.3 250 528-801 6-256 (256)
70 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.7E-36 1.2E-40 319.0 20.1 253 526-802 6-259 (260)
71 KOG1989 ARK protein kinase fam 100.0 2.7E-36 5.9E-41 346.3 18.7 256 528-806 39-314 (738)
72 KOG4278 Protein tyrosine kinas 100.0 4.2E-37 9.1E-42 333.5 11.3 261 522-805 263-525 (1157)
73 cd05108 PTKc_EGFR Catalytic do 100.0 2.6E-36 5.7E-41 331.6 17.8 256 526-805 7-270 (316)
74 cd05071 PTKc_Src Catalytic dom 100.0 4.4E-36 9.6E-41 320.5 19.0 255 526-804 6-261 (262)
75 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.3E-36 1.6E-40 322.4 20.4 265 529-803 7-281 (283)
76 KOG3653 Transforming growth fa 100.0 2.1E-36 4.6E-41 322.5 15.5 259 530-805 214-505 (534)
77 cd05093 PTKc_TrkB Catalytic do 100.0 4.9E-36 1.1E-40 324.8 18.6 261 525-805 4-281 (288)
78 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.7E-36 1.2E-40 319.0 18.6 256 523-802 3-259 (260)
79 cd05094 PTKc_TrkC Catalytic do 100.0 5E-36 1.1E-40 325.3 18.4 258 528-805 7-284 (291)
80 KOG0589 Serine/threonine prote 100.0 3.7E-36 8.1E-41 327.7 17.4 250 527-799 5-258 (426)
81 cd06650 PKc_MEK1 Catalytic dom 100.0 1.7E-35 3.7E-40 327.5 23.0 200 525-733 4-205 (333)
82 cd05614 STKc_MSK2_N N-terminal 100.0 3.9E-36 8.4E-41 332.6 17.5 250 529-799 3-267 (332)
83 PLN00034 mitogen-activated pro 100.0 9.6E-36 2.1E-40 332.4 20.7 244 530-799 78-328 (353)
84 cd07862 STKc_CDK6 Catalytic do 100.0 5.1E-36 1.1E-40 324.7 17.8 264 528-799 3-287 (290)
85 cd05584 STKc_p70S6K Catalytic 100.0 4.1E-36 8.9E-41 331.1 17.2 242 532-799 2-256 (323)
86 cd05084 PTKc_Fes Catalytic dom 100.0 8E-36 1.7E-40 316.2 18.6 247 532-801 1-251 (252)
87 cd05085 PTKc_Fer Catalytic dom 100.0 8.8E-36 1.9E-40 315.3 18.9 247 532-801 1-249 (250)
88 cd05618 STKc_aPKC_iota Catalyt 100.0 9.1E-36 2E-40 329.2 19.6 250 532-799 1-262 (329)
89 cd08228 STKc_Nek6 Catalytic do 100.0 3.3E-35 7.1E-40 314.2 23.1 258 528-803 4-265 (267)
90 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-35 3.4E-40 323.3 21.1 261 528-799 7-288 (303)
91 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-36 4.4E-41 333.8 14.2 242 532-799 1-252 (325)
92 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-35 3.4E-40 309.8 20.0 266 530-803 15-308 (323)
93 PTZ00426 cAMP-dependent protei 100.0 2.9E-36 6.2E-41 334.5 15.2 244 527-799 31-284 (340)
94 KOG2345 Serine/threonine prote 100.0 7.8E-37 1.7E-41 301.5 9.3 265 525-804 20-301 (302)
95 cd05588 STKc_aPKC Catalytic do 100.0 1E-35 2.2E-40 328.8 19.3 250 532-799 1-262 (329)
96 cd05090 PTKc_Ror1 Catalytic do 100.0 7.9E-36 1.7E-40 322.2 17.9 255 528-802 7-282 (283)
97 cd05592 STKc_nPKC_theta_delta 100.0 5.6E-36 1.2E-40 329.0 16.9 242 532-799 1-248 (316)
98 cd05591 STKc_nPKC_epsilon Cata 100.0 5.1E-36 1.1E-40 330.1 16.7 242 532-799 1-254 (321)
99 PHA03212 serine/threonine kina 100.0 1.9E-35 4.1E-40 333.7 21.6 259 527-799 93-376 (391)
100 cd05596 STKc_ROCK Catalytic do 100.0 5.9E-36 1.3E-40 336.0 17.4 251 527-799 44-304 (370)
101 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-35 2.7E-40 321.8 19.3 257 529-805 3-288 (290)
102 KOG0694 Serine/threonine prote 100.0 4.6E-36 9.9E-41 333.9 16.0 238 529-793 371-613 (694)
103 cd05062 PTKc_IGF-1R Catalytic 100.0 7.1E-36 1.5E-40 321.5 17.1 257 526-802 6-277 (277)
104 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-36 3.7E-41 337.8 12.7 250 528-799 3-285 (350)
105 cd05091 PTKc_Ror2 Catalytic do 100.0 9.7E-36 2.1E-40 321.4 18.1 257 526-802 5-282 (283)
106 cd08229 STKc_Nek7 Catalytic do 100.0 3E-35 6.5E-40 314.5 21.4 258 528-803 4-265 (267)
107 cd05053 PTKc_FGFR Catalytic do 100.0 8.4E-36 1.8E-40 323.5 17.3 259 526-804 12-292 (293)
108 cd05116 PTKc_Syk Catalytic dom 100.0 1.4E-35 3.1E-40 315.5 18.7 246 533-803 2-255 (257)
109 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.5E-35 3.2E-40 328.4 19.6 264 528-799 2-290 (338)
110 cd05590 STKc_nPKC_eta Catalyti 100.0 5.7E-36 1.2E-40 329.5 16.2 242 532-799 1-253 (320)
111 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.6E-35 3.5E-40 334.5 20.1 263 523-804 34-400 (401)
112 cd05069 PTKc_Yes Catalytic dom 100.0 1.7E-35 3.7E-40 315.4 19.2 253 526-802 6-259 (260)
113 cd05626 STKc_LATS2 Catalytic d 100.0 8.8E-36 1.9E-40 336.1 17.8 249 530-799 5-305 (381)
114 PTZ00283 serine/threonine prot 100.0 9.2E-36 2E-40 345.7 18.2 253 527-799 33-297 (496)
115 KOG0663 Protein kinase PITSLRE 100.0 2.8E-35 6.1E-40 301.3 19.4 271 515-799 70-361 (419)
116 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.4E-35 9.5E-40 312.8 22.0 258 528-803 4-265 (267)
117 KOG4257 Focal adhesion tyrosin 100.0 1.1E-35 2.3E-40 323.7 17.2 262 522-807 385-653 (974)
118 cd05619 STKc_nPKC_theta Cataly 100.0 1.3E-35 2.9E-40 325.9 18.3 242 532-799 1-248 (316)
119 cd05115 PTKc_Zap-70 Catalytic 100.0 2.4E-35 5.2E-40 314.0 19.6 247 533-803 2-255 (257)
120 cd05599 STKc_NDR_like Catalyti 100.0 4.6E-36 1E-40 336.3 14.7 249 529-799 4-296 (364)
121 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-35 2.3E-40 333.2 17.6 199 529-734 4-240 (363)
122 cd05605 STKc_GRK4_like Catalyt 100.0 1.7E-35 3.6E-40 320.3 18.4 250 529-799 3-261 (285)
123 cd05621 STKc_ROCK2 Catalytic d 100.0 1.1E-35 2.5E-40 333.4 17.7 251 527-799 44-304 (370)
124 cd05035 PTKc_Axl_like Catalyti 100.0 2E-35 4.3E-40 316.6 18.8 254 530-803 3-272 (273)
125 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-35 3.8E-40 315.2 18.2 255 525-802 5-260 (261)
126 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.8E-35 4E-40 327.5 19.1 264 523-806 9-296 (334)
127 cd05620 STKc_nPKC_delta Cataly 100.0 1E-35 2.2E-40 326.9 16.6 242 532-799 1-248 (316)
128 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.7E-35 3.7E-40 323.7 18.2 262 525-806 17-302 (307)
129 PTZ00036 glycogen synthase kin 100.0 1.2E-35 2.5E-40 340.6 17.6 263 527-799 67-351 (440)
130 cd05601 STKc_CRIK Catalytic do 100.0 3.3E-36 7.1E-41 332.9 12.6 250 529-799 4-263 (330)
131 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.3E-35 2.8E-40 320.6 16.8 262 527-803 5-283 (284)
132 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-35 2.4E-40 327.8 16.6 243 530-799 3-257 (324)
133 cd05063 PTKc_EphR_A2 Catalytic 100.0 2E-35 4.3E-40 316.2 17.8 253 528-803 7-267 (268)
134 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-35 2.8E-40 327.3 16.8 245 529-799 3-257 (324)
135 cd05111 PTK_HER3 Pseudokinase 100.0 2.8E-35 6.2E-40 317.4 19.1 253 529-805 10-270 (279)
136 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.6E-35 3.5E-40 318.9 17.0 255 527-801 7-276 (277)
137 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.4E-35 5.2E-40 322.0 18.7 264 524-807 13-300 (304)
138 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-35 3.1E-40 326.1 16.6 242 532-799 1-252 (318)
139 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-35 4.7E-40 320.9 17.8 264 525-801 4-294 (295)
140 cd05075 PTKc_Axl Catalytic dom 100.0 3.4E-35 7.4E-40 314.9 19.0 254 530-803 3-271 (272)
141 cd05043 PTK_Ryk Pseudokinase d 100.0 2.2E-35 4.8E-40 318.0 17.6 261 525-805 5-278 (280)
142 cd06646 STKc_MAP4K5 Catalytic 100.0 5.9E-35 1.3E-39 312.3 20.6 253 527-800 10-266 (267)
143 cd05089 PTKc_Tie1 Catalytic do 100.0 3.2E-35 6.9E-40 320.0 18.5 258 528-807 4-279 (297)
144 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-35 2.7E-40 327.3 15.5 242 532-799 1-251 (323)
145 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-35 4.1E-40 317.8 16.4 257 525-801 5-276 (277)
146 cd05047 PTKc_Tie Catalytic dom 100.0 4.8E-35 1E-39 313.9 19.4 251 532-804 1-269 (270)
147 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.9E-35 1.1E-39 323.1 20.0 249 532-799 1-260 (327)
148 cd05095 PTKc_DDR2 Catalytic do 100.0 4.3E-35 9.3E-40 318.7 19.3 264 526-802 5-296 (296)
149 cd05088 PTKc_Tie2 Catalytic do 100.0 3E-35 6.5E-40 321.3 18.1 259 527-807 8-284 (303)
150 cd05051 PTKc_DDR Catalytic dom 100.0 4E-35 8.6E-40 318.6 18.7 262 527-801 6-295 (296)
151 cd05073 PTKc_Hck Catalytic dom 100.0 3E-35 6.4E-40 313.6 17.3 254 525-802 5-259 (260)
152 cd08529 STKc_FA2-like Catalyti 100.0 4.7E-35 1E-39 310.6 18.8 248 529-799 3-253 (256)
153 cd05582 STKc_RSK_N N-terminal 100.0 7.1E-36 1.5E-40 328.5 12.9 238 532-795 2-245 (318)
154 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.7E-35 8.1E-40 326.3 18.7 263 524-805 5-341 (343)
155 cd06625 STKc_MEKK3_like Cataly 100.0 7.2E-35 1.6E-39 310.6 20.2 249 528-799 4-260 (263)
156 KOG0660 Mitogen-activated prot 100.0 1.9E-35 4.1E-40 307.9 15.0 258 531-799 27-310 (359)
157 cd05065 PTKc_EphR_B Catalytic 100.0 2.5E-35 5.3E-40 315.8 16.5 254 527-803 5-268 (269)
158 cd05092 PTKc_TrkA Catalytic do 100.0 2.6E-35 5.6E-40 317.8 16.8 254 528-801 7-279 (280)
159 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-35 3.7E-40 334.0 15.9 248 530-799 5-305 (382)
160 KOG0032 Ca2+/calmodulin-depend 100.0 6.4E-35 1.4E-39 322.9 20.1 251 525-799 34-293 (382)
161 KOG2052 Activin A type IB rece 100.0 1E-34 2.2E-39 307.6 20.5 261 529-805 214-505 (513)
162 cd05629 STKc_NDR_like_fungal C 100.0 1.5E-35 3.2E-40 333.9 15.3 249 529-799 4-305 (377)
163 cd05616 STKc_cPKC_beta Catalyt 100.0 2.5E-35 5.4E-40 324.9 16.7 245 529-799 3-257 (323)
164 cd05112 PTKc_Itk Catalytic dom 100.0 3.8E-35 8.2E-40 311.6 17.4 250 528-801 6-256 (256)
165 cd05607 STKc_GRK7 Catalytic do 100.0 1.1E-34 2.5E-39 312.4 21.3 248 534-801 1-252 (277)
166 cd05060 PTKc_Syk_like Catalyti 100.0 7.5E-35 1.6E-39 309.8 19.6 247 532-803 1-255 (257)
167 cd05055 PTKc_PDGFR Catalytic d 100.0 4.4E-35 9.6E-40 319.8 18.3 257 526-803 35-301 (302)
168 cd05066 PTKc_EphR_A Catalytic 100.0 4E-35 8.7E-40 313.9 17.6 254 527-803 5-266 (267)
169 cd06654 STKc_PAK1 Catalytic do 100.0 7.4E-35 1.6E-39 317.1 19.9 249 527-799 21-270 (296)
170 cd07853 STKc_NLK Catalytic dom 100.0 3.3E-35 7.1E-40 330.5 17.7 260 530-799 4-288 (372)
171 cd05039 PTKc_Csk_like Catalyti 100.0 5.7E-35 1.2E-39 310.4 18.5 248 527-802 7-255 (256)
172 KOG0033 Ca2+/calmodulin-depend 100.0 1E-36 2.2E-41 299.2 4.3 250 527-799 12-267 (355)
173 cd05040 PTKc_Ack_like Catalyti 100.0 6.4E-35 1.4E-39 310.0 18.6 248 532-801 1-256 (257)
174 cd05598 STKc_LATS Catalytic do 100.0 1.2E-35 2.6E-40 334.5 13.6 249 529-799 4-301 (376)
175 cd00192 PTKc Catalytic domain 100.0 9.1E-35 2E-39 308.6 19.5 250 532-801 1-262 (262)
176 cd05622 STKc_ROCK1 Catalytic d 100.0 3.2E-35 6.8E-40 330.1 16.7 253 526-800 43-305 (371)
177 cd05056 PTKc_FAK Catalytic dom 100.0 6.5E-35 1.4E-39 312.7 18.2 256 526-805 6-267 (270)
178 cd05602 STKc_SGK1 Catalytic do 100.0 2.2E-35 4.8E-40 325.6 15.0 240 532-797 1-245 (325)
179 PF00069 Pkinase: Protein kina 100.0 4.5E-35 9.7E-40 311.3 16.7 252 529-799 2-257 (260)
180 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-35 4.5E-40 325.2 14.5 237 532-794 1-242 (321)
181 cd05061 PTKc_InsR Catalytic do 100.0 6.6E-35 1.4E-39 316.0 18.1 260 525-804 5-279 (288)
182 cd05099 PTKc_FGFR4 Catalytic d 100.0 8.9E-35 1.9E-39 319.1 19.3 261 525-805 11-295 (314)
183 cd05109 PTKc_HER2 Catalytic do 100.0 7.2E-35 1.6E-39 314.0 18.2 254 527-804 8-269 (279)
184 cd06619 PKc_MKK5 Catalytic dom 100.0 2.7E-34 5.8E-39 309.8 22.5 248 529-799 4-253 (279)
185 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-34 2.8E-39 310.2 20.0 254 532-801 1-268 (269)
186 cd05604 STKc_SGK3 Catalytic do 100.0 1.9E-35 4E-40 326.2 13.8 238 532-795 1-243 (325)
187 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.4E-34 3E-39 311.4 20.0 247 527-799 5-253 (277)
188 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-34 3.5E-39 305.9 20.1 247 532-801 1-250 (251)
189 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.6E-35 1.2E-39 315.8 16.8 264 525-803 3-283 (284)
190 KOG4279 Serine/threonine prote 100.0 1.1E-35 2.3E-40 326.3 11.0 247 533-799 582-832 (1226)
191 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.6E-34 3.4E-39 308.7 19.3 239 532-800 1-261 (262)
192 PRK13184 pknD serine/threonine 100.0 1.8E-34 3.9E-39 343.8 21.8 260 528-805 4-292 (932)
193 cd06643 STKc_SLK Catalytic dom 100.0 3.5E-34 7.6E-39 309.1 22.2 250 528-799 7-262 (282)
194 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-34 2.8E-39 311.5 18.6 239 533-801 2-274 (274)
195 cd05050 PTKc_Musk Catalytic do 100.0 6.8E-35 1.5E-39 315.7 16.3 256 527-802 6-288 (288)
196 cd05615 STKc_cPKC_alpha Cataly 100.0 6.3E-35 1.4E-39 321.7 16.1 239 529-793 3-246 (323)
197 KOG0599 Phosphorylase kinase g 100.0 1.5E-35 3.3E-40 294.9 9.9 246 531-799 22-283 (411)
198 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-34 2.8E-39 307.8 17.9 247 527-802 7-255 (256)
199 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9E-35 2E-39 318.3 17.1 264 528-799 8-286 (309)
200 cd06640 STKc_MST4 Catalytic do 100.0 6.5E-34 1.4E-38 306.3 23.5 247 527-799 5-253 (277)
201 KOG0199 ACK and related non-re 100.0 3.5E-35 7.7E-40 323.4 13.5 250 529-801 113-370 (1039)
202 PHA03211 serine/threonine kina 100.0 3.8E-34 8.3E-39 327.4 22.6 259 528-799 171-455 (461)
203 cd06637 STKc_TNIK Catalytic do 100.0 2.8E-34 6E-39 307.9 20.2 250 527-799 7-269 (272)
204 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.8E-34 1.5E-38 304.7 23.1 254 532-801 1-267 (268)
205 cd06656 STKc_PAK3 Catalytic do 100.0 2.9E-34 6.3E-39 312.6 20.5 250 526-799 19-269 (297)
206 cd05058 PTKc_Met_Ron Catalytic 100.0 2.3E-34 4.9E-39 306.8 19.3 250 532-804 1-260 (262)
207 cd06612 STKc_MST1_2 Catalytic 100.0 3.2E-34 7E-39 304.1 20.2 249 527-799 4-253 (256)
208 cd06645 STKc_MAP4K3 Catalytic 100.0 3.8E-34 8.3E-39 306.0 20.9 252 527-799 10-265 (267)
209 cd05632 STKc_GRK5 Catalytic do 100.0 1.9E-34 4.1E-39 312.0 18.7 249 530-799 4-261 (285)
210 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-34 3.2E-39 312.9 17.8 263 529-799 3-285 (288)
211 KOG1025 Epidermal growth facto 100.0 1.1E-35 2.4E-40 332.5 9.2 253 528-804 698-958 (1177)
212 cd05630 STKc_GRK6 Catalytic do 100.0 1.7E-34 3.8E-39 312.4 18.2 249 530-799 4-261 (285)
213 cd05044 PTKc_c-ros Catalytic d 100.0 1.5E-34 3.2E-39 309.4 17.4 251 532-802 1-269 (269)
214 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.6E-34 9.9E-39 308.7 21.4 259 525-801 4-268 (284)
215 cd07868 STKc_CDK8 Catalytic do 100.0 3.7E-34 7.9E-39 314.5 20.8 197 531-733 6-219 (317)
216 cd08528 STKc_Nek10 Catalytic d 100.0 2.9E-34 6.2E-39 307.4 19.4 253 529-801 3-268 (269)
217 KOG4717 Serine/threonine prote 100.0 1.1E-34 2.3E-39 309.6 15.8 247 527-799 19-270 (864)
218 cd05042 PTKc_Aatyk Catalytic d 100.0 2.6E-34 5.7E-39 307.8 19.0 254 532-801 1-268 (269)
219 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2E-34 4.2E-39 310.8 18.0 262 527-803 5-283 (284)
220 cd05597 STKc_DMPK_like Catalyt 100.0 3.7E-34 8.1E-39 316.6 20.3 253 528-799 3-266 (331)
221 cd06609 STKc_MST3_like Catalyt 100.0 4.6E-34 9.9E-39 306.8 20.4 247 528-799 3-251 (274)
222 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.7E-34 5.8E-39 307.1 18.4 247 529-799 3-264 (267)
223 cd06624 STKc_ASK Catalytic dom 100.0 5.5E-34 1.2E-38 305.1 20.8 246 532-799 14-265 (268)
224 cd06644 STKc_STK10_LOK Catalyt 100.0 1.6E-33 3.4E-38 305.7 24.3 251 527-799 13-269 (292)
225 cd08227 PK_STRAD_alpha Pseudok 100.0 3.5E-34 7.6E-39 316.3 19.3 257 530-799 2-307 (327)
226 cd05627 STKc_NDR2 Catalytic do 100.0 8.3E-35 1.8E-39 325.7 14.5 248 530-799 5-293 (360)
227 cd06615 PKc_MEK Catalytic doma 100.0 5.5E-34 1.2E-38 312.0 20.6 259 529-800 4-288 (308)
228 PHA03207 serine/threonine kina 100.0 5.4E-34 1.2E-38 322.7 21.1 262 524-799 90-375 (392)
229 PHA03209 serine/threonine kina 100.0 5E-34 1.1E-38 318.9 20.3 189 527-730 67-256 (357)
230 cd06631 STKc_YSK4 Catalytic do 100.0 5.1E-34 1.1E-38 304.7 19.5 249 529-799 3-262 (265)
231 cd05046 PTK_CCK4 Pseudokinase 100.0 3.1E-34 6.8E-39 308.1 17.9 254 529-801 8-274 (275)
232 cd07876 STKc_JNK2 Catalytic do 100.0 4.5E-34 9.7E-39 319.7 19.9 262 527-800 22-316 (359)
233 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.3E-34 9.2E-39 303.8 18.5 238 532-801 1-259 (259)
234 cd05110 PTKc_HER4 Catalytic do 100.0 3.5E-34 7.6E-39 312.8 18.0 253 530-806 11-271 (303)
235 cd08217 STKc_Nek2 Catalytic do 100.0 4.4E-34 9.5E-39 304.2 18.3 253 529-799 3-262 (265)
236 cd06655 STKc_PAK2 Catalytic do 100.0 4.3E-34 9.4E-39 311.0 18.5 247 529-799 22-269 (296)
237 cd07833 STKc_CDKL Catalytic do 100.0 3.1E-34 6.8E-39 310.0 17.3 265 528-799 3-285 (288)
238 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.6E-34 3.5E-39 307.6 14.8 240 532-801 1-258 (258)
239 cd07867 STKc_CDC2L6 Catalytic 100.0 9.5E-34 2.1E-38 311.0 21.2 197 531-733 6-219 (317)
240 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-33 2.8E-38 305.1 21.9 253 528-800 20-284 (286)
241 cd05624 STKc_MRCK_beta Catalyt 100.0 1.9E-34 4.1E-39 319.0 15.7 253 528-799 3-266 (331)
242 cd08223 STKc_Nek4 Catalytic do 100.0 9.6E-34 2.1E-38 300.9 20.4 249 528-799 2-254 (257)
243 cd06611 STKc_SLK_like Catalyti 100.0 8.8E-34 1.9E-38 305.6 20.3 251 527-799 6-262 (280)
244 KOG0610 Putative serine/threon 100.0 6.6E-34 1.4E-38 299.5 18.5 250 529-799 80-392 (459)
245 cd07861 STKc_CDK1_euk Catalyti 100.0 5.1E-34 1.1E-38 308.0 18.3 264 529-799 3-282 (285)
246 cd05623 STKc_MRCK_alpha Cataly 100.0 2.8E-34 6.1E-39 317.8 16.6 252 529-799 4-266 (332)
247 cd08219 STKc_Nek3 Catalytic do 100.0 5.3E-34 1.1E-38 302.8 17.9 248 529-799 3-252 (255)
248 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-33 2.8E-38 304.9 21.0 264 528-799 3-283 (286)
249 cd07875 STKc_JNK1 Catalytic do 100.0 3.6E-34 7.8E-39 321.1 17.3 261 527-799 25-318 (364)
250 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.3E-34 9.4E-39 311.6 17.4 263 528-799 8-286 (301)
251 cd07874 STKc_JNK3 Catalytic do 100.0 4.9E-34 1.1E-38 318.8 18.3 261 527-799 18-311 (355)
252 smart00219 TyrKc Tyrosine kina 100.0 7.8E-34 1.7E-38 301.2 18.5 249 530-800 3-258 (258)
253 cd06613 STKc_MAP4K3_like Catal 100.0 1.1E-33 2.5E-38 301.0 19.7 252 528-799 5-260 (262)
254 cd08221 STKc_Nek9 Catalytic do 100.0 1.1E-33 2.4E-38 300.4 19.3 249 529-800 3-254 (256)
255 cd05057 PTKc_EGFR_like Catalyt 100.0 8.2E-34 1.8E-38 305.8 18.5 256 526-805 7-270 (279)
256 cd07832 STKc_CCRK Catalytic do 100.0 8.1E-34 1.8E-38 306.4 18.4 261 528-799 2-282 (286)
257 cd06658 STKc_PAK5 Catalytic do 100.0 4.5E-34 9.9E-39 310.2 16.4 245 531-799 27-272 (292)
258 PTZ00266 NIMA-related protein 100.0 7.1E-34 1.5E-38 339.8 19.3 255 526-799 13-295 (1021)
259 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-33 2.5E-38 302.4 19.0 246 530-799 6-261 (266)
260 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.2E-34 9.1E-39 308.8 15.7 263 529-799 4-283 (286)
261 cd05586 STKc_Sck1_like Catalyt 100.0 1.9E-34 4.1E-39 318.8 13.2 241 534-799 1-253 (330)
262 PTZ00284 protein kinase; Provi 100.0 5.5E-34 1.2E-38 330.0 17.4 261 527-799 130-438 (467)
263 cd06641 STKc_MST3 Catalytic do 100.0 2.6E-33 5.7E-38 301.6 21.4 247 527-799 5-253 (277)
264 cd05083 PTKc_Chk Catalytic dom 100.0 9E-34 2E-38 301.0 17.3 246 527-802 7-253 (254)
265 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.9E-33 4E-38 304.0 20.0 252 528-799 3-262 (286)
266 cd06632 STKc_MEKK1_plant Catal 100.0 9.2E-34 2E-38 300.9 17.2 245 530-799 4-255 (258)
267 cd06659 STKc_PAK6 Catalytic do 100.0 1.3E-33 2.7E-38 307.6 18.6 245 531-799 26-271 (297)
268 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.7E-33 3.6E-38 313.0 19.9 259 527-799 16-298 (343)
269 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.6E-33 9.9E-38 298.6 22.4 252 529-799 4-269 (272)
270 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-33 3.2E-38 299.4 18.0 249 528-799 2-253 (256)
271 cd06639 STKc_myosinIIIB Cataly 100.0 2.5E-33 5.3E-38 304.0 20.0 252 528-799 24-287 (291)
272 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-33 4E-38 299.8 18.5 251 528-799 2-261 (264)
273 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-33 3.1E-38 302.5 17.4 254 530-803 3-272 (273)
274 cd06652 STKc_MEKK2 Catalytic d 100.0 2.4E-33 5.3E-38 299.6 19.0 247 529-799 5-261 (265)
275 cd07841 STKc_CDK7 Catalytic do 100.0 3.8E-33 8.3E-38 303.5 20.9 263 529-799 3-282 (298)
276 cd07839 STKc_CDK5 Catalytic do 100.0 1.5E-33 3.2E-38 304.4 17.4 263 529-799 3-281 (284)
277 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-32 2.4E-37 298.4 24.1 257 530-799 5-266 (287)
278 cd06608 STKc_myosinIII_like Ca 100.0 2.2E-33 4.7E-38 300.8 18.3 253 527-799 7-272 (275)
279 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.6E-33 9.9E-38 297.1 20.7 255 528-799 3-264 (267)
280 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.8E-33 3.8E-38 303.4 17.6 251 529-799 4-261 (283)
281 cd06605 PKc_MAPKK Catalytic do 100.0 3.9E-33 8.5E-38 297.6 19.9 251 529-799 4-257 (265)
282 KOG0577 Serine/threonine prote 100.0 3.1E-34 6.8E-39 310.5 11.2 240 532-799 32-278 (948)
283 cd07843 STKc_CDC2L1 Catalytic 100.0 5E-33 1.1E-37 301.8 20.8 265 527-799 6-290 (293)
284 cd06630 STKc_MEKK1 Catalytic d 100.0 4.1E-33 8.9E-38 298.0 19.7 250 530-799 4-264 (268)
285 cd06647 STKc_PAK_I Catalytic d 100.0 4.6E-33 1E-37 302.5 20.1 249 527-799 20-269 (293)
286 cd06917 STKc_NAK1_like Catalyt 100.0 6.3E-33 1.4E-37 298.3 21.0 247 528-799 3-255 (277)
287 cd05574 STKc_phototropin_like 100.0 2.9E-33 6.4E-38 307.2 18.7 250 529-799 4-289 (316)
288 cd08220 STKc_Nek8 Catalytic do 100.0 4.5E-33 9.7E-38 295.4 19.3 247 529-799 3-253 (256)
289 cd07860 STKc_CDK2_3 Catalytic 100.0 1.7E-33 3.6E-38 304.0 16.2 262 530-799 4-281 (284)
290 KOG0667 Dual-specificity tyros 100.0 1.8E-33 3.9E-38 313.6 16.7 262 527-799 187-502 (586)
291 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.1E-33 1.3E-37 299.4 20.1 250 527-799 17-279 (282)
292 cd07844 STKc_PCTAIRE_like Cata 100.0 4.1E-33 8.8E-38 302.2 18.7 261 528-799 7-288 (291)
293 cd06648 STKc_PAK_II Catalytic 100.0 9.3E-33 2E-37 298.8 20.8 245 531-799 24-269 (285)
294 cd05609 STKc_MAST Catalytic do 100.0 8.1E-33 1.8E-37 302.3 20.4 252 529-802 4-273 (305)
295 cd06607 STKc_TAO Catalytic dom 100.0 9.7E-33 2.1E-37 301.9 21.0 245 527-799 16-267 (307)
296 cd07835 STKc_CDK1_like Catalyt 100.0 3.9E-33 8.5E-38 300.9 17.6 262 530-799 3-280 (283)
297 cd05580 STKc_PKA Catalytic dom 100.0 3.9E-33 8.6E-38 302.4 17.6 243 528-799 3-254 (290)
298 KOG0584 Serine/threonine prote 100.0 5.8E-34 1.3E-38 314.3 11.0 246 529-799 43-296 (632)
299 cd07842 STKc_CDK8_like Catalyt 100.0 4.4E-33 9.5E-38 305.4 17.7 267 529-799 3-313 (316)
300 cd07840 STKc_CDK9_like Catalyt 100.0 5.5E-33 1.2E-37 299.7 18.0 262 530-799 3-284 (287)
301 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-32 2.5E-37 293.5 20.2 249 529-799 4-256 (264)
302 cd05122 PKc_STE Catalytic doma 100.0 9.5E-33 2.1E-37 291.0 19.2 247 530-799 4-251 (253)
303 cd07836 STKc_Pho85 Catalytic d 100.0 7.6E-33 1.7E-37 298.7 18.6 264 529-799 3-281 (284)
304 cd06635 STKc_TAO1 Catalytic do 100.0 2.2E-32 4.7E-37 300.7 22.3 247 527-801 26-279 (317)
305 PHA03210 serine/threonine kina 100.0 5.3E-33 1.1E-37 323.5 18.3 271 525-799 147-454 (501)
306 KOG0574 STE20-like serine/thre 100.0 2.4E-34 5.2E-39 289.3 5.4 248 528-799 35-283 (502)
307 cd06614 STKc_PAK Catalytic dom 100.0 1.6E-32 3.5E-37 296.8 20.1 249 528-799 21-270 (286)
308 cd08530 STKc_CNK2-like Catalyt 100.0 6.3E-33 1.4E-37 294.1 16.4 248 529-799 3-253 (256)
309 cd07837 STKc_CdkB_plant Cataly 100.0 2.3E-32 4.9E-37 296.8 21.1 265 529-799 4-291 (295)
310 cd05633 STKc_GRK3 Catalytic do 100.0 1.2E-32 2.7E-37 296.9 18.9 242 533-799 1-255 (279)
311 cd06616 PKc_MKK4 Catalytic dom 100.0 1.6E-32 3.5E-37 297.0 19.7 253 530-799 8-267 (288)
312 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3E-32 6.5E-37 295.5 21.8 261 528-799 7-288 (291)
313 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-32 3.5E-37 295.4 19.4 244 534-798 1-253 (277)
314 cd08226 PK_STRAD_beta Pseudoki 100.0 2.1E-32 4.5E-37 302.3 20.6 260 532-799 4-308 (328)
315 cd05572 STKc_cGK_PKG Catalytic 100.0 1.4E-32 3E-37 293.1 18.4 242 534-798 1-251 (262)
316 cd07831 STKc_MOK Catalytic dom 100.0 1.5E-32 3.2E-37 295.9 18.6 256 530-799 3-279 (282)
317 KOG0579 Ste20-like serine/thre 100.0 1.6E-33 3.4E-38 306.4 10.9 251 527-799 33-289 (1187)
318 cd08215 STKc_Nek Catalytic dom 100.0 1.3E-32 2.9E-37 291.3 17.9 250 529-799 3-255 (258)
319 cd08225 STKc_Nek5 Catalytic do 100.0 1.6E-32 3.5E-37 291.3 18.4 248 529-799 3-254 (257)
320 cd07850 STKc_JNK Catalytic dom 100.0 1.3E-32 2.8E-37 307.1 17.8 261 527-799 17-311 (353)
321 cd06657 STKc_PAK4 Catalytic do 100.0 2.2E-32 4.7E-37 297.1 18.4 244 532-799 26-270 (292)
322 cd05578 STKc_Yank1 Catalytic d 100.0 1.3E-32 2.9E-37 292.6 16.2 246 529-798 3-254 (258)
323 cd06606 STKc_MAPKKK Catalytic 100.0 3.6E-32 7.9E-37 287.8 19.5 248 530-799 4-257 (260)
324 PTZ00024 cyclin-dependent prot 100.0 2.4E-32 5.1E-37 302.7 18.8 261 529-799 12-313 (335)
325 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-32 2.5E-37 293.3 15.6 245 534-801 1-256 (265)
326 PLN00009 cyclin-dependent kina 100.0 2.5E-32 5.4E-37 296.6 18.0 264 528-799 4-284 (294)
327 cd07845 STKc_CDK10 Catalytic d 100.0 5E-32 1.1E-36 296.5 20.4 264 528-799 9-290 (309)
328 KOG0596 Dual specificity; seri 100.0 8.9E-33 1.9E-37 299.1 14.1 252 525-799 360-627 (677)
329 cd07864 STKc_CDK12 Catalytic d 100.0 4.7E-32 1E-36 295.4 19.7 265 526-799 7-299 (302)
330 cd05613 STKc_MSK1_N N-terminal 100.0 4.1E-32 8.8E-37 294.3 19.0 250 529-799 3-268 (290)
331 cd06627 STKc_Cdc7_like Catalyt 100.0 9.9E-32 2.1E-36 284.4 21.3 246 529-799 3-251 (254)
332 cd05611 STKc_Rim15_like Cataly 100.0 4.6E-32 9.9E-37 288.8 18.8 244 532-801 2-250 (260)
333 cd07849 STKc_ERK1_2_like Catal 100.0 8.4E-33 1.8E-37 306.5 13.3 259 528-799 7-292 (336)
334 cd07852 STKc_MAPK15 Catalytic 100.0 7.6E-32 1.6E-36 298.9 20.9 265 526-799 7-295 (337)
335 KOG0586 Serine/threonine prote 100.0 1.5E-32 3.2E-37 303.1 14.7 245 528-799 58-306 (596)
336 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.8E-32 1.3E-36 288.9 18.4 248 528-799 4-261 (264)
337 cd07865 STKc_CDK9 Catalytic do 100.0 4.8E-32 1E-36 296.1 18.2 261 528-799 14-307 (310)
338 cd05118 STKc_CMGC Catalytic do 100.0 8.3E-32 1.8E-36 290.1 19.6 261 530-799 3-280 (283)
339 KOG0986 G protein-coupled rece 100.0 5.8E-33 1.3E-37 293.9 10.2 248 531-799 190-446 (591)
340 cd05583 STKc_MSK_N N-terminal 100.0 5E-32 1.1E-36 293.3 17.9 254 529-803 3-267 (288)
341 cd05606 STKc_beta_ARK Catalyti 100.0 7.9E-32 1.7E-36 290.4 19.3 242 533-799 1-255 (278)
342 cd06634 STKc_TAO2 Catalytic do 100.0 8E-32 1.7E-36 294.9 19.1 249 525-801 14-269 (308)
343 cd07830 STKc_MAK_like Catalyti 100.0 8.7E-32 1.9E-36 290.2 19.1 262 530-799 3-280 (283)
344 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-31 2.5E-36 289.6 19.8 262 530-799 3-284 (287)
345 PHA02882 putative serine/threo 100.0 6.2E-32 1.3E-36 293.8 17.7 256 525-800 11-293 (294)
346 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-31 2.6E-36 294.0 20.1 261 530-799 6-295 (314)
347 cd07834 STKc_MAPK Catalytic do 100.0 2.2E-32 4.8E-37 302.1 14.2 267 528-802 2-294 (330)
348 KOG0200 Fibroblast/platelet-de 100.0 3.9E-32 8.4E-37 321.3 17.1 264 523-805 293-581 (609)
349 KOG4250 TANK binding protein k 100.0 3.3E-32 7.1E-37 303.9 15.3 268 531-805 18-312 (732)
350 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.5E-32 5.3E-37 302.9 14.2 265 528-802 7-296 (337)
351 cd08222 STKc_Nek11 Catalytic d 100.0 3.1E-32 6.8E-37 290.0 14.4 250 528-799 2-257 (260)
352 cd07855 STKc_ERK5 Catalytic do 100.0 4.1E-32 9E-37 300.7 15.7 264 528-799 7-294 (334)
353 cd06633 STKc_TAO3 Catalytic do 100.0 2.5E-31 5.3E-36 291.8 21.4 242 530-799 25-273 (313)
354 PHA03390 pk1 serine/threonine- 100.0 4.3E-31 9.2E-36 283.1 22.0 235 534-799 24-262 (267)
355 cd06618 PKc_MKK7 Catalytic dom 100.0 2.4E-31 5.2E-36 289.3 20.1 250 528-799 17-273 (296)
356 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-31 2.3E-36 289.1 16.3 261 530-799 3-279 (282)
357 KOG4645 MAPKKK (MAP kinase kin 100.0 4.1E-33 8.8E-38 326.6 5.3 245 531-799 1240-1494(1509)
358 cd05581 STKc_PDK1 Catalytic do 100.0 6.2E-32 1.3E-36 290.5 14.0 247 528-799 3-277 (280)
359 cd07866 STKc_BUR1 Catalytic do 100.0 9.4E-32 2E-36 294.0 15.5 264 528-799 10-308 (311)
360 KOG0607 MAP kinase-interacting 100.0 8.5E-32 1.8E-36 273.6 13.8 252 531-799 83-361 (463)
361 KOG0690 Serine/threonine prote 100.0 3.3E-32 7.2E-37 276.7 10.6 252 517-799 164-424 (516)
362 cd07879 STKc_p38delta_MAPK13 C 100.0 8.2E-31 1.8E-35 291.3 21.2 261 529-804 18-304 (342)
363 KOG0666 Cyclin C-dependent kin 100.0 4.3E-32 9.4E-37 275.0 9.5 203 527-733 25-243 (438)
364 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.5E-31 7.5E-36 294.3 17.4 263 528-799 7-300 (342)
365 cd05123 STKc_AGC Catalytic dom 100.0 5.3E-31 1.2E-35 278.4 18.0 236 534-795 1-240 (250)
366 KOG0983 Mitogen-activated prot 100.0 2.1E-31 4.6E-36 265.7 13.7 247 531-799 97-349 (391)
367 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.6E-31 2.1E-35 290.9 19.8 258 528-799 17-298 (343)
368 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.3E-31 2E-35 289.1 19.5 259 528-799 12-288 (328)
369 cd07857 STKc_MPK1 Catalytic do 100.0 4.3E-31 9.3E-36 292.3 16.5 262 529-799 3-292 (332)
370 KOG4236 Serine/threonine prote 100.0 1.8E-31 3.8E-36 285.8 10.9 253 523-799 560-819 (888)
371 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.9E-30 4.1E-35 288.7 19.2 258 528-799 19-300 (345)
372 cd07851 STKc_p38 Catalytic dom 100.0 9.6E-31 2.1E-35 290.9 15.9 259 528-799 17-298 (343)
373 KOG1024 Receptor-like protein 100.0 2.6E-31 5.6E-36 276.4 10.0 259 526-804 284-556 (563)
374 cd05576 STKc_RPK118_like Catal 100.0 2E-30 4.3E-35 272.8 16.9 220 537-794 4-224 (237)
375 KOG1035 eIF-2alpha kinase GCN2 100.0 8.2E-31 1.8E-35 306.2 15.1 246 532-799 485-871 (1351)
376 cd05610 STKc_MASTL Catalytic d 100.0 2.6E-30 5.7E-35 310.2 19.4 143 528-677 6-152 (669)
377 KOG1006 Mitogen-activated prot 100.0 6.9E-32 1.5E-36 268.4 3.8 264 515-799 58-327 (361)
378 KOG0696 Serine/threonine prote 100.0 3.6E-31 7.9E-36 276.3 8.2 242 524-791 347-593 (683)
379 KOG0603 Ribosomal protein S6 k 100.0 1.7E-30 3.7E-35 288.4 12.9 238 527-799 323-563 (612)
380 KOG0604 MAP kinase-activated p 100.0 1.9E-30 4E-35 262.2 12.0 243 531-799 67-322 (400)
381 KOG0669 Cyclin T-dependent kin 100.0 6.7E-32 1.5E-36 266.2 1.6 262 530-799 21-315 (376)
382 KOG0662 Cyclin-dependent kinas 100.0 3.6E-30 7.8E-35 242.0 12.9 258 531-799 7-283 (292)
383 KOG0587 Traf2- and Nck-interac 100.0 5.6E-30 1.2E-34 290.9 17.0 250 528-799 21-282 (953)
384 KOG0612 Rho-associated, coiled 100.0 6.5E-31 1.4E-35 304.6 9.2 252 526-799 75-338 (1317)
385 KOG1151 Tousled-like protein k 100.0 3E-30 6.5E-35 271.3 11.6 260 523-799 460-741 (775)
386 smart00220 S_TKc Serine/Threon 100.0 1.7E-29 3.6E-34 264.2 16.7 239 538-799 1-241 (244)
387 PLN03225 Serine/threonine-prot 100.0 2.6E-29 5.6E-34 294.5 17.1 259 528-799 134-450 (566)
388 PLN03224 probable serine/threo 100.0 6.2E-29 1.3E-33 284.3 18.3 259 528-799 147-500 (507)
389 KOG0984 Mitogen-activated prot 100.0 1.5E-29 3.2E-34 243.4 10.8 199 531-734 51-256 (282)
390 KOG0671 LAMMER dual specificit 100.0 5.1E-30 1.1E-34 267.9 6.1 272 517-799 80-406 (415)
391 KOG0614 cGMP-dependent protein 100.0 1.1E-29 2.3E-34 271.8 7.6 244 531-799 425-677 (732)
392 KOG1027 Serine/threonine prote 100.0 1.7E-29 3.6E-34 285.8 8.6 244 531-799 514-767 (903)
393 KOG0664 Nemo-like MAPK-related 100.0 4.2E-30 9E-35 255.9 1.0 264 531-802 58-346 (449)
394 KOG0608 Warts/lats-like serine 100.0 3.8E-28 8.3E-33 265.2 15.1 208 532-747 635-888 (1034)
395 KOG0695 Serine/threonine prote 100.0 2.3E-28 5E-33 249.3 11.9 244 530-791 254-502 (593)
396 KOG1290 Serine/threonine prote 100.0 1.1E-27 2.4E-32 256.3 16.1 277 513-799 64-550 (590)
397 cd00180 PKc Catalytic domain o 99.9 1.9E-26 4.2E-31 234.8 21.0 211 534-800 1-215 (215)
398 KOG0668 Casein kinase II, alph 99.9 1.3E-26 2.9E-31 226.0 12.8 256 527-799 39-322 (338)
399 KOG0665 Jun-N-terminal kinase 99.9 8.1E-27 1.8E-31 238.6 9.4 249 532-799 23-310 (369)
400 smart00221 STYKc Protein kinas 99.9 1.4E-25 3E-30 232.4 17.0 196 530-732 3-202 (225)
401 KOG0670 U4/U6-associated splic 99.9 4.8E-27 1E-31 252.2 5.4 278 512-799 418-746 (752)
402 KOG1152 Signal transduction se 99.9 2E-26 4.3E-31 250.6 10.0 193 529-731 564-770 (772)
403 KOG0576 Mitogen-activated prot 99.9 2.5E-26 5.5E-31 253.7 4.8 251 528-799 17-271 (829)
404 PLN00181 protein SPA1-RELATED; 99.9 3.6E-25 7.8E-30 272.1 7.2 196 578-799 28-265 (793)
405 KOG1345 Serine/threonine kinas 99.9 5.5E-24 1.2E-28 212.7 13.9 253 527-802 25-287 (378)
406 smart00750 KIND kinase non-cat 99.9 1.7E-23 3.6E-28 209.3 14.6 168 607-804 1-170 (176)
407 KOG1167 Serine/threonine prote 99.9 1.2E-23 2.5E-28 223.5 10.0 257 529-799 39-381 (418)
408 PRK09188 serine/threonine prot 99.9 9.1E-22 2E-26 216.4 14.0 160 528-705 20-195 (365)
409 KOG1164 Casein kinase (serine/ 99.9 6.6E-21 1.4E-25 209.7 20.3 261 527-806 19-300 (322)
410 KOG0195 Integrin-linked kinase 99.9 1.6E-22 3.6E-27 201.8 6.7 248 529-804 193-447 (448)
411 COG0515 SPS1 Serine/threonine 99.8 6.2E-20 1.3E-24 199.3 21.6 260 529-799 3-275 (384)
412 cd05147 RIO1_euk RIO kinase fa 99.8 1.2E-19 2.5E-24 183.7 12.0 139 531-679 2-167 (190)
413 KOG0590 Checkpoint kinase and 99.8 2.1E-20 4.5E-25 218.8 6.0 253 530-799 322-585 (601)
414 KOG1165 Casein kinase (serine/ 99.8 1.9E-19 4.2E-24 185.1 12.2 199 527-734 29-240 (449)
415 KOG1163 Casein kinase (serine/ 99.8 2.1E-19 4.6E-24 177.3 11.9 260 525-803 14-284 (341)
416 PRK10359 lipopolysaccharide co 99.8 1.2E-19 2.7E-24 185.9 9.3 174 521-724 26-216 (232)
417 KOG1023 Natriuretic peptide re 99.8 4.8E-19 1E-23 198.1 12.6 216 576-804 1-225 (484)
418 cd05145 RIO1_like RIO kinase f 99.8 1.3E-18 2.8E-23 176.5 14.3 140 531-680 2-168 (190)
419 KOG1240 Protein kinase contain 99.8 9.2E-20 2E-24 211.8 5.5 249 529-803 26-295 (1431)
420 PRK12274 serine/threonine prot 99.8 7.4E-18 1.6E-22 169.1 13.8 185 531-734 7-211 (218)
421 KOG0603 Ribosomal protein S6 k 99.7 1.1E-18 2.3E-23 194.8 3.5 186 533-732 1-193 (612)
422 PRK10345 hypothetical protein; 99.7 4.3E-17 9.3E-22 166.6 13.5 134 531-676 7-156 (210)
423 PF14531 Kinase-like: Kinase-l 99.7 7E-17 1.5E-21 170.5 15.1 230 531-790 17-288 (288)
424 KOG1166 Mitotic checkpoint ser 99.7 1.5E-16 3.3E-21 189.6 18.1 253 523-808 695-958 (974)
425 smart00090 RIO RIO-like kinase 99.7 2.7E-16 5.9E-21 164.6 13.6 140 528-679 30-198 (237)
426 PRK14879 serine/threonine prot 99.7 4E-16 8.7E-21 160.9 13.8 134 532-678 2-143 (211)
427 TIGR03724 arch_bud32 Kae1-asso 99.7 6.9E-16 1.5E-20 157.6 13.0 130 533-678 1-138 (199)
428 cd05144 RIO2_C RIO kinase fami 99.6 9.6E-16 2.1E-20 156.6 13.3 135 528-679 17-175 (198)
429 KOG0617 Ras suppressor protein 99.6 8.6E-18 1.9E-22 157.9 -4.2 177 263-448 31-213 (264)
430 KOG4158 BRPK/PTEN-induced prot 99.6 2.2E-15 4.8E-20 158.5 13.0 197 580-801 274-512 (598)
431 KOG1033 eIF-2alpha kinase PEK/ 99.6 8E-17 1.7E-21 176.7 1.6 176 595-797 329-510 (516)
432 PRK09605 bifunctional UGMP fam 99.6 2.3E-15 5E-20 177.0 14.0 132 530-678 337-476 (535)
433 KOG0606 Microtubule-associated 99.6 1.7E-15 3.8E-20 176.8 5.9 202 531-791 88-304 (1205)
434 PLN03150 hypothetical protein; 99.6 2.4E-13 5.1E-18 161.8 23.6 91 339-429 440-532 (623)
435 cd05119 RIO RIO kinase family, 99.6 2.5E-14 5.4E-19 144.6 12.5 135 531-679 2-164 (187)
436 PLN00113 leucine-rich repeat r 99.6 3.6E-15 7.8E-20 188.5 7.7 109 340-448 474-585 (968)
437 cd05120 APH_ChoK_like Aminogly 99.5 4E-14 8.6E-19 136.6 12.7 134 531-678 3-138 (155)
438 PRK01723 3-deoxy-D-manno-octul 99.5 2E-13 4.4E-18 143.2 13.7 135 531-678 36-191 (239)
439 KOG0444 Cytoskeletal regulator 99.5 2.2E-15 4.9E-20 165.6 -1.1 188 261-451 146-379 (1255)
440 KOG4194 Membrane glycoprotein 99.4 3.1E-14 6.8E-19 156.2 2.6 182 263-446 195-404 (873)
441 KOG0590 Checkpoint kinase and 99.4 1.6E-14 3.4E-19 169.5 -0.8 252 530-799 24-286 (601)
442 KOG1266 Protein kinase [Signal 99.4 2.4E-13 5.1E-18 140.5 7.2 203 575-799 120-331 (458)
443 KOG4194 Membrane glycoprotein 99.4 1.5E-13 3.2E-18 151.0 2.6 199 223-447 150-354 (873)
444 TIGR01982 UbiB 2-polyprenylphe 99.4 2.2E-12 4.8E-17 147.0 11.6 139 532-680 123-308 (437)
445 KOG0444 Cytoskeletal regulator 99.3 1.8E-13 3.9E-18 150.8 -0.8 156 263-425 30-186 (1255)
446 KOG0472 Leucine-rich repeat pr 99.3 1.4E-13 3.1E-18 145.3 -2.5 163 268-447 140-310 (565)
447 cd05151 ChoK Choline Kinase (C 99.2 5.5E-11 1.2E-15 117.9 10.8 129 532-677 4-135 (170)
448 KOG0617 Ras suppressor protein 99.2 8.5E-13 1.8E-17 124.5 -3.5 153 283-447 28-186 (264)
449 KOG0618 Serine/threonine phosp 99.2 3.9E-12 8.5E-17 147.1 0.3 105 340-447 382-489 (1081)
450 PRK04750 ubiB putative ubiquin 99.2 9.8E-11 2.1E-15 135.1 11.2 139 532-680 125-315 (537)
451 KOG0472 Leucine-rich repeat pr 99.2 5.8E-13 1.2E-17 140.8 -6.7 175 263-445 66-263 (565)
452 KOG0601 Cyclin-dependent kinas 99.2 4E-11 8.8E-16 134.8 7.2 253 522-799 110-379 (524)
453 KOG1243 Protein kinase [Genera 99.1 5.8E-10 1.2E-14 126.5 15.3 165 548-726 35-199 (690)
454 KOG4237 Extracellular matrix p 99.1 1.3E-11 2.9E-16 130.6 0.5 90 361-451 270-363 (498)
455 cd05146 RIO3_euk RIO kinase fa 99.1 8.7E-10 1.9E-14 111.0 13.4 135 532-679 3-174 (197)
456 PRK15387 E3 ubiquitin-protein 99.1 3.5E-10 7.5E-15 135.0 10.7 96 342-446 343-457 (788)
457 KOG0532 Leucine-rich repeat (L 99.1 1.2E-11 2.6E-16 136.3 -2.8 103 342-448 144-248 (722)
458 COG3642 Mn2+-dependent serine/ 99.0 2.4E-09 5.1E-14 104.1 12.3 131 532-678 2-140 (204)
459 cd05154 ACAD10_11_like Acyl-Co 99.0 2.4E-09 5.2E-14 110.9 13.0 142 532-678 4-206 (223)
460 PRK15370 E3 ubiquitin-protein 99.0 5.8E-10 1.3E-14 133.8 7.8 159 266-446 221-379 (754)
461 PRK15370 E3 ubiquitin-protein 99.0 1.4E-09 3.1E-14 130.5 10.8 161 265-447 241-401 (754)
462 KOG3087 Serine/threonine prote 98.9 7.3E-09 1.6E-13 100.1 11.9 140 532-677 13-164 (229)
463 PRK15387 E3 ubiquitin-protein 98.9 1.5E-09 3.3E-14 129.6 8.8 84 341-432 382-465 (788)
464 KOG0618 Serine/threonine phosp 98.9 8.6E-11 1.9E-15 136.3 -1.9 173 265-447 241-443 (1081)
465 PF14580 LRR_9: Leucine-rich r 98.9 6.6E-10 1.4E-14 109.7 3.7 102 341-447 19-126 (175)
466 KOG0532 Leucine-rich repeat (L 98.8 2E-10 4.4E-15 126.8 -2.7 157 266-435 99-256 (722)
467 KOG3741 Poly(A) ribonuclease s 98.8 7.4E-08 1.6E-12 106.3 16.3 169 540-729 290-475 (655)
468 PF13855 LRR_8: Leucine rich r 98.8 5.4E-09 1.2E-13 84.9 4.7 59 342-400 2-61 (61)
469 PF13855 LRR_8: Leucine rich r 98.8 3.5E-09 7.7E-14 86.0 3.6 60 365-424 1-61 (61)
470 KOG4237 Extracellular matrix p 98.8 1.1E-09 2.4E-14 116.2 0.6 87 339-425 272-359 (498)
471 KOG0601 Cyclin-dependent kinas 98.8 5E-09 1.1E-13 118.1 5.3 241 531-803 270-518 (524)
472 PF01163 RIO1: RIO1 family; I 98.8 5.4E-08 1.2E-12 97.7 11.7 125 541-679 1-156 (188)
473 PLN03210 Resistant to P. syrin 98.7 2.7E-08 5.9E-13 127.2 10.6 174 264-447 633-838 (1153)
474 COG4886 Leucine-rich repeat (L 98.7 1E-08 2.2E-13 116.4 5.3 174 264-447 115-290 (394)
475 PF14580 LRR_9: Leucine-rich r 98.7 1.3E-08 2.7E-13 100.6 3.9 134 273-441 5-147 (175)
476 PRK15123 lipopolysaccharide co 98.6 3.5E-07 7.5E-12 97.3 13.7 140 532-677 28-193 (268)
477 KOG0606 Microtubule-associated 98.6 6.7E-09 1.4E-13 122.6 -0.2 241 532-794 810-1084(1205)
478 cd00116 LRR_RI Leucine-rich re 98.6 1.6E-08 3.6E-13 110.9 2.7 156 264-444 80-260 (319)
479 PLN03210 Resistant to P. syrin 98.6 1.7E-07 3.6E-12 120.1 11.0 154 266-431 590-743 (1153)
480 KOG1259 Nischarin, modulator o 98.6 6.8E-09 1.5E-13 106.4 -1.4 130 266-430 285-416 (490)
481 COG0478 RIO-like serine/threon 98.5 5.3E-07 1.2E-11 93.0 11.7 134 528-677 93-250 (304)
482 COG4248 Uncharacterized protei 98.5 5.4E-06 1.2E-10 89.6 18.8 263 531-806 16-303 (637)
483 cd00116 LRR_RI Leucine-rich re 98.5 4.1E-08 8.9E-13 107.8 2.7 105 341-445 108-232 (319)
484 KOG1259 Nischarin, modulator o 98.4 5.4E-08 1.2E-12 100.0 -0.0 104 339-447 305-412 (490)
485 KOG1859 Leucine-rich repeat pr 98.4 2.5E-08 5.3E-13 113.1 -3.1 126 321-451 154-296 (1096)
486 PF06293 Kdo: Lipopolysacchari 98.4 3.6E-06 7.8E-11 86.5 12.3 106 566-678 55-170 (206)
487 COG0661 AarF Predicted unusual 98.4 2.1E-06 4.5E-11 98.9 11.4 140 532-680 131-316 (517)
488 KOG2137 Protein kinase [Signal 98.3 1.3E-07 2.9E-12 108.1 1.2 150 633-798 106-264 (700)
489 COG4886 Leucine-rich repeat (L 98.3 3.8E-07 8.2E-12 103.6 4.1 157 266-432 141-297 (394)
490 PRK09902 hypothetical protein; 98.3 1.7E-05 3.8E-10 80.2 14.7 137 534-677 26-178 (216)
491 KOG3207 Beta-tubulin folding c 98.3 1.6E-07 3.4E-12 101.5 -0.4 174 263-447 144-339 (505)
492 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.9E-05 4.2E-10 82.2 13.0 139 532-677 7-181 (226)
493 KOG4579 Leucine-rich repeat (L 98.2 1.3E-07 2.8E-12 86.9 -3.3 89 342-433 28-120 (177)
494 KOG4579 Leucine-rich repeat (L 98.1 4.9E-07 1.1E-11 83.2 -1.4 89 341-432 53-142 (177)
495 COG1718 RIO1 Serine/threonine 98.1 3.5E-05 7.6E-10 79.1 11.7 136 533-679 55-216 (268)
496 KOG1235 Predicted unusual prot 98.0 2.2E-05 4.8E-10 90.2 11.3 141 532-680 167-356 (538)
497 KOG0576 Mitogen-activated prot 98.0 1.2E-06 2.5E-11 99.2 0.6 182 531-730 247-430 (829)
498 PF12799 LRR_4: Leucine Rich r 98.0 4.1E-06 8.9E-11 62.8 3.2 36 366-401 2-37 (44)
499 PF12799 LRR_4: Leucine Rich r 98.0 4.3E-06 9.3E-11 62.7 3.0 39 341-380 1-39 (44)
500 cd05150 APH Aminoglycoside 3'- 98.0 8.7E-05 1.9E-09 78.3 13.7 140 534-677 6-192 (244)
No 1
>PLN03150 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-71 Score=651.24 Aligned_cols=436 Identities=25% Similarity=0.404 Sum_probs=350.0
Q ss_pred CceeccCC-CCCcceeeecccCCceeEEeEEeeecCcCCCCCCCeeEEEeCCceeeeEEec--CCCCceEEEEEEEecCC
Q 003046 1 MTLRHFPA-DSRKYCYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHWSTIVIS--DAATIEVRELIFLASSP 77 (854)
Q Consensus 1 ~tlr~fp~-~~~~~cy~~~~~~~~~y~~r~~~~~g~~d~~~~~p~fd~~~~~~~w~~v~~~--~~~~~~~~e~~~~~~~~ 77 (854)
.|+|+||. .++++||++|++++|||+||+.|+|||||+.+++|.|||++|||+|.+|+.+ ..+...++|+|+.++++
T Consensus 70 ~t~R~F~~~~g~~~cY~~~~~~~g~ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~~~~~v~~E~i~~~~~~ 149 (623)
T PLN03150 70 KTLRYFPLSDGPENCYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSSHDEQVFAEALVFLTDG 149 (623)
T ss_pred hccccCCcccccccceEeeecCCCcEEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCcccCCCcEEEEEEEEecCC
Confidence 48999996 3566799999999999999999999999999999999999999999999873 34456789999999999
Q ss_pred CceEEEecCCCCCceeeeeeeeecCCccccCcc--cCceeEEEEEeeecCCCC-CCCccCCCCCC--CCccccCcccccc
Q 003046 78 KIDVCLSNATTGQPFISTLELRQFNGSVYLTPF--EDRYYLSVSARINFGADS-EAPVRYPDDPF--DRIWESDSLKKAN 152 (854)
Q Consensus 78 ~~~vcl~~~~~~~pfis~le~~~l~~~~y~~~~--~~~~~~~~~~r~~~g~~~-~~~iryp~D~~--dR~W~~~~~~~~~ 152 (854)
+++|||++++.|+||||+||||||++++|.... +.+.+|.++.|.++|+.. ...+|||||+| ||+|.|+...
T Consensus 150 ~l~vcf~~~~~~~pFIs~iEv~~l~~~~y~~~~~~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~--- 226 (623)
T PLN03150 150 SASICFHSTGHGDPAILSIEILQVDDKAYNFGPSWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTF--- 226 (623)
T ss_pred cEEEEEecCCCCCCceeEEEEEEcCcccccccccccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCccc---
Confidence 999999999999999999999999999996442 446789999999999853 34699999999 9999997431
Q ss_pred ccccccCCccccccccccCC--CCCCCChHHHhhhcccccCC--ceEEeecCCCCCCcceEEEEeccccC-CCCCCceEE
Q 003046 153 YLVDVAAGTEKVSTKLPIDL--RSDELPPQKVMQTAVVGTNG--SLTYRLNLDGFPGFGWAVTYFAEIED-LDPDESRKF 227 (854)
Q Consensus 153 ~~~~~~~~~~~~st~~~i~~--~~~~~~P~~v~qtA~t~~~~--~l~~~~~~~~~~~~~y~~~yFae~~~-~~~~~~R~F 227 (854)
+ ...|.++++...|+. ..++.+|++|||||.++.++ .+.|.|+++ ....+++.|||+|++. ....++|+|
T Consensus 227 -~---~~~~~~~st~~~I~~~~~~~~~~P~~VyqTA~~~~~~~~~lty~~~v~-~~~~Y~VrLhFaEi~~~~~~~~~R~F 301 (623)
T PLN03150 227 -G---SGSDQAISTENVIKKASNAPNFYPESLYQSALVSTDTQPDLSYTMDVD-PNRNYSVWLHFAEIDNSITAEGKRVF 301 (623)
T ss_pred -C---CCcccccccccccccccCCCccChHHHhhhhccccCCCCceEEEeecC-CCCCEEEEEEEEeccCccCCCceEEE
Confidence 1 223556676666653 34677899999999887664 466666644 3345569999999984 557789999
Q ss_pred EEEECCcccccccccccccccCcceEEeccccccccccceeeeecccCCCCCCCcccchhhhceeccCCC--CCccHHHH
Q 003046 228 RLVLPGQPDVSKAIVNIQENAQGKYRVYEPGYTNLSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERND--GSIDGVAI 305 (854)
Q Consensus 228 dv~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~--~~~~~~~~ 305 (854)
||++||+..++...+. ....+.+..+...+......+..+++|.+... -||+|||+|++++..... ...+..++
T Consensus 302 ~V~ing~~~~~~~di~--~~~g~~~~~~~~~~~v~~~~g~l~isl~p~~~--s~pilNaiEI~~~~~~~~~t~~~~~~aL 377 (623)
T PLN03150 302 DVLINGDTAFKDVDIV--KMSGERYTALVLNKTVAVSGRTLTIVLQPKKG--THAIINAIEVFEIITAESKTLLEEVSAL 377 (623)
T ss_pred EEEECCEEeecccChh--hhcCCcccceEEEeEEeecCCeEEEEEeeCCC--CcceeeeeeeeeccccccccCchHHHHH
Confidence 9999998876654432 11112221111111111112445667777553 479999999999988654 56677888
Q ss_pred HHHHhhcCC---CCccCCCCCCCCCC--CCCeeEeCCCC---CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcc
Q 003046 306 VSVISLYSS---ADWAQEGGDPCLPV--PWSWLQCNSDP---QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSL 377 (854)
Q Consensus 306 ~~l~~l~~~---~~~~~~~~dpc~~~--~~~~~~c~~~~---~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l 377 (854)
..+|+.... .+| ++|||.|. +|.|+.|+.+. ...++.|+|++|+|+|.+|..|++|++|+.|+|++|+|
T Consensus 378 ~~~k~~~~~~~~~~W---~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l 454 (623)
T PLN03150 378 QTLKSSLGLPLRFGW---NGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSI 454 (623)
T ss_pred HHHHHhcCCcccCCC---CCCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcc
Confidence 888887543 267 78999875 69999996432 23589999999999999999999999999999999999
Q ss_pred cccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccccccccccc---cccccccccCCcccccCC
Q 003046 378 TGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 378 ~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l~---~~l~~l~~~~n~~~~~~~ 451 (854)
+|.+|. ++.|++|+.|+|++|+|+|.+|+.+++|++|+.|+|++|+|+|.+|..+. .++..+++.+|+.+|+..
T Consensus 455 ~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 455 RGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred cCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 998885 99999999999999999999999999999999999999999999999874 345678999999999754
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.2e-56 Score=558.67 Aligned_cols=510 Identities=26% Similarity=0.401 Sum_probs=375.1
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCe-eEeCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSW-LQCNSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~-~~c~~~~~ 340 (854)
.++.|..|+|+.|.++..+|. +..+..|+.|++++|.+....+..+ ....+..+.. .-|. ..+ +.....++
T Consensus 426 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~l---s~n~---l~~~~~~~~~~l 498 (968)
T PLN00113 426 KLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDL---SRNQ---FSGAVPRKLGSL 498 (968)
T ss_pred cCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEEC---cCCc---cCCccChhhhhh
Confidence 366788999999999977765 7788999999999988754222211 1122222211 1110 111 11123457
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++|+.|+|++|++++.+|..+.+|++|+.|+|++|++++.+|. |.++++|+.|+|++|+++|.+|..+.++++|+.|++
T Consensus 499 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l 578 (968)
T PLN00113 499 SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNI 578 (968)
T ss_pred hccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEec
Confidence 7899999999999999999999999999999999999998886 899999999999999999999999999999999999
Q ss_pred ccccccccccccc-ccccccccccCCcccccCCC-----------CccccceeecchhhHHHHHHHhhheeeeeecCCCc
Q 003046 420 QNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGGR-----------GAKHLNIIIGSSVGAAVLLLATVVSCLFMHKGKKN 487 (854)
Q Consensus 420 ~~N~l~g~ip~~l-~~~l~~l~~~~n~~~~~~~~-----------~~~~~~iii~~~vg~~~lll~~~~~~~~~~~~K~~ 487 (854)
++|++.|.+|..- +..+....+.||+.+|+... ......++++.+++++++++++++++++++ +|++
T Consensus 579 s~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 657 (968)
T PLN00113 579 SHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIR-GRNN 657 (968)
T ss_pred cCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHH-hhhc
Confidence 9999999999764 55566677899999997531 111122344444444443333333222222 2211
Q ss_pred cCccccccccCCccCCCCCCCCCccccccccCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccch
Q 003046 488 NYDKEQHRHSLPVQRPVSSLNDAPAEAAHCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGK 566 (854)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~ 566 (854)
...+... . .................++..++... ....+.||+|+||.||+|+.. +++.||||++.....
T Consensus 658 ~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--- 728 (968)
T PLN00113 658 LELKRVE-N----EDGTWELQFFDSKVSKSITINDILSS-LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--- 728 (968)
T ss_pred ccccccc-c----ccccccccccccccchhhhHHHHHhh-CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---
Confidence 1111000 0 00000000000111122344444332 223568999999999999874 789999999864321
Q ss_pred hchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC
Q 003046 567 REFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC 646 (854)
Q Consensus 567 ~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~ 646 (854)
...+|++.+++++||||++++|+|.+++..++||||+++|+|.++++ .++|..+.+|+.|+|+||+|||..+
T Consensus 729 -~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 729 -IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCC
Confidence 23457899999999999999999999999999999999999999984 2789999999999999999999777
Q ss_pred CCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhC
Q 003046 647 VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISG 726 (854)
Q Consensus 647 ~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG 726 (854)
.++|+||||||+||+++.++.+++. ||.+...... ....||+.|+|||++.+..++.++|||||||++|||+||
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg 874 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTG 874 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhC
Confidence 7799999999999999999988876 6665432211 123588999999999999999999999999999999999
Q ss_pred CcccccccccccccchHHHHHHhhhcCCcccccCCcccCc--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 727 QEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE--YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 727 ~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
+.||.... .....+++|++..........++|+.+... .+.++..++.+++.+|++.+|++||+|.||++.|+++.
T Consensus 875 ~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~ 952 (968)
T PLN00113 875 KSPADAEF--GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952 (968)
T ss_pred CCCCCccc--CCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence 99995432 233468888887766666667778777443 34567778999999999999999999999999999864
Q ss_pred H
Q 003046 805 V 805 (854)
Q Consensus 805 ~ 805 (854)
.
T Consensus 953 ~ 953 (968)
T PLN00113 953 R 953 (968)
T ss_pred c
Confidence 3
No 3
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=100.00 E-value=5.3e-54 Score=472.24 Aligned_cols=279 Identities=35% Similarity=0.526 Sum_probs=221.9
Q ss_pred CceeccCCCCCcceeeeccc--CCceeEEeEEeeecCcCCCC-----CCCeeEEEeCCceeeeEEecCCC-CceEEE-EE
Q 003046 1 MTLRHFPADSRKYCYKLDVI--TRTRYLIRATFLYGNFDNNN-----VYPKFDISLGPTHWSTIVISDAA-TIEVRE-LI 71 (854)
Q Consensus 1 ~tlr~fp~~~~~~cy~~~~~--~~~~y~~r~~~~~g~~d~~~-----~~p~fd~~~~~~~w~~v~~~~~~-~~~~~e-~~ 71 (854)
+|+|+||+|.| +||++|+. +|+|||||+.|+|||||+++ +||.|||++|+|.|++|++++.. ...++| +|
T Consensus 52 ~taR~F~~g~r-~cY~l~~~~~~~~~yliRl~F~~gnyd~~~fs~~~~~~~FdL~~~~n~~~tV~~~~~~~~~~~~E~ii 130 (347)
T PF12819_consen 52 QTARIFPEGSR-NCYTLPVTPPGGGKYLIRLHFYYGNYDGLNFSVSSSPPTFDLLLGFNFWSTVNLSNSPSSPVVKEFII 130 (347)
T ss_pred ceEEEcCCCCc-cEEEeeccCCCCceEEEEEEeccccccccccccccCCcceEEEECCceeEEEEecCCCcceEEEEEEE
Confidence 58999998877 69999998 57799999999999999874 37899999999999999987622 357899 66
Q ss_pred EEecCCCceEEEecCCCCC-ceeeeeeeeecCCccccCc-ccCceeEEEEEeeecCCCCCCCccCCCCCCCCccccCccc
Q 003046 72 FLASSPKIDVCLSNATTGQ-PFISTLELRQFNGSVYLTP-FEDRYYLSVSARINFGADSEAPVRYPDDPFDRIWESDSLK 149 (854)
Q Consensus 72 ~~~~~~~~~vcl~~~~~~~-pfis~le~~~l~~~~y~~~-~~~~~~~~~~~r~~~g~~~~~~iryp~D~~dR~W~~~~~~ 149 (854)
+++++++++|||+++++|+ ||||+||||||++++|+.. ...+.+|.++.|.++|+... .||||+|+|||+|+|+..
T Consensus 131 ~v~~~~~l~vclv~~~~g~~pFIsaiEl~~lp~~ly~~~~~~~s~~L~~~~R~n~G~~~~-~iryp~D~~dR~W~~~~~- 208 (347)
T PF12819_consen 131 NVTWSDTLSVCLVPTGSGTFPFISAIELRPLPDSLYPDTDANSSQALETVYRLNVGGSSS-FIRYPDDTYDRIWQPYSS- 208 (347)
T ss_pred EEcCCCcEEEEEEeCCCCCCCceeEEEEEECCccceeccccCCCceeEEEEeecCCCccc-ccCCCCCcceeecccccc-
Confidence 6666999999999999999 9999999999999999532 35678899999999998654 399999999999998521
Q ss_pred cccccccccCCccccccccccC---CCCCCCChHHHhhhcccccCCc--eEEeecCCCCCCcceEEEEeccccCCCCCC-
Q 003046 150 KANYLVDVAAGTEKVSTKLPID---LRSDELPPQKVMQTAVVGTNGS--LTYRLNLDGFPGFGWAVTYFAEIEDLDPDE- 223 (854)
Q Consensus 150 ~~~~~~~~~~~~~~~st~~~i~---~~~~~~~P~~v~qtA~t~~~~~--l~~~~~~~~~~~~~y~~~yFae~~~~~~~~- 223 (854)
...|.+++++.+|+ ...++.||.+|||||+++.+.+ +.+.|..++....+|++|||||++.+..++
T Consensus 209 --------~~~~~~ist~~~i~~~~~~~~~~~P~~V~~TA~~~~~~s~~~nltw~~~~~~~~y~v~lHFaEi~~~~~~~~ 280 (347)
T PF12819_consen 209 --------SPGWSNISTTSNININSSNNPYDAPSAVYQTARTPSNSSDPLNLTWSFVDPGFSYYVRLHFAEIQSLSPNNN 280 (347)
T ss_pred --------CccccccccceeeecccCCccCcChHHHHHhhhcccccccceEEEeccCCCCccEEEEEEEeecccccCCCC
Confidence 34578888877775 2348999999999999998875 889998855556677999999999985444
Q ss_pred ceEEEEEECCcccccccccccccccCcceEEeccccccccccceeeeecccCCCCCCCcccchhhhcee
Q 003046 224 SRKFRLVLPGQPDVSKAIVNIQENAQGKYRVYEPGYTNLSLPFVLSFKFGKTYDSSRGPLLNAMEINKY 292 (854)
Q Consensus 224 ~R~Fdv~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l~~l~L~~n~~s~lpP~i~~le~l~~ 292 (854)
+|+|||++||+..+++ +.+.........+|.............+++|.++..|+|||+|||||++++
T Consensus 281 ~R~F~IyiN~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~isL~~t~~S~lppiLNalEIy~v 347 (347)
T PF12819_consen 281 QREFDIYINGQTAYSD--VSPPYLGADTVPYYSDYVVNVPDSGFLNISLGPTPDSTLPPILNALEIYKV 347 (347)
T ss_pred eEEEEEEECCeEccCc--cCcccccCcceEeecceEEEecCCCEEEEEEEeCCCCCcCceeEeeeeEeC
Confidence 7999999999988752 222111111112222111222233456788999999999999999999874
No 4
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-53 Score=469.49 Aligned_cols=288 Identities=49% Similarity=0.859 Sum_probs=254.7
Q ss_pred cccccCHHHHHHHHHHhh--ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeee
Q 003046 514 AAHCFTLSDIEDATKMLE--KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC 591 (854)
Q Consensus 514 ~~~~~~~~~i~~~~~~~~--~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~ 591 (854)
....|++.++..+|.+|. +.||+|+||.||+|.+.+|+.||||++........++|..|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 456799999999999996 799999999999999999999999988765433156699999999999999999999999
Q ss_pred eecC-eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEE
Q 003046 592 QEEG-RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 592 ~~~~-~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL 670 (854)
.+.+ +.+||||||++|+|.++|+..... .++|.+|++||.++|+||+|||+.|.++||||||||+|||||+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9998 599999999999999999875432 8899999999999999999999999889999999999999999999999
Q ss_pred EEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 671 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
+|||+|+.......+......||.+|+|||++..+..++|+|||||||+|+||+||+++.+... +.....+++|++..+
T Consensus 219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~-~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR-PRGELSLVEWAKPLL 297 (361)
T ss_pred cCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC-CcccccHHHHHHHHH
Confidence 9999997654312222222179999999999999999999999999999999999999887654 444557999999999
Q ss_pred hcCCcccccCCccc-CcCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLL-DEYDI-QSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 751 ~~~~~~~~id~~l~-~~~~~-~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.++++.+++|+.+. +.+.. +++.++..+|.+|++.+|++||+|.||+++|+.+.
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 99999999999997 66665 78999999999999999999999999999996543
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-44 Score=396.05 Aligned_cols=254 Identities=34% Similarity=0.557 Sum_probs=210.9
Q ss_pred hhccccccCcEEEEEEEECCCcEEEEEEEecCCccc--hhchHHHHHHhhhcCCCceeeEeeeeeecC-eEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG--KREFTNEVTLLSRIHHRNLVQFLGYCQEEG-RSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~--~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~~lV~e~~~~ 606 (854)
+.+.||+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. ..++|||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 456699999999999999843449999997653322 558999999999999999999999999887 79999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc-eeccCCCCCCeEEcCCC-cEEEEEecccccccCCCc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA-IIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~~~~ 684 (854)
|+|.++++.. ....+++..++.++.|||+||+|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 125 GSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 9999999754 467899999999999999999999998 7 99999999999999997 99999999998654332
Q ss_pred ceeecccccccccCccccc--cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 685 HVSSIVRGTVGYLDPEYYI--SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~--~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
...+...||+.|||||++. ...++.|+|||||||+||||+||+.||.+... ..+.. ..... .
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~---~v~~~---------~ 262 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQVAS---AVVVG---------G 262 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHHHH---HHHhc---------C
Confidence 2233367999999999999 66999999999999999999999999987652 11111 11111 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+...+..+...+..++.+||+.||+.||++.+++..|+.+..
T Consensus 263 ~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 263 LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 1222233355678899999999999999999999999998765
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-44 Score=390.80 Aligned_cols=261 Identities=28% Similarity=0.440 Sum_probs=222.5
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 522 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
++......+.+.||+|-||.||.|.++....||+|.++... ....+|.+|+++|++++|+|||+++|+|..++.++|||
T Consensus 202 ei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 202 EIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred eecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 45555666789999999999999999977799999998653 34578889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
|||+.|+|.++|+. ..+..+...+.+.++.|||+|++||+++ ++|||||.++||||+++..+||+|||||+...+
T Consensus 281 E~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCC
Confidence 99999999999975 3467788999999999999999999999 999999999999999999999999999996666
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
+.........-+..|.|||.+..+.++.|||||||||+||||+| |+.|+.++...+ ++ ..++.|
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e----v~----~~le~G------- 420 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE----VL----ELLERG------- 420 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH----HH----HHHhcc-------
Confidence 65555555556789999999999999999999999999999999 899988766221 11 222222
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+-..+..+...+.+|...||+.+|++|||++.+...|+.+..
T Consensus 421 --yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 421 --YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred --CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 2333344566789999999999999999999999998887653
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=370.63 Aligned_cols=256 Identities=29% Similarity=0.409 Sum_probs=210.2
Q ss_pred cCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC-CccchhchHHHHHHhhhcCCCceeeEeeeeeecC
Q 003046 518 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 518 ~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~ 595 (854)
++..|++. ...||+|..|+|||++++ +++-+|+|++... .....+++.+|++++++++||+||.++|.|...+
T Consensus 76 i~~~dle~-----~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 76 ISLSDLER-----LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG 150 (364)
T ss_pred cCHHHhhh-----hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC
Confidence 55666653 467999999999999998 6788999999544 3445788999999999999999999999999998
Q ss_pred -eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEec
Q 003046 596 -RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 596 -~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFG 674 (854)
...++||||.+|+|++++.. .+++++....+|+.++++||.|||+. .+||||||||+||||+..|++||||||
T Consensus 151 ~~isI~mEYMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFG 224 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFG 224 (364)
T ss_pred ceEEeehhhcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEecccc
Confidence 59999999999999999843 36799999999999999999999973 299999999999999999999999999
Q ss_pred ccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc-cccccchHHHHHHhhhcC
Q 003046 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-GANCRNIVQWAKLHIESG 753 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~-~~~~~~l~~~~~~~~~~~ 753 (854)
.++.+.+. ......||..|||||.+.+..|+.++||||||+.++|+.+|+.|+..... ....-.+..++- . +
T Consensus 225 VS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv---~-~ 297 (364)
T KOG0581|consen 225 VSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV---D-E 297 (364)
T ss_pred ccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh---c-C
Confidence 99876554 44566799999999999999999999999999999999999999976421 111112222211 1 1
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. |.+... ....++..++..|+++||.+||++.|+++|
T Consensus 298 pp-----P~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 298 PP-----PRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CC-----CCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11 222222 234568899999999999999999999987
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-44 Score=356.64 Aligned_cols=259 Identities=27% Similarity=0.399 Sum_probs=212.3
Q ss_pred HHHHhhccccccCcEEEEEEEE-CCCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEee-eeeecCe-EEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLG-YCQEEGR-SVLV 600 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g-~~~~~~~-~~lV 600 (854)
+.+.+.++||+|.||+|||+.. .+|..||.|.+.-. ......+...|+.+|++++|||||++++ -+.++.. +.+|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3456788999999999999964 48999999988743 2344567889999999999999999998 4444444 8999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
||+|..|+|...+.......+.+++..+++++.|++.||.++|... +. |+||||||.||+|+.+|.|||+|||++++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999877777888999999999999999999999942 24 89999999999999999999999999998
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
+....+ .....+|||.||+||.+.+..|+.|+||||+||++|||+.-+.||.+.+.-+. ..+++.++...+
T Consensus 178 l~s~~t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L--------~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 178 LSSKTT-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSL--------CKKIEQGDYPPL 248 (375)
T ss_pred hcchhH-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHH--------HHHHHcCCCCCC
Confidence 765433 34456799999999999999999999999999999999999999987753222 234455544332
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
-| .-....+.+|+..|+.+||+.||+...+++.+..
T Consensus 249 p~--------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 PD--------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cH--------HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 22 2334568899999999999999996666655554
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-43 Score=371.04 Aligned_cols=253 Identities=26% Similarity=0.400 Sum_probs=205.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc-------chhchHHHHHHhhhcCCCceeeEeeeeeecCe
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~-------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~ 596 (854)
...|.+.+.||+|+||.|-+|.-+ +|+.||||++++.... ......+|+++|++++|||||++++++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 345566889999999999999765 7999999999865321 22345799999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC---CcEEEEEe
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDF 673 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~~kL~DF 673 (854)
.|+|||||+||.|.+++- ..+.+.+..-..++.|++.|+.|||+. ||+||||||+|||+..+ ..+||+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv----~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVV----ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred eEEEEEEecCccHHHHHH----hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 999999999999999984 344566666678999999999999999 99999999999999866 78999999
Q ss_pred cccccccCCCcceeecccccccccCccccccCcC---CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 674 GLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQL---TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 674 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~---s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
|+|+... ....+.+.+||+.|.|||++.+... ..++|+||+|||||-+++|.+||.+...+.. +.+ ++
T Consensus 324 GlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s---l~e----QI 394 (475)
T KOG0615|consen 324 GLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS---LKE----QI 394 (475)
T ss_pred chhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc---HHH----HH
Confidence 9999765 4566778899999999999987543 3478999999999999999999987653321 111 12
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..|++.. ......+...+..+++.+++..||++||++.|+++|
T Consensus 395 ~~G~y~f------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 395 LKGRYAF------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hcCcccc------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2222210 111223455678999999999999999999999987
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.8e-43 Score=383.43 Aligned_cols=248 Identities=25% Similarity=0.411 Sum_probs=210.8
Q ss_pred HHHHhhccccccCcEEEEEEEE-CCCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+|...+.||+|+|+.||.++. ..|+.||+|++.+.. ........+||+|.+.|+|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4566678999999999999988 789999999998642 334566889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
|+|++++|.+++. ..+.+++.++..+..||+.||.|||+. +|+|||||..|+||++++++||+|||||.....
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999884 467799999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. .+...+.+|||.|+|||++.....+..+||||+||+||-||.|++||+.....+....+.. .+. .
T Consensus 171 ~-~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~--------~~Y---~-- 236 (592)
T KOG0575|consen 171 D-GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL--------NEY---S-- 236 (592)
T ss_pred c-ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh--------cCc---c--
Confidence 3 2344567899999999999999999999999999999999999999987764333322211 111 1
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.....+..+|+..+++.+|.+|||+++|+.|
T Consensus 237 -----~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 237 -----MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -----cccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111223356799999999999999999999976
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=365.61 Aligned_cols=198 Identities=31% Similarity=0.548 Sum_probs=177.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||+||+|+++ ++.+||||.+... .....+.+..|+.+|+.++|||||.|++++..++..+||||||
T Consensus 12 y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC 91 (429)
T KOG0595|consen 12 YELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYC 91 (429)
T ss_pred ceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeC
Confidence 334567999999999999987 5889999999766 3445667889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC------CcEEEEEeccccc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH------MRAKVSDFGLSKF 678 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~------~~~kL~DFGla~~ 678 (854)
.||+|.++|+. .+++++.....++.|+|.||++||++ +||||||||+||||+.. -.+||+|||+|+.
T Consensus 92 ~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 92 NGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred CCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 99999999953 45799999999999999999999999 99999999999999865 5689999999998
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~ 734 (854)
+.+ .....+.+|++-|||||++...+|+.|+|+||+|+|+|||++|+.||...+
T Consensus 165 L~~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 165 LQP--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred CCc--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 764 344566789999999999999999999999999999999999999998655
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=387.88 Aligned_cols=264 Identities=25% Similarity=0.452 Sum_probs=224.2
Q ss_pred HHHHHHHHHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecC
Q 003046 521 SDIEDATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 521 ~~i~~~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~ 595 (854)
.||......++++||.|.||.||+|+++ ....||||.++... ...+++|..|+.||.+..||||++|.|+.....
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~ 703 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK 703 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc
Confidence 3555556667899999999999999987 24579999998764 445778999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
..++|.|||++|+|+.||+.. ..++.+.+...+..+||.|+.||.+. ++|||||.++||||+.+..+|++|||+
T Consensus 704 PvMIiTEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 704 PVMIITEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred eeEEEhhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccc
Confidence 999999999999999999754 46699999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCcceeecccc--cccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhc
Q 003046 676 SKFAVDGASHVSSIVRG--TVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIES 752 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~ 752 (854)
++.+.++.....+..-| +.+|.|||.+..++++.++|||||||||||.++ |.+||.++..++. +
T Consensus 778 SRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV----I--------- 844 (996)
T KOG0196|consen 778 SRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV----I--------- 844 (996)
T ss_pred eeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH----H---------
Confidence 99776655333322222 479999999999999999999999999999887 9999987763221 1
Q ss_pred CCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 753 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 753 ~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
..++..++-..++++...+.+|++.||++|-.+||.+.||+..|++++...
T Consensus 845 ----kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 845 ----KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred ----HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 112233444556778889999999999999999999999999999987644
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-41 Score=384.71 Aligned_cols=262 Identities=27% Similarity=0.465 Sum_probs=217.9
Q ss_pred HHHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCe
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~ 596 (854)
......+.+.||+|+||+||+|+.. +.+-||||.++..... ...+|++|++++..++|||||+|+|.|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3333346788999999999999864 3456999999877554 67899999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHhhccccc------c----cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLT------H----EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 666 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~------~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~ 666 (854)
.++|+|||..|+|.+||+.... . ...|+..+.+.||.|||.|++||-+. .+|||||..+|+||.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 9999999999999999964321 2 22388899999999999999999998 999999999999999999
Q ss_pred cEEEEEecccccccCCCcceee-cccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHH
Q 003046 667 RAKVSDFGLSKFAVDGASHVSS-IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQ 744 (854)
Q Consensus 667 ~~kL~DFGla~~~~~~~~~~~~-~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~ 744 (854)
.|||+|||++|.....+.+... ...-+.+||+||.+..++++.+||||||||||||+++ |+.|+.+.... +.++
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~----EVIe 716 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ----EVIE 716 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH----HHHH
Confidence 9999999999866554444332 3334789999999999999999999999999999999 99999876522 2333
Q ss_pred HHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 745 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 745 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
. ++.|.+ -..+..+..++.+|...||+..|++||+++||...|+....
T Consensus 717 ~----i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 717 C----IRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred H----HHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 2 333333 23445667789999999999999999999999999998654
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=335.72 Aligned_cols=272 Identities=21% Similarity=0.251 Sum_probs=205.9
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
...++|+|+||+|||++.+ +|+.||||++.... ..-++-..+|+++|++++|+|+|.|+++|.....++||+|||+.
T Consensus 6 ~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh 85 (396)
T KOG0593|consen 6 KLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH 85 (396)
T ss_pred hhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence 3457999999999999988 59999999986442 33355678999999999999999999999999999999999987
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
.-|.++-+ ....++.....+++.|++.|+.|+|++ ++|||||||+||||+.++.+||||||+|+.+.. ....
T Consensus 86 TvL~eLe~----~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~ 157 (396)
T KOG0593|consen 86 TVLHELER----YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDN 157 (396)
T ss_pred HHHHHHHh----ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Ccch
Confidence 55554332 234577888899999999999999999 999999999999999999999999999997653 3334
Q ss_pred eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-------HHhh-hcCCccc
Q 003046 687 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KLHI-ESGDIQG 757 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-------~~~~-~~~~~~~ 757 (854)
.+..+.|.+|+|||.+.+ .+|...+||||+||++.||++|.+.|.+...-+..-.|.... ...+ .+..+..
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 455668999999999998 789999999999999999999999998765111000111110 0111 1111222
Q ss_pred ccCCcccC-----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHHHHHHHH
Q 003046 758 IIDPSLLD-----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDAIVIERE 809 (854)
Q Consensus 758 ~id~~l~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~~~~~~~~ 809 (854)
+.-|.... .-.......+++++..|++.||++|++-+|++.| ++..+.++..
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~er~~~ 296 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIERELK 296 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHHHHHH
Confidence 22111111 1112223468899999999999999999999876 5555555433
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-40 Score=343.33 Aligned_cols=246 Identities=28% Similarity=0.405 Sum_probs=201.2
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.++||+|+||.||.++.+ +++.+|+|++++.... ..+...+|..+|.+++||.||+++-.|.+.+.++||+||+
T Consensus 28 ~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~ 107 (357)
T KOG0598|consen 28 EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYL 107 (357)
T ss_pred eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEecc
Confidence 35789999999999999876 5889999999876432 3456788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
.||.|.-+| ++++.+++..+.-++.+|+.||.|||++ +||||||||+|||||.+|+++|+|||+++..... .
T Consensus 108 ~GGeLf~hL----~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~-~ 179 (357)
T KOG0598|consen 108 NGGELFYHL----QREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD-G 179 (357)
T ss_pred CCccHHHHH----HhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccC-C
Confidence 999999999 4577899999999999999999999999 9999999999999999999999999999854332 2
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
..+...+||+.|||||++.+..|+.++|.||+|+++|||++|.+||...+..... ..... +++ ...
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~-------~~I~~-~k~------~~~ 245 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY-------DKILK-GKL------PLP 245 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH-------HHHhc-CcC------CCC
Confidence 3344578999999999999999999999999999999999999999876532222 22111 110 001
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC----CHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRP----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP----sm~eV~~~ 799 (854)
..+ ......+++...++.+|++|- ++.+|-+|
T Consensus 246 p~~---ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 246 PGY---LSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred Ccc---CCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 111 122467888899999999996 45555444
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-39 Score=346.88 Aligned_cols=260 Identities=24% Similarity=0.336 Sum_probs=202.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV~e~ 603 (854)
...++||+|.||.||+|+.. +|+.||+|+++-+. ........+||.||++++||||++|.+...+. +.+|||+||
T Consensus 120 eki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeY 199 (560)
T KOG0600|consen 120 EKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEY 199 (560)
T ss_pred HHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEec
Confidence 34578999999999999754 79999999997654 33445677899999999999999999998776 689999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
|+. +|..++.. ..-.++..++..++.|++.||+|||++ +|+|||||.+|||||.+|.+||+|||||+++....
T Consensus 200 Mdh-DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 200 MDH-DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred ccc-hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 986 77777742 355789999999999999999999999 99999999999999999999999999999887766
Q ss_pred cceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchH---------HHHHHhhhcC
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV---------QWAKLHIESG 753 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~---------~~~~~~~~~~ 753 (854)
....+..+-|++|+|||++.+ ..|+.++|+||.||||.||+.|++.|.+.+.-+-...|. .|....+..
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~- 351 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH- 351 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc-
Confidence 665666778999999999997 579999999999999999999999998765211110111 021111100
Q ss_pred CcccccCC------cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDP------SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~------~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+-+ .+... -.......++|+..+|..||.+|.|+.++++.
T Consensus 352 --~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 352 --ATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred --ccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 001100 00000 01112457789999999999999999998864
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-39 Score=351.56 Aligned_cols=264 Identities=28% Similarity=0.497 Sum_probs=209.6
Q ss_pred HHHHHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeE
Q 003046 520 LSDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 520 ~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 597 (854)
..||......+.+.||+|.||+||+|+|. ..||||++.... .+..+.|+.|+..+++-+|.||+-++|||..+..
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~- 462 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL- 462 (678)
T ss_pred ccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence 33455555567899999999999999997 579999998664 3346789999999999999999999999999887
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
.+|+.+|+|-+|..+|+.. +.+++-.+.+.|+.|||+|+.|||.+ +|||||||..||++.+++.|||+|||++.
T Consensus 463 AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEeccccee
Confidence 9999999999999999854 46688889999999999999999999 99999999999999999999999999985
Q ss_pred cccCC-CcceeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC
Q 003046 678 FAVDG-ASHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 678 ~~~~~-~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
.-..- .........|...|||||++.. .+|+..+||||||||+|||++|..||....... ++ | .+..|
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq----Ii-f---mVGrG 608 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ----II-F---MVGRG 608 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh----eE-E---Eeccc
Confidence 32111 1112223347889999999974 468999999999999999999999998433111 10 0 11122
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+. .|.. .....+.+++.+|+..|+..++++||.+.+|+..|++++.
T Consensus 609 ~l~--pd~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 YLM--PDLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccC--ccch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 111 1111 1123455678899999999999999999999999998765
No 18
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.4e-39 Score=355.19 Aligned_cols=262 Identities=26% Similarity=0.413 Sum_probs=203.2
Q ss_pred HHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeec-C
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE-G 595 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-~ 595 (854)
...+.+.++||+|+||.||+|.+. +++.||||++.... ......+.+|+.++.++ +||||++++++|... +
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 345667889999999999999742 35679999987543 22345688999999999 899999999988764 4
Q ss_pred eEEEEEEecCCCCHHHhhccccc---------------------------------------------------------
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLT--------------------------------------------------------- 618 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~--------------------------------------------------------- 618 (854)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999999864211
Q ss_pred -ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce-eecccccccc
Q 003046 619 -HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV-SSIVRGTVGY 696 (854)
Q Consensus 619 -~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~Y 696 (854)
....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... .....+++.|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 013477888899999999999999998 99999999999999999999999999997654332221 2233467889
Q ss_pred cCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHH
Q 003046 697 LDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKI 775 (854)
Q Consensus 697 ~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l 775 (854)
+|||++.+..++.++|||||||++|||++ |..||......+ .+. ..+..+.... . +......+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~---~~~----~~~~~~~~~~-----~----~~~~~~~l 306 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE---EFC----QRLKDGTRMR-----A----PENATPEI 306 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH---HHH----HHHhcCCCCC-----C----CCCCCHHH
Confidence 99999999999999999999999999997 999997644211 111 1122221111 0 11123457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 776 EEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 776 ~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+++.+|++.+|++||++.||++.|+.++.
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 899999999999999999999999998754
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-39 Score=346.86 Aligned_cols=247 Identities=26% Similarity=0.356 Sum_probs=205.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.|++.||.|+|++|++|+.+ .++++|||++.+.- ....+....|-..|.+| .||.|++|+-.|.++..+|+|+|
T Consensus 75 F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe 154 (604)
T KOG0592|consen 75 FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLE 154 (604)
T ss_pred cchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEE
Confidence 347889999999999999866 68999999987542 22334567888999999 89999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.++|. +.+.+++.....++.+|+.||+|||++ |||||||||+|||||.||++||+|||.|+.+.+.
T Consensus 155 ~A~nGdll~~i~----K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 155 YAPNGDLLDLIK----KYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred ecCCCcHHHHHH----HhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 999999999995 457899999999999999999999999 9999999999999999999999999999876543
Q ss_pred Ccc----------ee--ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 683 ASH----------VS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 683 ~~~----------~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
... .. ...+||..|.+||++.....+..+|+|+|||+||+|+.|++||.+.+.--..+.+..
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~------ 301 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA------ 301 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH------
Confidence 211 11 346799999999999999999999999999999999999999987662211212211
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+|=.+...++ ..+.+|+.+.+..||.+|++..||.+|
T Consensus 302 --------l~y~fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 302 --------LDYEFPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred --------hcccCCCCCC----HHHHHHHHHHHccCccccccHHHHhhC
Confidence 1111222223 457899999999999999999999988
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.8e-38 Score=316.05 Aligned_cols=262 Identities=22% Similarity=0.298 Sum_probs=203.6
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+|.-.++||+|.||.||+|+.. +|+.||||+++..... -.....+|+..|+.++|+||+.++++|...+...||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 4555689999999999999765 7999999999755322 245678999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
|+. +|...+++ +...+...++..++.++++||+|||++ .|+||||||.|+|++.+|.+||+|||+|+.+....
T Consensus 83 m~t-dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 83 MPT-DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ccc-cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 975 89888864 356688889999999999999999999 99999999999999999999999999999876554
Q ss_pred cceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh--hhcCCccc---
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH--IESGDIQG--- 757 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~--~~~~~~~~--- 757 (854)
...... +-|.+|+|||.+.+ +.|+..+||||.|||+.||+-|.+-|.+.+ +.+++...++.. ..+....+
T Consensus 156 ~~~~~~-V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s---DidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 156 RIQTHQ-VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS---DIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred cccccc-eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc---hHHHHHHHHHHcCCCCcccCccccc
Confidence 333333 57999999999886 679999999999999999999998887654 111222211111 01111111
Q ss_pred ccC--------CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IID--------PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id--------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+-| .......-..+....++++..++..||.+|+++.|.++|
T Consensus 232 lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 000 000111112233456899999999999999999999876
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-39 Score=340.69 Aligned_cols=254 Identities=25% Similarity=0.358 Sum_probs=200.7
Q ss_pred HHhhccccccCcEEEEEEEECC-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecC--eEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--~~~lV~e~~ 604 (854)
+...+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|++++|||||+.+|...... .+.+.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 4456889999999999998874 8999999987553333566899999999999999999999855444 689999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEecccccccC--
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVD-- 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~~~~~-- 681 (854)
++|+|.+++... +..+++..+..+..||++||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 99 PGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred CCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 999999999643 12699999999999999999999998 9999999999999999 79999999999986553
Q ss_pred CCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
..........||+.|||||++..+ ....++||||+||++.||+||+.||.... ....+......++...
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~------~~~~~~~~ig~~~~~P---- 242 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF------EEAEALLLIGREDSLP---- 242 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc------chHHHHHHHhccCCCC----
Confidence 222333456799999999999964 33459999999999999999999997531 1122222222222111
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..+........+++.+|++.+|++|||+.++++|---
T Consensus 243 -----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 243 -----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred -----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 1122233357789999999999999999999998553
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=335.41 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=207.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccc-hhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.|.+.+.||.|..++||+|+.. .++.||||++.-..... ...+.+|++.|+.++||||++.+..|..+..+++||.||
T Consensus 27 ~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfM 106 (516)
T KOG0582|consen 27 DYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFM 106 (516)
T ss_pred ceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhh
Confidence 4667889999999999999765 68999999997665443 478899999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
.+|++.+.+......+ +++..+..|.+++++||.|||++ |.||||||+.||||+.+|.|||+|||.+-.+.+...
T Consensus 107 a~GS~ldIik~~~~~G--l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 107 AGGSLLDIIKTYYPDG--LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred cCCcHHHHHHHHcccc--ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999997765443 88999999999999999999999 999999999999999999999999998764443221
Q ss_pred c---eeecccccccccCccccc--cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 685 H---VSSIVRGTVGYLDPEYYI--SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 685 ~---~~~~~~gt~~Y~aPE~~~--~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
. ......||+.|||||++. -..|+.|+||||||+...||.+|..||..... .+.+..- +.+ ......
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP---mkvLl~t----Lqn-~pp~~~ 253 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP---MKVLLLT----LQN-DPPTLL 253 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh---HHHHHHH----hcC-CCCCcc
Confidence 1 114567999999999954 35799999999999999999999999976541 1122221 111 111101
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
-..+..+......+.+.+++..|++.||++|||+++++++
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0011111222334478899999999999999999999876
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=347.04 Aligned_cols=245 Identities=27% Similarity=0.412 Sum_probs=206.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
-.+||+|+.|.||.|... +++.||||++.......++-+.+|+.+|+..+|+|||.+++.+...+.++.|||||++|+|
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence 468999999999999654 6889999999877777778889999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.|.+- ...+++.++..|+.++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+..... ....
T Consensus 358 TDvVt-----~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~T 428 (550)
T KOG0578|consen 358 TDVVT-----KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRST 428 (550)
T ss_pred hhhhh-----cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC-cccc
Confidence 99883 34589999999999999999999999 999999999999999999999999999876655444 4455
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..||+.|||||++....|..|+||||||++++||+-|.+||-.++. ++-......+|.. + + ....
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-------lrAlyLIa~ng~P-~-----l--k~~~ 493 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-------LRALYLIATNGTP-K-----L--KNPE 493 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-------HHHHHHHhhcCCC-C-----c--CCcc
Confidence 6799999999999999999999999999999999999999965431 1111111222221 1 1 1223
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.+++.+|+..|+++||++.|+++|
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 334568899999999999999999999987
No 24
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-39 Score=379.94 Aligned_cols=266 Identities=29% Similarity=0.436 Sum_probs=217.1
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEECC--Cc----EEEEEEEecC-CccchhchHHHHHHhhhcCCCceeeEeeeeeec
Q 003046 522 DIEDATKMLEKKIGSGGFGVVYYGKLKD--GK----EIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE 594 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~--~~----~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~ 594 (854)
++......+.+.||+|+||.||.|...+ |. .||||.++.. +.+...+|.+|..+|++++|||||+++|+|.+.
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 3445555567899999999999998763 33 4899998765 456678899999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhcccc---cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEE
Q 003046 595 GRSVLVYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 671 (854)
Q Consensus 595 ~~~~lV~e~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~ 671 (854)
+..++++|||++|+|..||++.. .....+.....+.++.|||+|+.||+++ ++|||||.++|+||+....|||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 99999999999999999997542 1245688889999999999999999999 99999999999999999999999
Q ss_pred EecccccccCCCcceeecc-cccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003046 672 DFGLSKFAVDGASHVSSIV-RGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 672 DFGla~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|||+|+.+.+......... .-...|||||.+..+.++.|+|||||||+|||++| |..||...+..+ +.. ..
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~----v~~---~~ 917 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE----VLL---DV 917 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----HHH---HH
Confidence 9999995554443333222 23579999999999999999999999999999999 899998765211 111 12
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.+.|++ +.+..+..++.+|+..||+.+|++||++..|+++++.+....
T Consensus 918 ~~ggRL----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 918 LEGGRL----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HhCCcc----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 233322 223445567889999999999999999999999999887653
No 25
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=344.27 Aligned_cols=266 Identities=20% Similarity=0.249 Sum_probs=204.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcC-CCceeeEeeeeeecC-eEEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEG-RSVLV 600 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~-~~~lV 600 (854)
..+|.+.++||.|.||.||+|+-+ +|+.||||.++..- ...+..=.+|+..|+++. ||||+++.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 346778899999999999999865 68999999987553 233334468999999998 999999999998888 89999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
||||+ .+|.+++.++ ++.+++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||...
T Consensus 89 fE~Md-~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred HHhhh-hhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 99996 4899998654 66789999999999999999999999 99999999999999999999999999999765
Q ss_pred CCCcceeecccccccccCccccc-cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC-----
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYI-SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD----- 754 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~----- 754 (854)
.... .+..+.|.+|+|||++. .+-|+.+.|||++|||++|+.+-++.|.+.+.-+..-.+.+-.....++.+
T Consensus 162 SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 162 SKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 4433 23445799999999986 577899999999999999999999999876521111112211111000000
Q ss_pred cccccCCcc---c----CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSL---L----DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l---~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+...+.=++ . ...-.....+.++++.+|+++||.+|||+.|.++|
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 000111000 0 00111245678899999999999999999999987
No 26
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-39 Score=344.26 Aligned_cols=239 Identities=30% Similarity=0.456 Sum_probs=199.4
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKE 611 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~ 611 (854)
+-||+|+.|.||+|+++ ++.||||+++.- -+.+|+-|++|+||||+.|.|+|.....+|+|||||..|-|.+
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 34899999999999998 799999987522 2457888999999999999999999999999999999999999
Q ss_pred hhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeeccc
Q 003046 612 HLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVR 691 (854)
Q Consensus 612 ~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 691 (854)
.|+ .++.+.......+..+||.|+.|||.+ .|||||||.-||||..+..|||+|||.++...+. ...-.++
T Consensus 202 VLk----a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFa 272 (904)
T KOG4721|consen 202 VLK----AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFA 272 (904)
T ss_pred HHh----ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhh
Confidence 994 456677777888999999999999998 9999999999999999999999999999865543 2333467
Q ss_pred ccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHH
Q 003046 692 GTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQS 771 (854)
Q Consensus 692 gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~ 771 (854)
||..|||||++...+.++|+|||||||||||||||..||.+..... | =|- +=.-.|.-..+..+
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----I-IwG-----------VGsNsL~LpvPstc 336 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----I-IWG-----------VGSNSLHLPVPSTC 336 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----e-EEe-----------ccCCcccccCcccC
Confidence 9999999999999999999999999999999999999996544111 1 110 00111222234456
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 772 MWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 772 ~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..-+.-|+++||+..|..||++++++.||+-.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 66788999999999999999999999999854
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-38 Score=347.14 Aligned_cols=248 Identities=25% Similarity=0.432 Sum_probs=203.6
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC----Cc-cchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN----SY-QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~----~~-~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~l 599 (854)
.|.+.+.||+|.||+|+.|.+. ++..||||++... .. .....+.+|+.++++++ ||||+++++++......++
T Consensus 18 ~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~i 97 (370)
T KOG0583|consen 18 KYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYI 97 (370)
T ss_pred ceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEE
Confidence 4556789999999999999765 6899999977653 11 23456678999999998 9999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEeccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKF 678 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~ 678 (854)
||||+.+|+|.+++. ...++.+..+..++.|++.|++|||+. +|+||||||+|||++.+ +++||+|||++..
T Consensus 98 vmEy~~gGdL~~~i~----~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 98 VMEYCSGGDLFDYIV----NKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEecCCccHHHHHH----HcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 999999999999994 356788899999999999999999998 99999999999999999 9999999999987
Q ss_pred ccCCCcceeecccccccccCccccccCc-CC-CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQ-LT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
.. .........+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||++..... +.. .+..+...
T Consensus 171 ~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~----l~~----ki~~~~~~ 241 (370)
T KOG0583|consen 171 SP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN----LYR----KIRKGEFK 241 (370)
T ss_pred cC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH----HHH----HHhcCCcc
Confidence 64 3334556678999999999999977 86 68999999999999999999998754221 111 12222110
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+ ..... ...+..++.+|+..+|.+|+++.+|+++
T Consensus 242 --~----p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 242 --I----PSYLL---SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred --C----CCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 0 01110 4467899999999999999999999944
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=335.37 Aligned_cols=246 Identities=22% Similarity=0.306 Sum_probs=198.2
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccc---hhchHHHHHHhhhcCCCceeeEeeeeee----cCeEEEEEEec
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG---KREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVYEFM 604 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~---~~~~~~E~~~l~~l~HpnIv~l~g~~~~----~~~~~lV~e~~ 604 (854)
..||+|++|.||+|.+. |+.||||+++...... .+.+.+|+.+|++++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 46999999999999984 8999999987653332 3567899999999999999999999876 34679999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++.....++.+++.||.|||+.. +++||||||+|||+++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 105 TRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 99999999853 456889999999999999999999742 77899999999999999999999999997553321
Q ss_pred ceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 685 HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... .+... ....+. . ..
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~----~~~~~---i~~~~~-~----~~ 242 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK----EIYDL---IINKNN-S----LK 242 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH----HHHHH---HHhcCC-C----CC
Confidence 22358899999999976 68999999999999999999999999765421 12111 111111 0 01
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+++.+|++.||++|||+.||++.|+...
T Consensus 243 ----~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 243 ----LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ----CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 11123346889999999999999999999999998753
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-39 Score=354.34 Aligned_cols=256 Identities=29% Similarity=0.438 Sum_probs=206.2
Q ss_pred HhhccccccCcEEEEEEEECC--C--cE-EEEEEEecC---CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLKD--G--KE-IAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~--~--~~-vAvK~l~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
.+.++||+|+||.||+|+++. + .. ||||..+.. ......+|.+|+++|++++|||||+++|++..+..+++|
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 356899999999999998763 2 23 899998753 245567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
||+|.||+|.++|... ...++..++..++.++|.||+|||++ +++||||.++|+|++.++.+||+|||+++...
T Consensus 240 mEl~~gGsL~~~L~k~---~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKN---KKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred EEecCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 9999999999999643 23689999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.-. .......-+..|+|||.+..+.++.++|||||||++||+++ |..||.+.... .+..++. .++.
T Consensus 314 ~~~-~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~v~~kI~---~~~~----- 380 (474)
T KOG0194|consen 314 QYV-MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----EVKAKIV---KNGY----- 380 (474)
T ss_pred cee-eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH----HHHHHHH---hcCc-----
Confidence 111 11112235789999999999999999999999999999999 89999876622 2222221 1111
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
+...+......+..+..+|+..+|++||+|.+|.+.|+.+....
T Consensus 381 ----r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 381 ----RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred ----cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 11112233445677788999999999999999999999876543
No 30
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-37 Score=339.41 Aligned_cols=263 Identities=25% Similarity=0.392 Sum_probs=201.5
Q ss_pred HHHHhhccccccCcEEEEEEEECC-----------------CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKD-----------------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQF 587 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~-----------------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l 587 (854)
..+.+.++||+|+||.||+|.+++ +..||+|++.... .....++.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 345567899999999999997642 3369999987543 2234578999999999999999999
Q ss_pred eeeeeecCeEEEEEEecCCCCHHHhhcccc---------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceec
Q 003046 588 LGYCQEEGRSVLVYEFMHNGTLKEHLYGTL---------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIH 652 (854)
Q Consensus 588 ~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~---------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 652 (854)
++++...+..++||||+++|+|.+++.... .....+++..+..++.|++.||.|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 999999999999999999999999885421 1123478888999999999999999998 9999
Q ss_pred cCCCCCCeEEcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh--CCcc
Q 003046 653 RDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS--GQEA 729 (854)
Q Consensus 653 rDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt--G~~p 729 (854)
|||||+|||++.++.+||+|||+++........ ......++..|+|||++..+.++.++|||||||++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999755433221 1223346789999999998899999999999999999987 5567
Q ss_pred cccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 730 ISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 730 f~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
|...... .+...+........... . ...+......+.+++.+|++.+|++||||.||.+.|+
T Consensus 242 ~~~~~~~----~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDE----QVIENAGEFFRDQGRQV-Y-----LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHH----HHHHHHHHHhhhccccc-c-----ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7654321 22222222221111000 0 0011122346889999999999999999999999886
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.2e-38 Score=339.12 Aligned_cols=245 Identities=27% Similarity=0.377 Sum_probs=207.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|.||+||||+-+ +.+.||+|.+.+... ...+.+.+|++++++++||||+.++++|+...+.++|.||+
T Consensus 4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a 83 (808)
T KOG0597|consen 4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYA 83 (808)
T ss_pred hhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhh
Confidence 445678999999999999866 678999999875432 23456889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
.| +|..+| .....+++..+..|+.++..||.|||+. +|+|||+||.|||++..+.+|+||||+|+.+.. .+
T Consensus 84 ~g-~L~~il----~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t 154 (808)
T KOG0597|consen 84 VG-DLFTIL----EQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NT 154 (808)
T ss_pred hh-hHHHHH----HhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-Cc
Confidence 87 999998 4567899999999999999999999999 999999999999999999999999999997654 34
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
...+.+.|||-|||||+..+..|+..+|+||+|||+||+++|++||-... +.+-++....+.-
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-------i~~Lv~~I~~d~v---------- 217 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-------ITQLVKSILKDPV---------- 217 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-------HHHHHHHHhcCCC----------
Confidence 55567789999999999999999999999999999999999999996543 3333333222211
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+..++...+..||.+|.+-.+++.|
T Consensus 218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1122344568889999999999999999999877
No 32
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=9.6e-38 Score=334.17 Aligned_cols=256 Identities=22% Similarity=0.342 Sum_probs=203.5
Q ss_pred HHHHHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
...+.+.+.||+|+||.||+|.++ .+..||+|+++.... .....+.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 345567889999999999999764 356899999876532 334568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +++||||||+|||++.++.+|++|||.+...
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 84 VTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999998532 34688999999999999999999998 9999999999999999999999999987643
Q ss_pred cCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
............++..|+|||.+.+..++.++|||||||++||+++ |+.||...... .+... +.++...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~----~~~~~----~~~~~~~-- 227 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ----DVIKA----VEDGFRL-- 227 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----HHHHH----HHCCCCC--
Confidence 2222111222335678999999999999999999999999999775 99999765421 12221 1222110
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..+......+.+++..|++.+|++||++.||.+.|+++
T Consensus 228 -------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 -------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01112334688999999999999999999999998764
No 33
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-37 Score=349.54 Aligned_cols=260 Identities=25% Similarity=0.408 Sum_probs=202.7
Q ss_pred HHHHHhhccccccCcEEEEEEEE------CCCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCe
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~ 596 (854)
...+.+.+.||+|+||.||+|++ .++..||||+++... ......+.+|++++..+ +||||++++++|...+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 44566789999999999999974 235689999987543 23345688999999999 89999999999999999
Q ss_pred EEEEEEecCCCCHHHhhccccc----------------------------------------------------------
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLT---------------------------------------------------------- 618 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~---------------------------------------------------------- 618 (854)
.++||||+++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999854210
Q ss_pred -------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 619 -------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 619 -------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 112478889999999999999999998 9999999999999999999999999999755432221
Q ss_pred e-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 686 V-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 686 ~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. .....++..|+|||.+.+..++.++|||||||++|||++ |..||...... ..+..+. ..+... ..+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~---~~~~~~~----~~~~~~--~~~-- 339 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD---SKFYKMI----KEGYRM--LSP-- 339 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch---HHHHHHH----HhCccC--CCC--
Confidence 1 122335678999999999999999999999999999998 88888654311 1122221 111100 001
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
. ....++.+++.+|++.+|++||+|.||++.|++.
T Consensus 340 --~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 --E---CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --C---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0 1123578999999999999999999999999864
No 34
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-37 Score=342.34 Aligned_cols=245 Identities=25% Similarity=0.387 Sum_probs=207.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+++.||.|+.|.|..|++. +|+.+|||++.+... .....+++|+.+|+.+.||||+++++++.+..++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 346788999999999999876 799999999976522 2245688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|-|.+++. ..+.+.+.++.+++.||..|+.|+|.. +|+|||+||+|+|||..+++||+|||+|.+..++
T Consensus 94 v~gGELFdylv----~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g- 165 (786)
T KOG0588|consen 94 VPGGELFDYLV----RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPG- 165 (786)
T ss_pred cCCchhHHHHH----hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCC-
Confidence 99999999983 567789999999999999999999998 9999999999999999999999999999765433
Q ss_pred cceeecccccccccCccccccCcCC-CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
..-.+.+|.+.|.|||++.+.+|. .++||||+|||||.||||+.||++.+ .+.+. .+++.|.++.
T Consensus 166 -klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN----ir~LL----lKV~~G~f~M----- 231 (786)
T KOG0588|consen 166 -KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN----IRVLL----LKVQRGVFEM----- 231 (786)
T ss_pred -ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc----HHHHH----HHHHcCcccC-----
Confidence 344567899999999999999986 58999999999999999999998655 22332 2344443321
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.....++.+|+.+|+..||+.|.|++||.+|
T Consensus 232 -----Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 232 -----PSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -----CCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 12223457789999999999999999999998
No 35
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-38 Score=308.53 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=213.9
Q ss_pred ccccCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeee
Q 003046 515 AHCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGY 590 (854)
Q Consensus 515 ~~~~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~ 590 (854)
...+++.+++ +++.||+|.||.||.|+.+ ++-.||+|++.+.. .+..+++.+|+++-+.++||||++++++
T Consensus 16 ~~~~~l~dfe-----igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~ 90 (281)
T KOG0580|consen 16 TKTWTLDDFE-----IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY 90 (281)
T ss_pred ccccchhhcc-----ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh
Confidence 3456666654 6889999999999999877 56789999997653 3446789999999999999999999999
Q ss_pred eeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEE
Q 003046 591 CQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 591 ~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL 670 (854)
|.++.+.||++||..+|.+...|.+. ...++++.....++.|+|.||.|+|.+ +|+||||||+|+|++.++..||
T Consensus 91 fhd~~riyLilEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lki 165 (281)
T KOG0580|consen 91 FHDSKRIYLILEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKI 165 (281)
T ss_pred eeccceeEEEEEecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeec
Confidence 99999999999999999999999643 355678888889999999999999998 9999999999999999999999
Q ss_pred EEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 671 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
+|||.+.... .....+.+||..|.+||+..+..++..+|+|++|++.||++.|.+||+....++.++.+..
T Consensus 166 AdfGwsV~~p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k------ 236 (281)
T KOG0580|consen 166 ADFGWSVHAP---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK------ 236 (281)
T ss_pred cCCCceeecC---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH------
Confidence 9999986443 3445667899999999999999999999999999999999999999987664444433332
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.++.+| ......+.+++..|+..+|.+|.+..||++|-
T Consensus 237 -----~~~~~p-------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 237 -----VDLKFP-------STISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred -----ccccCC-------cccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 111222 22234578999999999999999999999873
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-37 Score=333.59 Aligned_cols=249 Identities=26% Similarity=0.373 Sum_probs=198.7
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++|+||+++++++...+..++||||++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecC
Confidence 4578999999999999875 689999999875422 223457789999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 84 GGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred CCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 99999887532 234588999999999999999999998 99999999999999999999999999997653322
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......||..|+|||++.+..++.++|||||||++|||++|+.||...........+. ....... .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~----~~~~~~~----------~ 222 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD----RRVKEDQ----------E 222 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHH----HHhhccc----------c
Confidence 2233468999999999999999999999999999999999999997654211111111 1111110 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
.+.......+.+++.+|++.+|++||+ ++++++|
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 111122345788999999999999997 8888875
No 37
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.9e-38 Score=327.10 Aligned_cols=256 Identities=27% Similarity=0.368 Sum_probs=199.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecC-----eEEEEEEec
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-----RSVLVYEFM 604 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-----~~~lV~e~~ 604 (854)
.+++|+|+||.||+|.+. +++.||||+.-.+ .+.-..|+++|+++.|||||+|+-+|.... ...+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 478999999999999876 4789999987543 334457999999999999999999885432 346899999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEecccccccCCC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~~~~~ 683 (854)
+. +|.+.++.....+++++...+.-+..||.+||+|||+. +|+||||||+|+|+|.+ |.+||||||.|+....+.
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 75 89999876555567788888889999999999999997 99999999999999977 999999999999888777
Q ss_pred cceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh--c-------C
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE--S-------G 753 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~--~-------~ 753 (854)
...+.. -|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++.|.+.+.. .+++..++..-. . .
T Consensus 181 pniSYi--cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~---dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 181 PNISYI--CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV---DQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred CceeEE--EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH---HHHHHHHHHhCCCCHHHHhhcCc
Confidence 666655 4889999999987 57999999999999999999999999876522 223332221100 0 0
Q ss_pred CcccccCCcccCc-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDE-----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.-.+.+... +........++++.++++.+|.+|.++.|++.|
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0011111222111 222334568899999999999999999999876
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3e-37 Score=334.63 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=206.8
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+...||+|+||.||+|+-+ +|+.+|+|++++.... .......|-.+|....+|.||+|+..|.+.+.+||||||++
T Consensus 145 ~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylP 224 (550)
T KOG0605|consen 145 LLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLP 224 (550)
T ss_pred hheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecC
Confidence 4578999999999999866 6899999999876433 34456789999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC----
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD---- 681 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~---- 681 (854)
||++..+|. ....|++..+..++.+++.|++-||+. |+|||||||+|+|||..|++||+||||+.-+..
T Consensus 225 GGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~ 297 (550)
T KOG0605|consen 225 GGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRI 297 (550)
T ss_pred CccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhhhh
Confidence 999999983 456788889999999999999999998 999999999999999999999999999842110
Q ss_pred ------------------CCcc-----e-------------------eecccccccccCccccccCcCCCcchhhhHHHH
Q 003046 682 ------------------GASH-----V-------------------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVI 719 (854)
Q Consensus 682 ------------------~~~~-----~-------------------~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvv 719 (854)
.... . ....+|||.|||||++.+..|+..+|.||+|||
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~I 377 (550)
T KOG0605|consen 298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCI 377 (550)
T ss_pred hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHH
Confidence 0000 0 112349999999999999999999999999999
Q ss_pred HHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCC---HHHH
Q 003046 720 LLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS---ISEV 796 (854)
Q Consensus 720 l~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs---m~eV 796 (854)
+||||.|.+||...+..+.++.|+.|........+. ....+..+||.+|+. ||++|-. +.||
T Consensus 378 myEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~--------------~~s~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 378 MYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEV--------------DLSDEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcC--------------cccHHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 999999999999999888999999996544222111 111467799999999 9999985 6666
Q ss_pred HHH
Q 003046 797 LKD 799 (854)
Q Consensus 797 ~~~ 799 (854)
.+|
T Consensus 443 K~H 445 (550)
T KOG0605|consen 443 KKH 445 (550)
T ss_pred hcC
Confidence 655
No 39
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=337.43 Aligned_cols=271 Identities=25% Similarity=0.381 Sum_probs=220.7
Q ss_pred cCHHHHHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCe
Q 003046 518 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 518 ~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~ 596 (854)
-.+.|+.+....|.++||+|.||.|..+....+..||||+++..... ..++|.+|+++|.+++||||+.++|+|..++.
T Consensus 530 ~al~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP 609 (807)
T KOG1094|consen 530 PALVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP 609 (807)
T ss_pred cchhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc
Confidence 34567777777789999999999999999987899999999987544 45899999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
+++|+|||++|+|.+|+...... .+.-....+|+.|||.||+||.+. .+|||||.++|||++.++++||+|||++
T Consensus 610 icmI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 99999999999999999654222 244556678999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcceee-cccccccccCccccccCcCCCcchhhhHHHHHHHHHh--CCcccccccccccccchHHHHHHhhhcC
Q 003046 677 KFAVDGASHVSS-IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS--GQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 677 ~~~~~~~~~~~~-~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt--G~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
+.+..+..+... ...-+.+|||||.+.-++++.++|||+||+.+||+++ ...||+.... +++++-.......+
T Consensus 685 R~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~----e~vven~~~~~~~~ 760 (807)
T KOG1094|consen 685 RNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD----EQVVENAGEFFRDQ 760 (807)
T ss_pred cccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH----HHHHHhhhhhcCCC
Confidence 976666555433 3345789999999999999999999999999999876 6788876552 23333222222222
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.... ....+.-+..++.+++.+|+..+-++||+++++..+|++.
T Consensus 761 ~~~~------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 761 GRQV------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred Ccce------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111 1122344556788999999999999999999999999864
No 40
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3e-37 Score=346.80 Aligned_cols=262 Identities=26% Similarity=0.410 Sum_probs=203.3
Q ss_pred HHHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecC
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 595 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~ 595 (854)
....+.+.+.||+|+||.||+|+.. +++.||||+++... ......+.+|+++++.+ +|+||++++++|...+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3445667899999999999999752 34579999997543 22345688999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhcccc----------------------------------------------------------
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTL---------------------------------------------------------- 617 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~---------------------------------------------------------- 617 (854)
..++||||+++|+|.++++...
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999885321
Q ss_pred --------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc-eee
Q 003046 618 --------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH-VSS 688 (854)
Q Consensus 618 --------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~ 688 (854)
.....+++..+++++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........ ...
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 0113478888999999999999999998 9999999999999999999999999999755433221 112
Q ss_pred cccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 689 IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 689 ~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
...++..|+|||++.+..++.++|||||||++|||++ |+.||....... .+.. ....+. .+.....
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~---~~~~----~~~~~~-----~~~~~~~- 339 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS---KFYK----MVKRGY-----QMSRPDF- 339 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH---HHHH----HHHccc-----CccCCCC-
Confidence 2335678999999998999999999999999999997 999997543211 1111 111110 0000011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
....+.+++.+|++.+|++||++.+|++.|++++
T Consensus 340 ---~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 340 ---APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1245789999999999999999999999999864
No 41
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.2e-37 Score=327.90 Aligned_cols=255 Identities=25% Similarity=0.439 Sum_probs=205.7
Q ss_pred HHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
...+.+.+.||+|+||.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 34566778999999999999998888899999987543 33567889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 84 KYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 9999999986432 45688999999999999999999998 999999999999999999999999999986653322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
........+..|+|||++.+..++.++||||||+++|||++ |+.||...... .+.. .+.....
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~----~~~~~~~-------- 222 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA----EVLQ----QVDQGYR-------- 222 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHH----HHHcCCC--------
Confidence 21222223468999999999999999999999999999999 99998654311 1111 1111100
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..........+.+++.+|++.+|++||++.++++.|++
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 -MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 00111223468899999999999999999999999985
No 42
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-36 Score=329.34 Aligned_cols=265 Identities=21% Similarity=0.252 Sum_probs=200.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+.+.||+|+||.||+|+.+ +++.||||++.... ......+.+|++++++++||||+++++++..++..++||||+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV 82 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence 445688999999999999987 57889999987542 223456788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+++.+..+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 83 EKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred CCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 9887765442 234578888999999999999999998 999999999999999999999999999986544333
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH--------HHHHhhhcCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ--------WAKLHIESGDIQ 756 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~--------~~~~~~~~~~~~ 756 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. +...........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 333345689999999999988899999999999999999999999976442111111111 000001111111
Q ss_pred cccCCcccCc------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDE------YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+..... ........+.+++.+|++.+|++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 1111111000 001123458899999999999999999999875
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3e-37 Score=340.12 Aligned_cols=242 Identities=24% Similarity=0.328 Sum_probs=196.1
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||+++.+ +|+.||||+++... ......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999875 68899999997542 222345778999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~ 152 (323)
T cd05571 81 ELFFHLS----RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccc
Confidence 9998884 345688999999999999999999998 99999999999999999999999999987432221 222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..+.. .+..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~----~~~~~~------~~p~-- 216 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFEL----ILMEEI------RFPR-- 216 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH----HHHHH----HHcCCC------CCCC--
Confidence 3456999999999999999999999999999999999999999754311 11111 111110 1111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.....+.+++.+|++.||++|| ++.++++|
T Consensus 217 --~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 217 --TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred --CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1234578899999999999999 89999876
No 44
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.2e-37 Score=340.46 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=201.4
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|+.. +++.||||+++... ......+..|++++..++||||+++++++...+..++||||+
T Consensus 4 ~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (333)
T cd05600 4 QILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYV 83 (333)
T ss_pred EEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCC
Confidence 45688999999999999987 58899999997542 223456788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 84 PGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred CCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 99999999842 34678889999999999999999998 999999999999999999999999999975433
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+..|... +.....
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----------~~~~~~ 222 (333)
T cd05600 154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET----------LQRPVY 222 (333)
T ss_pred -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc----------ccCCCC
Confidence 223456899999999999999999999999999999999999999765432222222222110 000000
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..........+.+++.+|+..+|++||++.|+++|
T Consensus 223 ~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 223 DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00001223457789999999999999999999987
No 45
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8e-37 Score=324.79 Aligned_cols=249 Identities=30% Similarity=0.510 Sum_probs=201.1
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+++++++..+|+|.+.... ....++.+|++++++++||||+++++++...+..++||||+++|
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENG 84 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCC
Confidence 34567899999999999999888899999876432 33567889999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 85 ~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 85 CLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred cHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 999988642 23588999999999999999999998 999999999999999999999999999876543322222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .+..... .+.. ...+..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~----~~~~~i~----~~~~--~~~~~~--- 225 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY----EVVEMIS----RGFR--LYRPKL--- 225 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHH----CCCC--CCCCCC---
Confidence 23345678999999998889999999999999999999 89999754421 2222211 1110 011111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
....+.+++.+|++.+|++||+|.++++.|
T Consensus 226 ----~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ----ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ----CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 123578999999999999999999999876
No 46
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.3e-37 Score=326.43 Aligned_cols=254 Identities=24% Similarity=0.437 Sum_probs=204.8
Q ss_pred HHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.+.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++.+...+..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 3445678999999999999998888899999876433 235678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 85 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 85 KGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 99999998643 244678888999999999999999998 9999999999999999999999999999865443222
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......++..|+|||++....++.++|||||||++|||++ |+.||...... .+..+. ..+... + ..
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~~~----~~~~~~----~-~~ 226 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS----DVMSAL----QRGYRM----P-RM 226 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH----HHHHHH----HcCCCC----C-CC
Confidence 2223346778999999998889999999999999999998 99999654311 122221 111100 0 01
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
.. ....+.+++.+|++.+|++||+++++.+.|++
T Consensus 227 ~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 227 EN----CPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CC----CCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11 22457899999999999999999999999985
No 47
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=9.3e-37 Score=324.97 Aligned_cols=254 Identities=27% Similarity=0.446 Sum_probs=208.9
Q ss_pred HHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.+.++||+|+||.||+|...+++.+|+|++.........++..|+++++.++|+||+++++++...+..++||||++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence 45667899999999999999998899999999987655556778999999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+.........
T Consensus 86 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 86 KGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 99999999653 245688999999999999999999998 9999999999999999999999999999765433221
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....++..|+|||.+....++.++||||||+++++|++ |+.||..... ........ .....
T Consensus 161 -~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~----~~~~~~~~---~~~~~--------- 223 (261)
T cd05148 161 -SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN----HEVYDQIT---AGYRM--------- 223 (261)
T ss_pred -ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH----HHHHHHHH---hCCcC---------
Confidence 223346778999999998899999999999999999998 8999975441 12222211 11000
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..+......+.+++.+|++.+|++|||+.++++.|+.
T Consensus 224 -~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 -PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 1111223457899999999999999999999999985
No 48
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.2e-37 Score=326.21 Aligned_cols=253 Identities=29% Similarity=0.441 Sum_probs=203.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|..+ .++.||+|++.... ....++.+|++++++++||||+++++++..++..++||||+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 86 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCC
Confidence 445688999999999999876 58889999987442 3346788999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ....+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.........
T Consensus 87 ~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 87 GNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred CcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 9999998542 234588999999999999999999998 99999999999999999999999999997654432222
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||...... .+.. ....+. ..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~----~~~~~~---------~~ 224 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYE----LLEKGY---------RM 224 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHH----HHHCCC---------CC
Confidence 222334678999999999999999999999999999998 99998754321 1111 111110 00
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..+......+.+++.+|++.+|++||++.++++.|+.+
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11112234688999999999999999999999999875
No 49
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-37 Score=309.44 Aligned_cols=239 Identities=26% Similarity=0.371 Sum_probs=197.1
Q ss_pred cCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeee
Q 003046 518 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQE 593 (854)
Q Consensus 518 ~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~ 593 (854)
.++.|++ +.+.||.|+||+|.+++.+ +|..+|+|++.+...- ..+...+|..+|+.+.||+++++++.|.+
T Consensus 41 ~~l~dfe-----~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d 115 (355)
T KOG0616|consen 41 YSLQDFE-----RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD 115 (355)
T ss_pred cchhhhh-----heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence 4555543 4678999999999999987 5788999999865432 23456789999999999999999999999
Q ss_pred cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 594 EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 594 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
.+.+++||||++||.|..+++ +.+++++..+.-++.||+.||+|||+. .|++||+||+|||+|.+|.+||+||
T Consensus 116 ~~~lymvmeyv~GGElFS~Lr----k~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSYLR----KSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred CCeEEEEEeccCCccHHHHHH----hcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 999999999999999999995 457899999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC
Q 003046 674 GLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 674 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
|.|+.... ...+.+|||.|+|||.+++..+..++|.|||||++|||+.|..||...+.-..++.|+ ++
T Consensus 189 GFAK~v~~----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~--------~~ 256 (355)
T KOG0616|consen 189 GFAKRVSG----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKIL--------EG 256 (355)
T ss_pred cceEEecC----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHH--------hC
Confidence 99987643 2556789999999999999999999999999999999999999998766322221221 12
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCC
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR 790 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R 790 (854)
++ .++.-....+.+|+...++.|-.+|
T Consensus 257 ~v----------~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KV----------KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cc----------cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 11 1122222346677788888887777
No 50
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-38 Score=330.90 Aligned_cols=244 Identities=25% Similarity=0.388 Sum_probs=202.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.+.||+|.||.||+|... .++.||+|++.-... ....++.+|+.+|..++++||.+++|.+..+..++++||||.+|+
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGs 97 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGS 97 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcc
Confidence 478999999999999865 688999999976543 335678899999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceee
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSS 688 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 688 (854)
+.+.|. .+..+++....-|+.+++.||.|||.+ +.+|||||+.|||+..+|.+||+|||.+-......... .
T Consensus 98 v~~lL~----~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-~ 169 (467)
T KOG0201|consen 98 VLDLLK----SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-K 169 (467)
T ss_pred hhhhhc----cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhcc-c
Confidence 999984 233446667777899999999999999 99999999999999999999999999997655443333 6
Q ss_pred cccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCC
Q 003046 689 IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYD 768 (854)
Q Consensus 689 ~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~ 768 (854)
+..||+.|||||++....|+.|+||||||+..+||.+|.+|+.....-... .+ +..-.-|.+.+.+
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl-fl------------Ipk~~PP~L~~~~- 235 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL-FL------------IPKSAPPRLDGDF- 235 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE-Ee------------ccCCCCCcccccc-
Confidence 677999999999999889999999999999999999999999776521110 00 1111223344433
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 769 IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 769 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.+++..|+..+|+.||++.++++|
T Consensus 236 ---S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 236 ---SPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ---CHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 3457889999999999999999999876
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9.7e-37 Score=334.44 Aligned_cols=240 Identities=23% Similarity=0.320 Sum_probs=193.5
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999876 57899999987532 22345677899999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 152 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT 152 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence 998853 44688899999999999999999998 99999999999999999999999999997543222 22334
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ +.. .+ +.
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-------~~~~~~~~-~~~------~~----~~ 214 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-------EMYRKILQ-EPL------RF----PD 214 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-------HHHHHHHc-CCC------CC----CC
Confidence 56999999999999999999999999999999999999999754421 11111111 110 01 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPS---ISEVLKD 799 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPs---m~eV~~~ 799 (854)
.....+.+++.+|++.+|++||+ +.|++.|
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 12245778999999999999985 5666655
No 52
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.5e-36 Score=326.77 Aligned_cols=257 Identities=26% Similarity=0.475 Sum_probs=205.8
Q ss_pred HHHHHhhccccccCcEEEEEEEECC------CcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 597 (854)
...+.+.+.||+|+||.||+|...+ ++.||||+++..... ....+.+|++++++++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3456678899999999999998743 478999998765433 456889999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhcccc----------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc
Q 003046 598 VLVYEFMHNGTLKEHLYGTL----------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 667 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 667 (854)
++||||+++++|.+++.... .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 99999999999999996431 2234578899999999999999999998 9999999999999999999
Q ss_pred EEEEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHH
Q 003046 668 AKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQW 745 (854)
Q Consensus 668 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~ 745 (854)
+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||...... .+...
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~----~~~~~ 236 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE----EVIEC 236 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHH
Confidence 99999999875432221 11223345788999999999999999999999999999998 99998654421 22222
Q ss_pred HHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 746 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 746 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.. .+.... .+......+.+++.+|++.+|++||++.||++.|+
T Consensus 237 ~~----~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 IT----QGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HH----cCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11 221111 11122346889999999999999999999999886
No 53
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.2e-37 Score=333.13 Aligned_cols=243 Identities=23% Similarity=0.323 Sum_probs=197.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 82 (291)
T cd05612 3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY 82 (291)
T ss_pred ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeC
Confidence 345688999999999999876 68899999986432 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 83 VPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999843 34688888999999999999999998 9999999999999999999999999999765332
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +.+ . +..+.. .+
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~----~~~---~-i~~~~~------~~ 217 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG----IYE---K-ILAGKL------EF 217 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHH---H-HHhCCc------CC
Confidence 123458999999999999889999999999999999999999997644211 111 1 111111 01
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
... ....+.+++.+|++.||.+||+ +.|+++|
T Consensus 218 ~~~----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 218 PRH----LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred Ccc----CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 111 1235789999999999999995 8888877
No 54
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.6e-37 Score=328.54 Aligned_cols=248 Identities=33% Similarity=0.538 Sum_probs=193.2
Q ss_pred hccccccCcEEEEEEEEC-----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 531 EKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.||.|.||.||+|.+. .+..|+||+++... ......+.+|++.+++++||||++++|+|...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 578999999999999887 35789999996543 234678999999999999999999999999888899999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.++|... ....+++..+..|+.|+++||+|||+. +++|+||+++||+++.++.+||+|||+++.......
T Consensus 84 ~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 999999999654 245689999999999999999999998 999999999999999999999999999976532222
Q ss_pred -ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 685 -HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 685 -~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......+...|+|||.+....++.++||||||+++|||++ |+.||..... ..+...+ .++....
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~----~~~~~~~----~~~~~~~----- 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN----EEIIEKL----KQGQRLP----- 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH----HHHHHHH----HTTEETT-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccc----cccccce-----
Confidence 22233457789999999999999999999999999999999 7888865431 1222221 2221111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.+......+.+++.+|++.+|++||+|.+|++.|
T Consensus 226 ----~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ----IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111234578999999999999999999999876
No 55
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.4e-36 Score=327.79 Aligned_cols=255 Identities=28% Similarity=0.474 Sum_probs=203.5
Q ss_pred HHhhccccccCcEEEEEEEECC------CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
+.+.+.||+|+||.||+|.... ...||+|.+.... ......+.+|++++++++||||+++++++...+..+++
T Consensus 7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 86 (283)
T cd05048 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCML 86 (283)
T ss_pred cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEE
Confidence 3467889999999999998653 2579999986443 23345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcE
Q 003046 601 YEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 668 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~ 668 (854)
|||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCCcE
Confidence 999999999999864321 114578889999999999999999998 99999999999999999999
Q ss_pred EEEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHH
Q 003046 669 KVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWA 746 (854)
Q Consensus 669 kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~ 746 (854)
||+|||+++....... .......+++.|+|||++....++.++|||||||++|||++ |..||.+.... .+...
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~----~~~~~- 238 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ----EVIEM- 238 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH-
Confidence 9999999975533222 12233446889999999998899999999999999999998 99998754421 22222
Q ss_pred HHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 747 KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 747 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
+..+.... .+.....++.+|+.+|++.+|++||++.||+++|+.
T Consensus 239 ---i~~~~~~~---------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 ---IRSRQLLP---------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHcCCcCC---------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 12221111 122234568899999999999999999999999975
No 56
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.6e-36 Score=325.68 Aligned_cols=248 Identities=24% Similarity=0.333 Sum_probs=197.1
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
||+|+||+||++... +++.||+|++...... ....+..|++++++++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999876 6889999998754222 234567899999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 988865444456789999999999999999999998 999999999999999999999999999975543322 2233
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.. ... .+. . ..+.
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~---~~~-~~~--------~--~~~~ 222 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ---RIL-NDS--------V--TYPD 222 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH---hhc-ccC--------C--CCcc
Confidence 4689999999999999999999999999999999999999975431111111111 110 010 0 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.....+.+++..|++.+|++|| +++++++|
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 2334578999999999999999 67777765
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-36 Score=333.67 Aligned_cols=261 Identities=23% Similarity=0.316 Sum_probs=200.5
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.+.||+|+||.||+++.. ++..||+|++.... ......+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (331)
T cd06649 6 DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85 (331)
T ss_pred cceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecC
Confidence 3455678999999999999887 57889999987542 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 86 DGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 99999999853 345788899999999999999999852 6999999999999999999999999998755332
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC---Cccc----
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG---DIQG---- 757 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~---~~~~---- 757 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+..........+ ....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK----ELEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHhcccccccccCCccccCcc
Confidence 223346899999999999999999999999999999999999999653311 1111110000000 0000
Q ss_pred ---------------------------ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 758 ---------------------------IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 758 ---------------------------~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
++...............+.+++.+|++.+|++|||+.|+++|-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000011234688999999999999999999999874
No 58
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-36 Score=351.38 Aligned_cols=252 Identities=22% Similarity=0.310 Sum_probs=203.3
Q ss_pred HHhhccccccCcEEEEEEEEC-C-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-D-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||.||+|... + ++.||+|.+..........+..|+.+++.++||||+++++++...+..++||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 556789999999999999765 3 57888887755544445567889999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc-
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS- 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~- 684 (854)
+|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999998876544455688889999999999999999998 999999999999999999999999999986543322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.......||++|+|||++.+..++.++|||||||++|||++|+.||...... .+.. ... .+....
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~----~~~~---~~~-~~~~~~------- 290 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR----EIMQ---QVL-YGKYDP------- 290 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH---HHH-hCCCCC-------
Confidence 2233456999999999999999999999999999999999999999754311 1111 111 111110
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+......+.+++.+|++.+|++||++.+++++
T Consensus 291 --~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 291 --FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred --CCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 111122457899999999999999999999754
No 59
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.2e-36 Score=335.47 Aligned_cols=242 Identities=24% Similarity=0.334 Sum_probs=195.0
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||+++.+ +|+.||+|+++... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999875 68999999997542 223345678999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 152 (323)
T cd05595 81 ELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccc
Confidence 9988874 344688999999999999999999998 99999999999999999999999999987532221 122
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... .. .... .+...
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~---~~-~~~~------~~p~~- 217 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFEL---IL-MEEI------RFPRT- 217 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH----HHHHH---Hh-cCCC------CCCCC-
Confidence 3356999999999999999999999999999999999999999754311 11111 00 0110 11111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
....+.+++.+|++.+|++|| ++.++++|
T Consensus 218 ---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 218 ---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred ---CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 224577999999999999998 89998876
No 60
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.3e-36 Score=323.19 Aligned_cols=254 Identities=26% Similarity=0.443 Sum_probs=203.5
Q ss_pred HHHhhccccccCcEEEEEEEECC----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|.++. ...||||+++... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 84 (266)
T cd05033 5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIIT 84 (266)
T ss_pred HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEE
Confidence 34567899999999999998752 4579999987543 233457889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++|+|||+++....
T Consensus 85 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 85 EYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999998542 23688999999999999999999998 999999999999999999999999999986642
Q ss_pred CCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |..||...... .+.... ..+...
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~----~~~~~~----~~~~~~--- 227 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ----DVIKAV----EDGYRL--- 227 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH----HHHHHH----HcCCCC---
Confidence 2222 2222345678999999999999999999999999999998 99998654311 122211 111100
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..+......+.+++.+|++.+|++||++.||+++|+++
T Consensus 228 ------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00112234678999999999999999999999999875
No 61
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.8e-36 Score=328.33 Aligned_cols=264 Identities=21% Similarity=0.286 Sum_probs=196.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.++||+|+||.||+|..+ +++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||++
T Consensus 7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 86 (288)
T cd07871 7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD 86 (288)
T ss_pred ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC
Confidence 455688999999999999876 68899999986543 2234467789999999999999999999999999999999997
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~- 158 (288)
T cd07871 87 S-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK- 158 (288)
T ss_pred c-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-
Confidence 5 898887432 33577888999999999999999998 999999999999999999999999999975433221
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh--------cCCcc
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE--------SGDIQ 756 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~--------~~~~~ 756 (854)
......|++.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+......... .....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence 2233458999999999875 56899999999999999999999999765422221111111000000 00001
Q ss_pred cccCCcccCcC----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEY----DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+...... .........+++.+|++.||.+|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11111110000 00112357799999999999999999999875
No 62
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=338.16 Aligned_cols=243 Identities=27% Similarity=0.368 Sum_probs=198.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.+ +++.||||++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 99 (329)
T PTZ00263 20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEF 99 (329)
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcC
Confidence 456789999999999999886 58899999987542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 100 VVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred CCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 999999998853 34678888889999999999999998 99999999999999999999999999997653321
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+. ..+..+.+. +
T Consensus 173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~----~~i~~~~~~------~ 234 (329)
T PTZ00263 173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF----RIY----EKILAGRLK------F 234 (329)
T ss_pred ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH----HHH----HHHhcCCcC------C
Confidence 2346999999999999999999999999999999999999999754311 111 111122110 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
.... ...+.+++.+|++.||++||+ ++++++|
T Consensus 235 p~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 235 PNWF----DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1111 234779999999999999996 7888876
No 63
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.8e-36 Score=320.70 Aligned_cols=249 Identities=28% Similarity=0.467 Sum_probs=200.0
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|.++++..+|+|++.... .....+.+|++++++++||||+++++++...+..++||||++++
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 45678999999999999998877889999986433 23456888999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++...+......
T Consensus 85 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 85 CLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence 999998532 23688999999999999999999998 999999999999999999999999999976543322222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .+... ...+. .. .
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~----~~~~~-----~~----~ 221 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS----EVVES----VSAGY-----RL----Y 221 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH----HHHHH----HHcCC-----cC----C
Confidence 22234568999999999999999999999999999999 89998654311 11111 11110 00 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.+.....++.+++.+|++.+|++||+|.||++.|
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1111334688999999999999999999999986
No 64
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.5e-36 Score=335.31 Aligned_cols=242 Identities=25% Similarity=0.362 Sum_probs=195.9
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||+++.+ +++.||||++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999876 68999999997542 223456778999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~ 152 (328)
T cd05593 81 ELFFHLS----RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATM 152 (328)
T ss_pred CHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccc
Confidence 9988884 344688999999999999999999998 99999999999999999999999999987532221 122
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. ... .+. ..+...
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~----~~~~---~~~-~~~------~~~p~~- 217 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFE---LIL-MED------IKFPRT- 217 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH----HHHH---Hhc-cCC------ccCCCC-
Confidence 3456999999999999999999999999999999999999999754311 1111 110 010 011111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
....+.+++.+|++.+|++|| ++.|+++|
T Consensus 218 ---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 ---LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ---CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 223577899999999999997 89999887
No 65
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.7e-36 Score=334.48 Aligned_cols=262 Identities=26% Similarity=0.410 Sum_probs=203.4
Q ss_pred HHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeee-cC
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQE-EG 595 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~-~~ 595 (854)
...+.+.+.||+|+||.||+|... +++.||+|+++.... .....+..|++++.++ +|+||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 446778899999999999999643 247899999874422 2235677899999999 89999999998865 45
Q ss_pred eEEEEEEecCCCCHHHhhccccc---------------------------------------------------------
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLT--------------------------------------------------------- 618 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~--------------------------------------------------------- 618 (854)
..++++||+++|+|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 68899999999999998853211
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce-eeccccccccc
Q 003046 619 HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV-SSIVRGTVGYL 697 (854)
Q Consensus 619 ~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~Y~ 697 (854)
....++|..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 013678999999999999999999998 99999999999999999999999999998654332222 22334677899
Q ss_pred CccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHH
Q 003046 698 DPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIE 776 (854)
Q Consensus 698 aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~ 776 (854)
|||++.+..++.++|||||||++|||++ |..||......+ .+ ...+..+... ..+......+.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~---~~----~~~~~~~~~~---------~~~~~~~~~~~ 306 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE---EF----CRRLKEGTRM---------RAPEYATPEIY 306 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH---HH----HHHHhccCCC---------CCCccCCHHHH
Confidence 9999999999999999999999999998 999986533111 11 1111111110 00112234688
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 777 EKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 777 ~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+++.+|++.+|++||++.||+++|+.++.
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998764
No 66
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-36 Score=314.33 Aligned_cols=249 Identities=22% Similarity=0.403 Sum_probs=211.8
Q ss_pred HHHHHHhhccccccCcEEEEEEEE-CCCcEEEEEEEecCCccchh---chHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKR---EFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~~~---~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+|.+.+.||+|.||.|-+|.. ..|+.||||.++++...++. .+.+|++||..++||||+.++.+|...+...+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 356778889999999999999975 67999999999887655544 46789999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||..+|.|.|++ ...+.|++.++..++.||..|+.|+|.+ +++|||||.+|||+|.++++||+|||++.++
T Consensus 131 vMEYaS~GeLYDYi----Ser~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 131 VMEYASGGELYDYI----SERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLY 203 (668)
T ss_pred EEEecCCccHHHHH----HHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhh
Confidence 99999999999999 4567899999999999999999999999 9999999999999999999999999999877
Q ss_pred cCCCcceeecccccccccCccccccCcCC-CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.+. ...++++|++-|.+||++.+.+|. ..+|-||+||+||-|+.|.-||++.+ ...++.. +..|...+
T Consensus 204 ~~~--kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D----hk~lvrQ----Is~GaYrE- 272 (668)
T KOG0611|consen 204 ADK--KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD----HKRLVRQ----ISRGAYRE- 272 (668)
T ss_pred ccc--cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch----HHHHHHH----hhcccccC-
Confidence 543 344668899999999999999885 67999999999999999999998765 2233332 33333222
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
| +......-|+.+|+..+|++|.|+.+|..|.
T Consensus 273 --P--------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 273 --P--------ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred --C--------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1 1112345689999999999999999999885
No 67
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=324.45 Aligned_cols=252 Identities=25% Similarity=0.337 Sum_probs=197.5
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---------c-----hhchHHHHHHhhhcCCCceeeEeeee
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---------G-----KREFTNEVTLLSRIHHRNLVQFLGYC 591 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---------~-----~~~~~~E~~~l~~l~HpnIv~l~g~~ 591 (854)
.|.+.+.||+|.||.|-+|+.. +++.||||++.+.... . .+...+|+.+|++++|||||+|+++.
T Consensus 98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL 177 (576)
T KOG0585|consen 98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL 177 (576)
T ss_pred heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence 4566788999999999999876 6899999999754211 1 13678899999999999999999998
Q ss_pred ee--cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEE
Q 003046 592 QE--EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAK 669 (854)
Q Consensus 592 ~~--~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~k 669 (854)
.+ .+..|||+|||..|.+...= .....+...++++++.++..||+|||.+ +||||||||+|+||+++|++|
T Consensus 178 DDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 178 DDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred cCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEE
Confidence 65 45789999999998875432 1222389999999999999999999998 999999999999999999999
Q ss_pred EEEecccccccCCCc----ceeecccccccccCccccccCc----CCCcchhhhHHHHHHHHHhCCcccccccccccccc
Q 003046 670 VSDFGLSKFAVDGAS----HVSSIVRGTVGYLDPEYYISQQ----LTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 741 (854)
Q Consensus 670 L~DFGla~~~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~ 741 (854)
|+|||.+.....+.. .......|||.|+|||...++. .+.+.||||+||.||.|+.|+.||-+...-+..
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~-- 328 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF-- 328 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH--
Confidence 999999976533211 1123367999999999998743 345789999999999999999999765521111
Q ss_pred hHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
. .++...|.-....+....+.+|+.+++.+||+.|.+..+|..|.-
T Consensus 329 ------~--------KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 329 ------D--------KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred ------H--------HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 1 122222222222244567889999999999999999999998864
No 68
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.6e-36 Score=341.04 Aligned_cols=261 Identities=24% Similarity=0.390 Sum_probs=203.5
Q ss_pred HHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCc-cchhchHHHHHHhhhcC-CCceeeEeeeeeecCe
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGR 596 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~ 596 (854)
...+.+.++||+|+||.||+|+.. .+..||||+++.... .....+.+|+++++++. ||||++++++|...+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 345567789999999999999863 134799999975432 23456889999999996 9999999999999999
Q ss_pred EEEEEEecCCCCHHHhhccccc----------------------------------------------------------
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLT---------------------------------------------------------- 618 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~---------------------------------------------------------- 618 (854)
.++||||+++|+|.+++.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999998854210
Q ss_pred ----------------------------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC
Q 003046 619 ----------------------------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 619 ----------------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
....+++..++.++.|+++||+|||+. +|+||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 012477888899999999999999998 9999999999999999
Q ss_pred CCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccch
Q 003046 665 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 742 (854)
Q Consensus 665 ~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l 742 (854)
++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||....... .+
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~---~~ 349 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS---TF 349 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH---HH
Confidence 999999999999765432222 1222346788999999999899999999999999999997 999987543111 11
Q ss_pred HHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.. ....+... ..+......+.+++.+|++.+|++||++.+|.+.|+.++
T Consensus 350 ~~----~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 350 YN----KIKSGYRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HH----HHhcCCCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 11 11111100 011122346889999999999999999999999999764
No 69
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.4e-36 Score=321.40 Aligned_cols=250 Identities=30% Similarity=0.482 Sum_probs=201.3
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|++.++..+|||.+.... ....++.+|++++++++||||+++++++......++||||+.+|
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05113 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG 84 (256)
T ss_pred eEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence 44668899999999999998877789999887443 23467899999999999999999999999888999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++..........
T Consensus 85 ~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 85 CLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 999998532 23688999999999999999999998 999999999999999999999999999876544332222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .+.... ..+....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~----~~~~~~----~~~~~~~--------- 221 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS----ETVEKV----SQGLRLY--------- 221 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----HHHHHH----hcCCCCC---------
Confidence 22345678999999998889999999999999999998 99998654411 111111 1111100
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
........+.+++.+|++.+|.+||++.+|++.|+
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00112356889999999999999999999998874
No 70
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.7e-36 Score=319.00 Aligned_cols=253 Identities=26% Similarity=0.447 Sum_probs=202.8
Q ss_pred HHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.+.++||+|+||.||+|...++..+|+|.+..... ....+.+|+.++++++|+|++++++++.. ...+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence 45667889999999999999988888999999875433 34578999999999999999999998854 56789999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 84 KGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 99999998642 234578999999999999999999998 9999999999999999999999999999765443222
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......++..|+|||++.+..++.++||||||+++|||++ |..||..... ..+..... .+..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----~~~~~~~~----~~~~--------- 221 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN----REVLEQVE----RGYR--------- 221 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHHH----cCCC---------
Confidence 2222335678999999988899999999999999999999 8899865431 12222211 1100
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
...+......+.+++.+|+..+|++|||+.++.+.|++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01111223468899999999999999999999999875
No 71
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=346.26 Aligned_cols=256 Identities=23% Similarity=0.328 Sum_probs=209.3
Q ss_pred HHhhccccccCcEEEEEEEECCC-cEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeee-eee------cCeEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDG-KEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGY-CQE------EGRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~-~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~-~~~------~~~~~ 598 (854)
..+++.|.+|||+.||.|+...+ .++|+|++-.......+.+.+||++|++|+ |+|||.+++. ... .-+.+
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 34578999999999999998765 999999988777777888999999999996 9999999993 321 13678
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
|.||||.+|.|-|++..+... +|.+.++++|+.++++|+++||.. .++|||||||-+||||+.+++.||||||.|.-
T Consensus 119 lLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred eehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 999999999999999766533 399999999999999999999984 67899999999999999999999999999863
Q ss_pred ccCCC-cce-------eecccccccccCcccc---ccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH
Q 003046 679 AVDGA-SHV-------SSIVRGTVGYLDPEYY---ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 679 ~~~~~-~~~-------~~~~~gt~~Y~aPE~~---~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~ 747 (854)
..... ... .-...-|+-|+|||++ .+..+++|+|||+|||+||-|+....||+...
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------------- 262 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------------- 262 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-------------
Confidence 22221 110 0113469999999997 46789999999999999999999999998653
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
-..|++..+.-.........+.+||..||+++|.+||++.||++++.++...
T Consensus 263 -------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 263 -------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 1123333332222345667899999999999999999999999999988754
No 72
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-37 Score=333.53 Aligned_cols=261 Identities=27% Similarity=0.399 Sum_probs=217.9
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEECC-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 522 DIEDATKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
|+++......++||-|.||.||.|.|+. .-.||||.++.+.. ..++|.+|+.+|+.++|||+|+|+|+|..+...|+|
T Consensus 263 EmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 263 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred hccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 3344444457899999999999999984 56799999986643 367899999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
.|||..|+|.++|+... ...++-...+.++.||+.|++||..+ .+|||||.++|+|+.++..+||+|||+++++.
T Consensus 342 TEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 99999999999997642 34466667788999999999999998 99999999999999999999999999999886
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.+.........-...|.|||-+....++.|+|||+|||+|||+.| |..||.+-.... +... +
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq--------VY~L---------L 479 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------VYGL---------L 479 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH--------HHHH---------H
Confidence 554433333345789999999999999999999999999999998 899997654221 1222 2
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...++.+.+..+..++.+|...||+++|.+||++.|+.+.+|.++.
T Consensus 480 EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 480 EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 3334445556677889999999999999999999999999998874
No 73
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.6e-36 Score=331.55 Aligned_cols=256 Identities=23% Similarity=0.387 Sum_probs=200.7
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCc----EEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
..+...+.||+|+||.||+|++. +++ .||||+++... ....+++.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 34556789999999999999864 333 48999986543 23456788999999999999999999999765 5679
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999998642 34578888999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCccee-ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 680 VDGASHVS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 680 ~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
........ ....++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... .+... ...+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~----~~~~~----~~~~~~~- 230 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSI----LEKGERL- 230 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----HhCCCCC-
Confidence 44332221 22234678999999999999999999999999999998 99999754311 11111 1111100
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+......+.+++.+|++.+|++||++.+|++.|..+..
T Consensus 231 --------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 --------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred --------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 0011122357889999999999999999999999987754
No 74
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.4e-36 Score=320.54 Aligned_cols=255 Identities=25% Similarity=0.425 Sum_probs=203.6
Q ss_pred HHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.+.++||+|+||.||+|++.+...||+|+++... .....+.+|++++++++||||+++++++.. ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 4567789999999999999998877789999987533 234578899999999999999999998754 56789999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 84 KGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred CCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 99999999642 234578899999999999999999998 9999999999999999999999999999765443322
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......++..|+|||+..+..++.++|||||||++|||++ |..||...... .+.. ....+..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~----~~~~----~~~~~~~--------- 221 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLD----QVERGYR--------- 221 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH----HHHH----HHhcCCC---------
Confidence 2223346778999999998899999999999999999999 88888654311 1111 1111100
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.....+....+.+++.+|++.+|++||++.++++.|+...
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 0111233456889999999999999999999999998753
No 75
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.3e-36 Score=322.45 Aligned_cols=265 Identities=23% Similarity=0.373 Sum_probs=200.6
Q ss_pred HhhccccccCcEEEEEEEE-----CCCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLV 600 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~-----~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV 600 (854)
.+.+.||+|+||+||++.. .+++.||+|+++.... .....+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5568899999999988653 2577899999875432 3456788999999999999999999988653 357899
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999842 3589999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCcce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 681 DGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 681 ~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
...... .....++..|+|||.+....++.++|||||||++|||++|..|+..... ....+..+.........+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK--KFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc--hhhhhhcccccccchhhhhhh
Confidence 332211 1223356779999999988899999999999999999999999854321 011111111100001111111
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
++.......+.....++.+++..|++.+|++||++++|++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 211111111222345788999999999999999999999999876
No 76
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=322.48 Aligned_cols=259 Identities=28% Similarity=0.423 Sum_probs=195.8
Q ss_pred hhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhh--cCCCceeeEeeeeeecC----eEEEEEEe
Q 003046 530 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG----RSVLVYEF 603 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~g~~~~~~----~~~lV~e~ 603 (854)
+.+.||+|.||.||||++. ++.||||++.. +.+..|..|-+|.+. ++|+||++++++-.... .++||++|
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence 4578999999999999998 69999999864 345567777766654 58999999999876655 88999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC------CCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
.+.|+|.++|. ...++|....+|+..+++||+|||+.. .++|+|||||++||||.+|+++.|+|||+|.
T Consensus 290 h~kGsL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 290 HPKGSLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred ccCCcHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 99999999995 446899999999999999999999743 4689999999999999999999999999998
Q ss_pred cccCCCcc-eeecccccccccCccccccCc-CC-----CcchhhhHHHHHHHHHhCCcccccccccc-------------
Q 003046 678 FAVDGASH-VSSIVRGTVGYLDPEYYISQQ-LT-----DKSDVYSFGVILLELISGQEAISNEKFGA------------- 737 (854)
Q Consensus 678 ~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~-~s-----~~sDVwS~Gvvl~elltG~~pf~~~~~~~------------- 737 (854)
.+..+... .....+||.+|||||++.+.- +. .+.||||+|.|||||++....+.....++
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP 444 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP 444 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence 76654332 223367999999999997632 22 36899999999999999765442111000
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...++...+... ...|.+.+.. ....+..+.+.+..||..||+.|-|+.=|.+.+.++..
T Consensus 445 t~e~mq~~VV~k--------K~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 445 TLEEMQELVVRK--------KQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred CHHHHHHHHHhh--------ccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 001111111111 0111111111 12445678899999999999999999999998887754
No 77
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.9e-36 Score=324.83 Aligned_cols=261 Identities=26% Similarity=0.467 Sum_probs=206.5
Q ss_pred HHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
+..+.+.+.||+|+||.||++... ++..+|+|.+..........+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 344556789999999999999752 34568999887655445667899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccc---------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEE
Q 003046 599 LVYEFMHNGTLKEHLYGTL---------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAK 669 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~k 669 (854)
+||||+++++|.+++.... .....+++..+..++.|++.||+|||+. +++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 9999999999999986432 1223589999999999999999999998 999999999999999999999
Q ss_pred EEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHH
Q 003046 670 VSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 670 L~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~ 747 (854)
|+|||+++........ ......++..|+|||++.+..++.++|||||||+++||++ |..||...... .+...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~----~~~~~-- 234 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIEC-- 234 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH--
Confidence 9999999755332211 1122345778999999998899999999999999999998 89998654311 11111
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+..+.... .... ....+.+++.+|++.+|.+||++.||.+.|+.+..
T Consensus 235 --i~~~~~~~-----~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 235 --ITQGRVLQ-----RPRT----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred --HHcCCcCC-----CCCC----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 12222111 0111 22458899999999999999999999999998753
No 78
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.7e-36 Score=319.03 Aligned_cols=256 Identities=26% Similarity=0.426 Sum_probs=205.7
Q ss_pred HHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+..+.+.++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|+||+++++++. .+..+++||
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 44567778899999999999999988899999999875433 3567889999999999999999999874 456899999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 81 YMENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred cCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999988542 245688999999999999999999998 9999999999999999999999999999765433
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.........++..|+|||++.+..++.++||||||+++|||++ |+.||...... .+.... ..+....
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~----~~~~~~~---- 223 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP----EVIQNL----ERGYRMP---- 223 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH----HHHHHH----HcCCCCC----
Confidence 2222223346778999999998889999999999999999999 99999754421 122211 1111000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
... ....++.+++.+|++.+|++||+++++.+.|+.
T Consensus 224 -~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 -RPD----NCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -CCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 011 122468899999999999999999999999874
No 79
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5e-36 Score=325.29 Aligned_cols=258 Identities=26% Similarity=0.462 Sum_probs=206.5
Q ss_pred HHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
+.+.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++++++++|+||+++++++...+..++||
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF 86 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEE
Confidence 445688999999999999753 34568999987655555567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEE
Q 003046 602 EFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAK 669 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~k 669 (854)
||+++++|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+|
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 163 (291)
T cd05094 87 EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVK 163 (291)
T ss_pred ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 9999999999986432 1224588999999999999999999998 999999999999999999999
Q ss_pred EEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHH
Q 003046 670 VSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 670 L~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~ 747 (854)
|+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .+.+.
T Consensus 164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~~~-- 237 (291)
T cd05094 164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT----EVIEC-- 237 (291)
T ss_pred ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH--
Confidence 999999975443221 11223446789999999999999999999999999999999 99998654411 12221
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+..... .......+.+++.+|++.+|++||++.+|++.|+++..
T Consensus 238 --~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 238 --ITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred --HhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 122221111 11123468899999999999999999999999998743
No 80
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-36 Score=327.70 Aligned_cols=250 Identities=25% Similarity=0.371 Sum_probs=209.6
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCe-EEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-SVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~-~~lV~e 602 (854)
.|...+.+|+|+||.++..+++ +++.+++|.+.-.. ...++...+|+.++++++|||||.+.+.+..++. .++||+
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~ 84 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVME 84 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEe
Confidence 3556789999999999999877 57889999987543 3334578899999999999999999999999888 999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|++||++.+.+.... +.-+++..+++++.|++.|+.|||++ +|+|||||+.|||++.+..|||+|||+|+.....
T Consensus 85 Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 85 YCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred ecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 999999999996543 56688999999999999999999988 9999999999999999999999999999987665
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.. ....+.||+.||.||++.+.+|..|+|||||||++|||++-+++|...+... ++.-+...
T Consensus 160 ~~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~----Li~ki~~~------------- 221 (426)
T KOG0589|consen 160 DS-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE----LILKINRG------------- 221 (426)
T ss_pred hh-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH----HHHHHhhc-------------
Confidence 42 3445679999999999999999999999999999999999999998766332 22211111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.....++..++..|++.+|+.||++.+++.+
T Consensus 222 ~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1112233344568899999999999999999999987
No 81
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-35 Score=327.55 Aligned_cols=200 Identities=28% Similarity=0.407 Sum_probs=172.3
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
...|.+.++||+|+||.||+|.+. +++.+|+|++.... ......+.+|++++++++||||++++++|..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 445667889999999999999887 57889999887542 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++.....++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999853 34578888899999999999999974 27999999999999999999999999998754322
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~ 733 (854)
......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 122345899999999999888999999999999999999999999654
No 82
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.9e-36 Score=332.59 Aligned_cols=250 Identities=24% Similarity=0.308 Sum_probs=196.7
Q ss_pred HhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC----ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.||+|+||.||+++.. +++.||+|++.... ......+..|++++.++ +||||+++++++...+..++
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (332)
T cd05614 3 ELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHL 82 (332)
T ss_pred eEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEE
Confidence 45688999999999998753 57899999987532 12234577899999999 59999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 83 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 83 ILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999998853 34588889999999999999999998 9999999999999999999999999999765
Q ss_pred cCCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
............||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+ ...+..
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~----~~~~~~------ 225 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEV----SRRILK------ 225 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHH----HHHHhc------
Confidence 44333333445699999999999865 4788999999999999999999999654321111111 111111
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.++.+... ....+.+++.+|++.||++|| ++.++++|
T Consensus 226 ~~~~~~~~----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 CDPPFPSF----IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCCCCC----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 11111112 223577899999999999999 78888876
No 83
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=9.6e-36 Score=332.36 Aligned_cols=244 Identities=25% Similarity=0.380 Sum_probs=189.8
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.++||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++|+||+++++++...+..++||||+++|
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 157 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG 157 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence 4678999999999999876 689999999865432 23467889999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+.. ...+..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 158 ~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~~ 225 (353)
T PLN00034 158 SLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-PC 225 (353)
T ss_pred cccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc-cc
Confidence 986532 244567778999999999999998 999999999999999999999999999976543221 12
Q ss_pred ecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 688 SIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
....||..|+|||++.. ...+.++|||||||++|||++|+.||......+ ...+... ......
T Consensus 226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~----~~~~~~------- 293 (353)
T PLN00034 226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-WASLMCA----ICMSQP------- 293 (353)
T ss_pred cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHH----HhccCC-------
Confidence 33468999999998753 233468999999999999999999997433111 1111110 000000
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..........+.+++.+|++.+|++||++.||++|
T Consensus 294 --~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 --PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred --CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111223468899999999999999999999986
No 84
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.1e-36 Score=324.71 Aligned_cols=264 Identities=21% Similarity=0.282 Sum_probs=193.6
Q ss_pred HHhhccccccCcEEEEEEEEC--CCcEEEEEEEecCCcc--chhchHHHHHHhhhc---CCCceeeEeeeee-----ecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRI---HHRNLVQFLGYCQ-----EEG 595 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l---~HpnIv~l~g~~~-----~~~ 595 (854)
|.+.+.||+|+||.||+|+.. +++.||||+++..... ....+.+|+.+++.+ +||||++++++|. ...
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~ 82 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 82 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence 456688999999999999873 4678999998754322 233566777777665 6999999999985 345
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
..++||||+. ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 83 ~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 83 KLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred cEEEEEccCC-CCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 6899999996 6898888542 234578899999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+....+.+...........
T Consensus 157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 9765432 22334568999999999998899999999999999999999999997654222222222211100000000
Q ss_pred c------cccCCccc---CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 Q------GIIDPSLL---DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~------~~id~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..+.+.-. ..........+.+++.+|++.+|++||++.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0 00000000 00001122456799999999999999999999864
No 85
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.1e-36 Score=331.13 Aligned_cols=242 Identities=26% Similarity=0.362 Sum_probs=194.0
Q ss_pred ccccccCcEEEEEEEEC----CCcEEEEEEEecCC----ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.||+|+||.||+++.. .++.||||+++... ......+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999753 57899999987532 12234577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+.+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999998842 34577788888999999999999998 99999999999999999999999999987433222
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +..+.. .+
T Consensus 155 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-------~~~~~-~~~~~~------~~ 219 (323)
T cd05584 155 T-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-------KTIDK-ILKGKL------NL 219 (323)
T ss_pred C-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-------HHHHH-HHcCCC------CC
Confidence 1 223356999999999999988999999999999999999999999764411 11111 111111 01
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
... ....+.+++.+|++.+|++|| ++.+++++
T Consensus 220 ~~~----~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 220 PPY----LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCC----CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 111 123578999999999999999 88888876
No 86
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=8e-36 Score=316.20 Aligned_cols=247 Identities=29% Similarity=0.435 Sum_probs=195.7
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999875 68899999876432 23356789999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee-e
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS-S 688 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~-~ 688 (854)
.+++.. ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......... .
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRT---EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 999853 234578999999999999999999998 999999999999999999999999999875432211111 1
Q ss_pred cccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 689 IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 689 ~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
...++..|+|||.+.++.++.++|||||||++|||++ |..||...... .. ........ ....
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~----~~----~~~~~~~~---------~~~~ 217 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ----QT----REAIEQGV---------RLPC 217 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH----HH----HHHHHcCC---------CCCC
Confidence 1123467999999999999999999999999999998 88888654311 11 11111110 0011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
+......+.+++.+|++.+|++||++.||.+.|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1122346889999999999999999999999886
No 87
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.8e-36 Score=315.33 Aligned_cols=247 Identities=27% Similarity=0.408 Sum_probs=198.6
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 610 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~ 610 (854)
+.||+|+||.||+|...+++.+|+|++..... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999988889999999875432 22446889999999999999999999999999999999999999999
Q ss_pred HhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeecc
Q 003046 611 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIV 690 (854)
Q Consensus 611 ~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 690 (854)
+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..............
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 988532 34578999999999999999999998 999999999999999999999999999875433322222223
Q ss_pred cccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 691 RGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 691 ~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
.++..|+|||++.+..++.++|||||||++||+++ |..||...... ... .....+... ..+.
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~----~~~----~~~~~~~~~---------~~~~ 217 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ----QAR----EQVEKGYRM---------SCPQ 217 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH----HHH----HHHHcCCCC---------CCCC
Confidence 45678999999998999999999999999999998 99999654311 111 111111110 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.....+.+++.+|++.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 22356889999999999999999999999875
No 88
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=9.1e-36 Score=329.18 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=196.1
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.+ +++.||+|+++... ......+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999876 57899999997542 22234567888888776 899999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~ 152 (329)
T cd05618 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DT 152 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Cc
Confidence 99988874 345688999999999999999999998 99999999999999999999999999987532221 12
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc-ccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-CRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~-~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+....+.....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------- 222 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------- 222 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------
Confidence 2345699999999999999999999999999999999999999964321111 11222333332222211
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPS------ISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs------m~eV~~~ 799 (854)
..+......+.+++.+|++.||++||+ +.++++|
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 011122345779999999999999998 5777766
No 89
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.3e-35 Score=314.15 Aligned_cols=258 Identities=25% Similarity=0.391 Sum_probs=205.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+++++.++||||+++++++...+..++|+||
T Consensus 4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 83 (267)
T cd08228 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLEL 83 (267)
T ss_pred eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEe
Confidence 445788999999999999876 68999999876432 22345688899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.........+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999998854333345578889999999999999999998 99999999999999999999999999987654322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+... +..... +.
T Consensus 161 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-----~~~~~~~~-~~~~~~-----~~- 227 (267)
T cd08228 161 T-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLFSLCQK-IEQCDY-----PP- 227 (267)
T ss_pred H-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-----cHHHHHHH-HhcCCC-----CC-
Confidence 1 11234588999999999988899999999999999999999999864331 11222221 111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.........+.+++.+|++.+|++||++.+|++.|+++
T Consensus 228 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 --LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11112335688999999999999999999999999875
No 90
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-35 Score=323.33 Aligned_cols=261 Identities=24% Similarity=0.324 Sum_probs=194.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||.||+|+.+ +++.||||++..... .....+.+|+.+++.++||||+++++++..+...++||||+.
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 86 (303)
T cd07869 7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH 86 (303)
T ss_pred ceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC
Confidence 456789999999999999886 688999999875432 223457789999999999999999999999999999999996
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 87 -~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 158 (303)
T cd07869 87 -TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-H 158 (303)
T ss_pred -cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-c
Confidence 678777743 234578888999999999999999998 99999999999999999999999999987543221 2
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC---Cccc----
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG---DIQG---- 757 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~---~~~~---- 757 (854)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... .............. ....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI---QDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH---HHHHHHHHHHhCCCChhhccchhhc
Confidence 2233458999999999875 45788999999999999999999999754311 11111111110000 0000
Q ss_pred -ccCCc-cc--CcCCH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 -IIDPS-LL--DEYDI-------QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 -~id~~-l~--~~~~~-------~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..++. .. ..... .....+.+++.+|++.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000 00 00000 012356789999999999999999999875
No 91
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-36 Score=333.83 Aligned_cols=242 Identities=24% Similarity=0.330 Sum_probs=194.6
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||++... +++.||+|++.... ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999875 68899999997542 222345678999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
+|.+++. ....+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (325)
T cd05594 81 ELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-AT 152 (325)
T ss_pred cHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cc
Confidence 9998874 34568899999999999999999997 5 89999999999999999999999999987533221 12
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..... .+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~----~~~~~----i~~~~~------~~p~~ 218 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFEL----ILMEEI------RFPRT 218 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH----HHHHH----HhcCCC------CCCCC
Confidence 23346999999999999999999999999999999999999999754311 11111 111110 11111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
....+.+++.+|++.||++|+ ++.++++|
T Consensus 219 ----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 219 ----LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ----CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 223578899999999999996 89999887
No 92
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-35 Score=309.82 Aligned_cols=266 Identities=22% Similarity=0.257 Sum_probs=200.9
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCc-eeeEeeeeeecC------eEEE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRN-LVQFLGYCQEEG------RSVL 599 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~~------~~~l 599 (854)
..++||+|+||+||+|+.+ +|+.||+|+++-.... ......+|+.+|+.++|+| |+++++++...+ ..++
T Consensus 15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence 3467999999999999876 6899999999765432 3455689999999999999 999999998877 7889
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||++. +|..++.........++...+..++.||+.||+|||++ +|+||||||+||||+++|.+||+|||+|+..
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 9999964 89999865432224566678899999999999999999 9999999999999999999999999999854
Q ss_pred cCCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh---hhcCCc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH---IESGDI 755 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~---~~~~~~ 755 (854)
.-+. ...+...+|.+|+|||++.+. .|+...||||+||++.||++++..|.+... ...+...+... -++.+.
T Consensus 171 ~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 171 SIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---IDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred cCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHHcCCCCccCCC
Confidence 4222 223445689999999999876 799999999999999999999999987652 11222211111 111111
Q ss_pred ccccCCccc----CcC-----CHHH---HHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHH
Q 003046 756 QGIIDPSLL----DEY-----DIQS---MWKIEEKALMCVLPHGHMRPSISEVLKD--IQDA 803 (854)
Q Consensus 756 ~~~id~~l~----~~~-----~~~~---~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~~ 803 (854)
....-+... ... .... .....+++.+|++.+|..|.|++..++| +...
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 111111110 000 0000 1367899999999999999999999987 5543
No 93
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=334.46 Aligned_cols=244 Identities=23% Similarity=0.269 Sum_probs=197.6
Q ss_pred HHHhhccccccCcEEEEEEEECC--CcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD--GKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~--~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|.++. +..||+|++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 110 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVL 110 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEE
Confidence 35567899999999999998653 3689999986532 223456788999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 111 Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 111 EFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999853 34688889999999999999999998 999999999999999999999999999976532
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... +. ..+..+..
T Consensus 184 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~----~~----~~i~~~~~------ 245 (340)
T PTZ00426 184 R----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL----IY----QKILEGII------ 245 (340)
T ss_pred C----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH----HH----HHHhcCCC------
Confidence 2 223469999999999999889999999999999999999999997644111 11 11111111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.+.... ...+.+++.+|++.+|++|+ +++|+++|
T Consensus 246 ~~p~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 YFPKFL----DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCCC----CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 011111 23467899999999999995 89999887
No 94
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-37 Score=301.47 Aligned_cols=265 Identities=20% Similarity=0.292 Sum_probs=210.3
Q ss_pred HHHHHhhccccccCcEEEEEEE-ECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGK-LKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSV 598 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~ 598 (854)
..+|.+.+.+|+|||+-||.++ ..+++.+|+|++.....++.+...+|++..++++|||++++++++..+ ...+
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4467788999999999999997 457889999999877767778899999999999999999999988543 3589
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
++++|...|+|.+.+.....++..+++.+.+.|+.++++||++||+. .++++||||||.|||+.+.+.++|.|||.++.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999999987766777899999999999999999999997 34699999999999999999999999998864
Q ss_pred ccCCCc----ce----eecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH
Q 003046 679 AVDGAS----HV----SSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 679 ~~~~~~----~~----~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~ 747 (854)
..-... .. .....-|..|+|||.+. +...++++|||||||+||+|+.|..||+..-..+....+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL----- 253 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL----- 253 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE-----
Confidence 321110 00 11123689999999986 456789999999999999999999999754321111000
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+..+.+.-..+....+.+.+++..|++.||.+||++.+++.+++.++
T Consensus 254 ---------Av~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 254 ---------AVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---------eeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111112211111224567899999999999999999999999998753
No 95
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1e-35 Score=328.78 Aligned_cols=250 Identities=22% Similarity=0.312 Sum_probs=197.3
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.+ +++.||||+++.... .....+..|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999876 688999999975422 2234577899999888 799999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~ 152 (329)
T cd05588 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDT 152 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-CCc
Confidence 99988874 345689999999999999999999998 9999999999999999999999999998743221 122
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc-ccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-CRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~-~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ......+....+..+... +..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~ 226 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR------IPR 226 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC------CCC
Confidence 2345699999999999999999999999999999999999999964332111 112223333322222111 111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPS------ISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs------m~eV~~~ 799 (854)
. ....+.+++.+|++.+|.+||+ +.++++|
T Consensus 227 ~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 227 S----LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred C----CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 1 2235788999999999999997 7788766
No 96
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.9e-36 Score=322.16 Aligned_cols=255 Identities=24% Similarity=0.425 Sum_probs=200.3
Q ss_pred HHhhccccccCcEEEEEEEEC-----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
+.+.+.||+|+||.||+|.+. .++.||+|.+.... ......+.+|++++++++||||+++++++......++||
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 86 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLF 86 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEE
Confidence 446789999999999999852 46789999987433 233457889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhccccc-------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcE
Q 003046 602 EFMHNGTLKEHLYGTLT-------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 668 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~ 668 (854)
||+++++|.+++..... ....+++.+...++.|++.||+|||+. +++||||||+|||++.++.+
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (283)
T cd05090 87 EYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLHV 163 (283)
T ss_pred EcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCCcE
Confidence 99999999999853211 123578889999999999999999998 99999999999999999999
Q ss_pred EEEEecccccccCCC-cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHH
Q 003046 669 KVSDFGLSKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWA 746 (854)
Q Consensus 669 kL~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~ 746 (854)
||+|||+++...... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... ..+.+..
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~----~~~~~~~ 239 (283)
T cd05090 164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN----QEVIEMV 239 (283)
T ss_pred EeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHH
Confidence 999999997553322 122223345778999999998889999999999999999998 9889865431 1222221
Q ss_pred HHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 747 KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 747 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
. ...... ... ....++.+++.+|++.+|++||++.+|.++|..
T Consensus 240 ~----~~~~~~-----~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 R----KRQLLP-----CSE----DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H----cCCcCC-----CCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 111110 111 122457889999999999999999999999864
No 97
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.6e-36 Score=329.03 Aligned_cols=242 Identities=26% Similarity=0.384 Sum_probs=189.7
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.. +++.||||+++.... .....+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 578899999975421 2233445566666654 899999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence 999988843 34688888999999999999999998 99999999999999999999999999997543322 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+..- +.... +.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~----~~~~~----i~~~~------~~---- 214 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED----ELFDS----ILNDR------PH---- 214 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH----HHHHH----HHcCC------CC----
Confidence 33456999999999999999999999999999999999999999764411 11111 11110 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSIS-EVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~-eV~~~ 799 (854)
++......+.+++.+|++.+|++||++. ++.++
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 1111223567899999999999999875 55543
No 98
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.1e-36 Score=330.07 Aligned_cols=242 Identities=22% Similarity=0.332 Sum_probs=193.8
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.+ +++.||||++.... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999876 57899999987542 22234567788888866 799999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+.+. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (321)
T cd05591 81 GDLMFQIQ----RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VT 152 (321)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cc
Confidence 99998884 345688889999999999999999998 99999999999999999999999999987533222 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... . ..+.. ..+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~----~~~~~---i-~~~~~---~~p----- 216 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED----DLFES---I-LHDDV---LYP----- 216 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH----HHHHH---H-HcCCC---CCC-----
Confidence 23456899999999999999999999999999999999999999765421 11111 1 11110 001
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRP-------SISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RP-------sm~eV~~~ 799 (854)
......+.+++..|++.+|++|| ++.++++|
T Consensus 217 --~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 217 --VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred --CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 11123578899999999999999 88888876
No 99
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-35 Score=333.68 Aligned_cols=259 Identities=20% Similarity=0.271 Sum_probs=194.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.|.+.+.||+|+||.||++... +++.||+|+.. ...+.+|++++++++||||+++++++......++|+|++.
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence 4566789999999999999875 68899999753 2356789999999999999999999999999999999985
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+........
T Consensus 167 -~~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 167 -TDLYCYLA----AKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred -CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 68888774 234688999999999999999999998 9999999999999999999999999999754333223
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc-cccc--cchHHHHHHhhhc--CC------
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-GANC--RNIVQWAKLHIES--GD------ 754 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~-~~~~--~~l~~~~~~~~~~--~~------ 754 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||-.... .... ............. ..
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 33445799999999999999999999999999999999999987643221 1000 0000000000000 00
Q ss_pred --cccc---------cCCcccCcC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 --IQGI---------IDPSLLDEY--DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 --~~~~---------id~~l~~~~--~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+... ..+...... .......+.+++.+|++.||++|||++|++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000 000000000 01223468899999999999999999999875
No 100
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.9e-36 Score=335.97 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=197.3
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+.+.||+|+||.||+++.+ +++.||+|++.... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 123 (370)
T cd05596 44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVME 123 (370)
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEc
Confidence 4556788999999999999876 58899999996432 2233457789999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ..++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 y~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 124 YMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred CCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999998843 3467777888999999999999998 9999999999999999999999999999765433
Q ss_pred CcceeecccccccccCccccccC----cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQ----QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~----~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.........||+.|+|||++.+. .++.++|||||||++|||++|+.||......... ...........
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-------~~i~~~~~~~~- 267 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY-------SKIMDHKNSLT- 267 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH-------HHHHcCCCcCC-
Confidence 22223345699999999998653 4788999999999999999999999765421111 11111100000
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~ 799 (854)
... .......+.+++..|++.+|++ ||++.|+++|
T Consensus 268 ----~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 268 ----FPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----CCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 000 0112345778999999999987 9999999887
No 101
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.3e-35 Score=321.85 Aligned_cols=257 Identities=26% Similarity=0.439 Sum_probs=202.6
Q ss_pred HhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.||+|+||.||+|... ....+|+|.+..... .....+.+|+.+++.++||||+++++.+...+..++|+
T Consensus 3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (290)
T cd05045 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIV 82 (290)
T ss_pred cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEE
Confidence 35678999999999999764 235789998865432 23456889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccc--------------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeE
Q 003046 602 EFMHNGTLKEHLYGTL--------------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~--------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
||+.+|+|.+++.... .....+++..++.++.|++.||+|||+. +++||||||+|||
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nil 159 (290)
T cd05045 83 EYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNVL 159 (290)
T ss_pred EecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheEE
Confidence 9999999999985421 1123578999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccc
Q 003046 662 LDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANC 739 (854)
Q Consensus 662 l~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~ 739 (854)
+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---- 235 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP---- 235 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH----
Confidence 999999999999999755333222 1223346778999999988889999999999999999998 9999865431
Q ss_pred cchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 740 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+..... .+.. ...+......+.+++.+|++.+|++||++.|+++.|++++.
T Consensus 236 ~~~~~~~~----~~~~---------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 ERLFNLLK----TGYR---------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHHh----CCCC---------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 12222211 1100 00111123468899999999999999999999999999864
No 102
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-36 Score=333.88 Aligned_cols=238 Identities=26% Similarity=0.368 Sum_probs=198.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccc---hhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG---KREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~---~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
.+..+||+|.||+|+++..+ +++.+|||++++...-. .+....|.+++... +||.++.++..|...+++++||||
T Consensus 371 ~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey 450 (694)
T KOG0694|consen 371 RLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEY 450 (694)
T ss_pred EEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEe
Confidence 36789999999999999987 57889999999875443 34456788888777 599999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+.||++..+. ..+.+++..+.-++..|+.||.|||++ +|||||||.+|||||.+|.+||+|||+++... ..
T Consensus 451 ~~Ggdm~~~~-----~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-~~ 521 (694)
T KOG0694|consen 451 VAGGDLMHHI-----HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-GQ 521 (694)
T ss_pred cCCCcEEEEE-----ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC-CC
Confidence 9999944333 456789999999999999999999999 99999999999999999999999999998432 22
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
...+.+.+||+.|||||++.+..|+.++|.|||||+|||||.|..||.+.+..+....|+. . |
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~--------d------~--- 584 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN--------D------E--- 584 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc--------C------C---
Confidence 3456778999999999999999999999999999999999999999997764433333322 0 1
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSI 793 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm 793 (854)
..|+.-...+...++.+.+..+|++|-.+
T Consensus 585 -~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 -VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 12333445567889999999999999976
No 103
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7.1e-36 Score=321.48 Aligned_cols=257 Identities=24% Similarity=0.425 Sum_probs=200.5
Q ss_pred HHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..+.+.+.||+|+||.||+|.+. .+..||||++.... .....++.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~ 85 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 85 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence 34566789999999999999764 24679999986432 233456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccc------cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEE
Q 003046 599 LVYEFMHNGTLKEHLYGTLTH------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~D 672 (854)
+||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEECC
Confidence 999999999999998542211 23467888899999999999999998 999999999999999999999999
Q ss_pred ecccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhh
Q 003046 673 FGLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 673 FGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
||+++......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||...... ..... .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~----~~~~~----~ 234 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE----QVLRF----V 234 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----H
Confidence 99987544322211 122345788999999998899999999999999999999 78888654311 12211 1
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..+..... +......+.+++.+|++.+|++||++.|++++|++
T Consensus 235 ~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 MEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HcCCcCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11111110 11123468899999999999999999999998863
No 104
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-36 Score=337.75 Aligned_cols=250 Identities=24% Similarity=0.304 Sum_probs=200.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|+.. +++.||||+++... ......+..|++++..++||||+++++++.+++..++||||
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (350)
T cd05573 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY 82 (350)
T ss_pred ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence 345688999999999999887 68999999997542 23345688899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 83 MPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999853 25688889999999999999999998 99999999999999999999999999997654332
Q ss_pred ----------------------------cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc
Q 003046 684 ----------------------------SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF 735 (854)
Q Consensus 684 ----------------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~ 735 (854)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 1122334699999999999999999999999999999999999999976542
Q ss_pred cccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 003046 736 GANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-ISEVLKD 799 (854)
Q Consensus 736 ~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-m~eV~~~ 799 (854)
......+..|.. ...+ +. ... ....+.+++.+|++ +|.+||+ +.|+++|
T Consensus 236 ~~~~~~i~~~~~----~~~~-----p~-~~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 QETYNKIINWKE----SLRF-----PP-DPP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHHHhccCC----cccC-----CC-CCC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 211111111100 0000 00 000 23457789999997 9999999 9999987
No 105
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.7e-36 Score=321.37 Aligned_cols=257 Identities=22% Similarity=0.379 Sum_probs=201.8
Q ss_pred HHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..+.+.+.||+|+||.||+|+.. .++.||+|+++..... ....+.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 34667889999999999999864 2478999998754322 2456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC
Q 003046 599 LVYEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 666 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~ 666 (854)
+++||+.+++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 9999999999999984221 1123578888999999999999999998 999999999999999999
Q ss_pred cEEEEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHH
Q 003046 667 RAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQ 744 (854)
Q Consensus 667 ~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~ 744 (854)
.+||+|||+++....... .......+++.|+|||.+.++.++.++|||||||++|||++ |..||.+... ..+.+
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~~~ 237 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDVIE 237 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH
Confidence 999999999875533221 11223346789999999998899999999999999999998 8888865431 12222
Q ss_pred HHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 745 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 745 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
. +..+.... ........+.+++..|++.+|++||++.+|++.|+.
T Consensus 238 ~----i~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 M----IRNRQVLP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H----HHcCCcCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 11111111 111233457899999999999999999999999874
No 106
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3e-35 Score=314.46 Aligned_cols=258 Identities=24% Similarity=0.367 Sum_probs=206.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|... +++.+|||.+.... .....++.+|+.+++.++||||+++++++..++..+++|||
T Consensus 4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 83 (267)
T cd08229 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 83 (267)
T ss_pred hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEe
Confidence 456788999999999999864 78999999876432 22345788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 84 ADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred cCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999998864333455689999999999999999999998 99999999999999999999999999987654332
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......|+..|+|||.+.+..++.++||||||+++|||++|..||..... ......... ... ..+.+
T Consensus 161 ~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~-~~~-----~~~~~ 228 (267)
T cd08229 161 T-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKI-EQC-----DYPPL 228 (267)
T ss_pred c-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-----hHHHHhhhh-hcC-----CCCCC
Confidence 2 12234588999999999988899999999999999999999999865431 111111111 111 11111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
. .......+.+++.+|++.+|++||||.+|++.++++
T Consensus 229 ~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 229 P---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred C---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1 112334688999999999999999999999999875
No 107
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.4e-36 Score=323.55 Aligned_cols=259 Identities=25% Similarity=0.421 Sum_probs=204.5
Q ss_pred HHHHhhccccccCcEEEEEEEECC------CcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~ 597 (854)
..+.+.+.||+|+||.||+|.... ...+|+|++.... ......+.+|++++.++ +|+||+++++++..++..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 344567899999999999998642 3679999987542 22345688899999999 799999999999999999
Q ss_pred EEEEEecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC
Q 003046 598 VLVYEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
+++|||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTED 168 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCC
Confidence 99999999999999985421 2345688999999999999999999998 99999999999999999
Q ss_pred CcEEEEEecccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchH
Q 003046 666 MRAKVSDFGLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIV 743 (854)
Q Consensus 666 ~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~ 743 (854)
+.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||......+ +.
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~~ 244 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE----LF 244 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH----HH
Confidence 999999999998654432211 122235678999999998899999999999999999998 999987544211 11
Q ss_pred HHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 744 QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
. ....+.. ...+......+.+++.+|++.+|++||||.||++.|++++
T Consensus 245 ~----~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 K----LLKEGYR---------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred H----HHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1 1111111 0111122346889999999999999999999999999864
No 108
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.4e-35 Score=315.50 Aligned_cols=246 Identities=28% Similarity=0.425 Sum_probs=195.1
Q ss_pred cccccCcEEEEEEEEC---CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 533 KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
.||+|+||.||+|.++ +++.+|+|+++.... ....++.+|+.+++.++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999753 578899999864432 234678899999999999999999998864 4678999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999842 34688899999999999999999998 999999999999999999999999999986544332211
Q ss_pred --ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 688 --SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 688 --~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
....++..|+|||.+....++.++|||||||++|||++ |+.||...... .+... +..+.... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~----i~~~~~~~-----~- 219 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN----EVTQM----IESGERME-----C- 219 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHCCCCCC-----C-
Confidence 12234678999999988889999999999999999998 99999754311 12221 22221111 1
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+......+.+++.+|++.+|++||++.+|++.|++.
T Consensus 220 ---~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 ---PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ---CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111234578999999999999999999999999863
No 109
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.5e-35 Score=328.43 Aligned_cols=264 Identities=20% Similarity=0.285 Sum_probs=193.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~l 599 (854)
|.+.++||+|+||.||+|+.. +++.||||++... .......+.+|++++++++||||+++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 345688999999999999876 6899999998643 222345688999999999999999999988543 24799
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+. ++|.+++. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 82 v~e~~~-~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 82 VFELME-SDLHQVIK----ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEecCC-CCHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 999995 68888874 344688999999999999999999998 9999999999999999999999999999754
Q ss_pred cCCCc--ceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-------HH
Q 003046 680 VDGAS--HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KL 748 (854)
Q Consensus 680 ~~~~~--~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-------~~ 748 (854)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.... ..
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32211 12233568999999999875 678999999999999999999999997543111000000000 00
Q ss_pred hhhcCCcccc---cCCcccCcCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 HIESGDIQGI---IDPSLLDEYD---IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~~~~~~---id~~l~~~~~---~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+........ +.+....... ......+.+++.+|++.+|++||+++|++++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000000 0000000000 0112356799999999999999999999987
No 110
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.7e-36 Score=329.51 Aligned_cols=242 Identities=26% Similarity=0.378 Sum_probs=192.7
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.+ +++.||||++.... ......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 57899999987542 22334566788888776 699999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~ 152 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KT 152 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cc
Confidence 999988843 34688899999999999999999998 99999999999999999999999999987532221 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..+.. . ....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~----~~~~~----i~~~~~---~---~~~~ 218 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED----DLFEA----ILNDEV---V---YPTW 218 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHH----HhcCCC---C---CCCC
Confidence 23456999999999999999999999999999999999999999765421 11111 111111 0 0111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm------~eV~~~ 799 (854)
....+.+++.+|++.||++||++ +++++|
T Consensus 219 ----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 219 ----LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred ----CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 12357889999999999999998 666655
No 111
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.6e-35 Score=334.55 Aligned_cols=263 Identities=24% Similarity=0.395 Sum_probs=203.6
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCcc-chhchHHHHHHhhhcC-CCceeeEeeeeeec
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIH-HRNLVQFLGYCQEE 594 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~ 594 (854)
+....+.+.+.||+|+||.||+|++. .++.||||+++..... ....+.+|+++|.++. ||||++++++|...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 33444556789999999999999864 2468999999754322 2346889999999997 99999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhccccc--------------------------------------------------------
Q 003046 595 GRSVLVYEFMHNGTLKEHLYGTLT-------------------------------------------------------- 618 (854)
Q Consensus 595 ~~~~lV~e~~~~gsL~~~L~~~~~-------------------------------------------------------- 618 (854)
+..++|+||+++|+|.++++....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 999999999999999999864211
Q ss_pred --------------------------------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCe
Q 003046 619 --------------------------------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 619 --------------------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
....+++.....++.|++.||+|||+. +++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 112367778899999999999999998 999999999999
Q ss_pred EEcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccccc
Q 003046 661 LLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGAN 738 (854)
Q Consensus 661 Ll~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~ 738 (854)
|+++++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~- 349 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE- 349 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH-
Confidence 9999999999999999754332211 1122346789999999998889999999999999999998 888986543111
Q ss_pred ccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+ ...+..+.. ...+......+.+++.+|++.+|.+||+++||++.|+.++
T Consensus 350 --~~----~~~~~~~~~---------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 --QF----YNAIKRGYR---------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --HH----HHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 01 111111110 0011112346889999999999999999999999999864
No 112
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.7e-35 Score=315.44 Aligned_cols=253 Identities=25% Similarity=0.421 Sum_probs=201.5
Q ss_pred HHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.+.+.||+|+||.||+|....+..+|+|++.... .....+.+|++++++++|+|++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 3456678999999999999998877789999876443 23456889999999999999999999875 456789999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++... ....+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||+++........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 84 KGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 99999999643 234578899999999999999999998 9999999999999999999999999999765433222
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......++..|+|||+..+..++.++|||||||++|||++ |+.||...... ....+. ..+...
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~----~~~~~~-------- 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR----EVLEQV----ERGYRM-------- 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCCC--------
Confidence 2223346778999999998899999999999999999999 89998754311 122221 111100
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..+......+.+++.+|++.+|++||++++|++.|++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111223568899999999999999999999999875
No 113
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.8e-36 Score=336.13 Aligned_cols=249 Identities=21% Similarity=0.287 Sum_probs=192.5
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.||+|+||+||+|+.. +++.||||++.... ......+..|++++++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~ 84 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 84 (381)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCC
Confidence 4578999999999999875 57899999997542 2234568889999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc-
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS- 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~- 684 (854)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 85 GGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 9999999853 34578888889999999999999998 999999999999999999999999999753211000
Q ss_pred ---------------------------------------------ceeecccccccccCccccccCcCCCcchhhhHHHH
Q 003046 685 ---------------------------------------------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVI 719 (854)
Q Consensus 685 ---------------------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvv 719 (854)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00123469999999999999899999999999999
Q ss_pred HHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHH--ccCCCCCCCCCHHHHH
Q 003046 720 LLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALM--CVLPHGHMRPSISEVL 797 (854)
Q Consensus 720 l~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~--Cl~~~P~~RPsm~eV~ 797 (854)
+|||++|+.||......+....+..|. ..+ . +.+ ....+ .++.+++.+ |...+|..||++.|++
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~------~~~-~-~~~--~~~~s----~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLKVINWE------NTL-H-IPP--QVKLS----PEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHccc------ccc-C-CCC--CCCCC----HHHHHHHHHHccCcccccCCCCHHHHh
Confidence 999999999997654221111111110 000 0 000 01122 235566655 6677777899999999
Q ss_pred HH
Q 003046 798 KD 799 (854)
Q Consensus 798 ~~ 799 (854)
+|
T Consensus 304 ~h 305 (381)
T cd05626 304 AH 305 (381)
T ss_pred cC
Confidence 87
No 114
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.2e-36 Score=345.66 Aligned_cols=253 Identities=24% Similarity=0.333 Sum_probs=201.8
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecC--------
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-------- 595 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-------- 595 (854)
.|.+.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+.++..++|+||+++++.+...+
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~ 112 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVL 112 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccce
Confidence 5567889999999999999865 68999999987543 233456788999999999999999988775432
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
..++||||+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 113 ~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 113 MIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred EEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 36799999999999999976544556788999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCC-cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 676 SKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 676 a~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ .+.
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-------~~~~~~~~-~~~ 261 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-------EEVMHKTL-AGR 261 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHh-cCC
Confidence 98654322 1223345699999999999999999999999999999999999999975441 11111111 111
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... + +......+.+++.+|++.+|++||++.+++++
T Consensus 262 ~~~-----~----~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 262 YDP-----L----PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCC-----C----CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 110 1 11123458899999999999999999999875
No 115
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.8e-35 Score=301.33 Aligned_cols=271 Identities=21% Similarity=0.244 Sum_probs=201.8
Q ss_pred ccccCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeee
Q 003046 515 AHCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYC 591 (854)
Q Consensus 515 ~~~~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~ 591 (854)
..|-+..|.+ ..++|++|.||.||+|+.+ +++.||+|+++..... -.-...+|+.+|.+++|||||.+-.+.
T Consensus 70 ~gCrsv~efe-----~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVV 144 (419)
T KOG0663|consen 70 GGCRSVEEFE-----KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVV 144 (419)
T ss_pred cCcccHHHHH-----HHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEE
Confidence 3444555543 4578999999999999876 6889999999755321 123457899999999999999998887
Q ss_pred ee--cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEE
Q 003046 592 QE--EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAK 669 (854)
Q Consensus 592 ~~--~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~k 669 (854)
.. -+..++|||||+. +|...+... .+++...++..+..|+++|++|||.. .|+|||||++|+|+...|.+|
T Consensus 145 vG~~~d~iy~VMe~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lK 217 (419)
T KOG0663|consen 145 VGSNMDKIYIVMEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILK 217 (419)
T ss_pred eccccceeeeeHHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEE
Confidence 54 3468999999986 888888644 36788888999999999999999999 999999999999999999999
Q ss_pred EEEecccccccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH
Q 003046 670 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL 748 (854)
Q Consensus 670 L~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~ 748 (854)
|+|||+|+.+...... .+..+-|.+|+|||.+.+ ..|+.+.|+||+|||+.||+++++.|.+...-+....+.+-...
T Consensus 218 iaDFGLAR~ygsp~k~-~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGt 296 (419)
T KOG0663|consen 218 IADFGLAREYGSPLKP-YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGT 296 (419)
T ss_pred ecccchhhhhcCCccc-CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCC
Confidence 9999999987665333 344457999999999987 56999999999999999999999999876522111111111100
Q ss_pred hhhcCCcccccC--------------CcccCcCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 HIESGDIQGIID--------------PSLLDEYDIQ-SMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~~~~~~id--------------~~l~~~~~~~-~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .+......-+ ..+...+... ....-.+|....+..||.+|-|+.|-++|
T Consensus 297 P-te~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 297 P-SEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred C-ccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 0 0000000000 0111122111 22456788889999999999999999876
No 116
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.4e-35 Score=312.84 Aligned_cols=258 Identities=26% Similarity=0.377 Sum_probs=207.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++|+|++++++++...+..++||||
T Consensus 4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (267)
T cd08224 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL 83 (267)
T ss_pred eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence 446788999999999999887 78999999886432 22356788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.........+++.++..++.+++.||+|||+. +++||||||+||+++.++.++|+|||+++......
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 999999999865444456688999999999999999999998 99999999999999999999999999987554322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.. .....++..|+|||++.+..++.++|||||||++|||++|+.||.... ..+.+.... ...+....
T Consensus 161 ~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~-~~~~~~~~------ 227 (267)
T cd08224 161 TA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----MNLYSLCKK-IEKCDYPP------ 227 (267)
T ss_pred cc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC-----ccHHHHHhh-hhcCCCCC------
Confidence 21 223458899999999998889999999999999999999999986443 112221111 11111111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.........+.+++.+|+..+|++||++.+|++.|+++
T Consensus 228 --~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 228 --LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred --CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 00112334688999999999999999999999999875
No 117
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=323.73 Aligned_cols=262 Identities=25% Similarity=0.397 Sum_probs=219.0
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEECC---Cc--EEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecC
Q 003046 522 DIEDATKMLEKKIGSGGFGVVYYGKLKD---GK--EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~---~~--~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~ 595 (854)
++.++...+.++||.|-||.||+|.+.+ |+ .||||..+.+. ....+.|..|..+|+.++||||++|+|+|.+.
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~- 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ- 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-
Confidence 4455555667899999999999998642 33 48889888753 45577899999999999999999999999865
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
..++|||.++-|.|.++|.. ....++......++.||+.||+|||+. .+|||||.++|||+...--+||+|||+
T Consensus 464 P~WivmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred ceeEEEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccch
Confidence 57999999999999999963 345688888899999999999999999 999999999999999999999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCC
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
++.+.+......+...-+..|||||.+.-++++.++|||-|||.+||++. |..||.+....+.... +++|+
T Consensus 538 SR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~--------iEnGe 609 (974)
T KOG4257|consen 538 SRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH--------IENGE 609 (974)
T ss_pred hhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE--------ecCCC
Confidence 99988877666666666789999999999999999999999999999987 9999987553322211 12221
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
+...+..+...+..|..+||+.+|.+||.+.|+...|+.++..+
T Consensus 610 ---------RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee 653 (974)
T KOG4257|consen 610 ---------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE 653 (974)
T ss_pred ---------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence 22334556678899999999999999999999999999987643
No 118
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.3e-35 Score=325.94 Aligned_cols=242 Identities=25% Similarity=0.386 Sum_probs=191.3
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.. +++.||||+++... ......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999886 57899999997542 12234456677777764 899999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AK 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cc
Confidence 999998843 34578888999999999999999998 99999999999999999999999999987432221 12
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+.+. ... +.+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~----~~~~~i~----~~~------~~~~~- 217 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE----ELFQSIR----MDN------PCYPR- 217 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH----HHHHHHH----hCC------CCCCc-
Confidence 23456899999999999989999999999999999999999999754421 2222111 110 11111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSIS-EVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~-eV~~~ 799 (854)
.....+.+++.+|++.+|++||++. ++.+|
T Consensus 218 ---~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 218 ---WLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred ---cCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 1223577899999999999999997 66553
No 119
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.4e-35 Score=314.03 Aligned_cols=247 Identities=27% Similarity=0.431 Sum_probs=195.1
Q ss_pred cccccCcEEEEEEEEC---CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 533 KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.||+|+||.||+|.+. .+..||+|++..... ...+.+.+|+.++++++||||+++++++.. ...++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 4899999999999764 355799999875532 234568899999999999999999998864 57899999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee-
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS- 687 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~- 687 (854)
|.+++... ...+++..++.++.|++.||+|||++ +++||||||+|||++.++.+||+|||+++..........
T Consensus 81 L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 99998532 34688999999999999999999998 999999999999999999999999999975543322211
Q ss_pred -ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 688 -SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 688 -~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
....++..|+|||.+....++.++|||||||++||+++ |..||...... .+.. .+..+.. .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~----~~~~~~~---------~ 217 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP----EVMS----FIEQGKR---------L 217 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH----HHHH----HHHCCCC---------C
Confidence 11223578999999988889999999999999999996 99999765411 1111 1111211 1
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..+.....++.+++.+|+..+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11122345678899999999999999999999999864
No 120
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.6e-36 Score=336.35 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=195.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++..++||||+++++++..++..++||||+
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~ 83 (364)
T cd05599 4 ESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYL 83 (364)
T ss_pred eEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCC
Confidence 34678999999999999886 58899999997532 223345778999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 84 PGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 99999999853 34688999999999999999999998 999999999999999999999999999864322110
Q ss_pred c-------------------------------------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCC
Q 003046 685 H-------------------------------------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQ 727 (854)
Q Consensus 685 ~-------------------------------------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~ 727 (854)
. ......||+.|+|||++....++.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0 011245999999999999999999999999999999999999
Q ss_pred cccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 003046 728 EAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS---ISEVLKD 799 (854)
Q Consensus 728 ~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs---m~eV~~~ 799 (854)
.||......+....+..|. ..+ . +. .. ......+.+++.+|+. +|.+|++ +.|+++|
T Consensus 237 ~Pf~~~~~~~~~~~i~~~~------~~~-~-~~----~~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 237 PPFCSDNPQETYRKIINWK------ETL-Q-FP----DE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCHHHHHHHHHcCC------Ccc-C-CC----CC--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 9997654222111121110 000 0 00 00 0112346678888886 8999998 9999886
No 121
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.1e-35 Score=333.24 Aligned_cols=199 Identities=26% Similarity=0.368 Sum_probs=171.2
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||+||+|... +++.||||+++... ......+..|+.++.+++|+||+++++.+.+....++||||+
T Consensus 4 ~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~ 83 (363)
T cd05628 4 ESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFL 83 (363)
T ss_pred eEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCC
Confidence 34678999999999999876 58899999997542 222346778999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 84 PGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 99999999853 45688999999999999999999998 999999999999999999999999999875432110
Q ss_pred ----------------------------------ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccc
Q 003046 685 ----------------------------------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 685 ----------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf 730 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0012346999999999999999999999999999999999999999
Q ss_pred cccc
Q 003046 731 SNEK 734 (854)
Q Consensus 731 ~~~~ 734 (854)
....
T Consensus 237 ~~~~ 240 (363)
T cd05628 237 CSET 240 (363)
T ss_pred CCCC
Confidence 7654
No 122
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.7e-35 Score=320.31 Aligned_cols=250 Identities=26% Similarity=0.356 Sum_probs=199.3
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
...+.||+|+||.||++... +++.||||++..... .....+.+|++++++++||||+++++.+..++..++||||+
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05605 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 82 (285)
T ss_pred eEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEecc
Confidence 34678999999999999875 688999999875422 22345778999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||+++.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 83 NGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred CCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 999999888542 234588999999999999999999998 999999999999999999999999999976533221
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||....... ....+...+....
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~---------- 221 (285)
T cd05605 158 --IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV----KREEVERRVKEDQ---------- 221 (285)
T ss_pred --cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh----HHHHHHHHhhhcc----------
Confidence 123458999999999998899999999999999999999999997644211 1111111111110
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
..+.......+.+++.+|++.||++|| ++++++++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 111122334578999999999999999 88888776
No 123
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.1e-35 Score=333.42 Aligned_cols=251 Identities=22% Similarity=0.284 Sum_probs=194.7
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+.+.||+|+||.||+++.+ +++.+|+|++.... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~E 123 (370)
T cd05621 44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVME 123 (370)
T ss_pred HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEc
Confidence 3455678999999999999987 57899999986432 2234457889999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 y~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 124 YMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred CCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 9999999998842 3477888889999999999999998 9999999999999999999999999999865433
Q ss_pred CcceeecccccccccCccccccC----cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQ----QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~----~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.........||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. ............
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~-------~~~i~~~~~~~~- 267 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT-------YSKIMDHKNSLN- 267 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCCcccC-
Confidence 32233455699999999998754 378899999999999999999999976542111 111111110000
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~ 799 (854)
... .......+.+++..|+..++.+ ||++.|+++|
T Consensus 268 ----~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 ----FPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ----CCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 000 1112345667888888755543 8999999987
No 124
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2e-35 Score=316.58 Aligned_cols=254 Identities=26% Similarity=0.431 Sum_probs=199.7
Q ss_pred hhccccccCcEEEEEEEECC----CcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCe------E
Q 003046 530 LEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------S 597 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~------~ 597 (854)
+.+.||+|+||.||+|.+.. +..||||+++.... .....+.+|+++++.++||||+++++++..... .
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence 56789999999999998752 36799999875422 234578899999999999999999998866554 7
Q ss_pred EEEEEecCCCCHHHhhcccc--cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 598 VLVYEFMHNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
++|+||+++|+|.+++.... .....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCccc
Confidence 99999999999999985432 1234688999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcC
Q 003046 676 SKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 676 a~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||..... ..+.++.. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~----~~~~~~~~----~~ 231 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN----HEIYDYLR----HG 231 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHH----cC
Confidence 98654332221 122335678999999988899999999999999999999 8888865431 12222211 11
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.... .+......+.+++.+|++.+|++||++.||+++|+++
T Consensus 232 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 NRLK---------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCC---------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111 1112334688999999999999999999999999875
No 125
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-35 Score=315.18 Aligned_cols=255 Identities=26% Similarity=0.454 Sum_probs=205.0
Q ss_pred HHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
...+.+.++||+|+||.||+|..++++.||||.+.... ....++.+|+.++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 34556778999999999999998888899999987543 33567899999999999999999999999989999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++... ....+++..+..++.+++.||+|||+. +++|+||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 84 SKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred CCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 999999999643 234688999999999999999999998 999999999999999999999999999876543222
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......++..|+|||.+.+..++.++|||||||+++|+++ |+.||..... ........... ..
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~~~~~~~~~~---~~-------- 223 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN----REVLEQVERGY---RM-------- 223 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcCC---CC--------
Confidence 22222335678999999998899999999999999999999 9999965431 11222111100 00
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..+......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 224 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 --PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0011113468899999999999999999999999875
No 126
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-35 Score=327.48 Aligned_cols=264 Identities=25% Similarity=0.434 Sum_probs=205.9
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEC--------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeee
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQ 592 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~ 592 (854)
+...++.+.+.||+|+||.||+|... .+..||+|+++... .....++.+|+++++++ +||||++++++|.
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 33445677899999999999999753 12368999887542 23346788999999999 7999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCe
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
..+..++++||+++|+|.+++.... .....+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 9999999999999999999986431 1234688999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEEecccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccccc
Q 003046 661 LLDKHMRAKVSDFGLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGAN 738 (854)
Q Consensus 661 Ll~~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~ 738 (854)
|++.++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-- 243 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-- 243 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH--
Confidence 99999999999999997554322111 122234568999999999999999999999999999998 88888654311
Q ss_pred ccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..... +..+...+ ........+.+++.+|++.+|++||+|.|+++.|+++...
T Consensus 244 -----~~~~~-~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 244 -----ELFKL-LKEGHRMD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred -----HHHHH-HHcCCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 11111 11111111 1112234688999999999999999999999999988643
No 127
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1e-35 Score=326.90 Aligned_cols=242 Identities=26% Similarity=0.356 Sum_probs=191.2
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.+ +++.||+|+++... ......+..|..++... +||||+++++++...+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999887 58899999997542 12234556677777754 899999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NR 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cc
Confidence 999988843 34678889999999999999999998 99999999999999999999999999987432221 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+.. ..+. +.+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~----~~~~~~----~~~~------~~~~~~ 218 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED----ELFESI----RVDT------PHYPRW 218 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHH----HhCC------CCCCCC
Confidence 33456999999999999999999999999999999999999999754411 121111 1110 111111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSIS-EVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~-eV~~~ 799 (854)
...++.+++.+|++.||++||++. ++.+|
T Consensus 219 ----~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 219 ----ITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred ----CCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 223577899999999999999984 66644
No 128
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-35 Score=323.69 Aligned_cols=262 Identities=24% Similarity=0.432 Sum_probs=205.0
Q ss_pred HHHHHhhccccccCcEEEEEEEEC--------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeec
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE 594 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~ 594 (854)
...+.+.+.||+|+||.||+|... +...+|+|++.... .....++..|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 345677899999999999999753 23469999987542 23345688899999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE
Q 003046 595 GRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 662 (854)
Q Consensus 595 ~~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl 662 (854)
+..++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 999999999999999999965321 224588999999999999999999998 99999999999999
Q ss_pred cCCCcEEEEEecccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccccccc
Q 003046 663 DKHMRAKVSDFGLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCR 740 (854)
Q Consensus 663 ~~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~ 740 (854)
+.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~---- 249 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---- 249 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH----
Confidence 999999999999987553321111 111224578999999998889999999999999999998 88888654311
Q ss_pred chHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 741 NIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 741 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+.. ....+... ..+......+.+++.+|++.+|++||+|.+|++.|++++..
T Consensus 250 ~~~~----~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 250 ELFK----LLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHH----HHHcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111 11111111 11112234678899999999999999999999999998754
No 129
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=340.64 Aligned_cols=263 Identities=22% Similarity=0.272 Sum_probs=192.7
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeec--------CeE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--------GRS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--------~~~ 597 (854)
.|.+.++||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++... ...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 3556789999999999999875 58899999885432 2345799999999999999999876432 246
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-cEEEEEeccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLS 676 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla 676 (854)
++||||+++ +|.+++.........+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+|
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 789999975 77777754434456788999999999999999999998 999999999999999664 7999999999
Q ss_pred ccccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh------
Q 003046 677 KFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH------ 749 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~------ 749 (854)
+....... .....||+.|+|||++.+ ..++.++|||||||++|||++|..||.+....+....+.+.....
T Consensus 219 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~ 296 (440)
T PTZ00036 219 KNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK 296 (440)
T ss_pred hhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 86543322 223458999999999876 468999999999999999999999997654222111221110000
Q ss_pred -h----hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 -I----ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 -~----~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..-.+..+....+...++......+.+++.+|++.+|.+|||+.|+++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 0000000000111111111223468899999999999999999999877
No 130
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.3e-36 Score=332.89 Aligned_cols=250 Identities=21% Similarity=0.223 Sum_probs=198.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||+||++... +++.||+|+++.... .....+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 83 (330)
T cd05601 4 DVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQ 83 (330)
T ss_pred eEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCC
Confidence 45688999999999999876 688999999975422 23456888999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 84 PGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999998532 24688889999999999999999998 999999999999999999999999999986654433
Q ss_pred ceeecccccccccCccccc------cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 685 HVSSIVRGTVGYLDPEYYI------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~------~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .............
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-------~~~i~~~~~~~~~ 230 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT-------YNNIMNFQRFLKF 230 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH-------HHHHHcCCCccCC
Confidence 3334456999999999987 45678899999999999999999999976542111 1111111111000
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
- . .......+.+++..|++ +|++||++.++++|
T Consensus 231 ~-----~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 231 P-----E--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred C-----C--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0 0 01123457788899998 99999999999876
No 131
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.3e-35 Score=320.58 Aligned_cols=262 Identities=26% Similarity=0.394 Sum_probs=199.0
Q ss_pred HHHhhccccccCcEEEEEEEEC-----CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-----~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~l 599 (854)
.+.+.+.||+|+||.||++..+ +++.||+|++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 3445688999999999999753 578999999876655556678999999999999999999998754 346789
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||+++|+|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 85 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 85 VMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 99999999999998532 34588999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCccee--ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc------c-cc-cchHHHHHHh
Q 003046 680 VDGASHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG------A-NC-RNIVQWAKLH 749 (854)
Q Consensus 680 ~~~~~~~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~------~-~~-~~l~~~~~~~ 749 (854)
........ ....++..|+|||++.+..++.++|||||||+++||++|..++...... . .. ..+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence 44322211 1122445699999999888999999999999999999998765432200 0 00 0000111111
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
...+. ...........+.+++.+|++.+|++||||.||++.|+.+
T Consensus 239 ~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 239 LKNNG---------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HhcCC---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11110 0001112234688999999999999999999999999864
No 132
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-35 Score=327.78 Aligned_cols=243 Identities=23% Similarity=0.327 Sum_probs=191.6
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHh---hhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLL---SRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l---~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.||+|+||.||+|... +++.||||+++... ......+..|++++ +.++||||+++++++...+..++|||
T Consensus 3 i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E 82 (324)
T cd05589 3 CLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVME 82 (324)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEc
Confidence 4578999999999999876 68999999997542 12234456666554 56689999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|...+. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 83 YAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred CCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999988874 34688999999999999999999998 9999999999999999999999999998743222
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. . +..+.. .
T Consensus 155 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~----~~~~---~-i~~~~~------~ 219 (324)
T cd05589 155 G-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE----EVFD---S-IVNDEV------R 219 (324)
T ss_pred C-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH----HHHH---H-HHhCCC------C
Confidence 1 2223456999999999999999999999999999999999999999765421 1111 1 111111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.... ....+.+++.+|++.+|++|| ++.+++++
T Consensus 220 ~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 220 YPRF----LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCCC----CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1111 224577899999999999999 57777665
No 133
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2e-35 Score=316.18 Aligned_cols=253 Identities=25% Similarity=0.434 Sum_probs=200.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CC---cEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DG---KEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~---~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+...+.||+|+||.||+|+.+ ++ ..+|+|.+.... ......+..|++++++++|||++++.+++...+..++|||
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (268)
T cd05063 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITE 86 (268)
T ss_pred ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEE
Confidence 344688999999999999875 23 369999886542 2335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 87 YMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 9999999999853 235688999999999999999999998 9999999999999999999999999998755433
Q ss_pred Ccceee--cccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 683 ASHVSS--IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 683 ~~~~~~--~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
...... ....+..|+|||++....++.++|||||||++|||++ |+.||...... .+.... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~----~~~~~i----~~~~----- 227 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH----EVMKAI----NDGF----- 227 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH----HHHHHH----hcCC-----
Confidence 222111 1223567999999998889999999999999999997 99999654311 111111 1110
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
......+....+.+++.+|++.+|++||+|.+|++.|+++
T Consensus 228 ----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 ----RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0001112335688999999999999999999999999875
No 134
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-35 Score=327.34 Aligned_cols=245 Identities=24% Similarity=0.308 Sum_probs=193.2
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCC-CceeeEeeeeeecCeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHH-RNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~~~~~~lV~e~ 603 (854)
.+.+.||+|+||.||+|+.+ +++.||||++.... ......+..|++++..++| ++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~ 82 (324)
T cd05587 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY 82 (324)
T ss_pred eEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcC
Confidence 45688999999999999876 57889999997542 2234557788999999866 5688899999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 83 VNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 999999988843 34578889999999999999999998 99999999999999999999999999986432221
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+...+ .... ..+
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~i----~~~~------~~~ 220 (324)
T cd05587 156 -KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----ELFQSI----MEHN------VSY 220 (324)
T ss_pred -CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHH----HcCC------CCC
Confidence 1223456999999999999999999999999999999999999999754421 111111 1111 011
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm-----~eV~~~ 799 (854)
... ....+.+++.+|++.+|++||+. .++.+|
T Consensus 221 ~~~----~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 221 PKS----LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCC----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111 22357789999999999999976 566655
No 135
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.8e-35 Score=317.40 Aligned_cols=253 Identities=25% Similarity=0.418 Sum_probs=196.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCc----EEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~----~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+.||+|+||+||+|.+. +++ .+++|.+..... ....++..|+.+++++.||||+++++++.. ...++++|
T Consensus 10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e 88 (279)
T cd05111 10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQ 88 (279)
T ss_pred eeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEE
Confidence 35678999999999999875 344 477777753322 223567788889999999999999998864 45788999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+|||+++++.+||+|||+++.....
T Consensus 89 ~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 89 LSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred eCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 9999999999853 234688999999999999999999998 9999999999999999999999999999865433
Q ss_pred Ccc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 683 ASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 683 ~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
... ......++..|+|||.+.++.++.++|||||||++||+++ |+.||.+.... .+.+. +..+... ..
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~----~~~~~~~--~~ 232 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPDL----LEKGERL--AQ 232 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----HHCCCcC--CC
Confidence 222 2233457789999999999999999999999999999998 99999754411 11121 2222111 11
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+.. +...+.+++.+|+..+|++||++.|+++.|..+..
T Consensus 233 ~~~-------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 233 PQI-------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCC-------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 111 12346788999999999999999999999987643
No 136
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.6e-35 Score=318.85 Aligned_cols=255 Identities=27% Similarity=0.419 Sum_probs=198.9
Q ss_pred HHHhhccccccCcEEEEEEEECC------CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.+.||+|+||.||+|.+.. +..||+|.+.... ......+..|+.++++++|+||+++++++.+.+..++
T Consensus 7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (277)
T cd05036 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI 86 (277)
T ss_pred HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence 34456899999999999998763 5678999876443 2334568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccc---cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC---cEEEEEe
Q 003046 600 VYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDF 673 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~~kL~DF 673 (854)
||||+++++|.+++.... .....+++..++.++.||+.||+|||+. +++||||||+||+++.++ .+||+||
T Consensus 87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEeccC
Confidence 999999999999986432 1223588999999999999999999998 999999999999998764 5999999
Q ss_pred cccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003046 674 GLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++......... ......+..|+|||++.+..++.++|||||||++|||++ |+.||...... .+... ...
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~----~~~~~---~~~ 236 (277)
T cd05036 164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ----EVMEF---VTG 236 (277)
T ss_pred ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH---HHc
Confidence 9998653222111 112223568999999999999999999999999999997 99999765421 12111 111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.... ..+......+.+++.+|++.+|++||++.+|+++|+
T Consensus 237 ~~~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 237 GGRL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCcC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111 111122346889999999999999999999999986
No 137
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-35 Score=321.98 Aligned_cols=264 Identities=23% Similarity=0.428 Sum_probs=206.8
Q ss_pred HHHHHHhhccccccCcEEEEEEEEC--------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeee
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE 593 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~ 593 (854)
....+.+.+.||+|+||.||+|+.. ++..||+|++.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3445567789999999999999742 24579999886442 23356788999999999 89999999999999
Q ss_pred cCeEEEEEEecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeE
Q 003046 594 EGRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 594 ~~~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
.+..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +++||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence 9999999999999999999864321 134578889999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccc
Q 003046 662 LDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANC 739 (854)
Q Consensus 662 l~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~ 739 (854)
++.++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--- 246 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--- 246 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---
Confidence 999999999999999865432222 1222345678999999998889999999999999999998 78888654311
Q ss_pred cchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 740 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.+.. .+..+... ..+......+.+++.+|++.+|++||+|.||++.|++++...
T Consensus 247 -~~~~----~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 247 -ELFK----LLKEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred -HHHH----HHHcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 1111 11111110 011123356888999999999999999999999999987643
No 138
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-35 Score=326.10 Aligned_cols=242 Identities=26% Similarity=0.369 Sum_probs=193.9
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||+||+|..+ +++.||||+++... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999886 57899999997542 22334567788888887 799999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VT 152 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cc
Confidence 999988843 34688999999999999999999998 99999999999999999999999999986432221 12
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..... .
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~----~~~~~----i~~~~~------~---- 214 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED----ELFQS----ILEDEV------R---- 214 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH----HHHHH----HHcCCC------C----
Confidence 23346899999999999999999999999999999999999999754411 11111 111111 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm-----~eV~~~ 799 (854)
++......+.+++.+|++.+|++||++ .+++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 111123457899999999999999999 888765
No 139
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.2e-35 Score=320.93 Aligned_cols=264 Identities=22% Similarity=0.361 Sum_probs=199.9
Q ss_pred HHHHHhhccccccCcEEEEEEEECC---------------CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEe
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKD---------------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFL 588 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~---------------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~ 588 (854)
...+.+.+.||+|+||.||++.... ...||+|+++... ......+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4456677899999999999987642 2358999987542 23345688999999999999999999
Q ss_pred eeeeecCeEEEEEEecCCCCHHHhhccccc--------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCe
Q 003046 589 GYCQEEGRSVLVYEFMHNGTLKEHLYGTLT--------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 589 g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
+++...+..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 999999999999999999999999853211 112468889999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh--CCcccccccccc
Q 003046 661 LLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS--GQEAISNEKFGA 737 (854)
Q Consensus 661 Ll~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt--G~~pf~~~~~~~ 737 (854)
+++.++.+||+|||+++........ ......++..|+|||++.++.++.++|||||||+++||++ |..||......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~- 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE- 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence 9999999999999999754332211 1122345778999999998899999999999999999998 56677654321
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.++................ ..+......+.+++.+|++.+|++||+|.+|++.|+
T Consensus 240 ---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 ---QVIENTGEFFRNQGRQIYL------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ---HHHHHHHHhhhhccccccC------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1222111111111000000 001112246899999999999999999999999886
No 140
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.4e-35 Score=314.93 Aligned_cols=254 Identities=28% Similarity=0.441 Sum_probs=196.7
Q ss_pred hhccccccCcEEEEEEEECCC-c--EEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeEE
Q 003046 530 LEKKIGSGGFGVVYYGKLKDG-K--EIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 598 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~~-~--~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~~ 598 (854)
+.+.||+|+||.||+|++.+. + .||+|.++... ......+.+|+++++.++|+||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 467899999999999987643 2 58999886542 23346788899999999999999999987432 2468
Q ss_pred EEEEecCCCCHHHhhccc-c-cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 599 LVYEFMHNGTLKEHLYGT-L-THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~-~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
+++||+++|+|.+++... . .....+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcc
Confidence 999999999999887422 1 1234588999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCC
Q 003046 677 KFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 677 ~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+......... .....+++.|+|||+..+..++.++|||||||++|||++ |+.||..... ..+.. .+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~----~~~~~~ 231 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN----SEIYD----YLRQGN 231 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH----HHHcCC
Confidence 8654332211 122346778999999999999999999999999999999 7888865331 11211 122221
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
... ........+.+++.+|++.+|++||++.+|++.|+++
T Consensus 232 ~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111 0111234578999999999999999999999999875
No 141
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.2e-35 Score=318.04 Aligned_cols=261 Identities=25% Similarity=0.368 Sum_probs=206.0
Q ss_pred HHHHHhhccccccCcEEEEEEEECC-----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeee-cCeE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-EGRS 597 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~-----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~ 597 (854)
...+.+.+.||+|+||.||+|.+.+ +..|++|++.... ......+.+|+.++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 3455567899999999999998875 6889999886542 2335568889999999999999999998866 4678
Q ss_pred EEEEEecCCCCHHHhhcccccc----cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTH----EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
++++||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998543211 25688999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003046 674 GLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++.+.....+. .....++..|+|||++.+..++.++|||||||++||+++ |+.||..... ..+..+...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~--- 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP----FEMAAYLKD--- 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH----HHHHHHHHc---
Confidence 9998654433222 122346778999999998889999999999999999999 9999975431 122222211
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+. ........+.+++.+|++.+|++||++.||++.|+.+..
T Consensus 235 ~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 235 GYRLA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11110 011123467899999999999999999999999998753
No 142
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.9e-35 Score=312.34 Aligned_cols=253 Identities=20% Similarity=0.322 Sum_probs=198.9
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++...+..++|+||++
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~ 89 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCG 89 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCC
Confidence 4566789999999999999875 688999999875544445568889999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06646 90 GGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA- 161 (267)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence 9999998842 34578889999999999999999998 999999999999999999999999999975532211
Q ss_pred eeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 686 VSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......|+..|+|||.+. ...++.++|||||||++|||++|+.||......+.. .. +..... ..+.
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~---~~-----~~~~~~---~~~~ 230 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL---FL-----MSKSNF---QPPK 230 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh---ee-----eecCCC---CCCC
Confidence 112345889999999884 345788999999999999999999998643311110 00 000000 0011
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
... .......+.+++.+|++.+|++||++++|+++|
T Consensus 231 ~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred Ccc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 110 111234688999999999999999999999875
No 143
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.2e-35 Score=320.00 Aligned_cols=258 Identities=27% Similarity=0.427 Sum_probs=200.4
Q ss_pred HHhhccccccCcEEEEEEEECC-Cc--EEEEEEEecC-CccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD-GK--EIAVKVLTSN-SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~-~~--~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|..++ +. .+++|.++.. .....+.+.+|++++.++ +||||+++++++...+..++|+|
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 83 (297)
T cd05089 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE 83 (297)
T ss_pred ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence 4467889999999999998763 33 4788887643 223345788999999999 79999999999999999999999
Q ss_pred ecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEE
Q 003046 603 FMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL 670 (854)
|+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEE
Confidence 9999999999854211 123588899999999999999999998 9999999999999999999999
Q ss_pred EEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003046 671 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||...... .+...
T Consensus 161 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~----~~~~~---- 230 (297)
T cd05089 161 ADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA----ELYEK---- 230 (297)
T ss_pred CCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----
Confidence 9999986322111 1111223567999999998899999999999999999997 99999755421 11111
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
...+. .. ..+......+.+++.+|++.+|.+||++.+|++.|+.++...
T Consensus 231 ~~~~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 231 LPQGY-----RM----EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HhcCC-----CC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11110 00 011112245789999999999999999999999999887654
No 144
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-35 Score=327.28 Aligned_cols=242 Identities=28% Similarity=0.362 Sum_probs=189.6
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHH-HhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVT-LLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||+||+|+.. +++.||||++..... .....+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999886 689999999875421 12233444444 56789999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (323)
T cd05575 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KT 152 (323)
T ss_pred CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Cc
Confidence 99998884 345678888999999999999999998 99999999999999999999999999987432221 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ + ..... .+.. .+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----~---~~~i~-~~~~------~~~~~ 218 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE----M---YDNIL-NKPL------RLKPN 218 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH----H---HHHHH-cCCC------CCCCC
Confidence 334569999999999999999999999999999999999999997644211 1 11111 1111 11111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHH----HHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSIS----EVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~----eV~~~ 799 (854)
. ...+.+++.+|++.+|++||++. |++++
T Consensus 219 ~----~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 219 I----SVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred C----CHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 1 34578899999999999999884 55543
No 145
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.9e-35 Score=317.75 Aligned_cols=257 Identities=25% Similarity=0.427 Sum_probs=203.3
Q ss_pred HHHHHhhccccccCcEEEEEEEECC------CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 597 (854)
...+.+.+.||+|+||.||+|..+. +..||+|.+.... ......+.+|+++++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3445567899999999999998752 3689999986543 23345688999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhcccccc------cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEE
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTH------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 671 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~ 671 (854)
++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 9999999999999998653321 23478889999999999999999998 99999999999999999999999
Q ss_pred EecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003046 672 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 672 DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|||+++....... .......++..|+|||.+.+..++.++|||||||++||+++ |..||..... ..+..+..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~~~~-- 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN----EEVLKFVI-- 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH----HHHHHHHh--
Confidence 9999875543321 11223346789999999988889999999999999999998 9999865431 12222211
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.+.... . +......+.+++.+|++.+|++|||+.++++.|+
T Consensus 236 --~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 --DGGHLD-----L----PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred --cCCCCC-----C----CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111 1 1112456889999999999999999999999886
No 146
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.8e-35 Score=313.90 Aligned_cols=251 Identities=27% Similarity=0.450 Sum_probs=195.8
Q ss_pred ccccccCcEEEEEEEECC-Cc--EEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLKD-GK--EIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~-~~--~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|++++ +. .+|+|.++... ......+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998864 43 46888876432 33345788999999999 899999999999999999999999999
Q ss_pred CCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEec
Q 003046 607 GTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 607 gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFG 674 (854)
|+|.+++.... .....+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 99999986432 1123578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcC
Q 003046 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
+++..... ........+..|+|||++....++.++|||||||++|||++ |..||...... .+... ...+
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~~~----~~~~ 227 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEK----LPQG 227 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH----HHHHH----HhCC
Confidence 98532211 11111224667999999988889999999999999999997 99999654321 11111 1111
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
...+ ........+.+++.+|++.+|.+||++.|+++.|++++
T Consensus 228 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 YRLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCC---------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1000 01112245789999999999999999999999999875
No 147
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.9e-35 Score=323.10 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=194.9
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.. +++.||+|+++.... .....+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999876 578999999975422 2234577899998888 699999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (327)
T cd05617 81 GDLMFHMQ----RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DT 152 (327)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cc
Confidence 99998874 335688999999999999999999998 99999999999999999999999999987432221 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+.......... .+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~------~~--- 222 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD-MNTEDYLFQVILEKPI------RI--- 222 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc-cccHHHHHHHHHhCCC------CC---
Confidence 2345699999999999999999999999999999999999999964321111 1122222222222111 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPS------ISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPs------m~eV~~~ 799 (854)
+......+.+++.+|++.||++||+ +.++.+|
T Consensus 223 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 223 -PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred -CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 1111235678999999999999998 4577665
No 148
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.3e-35 Score=318.75 Aligned_cols=264 Identities=23% Similarity=0.384 Sum_probs=200.8
Q ss_pred HHHHhhccccccCcEEEEEEEEC-----------------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-----------------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQF 587 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-----------------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l 587 (854)
..+.+.++||+|+||.||++... ++..||+|++.... .....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 34567789999999999998543 23468999987543 2334678999999999999999999
Q ss_pred eeeeeecCeEEEEEEecCCCCHHHhhccccc-------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCe
Q 003046 588 LGYCQEEGRSVLVYEFMHNGTLKEHLYGTLT-------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 588 ~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
++++...+..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 9999999999999999999999999864321 123478889999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEEecccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh--CCcccccccccc
Q 003046 661 LLDKHMRAKVSDFGLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS--GQEAISNEKFGA 737 (854)
Q Consensus 661 Ll~~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt--G~~pf~~~~~~~ 737 (854)
|++.++.++|+|||+++......... .....++..|+|||...++.++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999997554332211 122234678999999888899999999999999999998 677886543221
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
++................ +. +..+...+.+++.+|++.+|++||+|.||++.|++
T Consensus 242 ----~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 ----VIENTGEFFRDQGRQVYL-PK-----PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ----HHHHHHHHHhhccccccC-CC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111111111111000000 00 11123568899999999999999999999998863
No 149
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3e-35 Score=321.26 Aligned_cols=259 Identities=27% Similarity=0.439 Sum_probs=200.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCc--EEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGK--EIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~--~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|.++ ++. .+|+|.++... ......+.+|++++.++ +||||+++++++..++..++||
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 87 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 87 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEE
Confidence 3456789999999999999875 344 45777765432 23446788899999999 8999999999999999999999
Q ss_pred EecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEE
Q 003046 602 EFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAK 669 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~k 669 (854)
||+++|+|.+++.... .....+++.+++.++.|++.||+|||+. +++||||||+|||++.++.+|
T Consensus 88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 88 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcEE
Confidence 9999999999986432 1123578999999999999999999998 999999999999999999999
Q ss_pred EEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHH
Q 003046 670 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKL 748 (854)
Q Consensus 670 L~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~ 748 (854)
|+|||+++..... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... .....
T Consensus 165 l~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~--- 235 (303)
T cd05088 165 IADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEK--- 235 (303)
T ss_pred eCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH----HHHHH---
Confidence 9999998632111 11111224678999999988889999999999999999998 99999654421 11111
Q ss_pred hhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 749 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 749 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
...+.. ..........+.+++.+|++.+|++||++.+++++|+.++...
T Consensus 236 -~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 236 -LPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred -HhcCCc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111100 0011112235789999999999999999999999999876544
No 150
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4e-35 Score=318.59 Aligned_cols=262 Identities=26% Similarity=0.400 Sum_probs=203.1
Q ss_pred HHHhhccccccCcEEEEEEEECC-----------------CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD-----------------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFL 588 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~-----------------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~ 588 (854)
.+.+.+.||+|+||.||+|...+ +..||+|++.... ......+.+|++++++++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 45567899999999999997652 2458999987543 23456788999999999999999999
Q ss_pred eeeeecCeEEEEEEecCCCCHHHhhccccc-------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeE
Q 003046 589 GYCQEEGRSVLVYEFMHNGTLKEHLYGTLT-------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 589 g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
+++..++..++|+||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nil 162 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCL 162 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhcee
Confidence 999999999999999999999999864321 123688999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh--CCccccccccccc
Q 003046 662 LDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS--GQEAISNEKFGAN 738 (854)
Q Consensus 662 l~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt--G~~pf~~~~~~~~ 738 (854)
++.++.++|+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--- 239 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD--- 239 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh---
Confidence 99999999999999875433221 12233446789999999998899999999999999999998 6677765431
Q ss_pred ccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
..+.................+ .+......+.+++.+|++.+|++||++.||++.|+
T Consensus 240 -~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 -QQVIENAGHFFRDDGRQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -HHHHHHHHhccccccccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 122222222211111111111 11112346899999999999999999999999886
No 151
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3e-35 Score=313.60 Aligned_cols=254 Identities=24% Similarity=0.400 Sum_probs=203.4
Q ss_pred HHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
...+.+.++||+|+||.||+|...++..+|+|.+.... .....+.+|++++++++|+||+++.+++.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 34566788999999999999998878889999886432 234678899999999999999999999887 7789999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 83 AKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred CCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 999999998643 244678889999999999999999998 999999999999999999999999999876543322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......++..|+|||++....++.++|||||||+++|+++ |+.||...... .+..+. ..+....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~~~----~~~~~~~------ 223 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRAL----ERGYRMP------ 223 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH----HHHHHH----hCCCCCC------
Confidence 22223345678999999998889999999999999999999 89999754311 122221 1111100
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 224 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 ---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011223458899999999999999999999999875
No 152
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.7e-35 Score=310.57 Aligned_cols=248 Identities=25% Similarity=0.405 Sum_probs=201.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|++|.||+|..+ +++.|++|.+... .......+.+|++++++++|||++++++++...+..++||||++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd08529 3 EILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAE 82 (256)
T ss_pred eEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCC
Confidence 34578999999999999876 6889999998643 23345678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++........
T Consensus 83 ~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 83 NGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 99999998643 235688899999999999999999998 9999999999999999999999999998765443222
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... .+... ...+...
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~----~~~~~~~--------- 219 (256)
T cd08529 158 -ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG----ALILK----IIRGVFP--------- 219 (256)
T ss_pred -hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----HHcCCCC---------
Confidence 23345889999999999999999999999999999999999999754411 11111 1111111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.........+.+++.+|++.+|++||+|.+++++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1111233468899999999999999999999875
No 153
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.1e-36 Score=328.48 Aligned_cols=238 Identities=26% Similarity=0.356 Sum_probs=190.9
Q ss_pred ccccccCcEEEEEEEE----CCCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 532 KKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~----~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 2578999999975422 223456789999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence 9999998843 44688999999999999999999998 999999999999999999999999999875443322
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .... . +..... .+..
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~----~~~~---~-i~~~~~------~~p~ 219 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK----ETMT---M-ILKAKL------GMPQ 219 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH----HHHH---H-HHcCCC------CCCC
Confidence 223456899999999999888999999999999999999999999754311 1111 1 111111 0111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISE 795 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e 795 (854)
. ....+.+++.+|++.+|++||++.+
T Consensus 220 ~----~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 220 F----LSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred C----CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1 2235778999999999999999544
No 154
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.7e-35 Score=326.27 Aligned_cols=263 Identities=27% Similarity=0.431 Sum_probs=201.6
Q ss_pred HHHHHHhhccccccCcEEEEEEEE------CCCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeeec-
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE- 594 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~- 594 (854)
....+.+.+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|+.++.++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 345677889999999999999974 2467899999975432 2345678899999999 789999999988654
Q ss_pred CeEEEEEEecCCCCHHHhhccccc--------------------------------------------------------
Q 003046 595 GRSVLVYEFMHNGTLKEHLYGTLT-------------------------------------------------------- 618 (854)
Q Consensus 595 ~~~~lV~e~~~~gsL~~~L~~~~~-------------------------------------------------------- 618 (854)
...++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 467899999999999999854210
Q ss_pred -------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc-eeecc
Q 003046 619 -------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH-VSSIV 690 (854)
Q Consensus 619 -------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~ 690 (854)
....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 012467888899999999999999998 9999999999999999999999999999764332221 11223
Q ss_pred cccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 691 RGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 691 ~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
.++..|+|||.+.+..++.++|||||||++|||++ |..||....... .+. ....++..... + ..
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~~~~~--~---~~--- 306 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFC----RRLKEGTRMRA--P---DY--- 306 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH---HHH----HHHhccCCCCC--C---CC---
Confidence 45678999999999899999999999999999997 899986543111 111 11112211100 0 01
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....+.+++..|++.+|++||++.||+++|+.++.
T Consensus 307 -~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 307 -TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred -CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 12357899999999999999999999999998764
No 155
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.2e-35 Score=310.62 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=197.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-----cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-----QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
+.+.+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++..++..++|+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM 83 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence 345689999999999999865 689999999864321 12346788999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||+++....
T Consensus 84 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 84 EYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999998843 34577888899999999999999998 999999999999999999999999999875433
Q ss_pred CCccee--ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GASHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
...... ....|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ..... ..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~---~~~~~-~~--- 225 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFK---IATQP-TN--- 225 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHH---HhccC-CC---
Confidence 221111 2345788999999999988999999999999999999999999654311 01111 11110 00
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+......+.+++.+|+..+|.+||++.|++++
T Consensus 226 -----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 -----PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11111223457889999999999999999999876
No 156
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=307.87 Aligned_cols=258 Identities=24% Similarity=0.353 Sum_probs=195.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEec--CCccchhchHHHHHHhhhcCCCceeeEeeeeee-----cCeEEEEEE
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTS--NSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-----EGRSVLVYE 602 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-----~~~~~lV~e 602 (854)
.+.||+|+||.|+.|..+ +|+.||||++.. ......+...+|+.+|+.++|+||+.+.+.+.. -+..++|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 478999999999999876 689999999863 233445667889999999999999999999865 346799999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
+|+ .+|...++ .++.+.......++.|+++||.|+|+. +|+|||+||+|+|++.+...||+|||+|+.....
T Consensus 107 lMe-tDL~~iik----~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 107 LME-TDLHQIIK----SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred HHh-hHHHHHHH----cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeecccc
Confidence 994 57877773 445588889999999999999999998 9999999999999999999999999999976432
Q ss_pred -CcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH----------------
Q 003046 683 -ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ---------------- 744 (854)
Q Consensus 683 -~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~---------------- 744 (854)
.....+....|.+|.|||++.. ..|+.+.||||.|||+.||++|++.|.+.+.-.-.+.+.+
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence 2223355568999999999864 6899999999999999999999999987552111100100
Q ss_pred HHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 745 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 745 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.++..++.- ...-...+...++ ......++|+.+|+..||.+|+|++|.++|
T Consensus 259 ~ar~yi~sl--p~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 259 KARPYIKSL--PQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHhC--CCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 011111100 0000000000111 223457899999999999999999999987
No 157
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.5e-35 Score=315.75 Aligned_cols=254 Identities=26% Similarity=0.477 Sum_probs=201.0
Q ss_pred HHHhhccccccCcEEEEEEEECC-C---cEEEEEEEecC-CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD-G---KEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~-~---~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|.++. + ..||||++... ......+|..|+.++++++||||+++++++..+...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 34567899999999999998763 3 36999998754 2333567899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 85 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 85 EFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred ecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999998532 34688999999999999999999998 999999999999999999999999999876543
Q ss_pred CCccee--eccc--ccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 682 GASHVS--SIVR--GTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 682 ~~~~~~--~~~~--gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
...... .... .+..|+|||++.+..++.++|||||||++||+++ |..||..... ..+..++.. .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~----~~~~~~i~~---~~~~~ 231 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----QDVINAIEQ---DYRLP 231 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH----HHHHHHHHc---CCcCC
Confidence 322111 1111 2457999999999999999999999999999886 9999965431 122222211 00000
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
...+....+.+++..|++.+|++||+|.+|++.|+++
T Consensus 232 ----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 ----------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0112234578999999999999999999999999875
No 158
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.6e-35 Score=317.83 Aligned_cols=254 Identities=26% Similarity=0.426 Sum_probs=200.7
Q ss_pred HHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
+.+.++||+|+||.||++... ++..+|+|.+..........+.+|+++++.++|+||+++++++...+..+++|
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (280)
T cd05092 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVF 86 (280)
T ss_pred ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEE
Confidence 345789999999999999642 35678999887655555678999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhccccc-----------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEE
Q 003046 602 EFMHNGTLKEHLYGTLT-----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL 670 (854)
||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+|||+++++.+||
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~kL 163 (280)
T cd05092 87 EYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVVKI 163 (280)
T ss_pred ecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCEEE
Confidence 99999999999864321 123588999999999999999999998 9999999999999999999999
Q ss_pred EEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHH
Q 003046 671 SDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKL 748 (854)
Q Consensus 671 ~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~ 748 (854)
+|||+++........ ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 164 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~--- 236 (280)
T cd05092 164 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT----EAIEC--- 236 (280)
T ss_pred CCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH----HHHHH---
Confidence 999998754332211 1122335788999999999999999999999999999998 89998654311 11111
Q ss_pred hhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 749 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 749 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
...+.... .+......+.+++.+|++.+|++||++.||.+.|+
T Consensus 237 -~~~~~~~~---------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 -ITQGRELE---------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HHcCccCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11111000 01112245789999999999999999999999886
No 159
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.7e-35 Score=334.00 Aligned_cols=248 Identities=21% Similarity=0.269 Sum_probs=189.4
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.++||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++.+.+.+..++||||++
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 84 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence 4678999999999999875 57899999987542 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC--
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-- 683 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~-- 683 (854)
+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 85 gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 85 GGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 9999998853 34577888889999999999999998 99999999999999999999999999975221000
Q ss_pred --------------------------------------------cceeecccccccccCccccccCcCCCcchhhhHHHH
Q 003046 684 --------------------------------------------SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVI 719 (854)
Q Consensus 684 --------------------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvv 719 (854)
........||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000122469999999999999999999999999999
Q ss_pred HHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCC---HHHH
Q 003046 720 LLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS---ISEV 796 (854)
Q Consensus 720 l~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs---m~eV 796 (854)
+|||++|+.||......+....+..|. .... .+. ....+ ..+.+++.+++ .+|++|++ +.|+
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~------~~~~---~p~-~~~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei 302 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQ------TSLH---IPP-QAKLS----PEASDLIIKLC-RGPEDRLGKNGADEI 302 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccC------CCcC---CCC-cccCC----HHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence 999999999997654211111111110 0000 000 01112 23455555554 48999997 8888
Q ss_pred HHH
Q 003046 797 LKD 799 (854)
Q Consensus 797 ~~~ 799 (854)
++|
T Consensus 303 ~~h 305 (382)
T cd05625 303 KAH 305 (382)
T ss_pred hcC
Confidence 876
No 160
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-35 Score=322.88 Aligned_cols=251 Identities=28% Similarity=0.397 Sum_probs=209.9
Q ss_pred HHHHHhhccccccCcEEEEEEEECC-CcEEEEEEEecCCccc---hhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQG---KREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~---~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~l 599 (854)
...|.+.+.||+|.||.||+++.+. |+.+|+|++.+..... ...+.+|+++|+++. ||||+.+.+++......++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3455667899999999999999885 9999999998765433 358899999999998 9999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC----CcEEEEEecc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH----MRAKVSDFGL 675 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~----~~~kL~DFGl 675 (854)
|||++.||.|.+.+... .+++..+..++.|++.++.|||+. +|+||||||+|+|+... +.+|++|||+
T Consensus 114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 99999999999998544 388999999999999999999998 99999999999999643 5799999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
|..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||.+....+... .+..+++
T Consensus 186 a~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--------~i~~~~~ 255 (382)
T KOG0032|consen 186 AKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--------AILRGDF 255 (382)
T ss_pred ceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--------HHHcCCC
Confidence 987765 445667789999999999999999999999999999999999999998776332222 1222222
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......-......+.+++..|+..||.+|+++.++++|
T Consensus 256 ------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 ------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11112222234467899999999999999999999996
No 161
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=307.57 Aligned_cols=261 Identities=23% Similarity=0.377 Sum_probs=197.5
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhc--CCCceeeEeeeeeecC----eEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI--HHRNLVQFLGYCQEEG----RSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l--~HpnIv~l~g~~~~~~----~~~lV~e 602 (854)
.+.+.||+|.||.||+|+|+ |+.||||++... +++.+.+|.++++.+ +|+||+.+++.-..+. .++||.+
T Consensus 214 ~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd 289 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD 289 (513)
T ss_pred EEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence 45688999999999999998 999999998643 356677888888765 9999999999876543 5799999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHh-----CCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-----GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
|.+.|||.|||. ...++....++++..+|.||+|||. +..|.|.|||||+.||||..++.+.|+|+|||.
T Consensus 290 YHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 290 YHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred cccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 999999999994 3568888999999999999999996 345899999999999999999999999999997
Q ss_pred cccCCCcc---eeecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhC----------Cccccccccccc
Q 003046 678 FAVDGASH---VSSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEKFGAN 738 (854)
Q Consensus 678 ~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwS~Gvvl~elltG----------~~pf~~~~~~~~ 738 (854)
........ .....+||.+|||||++... .-...+||||||.|+||+... +.||.+.-..+-
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 55443222 23456799999999998642 122468999999999999864 244432110000
Q ss_pred ccchHHHHHHhhhcCCcccccCCcccC-cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 739 CRNIVQWAKLHIESGDIQGIIDPSLLD-EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
++-+ .+..+-..+ +-|.+.. -.+.+.+..+.+++..||..+|..|-|+-.|.+.|.++..
T Consensus 445 --s~ee-MrkVVCv~~----~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 --SFEE-MRKVVCVQK----LRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred --CHHH-Hhcceeecc----cCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 0000 000000011 1111111 1245788899999999999999999999999999998764
No 162
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.5e-35 Score=333.86 Aligned_cols=249 Identities=25% Similarity=0.328 Sum_probs=193.0
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.++||+|+||.||+++.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~ 83 (377)
T cd05629 4 HTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFL 83 (377)
T ss_pred eEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCC
Confidence 35688999999999999876 68899999986532 222356788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 84 PGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 99999998853 34678888889999999999999998 999999999999999999999999999863211000
Q ss_pred c----------------------------------------------eeecccccccccCccccccCcCCCcchhhhHHH
Q 003046 685 H----------------------------------------------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGV 718 (854)
Q Consensus 685 ~----------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gv 718 (854)
. ......||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 001245999999999999999999999999999
Q ss_pred HHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCC---CCCHHH
Q 003046 719 ILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHM---RPSISE 795 (854)
Q Consensus 719 vl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~---RPsm~e 795 (854)
++|||++|+.||......+....+..|.. .+ . +... ......+.+++.+|+. +|.+ ||++.|
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~------~~-~-----~p~~--~~~s~~~~dli~~lL~-~~~~r~~r~~~~~ 301 (377)
T cd05629 237 IMFECLIGWPPFCSENSHETYRKIINWRE------TL-Y-----FPDD--IHLSVEAEDLIRRLIT-NAENRLGRGGAHE 301 (377)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHccCC------cc-C-----CCCC--CCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence 99999999999976542221112222100 00 0 0000 0112357788889997 6665 569999
Q ss_pred HHHH
Q 003046 796 VLKD 799 (854)
Q Consensus 796 V~~~ 799 (854)
+++|
T Consensus 302 ~l~h 305 (377)
T cd05629 302 IKSH 305 (377)
T ss_pred HhcC
Confidence 9987
No 163
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.5e-35 Score=324.90 Aligned_cols=245 Identities=24% Similarity=0.308 Sum_probs=193.4
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
.+.+.||+|+||.||+|+.. +++.||||++..... .....+..|..++..+ +|++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~ 82 (323)
T cd05616 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEY 82 (323)
T ss_pred eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcC
Confidence 35678999999999999877 578999999875422 2233456677887777 589999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 83 VNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999988843 34578889999999999999999998 99999999999999999999999999987433221
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+. ....
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~----~~~~~i~----~~~~-------- 218 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQSIM----EHNV-------- 218 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH----HHHHHHH----hCCC--------
Confidence 2223456999999999999999999999999999999999999999765421 1222111 1111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm-----~eV~~~ 799 (854)
.++......+.+++.+|++.+|++|++. .++.+|
T Consensus 219 --~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 219 --AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred --CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 0111123457899999999999999984 666654
No 164
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.8e-35 Score=311.65 Aligned_cols=250 Identities=30% Similarity=0.537 Sum_probs=200.5
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|.+.+++.+|+|++.... ....++.+|++++++++|||++++++++......++|+||++++
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHG 84 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCC
Confidence 34568899999999999998778899999886443 23457889999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 85 ~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 85 CLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred cHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 999988532 34578889999999999999999998 999999999999999999999999999875543322222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++.+|+|||++.++.++.++|||||||++|||++ |+.||..... ..+.+. ...+. ....+..
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~~~~----~~~~~--~~~~~~~--- 225 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN----SEVVET----INAGF--RLYKPRL--- 225 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH----HHHHHH----HhCCC--CCCCCCC---
Confidence 22335678999999998899999999999999999998 9999875431 112221 11110 1111111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
....+.+++.+|++.+|++||++.||+++|.
T Consensus 226 ----~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ----ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ----CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1246889999999999999999999999873
No 165
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.1e-34 Score=312.42 Aligned_cols=248 Identities=23% Similarity=0.348 Sum_probs=193.5
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
||+|+||.||+++.+ +|+.||+|++..... .....+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999876 589999999864321 2234556799999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~ 153 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQ 153 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeec
Confidence 9888532 234578889999999999999999998 99999999999999999999999999987654322 2233
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..|+..|+|||++.+..++.++||||+||++|||++|+.||........ ......... .... ... ..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~---~~~~~~~~~-~~~~----~~~-~~---- 220 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA---KEELKRRTL-EDEV----KFE-HQ---- 220 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh---HHHHHHHhh-cccc----ccc-cc----
Confidence 4689999999999988899999999999999999999999965331111 111111111 1111 000 01
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
....++.+++.+|++.+|++||++.|+++.+.
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 12335789999999999999999977664433
No 166
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.5e-35 Score=309.83 Aligned_cols=247 Identities=30% Similarity=0.438 Sum_probs=196.8
Q ss_pred ccccccCcEEEEEEEECC----CcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
++||+|+||.||+|.+.. +..+|+|.+..... ...+++.+|+++++.+.||||+++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 479999999999997642 26899999875543 245678899999999999999999998764 467999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ...+++..+..++.|++.||+|||.. +++||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 999999953 23688999999999999999999998 99999999999999999999999999998654433222
Q ss_pred ee--cccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 687 SS--IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 687 ~~--~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.. ...++..|+|||.+.+..++.++|||||||++|||++ |..||..... ..+..+.. .+....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~----~~~~~~~~----~~~~~~------ 218 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG----AEVIAMLE----SGERLP------ 218 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH----HHHHHHHH----cCCcCC------
Confidence 11 1223568999999999999999999999999999998 9999975441 12222221 111100
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.+......+.+++.+|+..+|++||++.+|++.|+++
T Consensus 219 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 219 ---RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1111234688999999999999999999999999875
No 167
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.4e-35 Score=319.75 Aligned_cols=257 Identities=25% Similarity=0.394 Sum_probs=202.3
Q ss_pred HHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~ 597 (854)
..+.+.+.||+|+||.||+|... .+..||||+++... ......+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 34556789999999999999752 35579999987543 22345688999999999 799999999999999999
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+.+|+|.+++.... ...+++.++..++.|++.||+|||+. +|+|+||||+|||++.++.+||+|||+++
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999985422 23378999999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCc
Q 003046 678 FAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 678 ~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||......+. +.. ....+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~---~~~----~~~~~~~ 262 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK---FYK----LIKEGYR 262 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH---HHH----HHHcCCc
Confidence 55433221 1122345788999999999999999999999999999998 9999875442111 111 1111110
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
. .........+.+++.+|+..+|++||++.||++.|+++
T Consensus 263 ~---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 M---------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 00111224688999999999999999999999999874
No 168
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4e-35 Score=313.86 Aligned_cols=254 Identities=26% Similarity=0.450 Sum_probs=201.6
Q ss_pred HHHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|.+. .+..+|+|.++... ......+..|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 4456789999999999999864 23479999886543 223467889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++++|.+++... ...+++.++..++.|++.||+|||+. +++||||||+|||++.++.++|+|||+++....
T Consensus 85 e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 85 EYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999998532 34578999999999999999999998 999999999999999999999999999986554
Q ss_pred CCcceeec--ccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 682 GASHVSSI--VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 682 ~~~~~~~~--~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
........ ..++..|+|||++.+..++.++|||||||++||+++ |..||...... .+.... .++.-
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~----~~~~~~----~~~~~--- 227 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ----DVIKAI----EEGYR--- 227 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH----HHHHHH----hCCCc---
Confidence 33222221 223568999999998899999999999999999887 99998754411 122221 11100
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
. .........+.+++.+|++.+|.+||+|.+|++.|+++
T Consensus 228 --~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 --L----PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --C----CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 00111234578999999999999999999999999875
No 169
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.4e-35 Score=317.06 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=200.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
++.+.+.||+|+||.||+|... +++.||+|.+..........+.+|+.+++.++|+||+++++.+......++||||++
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~ 100 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccC
Confidence 3445678999999999999865 688999999876655556778899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 101 ~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 101 GGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred CCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 9999998842 3478889999999999999999998 9999999999999999999999999998754332211
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ..+.. ....+. .. +
T Consensus 173 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~---~~~~~----~~~~~~-~~-----~-- 236 (296)
T cd06654 173 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL---RALYL----IATNGT-PE-----L-- 236 (296)
T ss_pred -cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH---HhHHH----HhcCCC-CC-----C--
Confidence 22345889999999999888999999999999999999999999654311 11111 111110 00 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+.+++.+|+..+|++||++.||+++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0111223457889999999999999999999985
No 170
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.3e-35 Score=330.46 Aligned_cols=260 Identities=23% Similarity=0.313 Sum_probs=195.4
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecC-----eEEEEE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-----RSVLVY 601 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-----~~~lV~ 601 (854)
+.+.||+|+||.||+|... +++.||||++... .....+.+.+|+++++.++||||+++++++...+ ..++|+
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 4678999999999999875 6899999998643 2223456889999999999999999999998776 789999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+. ++|.+.+. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 84 e~~~-~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 84 ELMQ-SDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred eccc-cCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9997 57777763 345688999999999999999999998 999999999999999999999999999986543
Q ss_pred CCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH---------------H
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ---------------W 745 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~---------------~ 745 (854)
..........+|+.|+|||++.+. .++.++||||+||++|||++|+.||...........+.+ .
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 333333344588999999998874 478999999999999999999999976542111111111 0
Q ss_pred HHHhhhcCCc-ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 746 AKLHIESGDI-QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 746 ~~~~~~~~~~-~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+..... ..... .+. .........+.+++.+|++.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 236 ARAHILRGPHKPPSLP-VLY-TLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHhCCCCCCchH-Hhc-ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 1111100000 00000 000 0011123457899999999999999999999886
No 171
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.7e-35 Score=310.40 Aligned_cols=248 Identities=30% Similarity=0.471 Sum_probs=202.1
Q ss_pred HHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.+.||+|+||.||+|... ++.||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 3456789999999999999876 88999999976543 456788999999999999999999999989999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 85 ~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 85 GSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999998543 223688999999999999999999998 999999999999999999999999999976532221
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
...++..|+|||++..+.++.++||||||+++||+++ |+.||..... ..+.... ..+...
T Consensus 158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~----~~~~~~--------- 218 (256)
T cd05039 158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVVPHV----EKGYRM--------- 218 (256)
T ss_pred --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHH----hcCCCC---------
Confidence 2235678999999998899999999999999999997 9999865431 1222211 111100
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..+......+.+++.+|+..+|++||++.|++++|+.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0011123468899999999999999999999999975
No 172
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=299.22 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=201.3
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
.+.+.+.||+|+|+.||+..+. +|+..|+|++... ...+.+++++|++|-+.++||||++|.+.....+..++|+|+
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 4556788999999999998765 6899999987543 334567889999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEEEEeccccccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAV 680 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL~DFGla~~~~ 680 (854)
|.|++|..-+- .....++..+-..+.||+.+|.|+|.+ +|||||+||+|+|+.. ...+||+|||+|....
T Consensus 92 m~G~dl~~eIV----~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 92 VTGGELFEDIV----AREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 99999976663 224467777788999999999999999 9999999999999964 3469999999998766
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.........|||+|||||++...+|+..+|||+.|||||-|+.|..||.+.+....++.+.. +.. -++
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~--------g~y--d~~ 232 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKA--------GAY--DYP 232 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhc--------ccc--CCC
Confidence 33444566799999999999999999999999999999999999999987653332222221 211 122
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+...+... ++..+|+.+|+..||++|.|+.|.+.|
T Consensus 233 ~~~w~~is----~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 233 SPEWDTVT----PEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CcccCcCC----HHHHHHHHHHhccChhhhccHHHHhCC
Confidence 22222222 346789999999999999999987754
No 173
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.4e-35 Score=310.05 Aligned_cols=248 Identities=27% Similarity=0.410 Sum_probs=199.1
Q ss_pred ccccccCcEEEEEEEECC--C--cEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLKD--G--KEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~--~--~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|++|.||+|.+.+ + ..||||.+..... ...+.+..|++++++++||||+++++++.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998753 2 3689999987655 456788999999999999999999999988 889999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++..... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999865321 4689999999999999999999998 99999999999999999999999999998664432221
Q ss_pred --eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 687 --SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 687 --~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...+.. .+..... ......
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~~---~~~~~~------- 220 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS----QILKKID---KEGERL------- 220 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH---hcCCcC-------
Confidence 122457789999999999899999999999999999999 99999654311 1111111 111100
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
..+......+.+++.+|++.+|++||++.+|++.|.
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 --ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 001112346889999999999999999999999885
No 174
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.2e-35 Score=334.47 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=192.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+++|++++||||+++++.+..++..++||||+
T Consensus 4 ~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~ 83 (376)
T cd05598 4 VKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 83 (376)
T ss_pred eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCC
Confidence 45678999999999999876 58899999986532 123455788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC--
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG-- 682 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~-- 682 (854)
++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|......
T Consensus 84 ~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 84 PGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 99999999853 34577888888999999999999998 9999999999999999999999999997422100
Q ss_pred ----------------------------------------CcceeecccccccccCccccccCcCCCcchhhhHHHHHHH
Q 003046 683 ----------------------------------------ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLE 722 (854)
Q Consensus 683 ----------------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~e 722 (854)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0000123469999999999999999999999999999999
Q ss_pred HHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 003046 723 LISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP---SISEVLKD 799 (854)
Q Consensus 723 lltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP---sm~eV~~~ 799 (854)
|++|+.||......+....+..|. ... . + +. ....+ ..+.+++.+|+ .+|.+|+ ++.|+++|
T Consensus 237 ll~G~~Pf~~~~~~~~~~~i~~~~------~~~-~-~-~~-~~~~s----~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 237 MLVGQPPFLADTPAETQLKVINWE------TTL-H-I-PS-QAKLS----REASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhhCCCCCCCCCHHHHHHHHhccC------ccc-c-C-CC-CCCCC----HHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999997654221111111110 000 0 0 00 11122 23556666665 4999999 89999988
No 175
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.1e-35 Score=308.64 Aligned_cols=250 Identities=31% Similarity=0.504 Sum_probs=203.0
Q ss_pred ccccccCcEEEEEEEECC----CcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|.... +..||+|+++..... ..+.+.+|+++++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998764 788999998765433 257788999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccc-----cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 607 GTLKEHLYGTLTH-----EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 607 gsL~~~L~~~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
++|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999654211 46789999999999999999999998 999999999999999999999999999986654
Q ss_pred CCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
... .......++..|+|||.+....++.++||||+||+++||++ |..||..... ..+.+... .+...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~~----~~~~~--- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN----EEVLEYLR----KGYRL--- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHHH----cCCCC---
Confidence 321 12233457889999999988889999999999999999999 6999976531 12222111 11110
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
..+......+.+++.+|++.+|++||++.|++++|+
T Consensus 227 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 ------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111122356889999999999999999999999874
No 176
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.2e-35 Score=330.09 Aligned_cols=253 Identities=22% Similarity=0.252 Sum_probs=196.2
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
..+.+.+.||+|+||.||+++.+ +++.+|+|++.... ......+.+|+.+++.++||||+++++++..++..++||
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 122 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 45566789999999999999887 57889999986432 222345778999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++.. ..++...+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 123 Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 123 EYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred cCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 99999999998843 3467778888999999999999998 999999999999999999999999999986544
Q ss_pred CCcceeecccccccccCccccccC----cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQ----QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
..........||+.|+|||++... .++.++|||||||++|||++|+.||...... ..............
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~~~~~i~~~~~~~~ 267 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------GTYSKIMNHKNSLT 267 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCCCccc
Confidence 333333455699999999998754 3788999999999999999999999765421 11111111111111
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKDI 800 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~L 800 (854)
..+ .......+.+++..|+..++.+ ||++.|+++|.
T Consensus 268 ~~~-------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 268 FPD-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCC-------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 110 0112335778899999844443 78999999874
No 177
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.5e-35 Score=312.68 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=202.1
Q ss_pred HHHHhhccccccCcEEEEEEEECC----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
..+.+.+.||+|+||.||+|.+.+ ...||||...... ....+.+.+|+.++++++||||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 345567899999999999998653 2468999886554 3345678999999999999999999999875 456899
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++|+|.+++... ...+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999998532 33588999999999999999999998 99999999999999999999999999997654
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
...........++..|+|||.+....++.++|||||||+++|+++ |..||...... ....+ +..+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~~~----~~~~~~~~-- 228 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN----DVIGR----IENGERLP-- 228 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHH----HHcCCcCC--
Confidence 433222223335578999999988889999999999999999996 99999765421 11121 11111100
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
... .....+.+++.+|+..+|++||++.++++.|+++..
T Consensus 229 ---~~~----~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 229 ---MPP----NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ---CCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111 123468889999999999999999999999998754
No 178
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.2e-35 Score=325.56 Aligned_cols=240 Identities=26% Similarity=0.332 Sum_probs=187.2
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHH-HHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEV-TLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~-~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||+||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999876 577899999875321 1223344444 456788999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ...+.......++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~ 152 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GT 152 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CC
Confidence 999998853 34567778888999999999999998 99999999999999999999999999987533222 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +... .. .... .+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~---i~-~~~~------~~~~~ 218 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----MYDN---IL-NKPL------QLKPN 218 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH----HHHH---HH-hCCc------CCCCC
Confidence 334569999999999999999999999999999999999999997544211 1111 11 1111 01111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVL 797 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~ 797 (854)
....+.+++.+|++.+|.+||++.+.+
T Consensus 219 ----~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 219 ----ITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred ----CCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 223578899999999999999877433
No 179
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.5e-35 Score=311.29 Aligned_cols=252 Identities=31% Similarity=0.473 Sum_probs=199.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchh--chHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKR--EFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~--~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||+||+++.. +++.+|+|++......... ....|+.++++++||||+++++++......++||||++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~ 81 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP 81 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence 35678999999999999987 4668999999866433322 33559999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++. ....+++..+..++.|+++||++||+. +|+|+||||+||+++.++.++|+|||.+... .....
T Consensus 82 ~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~~~ 153 (260)
T PF00069_consen 82 GGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKL-SENNE 153 (260)
T ss_dssp TEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEES-TSTTS
T ss_pred ccccccccc----ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc-ccccc
Confidence 999999995 456789999999999999999999998 9999999999999999999999999998754 22223
Q ss_pred eeecccccccccCccccc-cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYI-SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~-~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......++..|+|||.+. +..++.++||||+|+++++|++|..||...........+..-........ ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 224 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS---------SQ 224 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH---------TT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc---------cc
Confidence 334556899999999998 88899999999999999999999999986521111111111111000000 00
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .......+.+++..|++.+|++||++.+++++
T Consensus 225 ~--~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 225 Q--SREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp S--HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred c--cchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 00012578999999999999999999999874
No 180
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.1e-35 Score=325.22 Aligned_cols=237 Identities=27% Similarity=0.340 Sum_probs=186.2
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHH-HHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEV-TLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~-~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999886 588999999875421 2233444554 467889999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ....+.+..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (321)
T cd05603 81 GELFFHLQ----RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ET 152 (321)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cc
Confidence 99988874 345677888889999999999999998 99999999999999999999999999987532222 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.. .. ..+.. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~---~i-~~~~~----------~ 214 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS----QMYD---NI-LHKPL----------Q 214 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH----HHHH---HH-hcCCC----------C
Confidence 23456899999999999989999999999999999999999999764411 1111 11 11110 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSIS 794 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~ 794 (854)
.+......+.+++.+|++.+|.+||+..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1111233578999999999999999753
No 181
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.6e-35 Score=315.98 Aligned_cols=260 Identities=23% Similarity=0.414 Sum_probs=201.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 597 (854)
..++.+.++||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.++++++||||+++++++...+..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 345667889999999999999754 24579999876442 22344678899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhccccc------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEE
Q 003046 598 VLVYEFMHNGTLKEHLYGTLT------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 671 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~ 671 (854)
++||||+++|+|.+++..... ......+..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 999999999999999964221 123346677889999999999999998 99999999999999999999999
Q ss_pred EecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003046 672 DFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 672 DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|||+++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||...... .+.. ..
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~----~~~~---~~ 234 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE----QVLK---FV 234 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH---HH
Confidence 99998754332211 1122235778999999999899999999999999999999 78888653311 1111 11
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.. +.... .+......+.+++.+|++.+|++||++.++++.|++.+
T Consensus 235 ~~-~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 235 MD-GGYLD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred Hc-CCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 11 11110 01112346889999999999999999999999998754
No 182
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.9e-35 Score=319.13 Aligned_cols=261 Identities=25% Similarity=0.433 Sum_probs=203.3
Q ss_pred HHHHHhhccccccCcEEEEEEEEC--------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeec
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE 594 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~ 594 (854)
...+.+.++||+|+||.||+|+.. ....+|+|+++... ......+..|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 345567899999999999999752 24578999887542 23345688899999999 699999999999999
Q ss_pred CeEEEEEEecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE
Q 003046 595 GRSVLVYEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 662 (854)
Q Consensus 595 ~~~~lV~e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl 662 (854)
+..++||||+++|+|.+++.... .....+++.++..++.|++.||.|||+. +++||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 99999999999999999986432 1234588999999999999999999998 99999999999999
Q ss_pred cCCCcEEEEEecccccccCCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccccccc
Q 003046 663 DKHMRAKVSDFGLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCR 740 (854)
Q Consensus 663 ~~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~ 740 (854)
+.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~---- 243 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE---- 243 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 999999999999997654322111 112234568999999998899999999999999999999 88888654311
Q ss_pred chHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 741 NIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 741 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+.. ....+...+ .+.....++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 244 ~~~~----~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 244 ELFK----LLREGHRMD---------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHH----HHHcCCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1111 111111111 111223357789999999999999999999999998754
No 183
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.2e-35 Score=314.00 Aligned_cols=254 Identities=25% Similarity=0.413 Sum_probs=199.3
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCc----EEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
.+.+.++||+|+||+||+|++. +++ .||+|+++... .....++.+|+.+++.++||||+++++++... ..+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~ 86 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLV 86 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEE
Confidence 3445688999999999999864 444 48999987543 23356788999999999999999999999754 46799
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 87 ~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 87 TQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999998532 34688999999999999999999998 99999999999999999999999999998664
Q ss_pred CCCcce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 681 DGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 681 ~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
...... .....++..|+|||...+..++.++|||||||++|||++ |..||..... ..+..+.. .+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~~~~----~~~~~~- 231 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA----REIPDLLE----KGERLP- 231 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHH----CCCcCC-
Confidence 332221 122235678999999998899999999999999999998 8999865431 12222221 111100
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+++.+|++.+|++||++.++++.|+.+.
T Consensus 232 --------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 232 --------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred --------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 01122346789999999999999999999999988764
No 184
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.7e-34 Score=309.77 Aligned_cols=248 Identities=25% Similarity=0.346 Sum_probs=195.0
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 83 (279)
T cd06619 4 QYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDG 83 (279)
T ss_pred hheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCC
Confidence 45678999999999999864 68899999986542 23345688999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+|||++.++.+||+|||++...... .
T Consensus 84 ~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~ 149 (279)
T cd06619 84 GSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---I 149 (279)
T ss_pred CChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---c
Confidence 9986542 356778889999999999999998 9999999999999999999999999998754332 1
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||..|+|||++.+..++.++|||||||++|||++|+.||..............+........ .+.+..
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~- 222 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED------PPVLPV- 222 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC------CCCCCC-
Confidence 2234689999999999998999999999999999999999999965332111111111111111110 011100
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+.+++.+|++.+|++||+++|++++
T Consensus 223 --~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 223 --GQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred --CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1122357899999999999999999999887
No 185
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-34 Score=310.24 Aligned_cols=254 Identities=27% Similarity=0.355 Sum_probs=191.7
Q ss_pred ccccccCcEEEEEEEECC---CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLKD---GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~---~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||+|.+.+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998653 4578999886543 233457888999999999999999999999999999999999999
Q ss_pred CHHHhhccccc-ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 608 TLKEHLYGTLT-HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 608 sL~~~L~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
+|.+++..... .....++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999964322 223456778888999999999999998 99999999999999999999999999987543322211
Q ss_pred -eecccccccccCccccccC-------cCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 687 -SSIVRGTVGYLDPEYYISQ-------QLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 687 -~~~~~gt~~Y~aPE~~~~~-------~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
.....++..|+|||++... .++.++|||||||++|||++ |+.||...... ....+. .. +....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~----~~~~~~---~~-~~~~~ 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE----QVLTYT---VR-EQQLK 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH----HHHHHH---hh-cccCC
Confidence 1234578899999998642 35789999999999999996 99999654311 111111 11 11111
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
..++.+.... ...+.+++.+|+ .+|++||+++||++.|+
T Consensus 230 ~~~~~~~~~~----~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKLPL----SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCCCC----ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2222222111 224677888998 58999999999998875
No 186
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.9e-35 Score=326.21 Aligned_cols=238 Identities=28% Similarity=0.354 Sum_probs=187.6
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHH-HhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVT-LLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999876 68999999987542 122334455554 56778999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~ 152 (325)
T cd05604 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DT 152 (325)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CC
Confidence 99988874 345688999999999999999999998 99999999999999999999999999987432221 22
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +.+ ... .+.+ .+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~----~~~---~~~-~~~~------~~~~~ 218 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE----MYD---NIL-HKPL------VLRPG 218 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH----HHH---HHH-cCCc------cCCCC
Confidence 234569999999999999999999999999999999999999997644211 111 111 1111 01111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISE 795 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e 795 (854)
....+.+++.+|++.+|.+||++.+
T Consensus 219 ----~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 219 ----ASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred ----CCHHHHHHHHHHhccCHHhcCCCCC
Confidence 2235778999999999999998753
No 187
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.4e-34 Score=311.41 Aligned_cols=247 Identities=24% Similarity=0.383 Sum_probs=199.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+...+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|++++++++||||+++++++......++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4455678999999999999875 57889999987443 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 85 GGGSALDLLK-----PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 9999999884 24578889999999999999999998 999999999999999999999999999876543221
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......|+..|+|||++.+..++.++|||||||++|||++|+.|+...... ....+ ...+. .+.+
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~----~~~~~-----~~~~- 221 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM----RVLFL----IPKNS-----PPTL- 221 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh----hHHhh----hhcCC-----CCCC-
Confidence 122245789999999999988999999999999999999999998643311 11111 11111 1111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......+.+++.+|++.+|++||+|.+|+++
T Consensus 222 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 ---EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ---CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 12234568899999999999999999999986
No 188
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.6e-34 Score=305.88 Aligned_cols=247 Identities=33% Similarity=0.473 Sum_probs=197.9
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 610 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~ 610 (854)
++||+|+||.||++...+++.||+|++...... ....+.+|++++++++|+||+++++++......++||||+.+++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999999877999999998765433 4567899999999999999999999999999999999999999999
Q ss_pred HhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee-ec
Q 003046 611 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS-SI 689 (854)
Q Consensus 611 ~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~-~~ 689 (854)
+++... ...+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.......... ..
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 998542 33578888899999999999999998 999999999999999999999999999875432221111 12
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCC
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYD 768 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~ 768 (854)
..++..|+|||.+.++.++.++|||||||++|||++ |..||...... ..... ...+. . ...+
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~----~~~~~----~~~~~--~-------~~~~ 217 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ----QTRER----IESGY--R-------MPAP 217 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH----HHHHH----HhcCC--C-------CCCC
Confidence 234667999999998899999999999999999999 88888654311 11111 11110 0 0011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 769 IQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 769 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
......+.+++.+|+..+|++||++.||++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 122346889999999999999999999999886
No 189
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.6e-35 Score=315.80 Aligned_cols=264 Identities=26% Similarity=0.392 Sum_probs=201.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeec--Ce
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GR 596 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~ 596 (854)
...+.+.+.||+|+||.||+++.. +++.||+|.++... ......+.+|++++++++|||++++.+++... ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 345566788999999999999753 57889999987543 33346788999999999999999999998775 56
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred eEEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 89999999999999998532 23578999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc-------cccccchHHHHH
Q 003046 677 KFAVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-------GANCRNIVQWAK 747 (854)
Q Consensus 677 ~~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~-------~~~~~~l~~~~~ 747 (854)
+........ ......++..|+|||++.+..++.++|||||||++|||++++.|...... +...+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 865433221 11234467789999999888899999999999999999998776432110 000011111111
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.....+.... ........+.+++.+|++.+|++||++.+|++.|+.+
T Consensus 237 ~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGKRLP---------RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCccCC---------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111111110 0111234688999999999999999999999999875
No 190
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=326.32 Aligned_cols=247 Identities=25% Similarity=0.383 Sum_probs=200.0
Q ss_pred cccccCcEEEEEEEECC-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHH
Q 003046 533 KIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKE 611 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~ 611 (854)
+||+|.||+||.|+..+ ...+|||-+..........+.+|+.+.++++|+|||+++|.|.+.+..-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 69999999999998774 56789999987766666778999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEecccccccCCCcceeecc
Q 003046 612 HLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVSSIV 690 (854)
Q Consensus 612 ~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~ 690 (854)
+|+..... -+=++.+.-.+.+||++||.|||+. .|||||||-+||||+. .|.+||+|||.++.+.. ....+.+.
T Consensus 662 LLrskWGP-lKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TETF 736 (1226)
T KOG4279|consen 662 LLRSKWGP-LKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTETF 736 (1226)
T ss_pred HHHhccCC-CccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-CCcccccc
Confidence 99754321 1125667777899999999999999 9999999999999974 68999999999986543 33445566
Q ss_pred cccccccCccccccC--cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCC
Q 003046 691 RGTVGYLDPEYYISQ--QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYD 768 (854)
Q Consensus 691 ~gt~~Y~aPE~~~~~--~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~ 768 (854)
.||..|||||++..+ .|..++|||||||.+.||.||++||.....+.....-+. .+ .+ ....+
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG----my-------Kv----HP~iP 801 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG----MY-------KV----HPPIP 801 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc----ce-------ec----CCCCc
Confidence 799999999999754 588999999999999999999999976543221100000 00 01 12334
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 769 IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 769 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+-..+...++++|+.++|.+||++.++++.
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 5556678899999999999999999999864
No 191
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.6e-34 Score=308.72 Aligned_cols=239 Identities=21% Similarity=0.379 Sum_probs=187.9
Q ss_pred ccccccCcEEEEEEEECC-------------CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 532 KKIGSGGFGVVYYGKLKD-------------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~-------------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
+.||+|+||.||+|++.. ...||+|++..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998542 2358899876554444557888999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc-------EEEE
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-------AKVS 671 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~-------~kL~ 671 (854)
+||||+++|+|..++... ...+++..++.++.||++||+|||+. +|+||||||+|||++.++. +|++
T Consensus 81 lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 999999999999887532 34588889999999999999999998 9999999999999987664 8999
Q ss_pred EecccccccCCCcceeecccccccccCccccc-cCcCCCcchhhhHHHHHHHHH-hCCcccccccccccccchHHHHHHh
Q 003046 672 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYI-SQQLTDKSDVYSFGVILLELI-SGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 672 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDVwS~Gvvl~ell-tG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..|+......+ . . .
T Consensus 155 d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~-~---~- 220 (262)
T cd05077 155 DPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE----K-E---R- 220 (262)
T ss_pred CCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH----H-H---H-
Confidence 99998654321 2234788999999887 467899999999999999998 5888876443111 0 0 0
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
...+... . .. .....+.+++.+|++.+|.+||++.+|+++|
T Consensus 221 ~~~~~~~-~-----~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 221 FYEGQCM-L-----VT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHhcCcc-C-----CC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1111110 0 01 1124578999999999999999999999876
No 192
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-34 Score=343.78 Aligned_cols=260 Identities=22% Similarity=0.314 Sum_probs=201.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.++||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 YeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY 83 (932)
T PRK13184 4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPY 83 (932)
T ss_pred eEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEc
Confidence 345689999999999999876 589999999875422 2245688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhccccc-------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 604 MHNGTLKEHLYGTLT-------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
+++|+|.+++..... ....+++..++.++.||++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCcc
Confidence 999999998854211 123456778899999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCc-----------------ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003046 677 KFAVDGAS-----------------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 677 ~~~~~~~~-----------------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~ 739 (854)
+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~--- 237 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR--- 237 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh---
Confidence 76521110 0112246999999999999999999999999999999999999999753311
Q ss_pred cchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHH
Q 003046 740 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIV 805 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~~~~ 805 (854)
.+... ... .++.-.. ...+....+.+++.+|++.+|++|| +++++.+.|+..+.
T Consensus 238 -ki~~~--~~i--------~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 238 -KISYR--DVI--------LSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred -hhhhh--hhc--------cChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11100 000 0000000 0012234578899999999999996 67888888888765
No 193
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.5e-34 Score=309.15 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=197.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|... ++..+++|.+..........+.+|+++++.++|||++++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 556788999999999999887 4778899988655544556788899999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++.. ....+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++....... ..
T Consensus 87 ~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~ 159 (282)
T cd06643 87 GAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QR 159 (282)
T ss_pred CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-cc
Confidence 999888753 234688999999999999999999998 99999999999999999999999999987543322 12
Q ss_pred eecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 687 SSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.....++..|+|||++. +..++.++|||||||++|||++|+.||......+ ..... .. ........
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~~~~~----~~-~~~~~~~~- 230 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR---VLLKI----AK-SEPPTLAQ- 230 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH---HHHHH----hh-cCCCCCCC-
Confidence 23345899999999984 3457789999999999999999999986543111 11111 11 10001111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+......+.+++.+|++.+|.+||++.+++++
T Consensus 231 ------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 231 ------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11122457899999999999999999999876
No 194
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-34 Score=311.51 Aligned_cols=239 Identities=23% Similarity=0.377 Sum_probs=186.9
Q ss_pred cccccCcEEEEEEEECC-------------------------CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeE
Q 003046 533 KIGSGGFGVVYYGKLKD-------------------------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQF 587 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~~-------------------------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l 587 (854)
+||+|+||.||+|.+.. ...||+|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 13588998865444445678889999999999999999
Q ss_pred eeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-
Q 003046 588 LGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM- 666 (854)
Q Consensus 588 ~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~- 666 (854)
+++|......++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 9999999999999999999999988853 234678889999999999999999998 999999999999998643
Q ss_pred ------cEEEEEecccccccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHH-hCCccccccccccc
Q 003046 667 ------RAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELI-SGQEAISNEKFGAN 738 (854)
Q Consensus 667 ------~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~ell-tG~~pf~~~~~~~~ 738 (854)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||......+
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~- 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE- 229 (274)
T ss_pred ccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-
Confidence 4899999987543221 12347888999998875 56889999999999999985 6999987543211
Q ss_pred ccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
...+... .... ... ....+.+++.+|++.+|++||++.+|++.|.
T Consensus 230 ---~~~~~~~---~~~~--------~~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 ---KERFYEK---KHRL--------PEP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ---HHHHHHh---ccCC--------CCC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1111110 0000 011 1135788999999999999999999999873
No 195
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=6.8e-35 Score=315.68 Aligned_cols=256 Identities=25% Similarity=0.429 Sum_probs=201.2
Q ss_pred HHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.+.||+|+||.||+|..+ ++..||+|++.... .....++.+|+.++++++||||+++++++..+...++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 3455688999999999999864 46789999987543 2335678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccc------------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeE
Q 003046 600 VYEFMHNGTLKEHLYGTL------------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
|+||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +++||||||+||+
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil 162 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCL 162 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheE
Confidence 999999999999986421 1123578889999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccc
Q 003046 662 LDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANC 739 (854)
Q Consensus 662 l~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~ 739 (854)
++.++.+||+|||+++....... ........+..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~--- 239 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE--- 239 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 99999999999999875432221 11122235678999999998999999999999999999998 88888644311
Q ss_pred cchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 740 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
.+.. .+..+..... +.....++.+++.+|++.+|++||++.||++.|++
T Consensus 240 -~~~~----~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 -EVIY----YVRDGNVLSC---------PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -HHHH----HHhcCCCCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1222 1222222110 11123468899999999999999999999999873
No 196
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=6.3e-35 Score=321.67 Aligned_cols=239 Identities=24% Similarity=0.313 Sum_probs=189.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
++.+.||+|+||.||+|..+ +++.||+|++.... ......+..|..++..+. |++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey 82 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY 82 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence 34678999999999999876 68899999987542 222345677888888875 57888899999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 83 VNGGDLMYHIQ----QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred CCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 99999999884 334688999999999999999999998 99999999999999999999999999987532221
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+..... .... .
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~i~----~~~~------~- 219 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED----ELFQSIM----EHNV------S- 219 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHH----hCCC------C-
Confidence 1223346899999999999999999999999999999999999999765421 1222111 1111 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSI 793 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm 793 (854)
++......+.+++.+|++.+|++|++.
T Consensus 220 ---~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 ---YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111122357889999999999999974
No 197
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=294.87 Aligned_cols=246 Identities=26% Similarity=0.377 Sum_probs=198.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCc----cc----hhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEE
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY----QG----KREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~----~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV 600 (854)
.+.||+|..++|.++.++ +|++.|+|++..... +. .+.-.+|+.||+++ .||+|+++.+++..+...++|
T Consensus 22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV 101 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV 101 (411)
T ss_pred HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence 467999999999998776 688999999864321 11 22345799999998 699999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
+|.|+.|.|.|+| ...-.+++....+|+.|+..|++|||.. .||||||||+|||++++.++||+|||.|+.+.
T Consensus 102 Fdl~prGELFDyL----ts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 102 FDLMPRGELFDYL----TSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred hhhcccchHHHHh----hhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeeccC
Confidence 9999999999999 4456789999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCcceeecccccccccCcccccc------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYIS------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
++. .....+|||+|+|||.+.. ..|+..+|+|++||+||-|+.|.+||....+ +.. ...+.+|.
T Consensus 175 ~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ------mlM--LR~ImeGk 244 (411)
T KOG0599|consen 175 PGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ------MLM--LRMIMEGK 244 (411)
T ss_pred Cch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH------HHH--HHHHHhcc
Confidence 543 3456789999999999863 3578889999999999999999999987651 111 11122222
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. +....-.+....+.+|+.+|++.||++|.|++|+++|
T Consensus 245 yq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 245 YQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred cc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 11 0111112333457899999999999999999999987
No 198
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-34 Score=307.77 Aligned_cols=247 Identities=29% Similarity=0.451 Sum_probs=197.3
Q ss_pred HHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeee-ecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-~~~~~~lV~e~~~ 605 (854)
.+.+.+.||+|+||.||+|... ++.||+|.++... ..+.+.+|+.++++++|+|++++++++. ..+..++|+||++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 4456789999999999999876 7889999986432 3456889999999999999999999764 4567899999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 84 KGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999998543 233578899999999999999999998 99999999999999999999999999987543221
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+..+. ..+.... .
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~----~~~~~~~----~~~~~~~-----~- 220 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVVPRV----EKGYKMD-----A- 220 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH----hcCCCCC-----C-
Confidence 12235678999999998899999999999999999998 9999865431 1222221 1111111 1
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
.......+.+++.+|++.+|++||++.++++.|++
T Consensus 221 ---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 221 ---PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred ---CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 11223467899999999999999999999999875
No 199
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9e-35 Score=318.29 Aligned_cols=264 Identities=20% Similarity=0.289 Sum_probs=195.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 87 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD 87 (309)
T ss_pred eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC
Confidence 445688999999999999876 578899999875432 233467789999999999999999999999999999999997
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 88 ~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 88 K-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred C-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence 5 788777432 34578888899999999999999998 999999999999999999999999999875433221
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH-------Hhhhc-CCcc
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-------LHIES-GDIQ 756 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~-------~~~~~-~~~~ 756 (854)
......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+..-.. ..+.. ....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 2223457899999999865 4688999999999999999999999976542221111111000 00000 0000
Q ss_pred cccCCcccCc----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDE----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..-.+..... ........+.+++.+|++.||.+|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000000 001122357799999999999999999999875
No 200
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=6.5e-34 Score=306.31 Aligned_cols=247 Identities=22% Similarity=0.356 Sum_probs=201.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+...+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++++.||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3445678999999999999876 58899999987543 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ..+++.+...++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 85 GGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 99999998842 3578888899999999999999998 999999999999999999999999999976543322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......++..|+|||++.+..++.++|||||||++|||++|..||....... ... ....+ ..
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~----~~~~~---------~~ 218 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----VLF----LIPKN---------NP 218 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh----Hhh----hhhcC---------CC
Confidence 2223457889999999998889999999999999999999999997544111 000 00111 11
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..........+.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 12233445678899999999999999999999887
No 201
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=323.43 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=206.4
Q ss_pred HhhccccccCcEEEEEEEEC--CCc--EEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK--DGK--EIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~--~~~--~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
.+.++||+|.||.|++|.|+ +|+ .||||.++..... ...+|.+|+.+|.+|+|||+++|+|+..+ ....+|+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 35678999999999999987 344 5899999876544 56789999999999999999999999988 678899999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
++.|+|.+.|+. .....+-......++.|||.||.||.++ ++|||||.++|+||...-.|||+||||.+-+....
T Consensus 192 aplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 192 APLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred cccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 999999999976 3455677888899999999999999999 99999999999999999999999999999776554
Q ss_pred ccee--ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 684 SHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 684 ~~~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.+.. ....-...|+|||.+..++++.++|||+|||.+|||+| |..||.+.... .+. +.+|
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~----qIL-------------~~iD 329 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI----QIL-------------KNID 329 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----HHH-------------Hhcc
Confidence 4432 22234678999999999999999999999999999999 78899776511 111 1223
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
..-+-..+..+.+.+.+++..||..+|++||++..|.+.+-
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 22222334566778999999999999999999999985543
No 202
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-34 Score=327.38 Aligned_cols=259 Identities=21% Similarity=0.265 Sum_probs=192.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|.+. .++.||||... ...+.+|+++|++++|+||+++++++...+..++|||++.
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 445688999999999999887 47889999632 2346789999999999999999999999999999999995
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc-c
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-H 685 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~-~ 685 (854)
++|.+++... ...+++.+++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 244 ~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 244 SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 6888887432 34689999999999999999999998 999999999999999999999999999976543222 1
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc-c---cccchHHHHHHhhh-cCCcccccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG-A---NCRNIVQWAKLHIE-SGDIQGIID 760 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~-~---~~~~l~~~~~~~~~-~~~~~~~id 760 (854)
......||+.|+|||++.+..++.++|||||||++|||++|..++-..... . ....+.+.+..... .........
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 223456999999999999999999999999999999999988665322111 0 00112111111000 000000000
Q ss_pred Ccc------------cCcCC-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSL------------LDEYD-------IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l------------~~~~~-------~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+ ..... ......+.+|+.+|++.||++|||+.|+++|
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 00000 0111257789999999999999999999986
No 203
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.8e-34 Score=307.86 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=194.8
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeec------CeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE------GRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~------~~~~ 598 (854)
.+.+.+.||+|+||.||+|... +++.||+|++.... .....+..|+.++.++ +|+||+++++++... ...+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 3455678999999999999876 57889999986543 3456788999999998 799999999998753 4678
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+.+|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 999999999999998642 234688999999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCcceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
...... ......|+..|+|||++. ...++.++|||||||++|||++|+.||..... ...... ....
T Consensus 161 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~------~~~~~~--~~~~ 231 (272)
T cd06637 161 LDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRALFL--IPRN 231 (272)
T ss_pred cccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH------HHHHHH--HhcC
Confidence 433221 223456899999999986 34578899999999999999999999964331 111111 0111
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+ ......+.+++.+|+..+|.+||++.||+++
T Consensus 232 ~~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 PAPRLKS--------KKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CCCCCCC--------CCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 1111111 1122357899999999999999999999864
No 204
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6.8e-34 Score=304.71 Aligned_cols=254 Identities=24% Similarity=0.345 Sum_probs=190.2
Q ss_pred ccccccCcEEEEEEEECCCc---EEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLKDGK---EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~---~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||+|...++. .+++|.+.... ....+.+.+|+.+++.++||||+++++.|......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 36999999999999765433 45667665433 234567899999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC-cce
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-SHV 686 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~-~~~ 686 (854)
+|.+++..........++.....++.|+++||+|||+. +++||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999975433334566777888999999999999998 99999999999999999999999999986422211 112
Q ss_pred eecccccccccCcccccc-------CcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 687 SSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||...... .... .... +.....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----~~~~---~~~~-~~~~~~ 229 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR----EVLN---HVIK-DQQVKL 229 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH----HHHH---HHHh-hccccc
Confidence 233457899999999753 245789999999999999997 56677543311 1111 1111 122233
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.++.+...++ ..+.+++..|+ .+|++||+++||++.|.
T Consensus 230 ~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 4444433333 34677888999 67999999999998874
No 205
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.9e-34 Score=312.55 Aligned_cols=250 Identities=23% Similarity=0.330 Sum_probs=200.6
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
..+.+.+.||+|+||.||+|... +++.||+|.+..........+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 34556788999999999999874 68999999997655555667889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++.. ..+++..+..++.|++.||.|||+. +++||||||+|||++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 99 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred CCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 99999998842 3478888999999999999999998 999999999999999999999999999875443322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
. .....+++.|+|||.+.+..++.++|||||||++|+|++|+.||....... .+.. ....+ ...
T Consensus 171 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~---~~~~----~~~~~-~~~------- 234 (297)
T cd06656 171 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYL----IATNG-TPE------- 234 (297)
T ss_pred C-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch---heee----eccCC-CCC-------
Confidence 1 223458899999999999889999999999999999999999996543111 0000 00000 000
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+......+.+++.+|++.+|++||++.+|+++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 235 LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111223457789999999999999999999985
No 206
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.3e-34 Score=306.75 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=191.8
Q ss_pred ccccccCcEEEEEEEEC----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeee-ecCeEEEEEEecC
Q 003046 532 KKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVYEFMH 605 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-~~~~~~lV~e~~~ 605 (854)
+.||+|+||.||+|.+. ....||+|.+.... ......+.+|+.+++.++||||+++++++. .++..++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999864 23579999875432 233467888999999999999999999875 4556789999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++... ...+.+..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999998532 23456777888999999999999998 9999999999999999999999999998754332111
Q ss_pred ---eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhC-CcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 686 ---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISG-QEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ---~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG-~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......++..|+|||++.+..++.++|||||||++|||++| ..||..... ..+... . ..+.... .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~---~-~~~~~~~-~-- 223 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS----FDITVY---L-LQGRRLL-Q-- 223 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHH---H-hcCCCCC-C--
Confidence 11223467789999999988999999999999999999995 556654321 122221 1 1111000 0
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
+......+.+++..|++.+|++||++.||++.|+++.
T Consensus 224 ------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 224 ------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0111235889999999999999999999999999875
No 207
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.2e-34 Score=304.14 Aligned_cols=249 Identities=25% Similarity=0.398 Sum_probs=200.9
Q ss_pred HHHhhccccccCcEEEEEEEECC-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.+.||+|+||.||+|...+ ++.+|+|.+..... ..++.+|++++++++||||+++++++......++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 34567889999999999999874 78999999875432 5789999999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ....+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++........
T Consensus 82 ~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 82 AGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999999853 235688999999999999999999998 999999999999999999999999999876543321
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....... .... .... ..+.+
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~---~~~~-----~~~~-----~~~~~-- 219 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR---AIFM-----IPNK-----PPPTL-- 219 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh---hhhh-----hccC-----CCCCC--
Confidence 2233458899999999998899999999999999999999999997543111 0000 0000 00000
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+.+++.+|++.+|++||++.||+++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 0111223468899999999999999999999874
No 208
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.8e-34 Score=306.05 Aligned_cols=252 Identities=22% Similarity=0.338 Sum_probs=198.0
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.+.||+|+||.||+|+.. +++.||+|+++.........+.+|+.+++.++||||+++++.+...+..++|+||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 4567789999999999999875 588999999876544444567889999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++. ....+++.++..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....... .
T Consensus 90 ~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~ 161 (267)
T cd06645 90 GGSLQDIYH----VTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-A 161 (267)
T ss_pred CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-c
Confidence 999999884 234688999999999999999999998 99999999999999999999999999987553322 1
Q ss_pred eeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 686 VSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......|+..|+|||++. ...++.++|||||||++|||++|..||....... .+... ...... .+.
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~---~~~~~-----~~~~~~---~~~ 230 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLM-----TKSNFQ---PPK 230 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh---hHHhh-----hccCCC---CCc
Confidence 223346899999999974 4568889999999999999999999986433111 01000 001000 011
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ......+.+++.+|++.+|++||++++|+++
T Consensus 231 ~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 231 LKDK--MKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccc--CCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 1110 0112357889999999999999999999875
No 209
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.9e-34 Score=312.02 Aligned_cols=249 Identities=26% Similarity=0.347 Sum_probs=196.6
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.||+|+||+||+|... +++.||+|++..... .....+.+|++++++++|+||+++.+++..++..++||||++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence 3478999999999999876 688999999865432 223457789999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 84 GGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred CccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 99999888542 234689999999999999999999998 999999999999999999999999999875433221
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....|+..|+|||++.+..++.++|+|||||++|||++|..||........ ............ .....
T Consensus 158 -~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~----~~~~~~~~~~~~------~~~~~ 226 (285)
T cd05632 158 -IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK----REEVDRRVLETE------EVYSA 226 (285)
T ss_pred -ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhhhccc------cccCc
Confidence 2234689999999999988999999999999999999999999975431111 111111111111 01111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
. ....+.+++..|++.+|++||+ +.+++++
T Consensus 227 ~----~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 227 K----FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred c----CCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 1 2235778999999999999999 6677665
No 210
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-34 Score=312.85 Aligned_cols=263 Identities=23% Similarity=0.323 Sum_probs=192.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhc---CCCceeeEeeeeee-----cCeE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRI---HHRNLVQFLGYCQE-----EGRS 597 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l---~HpnIv~l~g~~~~-----~~~~ 597 (854)
.+.+.||+|+||+||+|..+ +++.||+|.++..... ....+.+|+++++.+ +||||+++++++.. ....
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~ 82 (288)
T cd07863 3 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKV 82 (288)
T ss_pred eEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceE
Confidence 45678999999999999876 6889999998754222 233456777777665 69999999998864 3457
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+.+ +|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 83 ~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 83 TLVFEHVDQ-DLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred EEEEccccc-CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 999999974 888887542 234588999999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc-
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ- 756 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~- 756 (854)
...... ......||..|+|||++.+..++.++||||+||++|||++|+.||......+....+..+...........
T Consensus 157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 157 IYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred cccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 654321 12234589999999999998999999999999999999999999975542222222222111000000000
Q ss_pred -----cccCCcc---cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 -----GIIDPSL---LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 -----~~id~~l---~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+.. ......+....+.+++.+|++.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 000111223457899999999999999999999865
No 211
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=332.52 Aligned_cols=253 Identities=26% Similarity=0.399 Sum_probs=206.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CC----cEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DG----KEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~----~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
..-.++||+|+||+||+|.|- +| .+||+|++.... .+...++.+|+.+|.++.|||+++|+|+|.... ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 334678999999999999764 33 468999987653 445678999999999999999999999998776 78999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
+||+.|+|.++++. ++..+.-...+.++.|||+||.|||.+ +++||||.++||||..-..+||.|||+|+....
T Consensus 777 q~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 99999999999974 455677788899999999999999998 999999999999999999999999999997765
Q ss_pred CCccee-ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GASHVS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~~~-~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
...... ....-.+.|||-|.+....++.++|||||||.+||++| |..|+.+....+ +...++.|+
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------I~dlle~ge----- 917 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------IPDLLEKGE----- 917 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------hhHHHhccc-----
Confidence 544333 23344678999999999999999999999999999999 999998766221 222222221
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
+-..+.-+...+..++.+||..|+..||+++++...+.++.
T Consensus 918 ----RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 918 ----RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred ----cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 11223334455788999999999999999999998887764
No 212
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.7e-34 Score=312.37 Aligned_cols=249 Identities=27% Similarity=0.377 Sum_probs=196.8
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.||+|+||.||++... +++.||||.+...... ....+..|+.++++++|+|++++++.+...+..++||||++
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred eeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC
Confidence 4578999999999999876 6889999998754322 23456789999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 84 g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 84 GGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred CCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 99999988542 234588899999999999999999998 999999999999999999999999999875433222
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||.............. ..... ......
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~----~~~~~------~~~~~~ 226 (285)
T cd05630 158 -IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER----LVKEV------QEEYSE 226 (285)
T ss_pred -ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHh----hhhhh------hhhcCc
Confidence 1234689999999999999999999999999999999999999975431111001101 00000 001111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
. ....+.+++..|++.+|++||+ +.|+++|
T Consensus 227 ~----~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 227 K----FSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred c----CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 1 2234789999999999999999 8888875
No 213
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.5e-34 Score=309.44 Aligned_cols=251 Identities=29% Similarity=0.429 Sum_probs=197.1
Q ss_pred ccccccCcEEEEEEEECC-------CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLKD-------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~-------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.||+|+||.||+|+..+ ++.+|||.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998752 2578999876443 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhccccc---ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-----cEEEEEecc
Q 003046 604 MHNGTLKEHLYGTLT---HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-----RAKVSDFGL 675 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-----~~kL~DFGl 675 (854)
+++++|.+++..... ....+++.+++.++.|++.||+|||+. +++|+||||+||+++.++ .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999964322 224578899999999999999999998 999999999999999887 899999999
Q ss_pred cccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcC
Q 003046 676 SKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 676 a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
++........ ......++..|+|||++.++.++.++|||||||++|||++ |+.||...... ...... ..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~----~~~~~~----~~~ 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ----EVLQHV----TAG 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH----HHHHHH----hcC
Confidence 8754332211 1122345788999999999999999999999999999998 99998654311 111111 111
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
... .........+.+++.+|+..+|++||++.+|.+.|++
T Consensus 230 ~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 GRL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred Ccc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 100 1111223467899999999999999999999998863
No 214
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-34 Score=308.69 Aligned_cols=259 Identities=24% Similarity=0.317 Sum_probs=204.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
...+.+.+.||+|+||+||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 345667789999999999999876 58899999886543 2335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ...+++.....++.+++.||.|||+. .+++||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 84 FMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred cCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999988743 34578899999999999999999974 28999999999999999999999999998644222
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc----ccccchHHHHHHhhhcCCcccc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG----ANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~----~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
. .....|+..|+|||++.+..++.++|||||||++|||++|+.||...... .....+..+......+..
T Consensus 158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 230 (284)
T cd06620 158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP---- 230 (284)
T ss_pred c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC----
Confidence 1 12346899999999998889999999999999999999999999754421 111122333332222110
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
+.+. ..+....+.+++.+|++.+|++||++.||+++.-
T Consensus 231 --~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 231 --PRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred --CCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 1110 1113346889999999999999999999998743
No 215
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.7e-34 Score=314.52 Aligned_cols=197 Identities=23% Similarity=0.372 Sum_probs=160.0
Q ss_pred hccccccCcEEEEEEEEC---CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEEEEEecC
Q 003046 531 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~lV~e~~~ 605 (854)
.++||+|+||+||+|+.+ +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999865 46789999986432 23457789999999999999999998854 456789999986
Q ss_pred CCCHHHhhcccc-----cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE----cCCCcEEEEEeccc
Q 003046 606 NGTLKEHLYGTL-----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLS 676 (854)
Q Consensus 606 ~gsL~~~L~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~~kL~DFGla 676 (854)
++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 47877764221 1223588888999999999999999998 99999999999999 45678999999999
Q ss_pred ccccCCCcc--eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003046 677 KFAVDGASH--VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 677 ~~~~~~~~~--~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~ 733 (854)
+........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 865433221 2234568999999999977 45889999999999999999999999643
No 216
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.9e-34 Score=307.35 Aligned_cols=253 Identities=25% Similarity=0.398 Sum_probs=198.8
Q ss_pred HhhccccccCcEEEEEEEECC--CcEEEEEEEecCCc----------cchhchHHHHHHhhh-cCCCceeeEeeeeeecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKD--GKEIAVKVLTSNSY----------QGKREFTNEVTLLSR-IHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~--~~~vAvK~l~~~~~----------~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~~~ 595 (854)
.+.+.||+|+||.||+|.+.. ++.+|+|.+..... ....++..|+.++.+ ++||||+++++++..++
T Consensus 3 ~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 82 (269)
T cd08528 3 AVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND 82 (269)
T ss_pred hhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC
Confidence 456789999999999999875 67899998753311 112346678887765 79999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
..++||||+++++|.+++.........+++..++.++.|++.||.|||+. .+++|+||||+||+++.++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 83 RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999998865434456788999999999999999999963 1899999999999999999999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .... . ..++..
T Consensus 161 ~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~----~~~~---~-~~~~~~ 230 (269)
T cd08528 161 AKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML----SLAT---K-IVEAVY 230 (269)
T ss_pred eeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH----HHHH---H-HhhccC
Confidence 97654432 223456899999999999888999999999999999999999998644311 1111 1 111111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.... .. .....+.+++.+|++.+|++||++.||.++++
T Consensus 231 ~~~~----~~----~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 231 EPLP----EG----MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CcCC----cc----cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1100 01 12245788999999999999999999999886
No 217
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=309.63 Aligned_cols=247 Identities=24% Similarity=0.362 Sum_probs=207.8
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
.|.+++.||+|.|+.|-+|++- .|+.||||++.+... .....+.+|++.|+.++|||||+|+++......+|||.|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 3556788999999999999765 799999999976543 3356788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE-cCCCcEEEEEecccccccCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL-DKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl-~~~~~~kL~DFGla~~~~~~ 682 (854)
-.+|+|.|||. ..+..+.+..+.+++.||+.|+.|+|+. .+|||||||+||.+ ..-|-+||.|||++..+.++
T Consensus 99 GD~GDl~DyIm---KHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 99 GDGGDLFDYIM---KHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred cCCchHHHHHH---hhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 99999999995 4566789999999999999999999998 89999999999876 45689999999999877655
Q ss_pred CcceeecccccccccCccccccCcCCC-cchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTD-KSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~-~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. .....+|.+.|-|||++.+..|+. ++||||+|||||.|++|+.||+..+..+.. ..++|.
T Consensus 173 ~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL----------------TmImDC 234 (864)
T KOG4717|consen 173 K--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL----------------TMIMDC 234 (864)
T ss_pred c--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh----------------hhhhcc
Confidence 3 335568999999999999999875 679999999999999999999876633322 223343
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. ..+.....++.+|+..|+..||++|.+.+||+..
T Consensus 235 KY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 235 KY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred cc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 32 2234456678999999999999999999998753
No 218
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.6e-34 Score=307.80 Aligned_cols=254 Identities=25% Similarity=0.329 Sum_probs=188.5
Q ss_pred ccccccCcEEEEEEEECC---CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLKD---GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~---~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||+|...+ ...+|+|.+.... ......+.+|+++++.++||||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997643 3468888775432 223456888999999999999999999999999999999999999
Q ss_pred CHHHhhcccccc-cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc-
Q 003046 608 TLKEHLYGTLTH-EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH- 685 (854)
Q Consensus 608 sL~~~L~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~- 685 (854)
+|.+++...... ....++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999654321 23456778889999999999999998 9999999999999999999999999998643322111
Q ss_pred eeecccccccccCcccccc-------CcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
......++..|+|||++.. ..++.++|||||||++|||++ |..||...... .... .....+. ..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----~~~~---~~~~~~~-~~ 229 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE----QVLK---QVVREQD-IK 229 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH----HHHH---HHhhccC-cc
Confidence 1122345778999998753 356789999999999999999 78888654311 1111 1111111 11
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
..++.+... ....+.+++..|+ .+|++||+++||++.|.
T Consensus 230 ~~~~~~~~~----~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQLDLK----YSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCccccc----CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 122222222 2234567778888 59999999999999874
No 219
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2e-34 Score=310.75 Aligned_cols=262 Identities=25% Similarity=0.405 Sum_probs=203.1
Q ss_pred HHHhhccccccCcEEEEEEEEC-----CCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeee--cCeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-----~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~ 598 (854)
.+.+.+.||+|+||.||+|++. +++.+|||++...... ....+.+|+++++.++||||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 3455688999999999999864 3678999999755433 46679999999999999999999999877 55789
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++..
T Consensus 85 lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 999999999999998542 23589999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCcce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc-------cchHHHHHHh
Q 003046 679 AVDGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-------RNIVQWAKLH 749 (854)
Q Consensus 679 ~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~-------~~l~~~~~~~ 749 (854)
........ .....++..|+|||.+.+..++.++||||||++++||++|+.|+......... ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 65322211 11233566799999999889999999999999999999999998543211100 0111111111
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+..+. ....+.....++.+++.+|++.+|++||+|.||+++|+++
T Consensus 239 ~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 239 LKEGE---------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHcCC---------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111 0011112235688999999999999999999999999875
No 220
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.7e-34 Score=316.63 Aligned_cols=253 Identities=22% Similarity=0.274 Sum_probs=192.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+++.. +++.||+|++.... ......+.+|+.++..++|+||+++++++..++..++||||
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (331)
T cd05597 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDY 82 (331)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEec
Confidence 345688999999999999876 58899999987431 22345578899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 83 YVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred CCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999853 234678888999999999999999998 99999999999999999999999999987654433
Q ss_pred cceeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||...... +.............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-------~~~~~i~~~~~~~~- 228 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-------ETYGKIMNHKEHFQ- 228 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-------HHHHHHHcCCCccc-
Confidence 333334569999999999863 45788999999999999999999999754421 11111111111000
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVL--PHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~--~~P~~RPsm~eV~~~ 799 (854)
+.+. .... ...+.+++.+|+. .++..||++.++++|
T Consensus 229 ~~~~-~~~~----~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPPD-VTDV----SEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCc-cCCC----CHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0000 0111 2345566666554 444558999999988
No 221
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.6e-34 Score=306.80 Aligned_cols=247 Identities=26% Similarity=0.385 Sum_probs=200.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||.|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++|+||+++++++..+...++|+||++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 82 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG 82 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence 456688999999999999876 58899999987543 3334568899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+++.......
T Consensus 83 ~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 153 (274)
T cd06609 83 GGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS- 153 (274)
T ss_pred CCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc-
Confidence 9999999853 2688999999999999999999998 999999999999999999999999999976654322
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... .... .+..+.. +.+..
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~----~~~~----~~~~~~~-----~~~~~ 220 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM----RVLF----LIPKNNP-----PSLEG 220 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH----HHHH----HhhhcCC-----CCCcc
Confidence 223345888999999999888999999999999999999999999754311 1111 1111111 11111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .....+.+++.+|+..+|++||++++++++
T Consensus 221 ~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 221 N---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred c---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1 023357889999999999999999999875
No 222
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.7e-34 Score=307.11 Aligned_cols=247 Identities=27% Similarity=0.420 Sum_probs=196.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccc---------hhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG---------KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~---------~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
.+...||+|+||.||+|... +++.+|+|.+....... .+.+.+|+.++++++||||+++++++...+..+
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN 82 (267)
T ss_pred cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE
Confidence 45678999999999999875 57899999886543221 245788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+|+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 83 lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 83 IFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999843 34578888899999999999999998 999999999999999999999999999876
Q ss_pred ccCCCcc-----eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC
Q 003046 679 AVDGASH-----VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 679 ~~~~~~~-----~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
....... ......|+..|+|||.+.+..++.++|||||||++|||++|+.||....... .+ .. ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~----~~-~~~~ 227 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ---AI----FK-IGEN 227 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH---HH----HH-Hhcc
Confidence 5422111 1122358899999999998889999999999999999999999997543110 11 11 0111
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.+ +......+.+++.+|++.+|.+||++.||+++
T Consensus 228 -----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 228 -----ASPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -----CCCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 11111 12233467889999999999999999999874
No 223
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.5e-34 Score=305.14 Aligned_cols=246 Identities=26% Similarity=0.395 Sum_probs=193.6
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHH
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 610 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~ 610 (854)
..||+|+||.||+|+.. ++..||+|.+........+.+.+|+.++++++|+||+++++++..++..++|+||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 57999999999999866 57789999987665555678899999999999999999999999999999999999999999
Q ss_pred Hhhcccccccccc--cHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEecccccccCCCccee
Q 003046 611 EHLYGTLTHEQRI--NWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 611 ~~L~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+++.... ..+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++........ ..
T Consensus 94 ~~l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~-~~ 166 (268)
T cd06624 94 ALLRSKW---GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP-CT 166 (268)
T ss_pred HHHHHhc---ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-cc
Confidence 9986431 223 6778888999999999999998 9999999999999986 67999999999875533222 12
Q ss_pred ecccccccccCccccccCc--CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 688 SIVRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~--~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
....|++.|+|||++.... ++.++||||||+++|||++|+.||...... ....+...... ..+
T Consensus 167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~----~~~~~~~~~~~-------~~~---- 231 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP----QAAMFKVGMFK-------IHP---- 231 (268)
T ss_pred ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh----hhhHhhhhhhc-------cCC----
Confidence 2335889999999987643 788999999999999999999998643211 11111111000 001
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+.+++.+|++.+|++||++.||+++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 1112223457889999999999999999999875
No 224
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.6e-33 Score=305.73 Aligned_cols=251 Identities=23% Similarity=0.339 Sum_probs=198.6
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.|.+.++||+|+||.||+|+.. +++.||+|++..........+.+|+.+++.++||||+++++.+..++..++||||++
T Consensus 13 ~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (292)
T cd06644 13 VWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCP 92 (292)
T ss_pred hhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCC
Confidence 4567788999999999999886 488999999876655556778899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|..++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....... .
T Consensus 93 ~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~ 165 (292)
T cd06644 93 GGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-Q 165 (292)
T ss_pred CCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc-c
Confidence 99998877432 34588999999999999999999998 99999999999999999999999999986543221 1
Q ss_pred eeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 686 VSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
......+++.|+|||++. ...++.++|||||||++|||++|+.||...... ...... ..........
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~~~~-~~~~~~~~~~ 237 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKI-AKSEPPTLSQ 237 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-------HHHHHH-hcCCCccCCC
Confidence 222345889999999985 345678999999999999999999998654311 111111 1111111110
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+......+.+++.+|++.+|++||++.||+++
T Consensus 238 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 238 -------PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred -------CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11223357889999999999999999999875
No 225
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.5e-34 Score=316.30 Aligned_cols=257 Identities=19% Similarity=0.301 Sum_probs=193.4
Q ss_pred hhcccccc--CcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 530 LEKKIGSG--GFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 530 ~~~~iG~G--~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.++||+| +|++||++..+ +|+.||+|++..... .....+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 78899999875 689999999875432 22356778999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.++++|||..........
T Consensus 82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999985432 23478899999999999999999998 999999999999999999999999986543221111
Q ss_pred c------eeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 685 H------VSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 685 ~------~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..... .+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~-----~~~~~ 228 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM---LLEKL-----NGTVP 228 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH---HHHHh-----cCCcc
Confidence 0 1112346788999999976 4688999999999999999999999975431110 00000 00000
Q ss_pred ccc-------------------CCcc-----------------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GII-------------------DPSL-----------------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~i-------------------d~~l-----------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+ +... ...........+.+++.+|++.||++|||+.||+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 229 CLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred ccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000 0000 001112233468899999999999999999999986
No 226
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.3e-35 Score=325.68 Aligned_cols=248 Identities=23% Similarity=0.352 Sum_probs=191.7
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.||+|+||.||++..+ +++.||||+++... ......+..|+.++..++||||+++++.+...+..++||||++
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP 84 (360)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 4578999999999999876 58899999997532 2234567789999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc-
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS- 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~- 684 (854)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 85 GGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred CccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 9999999843 45688889999999999999999998 999999999999999999999999999864322110
Q ss_pred ---------------------------------ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccc
Q 003046 685 ---------------------------------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 731 (854)
Q Consensus 685 ---------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~ 731 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 00123469999999999999999999999999999999999999997
Q ss_pred cccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 003046 732 NEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS---ISEVLKD 799 (854)
Q Consensus 732 ~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs---m~eV~~~ 799 (854)
..........+..|. ..+ .+.+. . .....+.+++.+|+. +|.+|++ +.|+.+|
T Consensus 238 ~~~~~~~~~~i~~~~------~~~--~~p~~----~--~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 238 SETPQETYRKVMNWK------ETL--VFPPE----V--PISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCHHHHHHHHHcCC------Cce--ecCCC----C--CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 654222111111110 000 01111 0 012245666666654 9999985 6777776
No 227
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.5e-34 Score=312.02 Aligned_cols=259 Identities=23% Similarity=0.317 Sum_probs=197.0
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.||+|+||.||++... ++..+|+|.+.... .....++.+|++++++++||||+++++++..++..++||||+++
T Consensus 4 ~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~ 83 (308)
T cd06615 4 EKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 83 (308)
T ss_pred eEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCC
Confidence 45678999999999999876 57889999886542 22345688899999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++.. ...+++..+..++.|+++||.|||+.+ +++||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (308)
T cd06615 84 GSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 154 (308)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc---
Confidence 999999853 355788889999999999999999732 89999999999999999999999999987543321
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc----------
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ---------- 756 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~---------- 756 (854)
.....|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ....+...........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK----ELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh----hHHHhhcCccccccccCCcccccCCC
Confidence 22346899999999998888999999999999999999999998643311 1111111000000000
Q ss_pred ----------cccCCcc---cCcC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 757 ----------GIIDPSL---LDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 757 ----------~~id~~l---~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
+..+... .... .......+.+++.+|++.+|++||++.||+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000 0000 001223588999999999999999999999873
No 228
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.4e-34 Score=322.71 Aligned_cols=262 Identities=19% Similarity=0.247 Sum_probs=198.2
Q ss_pred HHHHHHhhccccccCcEEEEEEEEC---CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
....+.+.+.||+|+||.||++... .+..||||.+... ....+|++++++++||||+++++++......++|
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 3445677889999999999999754 3578999987532 3457899999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
||++. ++|.+++. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 165 ~e~~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 165 MPKYK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred ehhcC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 99986 68888872 345689999999999999999999998 99999999999999999999999999997554
Q ss_pred CCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc--cc
Q 003046 681 DGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI--QG 757 (854)
Q Consensus 681 ~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~--~~ 757 (854)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.........+..-.. .+..... ..
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~-~~~~~~~~~~~ 315 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR-CMQVHPLEFPQ 315 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHH-HhccCccccCC
Confidence 33222 22345699999999999999999999999999999999999999976543221111111111 0000000 00
Q ss_pred -----------ccCCcccCcCC-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 -----------IIDPSLLDEYD-------IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 -----------~id~~l~~~~~-------~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.......+. ......+.+++.+|++.+|++||++.|++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000000 0112356788999999999999999999987
No 229
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-34 Score=318.95 Aligned_cols=189 Identities=22% Similarity=0.343 Sum_probs=161.3
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.|.+.+.||+|+||.||+|+.. +++.||+|+... .....|+.++++++||||+++++++...+..++|+|++.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 4566789999999999999886 467899997432 234579999999999999999999999999999999995
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++.. ....+++..+..|+.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 141 -~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~ 211 (357)
T PHA03209 141 -SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--P 211 (357)
T ss_pred -CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC--c
Confidence 688888743 245688999999999999999999998 9999999999999999999999999999753322 1
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf 730 (854)
......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 223346899999999999999999999999999999999865554
No 230
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.1e-34 Score=304.72 Aligned_cols=249 Identities=25% Similarity=0.400 Sum_probs=197.1
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCc------cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
...+.||+|+||.||+|...+++.+|||.+..... .....+.+|++++++++|+||+++++++.+.+..++|+|
T Consensus 3 ~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (265)
T cd06631 3 TKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFME 82 (265)
T ss_pred cccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEe
Confidence 34678999999999999988899999998864321 122458889999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||+++.....
T Consensus 83 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 83 FVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999843 24578888899999999999999998 9999999999999999999999999998754221
Q ss_pred C-----cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 683 A-----SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 683 ~-----~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
. ........|+..|+|||++.+..++.++|||||||++|||++|+.||....... .........+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~~~~~~~--- 226 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA------AMFYIGAHRGL--- 226 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH------HHHHhhhccCC---
Confidence 1 111223458999999999999889999999999999999999999997543111 10000000011
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.+... ....+.+++.+|++.+|++||++.|++++
T Consensus 227 --~~~~~~~----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 227 --MPRLPDS----FSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred --CCCCCCC----CCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111222 23457889999999999999999999864
No 231
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.1e-34 Score=308.13 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=199.8
Q ss_pred HhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
...+.||+|+||.||+|+.+ +.+.||+|.+...... ....+.+|++++++++|+||+++++++...+..++||
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 87 (275)
T cd05046 8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMIL 87 (275)
T ss_pred eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEE
Confidence 34678999999999999865 2467999988654332 3467899999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccc-----cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 602 EFMHNGTLKEHLYGTLTH-----EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||++
T Consensus 88 e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 88 EYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccccc
Confidence 999999999998643211 12689999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCc
Q 003046 677 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
+..............++..|+|||.+.+..++.++||||||+++|||++ |..||..... ..++.. ...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~----~~~~~~----~~~~~~ 236 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD----EEVLNR----LQAGKL 236 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch----HHHHHH----HHcCCc
Confidence 7543322222233346788999999988888999999999999999999 7888864331 122221 111211
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.... .. .....+.+++.+|++.+|++||++.|+++.|.
T Consensus 237 ~~~~----~~----~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 237 ELPV----PE----GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCC----CC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111 11 12246889999999999999999999999885
No 232
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.5e-34 Score=319.68 Aligned_cols=262 Identities=23% Similarity=0.299 Sum_probs=192.5
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecC------eE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------~~ 597 (854)
.|.+.+.||+|+||.||++... +++.||||++... .......+.+|+.+++.++||||+++++++...+ ..
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 101 (359)
T cd07876 22 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDV 101 (359)
T ss_pred ceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccccee
Confidence 4556789999999999999875 5889999998643 2233456778999999999999999999986543 46
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 102 ~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 102 YLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred EEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 999999975 5655553 2367778889999999999999998 99999999999999999999999999997
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccch---------------
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI--------------- 742 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l--------------- 742 (854)
..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+
T Consensus 172 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 172 TACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 54322 1223346899999999999999999999999999999999999999754311100000
Q ss_pred HHHHHHhhhcC-Cc-----ccccCCccc---CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 743 VQWAKLHIESG-DI-----QGIIDPSLL---DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 743 ~~~~~~~~~~~-~~-----~~~id~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
........... .. .+....... ..........+.+++.+|++.||++|||+.|+++|-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 00011000000 00 000000000 000111234578999999999999999999999873
No 233
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.3e-34 Score=303.78 Aligned_cols=238 Identities=24% Similarity=0.416 Sum_probs=188.7
Q ss_pred ccccccCcEEEEEEEECCCc-----------EEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 532 KKIGSGGFGVVYYGKLKDGK-----------EIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~-----------~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
+.||+|+||.||+|.+.+.. .|++|++...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999886433 5788877644333 6778899999999999999999999988 778999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-------cEEEEEe
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-------RAKVSDF 673 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-------~~kL~DF 673 (854)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 79 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 79 EEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCC
Confidence 9999999999998642 22678889999999999999999998 999999999999999888 7999999
Q ss_pred cccccccCCCcceeecccccccccCccccccC--cCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhh
Q 003046 674 GLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ--QLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 674 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
|+++.... .....++..|+|||++.+. .++.++|||||||++|||++ |..||...... ....+..
T Consensus 153 g~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~----~~~~~~~--- 220 (259)
T cd05037 153 GIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS----EKERFYQ--- 220 (259)
T ss_pred Cccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch----hHHHHHh---
Confidence 99875433 1223467889999999876 78999999999999999999 57777554311 1111111
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
..... .. .....+.+++.+|+..+|.+||++.||++.|+
T Consensus 221 ~~~~~---------~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 DQHRL---------PM---PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred cCCCC---------CC---CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000 00 01156889999999999999999999998873
No 234
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.5e-34 Score=312.77 Aligned_cols=253 Identities=25% Similarity=0.418 Sum_probs=196.8
Q ss_pred hhccccccCcEEEEEEEEC-CCc----EEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~----~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
..+.||+|+||.||+|.+. +++ .||+|++..... ....++.+|+.++++++||||++++++|... ...+++||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehh
Confidence 4578999999999999864 343 478888765432 2234688999999999999999999998754 46799999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 90 MPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred cCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccCcc
Confidence 9999999998532 34578889999999999999999998 99999999999999999999999999998654332
Q ss_pred cce-eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 684 SHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 684 ~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.+... ..+..+.. .+.... .
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~----~~~~~~~~----~~~~~~--~- 232 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT----REIPDLLE----KGERLP--Q- 232 (303)
T ss_pred cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHH----CCCCCC--C-
Confidence 221 122345778999999999999999999999999999997 8999865431 12222221 111100 0
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.. .....+.+++..|+..+|++||+|.++++.|+.+...
T Consensus 233 --~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 233 --PP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred --CC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01 1223578899999999999999999999999986543
No 235
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.4e-34 Score=304.16 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=200.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~lV~e~ 603 (854)
.+.+.||.|+||.||++... +++.+|+|++.... ......+..|++++++++||||+++++++.. ....+++|||
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~ 82 (265)
T cd08217 3 EVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEY 82 (265)
T ss_pred eeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehh
Confidence 35678999999999999865 67899999986542 2334568889999999999999999998754 4567899999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC--CCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC--VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
+++++|.+++.........+++..++.++.|++.||+|||..+ ..+++|+||||+||+++.++.+||+|||++.....
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 83 CEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred ccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence 9999999999655444567899999999999999999999322 23999999999999999999999999999986544
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.... .....|+..|+|||.+.+..++.++||||||+++++|++|+.||..... ..+.+. ...+...
T Consensus 163 ~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~----~~~~~~~----- 228 (265)
T cd08217 163 DSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ----LQLASK----IKEGKFR----- 228 (265)
T ss_pred Cccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH----HHHHHH----HhcCCCC-----
Confidence 3321 2234589999999999998899999999999999999999999975431 122221 1112111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+.+++.+|++.+|++||++.+|+++
T Consensus 229 ----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 ----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1122233568899999999999999999999875
No 236
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.3e-34 Score=311.05 Aligned_cols=247 Identities=24% Similarity=0.371 Sum_probs=199.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
.+.+.||.|+||.||+|... +++.||+|.+..........+.+|+.+++.++|||++++++++...+..++|+||++++
T Consensus 22 ~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 101 (296)
T cd06655 22 TRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGG 101 (296)
T ss_pred EEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCC
Confidence 34578999999999999864 68999999987655555667889999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++. ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........ ..
T Consensus 102 ~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~ 172 (296)
T cd06655 102 SLTDVVT-----ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KR 172 (296)
T ss_pred cHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cC
Confidence 9999884 23578999999999999999999998 999999999999999999999999999875443322 12
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....|+..|+|||.+.+..++.++|||||||++|+|++|+.||....... .+ ....... ... + ..
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~---~~----~~~~~~~-~~~-----~--~~ 237 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---AL----YLIATNG-TPE-----L--QN 237 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH----HHHHhcC-Ccc-----c--CC
Confidence 23458899999999998889999999999999999999999997644111 11 1111110 000 0 00
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+......+.+++.+|+..+|++||++.+|+++
T Consensus 238 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 238 PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred cccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 11122357789999999999999999999875
No 237
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.1e-34 Score=309.97 Aligned_cols=265 Identities=21% Similarity=0.261 Sum_probs=199.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+.+.||+|+||.||+|..+ +++.||||+++... ......+.+|++++++++|+||+++++++..++..++||||+
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 82 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV 82 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecC
Confidence 345678999999999999887 57899999886532 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+++.+..+.. ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++........
T Consensus 83 ~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 83 ERTLLELLEA----SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9877766553 234578899999999999999999998 999999999999999999999999999986654433
Q ss_pred ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH--------hhhcCC-
Q 003046 685 HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL--------HIESGD- 754 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~--------~~~~~~- 754 (854)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||......+....+...... ......
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 233344578999999999888 8899999999999999999999999754321111111110000 000000
Q ss_pred ----cccccCCcc-cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 ----IQGIIDPSL-LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ----~~~~id~~l-~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+..++.. ...++.....++.+++.+|+..+|++||++++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000000 001111224678999999999999999999999864
No 238
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.6e-34 Score=307.63 Aligned_cols=240 Identities=24% Similarity=0.400 Sum_probs=188.1
Q ss_pred ccccccCcEEEEEEEECC--------CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~--------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.||+|+||.||+|..+. ...||+|.+..........+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999997642 234888887655444456788899999999999999999999998999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc--------EEEEEecc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--------AKVSDFGL 675 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--------~kL~DFGl 675 (854)
+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. ++++|||+
T Consensus 81 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999998643 23578889999999999999999998 9999999999999987765 69999998
Q ss_pred cccccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCC-cccccccccccccchHHHHHHhhhcC
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQ-EAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~-~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
+...... ....++..|+|||++.+ ..++.++|||||||++|||++|. .|+...... .... .....
T Consensus 155 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~----~~~~----~~~~~ 221 (258)
T cd05078 155 SITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ----KKLQ----FYEDR 221 (258)
T ss_pred ccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH----HHHH----HHHcc
Confidence 8644321 22457889999999986 45789999999999999999995 555432210 0011 01110
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
. ..+.....++.+++.+|++.+|++||+++++++.|+
T Consensus 222 -------~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -------H----QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -------c----cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 011112245789999999999999999999999873
No 239
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.5e-34 Score=311.02 Aligned_cols=197 Identities=24% Similarity=0.382 Sum_probs=159.6
Q ss_pred hccccccCcEEEEEEEEC---CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEEEEEecC
Q 003046 531 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~lV~e~~~ 605 (854)
+.+||+|+||.||+|+.+ ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999875 35789999886442 23457889999999999999999998853 557899999987
Q ss_pred CCCHHHhhcccc-----cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE----cCCCcEEEEEeccc
Q 003046 606 NGTLKEHLYGTL-----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLS 676 (854)
Q Consensus 606 ~gsL~~~L~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~~kL~DFGla 676 (854)
+ +|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 7777663211 1233578889999999999999999998 99999999999999 56679999999999
Q ss_pred ccccCCCcc--eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003046 677 KFAVDGASH--VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 677 ~~~~~~~~~--~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~ 733 (854)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 865433221 1233468999999999876 45789999999999999999999999643
No 240
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.3e-33 Score=305.09 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=195.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeee-----ecCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQ-----EEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~-----~~~~~~lV 600 (854)
+.+.+.||+|+||.||++... +++.+|+|++.... ....++.+|+.+++++ +||||+++++++. .++..++|
T Consensus 20 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv 98 (286)
T cd06638 20 WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLV 98 (286)
T ss_pred eeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEE
Confidence 345678999999999999876 57899999876432 2245678899999999 6999999999884 34568999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++++|.+++.........+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (286)
T cd06638 99 LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175 (286)
T ss_pred EeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence 999999999998865444456788899999999999999999998 99999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||....... .+.. ......
T Consensus 176 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~---~~~~-----~~~~~~ 246 (286)
T cd06638 176 STR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR---ALFK-----IPRNPP 246 (286)
T ss_pred cCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH---HHhh-----ccccCC
Confidence 322 12233458999999999853 457889999999999999999999987543111 1111 001110
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
....++. .....+.+++.+|++.+|++||++.||++++
T Consensus 247 ~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 247 PTLHQPE-------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CcccCCC-------CcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1111111 1123578999999999999999999999864
No 241
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.9e-34 Score=318.99 Aligned_cols=253 Identities=21% Similarity=0.238 Sum_probs=194.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+++.+ +++.||+|++.... ......+.+|+.++..++|+||+++++++...+..++||||
T Consensus 3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey 82 (331)
T cd05624 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDY 82 (331)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence 345688999999999999876 57889999986532 22234578899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 83 YVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred CCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999998532 34678888899999999999999998 99999999999999999999999999997654433
Q ss_pred cceeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
........||+.|+|||++.+ +.++.++|||||||++|||++|+.||......+ ............ .
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-------~~~~i~~~~~~~-~ 228 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-------TYGKIMNHEERF-Q 228 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH-------HHHHHHcCCCcc-c
Confidence 333334569999999999875 467889999999999999999999997544211 111111111000 0
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~ 799 (854)
+.+.. . .....+.+++.+|+..++++ |++++++.+|
T Consensus 229 ~p~~~-~----~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHI-T----DVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCcc-c----cCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11111 1 12345777888888765544 5689999877
No 242
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.6e-34 Score=300.89 Aligned_cols=249 Identities=23% Similarity=0.378 Sum_probs=198.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee-cCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-EGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~lV~e~ 603 (854)
|.+.+.||+|++|.||++..+ +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. +...++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 346788999999999999876 57889999986542 2334568889999999999999999998764 4467899999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++... ....+++.++..++.+++.||++||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 82 CEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 9999999998642 234588999999999999999999998 99999999999999999999999999997654322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......|++.|+|||++.+..++.++|||||||+++||++|+.||..... ....... ..+.+.
T Consensus 157 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-------~~~~~~~-~~~~~~------- 220 (257)
T cd08223 157 D-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-------NSLVYRI-IEGKLP------- 220 (257)
T ss_pred C-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHH-HhcCCC-------
Confidence 2 22334588999999999999999999999999999999999999875431 1111111 112111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+.+++.+|++.+|++||++.+++++
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 --PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred --CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1112233468899999999999999999999875
No 243
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=8.8e-34 Score=305.57 Aligned_cols=251 Identities=24% Similarity=0.346 Sum_probs=200.0
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.+.||+|+||.||+|... +++.+|+|++..........+..|++++++++||||+++++++..+...++||||++
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence 4667788999999999999875 688999999876555555678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++........
T Consensus 86 ~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 86 GGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred CCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc-
Confidence 99999988532 34588999999999999999999998 999999999999999999999999999865433221
Q ss_pred eeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 686 VSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
......|+..|+|||.+. ...++.++|||||||++|||++|+.||...... +.+.. ...+...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~---~~~~~-----~~~~~~~---- 226 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM---RVLLK-----ILKSEPP---- 226 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH---HHHHH-----HhcCCCC----
Confidence 223345899999999975 345678999999999999999999999754311 11111 1111111
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+. .+......+.+++..|++.+|++||++.+|+++
T Consensus 227 -~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 -TLD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -CcC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000 011122357789999999999999999999886
No 244
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-34 Score=299.48 Aligned_cols=250 Identities=25% Similarity=0.300 Sum_probs=205.3
Q ss_pred HhhccccccCcEEEEEEEECC-CcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
++.+.||+|.-|+||++++++ +...|+|++.+.... .......|-+||+.+.||.+..|++.+..++..+||||||
T Consensus 80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyC 159 (459)
T KOG0610|consen 80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYC 159 (459)
T ss_pred HHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecC
Confidence 356789999999999999884 578999999876433 2345677999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC---
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD--- 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~--- 681 (854)
+||+|...++. +..+.+++..+.-++.+++-||+|||.. |||+|||||+||||.++|++.|+||.|+....-
T Consensus 160 pGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 160 PGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred CCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 99999988864 4577899999999999999999999998 999999999999999999999999998742210
Q ss_pred ------------------------------CCc----------------------ceeecccccccccCccccccCcCCC
Q 003046 682 ------------------------------GAS----------------------HVSSIVRGTVGYLDPEYYISQQLTD 709 (854)
Q Consensus 682 ------------------------------~~~----------------------~~~~~~~gt~~Y~aPE~~~~~~~s~ 709 (854)
... ..+...+||-.|+|||++.+...+.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs 314 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS 314 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence 000 0112245999999999999999999
Q ss_pred cchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCC
Q 003046 710 KSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHM 789 (854)
Q Consensus 710 ~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~ 789 (854)
++|.|+|||++|||+.|..||.+.+..+...+++. +.+.-.........+.+||.+.+.+||++
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~----------------~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG----------------QPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc----------------CCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 99999999999999999999988774444444433 11111112244567889999999999999
Q ss_pred CCC----HHHHHHH
Q 003046 790 RPS----ISEVLKD 799 (854)
Q Consensus 790 RPs----m~eV~~~ 799 (854)
|-. +.||.+|
T Consensus 379 Rlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 379 RLGSKRGAAEIKRH 392 (459)
T ss_pred hhccccchHHhhcC
Confidence 998 8888877
No 245
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.1e-34 Score=307.98 Aligned_cols=264 Identities=23% Similarity=0.259 Sum_probs=194.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|++|.||+|+.. +++.||||+++.... .....+.+|+.++++++||||+++++++..++..++||||++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 82 (285)
T cd07861 3 TKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS 82 (285)
T ss_pred eEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC
Confidence 34578999999999999876 688999999864322 223567889999999999999999999999999999999997
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++... .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....... .
T Consensus 83 -~~l~~~~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~ 156 (285)
T cd07861 83 -MDLKKYLDSL-PKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-R 156 (285)
T ss_pred -CCHHHHHhcC-CCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-c
Confidence 6888887543 2235688999999999999999999998 99999999999999999999999999987543321 1
Q ss_pred eeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh----hh--------c
Q 003046 686 VSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH----IE--------S 752 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~----~~--------~ 752 (854)
......+++.|+|||.+.+. .++.++|||||||++|||++|+.||................... +. .
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 12223478999999988754 57889999999999999999999997543211110110000000 00 0
Q ss_pred CCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 753 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 753 ~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..........+. ........++.+++.+|++.||++|||+.+|+++
T Consensus 237 ~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 237 NTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000000 0001123456799999999999999999999864
No 246
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.8e-34 Score=317.78 Aligned_cols=252 Identities=22% Similarity=0.256 Sum_probs=192.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.++||+|+||.||+++.+ +++.+|+|++.... ......+.+|+.++..++|+||+++++++...+..++||||+
T Consensus 4 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~ 83 (332)
T cd05623 4 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYY 83 (332)
T ss_pred eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEecc
Confidence 45688999999999999887 47789999986432 222345788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 84 VGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred CCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999999532 34578888899999999999999998 999999999999999999999999999875443333
Q ss_pred ceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 685 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||......+ ............. +
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~-------~~~~i~~~~~~~~-~ 229 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-------TYGKIMNHKERFQ-F 229 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH-------HHHHHhCCCcccc-C
Confidence 3334456999999999986 3467889999999999999999999997544211 1111111110000 0
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLP--HGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~--~P~~RPsm~eV~~~ 799 (854)
. ... ......+.+++.+|+.. ++..||++.|+++|
T Consensus 230 p-~~~----~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 230 P-AQV----TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred C-Ccc----ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 000 11223466777777654 44447899999988
No 247
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.3e-34 Score=302.80 Aligned_cols=248 Identities=21% Similarity=0.361 Sum_probs=198.8
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.||+|+||.||+++.. +++.+|+|.++... ....+.+..|+.+++.++|+||+++++.+..++..++||||+++
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 82 (255)
T cd08219 3 NVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDG 82 (255)
T ss_pred eEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCC
Confidence 35688999999999999876 68899999986432 33456778899999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ....+++.....++.|++.||.|||+. +++|+||||+||++++++.++|+|||+++...... ..
T Consensus 83 ~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~ 156 (255)
T cd08219 83 GDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY 156 (255)
T ss_pred CcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence 9999988532 234578888999999999999999998 99999999999999999999999999987554322 12
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....|++.|+|||++.+..++.++||||||+++|+|++|..||...... ... . ....+.... +
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~----~~~---~-~~~~~~~~~-~------- 220 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK----NLI---L-KVCQGSYKP-L------- 220 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH----HHH---H-HHhcCCCCC-C-------
Confidence 23345889999999999888999999999999999999999999754311 111 1 111121111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+......+.+++.+|++.+|++||++.+|+..
T Consensus 221 -~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 -PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11122357789999999999999999999864
No 248
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.3e-33 Score=304.90 Aligned_cols=264 Identities=22% Similarity=0.279 Sum_probs=197.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|++++++++|||++++++++......++||||+
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~ 82 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC 82 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence 345678999999999999887 58899999986432 223456789999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+++.|..++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~l~~~~~----~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 83 DHTVLNELEK----NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred CccHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 9988887763 234588999999999999999999998 999999999999999999999999999976543321
Q ss_pred ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh-------hhcCC-c
Q 003046 685 HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------IESGD-I 755 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~-------~~~~~-~ 755 (854)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+....+....... ..... .
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 1223347889999999876 557889999999999999999999997544211111111110000 00000 0
Q ss_pred ccccCCcccCcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+......+. .....+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00001111111111 123467899999999999999999999865
No 249
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.6e-34 Score=321.07 Aligned_cols=261 Identities=23% Similarity=0.306 Sum_probs=193.1
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~ 597 (854)
.|.+.+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++... ...
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~ 104 (364)
T cd07875 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 104 (364)
T ss_pred ceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeE
Confidence 4556789999999999999875 58899999987532 23345677899999999999999999987543 357
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 105 ~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 105 YIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred EEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 999999975 6766663 2367788889999999999999998 99999999999999999999999999997
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH-------------
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ------------- 744 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~------------- 744 (854)
..... .......||..|+|||++.+..++.++|||||||++|||++|+.||......+....+..
T Consensus 175 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 175 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 54332 122334689999999999999999999999999999999999999975442111111110
Q ss_pred --HHHHhhhcC-Cccc----ccCCccc----CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 745 --WAKLHIESG-DIQG----IIDPSLL----DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 745 --~~~~~~~~~-~~~~----~id~~l~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... .... .+.+... ..........+.+++.+|++.||.+|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 0000 0000000 00111123467899999999999999999999987
No 250
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.3e-34 Score=311.64 Aligned_cols=263 Identities=22% Similarity=0.312 Sum_probs=195.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||.||+|+.+ +++.||+|.++... ......+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~ 87 (301)
T cd07873 8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 87 (301)
T ss_pred eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc
Confidence 445678999999999999876 57899999987443 2233467789999999999999999999999999999999997
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 88 -~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 88 -KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred -cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-
Confidence 5888887532 34578888999999999999999998 999999999999999999999999999875432221
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC----
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID---- 760 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id---- 760 (854)
......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+....... .......+++
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 238 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTP-TEETWPGILSNEEF 238 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC-Chhhchhhhccccc
Confidence 1223347899999999875 457889999999999999999999997554211111111100000 0000000000
Q ss_pred -----CcccCc----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 -----PSLLDE----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 -----~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+..... ........+.+++.+|++.+|.+|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000 001122357799999999999999999999985
No 251
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.9e-34 Score=318.84 Aligned_cols=261 Identities=22% Similarity=0.303 Sum_probs=193.3
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~ 597 (854)
.|.+.+.||+|+||.||++... .++.||||++.... ......+.+|+.+++.++||||+++++++... ...
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 97 (355)
T cd07874 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDV 97 (355)
T ss_pred ceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccccee
Confidence 4455788999999999999865 58899999986532 22345677899999999999999999988643 356
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 98 ~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 98 YLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred EEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 999999975 6666653 2467888889999999999999998 99999999999999999999999999997
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH-------------
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ------------- 744 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~------------- 744 (854)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....++.
T Consensus 168 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 168 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 54332 222334689999999999999999999999999999999999999976442111111100
Q ss_pred --HHHHhhhc-CCcccccCCcc-----c---CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 745 --WAKLHIES-GDIQGIIDPSL-----L---DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 745 --~~~~~~~~-~~~~~~id~~l-----~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ ........+.. . ..........+.+++.+|++.||++|||+.|+++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00111110 00000000000 0 00111123467899999999999999999999997
No 252
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=7.8e-34 Score=301.17 Aligned_cols=249 Identities=31% Similarity=0.501 Sum_probs=199.8
Q ss_pred hhccccccCcEEEEEEEECC-----CcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 530 LEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~-----~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.||+|+||.||+++..+ +..||+|++...... ....+..|+++++.++|+||+++++++...+..+++|||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 45789999999999998864 378999999755433 466889999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++......
T Consensus 83 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 83 MEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred cCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 99999999985422 12289999999999999999999998 99999999999999999999999999997665442
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
........++..|+|||.+.+..++.++||||+||+++||++ |+.||..... ..+.+.. ..+.....
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~----~~~~~~~----~~~~~~~~---- 225 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN----EEVLEYL----KKGYRLPK---- 225 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH----hcCCCCCC----
Confidence 222222337889999999988889999999999999999998 7888865331 1222211 11111110
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.......+.+++.+|+..+|++|||+.|+++.|
T Consensus 226 -----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 -----PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111334688899999999999999999998864
No 253
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.1e-33 Score=301.04 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=201.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|... +++.+|+|++..........+.+|++++++++||||+++++++...+..+++|||+++
T Consensus 5 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~ 84 (262)
T cd06613 5 YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGG 84 (262)
T ss_pred eEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCC
Confidence 445678999999999999875 5788999999866555567889999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++....... ..
T Consensus 85 ~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~ 157 (262)
T cd06613 85 GSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AK 157 (262)
T ss_pred CcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh-hc
Confidence 9999988532 24688889999999999999999998 99999999999999999999999999987544321 12
Q ss_pred eecccccccccCccccccC---cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 687 SSIVRGTVGYLDPEYYISQ---QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~---~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.....++..|+|||.+... .++.++|||||||++|||++|+.||....... ..... ..... ..+.+
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~---~~~~~-----~~~~~---~~~~~ 226 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR---ALFLI-----SKSNF---PPPKL 226 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH-----HhccC---CCccc
Confidence 2234588899999999876 88999999999999999999999997543111 11110 11100 00111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ........+.+++.+|+..+|.+||++.+|+.+
T Consensus 227 ~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 K--DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred c--chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1 122334568899999999999999999999864
No 254
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.1e-33 Score=300.36 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=201.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||.++.. +++.+++|.+.... ......+.+|++++++++|+||+++++++...+..+++|||++
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~ 82 (256)
T cd08221 3 IPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYAN 82 (256)
T ss_pred eEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecC
Confidence 34678999999999999765 58899999886442 3345678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 83 GGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred CCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 999999986432 34678899999999999999999998 999999999999999999999999999976544332
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......|++.|+|||++.+..++.++||||||+++|||++|..||...... +...... .+.....
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-------~~~~~~~-~~~~~~~------- 221 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-------NLVVKIV-QGNYTPV------- 221 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHH-cCCCCCC-------
Confidence 223345899999999999888999999999999999999999999754311 1111111 1211110
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.......+.+++.+|++.+|++||++.|+++++
T Consensus 222 --~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 --VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred --ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 112234578899999999999999999999864
No 255
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.2e-34 Score=305.76 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=201.8
Q ss_pred HHHHhhccccccCcEEEEEEEECC-Cc----EEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKD-GK----EIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~----~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
..+.+.+.||+|+||.||+|.+++ ++ .+|+|++..... .....+.+|++++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 344567899999999999998752 33 589998865543 334678899999999999999999999987 78899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 99999999999998532 33588999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCccee-ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 680 VDGASHVS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 680 ~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
........ ....++..|+|||.+....++.++|||||||++||+++ |+.||..... ..+.+.. ..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~----~~~~~~- 230 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA----VEIPDLL----EKGERL- 230 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH----HHHHHHH----hCCCCC-
Confidence 43322221 12224678999999988899999999999999999999 9999976442 1222221 111110
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+......+.+++.+|+..+|.+||++.++++.|+.+..
T Consensus 231 --------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 --------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0011122357889999999999999999999999998743
No 256
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.1e-34 Score=306.42 Aligned_cols=261 Identities=23% Similarity=0.294 Sum_probs=199.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 345678999999999999875 68999999987553 223467889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+++|.+++... ...+++.++..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 82 -~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 82 -PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred -CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 99999988532 25588999999999999999999998 999999999999999999999999999976544332
Q ss_pred ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC---------C
Q 003046 685 HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG---------D 754 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~---------~ 754 (854)
.......|+..|+|||++.+. .++.++||||+||+++||++|..+|....... ...+........ .
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE----QLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH----HHHHHHHHcCCCChHHHhhccC
Confidence 223334689999999998754 46889999999999999999988886543111 111111110000 0
Q ss_pred c---ccccCCccc----CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 I---QGIIDPSLL----DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~---~~~id~~l~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+ ..+..+.-. .....+....+.+++.+|++.+|++||+++++++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 000000000 00001123678899999999999999999999876
No 257
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.5e-34 Score=310.24 Aligned_cols=245 Identities=25% Similarity=0.378 Sum_probs=197.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
...||+|+||.||++... +++.||||++........+.+.+|+.++++++|+||+++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 357999999999999875 5889999998765545566788999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ ....
T Consensus 107 ~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~ 177 (292)
T cd06658 107 TDIVT-----HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKS 177 (292)
T ss_pred HHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCce
Confidence 99873 23578889999999999999999998 999999999999999999999999999875433222 1223
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....-... .+.+.+....
T Consensus 178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~---------~~~~~~~~~~-- 242 (292)
T cd06658 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL----QAMRRIRD---------NLPPRVKDSH-- 242 (292)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHh---------cCCCcccccc--
Confidence 45899999999998888999999999999999999999999754311 11111111 0111111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.+++.+|+..+|++|||+.|++++
T Consensus 243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 243 KVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 122357788999999999999999999986
No 258
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.1e-34 Score=339.80 Aligned_cols=255 Identities=25% Similarity=0.354 Sum_probs=196.5
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLV 600 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~lV 600 (854)
..|.+.+.||+|+||+||+|+.. .++.||+|++.... ......+..|+.++++++||||++++++|.. ....++|
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence 34566789999999999999876 56789999886542 2234568899999999999999999998854 3568999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCC----CceeccCCCCCCeEEcC------------
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV----PAIIHRDLKSSNILLDK------------ 664 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivHrDIkp~NILl~~------------ 664 (854)
|||+++|+|.++|.........+++..++.|+.||+.||+|||+.+. .+|+||||||+||||+.
T Consensus 93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~ 172 (1021)
T PTZ00266 93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA 172 (1021)
T ss_pred EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence 99999999999996544445678999999999999999999998521 25999999999999964
Q ss_pred -----CCcEEEEEecccccccCCCcceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccc
Q 003046 665 -----HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGA 737 (854)
Q Consensus 665 -----~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~ 737 (854)
.+.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||+||||++|+.||....
T Consensus 173 ~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~--- 247 (1021)
T PTZ00266 173 NNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN--- 247 (1021)
T ss_pred cccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC---
Confidence 235899999999765332 12234569999999999864 458899999999999999999999996533
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....... .+..+.. .. ... ....+.+|+..||+.+|.+||++.|++++
T Consensus 248 ---~~~qli~-~lk~~p~-----lp-i~~----~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 248 ---NFSQLIS-ELKRGPD-----LP-IKG----KSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred ---cHHHHHH-HHhcCCC-----CC-cCC----CCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 1111111 1111110 00 011 12457899999999999999999999854
No 259
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.1e-33 Score=302.45 Aligned_cols=246 Identities=25% Similarity=0.393 Sum_probs=189.4
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-----cchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEEEE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-----QGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVY 601 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~lV~ 601 (854)
..+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.. ....++++
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~ 85 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFM 85 (266)
T ss_pred ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEE
Confidence 4678999999999999875 588999998864321 123467889999999999999999998865 35678999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++++|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 86 EYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 99999999998853 33578888899999999999999998 999999999999999999999999999875432
Q ss_pred CCc--ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GAS--HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~--~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
... .......++..|+|||++.+..++.++|||||||++|||++|+.||..... ... ........ .
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------~~~-~~~~~~~~-----~ 226 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------MAA-IFKIATQP-----T 226 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch------HHH-HHHHhcCC-----C
Confidence 111 111234588999999999988899999999999999999999999975431 111 11111111 0
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.+ +......+.+++ .|+..+|++||+|+||++|
T Consensus 227 ~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 227 NPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 1111 112223345555 7888999999999999874
No 260
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.2e-34 Score=308.80 Aligned_cols=263 Identities=22% Similarity=0.321 Sum_probs=197.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|+||++
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 83 (286)
T cd07846 4 ENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVD 83 (286)
T ss_pred eEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCC
Confidence 45678999999999999986 588999998764322 234568889999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.++... ...+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++....... .
T Consensus 84 ~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~ 155 (286)
T cd07846 84 HTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-E 155 (286)
T ss_pred ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-c
Confidence 9998877632 33488999999999999999999998 99999999999999999999999999987654332 2
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh-------hhcCCc-c
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------IESGDI-Q 756 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~-------~~~~~~-~ 756 (854)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+....+..+.... ...... .
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 2223457899999999875 457889999999999999999999986544211111111111100 000000 0
Q ss_pred cccCCcccCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEY-----DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+..+...... .......+.+++.+|++.+|++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00011100000 01123568899999999999999999999875
No 261
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.9e-34 Score=318.82 Aligned_cols=241 Identities=26% Similarity=0.315 Sum_probs=185.9
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhc---CCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRI---HHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l---~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
||+|+||+||+|+.. +++.||||++...... ....+..|..++.+. +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999876 5899999998653221 122344566666655 699999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~ 152 (330)
T cd05586 81 GELFWHLQ----KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KT 152 (330)
T ss_pred ChHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CC
Confidence 99998884 345688999999999999999999998 99999999999999999999999999987533222 22
Q ss_pred eecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .+. ..+..+.. .+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~----~~~----~~i~~~~~------~~~~ 218 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ----QMY----RNIAFGKV------RFPK 218 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH----HHH----HHHHcCCC------CCCC
Confidence 2345699999999998764 4789999999999999999999999754311 111 11111111 0100
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCC----CHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRP----SISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RP----sm~eV~~~ 799 (854)
. .....+.+++.+|++.+|++|| ++.|+++|
T Consensus 219 ~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 219 N---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred c---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 0 1123467899999999999998 56666664
No 262
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.5e-34 Score=330.02 Aligned_cols=261 Identities=19% Similarity=0.267 Sum_probs=187.8
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCC------CceeeEeeeeeec-CeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH------RNLVQFLGYCQEE-GRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H------pnIv~l~g~~~~~-~~~~ 598 (854)
.|.+.++||+|+||+||+|... .++.||||+++... ...+++..|++++++++| .+++++++++... ++.+
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 4556789999999999999875 57889999986432 223456667777777754 4588899988754 5788
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC------------
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM------------ 666 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~------------ 666 (854)
+|||++ +++|.+++.. ...+++..+..|+.||+.||+|||++ .+|+||||||+|||++.++
T Consensus 209 iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 209 IVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred EEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccC
Confidence 999987 6788888742 35688999999999999999999973 2899999999999998765
Q ss_pred ----cEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccch
Q 003046 667 ----RAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 742 (854)
Q Consensus 667 ----~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l 742 (854)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+
T Consensus 282 ~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i 357 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM 357 (467)
T ss_pred CCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 49999999875322 2223456999999999999999999999999999999999999999764421111001
Q ss_pred H--------HHHHHh--------h-hcCCcccccCCccc----C---cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 003046 743 V--------QWAKLH--------I-ESGDIQGIIDPSLL----D---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLK 798 (854)
Q Consensus 743 ~--------~~~~~~--------~-~~~~~~~~id~~l~----~---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~ 798 (854)
. .|.... + ..+.+....++... . .........+.+|+.+|++.||++|||++|+++
T Consensus 358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 0 011000 0 00000001111000 0 000011245779999999999999999999998
Q ss_pred H
Q 003046 799 D 799 (854)
Q Consensus 799 ~ 799 (854)
|
T Consensus 438 H 438 (467)
T PTZ00284 438 H 438 (467)
T ss_pred C
Confidence 6
No 263
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.6e-33 Score=301.61 Aligned_cols=247 Identities=25% Similarity=0.409 Sum_probs=198.8
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++.+++||||+++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4456678999999999999875 68899999876432 233456889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06641 85 GGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence 99999998842 3578899999999999999999998 99999999999999999999999999987554322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.......|+..|+|||++.+...+.++|||||||++|||++|..||...... .... . ...+.. +.+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~---~-~~~~~~-----~~~- 221 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM----KVLF---L-IPKNNP-----PTL- 221 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH----HHHH---H-HhcCCC-----CCC-
Confidence 1222345788999999998888899999999999999999999998653310 1111 1 111111 111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......+.+++.+|++.+|.+||++.+++++
T Consensus 222 ---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 ---EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11223457889999999999999999999996
No 264
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9e-34 Score=300.96 Aligned_cols=246 Identities=29% Similarity=0.475 Sum_probs=195.9
Q ss_pred HHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.+.||+|+||.||+|.. .++.||+|+++... ....+.+|+.++++++|||++++++++... ..++||||+++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 355678999999999999975 47889999986432 345688999999999999999999998765 47899999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 83 GNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 9999998643 234578889999999999999999998 99999999999999999999999999987543221
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....+..|+|||++.+..++.++|||||||++|||++ |+.||...... .+.. ....+....
T Consensus 155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~~~----~~~~~~~~~-------- 217 (254)
T cd05083 155 -DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK----EVKE----CVEKGYRME-------- 217 (254)
T ss_pred -CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH----HHHH----HHhCCCCCC--------
Confidence 12234578999999998899999999999999999998 99998754421 1111 111111110
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
........+.+++.+|++.+|++||++.+|++.|++
T Consensus 218 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 -PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 011223467899999999999999999999998874
No 265
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-33 Score=304.01 Aligned_cols=252 Identities=25% Similarity=0.376 Sum_probs=197.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||++... +++.||+|.++... ......+.+|++++++++||||+++++.+...+..++||||++
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMD 82 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecC
Confidence 456789999999999999887 68999999886542 2234578899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.... ....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 156 (286)
T cd06622 83 AGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--- 156 (286)
T ss_pred CCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence 999998885421 234688999999999999999999974 28999999999999999999999999998754322
Q ss_pred eeecccccccccCccccccCc------CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQ------LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~------~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
......++..|+|||.+.+.. ++.++|||||||++|||++|+.||...... ........ ...+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~-~~~~~~---- 227 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA----NIFAQLSA-IVDGDP---- 227 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh----hHHHHHHH-HhhcCC----
Confidence 122335788999999986543 478999999999999999999999654311 11111111 111111
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+ ..+......+.+++.+|++.+|++||++.+++++
T Consensus 228 -~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 228 -P----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -C----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1 1112234457889999999999999999999985
No 266
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.2e-34 Score=300.85 Aligned_cols=245 Identities=27% Similarity=0.408 Sum_probs=196.6
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-----cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-----QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
..+.||+|+||.||+|... +++.|++|.+..... ...+.+.+|++++++++|+||+++++++......++|+||
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEe
Confidence 4578999999999999887 789999999865431 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 84 VPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 999999999853 34578889999999999999999998 99999999999999999999999999987654332
Q ss_pred cceeecccccccccCccccccCc-CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......|+..|+|||.+.... ++.++|+|||||++|+|++|+.||..... ...+.. .........
T Consensus 157 --~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~---~~~~~~----~~~~~~~~~----- 222 (258)
T cd06632 157 --FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG---VAAVFK----IGRSKELPP----- 222 (258)
T ss_pred --cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH---HHHHHH----HHhcccCCC-----
Confidence 223445889999999988766 89999999999999999999999965431 111111 111111111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+......+.+++.+|++.+|++||++.+++++
T Consensus 223 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 223 ----IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ----cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 111123457789999999999999999999864
No 267
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.3e-33 Score=307.56 Aligned_cols=245 Identities=23% Similarity=0.366 Sum_probs=197.0
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
...||+|+||.||+|... +++.||+|++..........+.+|+.+++.++||||+++++++..++..++|+||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 347999999999999875 6899999998765445556788999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....... .....
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~ 176 (297)
T cd06659 106 TDIVS-----QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKS 176 (297)
T ss_pred HHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccc
Confidence 98773 24578899999999999999999998 99999999999999999999999999987543322 12233
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..|+..|+|||++.+..++.++|||||||+++||++|+.||...... ..... +...... .... ..
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~----~~~~~~~-----~~~~--~~ 241 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV----QAMKR----LRDSPPP-----KLKN--AH 241 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----HhccCCC-----Cccc--cC
Confidence 45899999999999888999999999999999999999999644311 11111 1111100 0000 01
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.+++.+|++.+|++||++.+|+++
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 112357789999999999999999999986
No 268
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.7e-33 Score=313.02 Aligned_cols=259 Identities=23% Similarity=0.294 Sum_probs=191.1
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~ 597 (854)
.|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07878 16 RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEV 95 (343)
T ss_pred hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcE
Confidence 4556789999999999999865 67899999986432 22345577899999999999999999987543 356
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
+++++++ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 96 ~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 96 YLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred EEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccce
Confidence 8999987 778888773 34588899999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH-------h
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL-------H 749 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~-------~ 749 (854)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+...... .
T Consensus 167 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 167 QADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 54332 223458999999999876 56889999999999999999999999754321111111110000 0
Q ss_pred hhcC-------CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 IESG-------DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~-------~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+... .+...-...+... .......+.+++.+|++.||++|||+.|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKI-FRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred cchhhHHHHhhccccccchhHHHh-ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000000000000 00011246799999999999999999999986
No 269
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.6e-33 Score=298.56 Aligned_cols=252 Identities=27% Similarity=0.375 Sum_probs=196.0
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc----------chhchHHHHHHhhhcCCCceeeEeeeeeecCeE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ----------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~----------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 597 (854)
...+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|+.++++++|||++++++++...+..
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (272)
T cd06629 4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYL 83 (272)
T ss_pred eecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCce
Confidence 34678999999999999765 6889999987532111 123577899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 84 SIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred EEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 9999999999999998543 4688888999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCcc-eeecccccccccCccccccCc--CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 678 FAVDGASH-VSSIVRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 678 ~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
........ ......|+..|+|||.+.... ++.++||||||+++||+++|..||..... .... ..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~-~~~~~-~~ 228 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA------IAAM-FKLGN-KR 228 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch------HHHH-HHhhc-cc
Confidence 54332111 123345889999999987654 78999999999999999999999964331 1111 11111 11
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....++..... .....+.+++..|++.+|++||++.+|+++
T Consensus 229 ~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 SAPPIPPDVSM----NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCcCCccccc----cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11111111111 223568889999999999999999999875
No 270
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-33 Score=299.43 Aligned_cols=249 Identities=25% Similarity=0.385 Sum_probs=199.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||.+|++... +++.||+|.+.... .....++.+|+.++++++||||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 345678999999999999875 68899999986432 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
.+++|.+++... ....+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 82 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 82 EGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999988532 233578888999999999999999998 999999999999999999999999999975543221
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......|++.|+|||+..+..++.++|||||||+++||++|+.||...... ..+.... .+...
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-------~~~~~~~-~~~~~-------- 219 (256)
T cd08218 157 -LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-------NLVLKII-RGSYP-------- 219 (256)
T ss_pred -hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-------HHHHHHh-cCCCC--------
Confidence 122345889999999999889999999999999999999999998654311 1111111 11111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+.+++.+|++.+|++||+|.||+++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 220 -PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0111223458899999999999999999999975
No 271
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.5e-33 Score=303.98 Aligned_cols=252 Identities=27% Similarity=0.384 Sum_probs=196.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeec-----CeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE-----GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-----~~~~lV 600 (854)
+.+.+.||+|+||.||++... +++.+|+|++.... .....+.+|+.+++++ +|||++++++++... +..++|
T Consensus 24 y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence 345678999999999999875 68899999986432 2245677899999998 899999999998653 358999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
+||+++++|.+++.........+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 179 (291)
T ss_pred EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence 999999999998865444456789999999999999999999998 99999999999999999999999999987544
Q ss_pred CCCcceeecccccccccCccccccC-----cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQ-----QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
.... ......|+..|+|||.+... .++.++|||||||++|||++|+.||...... ..+..+ ..+..
T Consensus 180 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~---~~~~~~-----~~~~~ 250 (291)
T cd06639 180 STRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV---KTLFKI-----PRNPP 250 (291)
T ss_pred cccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH---HHHHHH-----hcCCC
Confidence 3221 12234588999999998643 3688999999999999999999999754311 111111 11111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.+ ..+....+.+++.+|++.+|++||++.|+++|
T Consensus 251 ~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 251 PTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11111 11223458899999999999999999999875
No 272
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.8e-33 Score=299.77 Aligned_cols=251 Identities=26% Similarity=0.410 Sum_probs=198.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||.||+|... +++.||+|+++..... ..+.+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 345688999999999999875 6889999998765432 4567899999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++.. ...+++..+..++.++++||+|||+. +++|+||+|+||++++++.+||+|||++........
T Consensus 82 ~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 82 SGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999998853 34578888999999999999999998 999999999999999999999999999876544332
Q ss_pred ceee---cccccccccCccccccCc---CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 685 HVSS---IVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 685 ~~~~---~~~gt~~Y~aPE~~~~~~---~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.... ...++..|+|||++.+.. .+.++||||||+++||+++|+.||...... ...... ...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~---~~~~~~----~~~~~---- 223 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE---FQIMFH----VGAGH---- 223 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch---HHHHHH----HhcCC----
Confidence 2221 345789999999998766 889999999999999999999999654210 011111 11110
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.+... ......+.+++.+|++.+|.+||++.|++.+
T Consensus 224 -~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 224 -KPPIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred -CCCCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 1111111 1123456789999999999999999998764
No 273
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-33 Score=302.47 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=196.7
Q ss_pred hhccccccCcEEEEEEEEC----CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecC------eE
Q 003046 530 LEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RS 597 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------~~ 597 (854)
+.+.||+|+||.||+|.+. .++.||||++.... ....+++.+|++++++++||||+++++++.... ..
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence 4678999999999999864 36889999987542 233456889999999999999999999886532 24
Q ss_pred EEEEEecCCCCHHHhhcccc--cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 598 VLVYEFMHNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
++++||+.+|+|.+++.... .....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcccc
Confidence 78899999999998875322 1223578888999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcC
Q 003046 676 SKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 676 a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
++........ ......++..|++||.+....++.++|||||||++|||++ |+.||..... ..+..+.. ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~----~~~~~~~~---~~~ 232 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN----SEIYNYLI---KGN 232 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH----HHHHHHHH---cCC
Confidence 9865432211 1122345678999999998889999999999999999999 8888865431 12222211 111
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
... .+......+.+++.+|++.+|++||++.||++.|+++
T Consensus 233 ~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 RLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 110 0111234688999999999999999999999999875
No 274
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.4e-33 Score=299.61 Aligned_cols=247 Identities=24% Similarity=0.337 Sum_probs=191.3
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--c---cchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--Y---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLV 600 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV 600 (854)
.+.+.||+|+||.||+|... +++.||||.+.... . .....+.+|++++++++||||+++++++.+. ...++|
T Consensus 5 ~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v 84 (265)
T cd06652 5 RLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIF 84 (265)
T ss_pred eEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEE
Confidence 34678999999999999876 58899999886332 1 1234678899999999999999999988663 467899
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++++|.+++.. ...+++.....++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 85 MEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 999999999998843 23477888889999999999999998 99999999999999999999999999987543
Q ss_pred CCCc--ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 681 DGAS--HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 681 ~~~~--~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||..... .... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~-~~~~~~~----- 225 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA------MAAI-FKIATQP----- 225 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch------HHHH-HHHhcCC-----
Confidence 2111 112234588999999999888899999999999999999999999965431 1111 1111000
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ....+......+.+++.+|+. +|++||+++||+++
T Consensus 226 ~----~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 226 T----NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred C----CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0 111223334567788888884 89999999999875
No 275
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.8e-33 Score=303.45 Aligned_cols=263 Identities=21% Similarity=0.256 Sum_probs=196.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc-----chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+.||+|+||.||+|... +++.||||.+...... ....+..|++++++++|+||+++++++...+..++|||
T Consensus 3 ~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 82 (298)
T cd07841 3 EKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFE 82 (298)
T ss_pred eeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEc
Confidence 34578999999999999876 6899999999755322 23456789999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+ +|+|.+++... ...+++..+..++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 83 FM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred cc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 99 89999998532 13688999999999999999999998 9999999999999999999999999999765443
Q ss_pred CcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh-----cCCcc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE-----SGDIQ 756 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~-----~~~~~ 756 (854)
... .....++..|+|||.+.+ ..++.++|||||||+++||++|..+|......+....+......... .....
T Consensus 156 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 156 NRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred Ccc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 221 122346788999998865 46788999999999999999998887654321111111111000000 00000
Q ss_pred cccCCcccCcCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...........+ ......+.+++.+|++.+|++||++.||+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 111000001111 1223568899999999999999999999985
No 276
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.5e-33 Score=304.35 Aligned_cols=263 Identities=20% Similarity=0.257 Sum_probs=192.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+|++++++++||||+++++++.+.+..++|+||++
T Consensus 3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (284)
T cd07839 3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD 82 (284)
T ss_pred eeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC
Confidence 34578999999999999886 688999999865422 223567889999999999999999999999999999999997
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++... ...+++..+..++.||++||.|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 83 -~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~- 154 (284)
T cd07839 83 -QDLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR- 154 (284)
T ss_pred -CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-
Confidence 5787776432 34588999999999999999999998 999999999999999999999999999875433221
Q ss_pred eeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCccccccc-ccccccchH---------HHHHHhh-hcC
Q 003046 686 VSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEK-FGANCRNIV---------QWAKLHI-ESG 753 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~-~~~~~~~l~---------~~~~~~~-~~~ 753 (854)
......++..|+|||.+.+. .++.++|||||||++|||++|..|+.... ..+....+. .|..... ...
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 12233578999999998764 46889999999999999999998864322 111110110 0100000 000
Q ss_pred CcccccCCccc-CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLL-DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........... ..........+.+++.+|++.+|.+|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 00000000000 00011123467899999999999999999999875
No 277
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-32 Score=298.37 Aligned_cols=257 Identities=25% Similarity=0.330 Sum_probs=200.4
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV~e~~~ 605 (854)
..++||.|++|.||++... +++.+|+|.+..... .....+.+|++++++++||||++++++|... +..++||||++
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 84 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCE 84 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecC
Confidence 3578999999999999985 578999999875432 3456788999999999999999999998653 46899999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.........+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~- 160 (287)
T cd06621 85 GGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA- 160 (287)
T ss_pred CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccccc-
Confidence 9999998765444456688889999999999999999998 999999999999999999999999999865432211
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc-ccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG-ANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~-~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
....++..|+|||.+.+..++.++|||||||++|||++|+.||...... .....+..+.... .... +.....
T Consensus 161 --~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~ 233 (287)
T cd06621 161 --GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM----PNPE-LKDEPG 233 (287)
T ss_pred --ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC----Cchh-hccCCC
Confidence 2335788999999999999999999999999999999999999765321 1111223332211 1101 110100
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .......+.+++.+|++.+|++||||.||+++
T Consensus 234 ~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 234 N--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred C--CCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0 01234568899999999999999999999985
No 278
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.2e-33 Score=300.76 Aligned_cols=253 Identities=26% Similarity=0.399 Sum_probs=197.9
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecC------eEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG------RSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~------~~~ 598 (854)
.+.+.+.||+|+||.||+|..+ +++.+++|++..... ....+.+|+.+++++ +|+||+++++++.... ..+
T Consensus 7 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred heeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 4556789999999999999986 578899999875543 346788999999999 7999999999997644 489
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++..
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 99999999999998865433356788999999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCcceeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
...... ......|+..|+|||++.. ..++.++|||||||+++||++|+.||...... ..+.. +..+
T Consensus 163 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~-----~~~~ 233 (275)
T cd06608 163 LDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---RALFK-----IPRN 233 (275)
T ss_pred cccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---HHHHH-----hhcc
Confidence 433222 2233458999999998754 34678899999999999999999999643211 11111 1111
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... .+. ........+.+++.+|+..||++|||+.||+++
T Consensus 234 ~~~-----~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 234 PPP-----TLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred CCC-----CCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111 111 111234468899999999999999999999874
No 279
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.6e-33 Score=297.08 Aligned_cols=255 Identities=25% Similarity=0.373 Sum_probs=201.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||.|+||+||+|... ++..+|+|++.... ......+.+|+++++.++|+|++++++.+..++..++|+|+++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 82 (267)
T cd06610 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLS 82 (267)
T ss_pred ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccC
Confidence 345688999999999999865 67899999986543 2345678999999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++..... ...+++.....++.|++.||+|||+. +++||||||+||++++++.++|+|||++.........
T Consensus 83 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 83 GGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred CCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 9999999864321 24688999999999999999999998 9999999999999999999999999998755443222
Q ss_pred ---eeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 686 ---VSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ---~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......|+..|+|||++... .++.++|||||||++|||++|+.||....... .+..... .. .+
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~~~~~~~----~~------~~ 225 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK---VLMLTLQ----ND------PP 225 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh---hHHHHhc----CC------CC
Confidence 22334589999999998876 78899999999999999999999997544211 1111111 10 01
Q ss_pred cccCcC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.... .......+.+++.+|++.+|++||++.||++|
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111110 11223567899999999999999999999875
No 280
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.8e-33 Score=303.45 Aligned_cols=251 Identities=26% Similarity=0.386 Sum_probs=192.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHH-hhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~-l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|+.+ +|+.||+|+++... ......+..|+.+ ++..+||||+++++++..++..++||||++
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~ 83 (283)
T cd06617 4 EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD 83 (283)
T ss_pred eEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc
Confidence 34678999999999999886 68999999987542 2233455556665 566789999999999999999999999996
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
|+|.+++.........+++..+..++.|++.||+|||+++ +++||||||+||+++.++.+||+|||+++......
T Consensus 84 -~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (283)
T cd06617 84 -TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-- 158 (283)
T ss_pred -ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccccc--
Confidence 6888888654444567899999999999999999999852 79999999999999999999999999987653321
Q ss_pred eeecccccccccCcccccc----CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 686 VSSIVRGTVGYLDPEYYIS----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......|+..|+|||.+.+ ..++.++|+|||||++|||++|+.||..... ....+.. ..... . +
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~----~~~~~-~-----~ 226 (283)
T cd06617 159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQLKQ----VVEEP-S-----P 226 (283)
T ss_pred ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHHHH----HHhcC-C-----C
Confidence 1223458899999998865 4568899999999999999999999964321 1111111 11111 0 1
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.. ......+.+++.+|+..+|++||++.+|+++
T Consensus 227 ~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 227 QLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 0122457899999999999999999999875
No 281
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.9e-33 Score=297.59 Aligned_cols=251 Identities=28% Similarity=0.405 Sum_probs=200.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.||+|+||.||++..+ +++.||+|++.... .....++.+|++++++++||||+++++.+...+..++++||+++
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDG 83 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCC
Confidence 45678999999999999887 68899999987653 23456788999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++... ...+++.....++.|++.||+|||+ . +++|+||||+||+++.++.++|+|||.+.........
T Consensus 84 ~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 84 GSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred CcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 9999998542 1567888889999999999999999 7 9999999999999999999999999998755332211
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
...++..|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.......... +.+..
T Consensus 158 ---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~ 226 (265)
T cd06605 158 ---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP--PDGIFELLQYIVNEPP------PRLPS 226 (265)
T ss_pred ---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc--cccHHHHHHHHhcCCC------CCCCh
Confidence 156889999999999999999999999999999999999999654311 1122222222211110 11111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .....+.+++..|+..+|++||++.|++++
T Consensus 227 ~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 227 G---KFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred h---hcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1 133458899999999999999999999865
No 282
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=310.53 Aligned_cols=240 Identities=28% Similarity=0.449 Sum_probs=195.3
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||.|+||.||.|+.. +.+.||||++.-...+ .-.++.+|+.+|++++|||++.+-|+|..+...+||||||- |
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-G 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-G 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-c
Confidence 56999999999999865 6788999998754332 34578899999999999999999999999999999999996 4
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+-.|.+. ...+.+.+..+..|+.+.++||+|||+. +.||||||+.|||+++.|.|||+|||.|....+.
T Consensus 111 SAsDlle---VhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA----- 179 (948)
T KOG0577|consen 111 SASDLLE---VHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA----- 179 (948)
T ss_pred cHHHHHH---HHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-----
Confidence 7777764 2356688889999999999999999998 9999999999999999999999999998765433
Q ss_pred ecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 688 SIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
..+.|||.|||||++. .+.|+-++||||+|+...||.-.++|+-.++. + -+..++...+ .|.|.
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA------M--SALYHIAQNe-----sPtLq 246 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------M--SALYHIAQNE-----SPTLQ 246 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH------H--HHHHHHHhcC-----CCCCC
Confidence 3457999999999986 47899999999999999999999999866551 1 1111111111 11121
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+-...+..++..|++.-|.+|||.++++.|
T Consensus 247 ---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 23445578899999999999999999998765
No 283
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=5e-33 Score=301.84 Aligned_cols=265 Identities=21% Similarity=0.223 Sum_probs=196.6
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|..+ +++.+|+|.++..... ....+.+|+.++++++||||+++++++... +..++|+
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence 3556789999999999999987 5889999998754322 223567899999999999999999999877 8899999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||++ ++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 86 EYVE-HDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred hhcC-cCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 9997 4898887532 23688999999999999999999998 999999999999999999999999999876544
Q ss_pred CCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH-------Hhh---
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-------LHI--- 750 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~-------~~~--- 750 (854)
.... .....+++.|+|||.+.+. .++.++|+||||+++|||++|+.||...........+..... ...
T Consensus 159 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 159 PLKP-YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred Cccc-cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 3211 1233478899999998764 468899999999999999999999975442211111111100 000
Q ss_pred ---hcCCcccccCCcccCcCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ---ESGDIQGIIDPSLLDEYDIQ-SMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ---~~~~~~~~id~~l~~~~~~~-~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
............+...+... ....+.+++.+|++.+|++||++.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000111111111111 24457899999999999999999999875
No 284
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.1e-33 Score=297.96 Aligned_cols=250 Identities=23% Similarity=0.385 Sum_probs=197.0
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc------cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
..+.||+|+||.||+|... +++.||+|++..... .....+..|++++++++|+||+++++++...+..++|+|
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e 83 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83 (268)
T ss_pred ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence 4578999999999999864 689999999864321 123568899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-cEEEEEecccccccC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVD 681 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~ 681 (854)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++ .+||+|||.+.....
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 84 WMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred ccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 9999999998853 34678889999999999999999998 999999999999998776 599999999876543
Q ss_pred CCcc---eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 682 GASH---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 682 ~~~~---~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.... ......|+..|+|||.+.+..++.++||||+||++++|++|..||....... .............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~---- 228 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN----HLALIFKIASATT---- 228 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc----hHHHHHHHhccCC----
Confidence 2111 1223458899999999988889999999999999999999999996543211 1111111111000
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+......+.+++.+|++.+|++||++.|++++
T Consensus 229 -----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 229 -----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 111222334568889999999999999999999864
No 285
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.6e-33 Score=302.48 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=199.6
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.+.||+|+||.||+|... +++.||+|.+..........+.+|+.++++++|||++++++.+...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~ 99 (293)
T cd06647 20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLA 99 (293)
T ss_pred hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCC
Confidence 4455688999999999999865 678999999865544445678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 100 GGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred CCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-
Confidence 9999998843 3467888999999999999999998 999999999999999999999999999875543322
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......|++.|+|||.+....++.++|||||||++||+++|+.||...+.... +... ...+. +. .
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~---~~~~----~~~~~------~~--~ 235 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLI----ATNGT------PE--L 235 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh---eeeh----hcCCC------CC--C
Confidence 22234588999999999888899999999999999999999999975442111 0000 00000 00 0
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.........+.+++.+|++.+|++||++.+++.|
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111223457889999999999999999999987
No 286
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.3e-33 Score=298.30 Aligned_cols=247 Identities=25% Similarity=0.386 Sum_probs=196.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcC---CCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~~~lV~e 602 (854)
|.+.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|++++++++ |||++++++++......++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 345678999999999999875 68999999986542 233456888999999997 9999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ..+++...+.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 83 YAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred cCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 9999999998843 2688999999999999999999998 9999999999999999999999999999765443
Q ss_pred CcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
... .....|+..|+|||.+.++ .++.++|||||||++|+|++|+.||...... .+.. ..... ..+
T Consensus 155 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-------~~~~-~~~~~-----~~~ 220 (277)
T cd06917 155 SSK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-------RAMM-LIPKS-----KPP 220 (277)
T ss_pred ccc-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-------hhhh-ccccC-----CCC
Confidence 322 2334588999999998754 4688999999999999999999999754311 1110 01111 111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+... .....+.+++.+|++.+|++||++.|++++
T Consensus 221 ~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 221 RLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 11111 123467899999999999999999999874
No 287
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.9e-33 Score=307.19 Aligned_cols=250 Identities=23% Similarity=0.265 Sum_probs=196.9
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|... +++.||+|.+...... ..+.+..|+++++.++|+||+++++.+......++||||+
T Consensus 4 ~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 83 (316)
T cd05574 4 KKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYC 83 (316)
T ss_pred EEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEec
Confidence 34578999999999999876 4899999998765332 3456888999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
.+++|.+++... ....+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 84 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 84 PGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred CCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 999999988532 235688899999999999999999998 999999999999999999999999999864432111
Q ss_pred c----------------------------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc
Q 003046 685 H----------------------------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG 736 (854)
Q Consensus 685 ~----------------------------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~ 736 (854)
. ......||..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 0 111235788999999999988999999999999999999999999755421
Q ss_pred ccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCC----HHHHHHH
Q 003046 737 ANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS----ISEVLKD 799 (854)
Q Consensus 737 ~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs----m~eV~~~ 799 (854)
... .. .. ... ..-.........+.+++.+|++.+|++||+ +.|++++
T Consensus 239 ~~~------~~-~~-~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 239 ETF------SN-IL-KKE--------VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HHH------HH-Hh-cCC--------ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 111 00 00 010 000001113456889999999999999999 6666554
No 288
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.5e-33 Score=295.39 Aligned_cols=247 Identities=27% Similarity=0.399 Sum_probs=197.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||++... +++.+|||++.... ......+.+|++++++++|||++++++.+..++..++||||++
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd08220 3 EKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAP 82 (256)
T ss_pred eEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCC
Confidence 45678999999999999875 68899999986542 2335678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEecccccccCCCc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~~~~~~ 684 (854)
+++|.+++... ....+++..+..++.+++.||+|||++ +++|+||||+||+++.+ +.+||+|||++.......
T Consensus 83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 83 GGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999542 234578889999999999999999998 99999999999999865 468999999997654322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ...... .. +....+
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~----~~~~~~---~~-~~~~~~------ 221 (256)
T cd08220 157 -KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP----ALVLKI---MS-GTFAPI------ 221 (256)
T ss_pred -cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH----HHHHHH---Hh-cCCCCC------
Confidence 122345889999999999888999999999999999999999999754421 111111 11 111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......+.+++.+|++.+|++|||+.|++++
T Consensus 222 ---~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 222 ---SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ---CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11123457899999999999999999999875
No 289
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.7e-33 Score=303.97 Aligned_cols=262 Identities=21% Similarity=0.271 Sum_probs=194.3
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
..+.||+|++|.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||+.
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~- 82 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 82 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-
Confidence 4578999999999999876 68899999886443 2233568899999999999999999999999999999999996
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++........
T Consensus 83 ~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~- 156 (284)
T cd07860 83 QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT- 156 (284)
T ss_pred cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc-
Confidence 6888887542 245688999999999999999999998 9999999999999999999999999998755332211
Q ss_pred eecccccccccCccccccCc-CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh------------cC
Q 003046 687 SSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE------------SG 753 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~------------~~ 753 (854)
.....++..|+|||++.+.. ++.++|||||||++|||+||+.||...........+.++...... ..
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP 236 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence 12234688999999887644 688999999999999999999999654321111111111100000 00
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.........+.. ........+.+++.+|++.||++||+++|++++
T Consensus 237 ~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 237 SFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000000 000112356789999999999999999999865
No 290
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.8e-33 Score=313.60 Aligned_cols=262 Identities=22% Similarity=0.255 Sum_probs=200.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-C-----CceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-H-----RNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H-----pnIv~l~g~~~~~~~~~l 599 (854)
+|.+.+.||+|.||.|-+|... +++.||||+++... .-.++...|+.+|..++ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 6677899999999999999765 69999999998543 33456678999999996 4 499999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC--CcEEEEEecccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH--MRAKVSDFGLSK 677 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~--~~~kL~DFGla~ 677 (854)
|+|.++ .+|.++|... +...++...+..|+.||+.||.+||+. +|||+||||+||||.+- ..+||+|||.|+
T Consensus 266 VfELL~-~NLYellK~n--~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNN--KFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eehhhh-hhHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccc
Confidence 999885 5999999754 345588889999999999999999998 99999999999999754 479999999998
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH-------HHHH--
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ-------WAKL-- 748 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~-------~~~~-- 748 (854)
....... ....+..|+|||++.+.+|+.+.||||||||++||++|.+.|.+.+..+-...+++ |...
T Consensus 340 ~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 340 FESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred ccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 6543322 33468899999999999999999999999999999999988876552111111111 0000
Q ss_pred -----hhhc-CCcc------c----------------ccCCccc--------CcCCHHHHHHHHHHHHHccCCCCCCCCC
Q 003046 749 -----HIES-GDIQ------G----------------IIDPSLL--------DEYDIQSMWKIEEKALMCVLPHGHMRPS 792 (854)
Q Consensus 749 -----~~~~-~~~~------~----------------~id~~l~--------~~~~~~~~~~l~~l~~~Cl~~~P~~RPs 792 (854)
.+.. .... + ..+.... ..........+.+++.+|+.+||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 0000 0000 0 0010000 0111234567899999999999999999
Q ss_pred HHHHHHH
Q 003046 793 ISEVLKD 799 (854)
Q Consensus 793 m~eV~~~ 799 (854)
..|.++|
T Consensus 496 p~qal~H 502 (586)
T KOG0667|consen 496 PAQALNH 502 (586)
T ss_pred HHHHhcC
Confidence 9999987
No 291
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.1e-33 Score=299.35 Aligned_cols=250 Identities=25% Similarity=0.391 Sum_probs=192.7
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeee------cCeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE------EGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~------~~~~~ 598 (854)
.+.+.+.||+|+||.||+|... +++.+|+|++.... ....++..|+.+++++ +|+||+++++++.. ....+
T Consensus 17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 4456689999999999999875 57899999986543 2345678899999998 79999999999853 45789
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
++|||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||++..
T Consensus 96 iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNT--KGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEeCCCCcHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 999999999999988543 234577888889999999999999998 999999999999999999999999999875
Q ss_pred ccCCCcceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
...... ......|+..|+|||.+. ...++.++|||||||++|||++|+.||........ +.. ....
T Consensus 171 ~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~---~~~-----~~~~ 241 (282)
T cd06636 171 LDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA---LFL-----IPRN 241 (282)
T ss_pred hhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh---hhh-----HhhC
Confidence 432211 123345899999999986 34678899999999999999999999965431110 100 0000
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .+.+. .......+.+++.+|++.+|.+||++.|++++
T Consensus 242 ~-----~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 242 P-----PPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred C-----CCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0 01111 01123468899999999999999999999764
No 292
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.1e-33 Score=302.15 Aligned_cols=261 Identities=21% Similarity=0.302 Sum_probs=192.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|++|.||+|..+ +++.||||.+..... .....+.+|++++++++|+||+++++++...+..++||||+.
T Consensus 7 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (291)
T cd07844 7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD 86 (291)
T ss_pred eeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC
Confidence 345678999999999999876 688999999875432 223456789999999999999999999999999999999998
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+ +|.+++... ...+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 87 ~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~ 158 (291)
T cd07844 87 T-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-K 158 (291)
T ss_pred C-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC-c
Confidence 5 898887532 23678889999999999999999998 99999999999999999999999999986432211 1
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc---CCccc----
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES---GDIQG---- 757 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~---~~~~~---- 757 (854)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||....... .........+.. .....
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE---DQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHhcCCCChhhhhhhhhc
Confidence 1122346889999999875 457899999999999999999999996543110 000000000000 00000
Q ss_pred ----------ccCCcccCcC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 ----------IIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ----------~id~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.... .......+.+++.+|++.+|++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000000 01112467799999999999999999998864
No 293
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.3e-33 Score=298.82 Aligned_cols=245 Identities=25% Similarity=0.356 Sum_probs=197.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
.+.||+|++|.||+|... +++.+|+|++........+.+.+|+.+++.++||||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 468999999999999865 6889999998755444456688999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++.. .++++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++........ ....
T Consensus 104 ~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~ 174 (285)
T cd06648 104 TDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRKS 174 (285)
T ss_pred HHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-cccc
Confidence 998853 4578889999999999999999998 999999999999999999999999998865433221 2233
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..|+..|+|||.+.+..++.++|||||||++|||++|+.||..... ....... ..+.. +.+.. ..
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-------~~~~~~~-~~~~~-----~~~~~--~~ 239 (285)
T cd06648 175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-------LQAMKRI-RDNLP-----PKLKN--LH 239 (285)
T ss_pred ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-------HHHHHHH-HhcCC-----CCCcc--cc
Confidence 4589999999999888899999999999999999999999865431 1111111 11111 01110 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.+++.+|++.+|++||++.+++++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 122468899999999999999999999874
No 294
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=8.1e-33 Score=302.25 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=195.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||++... .++.||+|.+..... .....+.+|+++++.++||||+++++.+..++..++||||+
T Consensus 4 ~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 83 (305)
T cd05609 4 ETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYV 83 (305)
T ss_pred eEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecC
Confidence 34578999999999999876 578999999875432 23456778999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC-
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA- 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~- 683 (854)
++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 84 ~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 84 EGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 99999999843 34578888999999999999999998 99999999999999999999999999986321110
Q ss_pred -------------cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 684 -------------SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 684 -------------~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
........|+..|+|||++....++.++|+|||||++|||++|..||.+.... .+.. ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~----~~~~---~~~ 229 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE----ELFG---QVI 229 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH---HHH
Confidence 00111235788999999998888999999999999999999999999754311 1111 111
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
. +.. ..+.... .....+.+++.+|++.+|++||++.++.+.|+.
T Consensus 230 ~-~~~---~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 S-DDI---EWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred h-ccc---CCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1 110 0111111 122347899999999999999997666665555
No 295
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.7e-33 Score=301.94 Aligned_cols=245 Identities=27% Similarity=0.402 Sum_probs=193.7
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+.+.||+|+||.||+|+.. +++.||+|++..... ....++.+|+++++.++||||++++++|...+..++|+|
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 3556788999999999999876 688999999864322 223568899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+. |++.+.+.. ....+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 96 ~~~-g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 96 YCL-GSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred hhC-CCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 997 577766632 234588999999999999999999998 9999999999999999999999999998754322
Q ss_pred CcceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
....++..|+|||++. ...++.++||||||+++|||++|+.||....... .. .. ......
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~----~~---~~-~~~~~~---- 231 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----AL---YH-IAQNDS---- 231 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH----HH---HH-HhcCCC----
Confidence 2235788999999884 4568889999999999999999999986543111 00 10 111110
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.+ ........+.+++.+|++.+|++||+|.+|+++
T Consensus 232 -~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 232 -PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 011 011233468899999999999999999999986
No 296
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.9e-33 Score=300.90 Aligned_cols=262 Identities=23% Similarity=0.276 Sum_probs=194.5
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.||.|++|.||+|... +|+.||+|++..... .....+.+|++++++++|||++++++++..++..+++|||++
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~- 81 (283)
T cd07835 3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD- 81 (283)
T ss_pred hheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-
Confidence 4578999999999999876 689999999875432 223567889999999999999999999999999999999995
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++........
T Consensus 82 ~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~- 155 (283)
T cd07835 82 LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT- 155 (283)
T ss_pred cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-
Confidence 68998885321 24688999999999999999999998 9999999999999999999999999998754322211
Q ss_pred eecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC--------C---
Q 003046 687 SSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG--------D--- 754 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~--------~--- 754 (854)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||...........+.++........ .
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 1222468899999988764 578899999999999999999999975432111111111100000000 0
Q ss_pred -cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 -IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 -~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+.. ..........+.+++.+|++.+|++||+++|++++
T Consensus 236 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 236 TFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000 00011122467899999999999999999999864
No 297
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.9e-33 Score=302.39 Aligned_cols=243 Identities=26% Similarity=0.363 Sum_probs=197.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||++... +++.||+|++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEY 82 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEec
Confidence 345688999999999999876 58999999987542 22345688899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||+++.....
T Consensus 83 ~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 83 VPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999843 35688899999999999999999998 9999999999999999999999999998765433
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.....|++.|+|||.+.+...+.++||||||+++|+|++|+.||...... .... ....+.. .+
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~~~~~~~------~~ 217 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI----QIYE----KILEGKV------RF 217 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----HHhcCCc------cC
Confidence 23345899999999998888899999999999999999999999654411 1111 1111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
... ....+.+++.+|+..+|.+|| +++|++++
T Consensus 218 ~~~----~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 218 PSF----FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred Ccc----CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 111 134577899999999999999 77777765
No 298
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.8e-34 Score=314.32 Aligned_cols=246 Identities=29% Similarity=0.450 Sum_probs=192.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEE---EEEec-CCccchhchHHHHHHhhhcCCCceeeEeeeeeecCe--EEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAV---KVLTS-NSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR--SVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAv---K~l~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~--~~lV~ 601 (854)
.+..+||+|+|-+||||.+. +|.+||= |.-.. .+......|..|+.+|+.|+||||++++.++.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 35678999999999999875 5777753 22111 123334678999999999999999999999876554 78999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEeccccccc
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAV 680 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~~ 680 (854)
|.|..|+|..|+. +.++++......++.||++||.|||++ .|+|||||||.+||+|+.+ |.|||+|.|||....
T Consensus 123 EL~TSGtLr~Y~k----k~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 123 ELFTSGTLREYRK----KHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred ecccCCcHHHHHH----HhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 9999999999994 456677888999999999999999996 6799999999999999865 899999999998664
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.. +. ..+.|||.|||||++. ..|.+.+||||||+.|+||+|+..||.... +-.+.-+ ++..|.-...+.
T Consensus 198 ~s--~a-ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~------n~AQIYK-KV~SGiKP~sl~ 266 (632)
T KOG0584|consen 198 KS--HA-KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT------NPAQIYK-KVTSGIKPAALS 266 (632)
T ss_pred cc--cc-ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC------CHHHHHH-HHHcCCCHHHhh
Confidence 32 22 2377999999999987 789999999999999999999999997654 3223222 222222111111
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... -.++.++|.+|+.. .++|||+.|++++
T Consensus 267 -----kV~---dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 267 -----KVK---DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred -----ccC---CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 111 12477899999999 8999999999875
No 299
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.4e-33 Score=305.38 Aligned_cols=267 Identities=21% Similarity=0.262 Sum_probs=195.1
Q ss_pred HhhccccccCcEEEEEEEECC---CcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLKD---GKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLV 600 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~---~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV 600 (854)
.+.++||+|+||.||+|.... ++.||+|.+.... ......+.+|++++++++||||+++++++... ...++|
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 82 (316)
T cd07842 3 EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLL 82 (316)
T ss_pred eEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEE
Confidence 456789999999999998754 7899999997633 23345678899999999999999999999888 789999
Q ss_pred EEecCCCCHHHhhcccccc-cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC----CCcEEEEEecc
Q 003046 601 YEFMHNGTLKEHLYGTLTH-EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK----HMRAKVSDFGL 675 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~----~~~~kL~DFGl 675 (854)
|||+++ +|.+.+...... ...++...+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 83 FDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999975 676666433222 23688889999999999999999998 9999999999999999 99999999999
Q ss_pred cccccCCCc--ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccc------cchHHHH
Q 003046 676 SKFAVDGAS--HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANC------RNIVQWA 746 (854)
Q Consensus 676 a~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~------~~l~~~~ 746 (854)
++....... .......++..|+|||.+.+. .++.++|||||||+++||++|+.||......... ..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 986543322 122334578999999988764 5789999999999999999999999765422100 0011100
Q ss_pred HHh-----------hhcCCcccccCCcccCcCC---------H--HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 747 KLH-----------IESGDIQGIIDPSLLDEYD---------I--QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 ~~~-----------~~~~~~~~~id~~l~~~~~---------~--~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... .+........+......++ . .....+.+++.+|++.+|++|||+.|++++
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 0000000000000000011 0 223468899999999999999999999875
No 300
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.5e-33 Score=299.74 Aligned_cols=262 Identities=23% Similarity=0.288 Sum_probs=197.1
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEEEEec
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEFM 604 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV~e~~ 604 (854)
+.+.||+|+||.||+|+.. +++.+|+|++.... ......+.+|++++++++|+|++++++++... +..++|+||+
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07840 3 KIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM 82 (287)
T ss_pred eeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence 4578999999999999887 48899999998653 23345688899999999999999999999888 8899999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++ +|.+++... ...+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||++........
T Consensus 83 ~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 83 DH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 75 888887432 24688999999999999999999998 999999999999999999999999999976554432
Q ss_pred ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc-------
Q 003046 685 HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ------- 756 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~------- 756 (854)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+....... ......
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP-TDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC-chhhccccccchh
Confidence 22233456889999998765 457899999999999999999999997654221111111110000 000000
Q ss_pred -------cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 -------GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 -------~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+...+...+...+.+++.+|++.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000011111124578899999999999999999999874
No 301
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.1e-32 Score=293.48 Aligned_cols=249 Identities=29% Similarity=0.411 Sum_probs=202.8
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.||+|++|.||+|+.. +++.||||++..... .....+.+|++.+.+++|+|++++++++...+..++|+||+++
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (264)
T cd06623 4 ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDG 83 (264)
T ss_pred eeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCC
Confidence 35688999999999999887 489999999876543 3457789999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++.. ...+++..+..++.|+++||+|||+ . +++||||+|+||+++.++.++|+|||++.........
T Consensus 84 ~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 84 GSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 999999853 2568889999999999999999999 8 9999999999999999999999999998765433222
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||..... .....+..+.. .... +.+
T Consensus 157 -~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~----~~~~-----~~~-- 223 (264)
T cd06623 157 -CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-PSFFELMQAIC----DGPP-----PSL-- 223 (264)
T ss_pred -ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-cCHHHHHHHHh----cCCC-----CCC--
Confidence 1234578999999999999999999999999999999999999976542 11112222211 1111 111
Q ss_pred cCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQ-SMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~-~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.. ....+.+++..|++.+|++||++.|++++
T Consensus 224 --~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 224 --PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111 33568899999999999999999999986
No 302
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.5e-33 Score=291.05 Aligned_cols=247 Identities=30% Similarity=0.492 Sum_probs=201.2
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
..+.||+|++|.||++... +++.+++|++..........+.+|++++++++|+|++++++++......++++||+++++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 83 (253)
T cd05122 4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGS 83 (253)
T ss_pred eeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCc
Confidence 4578999999999999986 688999999976654456788999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceee
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSS 688 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 688 (854)
|.+++... ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+........ ..
T Consensus 84 L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~ 155 (253)
T cd05122 84 LKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RN 155 (253)
T ss_pred HHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc--cc
Confidence 99988542 25689999999999999999999998 999999999999999999999999999876554332 23
Q ss_pred cccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCC
Q 003046 689 IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYD 768 (854)
Q Consensus 689 ~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~ 768 (854)
...++..|+|||++.+..++.++||||||+++++|++|+.||...... ..+.. . .........+ .
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~----~-~~~~~~~~~~-------~ 220 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM---KALFK----I-ATNGPPGLRN-------P 220 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH---HHHHH----H-HhcCCCCcCc-------c
Confidence 456889999999999888999999999999999999999998754311 01111 1 0011111111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 769 IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 769 ~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+.+++.+|++.+|++||++.|++++
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 221 EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1113468899999999999999999999875
No 303
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.6e-33 Score=298.66 Aligned_cols=264 Identities=21% Similarity=0.297 Sum_probs=197.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.++||+|++|.||+|+.. +|+.||||+++..... ....+.+|++++++++||||+++++++...+..++||||+++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 82 (284)
T cd07836 3 KQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK 82 (284)
T ss_pred eEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc
Confidence 34678999999999999986 5889999998755322 345677899999999999999999999999999999999985
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
+|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||+++....... .
T Consensus 83 -~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-~ 156 (284)
T cd07836 83 -DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-T 156 (284)
T ss_pred -cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-c
Confidence 8888875432 234689999999999999999999998 999999999999999999999999999875433211 1
Q ss_pred eecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh-------hhc-CCcc-
Q 003046 687 SSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------IES-GDIQ- 756 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~-------~~~-~~~~- 756 (854)
.....++..|++||.+.+. .++.++|||||||++|||++|+.||......+....+.+..... +.. ....
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 2233478899999998664 56889999999999999999999997654322222222111000 000 0000
Q ss_pred ---cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 ---GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ---~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+... ..........+.+++.+|++.+|.+||++.||+++
T Consensus 237 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 237 TFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000 00011223467899999999999999999999864
No 304
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.2e-32 Score=300.66 Aligned_cols=247 Identities=26% Similarity=0.401 Sum_probs=194.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+...+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++|||++++++++..+...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3455678999999999999875 688999999874422 223468889999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+. |+|.+.+.. ....+++.++..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 106 ~~~-g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 106 YCL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 997 577777642 234588999999999999999999998 9999999999999999999999999998654322
Q ss_pred CcceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
....|+..|+|||++. .+.++.++|||||||++|||++|+.||....... .+..+ ...+. .
T Consensus 179 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~~~~~----~~~~~-~--- 242 (317)
T cd06635 179 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---ALYHI----AQNES-P--- 242 (317)
T ss_pred -----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH---HHHHH----HhccC-C---
Confidence 2235889999999974 4568899999999999999999999986533110 11111 11110 0
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.. ........+.+++.+|++.+|.+||++.+|++++-
T Consensus 243 --~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 243 --TL---QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred --CC---CCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 00 01122345789999999999999999999998754
No 305
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.3e-33 Score=323.50 Aligned_cols=271 Identities=20% Similarity=0.265 Sum_probs=186.9
Q ss_pred HHHHHhhccccccCcEEEEEEEECC--CcEEEEEEEe--------------c---CCccchhchHHHHHHhhhcCCCcee
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKD--GKEIAVKVLT--------------S---NSYQGKREFTNEVTLLSRIHHRNLV 585 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~--~~~vAvK~l~--------------~---~~~~~~~~~~~E~~~l~~l~HpnIv 585 (854)
...|.+.++||+|+||+||++.++. +...++|.+. + ........+.+|+++|++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 3456778899999999999987642 2222222110 0 1111234578999999999999999
Q ss_pred eEeeeeeecCeEEEEEEecCCCCHHHhhcccc-cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC
Q 003046 586 QFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTL-THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 586 ~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
++++++...+..++|++++. ++|.+++.... .............|+.|++.||+|||++ +|+||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 99999999999999999985 57777764321 1122334556778999999999999998 9999999999999999
Q ss_pred CCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH
Q 003046 665 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 744 (854)
Q Consensus 665 ~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~ 744 (854)
++.+||+|||+++..............||..|+|||++.+..++.++|||||||++|||++|..++...........+..
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 99999999999986654433334446799999999999999999999999999999999998754322211111111111
Q ss_pred HHHHhh-hcCCcc-------cccCCcccC----cCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 745 WAKLHI-ESGDIQ-------GIIDPSLLD----EYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 745 ~~~~~~-~~~~~~-------~~id~~l~~----~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...... ....+. +.++..... ... ......+.+++.+|++.||++|||+.|+++|
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 111000 000000 000000000 000 0011246678899999999999999999986
No 306
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=289.35 Aligned_cols=248 Identities=21% Similarity=0.354 Sum_probs=203.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
..+.++||+|+||.||+|.++ .|+.||||.+... .+..++.+|+.+|+++..|++|+++|.+.....+++|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 345678999999999999887 6899999998654 3456788999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+..+.++- ..+.|.+.++..++...++||+|||.. .-+|||||+.|||++.+|.+||+|||.|-.+.+. -..
T Consensus 113 GSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAK 185 (502)
T KOG0574|consen 113 GSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAK 185 (502)
T ss_pred CcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh-HHh
Confidence 999999863 467799999999999999999999997 7799999999999999999999999998654332 223
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
..++.||+.|||||++..-.|..++||||+|+...||..|++||.+-..-. .+.. +.... .|.+ .
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---AIFM-----IPT~P-----PPTF--~ 250 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---AIFM-----IPTKP-----PPTF--K 250 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---eeEe-----ccCCC-----CCCC--C
Confidence 456779999999999999999999999999999999999999997543100 0000 00000 0111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
-+..-...+-+++..|+-..|++|-|+.++++|
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 123344578899999999999999999999887
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.6e-32 Score=296.77 Aligned_cols=249 Identities=26% Similarity=0.388 Sum_probs=199.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|.++ +++.|++|++..... ....+.+|++++++++|+|++++++++...+..++|+||+++
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 99 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG 99 (286)
T ss_pred chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence 334578999999999999887 688999999975543 456788999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........ .
T Consensus 100 ~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 172 (286)
T cd06614 100 GSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-K 172 (286)
T ss_pred CcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-h
Confidence 9999999542 13789999999999999999999998 999999999999999999999999999865433221 2
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....++..|+|||++.+..++.++|||||||++|+|++|+.||....... .... .. ........+
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~---~~~~----~~-~~~~~~~~~------ 238 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR---ALFL----IT-TKGIPPLKN------ 238 (286)
T ss_pred hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH---HHHH----HH-hcCCCCCcc------
Confidence 223357889999999988889999999999999999999999986543110 1111 11 111111010
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......+.+++.+|++.+|.+||++.+|+++
T Consensus 239 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 239 -PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -hhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11123457899999999999999999999875
No 308
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.3e-33 Score=294.09 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=202.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.++||+|+||.||+++.. +++.+|+|.+.... ......+.+|++++++++|+||+++++++......++|+||++
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd08530 3 KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAP 82 (256)
T ss_pred eEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcC
Confidence 34678999999999999765 67899999987542 2334567789999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||+++.....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 83 FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 9999999865443456788999999999999999999998 9999999999999999999999999999766543
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......++..|++||.+.+..++.++|+||+|+++|||++|+.||...... .+.. ....+...
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~----~~~~----~~~~~~~~--------- 219 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ----DLRY----KVQRGKYP--------- 219 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----HHhcCCCC---------
Confidence 222345789999999999989999999999999999999999999754411 1111 11111111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.........+.+++.+|++.+|++||++.|++++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 220 PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1112334568899999999999999999999875
No 309
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.3e-32 Score=296.79 Aligned_cols=265 Identities=21% Similarity=0.211 Sum_probs=192.9
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcC-CCceeeEeeeeeecCe-----EEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGR-----SVL 599 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~-----~~l 599 (854)
.+.+.||+|+||.||+|... +++.||||+++.... .....+.+|+.++++++ ||||+++++++...+. .++
T Consensus 4 ~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~l 83 (295)
T cd07837 4 EKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYL 83 (295)
T ss_pred eEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEE
Confidence 44678999999999999876 688999998765422 22356788999999995 6999999999977665 899
Q ss_pred EEEecCCCCHHHhhcccccc-cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEecccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTH-EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSK 677 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~ 677 (854)
||||+++ +|.+++...... ...+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 84 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 84 VFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccce
Confidence 9999985 888887543222 35689999999999999999999998 9999999999999998 8999999999987
Q ss_pred cccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
....... ......+++.|+|||++.+ ..++.++|||||||++|||++|..||...........+....... ......
T Consensus 160 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 237 (295)
T cd07837 160 AFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTP-TEQVWP 237 (295)
T ss_pred ecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCC-ChhhCc
Confidence 5432211 1122346889999998865 457899999999999999999999997544221111111110000 000000
Q ss_pred cccC-------Cccc----CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIID-------PSLL----DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id-------~~l~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ +... .........++.+++.+|++.+|++||++.|++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0000 00001223568899999999999999999999865
No 310
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.2e-32 Score=296.92 Aligned_cols=242 Identities=25% Similarity=0.318 Sum_probs=185.9
Q ss_pred cccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhh---hcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 533 KIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLS---RIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~---~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.||+|+||.||++... +++.+|+|.+...... ....+.+|..+++ ..+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 5889999998654221 1223444544433 3479999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999988842 34689999999999999999999998 99999999999999999999999999987543322
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....|+..|+|||.+.. ..++.++||||+||+++||++|+.||....... ...+.. ... ..+..+.
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~---~~~-------~~~~~~~ 219 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDR---MTL-------TVNVELP 219 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC-HHHHHH---Hhh-------cCCcCCc
Confidence 123458999999999864 568899999999999999999999997543111 111111 000 0111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
......+.+++.+|++.+|++|| +++|+++|
T Consensus 220 ----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 220 ----DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ----cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 12234578899999999999999 59999887
No 311
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.6e-32 Score=296.98 Aligned_cols=253 Identities=26% Similarity=0.349 Sum_probs=193.1
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||+..
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~ 87 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI 87 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC
Confidence 4568999999999999876 58999999986543 234556888999999996 99999999999999999999999864
Q ss_pred CCHHHhhccc-ccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 607 GTLKEHLYGT-LTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 607 gsL~~~L~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++.++.... ......+++..+..++.+++.||+|||+. .+++||||||+||+++.++.+||+|||+++.......
T Consensus 88 -~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 163 (288)
T cd06616 88 -SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA- 163 (288)
T ss_pred -CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc-
Confidence 555543211 11235688999999999999999999974 2899999999999999999999999999875433221
Q ss_pred eeecccccccccCccccccC---cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 686 VSSIVRGTVGYLDPEYYISQ---QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~---~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.....|+..|+|||++.+. .++.++|||||||++|||++|+.||.... ........... +. .+.
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~-~~-----~~~ 230 (288)
T cd06616 164 -KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN------SVFDQLTQVVK-GD-----PPI 230 (288)
T ss_pred -cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc------hHHHHHhhhcC-CC-----CCc
Confidence 1223588999999999876 68899999999999999999999996543 11111111111 11 111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+...........+.+++.+|++.+|++||++.+|+++
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111112234468899999999999999999999886
No 312
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3e-32 Score=295.48 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=191.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.+++.++|+||+++.+++..++..++|+||+.
T Consensus 7 y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 86 (291)
T cd07870 7 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH 86 (291)
T ss_pred eEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc
Confidence 345678999999999999875 6889999998754322 23457789999999999999999999999999999999996
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
++|.+++... ...+.+..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||+++...... .
T Consensus 87 -~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~ 158 (291)
T cd07870 87 -TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-Q 158 (291)
T ss_pred -CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCC-C
Confidence 6777666422 23467788889999999999999998 99999999999999999999999999987543221 1
Q ss_pred eeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh-------------
Q 003046 686 VSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE------------- 751 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~------------- 751 (854)
......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...... ...+.+ ......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 159 TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEK-IWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHH-HHHHcCCCChhhhhhhhhc
Confidence 12233478999999998764 5788999999999999999999999754311 011111 000000
Q ss_pred cCCcccccCCcccCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEY-----DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.......... .......+.+++.+|++.+|++|||+.|++.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000000000000 00113467789999999999999999998864
No 313
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-32 Score=295.45 Aligned_cols=244 Identities=27% Similarity=0.365 Sum_probs=190.9
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
||+|+||+||++... +|+.+|+|++.... ......+..|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999765 68899999987542 12244567899999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++.... ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++...... .....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~ 153 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKG 153 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--Ccccc
Confidence 99986432 24688999999999999999999998 9999999999999999999999999998755432 12223
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..++..|+|||++.+..++.++|||||||++++|++|+.||...........+.. .... ... ..+.
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~------~~~----~~~~ 219 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR----RTLE------MAV----EYPD 219 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh----cccc------ccc----cCCc
Confidence 4578899999999888899999999999999999999999965442111111111 0000 000 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRP-----SISEVLK 798 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~ 798 (854)
.....+.+++.+|++.+|++|| ++.++++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 1234578999999999999999 5555654
No 314
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.1e-32 Score=302.27 Aligned_cols=260 Identities=21% Similarity=0.282 Sum_probs=192.8
Q ss_pred cccccc--CcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSG--GFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G--~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
..||+| +||+||++++. +|+.||+|++..... ...+.+.+|+.+++.++||||++++++|..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 99999999875 689999999875422 2235688899999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+|||++.++.++++|||.+..........
T Consensus 84 ~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999886532 23578888899999999999999998 99999999999999999999999998653222111100
Q ss_pred ------eecccccccccCccccccC--cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH----------
Q 003046 687 ------SSIVRGTVGYLDPEYYISQ--QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL---------- 748 (854)
Q Consensus 687 ------~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~---------- 748 (854)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||........ +......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM---LLQKLKGPPYSPLDITT 235 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH---HHHHhcCCCCCCccccc
Confidence 1112356779999999763 478999999999999999999999975431111 1110000
Q ss_pred ------h-------h---------hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 ------H-------I---------ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ------~-------~---------~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. . ..+....+.+..+...........+.+++.+|++.+|++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 0 0000001111112222223455678999999999999999999999877
No 315
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.4e-32 Score=293.14 Aligned_cols=242 Identities=23% Similarity=0.310 Sum_probs=193.9
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
||+|+||.||+|+.. +++.+|+|++..... .....+.+|++++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999986 488999999875432 2346788999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++.. ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++...... ....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 999853 34578889999999999999999998 99999999999999999999999999997654432 2233
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..|+..|++||.+....++.++|+||||+++|||++|..||..... +.......... +. ....++.
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~-~~--------~~~~~~~ 217 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-----DPMEIYNDILK-GN--------GKLEFPN 217 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-----CHHHHHHHHhc-cC--------CCCCCCc
Confidence 4588999999999888899999999999999999999999975441 11111111111 00 0111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPS-----ISEVLK 798 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~ 798 (854)
.....+.+++.+|++.+|++||+ ++|+++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 12346889999999999999999 566655
No 316
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.5e-32 Score=295.95 Aligned_cols=256 Identities=20% Similarity=0.233 Sum_probs=191.1
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcC-CCceeeEeeeeeec--CeEEEEEEec
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEE--GRSVLVYEFM 604 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~--~~~~lV~e~~ 604 (854)
+.+.||+|+||.||+|... +++.||+|+++... ........+|+.++.++. |+|++++++++.+. +..++|+||+
T Consensus 3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (282)
T cd07831 3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM 82 (282)
T ss_pred eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence 4578999999999999876 68899999987542 222234457888888885 99999999999887 8899999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+ |+|.+.+... ...+++..+..++.|++.||+|||+. +++||||||+||+++. +.+||+|||+++.......
T Consensus 83 ~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 83 D-MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred C-ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 7 5887777432 24689999999999999999999998 9999999999999999 9999999999976543222
Q ss_pred ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh-----------hc
Q 003046 685 HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI-----------ES 752 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~-----------~~ 752 (854)
. ....++..|+|||++.. ..++.++|||||||++|||++|..||...+..+ .+.+..... ..
T Consensus 155 ~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 155 Y--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD----QIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred c--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH----HHHHHHHHcCCCCHHHHHhhcc
Confidence 1 22347899999997654 557889999999999999999999997654211 111111110 00
Q ss_pred CCcccccCCcccC----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 753 GDIQGIIDPSLLD----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 753 ~~~~~~id~~l~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........+.... .........+.+++.+|++.+|++||++.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000000000 0011234678999999999999999999999875
No 317
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=306.37 Aligned_cols=251 Identities=23% Similarity=0.363 Sum_probs=201.4
Q ss_pred HHHhhccccccCcEEEEEEEECCCc-EEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDGK-EIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~~-~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+...||-|+||.||+|..++.. -.|.|++...+.....+|.-|++||..+.||+||+|++.|.-++.+++..|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 3445567899999999999887433 346788877777777889999999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
||-++..+.. -+..|.+.++..++.|++.||.|||++ .|||||||+.|||++-+|.++|+|||.+-..... ..
T Consensus 113 GGAVDaimlE---L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~q 185 (1187)
T KOG0579|consen 113 GGAVDAIMLE---LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQ 185 (1187)
T ss_pred CchHhHHHHH---hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhH-Hh
Confidence 9999887743 366788999999999999999999999 9999999999999999999999999987432211 22
Q ss_pred eeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 686 VSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
....+.|||.|||||+.. ..+|+.++||||||+.|.||..+.+|-...+ ..+.++ .+...+...++.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln---pMRVll-----KiaKSePPTLlq 257 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN---PMRVLL-----KIAKSEPPTLLQ 257 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc---hHHHHH-----HHhhcCCCcccC
Confidence 334567999999999875 4679999999999999999999999865433 111222 222222223333
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
|. .....+.+++.+|+..+|..||++.++++|
T Consensus 258 PS-------~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 258 PS-------HWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cc-------hhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 22 234568899999999999999999999876
No 318
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.3e-32 Score=291.28 Aligned_cols=250 Identities=26% Similarity=0.437 Sum_probs=203.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||++... +++.+|+|++..... .....+.+|+++++.++|||++++++.+......++|+||++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~ 82 (258)
T cd08215 3 EIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYAD 82 (258)
T ss_pred eEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecC
Confidence 34578999999999999876 588999999875533 445678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.........+++..+..++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~ 158 (258)
T cd08215 83 GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-D 158 (258)
T ss_pred CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc-c
Confidence 9999999965443456789999999999999999999998 99999999999999999999999999997654432 2
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......|++.|+|||...+..++.++||||+|+++++|++|+.||...... .+. .... ...... +..
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~---~~~~-~~~~~~-----~~~ 225 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL----ELA---LKIL-KGQYPP-----IPS 225 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH----HHH---HHHh-cCCCCC-----CCC
Confidence 233346889999999999888999999999999999999999999654411 111 1111 111111 111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.+++.+|+..+|++||++.|++++
T Consensus 226 ----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 226 ----QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ----CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 223457899999999999999999999875
No 319
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.6e-32 Score=291.28 Aligned_cols=248 Identities=28% Similarity=0.420 Sum_probs=198.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|..+ +|..+|+|.+.... ....+.+.+|++++++++|+||+++++.+...+..++|+||++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (257)
T cd08225 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCD 82 (257)
T ss_pred eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCC
Confidence 34678999999999999886 58899999986542 2334578899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-cEEEEEecccccccCCCc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~~~~ 684 (854)
+++|.+++... ....+++..+..++.|+++||+|||+. +++|+||||+||++++++ .+||+|||.+........
T Consensus 83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 83 GGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 99999988542 233578999999999999999999998 999999999999999885 469999999876543322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......|++.|+|||+..+..++.++|||||||+++||++|..||.... ..++...... +..... .
T Consensus 158 -~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~-~~~~~~-----~ 223 (257)
T cd08225 158 -LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-------LHQLVLKICQ-GYFAPI-----S 223 (257)
T ss_pred -cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHhc-ccCCCC-----C
Confidence 2233458999999999988889999999999999999999999986543 1122222111 111110 1
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .....+.+++.+|+..+|++||++.||+++
T Consensus 224 ~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 224 P----NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred C----CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1 122358899999999999999999999875
No 320
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.3e-32 Score=307.14 Aligned_cols=261 Identities=22% Similarity=0.302 Sum_probs=193.8
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~ 597 (854)
.+...+.||+|+||.||+|+.. +++.||||++... .......+.+|+.++++++||||+++++++... ...
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 96 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDV 96 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcE
Confidence 3455688999999999999876 6899999998643 223345677899999999999999999988643 357
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+. ++|.+.+.. .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 97 ~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 97 YLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred EEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 99999996 588877732 277888889999999999999998 99999999999999999999999999997
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH-------------
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ------------- 744 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~------------- 744 (854)
...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+..
T Consensus 167 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 167 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred eCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 653322 12234578999999999999999999999999999999999999975431111111100
Q ss_pred --HHHHhhhcC------CcccccCCcc----cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 745 --WAKLHIESG------DIQGIIDPSL----LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 745 --~~~~~~~~~------~~~~~id~~l----~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... .+.+.+...+ ...........+.+++.+|++.||++||++.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 0001111111 111112234567899999999999999999999976
No 321
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.2e-32 Score=297.05 Aligned_cols=244 Identities=25% Similarity=0.366 Sum_probs=195.8
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHH
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 610 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~ 610 (854)
.+||+|+||.||+|..+ +++.||||++..........+.+|+.+++.++|+|++++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 57999999999999875 68899999986554445667889999999999999999999999999999999999999999
Q ss_pred HhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeecc
Q 003046 611 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIV 690 (854)
Q Consensus 611 ~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 690 (854)
+++. ...+++.....++.|++.||+|||+. +++||||||+||+++.++.++|+|||++....... ......
T Consensus 106 ~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~ 176 (292)
T cd06657 106 DIVT-----HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSL 176 (292)
T ss_pred HHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-cccccc
Confidence 8773 23578889999999999999999998 99999999999999999999999999987543322 122334
Q ss_pred cccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHH
Q 003046 691 RGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQ 770 (854)
Q Consensus 691 ~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~ 770 (854)
.|+..|+|||++.+..++.++||||+||++|||++|..||...... .......... .+.+... ..
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~----~~~~~~~~~~---------~~~~~~~--~~ 241 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIRDNL---------PPKLKNL--HK 241 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhhC---------CcccCCc--cc
Confidence 5889999999998888899999999999999999999998754311 1111111110 0111000 01
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 771 SMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 771 ~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+.+++.+|++.+|.+||++.+|+++
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 22346788999999999999999999885
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.3e-32 Score=292.56 Aligned_cols=246 Identities=24% Similarity=0.318 Sum_probs=198.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++.+......++|+||+
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 82 (258)
T cd05578 3 ELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLL 82 (258)
T ss_pred eEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCC
Confidence 45678999999999999886 589999999975432 33567889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
.+++|.+++.. ...+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 83 ~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 83 LGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999843 24688889999999999999999998 99999999999999999999999999987554332
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...+........ .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~--~-------- 218 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-----IRDQIRAKQETA--D-------- 218 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-----HHHHHHHHhccc--c--------
Confidence 223345889999999999888999999999999999999999999765421 111111111110 0
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCH--HHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSI--SEVLK 798 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm--~eV~~ 798 (854)
...+......+.+++.+|++.+|.+||++ +|+.+
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 11111223568899999999999999999 66553
No 323
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.6e-32 Score=287.83 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=200.7
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEEEEec
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEFM 604 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV~e~~ 604 (854)
..+.||+|++|.||+|... +++.|++|++..... .....+.+|++++++++||||+++++.+... ...++|+||+
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 4578999999999999987 688999999875542 3456788999999999999999999999888 8899999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 84 ~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 84 SGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 99999999853 23789999999999999999999998 999999999999999999999999999876544322
Q ss_pred c-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 H-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......++..|+|||.+.+...+.++||||||+++++|++|..||.... ..............
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~--------- 221 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG------NPMAALYKIGSSGE--------- 221 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------chHHHHHhccccCC---------
Confidence 1 1233458899999999998889999999999999999999999997544 11111111110011
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+......+.+++.+|++.+|++||++.|++++
T Consensus 222 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 222 PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 111112224568899999999999999999999875
No 324
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.4e-32 Score=302.70 Aligned_cols=261 Identities=21% Similarity=0.208 Sum_probs=193.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccc--------------hhchHHHHHHhhhcCCCceeeEeeeeee
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG--------------KREFTNEVTLLSRIHHRNLVQFLGYCQE 593 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~--------------~~~~~~E~~~l~~l~HpnIv~l~g~~~~ 593 (854)
.+.+.||+|+||+||+|... +++.||||++....... ...+.+|++++++++|+||+++++++..
T Consensus 12 ~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 91 (335)
T PTZ00024 12 QKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE 91 (335)
T ss_pred hhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec
Confidence 34678999999999999876 68999999986542221 1246789999999999999999999999
Q ss_pred cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 594 EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 594 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
.+..++||||+. |+|.+++. ....+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 92 ~~~~~lv~e~~~-~~l~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 92 GDFINLVMDIMA-SDLKKVVD----RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred CCcEEEEEeccc-cCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCc
Confidence 999999999997 68888884 344588889999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCC-------------cceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003046 674 GLSKFAVDGA-------------SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 674 Gla~~~~~~~-------------~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~ 739 (854)
|+++...... ........++..|+|||++.+. .++.++|||||||++|||++|+.||......+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9987554110 1111223468899999998764 4688999999999999999999999765422211
Q ss_pred cchHHHHHHhhhcCCcccc------------cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 740 RNIVQWAKLHIESGDIQGI------------IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~------------id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......... ...... ..+..... .......+.+++.+|++.+|++||++.|++.+
T Consensus 244 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 244 GRIFELLGTPNE-DNWPQAKKLPLYTEFTPRKPKDLKTI-FPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHhCCCch-hhCcchhhcccccccCcCCcccHHHh-CcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 112111110000 000000 00000000 01123457899999999999999999999875
No 325
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.1e-32 Score=293.26 Aligned_cols=245 Identities=26% Similarity=0.357 Sum_probs=195.1
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
||+|+||.||++... +++.+|+|++..... .....+.+|++++++++||||+++++.+......++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 489999999875533 3355688899999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc-----
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS----- 684 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~----- 684 (854)
.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLEN----VGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 999853 23688999999999999999999998 999999999999999999999999999875433211
Q ss_pred --ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 685 --HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 685 --~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......++..|+|||.......+.++||||||++++|+++|..||...... .+... . ..+....
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~---~-~~~~~~~----- 220 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE----EIFQN---I-LNGKIEW----- 220 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHH---H-hcCCcCC-----
Confidence 1223345788999999998888999999999999999999999999754411 11111 1 1111100
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
.. .......+.+++.+|++.+|++||++.+|.+.|+
T Consensus 221 -~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 221 -PE--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -Cc--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00 0001356789999999999999999966666554
No 326
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.5e-32 Score=296.58 Aligned_cols=264 Identities=22% Similarity=0.259 Sum_probs=191.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+.+.||+|++|.||+|..+ +++.||+|++..... .....+.+|++++++++||||+++++++......++||||+
T Consensus 4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (294)
T PLN00009 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL 83 (294)
T ss_pred eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence 345678999999999999876 688999998864422 22356788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEecccccccCCC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~~~~~~~ 683 (854)
+ ++|.+++... ....+++.....++.||+.||+|||+. +++||||||+||+++. ++.+||+|||+++......
T Consensus 84 ~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 84 D-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred c-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 6 5787777432 223357778888999999999999998 9999999999999985 5679999999997543321
Q ss_pred cceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC-----Cccc
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG-----DIQG 757 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~-----~~~~ 757 (854)
. ......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||......+....+..+........ .+.+
T Consensus 158 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 158 R-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred c-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 1 1122347889999999876 4578999999999999999999999975442211111111100000000 0000
Q ss_pred c-------cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 I-------IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~-------id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ....+. .........+.+++.+|++.+|++||++.+++++
T Consensus 237 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 237 YKSAFPKWPPKDLA-TVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhcccCCCCCHH-HhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000 0011122357889999999999999999999975
No 327
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5e-32 Score=296.53 Aligned_cols=264 Identities=22% Similarity=0.248 Sum_probs=193.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|... +|+.||+|+++..... ....+.+|+.++++++|+||+++++++... +..++|||
T Consensus 9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (309)
T cd07845 9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME 88 (309)
T ss_pred eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence 445678999999999999876 5899999998754322 123466899999999999999999998755 56899999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++ +|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 89 YCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred cCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9974 788887532 25688999999999999999999998 9999999999999999999999999999765433
Q ss_pred CcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh-------hhcCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------IESGD 754 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~-------~~~~~ 754 (854)
.. ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+....+.++.... .....
T Consensus 162 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 162 AK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred cC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 21 1222345788999999875 457899999999999999999999997654222211222111000 00000
Q ss_pred ccccc--CCcccCcC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGII--DPSLLDEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~i--d~~l~~~~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+ ........ .......+.+++.+|++.||++|||+.|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000 00000000 00123457789999999999999999999975
No 328
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.9e-33 Score=299.08 Aligned_cols=252 Identities=28% Similarity=0.379 Sum_probs=198.6
Q ss_pred HHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecC--CccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~ 601 (854)
...|.+.++||+||.+.||++.-.+.+.+|+|++... +.+...-|..|+..|.+++ |.+|++|++|-..++.+++||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3456677899999999999999888888898876533 3344567999999999994 999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
|+- ..+|...|.... .....| .+..+..|++.|+.++|.. ||||.||||.|+|+-. |.+||+|||+|.-+..
T Consensus 440 E~G-d~DL~kiL~k~~--~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKK--SIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred ecc-cccHHHHHHhcc--CCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 965 569999986432 112234 6678999999999999999 9999999999999864 6899999999987665
Q ss_pred CCcc-eeecccccccccCccccccCc-----------CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh
Q 003046 682 GASH-VSSIVRGTVGYLDPEYYISQQ-----------LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 682 ~~~~-~~~~~~gt~~Y~aPE~~~~~~-----------~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
..+. .....+||+.||+||.+.... .+.++||||+|||||+|+.|+.||..-. + .|.+
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~------n--~~aK-- 581 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII------N--QIAK-- 581 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH------H--HHHH--
Confidence 5443 345567999999999985432 5678999999999999999999996422 2 2222
Q ss_pred hhcCCcccccCCcccCcCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYD-IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~-~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+..+.||.-.-+|+ ....+++.+++..|++.||++||++.|+++|
T Consensus 582 -----l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 582 -----LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -----HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 33445554322232 2233448999999999999999999999987
No 329
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=4.7e-32 Score=295.36 Aligned_cols=265 Identities=23% Similarity=0.284 Sum_probs=194.8
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecC-------
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------- 595 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------- 595 (854)
..+.+.+.||+|+||.||+|..+ +++.||+|+++.... .....+.+|++++++++||||+++++++....
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 44566789999999999999986 588999999875432 22346778999999999999999999987654
Q ss_pred ---eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEE
Q 003046 596 ---RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 596 ---~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~D 672 (854)
..++|+||+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999986 676666432 34688999999999999999999998 999999999999999999999999
Q ss_pred ecccccccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
||++...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~- 238 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC- 238 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC-
Confidence 99997654433222223346788999998865 4578899999999999999999999975432111111111100000
Q ss_pred cCCcccc--------cCC------cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 752 SGDIQGI--------IDP------SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ~~~~~~~--------id~------~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+ .++ ....... .....+.+++.+|++.+|++||++.+|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFS-FIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hhhcccccccccccccccccccccchhhhcC-CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000000 000 0000000 113468899999999999999999999864
No 330
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=4.1e-32 Score=294.28 Aligned_cols=250 Identities=24% Similarity=0.329 Sum_probs=194.2
Q ss_pred HhhccccccCcEEEEEEEEC----CCcEEEEEEEecCCc----cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSY----QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~----~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.||+|+||.||+++.. +|+.||+|++..... ...+.+.+|+++++++ +|+||+++++++..+...++
T Consensus 3 ~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (290)
T cd05613 3 ELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHL 82 (290)
T ss_pred eeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEE
Confidence 34678999999999999863 688999999875422 2345678899999999 59999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++..
T Consensus 83 v~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 83 ILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999853 34577888888999999999999998 9999999999999999999999999999765
Q ss_pred cCCCcceeecccccccccCccccccC--cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQ--QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
............|+..|+|||.+... .++.++||||||+++|+|++|+.||....... .............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~---~~~~~~~~~~~~~---- 228 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN---SQAEISRRILKSE---- 228 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc---cHHHHHHHhhccC----
Confidence 43322222345589999999998753 46789999999999999999999996432111 1122222111111
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
+. ++......+.+++.+|++.+|++|| ++.++..+
T Consensus 229 ---~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 229 ---PP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ---CC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 00 1111234578999999999999997 67777765
No 331
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=9.9e-32 Score=284.35 Aligned_cols=246 Identities=25% Similarity=0.419 Sum_probs=199.3
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|++|.||+|+.. +++.||+|.+..... .....+.+|++++++++|+|++++++++..++..++|+||++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (254)
T cd06627 3 QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAE 82 (254)
T ss_pred eeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCC
Confidence 45678999999999999876 578999999976543 345678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.........
T Consensus 83 ~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 83 NGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999998843 35689999999999999999999998 9999999999999999999999999999865543322
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....++..|+|||...+..++.++||||+|+++++|++|+.||..... ....|... .... +.+
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~~~~~~~~---~~~~-----~~~-- 219 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----MAALFRIV---QDDH-----PPL-- 219 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHh---ccCC-----CCC--
Confidence 2334588999999999888889999999999999999999999865431 01111111 1111 011
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+......+.+++.+|+..+|++||++.|++.+
T Consensus 220 --~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 220 --PEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred --CCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 11123467899999999999999999999853
No 332
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.98 E-value=4.6e-32 Score=288.78 Aligned_cols=244 Identities=23% Similarity=0.275 Sum_probs=187.2
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHh-hhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLL-SRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l-~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|... +++.||||+++..... ....+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999875 5889999998654321 122344454443 445899999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||+++....
T Consensus 82 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999998843 34578888999999999999999998 999999999999999999999999999875432
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....|+..|+|||.+.+..++.++||||||+++|||++|..||...... .+.. . ...+... ......
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~---~-~~~~~~~--~~~~~~-- 217 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD----AVFD---N-ILSRRIN--WPEEVK-- 217 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH----HHHH---H-HHhcccC--CCCccc--
Confidence 22335889999999998888999999999999999999999999754311 1111 1 1111110 000111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
......+.+++.+|++.+|++||++.++.+.|.
T Consensus 218 --~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 218 --EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred --ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 112345789999999999999998766655443
No 333
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=8.4e-33 Score=306.49 Aligned_cols=259 Identities=23% Similarity=0.314 Sum_probs=191.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~lV 600 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++... ...++|
T Consensus 7 y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 86 (336)
T cd07849 7 YQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIV 86 (336)
T ss_pred eEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEE
Confidence 456789999999999999875 68999999986432 22345577899999999999999999987654 357999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
+||+.+ +|.+.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 87 ~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 87 QELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred ehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 999974 7777663 34588889999999999999999998 99999999999999999999999999987554
Q ss_pred CCCcc--eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc---CC
Q 003046 681 DGASH--VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES---GD 754 (854)
Q Consensus 681 ~~~~~--~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~---~~ 754 (854)
..... ......||..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ........... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~----~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH----QLNLILGVLGTPSQED 233 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHcCCCCHHH
Confidence 32221 1123458999999998765 568899999999999999999999996543211 11111110000 00
Q ss_pred cccccCCcc-------c--CcCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSL-------L--DEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l-------~--~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+..+.+... . ...+ ......+.+++.+|++.+|++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 0 0000 1123458899999999999999999999988
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.98 E-value=7.6e-32 Score=298.95 Aligned_cols=265 Identities=24% Similarity=0.337 Sum_probs=193.8
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhc-CCCceeeEeeeeeec--CeEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE--GRSVL 599 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~--~~~~l 599 (854)
..+.+.+.||+|+||.||+|... +++.+|||++... .......+..|+.+++++ +||||++++++|... ...++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 34566789999999999999876 5789999988543 223345577899999999 999999999998653 36899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 v~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 87 VFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred Eecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 999997 589888743 2678888999999999999999998 9999999999999999999999999999755
Q ss_pred cCCCcc----eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH------
Q 003046 680 VDGASH----VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL------ 748 (854)
Q Consensus 680 ~~~~~~----~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~------ 748 (854)
...... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 433211 2223458999999998765 45788999999999999999999999654321111111111000
Q ss_pred -hhhcCCcccccCCccc------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 -HIESGDIQGIIDPSLL------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 -~~~~~~~~~~id~~l~------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.......+++.... ..........+.+++.+|++.+|++||++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000100000 00001123468899999999999999999999986
No 335
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=1.5e-32 Score=303.12 Aligned_cols=245 Identities=24% Similarity=0.424 Sum_probs=202.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+...||+|.|+.|.+|++. ++..||||.+.+.... ....+.+|+++|..++|||||+++.+...+..+++||||+
T Consensus 58 y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya 137 (596)
T KOG0586|consen 58 YVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYA 137 (596)
T ss_pred eeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEec
Confidence 445688999999999999876 6899999999866432 2344789999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
.+|.+.+++. ...++....+..++.|+.+|++|||++ .|+|||||++||||+.+.++||+|||++..+.. .
T Consensus 138 ~~ge~~~yl~----~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~--~ 208 (596)
T KOG0586|consen 138 SGGELFDYLV----KHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY--G 208 (596)
T ss_pred cCchhHHHHH----hcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc--c
Confidence 9999999994 345566688889999999999999999 999999999999999999999999999987753 3
Q ss_pred ceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......+|++.|.|||++.+.++ .+.+|+||+|+++|-|+.|..||++....+.....+. ..+
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~----------------gk~ 272 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR----------------GKY 272 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee----------------eee
Confidence 45567789999999999998776 4689999999999999999999997664332211111 111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+-.+.+ ...+.+++++.+-.+|.+|++++++.++
T Consensus 273 rIp~~m--s~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 273 RIPFYM--SCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ccccee--echhHHHHHHhhccCccccCCHHHhhhh
Confidence 111111 1246688999999999999999999887
No 336
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=5.8e-32 Score=288.91 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=192.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-----ccchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~l 599 (854)
+.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++|+||+++++++... +..++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 345789999999999999875 58999999875321 22335688899999999999999999998654 45789
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||+++++|.+++.. ...+++.....++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++..
T Consensus 84 v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 84 FVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 9999999999998853 23477888899999999999999998 9999999999999999999999999999754
Q ss_pred cCCC--cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 680 VDGA--SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 680 ~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
.... ........|+..|+|||++.+..++.++|||||||+++||++|+.||...... ..+.+ ....+ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~----~~~~~-~-- 226 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AAIFK----IATQP-T-- 226 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HHHHH----HHcCC-C--
Confidence 3211 11112345889999999999888999999999999999999999999654311 11111 11111 0
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+......+.+++.+|++ +|..||+..+++.|
T Consensus 227 ------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 227 ------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 011122233568899999999 47999999988765
No 337
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=4.8e-32 Score=296.12 Aligned_cols=261 Identities=20% Similarity=0.253 Sum_probs=190.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecC--------e
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--------R 596 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--------~ 596 (854)
+.+.++||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++...+ .
T Consensus 14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 93 (310)
T cd07865 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGS 93 (310)
T ss_pred eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCce
Confidence 455788999999999999876 688999998865422 12334568999999999999999999986654 4
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
.++||||+.+ +|.+.+.. ....+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++
T Consensus 94 ~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 94 FYLVFEFCEH-DLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred EEEEEcCCCc-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 5999999974 78777743 233688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcc---eeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc
Q 003046 677 KFAVDGASH---VSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES 752 (854)
Q Consensus 677 ~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~ 752 (854)
......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||......... ..+.........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~-~~~~~~~~~~~~ 245 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQL-TLISQLCGSITP 245 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCCh
Confidence 755432221 11233578899999988764 4788999999999999999999999754421111 111111100000
Q ss_pred CCccc------------------ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 753 GDIQG------------------IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 753 ~~~~~------------------~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... .+...+... .....+.+++.+|++.+|++||+++|+++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000 000000000 012356789999999999999999999875
No 338
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=8.3e-32 Score=290.09 Aligned_cols=261 Identities=21% Similarity=0.260 Sum_probs=196.8
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.||+|++|.||+|... +++.+++|++..... .....+..|++++++++|+||+++++++..+...++|+||+++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 82 (283)
T cd05118 3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT 82 (283)
T ss_pred cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence 3468999999999999876 688999999865432 2356788899999999999999999999999999999999975
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
+|.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||.+....... ..
T Consensus 83 -~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~ 154 (283)
T cd05118 83 -DLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RP 154 (283)
T ss_pred -CHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cc
Confidence 888877532 25688999999999999999999998 99999999999999999999999999987654433 11
Q ss_pred eecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC-----
Q 003046 687 SSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID----- 760 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id----- 760 (854)
.....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+....+........ ........+
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPD-PEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc-hHhcccchhhhhhh
Confidence 2223478899999998876 789999999999999999999999965442111111111000000 000000000
Q ss_pred ------Ccc--cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 ------PSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ------~~l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ..........++.+++..|++.+|.+||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000 001112234578899999999999999999999874
No 339
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.8e-33 Score=293.91 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=200.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecC---CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
-++||+|+||.||-++.+ +|+.+|.|.+.+. ...++.-...|-++|.+++.+.||.+--.|...+.++||+..|.|
T Consensus 190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNG 269 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNG 269 (591)
T ss_pred eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecC
Confidence 478999999999999876 6899999988654 234456678899999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.-+|+... ...+++..+.-++.+|+.||++||+. +||+||+||+|||+|+.|+++|+|.|+|..+..+..+.
T Consensus 270 GDLkfHiyn~g--~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~ 344 (591)
T KOG0986|consen 270 GDLKFHIYNHG--NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIR 344 (591)
T ss_pred CceeEEeeccC--CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCCccc
Confidence 99999997653 35688999999999999999999999 99999999999999999999999999998877665544
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
. .+||.+|||||++....|+...|.||+||++|||+.|+.||........-.. +.....+. ..+
T Consensus 345 ~--rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE----vdrr~~~~----------~~e 408 (591)
T KOG0986|consen 345 G--RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE----VDRRTLED----------PEE 408 (591)
T ss_pred c--ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH----HHHHHhcc----------hhh
Confidence 3 3699999999999999999999999999999999999999975441110001 11111110 112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
++.....+...+....++.||++|-. +.+|.+|
T Consensus 409 y~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 409 YSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred cccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 33333445677888889999999874 4566554
No 340
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=5e-32 Score=293.26 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=197.1
Q ss_pred HhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC----ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.||+|+||.||+++.. +++.||||+++... ......+..|++++.++ +||||+++++.+..+...++
T Consensus 3 ~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~l 82 (288)
T cd05583 3 ELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHL 82 (288)
T ss_pred eEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEE
Confidence 34678999999999999753 56889999987432 12345678899999999 59999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||+++..
T Consensus 83 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 83 ILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999998843 34578888999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCcceeecccccccccCccccccCc--CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
............|+..|+|||.+.+.. .+.++||||||+++|||++|..||....... ............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~----- 227 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN---SQSEISRRILKS----- 227 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc---hHHHHHHHHHcc-----
Confidence 443332233345899999999987655 7889999999999999999999986432111 111111111111
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
++..... ....+.+++.+|++.+|++|||+.+|.+.|+..
T Consensus 228 --~~~~~~~----~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 --KPPFPKT----MSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred --CCCCCcc----cCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0111111 223477899999999999999999888877654
No 341
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=7.9e-32 Score=290.44 Aligned_cols=242 Identities=25% Similarity=0.320 Sum_probs=186.5
Q ss_pred cccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHH---HhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 533 KIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVT---LLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~---~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.||+|+||.||+|... +++.||+|++...... ....+..|.. +++...||+|+++++++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999875 5889999998754321 1223344443 3444579999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 81 g~~L~~~l~----~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLS----QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 999998884 234689999999999999999999998 99999999999999999999999999987543322
Q ss_pred eeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........ ....... .. .+..+.
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~----~~~~~~~-~~------~~~~~~ 219 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMT-LT------MAVELP 219 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch----HHHHHHh-hc------cCCCCC
Confidence 1234589999999999754 688999999999999999999999976531111 1110000 00 111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.. ....+.+++.+|+..+|++|| ++.+++++
T Consensus 220 ~~----~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 220 DS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred Cc----CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 11 234688999999999999999 99999865
No 342
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=8e-32 Score=294.93 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=193.9
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
..++...+.||+|+||.||+|+.. +++.+|+|.+.... .....++.+|+++++.++|+|++++++++......++|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 334555678999999999999876 57889999886432 22234677899999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
+||+. |++.+.+.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 94 MEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EEccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 99996 688777642 234578889999999999999999998 99999999999999999999999999987543
Q ss_pred CCCcceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
.. ....|+..|+|||.+. ...++.++|||||||++|||++|+.||....... .+..+ ..+...
T Consensus 167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~-----~~~~~~- 232 (308)
T cd06634 167 PA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---ALYHI-----AQNESP- 232 (308)
T ss_pred Cc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH---HHHHH-----hhcCCC-
Confidence 22 2235789999999975 3567889999999999999999999986543110 01111 111111
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
... .......+.+++.+|++.+|++||++.+|+++-.
T Consensus 233 ----~~~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 233 ----ALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ----CcC---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 100 1123345789999999999999999999998744
No 343
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=8.7e-32 Score=290.24 Aligned_cols=262 Identities=21% Similarity=0.276 Sum_probs=194.7
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.||+|+||+||+|+.. +++.||||++..... .......+|+..+++++ |+|++++++++..++..++||||+ +
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 81 (283)
T cd07830 3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-E 81 (283)
T ss_pred eheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-C
Confidence 4678999999999999986 478899999865422 22334557899999999 999999999999999999999999 8
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.... ...+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||+++........
T Consensus 82 ~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (283)
T cd07830 82 GNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY- 155 (283)
T ss_pred CCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc-
Confidence 89988885432 34689999999999999999999998 9999999999999999999999999999765432221
Q ss_pred eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH---------HHHHhhhcCCcc
Q 003046 687 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ---------WAKLHIESGDIQ 756 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~---------~~~~~~~~~~~~ 756 (854)
....++..|+|||++.. ..++.++|+||||++++||++|+.||......+....+.. |...........
T Consensus 156 -~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 156 -TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred -CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 22457889999998854 5678999999999999999999999965442111111111 111110000111
Q ss_pred cccCCccc---CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLL---DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+..... ..........+.+++.+|++.+|++||+++|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000 00000113568899999999999999999999864
No 344
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=1.1e-31 Score=289.63 Aligned_cols=262 Identities=22% Similarity=0.284 Sum_probs=193.4
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhc---CCCceeeEeeeeeecCe-----EE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRI---HHRNLVQFLGYCQEEGR-----SV 598 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l---~HpnIv~l~g~~~~~~~-----~~ 598 (854)
+.+.||+|+||.||+|+.+ +++.||+|+++..... ....+.+|+.+++++ .|+|++++++++...+. .+
T Consensus 3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 82 (287)
T cd07838 3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT 82 (287)
T ss_pred EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence 4578999999999999987 4899999998743221 234566788777666 59999999999988776 89
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
++|||+.+ +|.+++.... ...+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||++..
T Consensus 83 l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 83 LVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred EEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 99999974 8888875422 23588999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc--
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ-- 756 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~-- 756 (854)
...... .....++..|+|||++.+..++.++|||||||++|||++|+.||......+....+.+............
T Consensus 157 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07838 157 YSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV 234 (287)
T ss_pred ccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence 533221 1223478899999999998999999999999999999999999876542222212211110000000000
Q ss_pred ----cccCCccc---CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 ----GIIDPSLL---DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ----~~id~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ .....+....+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00000000 01111233567899999999999999999999864
No 345
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=6.2e-32 Score=293.82 Aligned_cols=256 Identities=19% Similarity=0.236 Sum_probs=180.8
Q ss_pred HHHHHhhccccccCcEEEEEEEECC----CcEEEEEEEecCCccch-----------hchHHHHHHhhhcCCCceeeEee
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSYQGK-----------REFTNEVTLLSRIHHRNLVQFLG 589 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~~~~~-----------~~~~~E~~~l~~l~HpnIv~l~g 589 (854)
...+.+.++||+|+||.||+|.+.+ +..+|+|+......... .....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3456678899999999999998764 34566665432221110 01122334456678999999999
Q ss_pred eeeecC----eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC
Q 003046 590 YCQEEG----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 590 ~~~~~~----~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
++.... ..++++|++.. ++.+.+.. ....++..+..++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 776543 34667776643 55555532 22346777889999999999999998 99999999999999999
Q ss_pred CcEEEEEecccccccCCCcc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003046 666 MRAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 666 ~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~ 739 (854)
+.++|+|||+|+........ ......||+.|+|||++.+..++.++|||||||+++||++|+.||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 99999999999765332211 112346999999999999999999999999999999999999999765322111
Q ss_pred cch--HHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 740 RNI--VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 740 ~~l--~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
... .++.. .+..+.+. .. .....+.+++..|++.+|++||++.++.+.|
T Consensus 243 ~~~~~~~~~~-~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 IHAAKCDFIK-RLHEGKIK-------IK----NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhHHHHHH-Hhhhhhhc-------cC----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111 11111 11111110 01 1135688999999999999999999999876
No 346
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=1.2e-31 Score=294.03 Aligned_cols=261 Identities=18% Similarity=0.254 Sum_probs=191.8
Q ss_pred hhccccccCcEEEEEEEECCCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 530 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+|.|+++.||++.. +++.||||++... .......+.+|++++++++|+||+++++++...+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 345556666666666554 5899999998754 2334567899999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc---
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS--- 684 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~--- 684 (854)
+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 85 ~l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 85 SCEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 9999986432 23577888899999999999999998 999999999999999999999999998864432111
Q ss_pred ---ceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh----h----
Q 003046 685 ---HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI----E---- 751 (854)
Q Consensus 685 ---~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~----~---- 751 (854)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||....... .+.+...... .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ---MLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhccCccccccCch
Confidence 11123347789999999876 458889999999999999999999997543111 1111110000 0
Q ss_pred ---cCCccc----ccCCcc----cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 752 ---SGDIQG----IIDPSL----LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ---~~~~~~----~id~~l----~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...... ..++.. ...........+.+++.+|++.+|++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 000000 011122234568899999999999999999999987
No 347
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.98 E-value=2.2e-32 Score=302.12 Aligned_cols=267 Identities=23% Similarity=0.299 Sum_probs=200.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecC-----eEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-----RSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-----~~~l 599 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++|+||+++++++.... ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 345678999999999999976 48999999987543 334567889999999999999999999998775 7899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||++ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++...
T Consensus 82 v~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 82 VTELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred Eecchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 999998 478888743 33788999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCc--ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh------
Q 003046 680 VDGAS--HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI------ 750 (854)
Q Consensus 680 ~~~~~--~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~------ 750 (854)
..... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+....+........
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 44321 112234578899999999887 889999999999999999999999976542211111111100000
Q ss_pred -hcCCcccccCC-cccC-----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHH
Q 003046 751 -ESGDIQGIIDP-SLLD-----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQD 802 (854)
Q Consensus 751 -~~~~~~~~id~-~l~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~ 802 (854)
......+.+.. .... .........+.+++.+|++.+|++||++.+++++ ++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 00000000000 0000 0011123467899999999999999999999987 554
No 348
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.9e-32 Score=321.26 Aligned_cols=264 Identities=27% Similarity=0.426 Sum_probs=209.7
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEC----C----CcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeee
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLK----D----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQ 592 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~----~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~ 592 (854)
+.+....+.+.||+|.||.|++|... . ...||||.++... ....+.+..|+++|+.+ +|+||+.++|+|.
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 33333345679999999999999754 1 3469999997653 34567899999999999 6999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccc----------ccc--ccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCe
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTL----------THE--QRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~----------~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
.++..++|+||+..|+|.++|+... ... ..+.....+.++.|||.|++||++. +++||||.++||
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNV 449 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNV 449 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhE
Confidence 9999999999999999999997543 011 2388889999999999999999999 999999999999
Q ss_pred EEcCCCcEEEEEecccccccCCCcceeecccc--cccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccc
Q 003046 661 LLDKHMRAKVSDFGLSKFAVDGASHVSSIVRG--TVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGA 737 (854)
Q Consensus 661 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~ 737 (854)
|++.+..+||+|||+|+...+..........| ...|||||.+....++.++|||||||+||||+| |..|+.+...
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-- 527 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-- 527 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc--
Confidence 99999999999999998655544443332333 456999999999999999999999999999999 8889875221
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+.+ .+++|. +.+.+..+..++.+++..||+.+|++||++.|+++.++..+.
T Consensus 528 -~~~l~~----~l~~G~---------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 528 -TEELLE----FLKEGN---------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred -HHHHHH----HHhcCC---------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 112333 233332 122233345678899999999999999999999999999543
No 349
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=3.3e-32 Score=303.85 Aligned_cols=268 Identities=23% Similarity=0.380 Sum_probs=201.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecC------eEEEEEE
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSVLVYE 602 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------~~~lV~e 602 (854)
.+.||+|+||.||+|+.+ .|+.||||.++... ....+....|+++|++++|+|||++++.-.+.. ..++|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 468999999999999966 79999999997654 233456778999999999999999998765543 5689999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc--CCC--cEEEEEeccccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KHM--RAKVSDFGLSKF 678 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~--~~~--~~kL~DFGla~~ 678 (854)
||.+|+|...|... .....|++.+.+.+..+++.||.|||++ +|+||||||.||++- .+| .-||+|||.|+-
T Consensus 98 yC~gGsL~~~L~~P-EN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSP-ENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred ecCCCcHHHHhcCc-ccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 99999999999765 3456799999999999999999999998 999999999999984 334 369999999997
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
..++. .....+||..|++||++.. +.|+..+|.|||||++||+.||..||.....+....+ +.|....-+......
T Consensus 174 l~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~-~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 174 LDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKE-IMWHIITKKPSGVAI 250 (732)
T ss_pred CCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccch-hhhhhhccCCCceeE
Confidence 76554 5566789999999999995 8899999999999999999999999976543321111 222221111111111
Q ss_pred ccCCcccC------------cCCHHHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHHHHHH
Q 003046 758 IIDPSLLD------------EYDIQSMWKIEEKALMCVLPHGHMRP--SISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~------------~~~~~~~~~l~~l~~~Cl~~~P~~RP--sm~eV~~~L~~~~~ 805 (854)
..++...+ .........+-.+...++..+|++|. ...+....+..++.
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 12222211 11223344566677777888888888 66666666666654
No 350
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=2.5e-32 Score=302.89 Aligned_cols=265 Identities=21% Similarity=0.300 Sum_probs=195.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~l 599 (854)
+.+.+.||+|+||+||+|+.. +++.||||.+... .......+.+|+.+++.++|+||+++++++... ...++
T Consensus 7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 86 (337)
T cd07858 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYI 86 (337)
T ss_pred eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEE
Confidence 445678999999999999875 6899999998653 222345677899999999999999999988644 34799
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||+. ++|.+++. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 87 v~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 87 VYELMD-TDLHQIIR----SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEeCCC-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 999996 68888774 335688999999999999999999998 9999999999999999999999999999765
Q ss_pred cCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH-------hhh
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL-------HIE 751 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~-------~~~ 751 (854)
.... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...........+...... .+.
T Consensus 159 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 159 SEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred CCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence 4322 22233457889999998865 56889999999999999999999999754321111111110000 000
Q ss_pred cCCc-------ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHH
Q 003046 752 SGDI-------QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQD 802 (854)
Q Consensus 752 ~~~~-------~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~ 802 (854)
.... ....++.+.. ........+.+++.+|++.+|++||++.|+++| ++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 238 NEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred chhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 0000 0000000000 011233567899999999999999999999998 554
No 351
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=3.1e-32 Score=290.05 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=195.5
Q ss_pred HHhhccccccCcEEEEEEEECC-CcEEEEEEEecCC-----ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
|.+.+.||+|+||.||++.... +..+++|+++... .....++..|+.++++++||||+++++++.+....++|+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 4567889999999999998763 4556666665321 122345677899999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||||+||+++. +.+||+|||+++....
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecCC
Confidence 99999999998865444456789999999999999999999998 9999999999999975 5699999999876543
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
... ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||.... ......... .+.. +
T Consensus 158 ~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-------~~~~~~~~~-~~~~-----~ 223 (260)
T cd08222 158 SCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-------FLSVVLRIV-EGPT-----P 223 (260)
T ss_pred Ccc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHH-cCCC-----C
Confidence 322 2233458899999999988888999999999999999999999986433 111111111 1111 1
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .+......+.+++.+|++.+|++||++.|++++
T Consensus 224 ~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 224 S----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred C----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1 122333568899999999999999999999875
No 352
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=4.1e-32 Score=300.68 Aligned_cols=264 Identities=19% Similarity=0.280 Sum_probs=193.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee----cCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----~~~~~lV 600 (854)
+.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.. ....++|
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEE
Confidence 445678999999999999876 68999999987542 2334567789999999999999999998753 3468999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+. |+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 87 ~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 87 MDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred Eehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99996 688888743 34588999999999999999999998 99999999999999999999999999997543
Q ss_pred CCCcc---eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH-------HHHh
Q 003046 681 DGASH---VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW-------AKLH 749 (854)
Q Consensus 681 ~~~~~---~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~-------~~~~ 749 (854)
..... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+..- ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence 32211 1223468999999999865 46889999999999999999999999765421110000000 0000
Q ss_pred hhcCCcccccCC-cccCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 IESGDIQGIIDP-SLLDEY-----DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~-~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+...++. ...... .......+.+++.+|++.+|++||++.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000000 000000 11224568899999999999999999999886
No 353
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=2.5e-31 Score=291.77 Aligned_cols=242 Identities=26% Similarity=0.406 Sum_probs=190.1
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
..+.||+|+||+||+|+.. +++.||+|++..... .....+.+|+++++.++|||++++++++.+....++||||+.
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 3567999999999999875 688999999875432 223467889999999999999999999999999999999996
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
|++.+.+.. ....+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 105 -~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 105 -GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred -CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 577777642 234588999999999999999999998 999999999999999999999999999864322
Q ss_pred eeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 686 VSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.....|+..|+|||++. ...++.++|||||||++|||++|..||...... ..... ... .......
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~----~~~~~---~~~-~~~~~~~--- 241 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYH---IAQ-NDSPTLQ--- 241 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH----HHHHH---HHh-cCCCCCC---
Confidence 12345889999999984 456888999999999999999999998654311 11111 111 1111111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.+|.+||++.+++.+
T Consensus 242 -~~~----~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 -SNE----WTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -ccc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12347889999999999999999999976
No 354
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=4.3e-31 Score=283.05 Aligned_cols=235 Identities=20% Similarity=0.317 Sum_probs=182.6
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCCCCHHH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKE 611 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~ 611 (854)
||+|+||.||++..+ +++.+|+|++...... .. |+.....+ +||||+++++.+...+..++||||+++++|.+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~ 98 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AI--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD 98 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hh--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence 599999999999875 6788999998643221 11 22222222 79999999999999999999999999999999
Q ss_pred hhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-cEEEEEecccccccCCCcceeecc
Q 003046 612 HLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGASHVSSIV 690 (854)
Q Consensus 612 ~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~~~ 690 (854)
++.. ...+++..+..++.|+++||.|||+. +++||||||+||+++.++ .++|+|||+++...... ..
T Consensus 99 ~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-----~~ 166 (267)
T PHA03390 99 LLKK----EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS-----CY 166 (267)
T ss_pred HHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc-----cC
Confidence 9853 23789999999999999999999998 999999999999999998 99999999987553221 23
Q ss_pred cccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHH
Q 003046 691 RGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQ 770 (854)
Q Consensus 691 ~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~ 770 (854)
.|+..|+|||++.+..++.++|||||||+++||++|+.||....... .....+.... .... . ... .
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~--~~~~-~-----~~~----~ 232 (267)
T PHA03390 167 DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE--LDLESLLKRQ--QKKL-P-----FIK----N 232 (267)
T ss_pred CCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch--hhHHHHHHhh--cccC-C-----ccc----c
Confidence 58899999999999899999999999999999999999997443111 1122222211 0000 0 011 2
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 003046 771 SMWKIEEKALMCVLPHGHMRPS-ISEVLKD 799 (854)
Q Consensus 771 ~~~~l~~l~~~Cl~~~P~~RPs-m~eV~~~ 799 (854)
....+.+++.+|++.+|.+||+ ++|+++|
T Consensus 233 ~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 233 VSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 3345788999999999999995 6888764
No 355
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=2.4e-31 Score=289.30 Aligned_cols=250 Identities=25% Similarity=0.338 Sum_probs=190.4
Q ss_pred HHhhccccccCcEEEEEEEECC-CcEEEEEEEecCCc-cchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+.+.||+|+||.||+|.+++ ++.||||+++.... .....+..|+.++.+.+ ||||+++++++..+...++||||+
T Consensus 17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 96 (296)
T cd06618 17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM 96 (296)
T ss_pred heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc
Confidence 3457899999999999999874 88999999875432 23445667777777775 999999999999999999999998
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
. +++.+++... ...+++..+..++.|++.||+|||+. .+|+||||+|+||+++.++.+||+|||++........
T Consensus 97 ~-~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 97 S-TCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred C-cCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 5 4676665321 33688899999999999999999973 2899999999999999999999999999876543222
Q ss_pred ceeecccccccccCccccccCc----CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQ----LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
. ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+......... ...
T Consensus 171 ~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~-~~~--- 238 (296)
T cd06618 171 K--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE------FEVLTKILQEE-PPS--- 238 (296)
T ss_pred c--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH------HHHHHHHhcCC-CCC---
Confidence 1 2234788999999987654 788999999999999999999999653211 11111111111 000
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.. ......++.+++.+|++.+|++||++.+++++
T Consensus 239 --~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 --LPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred --CCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 00123458899999999999999999999877
No 356
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.1e-31 Score=289.09 Aligned_cols=261 Identities=24% Similarity=0.279 Sum_probs=196.4
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.||+|+||.||+|+.. +++.+|+|++.... ......+..|++++++++|+|++++++++...+..++|+||++
T Consensus 3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~- 81 (282)
T cd07829 3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD- 81 (282)
T ss_pred eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-
Confidence 3467999999999999887 48999999987653 2234567889999999999999999999999999999999998
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ...+++..+..++.+++.||+|||+. +|+||||+|+||++++++.+||+|||+++....... .
T Consensus 82 ~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~ 154 (282)
T cd07829 82 MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-T 154 (282)
T ss_pred cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-c
Confidence 5899988532 14688999999999999999999998 999999999999999999999999999876543322 1
Q ss_pred eecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH-------hhh-----cC
Q 003046 687 SSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL-------HIE-----SG 753 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~-------~~~-----~~ 753 (854)
.....++..|+|||.+.+. .++.++|||||||+++||++|+.||......+....+.+.... .+. ..
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 2223457889999998776 7889999999999999999999999765422111111111000 000 00
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.............. ......+.+++..|+..+|++||++.+|+.+
T Consensus 235 ~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 235 TFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000000000 0113468999999999999999999999864
No 357
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-33 Score=326.57 Aligned_cols=245 Identities=25% Similarity=0.390 Sum_probs=193.7
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
...||.|.||.||-|... +|+-.|||-++... ........+|+.++..++|||+|+.+|+-..++..++.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 457999999999999755 68888999876443 233456889999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce-
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV- 686 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~- 686 (854)
+|.+.+. .++..++.....+..|++.|++|||+. |||||||||.||+|+.+|.+|++|||.|..........
T Consensus 1320 sLa~ll~----~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1320 SLASLLE----HGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred cHHHHHH----hcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 9999983 344566666677889999999999998 99999999999999999999999999998765543211
Q ss_pred --eecccccccccCccccccC---cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH-HhhhcCCcccccC
Q 003046 687 --SSIVRGTVGYLDPEYYISQ---QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-LHIESGDIQGIID 760 (854)
Q Consensus 687 --~~~~~gt~~Y~aPE~~~~~---~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~-~~~~~~~~~~~id 760 (854)
.....||+.|||||++.+. ....++||||+|||+.||+||++||...+. +|+- .++.-|..
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--------e~aIMy~V~~gh~----- 1459 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--------EWAIMYHVAAGHK----- 1459 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--------hhHHHhHHhccCC-----
Confidence 2345699999999999764 355689999999999999999999975441 1221 11111221
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.+.....+=.+++.+|+..||++|.++.|++++
T Consensus 1460 ----Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 ----PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ----CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 12222333456688999999999999988877654
No 358
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=6.2e-32 Score=290.46 Aligned_cols=247 Identities=25% Similarity=0.337 Sum_probs=197.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e 602 (854)
|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+..|++++++++ ||||+++++++...+..++|||
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE 82 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence 345678999999999999876 68999999986532 223456788999999998 9999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
++++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 83 YAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999853 34689999999999999999999998 9999999999999999999999999998755432
Q ss_pred Cc-------------------ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchH
Q 003046 683 AS-------------------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 743 (854)
Q Consensus 683 ~~-------------------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~ 743 (854)
.. .......|+..|+|||......++.++||||||++++++++|+.||...... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~ 231 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----LTF 231 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH----HHH
Confidence 21 1122345789999999998888999999999999999999999999755411 111
Q ss_pred HHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCH----HHHHHH
Q 003046 744 QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI----SEVLKD 799 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm----~eV~~~ 799 (854)
+ ...... ...+......+.+++.+|++.+|++||++ +|+++|
T Consensus 232 ~---~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 232 Q---KILKLE-----------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred H---HHHhcC-----------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1 111100 01111123457899999999999999999 777654
No 359
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=9.4e-32 Score=293.96 Aligned_cols=264 Identities=20% Similarity=0.270 Sum_probs=190.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeeeeecC--------e
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--------R 596 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--------~ 596 (854)
+.+.++||+|+||.||+|..+ +++.+|||++...... ....+.+|++++++++||||+++++++.... .
T Consensus 10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 89 (311)
T cd07866 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGS 89 (311)
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCce
Confidence 445688999999999999876 5889999998654322 2345678999999999999999999875433 4
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
.++|+||+.+ +|.+.+.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 90 ~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 90 VYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred EEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccc
Confidence 6999999975 66666642 234689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcc----------eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH
Q 003046 677 KFAVDGASH----------VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW 745 (854)
Q Consensus 677 ~~~~~~~~~----------~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~ 745 (854)
+........ ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.+.........+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 754332111 1123357889999998865 45789999999999999999999999754421111111110
Q ss_pred HHHhhh-----cCCccccc--------CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 746 AKLHIE-----SGDIQGII--------DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 746 ~~~~~~-----~~~~~~~i--------d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...... ...+.... .+.+...+ ......+.+++.+|++.+|++|||+.|++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF-GKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHHHc-ccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000 00000000 00000000 1112467899999999999999999999864
No 360
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.5e-32 Score=273.55 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=195.9
Q ss_pred hccccccCcEEEEEEE-ECCCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 531 EKKIGSGGFGVVYYGK-LKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~-~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.+.||+|+|+.|--+. +.+|.++|||++.+.....+....+|++++.+++ |+||+.|+++|.++...|||||-|.||+
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence 5789999999998885 5589999999998887777788899999999995 9999999999999999999999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC---cEEEEEeccccccc--C--
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKFAV--D-- 681 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~~kL~DFGla~~~~--~-- 681 (854)
|..+|. +..-+++.++-++..+|+.||.+||.+ ||.|||+||+|||-.... -+||+||.++.-.. .
T Consensus 163 lLshI~----~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~ 235 (463)
T KOG0607|consen 163 LLSHIQ----KRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC 235 (463)
T ss_pred HHHHHH----HhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence 999984 455688899999999999999999999 999999999999987543 58999998874221 1
Q ss_pred --CCcceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCccccccc-------ccccccchHHHHH
Q 003046 682 --GASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEK-------FGANCRNIVQWAK 747 (854)
Q Consensus 682 --~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~-------~~~~~~~l~~~~~ 747 (854)
..+....+.+|+..|||||+.. ...|+.+.|.||+|||||-|++|.+||.+.- .++.++.-..-..
T Consensus 236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF 315 (463)
T KOG0607|consen 236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 315 (463)
T ss_pred CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence 1122223456889999999874 2457889999999999999999999997543 2222221111111
Q ss_pred HhhhcCCcccccCCcccCcCCHH----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQ----SMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~----~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.-+++|.. +++.+ ...+..+++...+..++.+|-++.+|+.|
T Consensus 316 esIQEGkY----------eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 316 ESIQEGKY----------EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred HHHhccCC----------cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 22333321 22222 23345677777788999999999998874
No 361
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-32 Score=276.72 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=199.4
Q ss_pred ccCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhc---hHHHHHHhhhcCCCceeeEeeeee
Q 003046 517 CFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKRE---FTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 517 ~~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~---~~~E~~~l~~l~HpnIv~l~g~~~ 592 (854)
..++.++. +.++||+|.||.|-+++-+ .++.+|+|++++...-.+.+ -..|-++|+..+||.+..|--.|.
T Consensus 164 kvTm~dFd-----fLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ 238 (516)
T KOG0690|consen 164 KVTMEDFD-----FLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ 238 (516)
T ss_pred eeccchhh-----HHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc
Confidence 34555543 5689999999999999876 68999999998765443333 346889999999999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEE
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~D 672 (854)
..+++|+||||+.||.|.-+| ...+.+++.....+..+|..||.|||++ +||+||||.+|.|+|.+|++||+|
T Consensus 239 t~drlCFVMeyanGGeLf~HL----srer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitD 311 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHL----SRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITD 311 (516)
T ss_pred cCceEEEEEEEccCceEeeeh----hhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeee
Confidence 999999999999999998877 3466788888888999999999999998 999999999999999999999999
Q ss_pred ecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc
Q 003046 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES 752 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~ 752 (854)
||+++.-- .....+...+|||.|+|||++....|..++|.|.+|||||||++|+.||....-.....-+. +++
T Consensus 312 FGLCKE~I-~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl------~ed 384 (516)
T KOG0690|consen 312 FGLCKEEI-KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL------MED 384 (516)
T ss_pred cccchhcc-cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH------hhh
Confidence 99987422 12344567889999999999999999999999999999999999999997654221111111 111
Q ss_pred CCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 753 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 753 ~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
-+ ++.....+...|....+..||.+|. .++||.+|
T Consensus 385 ~k------------FPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 385 LK------------FPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred cc------------CCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 11 1222222455677788899999997 46666654
No 362
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=8.2e-31 Score=291.31 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=189.9
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSVL 599 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~~l 599 (854)
.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 18 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 97 (342)
T cd07879 18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYL 97 (342)
T ss_pred EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEE
Confidence 34578999999999999875 68999999986432 12234578899999999999999999998654 34689
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|+||+.. +|.+++ ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 98 v~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 98 VMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred Eeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 9999964 676654 23578888999999999999999998 9999999999999999999999999998754
Q ss_pred cCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-------HHhhh
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KLHIE 751 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-------~~~~~ 751 (854)
... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.... .....
T Consensus 168 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd07879 168 DAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLE 243 (342)
T ss_pred CCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhc
Confidence 321 122357889999999876 468899999999999999999999997644211111111000 00000
Q ss_pred cCCcc-------cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHHH
Q 003046 752 SGDIQ-------GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDAI 804 (854)
Q Consensus 752 ~~~~~-------~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~~~ 804 (854)
..... ......+...+ ......+.+++.+|++.+|++||++.|+++| ++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 244 DKAAKSYIKSLPKYPRKDFSTLF-PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred ccchHHHHhhcCCcccchHHHHh-cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00000 00000000000 0122357799999999999999999999977 66653
No 363
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=4.3e-32 Score=274.97 Aligned_cols=203 Identities=24% Similarity=0.363 Sum_probs=168.0
Q ss_pred HHHhhccccccCcEEEEEEEECC-----CcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeee-cCeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQE-EGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~-----~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~ 598 (854)
.|+....||+|.||.||+|.-++ .+.+|+|+++.... .-.....+|+.+++.++|||++.|..++.. +...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 34456789999999999995432 33789999875532 123457889999999999999999999977 78899
Q ss_pred EEEEecCCCCHHHhhcc-cccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC----CcEEEEEe
Q 003046 599 LVYEFMHNGTLKEHLYG-TLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH----MRAKVSDF 673 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~-~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~----~~~kL~DF 673 (854)
+++||.+. +|.+.++- .....+.++...+..|+.||+.|+.|||++ -|+||||||.||||..+ |.|||+||
T Consensus 105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999986 78877743 223446789999999999999999999999 89999999999999877 89999999
Q ss_pred cccccccCCCcce--eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003046 674 GLSKFAVDGASHV--SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 674 Gla~~~~~~~~~~--~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~ 733 (854)
|+++.+.+.-... ...++-|.+|+|||.+.+ ..|+.+.|||+.|||..||+|-.+.|.+.
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9999876553332 344667999999999987 56899999999999999999998888543
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=3.5e-31 Score=294.32 Aligned_cols=263 Identities=19% Similarity=0.231 Sum_probs=190.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeec------------
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------------ 594 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------------ 594 (854)
+.+.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 7 y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (342)
T cd07854 7 YMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLT 86 (342)
T ss_pred eEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccc
Confidence 445688999999999999876 5889999998766555566788999999999999999999876543
Q ss_pred --CeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEE
Q 003046 595 --GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVS 671 (854)
Q Consensus 595 --~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~ 671 (854)
...++|+||++ ++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+
T Consensus 87 ~~~~~~lv~e~~~-~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 87 ELNSVYIVQEYME-TDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccceEEEEeeccc-ccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 58888773 23578889999999999999999998 9999999999999974 5678999
Q ss_pred EecccccccCCCcce--eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH--
Q 003046 672 DFGLSKFAVDGASHV--SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-- 746 (854)
Q Consensus 672 DFGla~~~~~~~~~~--~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-- 746 (854)
|||+++......... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||......+....+..-.
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999997543322111 122357889999998754 567889999999999999999999997544211111110000
Q ss_pred -----HHhhhcCCcccccCCcccCcCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 747 -----KLHIESGDIQGIIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 -----~~~~~~~~~~~~id~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...........+.........+ .....++.+++.+|++.+|++||++.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000000000000000000000 1122457799999999999999999999876
No 365
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=5.3e-31 Score=278.43 Aligned_cols=236 Identities=29% Similarity=0.360 Sum_probs=190.8
Q ss_pred ccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 534 IGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
||+|+||.||++... +++.+|+|++...... ....+..|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999876 5889999998765322 345788999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeec
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
.+++.. ...+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 999843 33588999999999999999999998 99999999999999999999999999987654322 12233
Q ss_pred ccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 690 VRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
..++..|+|||...+...+.++|+||||+++||+++|+.||..... ..+..... . +.. ..+.
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~---~-~~~----------~~~~ 214 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR----KEIYEKIL---K-DPL----------RFPE 214 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHh---c-CCC----------CCCC
Confidence 4578999999999988889999999999999999999999965431 11111111 1 110 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISE 795 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~e 795 (854)
.....+.+++.+|+..+|++||++.+
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 11345788999999999999999944
No 366
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=265.67 Aligned_cols=247 Identities=24% Similarity=0.374 Sum_probs=191.3
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecC-CccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
...||.|..|.||+++.+ .|..+|||.+... ..+..+.+...+.++.+.+ .|.||+.+|||..+...++.||.|..
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~- 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST- 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence 456999999999999887 5889999998765 3444566777888877775 89999999999999888899998853
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
.+..++... .+.+++.-+-++...+.+||.||.++ ++|+|||+||+|||+|+.|++|+||||++-.+.+...+
T Consensus 176 C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh-- 248 (391)
T KOG0983|consen 176 CAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH-- 248 (391)
T ss_pred HHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeeccccc--
Confidence 455555322 34477777778899999999999998 49999999999999999999999999999776654443
Q ss_pred ecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 688 SIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~---~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
+...|.+.|||||.+.- ..|+.++||||||+.++||.||+.||.+.+. ++ .... .... +....+++...
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t--dF-e~lt---kvln--~ePP~L~~~~g 320 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT--DF-EVLT---KVLN--EEPPLLPGHMG 320 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc--cH-HHHH---HHHh--cCCCCCCcccC
Confidence 34568999999999964 4688999999999999999999999987541 11 1111 1111 11122222211
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
++ ..+.+++..|++.|+.+||...++++|
T Consensus 321 --FS----p~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 321 --FS----PDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --cC----HHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 23 357889999999999999999999887
No 367
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=9.6e-31 Score=290.88 Aligned_cols=258 Identities=21% Similarity=0.278 Sum_probs=189.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecC------eEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------~~~ 598 (854)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.... ..+
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 96 (343)
T cd07880 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFY 96 (343)
T ss_pred eEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEE
Confidence 445678999999999999865 68999999985432 222346778999999999999999999986543 458
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 97 lv~e~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 97 LVMPFM-GTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred EEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 999998 678988774 24588899999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH--------HHHHh
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ--------WAKLH 749 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~--------~~~~~ 749 (854)
..... ....+++.|+|||.+.+ ..++.++|||||||+++++++|+.||...........+.. +....
T Consensus 168 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07880 168 TDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL 243 (343)
T ss_pred cccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 43221 22357889999999876 4588999999999999999999999975432111111110 00000
Q ss_pred hhc------CCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 IES------GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~------~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ..+.......+ ..........+.+++.+|++.+|++||++.+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 244 QSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred cchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000000 00001122357899999999999999999999965
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=9.3e-31 Score=289.12 Aligned_cols=259 Identities=19% Similarity=0.266 Sum_probs=190.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee-cCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-EGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|... +++.||||++.... ....+.+..|++++++++||||+++.+++.. ....++|+||
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~ 91 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTEL 91 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeeh
Confidence 445689999999999999866 78999999876432 2234567889999999999999999998865 5578999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+ +++|.+++. ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 92 ~-~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~- 161 (328)
T cd07856 92 L-GTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQ- 161 (328)
T ss_pred h-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCC-
Confidence 8 568888774 23467778888999999999999998 9999999999999999999999999998754221
Q ss_pred cceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH--------HHHhhhcCC
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW--------AKLHIESGD 754 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~--------~~~~~~~~~ 754 (854)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.++ .........
T Consensus 162 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd07856 162 ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT 238 (328)
T ss_pred ---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence 122347889999998866 56899999999999999999999999654321111111111 100000000
Q ss_pred cccccCCcccCcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..-...-......+. .....+.+++.+|++.+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000011111 123568899999999999999999999876
No 369
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=4.3e-31 Score=292.31 Aligned_cols=262 Identities=21% Similarity=0.265 Sum_probs=188.8
Q ss_pred HhhccccccCcEEEEEEEEC-C--CcEEEEEEEecCC--ccchhchHHHHHHhhhc-CCCceeeEeeeeeec----CeEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-D--GKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE----GRSV 598 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~--~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~----~~~~ 598 (854)
.+.+.||+|+||.||+++.. . +..||+|++.... ......+.+|+++++++ +||||+++++.+... ...+
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 82 (332)
T cd07857 3 ELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELY 82 (332)
T ss_pred eEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEE
Confidence 35678999999999999876 3 6789999986432 22245678899999999 599999999875432 4568
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+++||+. ++|.+.+. ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.
T Consensus 83 ~~~e~~~-~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 83 LYEELME-ADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEeccc-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 8888886 68888874 345688999999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCcc---eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH--------
Q 003046 679 AVDGASH---VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------- 746 (854)
Q Consensus 679 ~~~~~~~---~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-------- 746 (854)
....... ......||..|+|||++.+ ..++.++||||+||++|+|++|+.||...........+....
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 4432211 1123458999999998865 468899999999999999999999997544211111111100
Q ss_pred HHhhhcC------CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 747 KLHIESG------DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 ~~~~~~~------~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....... .....-...+ ..........+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPF-ESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcch-HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 0000000000 00001113468899999999999999999999765
No 370
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=285.78 Aligned_cols=253 Identities=25% Similarity=0.399 Sum_probs=198.9
Q ss_pred HHHHHHHh-hccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 523 IEDATKML-EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 523 i~~~~~~~-~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
+......| ++.||+|.||+||-|+++ +|+.||||++.+. ....+.++.+|++||+.++||.||.+-.-|+..++.+
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervF 639 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVF 639 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEE
Confidence 33333334 689999999999999876 7999999999765 3445678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC---CcEEEEEecc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGL 675 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~~kL~DFGl 675 (854)
+|||-+.| +..+.+.. .+..+|++.....++.||+.||.|||.+ +|+|+||||+|||+... .++||||||.
T Consensus 640 VVMEKl~G-DMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGf 713 (888)
T KOG4236|consen 640 VVMEKLHG-DMLEMILS--SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGF 713 (888)
T ss_pred EEehhhcc-hHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccc
Confidence 99999965 44444432 3467788888888999999999999998 99999999999999754 4799999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
|+.+.. ......+.||+.|+|||++....|...-|+||.||++|--++|..||.... ++-+. +++..+
T Consensus 714 ARiIgE--ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE------dIndQ----IQNAaF 781 (888)
T KOG4236|consen 714 ARIIGE--KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE------DINDQ----IQNAAF 781 (888)
T ss_pred eeecch--hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc------chhHH----hhcccc
Confidence 998754 344566789999999999999999999999999999999999999997543 22221 111111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+..+.-.. +.....++++...++..-.+|-+.++-+.|
T Consensus 782 --MyPp~PW~----eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 782 --MYPPNPWS----EISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred --ccCCCchh----hcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 11122122 223346778888888888888888876654
No 371
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.9e-30 Score=288.70 Aligned_cols=258 Identities=22% Similarity=0.291 Sum_probs=188.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~~ 598 (854)
+.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++... ...+
T Consensus 19 y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 98 (345)
T cd07877 19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 98 (345)
T ss_pred eEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEE
Confidence 334578999999999999864 68899999986432 22345677899999999999999999988643 3467
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
++++++ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 lv~~~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~~ 169 (345)
T cd07877 99 LVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 169 (345)
T ss_pred EEehhc-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEeccccccc
Confidence 888876 778988774 23588899999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH-------Hhh
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-------LHI 750 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~-------~~~ 750 (854)
.... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+..... ..+
T Consensus 170 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T cd07877 170 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 245 (345)
T ss_pred cccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 4322 223457899999999876 5688899999999999999999999965432111111111100 000
Q ss_pred hcCC-------cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGD-------IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~-------~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... +......... .........+.+++.+|++.+|.+||++.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 246 SSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred ccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 0000000000 0000123357899999999999999999999887
No 372
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=9.6e-31 Score=290.89 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=191.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCe------EE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------SV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~------~~ 598 (854)
|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++|||++++++++...+. .+
T Consensus 17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 96 (343)
T cd07851 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY 96 (343)
T ss_pred eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence 345678999999999999886 57899999886431 2233557789999999999999999998866554 89
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 97 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 97 LVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred EEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 999998 5699888842 4688999999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH-------Hhh
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-------LHI 750 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~-------~~~ 750 (854)
.... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.+... ..+
T Consensus 168 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 168 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred cccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence 5332 223357889999999865 4678899999999999999999999975442111111111000 000
Q ss_pred hcCCcccccC---CcccCcC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGDIQGIID---PSLLDEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id---~~l~~~~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........+. ..-...+ .......+.+++.+|++.+|++|||+.||+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000000000 0000000 00123568899999999999999999999876
No 373
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=276.41 Aligned_cols=259 Identities=24% Similarity=0.319 Sum_probs=203.3
Q ss_pred HHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecC-eE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-RS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~ 597 (854)
.+..+...+-+|.||.||+|.|. +.+.|.||.++... .-....+..|..++..+.|||+.++.+++.++. ..
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P 363 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP 363 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence 33344567889999999999765 34567778776442 223456778888999999999999999997654 56
Q ss_pred EEEEEecCCCCHHHhhcc----cccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 598 VLVYEFMHNGTLKEHLYG----TLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~----~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
+.+|.++.-|+|..||.. .....+.+...+...++.|++.|++|||+. ++||.||.++|++||+..++||+|=
T Consensus 364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccc
Confidence 888999999999999962 112345677888899999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCccee-ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003046 674 GLSKFAVDGASHVS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.+++...+.+.+.- .....+..||+||.+....|+.++|||||||+||||+| |+.|+..-+.- .+..+ ++
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf----Em~~y----lk 512 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF----EMEHY----LK 512 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH----HHHHH----Hh
Confidence 99997666555432 33456789999999999999999999999999999999 88998654411 11111 11
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
+| .+-..+..+..++..+..-||+..|++||+.+|++.-|.+.-
T Consensus 513 dG---------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 513 DG---------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred cc---------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 12 111223445667899999999999999999999999998763
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2e-30 Score=272.76 Aligned_cols=220 Identities=21% Similarity=0.176 Sum_probs=174.8
Q ss_pred cCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHHhhcc
Q 003046 537 GGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYG 615 (854)
Q Consensus 537 G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~ 615 (854)
|.||.||+++.. +++.+|+|+++... .+..|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999876 68899999986542 234455555566799999999999999999999999999999998843
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeeccccccc
Q 003046 616 TLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVG 695 (854)
Q Consensus 616 ~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~ 695 (854)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+...... .....++..
T Consensus 79 ----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~ 147 (237)
T cd05576 79 ----FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENM 147 (237)
T ss_pred ----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCcc
Confidence 33588999999999999999999998 9999999999999999999999999987654322 122346778
Q ss_pred ccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHH
Q 003046 696 YLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKI 775 (854)
Q Consensus 696 Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l 775 (854)
|+|||.+.+..++.++||||+||++|||++|+.|+...... .. ......+... ....+
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-------------~~-----~~~~~~~~~~----~~~~~ 205 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-------------IN-----THTTLNIPEW----VSEEA 205 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-------------cc-----cccccCCccc----CCHHH
Confidence 99999998888999999999999999999999887532200 00 0000001111 22457
Q ss_pred HHHHHHccCCCCCCCCCHH
Q 003046 776 EEKALMCVLPHGHMRPSIS 794 (854)
Q Consensus 776 ~~l~~~Cl~~~P~~RPsm~ 794 (854)
.+++.+|++.||++||++.
T Consensus 206 ~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHccCCHHHhcCCC
Confidence 8899999999999999973
No 375
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=8.2e-31 Score=306.17 Aligned_cols=246 Identities=25% Similarity=0.375 Sum_probs=182.6
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeee----------------
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE---------------- 593 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~---------------- 593 (854)
+.||+||||.|||++.+ ||+.+|||++.... ......+.+|+.+|++++|||||+++..+.+
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~ 564 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSE 564 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchh
Confidence 57999999999999988 89999999997653 2334567889999999999999997632100
Q ss_pred --------------------------------------------------------------------------------
Q 003046 594 -------------------------------------------------------------------------------- 593 (854)
Q Consensus 594 -------------------------------------------------------------------------------- 593 (854)
T Consensus 565 ~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~ 644 (1351)
T KOG1035|consen 565 SRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDD 644 (1351)
T ss_pred hhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCc
Confidence
Q ss_pred ---------------c--------CeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCce
Q 003046 594 ---------------E--------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAI 650 (854)
Q Consensus 594 ---------------~--------~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 650 (854)
+ ..+|+-||||+..+|.++++...-.. .....++++.+|+.||+|+|+. ||
T Consensus 645 ~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLaYIH~~---gi 718 (1351)
T KOG1035|consen 645 TSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLAYIHDQ---GI 718 (1351)
T ss_pred chhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHHHHHhC---ce
Confidence 0 12467789998888888775432111 3456788999999999999999 99
Q ss_pred eccCCCCCCeEEcCCCcEEEEEeccccccc------C-----------CCcceeecccccccccCccccccC---cCCCc
Q 003046 651 IHRDLKSSNILLDKHMRAKVSDFGLSKFAV------D-----------GASHVSSIVRGTVGYLDPEYYISQ---QLTDK 710 (854)
Q Consensus 651 vHrDIkp~NILl~~~~~~kL~DFGla~~~~------~-----------~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~ 710 (854)
|||||||.||+++++..|||+|||+|+... + ......+...||.-|+|||++.+. .|+.|
T Consensus 719 IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~K 798 (1351)
T KOG1035|consen 719 IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSK 798 (1351)
T ss_pred eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccch
Confidence 999999999999999999999999997621 0 011123445699999999999764 59999
Q ss_pred chhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCC
Q 003046 711 SDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR 790 (854)
Q Consensus 711 sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R 790 (854)
+|+||+|||++||+.- |.... +.. -+...++.+.+..- ..+....+..-..++.++++.||.+|
T Consensus 799 iDmYSLGIVlFEM~yP---F~TsM-----ERa--~iL~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 799 IDMYSLGIVLFEMLYP---FGTSM-----ERA--SILTNLRKGSIPEP------ADFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred hhhHHHHHHHHHHhcc---CCchH-----HHH--HHHHhcccCCCCCC------cccccccchHHHHHHHHHhcCCCccC
Confidence 9999999999999854 53221 111 11123334444332 12233444456789999999999999
Q ss_pred CCHHHHHHH
Q 003046 791 PSISEVLKD 799 (854)
Q Consensus 791 Psm~eV~~~ 799 (854)
||+.|++..
T Consensus 863 PtA~eLL~s 871 (1351)
T KOG1035|consen 863 PTATELLNS 871 (1351)
T ss_pred CCHHHHhhc
Confidence 999998853
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.6e-30 Score=310.17 Aligned_cols=143 Identities=31% Similarity=0.419 Sum_probs=126.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.++||+|+||.||+|... +++.||||+++.... .....+..|+.++..++||||+++++++......++||||
T Consensus 6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy 85 (669)
T cd05610 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEY 85 (669)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeC
Confidence 345688999999999999887 688999999975432 2235688899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
+.+++|.+++.. ...+++..++.|+.||+.||+|||.. +|+||||||+||||+.++.+||+|||+++
T Consensus 86 ~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 86 LIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999853 34577888899999999999999998 99999999999999999999999999986
No 377
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=6.9e-32 Score=268.43 Aligned_cols=264 Identities=27% Similarity=0.370 Sum_probs=197.4
Q ss_pred ccccCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeee
Q 003046 515 AHCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYC 591 (854)
Q Consensus 515 ~~~~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~ 591 (854)
.+.|+-.++++. ..||.|+||+|+|-.++ .|+..|||+++.... ....++..|.+...+- +.||||+++|.+
T Consensus 58 ~~~F~~~~Lqdl-----g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~ 132 (361)
T KOG1006|consen 58 LHTFTSDNLQDL-----GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL 132 (361)
T ss_pred ccccccchHHHH-----HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence 345555555432 46999999999999887 689999999987654 4456778888765544 789999999999
Q ss_pred eecCeEEEEEEecCCCCHHHhhcc-cccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEE
Q 003046 592 QEEGRSVLVYEFMHNGTLKEHLYG-TLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 592 ~~~~~~~lV~e~~~~gsL~~~L~~-~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL 670 (854)
..++..++.||.|. -||..+-.. .......+++.-.-.|..-...||.||.+. ..|||||+||+|||++..|.+||
T Consensus 133 F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKL 209 (361)
T KOG1006|consen 133 FSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKL 209 (361)
T ss_pred hcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEee
Confidence 99999999999995 465543211 112355678777778888889999999987 48999999999999999999999
Q ss_pred EEecccccccCCCcceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH
Q 003046 671 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL 748 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~ 748 (854)
||||++-.+.+. ...+.-.|...|||||.+.. ..|+.++||||+|+.|+|+.||+.|+.... ++.+.+..
T Consensus 210 CDFGIcGqLv~S--iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~------svfeql~~ 281 (361)
T KOG1006|consen 210 CDFGICGQLVDS--IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD------SVFEQLCQ 281 (361)
T ss_pred ecccchHhHHHH--HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH------HHHHHHHH
Confidence 999998654332 22334468899999999964 358899999999999999999999997654 22332222
Q ss_pred hhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... |+...+. . +.-..+....+...+..|+..|-..||...++.++
T Consensus 282 Vv~-gdpp~l~-~---~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 282 VVI-GDPPILL-F---DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHc-CCCCeec-C---cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 222 2221111 1 11123344568889999999999999999998765
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-31 Score=276.32 Aligned_cols=242 Identities=24% Similarity=0.313 Sum_probs=192.7
Q ss_pred HHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhc---hHHHHHHhhhc-CCCceeeEeeeeeecCeEE
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKRE---FTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~---~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~ 598 (854)
.....+|..+||+|+||.|-+|.-+ +.+.+|||+++++..-...+ -..|-++|... +-|.+++++.+|..-++++
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3344567899999999999999766 45679999998775433332 23466666655 5689999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+.||+|.-++. .-+++.+..+.-+|.+||-||-+||++ +||+||||..|||+|.+|++||+|||+++.
T Consensus 427 FVMEyvnGGDLMyhiQ----Q~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQ----QVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eEEEEecCchhhhHHH----HhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccc
Confidence 9999999999988773 455677888889999999999999999 999999999999999999999999999974
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
-.- ....+.+.+||+.|+|||++...+|+.++|.|||||+||||+.|++||++.+..+..+.+.+.
T Consensus 500 ni~-~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------------- 565 (683)
T KOG0696|consen 500 NIF-DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------------- 565 (683)
T ss_pred ccc-CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc-------------
Confidence 222 233455678999999999999999999999999999999999999999987744443333221
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP 791 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 791 (854)
. -.++....++...+...-+...|.+|.
T Consensus 566 ---n--vsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 566 ---N--VSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ---c--CcCcccccHHHHHHHHHHhhcCCcccc
Confidence 1 123333344566777777888888886
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=288.35 Aligned_cols=238 Identities=21% Similarity=0.326 Sum_probs=189.9
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+...+|.|+|+.|-++.+. +++..+||++... ..+..+|+.++... +||||+++.+.+.+..+.++|||.+
T Consensus 323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred hhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 4556678999999999999766 6888999998754 33445677666655 7999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE-cCCCcEEEEEecccccccCCC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL-DKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl-~~~~~~kL~DFGla~~~~~~~ 683 (854)
.++-+.+.+... +.....+..|+.+|+.|+.|||++ |+||||+||+|||+ ++.++++|+|||.++.....
T Consensus 399 ~g~ell~ri~~~-----~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 399 DGGELLRRIRSK-----PEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred cccHHHHHHHhc-----chhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 999887777432 122256667999999999999998 99999999999999 58899999999999865443
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
....+-|..|.|||+.....|++++|+||||++||+||+|+.||.....+ .++ ...+..+..
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei----~~~i~~~~~-------- 531 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEI----HTRIQMPKF-------- 531 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHH----HHhhcCCcc--------
Confidence 22234588999999999999999999999999999999999999765422 111 122222222
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+........+|+.+|++.||.+||+|.++..|
T Consensus 532 ----s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 532 ----SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ----ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 23334467899999999999999999999876
No 380
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-30 Score=262.19 Aligned_cols=243 Identities=24% Similarity=0.278 Sum_probs=192.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeee----cCeEEEEEEec
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE----EGRSVLVYEFM 604 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~----~~~~~lV~e~~ 604 (854)
.++||-|-.|.|-.+.++ +++..|+|++.. .....+|+++.-.. .|||||.+++++.. ...+++|||.|
T Consensus 67 ~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m 141 (400)
T KOG0604|consen 67 WQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM 141 (400)
T ss_pred hhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence 478999999999999876 688999999853 23456788875555 69999999998853 45788999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEEEEecccccccC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL~DFGla~~~~~ 681 (854)
+||.|...+.+. ..+.+.+.++..|+.||+.|+.|||+. .|.||||||+|+|... |..+||+|||+|+....
T Consensus 142 eGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~ 216 (400)
T KOG0604|consen 142 EGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE 216 (400)
T ss_pred cchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccCC
Confidence 999999988653 345688999999999999999999998 9999999999999974 45799999999986543
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.....+.+-|+.|.|||++-..+|+...|+||+||++|-|++|.+||-.... ..+.--.+..+..|..
T Consensus 217 --~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg----~aispgMk~rI~~gqy------ 284 (400)
T KOG0604|consen 217 --PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG----LAISPGMKRRIRTGQY------ 284 (400)
T ss_pred --CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC----ccCChhHHhHhhccCc------
Confidence 2233445679999999999999999999999999999999999999965441 1222222333333321
Q ss_pred cccCcCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYD----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+++ ....+...+++...+..+|++|-|+.|++.|
T Consensus 285 ----~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 285 ----EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ----cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 122 2334567789999999999999999999876
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.7e-32 Score=266.21 Aligned_cols=262 Identities=20% Similarity=0.300 Sum_probs=191.7
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeee--------cCeEE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--------EGRSV 598 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--------~~~~~ 598 (854)
-..+||+|.||.||+|+.+ .|+.||+|++--. ...-.....+|+.+|..++|+|++.+++.|.. ....+
T Consensus 21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence 3468999999999999876 5778899765322 22223456789999999999999999998843 33579
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||.+|+. +|...|... ..+++..++.+++.++..||.|+|+. .|+|||+||.|+||+.++.+||+|||+++.
T Consensus 101 lVf~~ceh-DLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 101 LVFDFCEH-DLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeHHHhhh-hHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 99999986 777777432 35788889999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCc---ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH--------HH
Q 003046 679 AVDGAS---HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ--------WA 746 (854)
Q Consensus 679 ~~~~~~---~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~--------~~ 746 (854)
+..... ...+..+-|.+|++||.+.+ +.++.+.|||+.|||+.||+||.+.+.+....... .++. -+
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql-~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQL-HLISQLCGSITKEV 252 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHH-HHHHHHhccCCccc
Confidence 543221 22234456999999999987 67999999999999999999999988765521111 1111 11
Q ss_pred HHhhhcCCccccc--CCcccCcCC--HHHHH------HHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 747 KLHIESGDIQGII--DPSLLDEYD--IQSMW------KIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 ~~~~~~~~~~~~i--d~~l~~~~~--~~~~~------~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+..+.+-.+...+ .|--.+.+. .+..+ ..++|+..++..||.+|+++++++.|
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1111111122222 110011111 11122 56789999999999999999998866
No 382
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-30 Score=241.98 Aligned_cols=258 Identities=20% Similarity=0.278 Sum_probs=190.6
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
-++||+|.||+|++|+.. +++.||+|.++-+. ........+|+-+|+.++|+|||++++....++.+-+|+|||..
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq- 85 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-
Confidence 368999999999999866 57889999987543 23345678999999999999999999999999999999999964
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|..+... -.+.++......++.|+++||.++|++ .+.|||+||.|.||+.+|+.|++|||+++-+.-.....+
T Consensus 86 dlkkyfds---lng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 86 DLKKYFDS---LNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred HHHHHHHh---cCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 77776643 245678888899999999999999998 999999999999999999999999999986654433332
Q ss_pred ecccccccccCccccccCc-CCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHH--hhhcCCc---ccccC
Q 003046 688 SIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKL--HIESGDI---QGIID 760 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~-~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~--~~~~~~~---~~~id 760 (854)
...-|.+|.+|.++.+.+ |+...|+||.||++.|+.. |++.|.+.+.. .++.+.++. ...++.. ...-|
T Consensus 160 -aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd---dqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 160 -AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD---DQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred -ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH---HHHHHHHHHhCCCccccCCccccCCC
Confidence 334699999999998754 7888999999999999987 66666654422 122222221 1112111 11122
Q ss_pred CcccCcCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDI---------QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~---------~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
-.....++. .....=.++....+.-+|.+|.++++.+++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 222222221 111123466667777789999998887765
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-30 Score=290.92 Aligned_cols=250 Identities=25% Similarity=0.376 Sum_probs=203.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeee-----cCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE-----EGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~-----~~~~~lV 600 (854)
..|.+.||+|.+|.||+++.. +++.+|||++.... ....+.+.|.++|+.. +|||++.++|++.. ++.++||
T Consensus 21 ~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 21 FEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred cEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence 346789999999999999865 68889999986543 4466788899999887 69999999999853 5689999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
||||.+||..|++.+.. +.++.|..+.-|+.+++.||.|||.. .++|||||-.|||++.++.|||+|||.+....
T Consensus 100 MEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 100 MEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred eeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 99999999999998765 78899999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCcceeecccccccccCccccccC-----cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQ-----QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
.. .....+..||+.|||||++... .|+.++|+||+|++..||--|.+|+-++..- .+...+.
T Consensus 175 sT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm--------raLF~Ip---- 241 (953)
T KOG0587|consen 175 ST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM--------RALFLIP---- 241 (953)
T ss_pred cc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh--------hhhccCC----
Confidence 32 3344556799999999999643 4677899999999999999999998765411 0011111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
-.|...-..+..-.+++.+.+..|+..|-++||++.++++|
T Consensus 242 ---RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 242 ---RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11222222234556689999999999999999999998865
No 384
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-31 Score=304.62 Aligned_cols=252 Identities=23% Similarity=0.270 Sum_probs=199.6
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC---CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
..+.+.++||+|+||.|...+++ .++.+|+|++.+. .......|.+|-.+|.....+-|+.++-.|.++.++|+||
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVM 154 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVM 154 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEE
Confidence 34556789999999999999987 5788999999763 2334566889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
|||+||+|-.++. +..++++.-+..++..|..||.-||+. |+|||||||+|||||..|++||+|||.+-.+..
T Consensus 155 dY~pGGDlltLlS----k~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 155 DYMPGGDLLTLLS----KFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred ecccCchHHHHHh----hcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 9999999999884 334788888889999999999999998 999999999999999999999999998876665
Q ss_pred CCcceeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 682 GASHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
.....+...+|||.|++||++.. +.|+..+|.||+||++|||+.|..||.....-+.+..|... ....
T Consensus 228 dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h-------k~~l 300 (1317)
T KOG0612|consen 228 DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH-------KESL 300 (1317)
T ss_pred CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch-------hhhc
Confidence 55556666789999999999863 56889999999999999999999999876544333333322 1000
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS---ISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs---m~eV~~~ 799 (854)
..- ...+......+||..-+. +|+.|-. +.++..|
T Consensus 301 ~FP-------~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 301 SFP-------DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred CCC-------cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 000 012233455666666444 4555666 8888776
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3e-30 Score=271.34 Aligned_cols=260 Identities=24% Similarity=0.330 Sum_probs=198.4
Q ss_pred HHHHHHHhhccccccCcEEEEEEEE-CCCcEEEEEEEecCCccc-------hhchHHHHHHhhhcCCCceeeEeeeeee-
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQG-------KREFTNEVTLLSRIHHRNLVQFLGYCQE- 593 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~-------~~~~~~E~~~l~~l~HpnIv~l~g~~~~- 593 (854)
....+|.+.+.||+|+|+.||+|.. ...+.||||+-..+..+. .+...+|..|.+.+.||.||++++++.-
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 3455677789999999999999964 467889999875442221 2345689999999999999999999964
Q ss_pred cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEE
Q 003046 594 EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKV 670 (854)
Q Consensus 594 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL 670 (854)
.+..|-|.|||+|.+|+-+|. ..+.+++.++..|+.||..||.||.+. .++|||-||||.|||+-. .|.+||
T Consensus 540 tdsFCTVLEYceGNDLDFYLK----QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLK----QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred cccceeeeeecCCCchhHHHH----hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEe
Confidence 456789999999999998884 456688999999999999999999986 568999999999999954 488999
Q ss_pred EEecccccccCCCcc------eeecccccccccCccccccC----cCCCcchhhhHHHHHHHHHhCCccccccccccccc
Q 003046 671 SDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQ----QLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 740 (854)
Q Consensus 671 ~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~----~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~ 740 (854)
.|||+++.+.+.... .+....||.+|++||.+.-+ +++.|+||||.|||+|+++.|+.||..... .+
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs---QQ 691 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS---QQ 691 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh---HH
Confidence 999999987654322 33456799999999998643 578899999999999999999999976441 22
Q ss_pred chHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 741 NIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 741 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.+.. .+...-.-.+ ........+...++.+|++..-++|....++..+
T Consensus 692 dILqeN-------TIlkAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 692 DILQEN-------TILKATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred HHHhhh-------chhcceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 333321 1111111001 0112223456788999999999999888777654
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.7e-29 Score=264.22 Aligned_cols=239 Identities=27% Similarity=0.423 Sum_probs=192.8
Q ss_pred CcEEEEEEEEC-CCcEEEEEEEecCCccc-hhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHHhhcc
Q 003046 538 GFGVVYYGKLK-DGKEIAVKVLTSNSYQG-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYG 615 (854)
Q Consensus 538 ~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~ 615 (854)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 48999999997665444 67899999999999999999999999999999999999999999998853
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeeccccccc
Q 003046 616 TLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVG 695 (854)
Q Consensus 616 ~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~ 695 (854)
. ..+++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||.+....... ......++..
T Consensus 81 ~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~ 151 (244)
T smart00220 81 R----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE 151 (244)
T ss_pred c----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence 2 2278889999999999999999998 99999999999999999999999999997654432 2234458889
Q ss_pred ccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHH
Q 003046 696 YLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKI 775 (854)
Q Consensus 696 Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l 775 (854)
|++||......++.++||||||++++++++|..||.... ....+.++.. .+.... . .........+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~---~~~~~~~~~~----~~~~~~-~------~~~~~~~~~~ 217 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD---QLLELFKKIG----KPKPPF-P------PPEWKISPEA 217 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHh----ccCCCC-c------cccccCCHHH
Confidence 999999998889999999999999999999999986532 1112222211 111100 0 0000023468
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 003046 776 EEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 776 ~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+++.+|+..+|++||++.+++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhhC
Confidence 899999999999999999999873
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=2.6e-29 Score=294.48 Aligned_cols=259 Identities=24% Similarity=0.269 Sum_probs=167.3
Q ss_pred HHhhccccccCcEEEEEEEEC-C----CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeee------eeecCe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-D----GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGY------CQEEGR 596 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~----~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~------~~~~~~ 596 (854)
+.+.+.||+|+||.||+|++. + +..||||++..... .+....| .+....+.++..++.. +..+..
T Consensus 134 y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 134 FVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred eEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCc
Confidence 446789999999999999886 4 68999998753221 1111111 1122222223222221 245667
Q ss_pred EEEEEEecCCCCHHHhhccccc----------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCe
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLT----------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 660 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~----------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NI 660 (854)
.++|+||+.+++|.+++..... .........+..++.|++.||+|||+. +|+||||||+||
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NI 286 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQNI 286 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHE
Confidence 8999999999999998853210 011112334567999999999999998 999999999999
Q ss_pred EEcC-CCcEEEEEecccccccCCCcceeecccccccccCccccccC----------------------cCCCcchhhhHH
Q 003046 661 LLDK-HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ----------------------QLTDKSDVYSFG 717 (854)
Q Consensus 661 Ll~~-~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------------------~~s~~sDVwS~G 717 (854)
|++. ++.+||+|||+|+..............+++.|+|||.+... .+..++||||||
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlG 366 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAG 366 (566)
T ss_pred EEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHH
Confidence 9986 58999999999986554444444556789999999965322 234567999999
Q ss_pred HHHHHHHhCCcccccccc------cccccchHHHHHHhhhcCCcccccCCcccCcCC--HHHHHHHHHHHHHccCCCCCC
Q 003046 718 VILLELISGQEAISNEKF------GANCRNIVQWAKLHIESGDIQGIIDPSLLDEYD--IQSMWKIEEKALMCVLPHGHM 789 (854)
Q Consensus 718 vvl~elltG~~pf~~~~~------~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~--~~~~~~l~~l~~~Cl~~~P~~ 789 (854)
|++|||+++..+++.... ......+..|....... ..+.+...++ ........+|+.+|++.||++
T Consensus 367 viL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 367 LIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred HHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 999999998766543210 00011122232211100 0000000000 001123458999999999999
Q ss_pred CCCHHHHHHH
Q 003046 790 RPSISEVLKD 799 (854)
Q Consensus 790 RPsm~eV~~~ 799 (854)
|||+.|+++|
T Consensus 441 R~ta~e~L~H 450 (566)
T PLN03225 441 RISAKAALAH 450 (566)
T ss_pred CCCHHHHhCC
Confidence 9999999987
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=6.2e-29 Score=284.26 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=178.1
Q ss_pred HHhhccccccCcEEEEEEEE-----------------CCCcEEEEEEEecCCccch--------------hchHHHHHHh
Q 003046 528 KMLEKKIGSGGFGVVYYGKL-----------------KDGKEIAVKVLTSNSYQGK--------------REFTNEVTLL 576 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~-----------------~~~~~vAvK~l~~~~~~~~--------------~~~~~E~~~l 576 (854)
+.+.++||+|+||+||+|.+ ..++.||||++........ +....|+.++
T Consensus 147 F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l 226 (507)
T PLN03224 147 FQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMC 226 (507)
T ss_pred ceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHH
Confidence 44578999999999999964 2356799999865432222 2234477777
Q ss_pred hhcCCCce-----eeEeeeeee--------cCeEEEEEEecCCCCHHHhhccccc--------------------ccccc
Q 003046 577 SRIHHRNL-----VQFLGYCQE--------EGRSVLVYEFMHNGTLKEHLYGTLT--------------------HEQRI 623 (854)
Q Consensus 577 ~~l~HpnI-----v~l~g~~~~--------~~~~~lV~e~~~~gsL~~~L~~~~~--------------------~~~~l 623 (854)
.+++|.++ ++++++|.. .+..+|||||+++|+|.++++.... ....+
T Consensus 227 ~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~ 306 (507)
T PLN03224 227 AKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKR 306 (507)
T ss_pred HHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccC
Confidence 77876654 677887753 3568999999999999999864211 11235
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccc
Q 003046 624 NWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYI 703 (854)
Q Consensus 624 ~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 703 (854)
+|..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..............+|+.|+|||.+.
T Consensus 307 ~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 307 DINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 6778889999999999999998 9999999999999999999999999999754433222222233588999999886
Q ss_pred cCcC----------------------CCcchhhhHHHHHHHHHhCCc-ccccccc-c----ccccchHHHHHHhhhcCCc
Q 003046 704 SQQL----------------------TDKSDVYSFGVILLELISGQE-AISNEKF-G----ANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 704 ~~~~----------------------s~~sDVwS~Gvvl~elltG~~-pf~~~~~-~----~~~~~l~~~~~~~~~~~~~ 755 (854)
.... ..+.||||+||+++||++|.. |+..... . .....+..|.. .....
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~~~~- 460 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YKGQK- 460 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hcccC-
Confidence 4321 124699999999999999875 6643221 0 00112222321 11111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHG---HMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P---~~RPsm~eV~~~ 799 (854)
++-...+. ......+++.+++..+| .+|+|+.|+++|
T Consensus 461 ---~~~~~~d~----~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 461 ---YDFSLLDR----NKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ---CCcccccc----cChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 11111111 22356788888888765 689999999986
No 389
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-29 Score=243.39 Aligned_cols=199 Identities=27% Similarity=0.399 Sum_probs=168.5
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecC-CccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
...||+|++|.|-+-++. +|+..|+|.+... ..+..+...+|+.+..+. .+|.+|.++|.....+..++.||.|. .
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-T 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-h
Confidence 467999999999888775 7899999999765 234456677788776554 68999999999999999999999995 4
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
||..+-...+..+..+++.-.-+|+..+.+||.|||++ ..++|||+||+|||++.+|++|+||||++-.+.+.. ..
T Consensus 130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi--Ak 205 (282)
T KOG0984|consen 130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI--AK 205 (282)
T ss_pred hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhh--HH
Confidence 88887776677888999999999999999999999998 589999999999999999999999999997665432 22
Q ss_pred ecccccccccCcccccc----CcCCCcchhhhHHHHHHHHHhCCccccccc
Q 003046 688 SIVRGTVGYLDPEYYIS----QQLTDKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~ 734 (854)
+...|...|||||.+.. ..|+-++||||+|+.+.||.+++.||+...
T Consensus 206 t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 206 TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 33458899999999863 478999999999999999999999997644
No 390
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-30 Score=267.90 Aligned_cols=272 Identities=20% Similarity=0.258 Sum_probs=204.7
Q ss_pred ccCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCC--C----ceeeEee
Q 003046 517 CFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH--R----NLVQFLG 589 (854)
Q Consensus 517 ~~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H--p----nIv~l~g 589 (854)
.+..+|....+|.+...+|+|.||.|-.+... .+..||||+++.... -.+...-|+++|+++.+ | -++.+.+
T Consensus 80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~ 158 (415)
T KOG0671|consen 80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRD 158 (415)
T ss_pred EEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence 35667777888888999999999999999765 478999999875432 23455679999999942 2 3677888
Q ss_pred eeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc------
Q 003046 590 YCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD------ 663 (854)
Q Consensus 590 ~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~------ 663 (854)
||.-.++.|+|+|.+ |-|+.++|... ....++..++..|+.|+++++++||+. +++|-||||+|||+.
T Consensus 159 wFdyrghiCivfell-G~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~ 232 (415)
T KOG0671|consen 159 WFDYRGHICIVFELL-GLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFK 232 (415)
T ss_pred hhhccCceEEEEecc-ChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEE
Confidence 999999999999987 55999999643 456688889999999999999999998 999999999999983
Q ss_pred --------------CCCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcc
Q 003046 664 --------------KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEA 729 (854)
Q Consensus 664 --------------~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~p 729 (854)
.+..+||+|||.|+...... ..+..|..|+|||++.+-.++..+||||+||||.|+.+|...
T Consensus 233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred EeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeecccee
Confidence 13468999999998654332 345579999999999999999999999999999999999998
Q ss_pred cccccccc-----------cccchHHHH--HHhhhcCCcc-----------cccCCcc----cCcCCHHHHHHHHHHHHH
Q 003046 730 ISNEKFGA-----------NCRNIVQWA--KLHIESGDIQ-----------GIIDPSL----LDEYDIQSMWKIEEKALM 781 (854)
Q Consensus 730 f~~~~~~~-----------~~~~l~~~~--~~~~~~~~~~-----------~~id~~l----~~~~~~~~~~~l~~l~~~ 781 (854)
|.....-+ ....++... ......+.+. .+.++.. .......+..++.+|+..
T Consensus 309 FqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~ 388 (415)
T KOG0671|consen 309 FQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR 388 (415)
T ss_pred cccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence 86533111 111122111 1111112111 0111110 011234566789999999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 003046 782 CVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 782 Cl~~~P~~RPsm~eV~~~ 799 (854)
++..||.+|+|+.|.++|
T Consensus 389 mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 389 MLEFDPARRITLREALSH 406 (415)
T ss_pred HHccCccccccHHHHhcC
Confidence 999999999999999875
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=271.79 Aligned_cols=244 Identities=22% Similarity=0.281 Sum_probs=198.8
Q ss_pred hccccccCcEEEEEEEECCCc-EEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 531 EKKIGSGGFGVVYYGKLKDGK-EIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~-~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
...||-|+||.|=+.+.+... ..|+|++++... ...+....|-.+|..++.|.||+++--|.+....|+.||-|-|
T Consensus 425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG 504 (732)
T KOG0614|consen 425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG 504 (732)
T ss_pred hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence 356999999999999887433 378898876533 2344567799999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|.|...|+ +.+.++..+...++..+.+|++|||++ +||+|||||+|++++.+|-+||.|||+|+....+ ..
T Consensus 505 GElWTiLr----dRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g--~K 575 (732)
T KOG0614|consen 505 GELWTILR----DRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG--RK 575 (732)
T ss_pred chhhhhhh----hcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC--Cc
Confidence 99999985 456788888888999999999999999 9999999999999999999999999999977654 34
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
+.+.+||+.|.|||++.....+.++|.||+|+++|||++|.+||.+.+.-..+..+..-+.. -.
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----------------i~ 639 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----------------IE 639 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh----------------hh
Confidence 55678999999999999999999999999999999999999999876522222111111100 12
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
++....+...+|+.+.++.+|.+|-. +.+|-+|
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 23344456778888889999999985 6677666
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=285.81 Aligned_cols=244 Identities=27% Similarity=0.384 Sum_probs=187.9
Q ss_pred hccccccCcE-EEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 531 EKKIGSGGFG-VVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 531 ~~~iG~G~fg-~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.+.+|.|+.| .||+|... |+.||||++-.. ......+|++.|+.- .|||||++++.-.+++..|+..|.|. .+
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~s 588 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CS 588 (903)
T ss_pred HHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hh
Confidence 4678999998 67999986 899999987533 234567899999988 69999999999999999999999995 59
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---C--CcEEEEEecccccccCCC
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---H--MRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~--~~~kL~DFGla~~~~~~~ 683 (854)
|.+++.....+.....-...+.+..|+++||+|||+. +||||||||.||||+. + ..++|+|||+++....+.
T Consensus 589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 9999965311111112244567889999999999997 9999999999999976 2 579999999999776665
Q ss_pred ccee--ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhC-CcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 684 SHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISG-QEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 684 ~~~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG-~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.... ....||-||+|||++....-+.++||+|+|||+|+.++| .+||.+.-. ...+|+.- +..+..
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~------~~~L~~--- 734 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTG------NYTLVH--- 734 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcC------ccceee---
Confidence 4433 456799999999999988888899999999999999996 899975431 11122210 000000
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.. ..++ +..+|+.+|++++|..||++.+|+.|
T Consensus 735 --L~~--~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 735 --LEP--LPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred --ecc--CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 011 1111 67899999999999999999999866
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.2e-30 Score=255.86 Aligned_cols=264 Identities=22% Similarity=0.281 Sum_probs=193.8
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecC-----eEEEEEE
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-----RSVLVYE 602 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-----~~~lV~e 602 (854)
++.||.|+||.||..+.. +|+.||.|++... .....+.+.+|+.+|...+|.|++..+++..... +.+++.|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 467999999999999765 7999999988643 2234566788999999999999999888765443 4567777
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
.|.. +|...+ ...+.++...+..+..||++||.|||+. +|.||||||.|.|++.+...||||||+|+.....
T Consensus 138 LmQS-DLHKII----VSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 138 LMQS-DLHKII----VSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHh-hhhhee----ccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 7743 555554 4567788888889999999999999998 9999999999999999999999999999976665
Q ss_pred CcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCccccccccc---------------ccccchHHHH
Q 003046 683 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFG---------------ANCRNIVQWA 746 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~---------------~~~~~l~~~~ 746 (854)
....++...-|..|+|||++.+ +.|+.+.||||.||++.|++..+..|.....- +..+...+.+
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 5555666667999999999987 57999999999999999999988887643311 1111222222
Q ss_pred HHhhhcCCcccccCCcccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 747 KLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 747 ~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
+..+-.+....---+.+..- .......+...+.+.++..||..|.+..+.+.++..
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 32222221111000111000 011122345677788899999999999998887653
No 394
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=3.8e-28 Score=265.21 Aligned_cols=208 Identities=25% Similarity=0.368 Sum_probs=174.6
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||-|+||.|.+++-. +...+|+|.+++.+.- .....+.|-.||.....+-||+|+-.|.+++.+|+||+|++||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG 714 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 714 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence 56999999999999644 4667899998765432 2344678999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc---------
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF--------- 678 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~--------- 678 (854)
++..+|.. -+-+.+..+..++.+++.|+++.|.. |+|||||||+|||||.+|++||.||||+.-
T Consensus 715 DmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 715 DMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred cHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 99998843 34466777778899999999999998 999999999999999999999999999841
Q ss_pred ccCCCcce---------------------------------eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh
Q 003046 679 AVDGASHV---------------------------------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS 725 (854)
Q Consensus 679 ~~~~~~~~---------------------------------~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt 725 (854)
+..+ .|. ....+||+.|+|||++....++..+|.||.|||||||+.
T Consensus 788 Yq~g-dH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 788 YQEG-DHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred ccCC-CccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 1111 110 112349999999999999999999999999999999999
Q ss_pred CCcccccccccccccchHHHHH
Q 003046 726 GQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 726 G~~pf~~~~~~~~~~~l~~~~~ 747 (854)
|+.||-.....+....++.|-.
T Consensus 867 g~~pf~~~tp~~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVINWRN 888 (1034)
T ss_pred CCCCccCCCCCcceeeeeehhh
Confidence 9999998887777778888844
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.3e-28 Score=249.35 Aligned_cols=244 Identities=22% Similarity=0.286 Sum_probs=190.6
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccc---hhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEec
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG---KREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~---~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.++||+|+|+.|-.++++ +.+.+|+|++++..... ..-...|-.+..+. +||.+|-++.+|..+.++++|.||+
T Consensus 254 ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv 333 (593)
T KOG0695|consen 254 LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYV 333 (593)
T ss_pred eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEe
Confidence 4678999999999999876 57789999998653322 22344555555554 7999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+||+|.-++ +..+++++..+..+..+|..||.|||++ |||+||+|..|||+|..|.+||.|+|+++.-.. ..
T Consensus 334 ~ggdlmfhm----qrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~-~g 405 (593)
T KOG0695|consen 334 NGGDLMFHM----QRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG-PG 405 (593)
T ss_pred cCcceeeeh----hhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCC-CC
Confidence 999997666 4567799999999999999999999999 999999999999999999999999999874322 33
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
..+.+.+||+.|+|||++.+..|...+|.|++||+|+||+.|+.||+-.......++--++....+-+..+ +
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--------r 477 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--------R 477 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--------c
Confidence 45567789999999999999999999999999999999999999997544333333333443333322221 1
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRP 791 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP 791 (854)
- +..-..+...+...-+..||.+|.
T Consensus 478 i--prslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 478 I--PRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred c--cceeehhhHHHHHHhhcCCcHHhc
Confidence 0 111122345667778899999886
No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=256.30 Aligned_cols=277 Identities=21% Similarity=0.345 Sum_probs=205.5
Q ss_pred ccccccCHHHHHH-HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-----C---C
Q 003046 513 EAAHCFTLSDIED-ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----H---R 582 (854)
Q Consensus 513 ~~~~~~~~~~i~~-~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----H---p 582 (854)
...|....+|... .+|.+.++||-|.|++||++... ..+.||+|+.+... .-.+....||++|++++ | .
T Consensus 64 GGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~ 142 (590)
T KOG1290|consen 64 GGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKK 142 (590)
T ss_pred CCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 3456667777776 88888999999999999999765 57789999987543 23456778999999994 2 4
Q ss_pred ceeeEeeeeee----cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCC
Q 003046 583 NLVQFLGYCQE----EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 658 (854)
Q Consensus 583 nIv~l~g~~~~----~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~ 658 (854)
.||+|+++|.. +.+.|+|+|+. |-+|..+|... ..+.++...+.+|+.||+.||.|||++| ||||-||||+
T Consensus 143 ~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPE 217 (590)
T KOG1290|consen 143 CVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPE 217 (590)
T ss_pred eeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcc
Confidence 79999999964 45899999988 45777777432 4566888999999999999999999998 9999999999
Q ss_pred CeEEcC--------------------------------------------------------------------------
Q 003046 659 NILLDK-------------------------------------------------------------------------- 664 (854)
Q Consensus 659 NILl~~-------------------------------------------------------------------------- 664 (854)
|||+..
T Consensus 218 NvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~ 297 (590)
T KOG1290|consen 218 NVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEE 297 (590)
T ss_pred eeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccc
Confidence 999910
Q ss_pred --------------------------------------------------------------------------------
Q 003046 665 -------------------------------------------------------------------------------- 664 (854)
Q Consensus 665 -------------------------------------------------------------------------------- 664 (854)
T Consensus 298 ~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n 377 (590)
T KOG1290|consen 298 PNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASN 377 (590)
T ss_pred ccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccc
Confidence
Q ss_pred ------------CCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccc
Q 003046 665 ------------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 732 (854)
Q Consensus 665 ------------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~ 732 (854)
+.++||+|||-|+.... + .+.-..|..|+|||++.+..|+..+||||++|+++||.||...|+.
T Consensus 378 ~~v~p~~~~~~~di~vKIaDlGNACW~~k---h-FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFeP 453 (590)
T KOG1290|consen 378 PLVNPDIPLPECDIRVKIADLGNACWVHK---H-FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEP 453 (590)
T ss_pred cccCCCCCCCccceeEEEeeccchhhhhh---h-hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecC
Confidence 01256667776654321 1 1222358899999999999999999999999999999999988864
Q ss_pred cc---ccccccchHHHHHH-------hhhc-----------CCcccccCCcc-------cC--cCCHHHHHHHHHHHHHc
Q 003046 733 EK---FGANCRNIVQWAKL-------HIES-----------GDIQGIIDPSL-------LD--EYDIQSMWKIEEKALMC 782 (854)
Q Consensus 733 ~~---~~~~~~~l~~~~~~-------~~~~-----------~~~~~~id~~l-------~~--~~~~~~~~~l~~l~~~C 782 (854)
.. ...+..+|...+.. .... |++..+-.-.. .. +++.++..++.+++.-|
T Consensus 454 hsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~Pm 533 (590)
T KOG1290|consen 454 HSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPM 533 (590)
T ss_pred CCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 33 22233333322211 1111 22222111111 11 34678889999999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 003046 783 VLPHGHMRPSISEVLKD 799 (854)
Q Consensus 783 l~~~P~~RPsm~eV~~~ 799 (854)
++.+|++|||+.+.++|
T Consensus 534 Lef~PeKR~tA~~cl~h 550 (590)
T KOG1290|consen 534 LEFDPEKRPTAAQCLKH 550 (590)
T ss_pred HhcCccccccHHHHhcC
Confidence 99999999999999876
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.9e-26 Score=234.80 Aligned_cols=211 Identities=36% Similarity=0.619 Sum_probs=182.8
Q ss_pred ccccCcEEEEEEEECC-CcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHH
Q 003046 534 IGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKE 611 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~ 611 (854)
||+|.+|.||++.... ++.+++|++...... ....+.+|++.++.++|++++++++++......++++|++.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999874 899999998755432 34678999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEecccccccCCCcceeecc
Q 003046 612 HLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVSSIV 690 (854)
Q Consensus 612 ~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~ 690 (854)
++... ...+++..+..++.+++++|.+||+. +++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus 81 ~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~ 153 (215)
T cd00180 81 LLKEN---EGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTI 153 (215)
T ss_pred HHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcc
Confidence 98532 14578889999999999999999998 9999999999999999 89999999999876543321 12234
Q ss_pred cccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCH
Q 003046 691 RGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDI 769 (854)
Q Consensus 691 ~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 769 (854)
.+...|++||..... ..+.+.|+|++|+++++|
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 578899999999887 888999999999999999
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 770 QSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 770 ~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
..+.+++..|++.+|++||++.++++++
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3578899999999999999999998764
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=1.3e-26 Score=226.00 Aligned_cols=256 Identities=20% Similarity=0.327 Sum_probs=193.8
Q ss_pred HHHhhccccccCcEEEEEEEE-CCCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeeec--CeEEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEE--GRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~--~~~~lV~e 602 (854)
.|.+.+++|+|.|+.|+.|.. .+.+.++||+++.. ..+.+.+|+.+|+.+. ||||++|++...+. ....||+|
T Consensus 39 dYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 39 DYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred hHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 466788999999999999974 46889999999743 3567899999999997 99999999998764 45689999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEecccccccC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVD 681 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~~~ 681 (854)
|+.+.+....- ..+....+..++.+++.||.|+|+. ||+|||+||+|++||.. -..+|+|+|+|.+..+
T Consensus 116 ~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 116 YVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 99987765533 3466677788999999999999998 99999999999999965 5799999999987765
Q ss_pred CCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc------CC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES------GD 754 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~------~~ 754 (854)
+... .....+..|..||.+.. ..|+..-|+|||||++..|+..+.||-... +...+++..++-.-.+ ..
T Consensus 186 ~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~--dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 186 GKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH--DNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred Ccee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCC--CCHHHHHHHHHHhChHHHHHHHHH
Confidence 4332 23346788999999875 567888899999999999999999985433 2233444433321100 00
Q ss_pred cccccCCcccC---cCC-------------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLD---EYD-------------IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~---~~~-------------~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..-.+||.+.+ ..+ .-...+.++++...+..|-.+|||++|.+.|
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 11113333221 100 1112567899999999999999999999887
No 399
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=8.1e-27 Score=238.64 Aligned_cols=249 Identities=25% Similarity=0.336 Sum_probs=187.1
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecC------eEEEEEE
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSVLVYE 602 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------~~~lV~e 602 (854)
..+|.|.- .|..|... .++.||+|++... .....+...+|..++..+.|+||++++.++.... ..++|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 45777877 56555433 5889999987543 2334566778999999999999999999996543 5689999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
+|. ++|.+.+. -.++-.+...|..|++.|+.|||+. +|+||||||+||++..++.+||.|||+|+.....
T Consensus 102 ~m~-~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 102 LMD-ANLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hhh-hHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcc
Confidence 995 58887774 3356667788999999999999998 9999999999999999999999999999754332
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc-------
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI------- 755 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~------- 755 (854)
-..+....|..|.|||++.+..+.+.+||||.||++.||++|+..|.+.. .+-+|.+..-.-|..
T Consensus 172 --~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d------~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 172 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD------HIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred --cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch------HHHHHHHHHHHhcCCCHHHHHH
Confidence 34455668999999999999999999999999999999999999987644 333333321111100
Q ss_pred --------------------cccc-CCcccC--cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 --------------------QGII-DPSLLD--EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 --------------------~~~i-d~~l~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.+ |..... +.+........+++.+|+..+|++|-+++++++|
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0011 000000 1112233457799999999999999999999987
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=1.4e-25 Score=232.40 Aligned_cols=196 Identities=35% Similarity=0.547 Sum_probs=170.2
Q ss_pred hhccccccCcEEEEEEEECC-CcEEEEEEEecCCcc-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 530 LEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.||+|++|.||++...+ ++.+|+|.+...... ....+.+|++.+++++|+|++++++++......++++|+++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence 45789999999999999875 889999999765444 5678889999999999999999999999999999999999999
Q ss_pred CHHHhhccccccccc-ccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 608 TLKEHLYGTLTHEQR-INWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 608 sL~~~L~~~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
+|.+++... .. +++.....++.+++.+|.+||+. +++|+||+|+||+++.++.++|+|||.+..........
T Consensus 83 ~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 83 DLFDYLRKK----GGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 999998532 22 78889999999999999999998 99999999999999999999999999998665432112
Q ss_pred eecccccccccCcccc-ccCcCCCcchhhhHHHHHHHHHhCCccccc
Q 003046 687 SSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISGQEAISN 732 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~-~~~~~s~~sDVwS~Gvvl~elltG~~pf~~ 732 (854)
.....++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 2334578899999998 667778899999999999999999999965
No 401
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=4.8e-27 Score=252.17 Aligned_cols=278 Identities=19% Similarity=0.265 Sum_probs=208.7
Q ss_pred cccccccCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC------CCce
Q 003046 512 AEAAHCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH------HRNL 584 (854)
Q Consensus 512 ~~~~~~~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~------HpnI 584 (854)
.+..-.+.++|+.+..|.+....|+|-|++|.+|... .|..||||++..+..- .+.=..|+++|++|+ --++
T Consensus 418 aEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 418 AEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred ccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHH
Confidence 3455667889999999998889999999999999866 5889999999866432 344467999999995 3478
Q ss_pred eeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC
Q 003046 585 VQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 585 v~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
++|+-.|...+++|||+|-+ ..+|.+.|... .....|....+..++.|+.-||..|..+ +|+|.||||.||||++
T Consensus 497 lrl~r~F~hknHLClVFE~L-slNLRevLKKy-G~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 497 LRLFRHFKHKNHLCLVFEPL-SLNLREVLKKY-GRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNE 571 (752)
T ss_pred HHHHHHhhhcceeEEEehhh-hchHHHHHHHh-CcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEecc
Confidence 89999999999999999966 46888888543 3455677888899999999999999998 9999999999999997
Q ss_pred C-CcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchH
Q 003046 665 H-MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 743 (854)
Q Consensus 665 ~-~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~ 743 (854)
. ..+||||||.|......... ...-+..|.|||++.+..|+...|+||.||.||||.||+..|.+.+...... +.
T Consensus 572 ~k~iLKLCDfGSA~~~~eneit---PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr-l~ 647 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASENEIT---PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLR-LF 647 (752)
T ss_pred CcceeeeccCcccccccccccc---HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHH-HH
Confidence 6 56899999999765443221 1223568999999999999999999999999999999999998755222111 11
Q ss_pred HHHHH-----hhhcCCc---------------------------ccccCC------cccC-----cCCHHHHHHHHHHHH
Q 003046 744 QWAKL-----HIESGDI---------------------------QGIIDP------SLLD-----EYDIQSMWKIEEKAL 780 (854)
Q Consensus 744 ~~~~~-----~~~~~~~---------------------------~~~id~------~l~~-----~~~~~~~~~l~~l~~ 780 (854)
.-++. .+..+.+ ...+.| .|.. .-....+..+.+|+.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 11110 1111110 001111 0100 112345567889999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 003046 781 MCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 781 ~Cl~~~P~~RPsm~eV~~~ 799 (854)
.|+..||++|-|..|.++|
T Consensus 728 kml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHhccChhhcCCHHHHhcC
Confidence 9999999999999998875
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=250.55 Aligned_cols=193 Identities=22% Similarity=0.416 Sum_probs=164.1
Q ss_pred HhhccccccCcEEEEEEEECC-CcEEEEEEEecCCcc--------chhchHHHHHHhhhcC---CCceeeEeeeeeecCe
Q 003046 529 MLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGR 596 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~ 596 (854)
...+.+|.|+||.|+.|.++. ...|+||.+.+...- .......|++||..++ |+||++++++|++++.
T Consensus 564 ttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~ 643 (772)
T KOG1152|consen 564 TTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDY 643 (772)
T ss_pred eeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCe
Confidence 345789999999999999884 567899998764221 1124567999999997 9999999999999999
Q ss_pred EEEEEEecC-CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 597 SVLVYEFMH-NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 597 ~~lV~e~~~-~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
++|+||-.. +-+|.+++ ....++++..+..|+.|++.|+++||+. +|||||||-+||.++.+|-+||+|||.
T Consensus 644 yyl~te~hg~gIDLFd~I----E~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 644 YYLETEVHGEGIDLFDFI----EFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred eEEEecCCCCCcchhhhh----hccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccc
Confidence 999999754 44788888 4467799999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCC-cchhhhHHHHHHHHHhCCcccc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTD-KSDVYSFGVILLELISGQEAIS 731 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~-~sDVwS~Gvvl~elltG~~pf~ 731 (854)
|.+...+. ....+||.+|.|||++.+.+|-- .-|||++|++||-++....||.
T Consensus 717 aa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 97765443 34467999999999999988765 4699999999999998888874
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-26 Score=253.69 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=197.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+++|.|.||.||||+.+ .++..|||+++-.......-..+|+-+++.++||||+.++|.+...+..++.||||.+
T Consensus 17 yellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgg 96 (829)
T KOG0576|consen 17 YELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGG 96 (829)
T ss_pred hhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCC
Confidence 445688999999999999876 6889999999877666667778899999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|++.-+. -..+++.++..++++.++||+|||+. +=+|||||-.|||+++.|.+|++|||.+-.+... ...
T Consensus 97 gslQdiy~~----TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitat-i~K 168 (829)
T KOG0576|consen 97 GSLQDIYHV----TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-IAK 168 (829)
T ss_pred Ccccceeee----cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhh-hhh
Confidence 999886643 35678888888999999999999998 8899999999999999999999999987543322 122
Q ss_pred eecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 687 SSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.....||+.|||||+.. .+.|...+|||+.|+...|+---+.|..+.. ...+...+...... -+.+
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh--------pmr~l~LmTkS~~q---pp~l 237 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH--------PMRALFLMTKSGFQ---PPTL 237 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc--------hHHHHHHhhccCCC---CCcc
Confidence 34456999999999874 5678999999999999999877776654322 11112222111110 1112
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+. ..-...+.++++.|+..+|++||+++.+++|
T Consensus 238 kDk--~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 238 KDK--TKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred cCC--ccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 211 1223457899999999999999999988764
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=3.6e-25 Score=272.09 Aligned_cols=196 Identities=18% Similarity=0.268 Sum_probs=139.0
Q ss_pred hcCC-CceeeEeeee-------eecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc
Q 003046 578 RIHH-RNLVQFLGYC-------QEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA 649 (854)
Q Consensus 578 ~l~H-pnIv~l~g~~-------~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 649 (854)
.++| +||++++++| ......++++|++ +++|.++|.. ....+++.+++.++.||++||+|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 3455 6888888877 2334567788877 5699999953 235589999999999999999999998 9
Q ss_pred eeccCCCCCCeEEcCC-------------------CcEEEEEecccccccCCCc---------------ceeeccccccc
Q 003046 650 IIHRDLKSSNILLDKH-------------------MRAKVSDFGLSKFAVDGAS---------------HVSSIVRGTVG 695 (854)
Q Consensus 650 ivHrDIkp~NILl~~~-------------------~~~kL~DFGla~~~~~~~~---------------~~~~~~~gt~~ 695 (854)
|+||||||+||||+.. +.+|++|||+++....... .......||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 9999999999999654 4556666666653211000 00111357899
Q ss_pred ccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHH
Q 003046 696 YLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKI 775 (854)
Q Consensus 696 Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l 775 (854)
|||||++.+..++.++|||||||+||||++|..|+.... ..+...... .+.+.. .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-----~~~~~~~~~---------~~~~~~-----~~~~~~~ 241 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-----RTMSSLRHR---------VLPPQI-----LLNWPKE 241 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-----HHHHHHHHh---------hcChhh-----hhcCHHH
Confidence 999999999999999999999999999999988865321 011111000 011111 1112335
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 003046 776 EEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 776 ~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..++.+|++++|.+||+|.||+++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhc
Confidence 678889999999999999999864
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.5e-24 Score=212.71 Aligned_cols=253 Identities=20% Similarity=0.304 Sum_probs=181.9
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEee-eeeecCeEEEEEEe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLG-YCQEEGRSVLVYEF 603 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g-~~~~~~~~~lV~e~ 603 (854)
.+.+.+.+|+|.||.+-++.++ ..+.+++|.++.. ....++|.+|..-=-.+ .|.||+.-++ .|...+.+++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 4667889999999999999988 4678899988643 23467788887543334 6899998776 46777888999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc--CCCcEEEEEecccccccC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~--~~~~~kL~DFGla~~~~~ 681 (854)
++.|+|.+.+. ...+.+....+++.|+++||.|+|++ .+||||||.+||||- +..++||||||+++....
T Consensus 104 aP~gdL~snv~-----~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 104 APRGDLRSNVE-----AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred CccchhhhhcC-----cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999988773 24466777888999999999999999 999999999999984 335899999999864322
Q ss_pred CCcceeecccccccccCccccccC-----cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQ-----QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
......-+..|.+||..... .....+|||.||++++.++||+.||.... ..++...+|.. +..+...
T Consensus 176 ----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~--~~d~~Y~~~~~--w~~rk~~ 247 (378)
T KOG1345|consen 176 ----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS--IMDKPYWEWEQ--WLKRKNP 247 (378)
T ss_pred ----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh--ccCchHHHHHH--HhcccCc
Confidence 11223346789999987543 35667899999999999999999997433 22333444432 2222211
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
.-|..-..+. .++.++-.+-+.++|++|-...++.++...
T Consensus 248 --~~P~~F~~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 248 --ALPKKFNPFS----EKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred --cCchhhcccC----HHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 1111112222 245566677788999999666666655443
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1.7e-23 Score=209.33 Aligned_cols=168 Identities=20% Similarity=0.171 Sum_probs=126.5
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ...+++.+++.|+.|++.||+|||+. + ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 6888888532 44689999999999999999999997 4 999999999999999 99987654322
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
..||+.|||||++.+..++.++|||||||++|||++|+.||...... ...+..+.... ... ++.-. .
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~-~~~------~~~~~-~ 130 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGM-PAD------DPRDR-S 130 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHh-ccC------Ccccc-c
Confidence 25899999999999999999999999999999999999999654311 11111111111 110 00000 0
Q ss_pred CCHHHH--HHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 767 YDIQSM--WKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 767 ~~~~~~--~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
...... ..+.+++.+|++.+|++||++.|+++++....
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 111112 25899999999999999999999999998764
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.89 E-value=1.2e-23 Score=223.49 Aligned_cols=257 Identities=22% Similarity=0.330 Sum_probs=187.5
Q ss_pred HhhccccccCcEEEEEEEEC----CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEe
Q 003046 529 MLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
...++||+|.|++||+|.+. ..+.||+|.+...+ ....+..|+++|..+ .+.||+++.+++...+..++|+||
T Consensus 39 ~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~ 116 (418)
T KOG1167|consen 39 KVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPY 116 (418)
T ss_pred hhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecc
Confidence 44689999999999999754 36789999886543 234588999999999 589999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEecccccccC-
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVD- 681 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~~~- 681 (854)
++.....++... ++...+..++..+..||.++|.. |||||||||+|+|.+.. +.-.|.|||+|.....
T Consensus 117 ~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 117 FEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred cCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 999888887742 55677888999999999999999 99999999999999854 6789999999961100
Q ss_pred C-----Cc-------------------------------------ceeecccccccccCcccccc-CcCCCcchhhhHHH
Q 003046 682 G-----AS-------------------------------------HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGV 718 (854)
Q Consensus 682 ~-----~~-------------------------------------~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gv 718 (854)
. .. .......||+||.|||++.. ...+.++||||.||
T Consensus 187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV 266 (418)
T KOG1167|consen 187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV 266 (418)
T ss_pred hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence 0 00 00112459999999999875 56788999999999
Q ss_pred HHHHHHhCCcccccccccccccchHHHHHH---------hhhcCC--ccc---------------ccC-CcccC-c----
Q 003046 719 ILLELISGQEAISNEKFGANCRNIVQWAKL---------HIESGD--IQG---------------IID-PSLLD-E---- 766 (854)
Q Consensus 719 vl~elltG~~pf~~~~~~~~~~~l~~~~~~---------~~~~~~--~~~---------------~id-~~l~~-~---- 766 (854)
|++-+++++.||-... .+...+.+.+.. ..-.|. +.+ -++ +.+.. .
T Consensus 267 I~Lslls~~~PFf~a~--dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~ 344 (418)
T KOG1167|consen 267 ILLSLLSRRYPFFKAK--DDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT 344 (418)
T ss_pred eeehhhccccccccCc--cccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence 9999999999985432 111111111110 000111 100 000 00000 0
Q ss_pred ----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 ----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........++++..+|+..||.+|.|+++.++|
T Consensus 345 ~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 345 EREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 001112367899999999999999999999987
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=9.1e-22 Score=216.36 Aligned_cols=160 Identities=19% Similarity=0.181 Sum_probs=124.2
Q ss_pred HHhhccccccCcEEEEEEEEC--CCcEEEEEEEecCC-----ccchhchHHHHHHhhhcCCCceee-EeeeeeecCeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQ-FLGYCQEEGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~-l~g~~~~~~~~~l 599 (854)
|.+.+.||+|+||+||+|.++ +++.||||++.... ......+.+|+++|++++|+|+++ ++++ +..++
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~L 95 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGL 95 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEE
Confidence 556789999999999999875 47778999875331 112456899999999999999985 4432 45799
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCC-CCCCeEEcCCCcEEEEEeccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDL-KSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDI-kp~NILl~~~~~~kL~DFGla~~ 678 (854)
||||+++++|.. +. ... ...++.++++||.|||+. +|+|||| ||+|||++.++.+||+|||+|+.
T Consensus 96 VmE~~~G~~L~~-~~----~~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 96 VRGWTEGVPLHL-AR----PHG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred EEEccCCCCHHH-hC----ccc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 999999999963 21 111 135788999999999998 9999999 99999999999999999999986
Q ss_pred ccCCCcce-------eecccccccccCccccccC
Q 003046 679 AVDGASHV-------SSIVRGTVGYLDPEYYISQ 705 (854)
Q Consensus 679 ~~~~~~~~-------~~~~~gt~~Y~aPE~~~~~ 705 (854)
........ -....+++.|+|||++...
T Consensus 162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 54432111 1345688999999998643
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=6.6e-21 Score=209.67 Aligned_cols=261 Identities=21% Similarity=0.244 Sum_probs=194.1
Q ss_pred HHHhhccccccCcEEEEEEEECCC--cEEEEEEEecCCccchhchHHHHHHhhhcCC----CceeeEeeee-eecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDG--KEIAVKVLTSNSYQGKREFTNEVTLLSRIHH----RNLVQFLGYC-QEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~--~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H----pnIv~l~g~~-~~~~~~~l 599 (854)
.+.+.++||+|+||.||++..... ..+|+|+...........+..|+.++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 466788999999999999987653 4789998765533333378889999998873 6888888888 47778899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-----CcEEEEEec
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-----MRAKVSDFG 674 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-----~~~kL~DFG 674 (854)
||+.+ |.+|.++..... .++++..+.+.|+.|++.+|++||+. |++||||||.|+++... ..+.|.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99976 679998764332 57899999999999999999999998 99999999999999865 469999999
Q ss_pred ccc--cccCCCc----ce---eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH
Q 003046 675 LSK--FAVDGAS----HV---SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW 745 (854)
Q Consensus 675 la~--~~~~~~~----~~---~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~ 745 (854)
+++ ....... .. .....||..|.++....+...+.+.|+||++.++.|++.|..||...........+...
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~ 252 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKD 252 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHH
Confidence 998 3222111 11 22355999999999999999999999999999999999999999654422111111111
Q ss_pred HHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 746 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 746 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.... .... ........+.++...+-..+...+|....+...|+.....
T Consensus 253 ----~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 253 ----PRKL----LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred ----hhhh----cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1111 0110 1111123455555566668999999999999998877553
No 410
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-22 Score=201.79 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=189.9
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
++..+|.+...|..|+|+|+ |..+++|++.... ..-.++|.+|.-.|+...||||+.++|.|.......++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 35567889999999999998 6778888876443 23357899999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEE--EecccccccCCCc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS--DFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~--DFGla~~~~~~~~ 684 (854)
|+|...|++. ..-..+..++.+++.++|+|++|||+.. +-|..--+.+..|++|++.+++|+ |--++ ..
T Consensus 272 gslynvlhe~--t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfs---fq--- 342 (448)
T KOG0195|consen 272 GSLYNVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFS---FQ--- 342 (448)
T ss_pred hHHHHHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceee---ee---
Confidence 9999999864 3445677889999999999999999963 334444689999999999998884 32211 11
Q ss_pred ceeecccccccccCccccccCcCC---CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLT---DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s---~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.....-.+.||+||.++..+-+ .++|+|||++++||+.|...||.+...-+.. . .+.-+
T Consensus 343 --e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------m----------kiale 404 (448)
T KOG0195|consen 343 --EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------M----------KIALE 404 (448)
T ss_pred --ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------h----------hhhhc
Confidence 0112246889999999876543 4789999999999999999999765411110 0 11112
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.++...+......+.+|+.-|+..||.+||.++.|+-.||++.
T Consensus 405 glrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 405 GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 2333334444456778888999999999999999999998763
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=6.2e-20 Score=199.30 Aligned_cols=260 Identities=28% Similarity=0.417 Sum_probs=195.9
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCC-ceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHR-NLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~Hp-nIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+++......+++++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 3 RILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred eeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 34578999999999999887 88999998765332 366789999999999988 7999999997777789999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-cEEEEEecccccccCCC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~~~ 683 (854)
.++++.+++...... ..+.......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 81 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 81 DGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999766432111 3677888899999999999999998 899999999999999998 79999999997554433
Q ss_pred cc-----eeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 684 SH-----VSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 684 ~~-----~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
.. ......||..|+|||.+.+ .......|+||+|++++++++|..||................... ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~ 232 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL----PT 232 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc----CC
Confidence 22 2355679999999999987 578889999999999999999999976543110011111111111 10
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .................+.+++..|+..+|..|.++.+...+
T Consensus 233 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 233 P-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred c-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 000000111012223467889999999999999999988876
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1.2e-19 Score=183.70 Aligned_cols=139 Identities=19% Similarity=0.182 Sum_probs=107.2
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCcc--c-------hhc-----------------hHHHHHHhhhcCCCce
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--G-------KRE-----------------FTNEVTLLSRIHHRNL 584 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--~-------~~~-----------------~~~E~~~l~~l~HpnI 584 (854)
...||+|+||.||+|...+|+.||||+++..... . ... ...|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999888999999999754211 1 111 2349999999987776
Q ss_pred eeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHH-HhCCCCceeccCCCCCCeEEc
Q 003046 585 VQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYL-HTGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 585 v~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDIkp~NILl~ 663 (854)
.....+.. ...++||||++++++..... ....++......++.|++.+|.|| |+. +|+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 43322222 22389999999887654431 234678888999999999999999 677 999999999999998
Q ss_pred CCCcEEEEEecccccc
Q 003046 664 KHMRAKVSDFGLSKFA 679 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~ 679 (854)
++.++|+|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999998754
No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2.1e-20 Score=218.82 Aligned_cols=253 Identities=22% Similarity=0.246 Sum_probs=182.3
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecC--Cccch----hchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGK----REFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~----~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.++.+|.|++|.|+..... ..+..+.|..+.. ..... ..+..|+.+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3578999999977777543 3333444433210 11111 125567778888899999888887777666666699
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
||+. +|..++. ....+....+..++.|+..|+.|+|+. ||.|||+|++|++++.+|.+||+|||.+....-+
T Consensus 402 ~~~~-Dlf~~~~----~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVM----SNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHh----cccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 9988883 234677888889999999999999998 9999999999999999999999999998644322
Q ss_pred -C--cceeecccccccccCccccccCcCCCc-chhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 683 -A--SHVSSIVRGTVGYLDPEYYISQQLTDK-SDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 683 -~--~~~~~~~~gt~~Y~aPE~~~~~~~s~~-sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
. .+......|+..|+|||.+.+..|... .||||.|+++..|.+|+.||......+... .+ ....++.
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--~~----~~~~~~~--- 544 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--KT----NNYSDQR--- 544 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--hh----hcccccc---
Confidence 2 255667789999999999999999874 699999999999999999996554222110 00 0000000
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
-+..-..........+...++.++++++|.+|-||++|++.
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 00000001112334567788999999999999999999863
No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.80 E-value=1.9e-19 Score=185.13 Aligned_cols=199 Identities=22% Similarity=0.367 Sum_probs=167.0
Q ss_pred HHHhhccccccCcEEEEEEEE-CCCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.++++||+|.||+++.|+. -+++.||||.-... ....++..|.+..+.|. .++|...+-|-.++.+-.||+|..
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 355789999999999999974 47999999975433 23456888998888884 689988888888888889999987
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-----CcEEEEEecccccc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-----MRAKVSDFGLSKFA 679 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-----~~~kL~DFGla~~~ 679 (854)
|-||.|+.. -.+++++..+++.+|.|+..-++|+|++ .+|.|||||+|+||..- ..+.|+|||+|+.+
T Consensus 107 -GPSLEDLFD---~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 107 -GPSLEDLFD---LCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred -CcCHHHHHH---HhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 568888763 2467899999999999999999999999 99999999999999743 35899999999977
Q ss_pred cCCCcce------eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccc
Q 003046 680 VDGASHV------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 680 ~~~~~~~------~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~ 734 (854)
.+..+.. .....||.+||+-....+++-+.+.|+-|+|-++.+.|-|..||.+..
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 6654332 123459999999999999999999999999999999999999998765
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.80 E-value=2.1e-19 Score=177.31 Aligned_cols=260 Identities=22% Similarity=0.298 Sum_probs=190.4
Q ss_pred HHHHHhhccccccCcEEEEEEEE-CCCcEEEEEEEecCCccchhchHHHHHHhhhcCC-CceeeEeeeeeecCeEEEEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH-RNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~~~~~~lV~e 602 (854)
...+.+.++||.|+||.+|.|.. .+|++||||+-+... ...++.-|..+.+.++| ..|..+..|..+...-.+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 34566789999999999999974 579999999865432 34567889999999975 677778888888899999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC---CcEEEEEecccccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~~kL~DFGla~~~ 679 (854)
.. |-+|.+++. -..+.++-.+.+-++-|++.-++|+|.+ +++||||||+|.|..-+ ..+.++|||+|+.+
T Consensus 92 LL-GPsLEdLfn---fC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 92 LL-GPSLEDLFN---FCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cc-CccHHHHHH---HHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 87 668888763 1355678889999999999999999999 89999999999999743 56899999999866
Q ss_pred cCCCcc--e----eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcC
Q 003046 680 VDGASH--V----SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 680 ~~~~~~--~----~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
.+..+. . .....||.+|.+--...+...+.+.|+-|+|.||..+.-|..||.+.......+..- .+.+.
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE-----kI~Ek 239 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE-----KISEK 239 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH-----HHHHh
Confidence 554322 2 233569999999888778888899999999999999999999998766322211111 11111
Q ss_pred CcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 754 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 754 ~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
.+.-.+ ..|...++. ++...+.-|-..--++-|...-+-+.+.-+
T Consensus 240 K~s~~i-e~LC~G~P~----EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 240 KMSTPI-EVLCKGFPA----EFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred hcCCCH-HHHhCCCcH----HHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 111111 112223333 355566677777777778776666555544
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.2e-19 Score=185.87 Aligned_cols=174 Identities=14% Similarity=0.171 Sum_probs=133.5
Q ss_pred HHHHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhc---------hHHHHHHhhhcCCCceeeEeeee
Q 003046 521 SDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKRE---------FTNEVTLLSRIHHRNLVQFLGYC 591 (854)
Q Consensus 521 ~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~---------~~~E~~~l~~l~HpnIv~l~g~~ 591 (854)
.++....+...+.+|.|+||.||.... ++..+|||+++......... +++|++.+.++.|++|..+.+++
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 445555666788999999999999766 57789999997553332222 68899999999999999998886
Q ss_pred eec--------CeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc
Q 003046 592 QEE--------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 592 ~~~--------~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~ 663 (854)
... +..++||||++|.+|.+... ++. ....+++.+|..+|+. +++|||+||+||+++
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 533 35789999999999987631 111 2456899999999998 999999999999999
Q ss_pred CCCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHH
Q 003046 664 KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELI 724 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ell 724 (854)
.++ ++|+|||..+........ ..+.....+..++|+||||+.+..+.
T Consensus 170 ~~g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 988 999999987644221111 01344556778999999999987654
No 417
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=4.8e-19 Score=198.05 Aligned_cols=216 Identities=25% Similarity=0.390 Sum_probs=166.5
Q ss_pred hhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCce-eccC
Q 003046 576 LSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAI-IHRD 654 (854)
Q Consensus 576 l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-vHrD 654 (854)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+.. ....++|.....+.++++.||+|||.. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 4578999999999999999999999999999999999964 467799999999999999999999997 44 8999
Q ss_pred CCCCCeEEcCCCcEEEEEecccccccCC-CcceeecccccccccCccccccC-------cCCCcchhhhHHHHHHHHHhC
Q 003046 655 LKSSNILLDKHMRAKVSDFGLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQ-------QLTDKSDVYSFGVILLELISG 726 (854)
Q Consensus 655 Ikp~NILl~~~~~~kL~DFGla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~~sDVwS~Gvvl~elltG 726 (854)
++++|+++|....+||+|||+....... .........-..-|.|||.+... ..+.++||||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999998765321 01111112234579999998763 146679999999999999999
Q ss_pred CcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 727 QEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 727 ~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
+.||...........++.+++. .-...+-|.+.... +....+..++..||..+|.+||++++|-..++.+.
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred cCccccccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9999875544433455555443 11112222222111 33336889999999999999999999988777654
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.3e-18 Score=176.45 Aligned_cols=140 Identities=20% Similarity=0.203 Sum_probs=109.5
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCccc--------------------------hhchHHHHHHhhhcCCCce
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG--------------------------KREFTNEVTLLSRIHHRNL 584 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~--------------------------~~~~~~E~~~l~~l~HpnI 584 (854)
...||+|+||.||+|...+|+.||||+++...... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999998789999999987652110 1123578899999999987
Q ss_pred eeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEEc
Q 003046 585 VQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 585 v~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~ 663 (854)
.....+... ..++||||++++++..... ....++......++.|++.++.++|+ . ||+||||||+|||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l----~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL----KDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhh----hhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 544433332 2489999999886543321 12346677888999999999999999 7 999999999999999
Q ss_pred CCCcEEEEEeccccccc
Q 003046 664 KHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~~ 680 (854)
++.++|+|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 8899999999997654
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.78 E-value=9.2e-20 Score=211.81 Aligned_cols=249 Identities=21% Similarity=0.278 Sum_probs=177.6
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCC-ccchhchHHHHHH--hhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS-YQGKREFTNEVTL--LSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~~E~~~--l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||++.|=+|.+|++++|. |+||++-+.. .-.-+.|.++++- ...++|||.+++.-+-......+||-+|..
T Consensus 26 ~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvk 104 (1431)
T KOG1240|consen 26 HYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVK 104 (1431)
T ss_pred eeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHh
Confidence 45678999999999999998777 9999986553 3334455544433 445589999998888777777788888875
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc--ccCCC
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF--AVDGA 683 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~--~~~~~ 683 (854)
+ +|.|.| ..+..+...+...|+.|++.||..+|.. +|+|||||.+||||+.-.-+.|+||.--+. +..+.
T Consensus 105 h-nLyDRl----STRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 105 H-NLYDRL----STRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred h-hhhhhh----ccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 4 666666 4566678888889999999999999998 999999999999999999999999986552 22222
Q ss_pred ccee----ecccccccccCccccccC----------c-CCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHH
Q 003046 684 SHVS----SIVRGTVGYLDPEYYISQ----------Q-LTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 684 ~~~~----~~~~gt~~Y~aPE~~~~~----------~-~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~ 747 (854)
.... .+...-..|+|||.+... . .+.+.||||+|||+.||++ |+++|+-.. +..+
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ-------L~aY-- 247 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ-------LLAY-- 247 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH-------HHhH--
Confidence 2111 122234579999998542 1 5678899999999999998 688885322 2222
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+.+. .......|.. .+ -..+.+++..|++.||++|-++++.++.-.+.
T Consensus 248 ---r~~~-~~~~e~~Le~-Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 248 ---RSGN-ADDPEQLLEK-IE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred ---hccC-ccCHHHHHHh-Cc---CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 1110 0000000000 00 01477899999999999999999999884443
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=7.4e-18 Score=169.11 Aligned_cols=185 Identities=14% Similarity=0.138 Sum_probs=139.0
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCccch----hchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecC
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGK----REFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~----~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
...|++|+||+||.+.- .+.+++.+.+........ ..+.+|+++|++++ |+++.+++++ +..+++|||+.
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 46799999999997765 578888887765543222 24789999999995 5889999886 35699999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCC-CCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDL-KSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDI-kp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
|.+|.+.+. . ....++.|++++|.++|+. ||+|||| ||+|||++.++.++|+|||+|........
T Consensus 82 G~~L~~~~~----~-------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 82 GAAMYQRPP----R-------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred CccHHhhhh----h-------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999865431 1 1134678999999999998 9999999 79999999999999999999985443221
Q ss_pred c----e--------eecccccccccCccccccC-cCC-CcchhhhHHHHHHHHHhCCccccccc
Q 003046 685 H----V--------SSIVRGTVGYLDPEYYISQ-QLT-DKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 685 ~----~--------~~~~~gt~~Y~aPE~~~~~-~~s-~~sDVwS~Gvvl~elltG~~pf~~~~ 734 (854)
. . ......++.|++|+...-. ..+ .+.+.++-|+-+|.++|+..+.-...
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 0 1122367788888765322 223 46688999999999999998865443
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.1e-18 Score=194.85 Aligned_cols=186 Identities=29% Similarity=0.400 Sum_probs=156.8
Q ss_pred cccccCcEEEEEEE----ECCCcEEEEEEEecCCccc--hhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecC
Q 003046 533 KIGSGGFGVVYYGK----LKDGKEIAVKVLTSNSYQG--KREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~----~~~~~~vAvK~l~~~~~~~--~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+|+|.||.|+..+ .+.|+.+|+|++++..... +.....|..++..++ ||.++++.-.+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999998753 3357788999887653221 224556888888887 9999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|.|...+. ....+.+.....+...++-+++++|+. +|+|||+|++||+++.+|.+++.|||+++........
T Consensus 81 gg~lft~l~----~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLS----KEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhccc----cCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 999988773 455667777778889999999999998 9999999999999999999999999999866543332
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 732 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~ 732 (854)
+||..|||||++. ....++|-||||++++||+||..||..
T Consensus 154 -----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 -----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred -----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 7999999999998 567889999999999999999999975
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=4.3e-17 Score=166.63 Aligned_cols=134 Identities=18% Similarity=0.253 Sum_probs=104.3
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhc-----CCCceeeEeeeeeecC---e-EEEEE
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-----HHRNLVQFLGYCQEEG---R-SVLVY 601 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~~~~---~-~~lV~ 601 (854)
.+.||+|+||.||. +++....+||++........+.+.+|+.+++.+ .||||++++|++.++. . ..+|+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 36799999999996 443333479988765444567899999999999 5799999999998763 3 33789
Q ss_pred Ee--cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHH-HHHHhCCCCceeccCCCCCCeEEcC----CCcEEEEEec
Q 003046 602 EF--MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGI-EYLHTGCVPAIIHRDLKSSNILLDK----HMRAKVSDFG 674 (854)
Q Consensus 602 e~--~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivHrDIkp~NILl~~----~~~~kL~DFG 674 (854)
|| +.+|+|.+++.. ..+++. ..++.+++.++ +|||+. +|+||||||+|||++. +++++|+||+
T Consensus 85 e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 85 DFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred cCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 99 558999999943 124444 35677888777 999998 9999999999999974 3489999954
Q ss_pred cc
Q 003046 675 LS 676 (854)
Q Consensus 675 la 676 (854)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.72 E-value=7e-17 Score=170.47 Aligned_cols=230 Identities=18% Similarity=0.202 Sum_probs=145.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCC----------CceeeEeeee-----
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHH----------RNLVQFLGYC----- 591 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H----------pnIv~l~g~~----- 591 (854)
.+.||.|+++.||.+++. +++++|||+...... ..-+++++|.-....+.+ -.++.-++..
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 568999999999999987 489999999864432 223456666655544322 1121111111
Q ss_pred ----eec---C-----eEEEEEEecCCCCHHHhhcc---cccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCC
Q 003046 592 ----QEE---G-----RSVLVYEFMHNGTLKEHLYG---TLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLK 656 (854)
Q Consensus 592 ----~~~---~-----~~~lV~e~~~~gsL~~~L~~---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIk 656 (854)
... . ..+++|+-+ .++|.+++.- .......+....++.+..|+.+.+++||+. |++|+|||
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~ 172 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIK 172 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-S
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccc
Confidence 111 1 236778877 4688877532 212233455666677889999999999999 99999999
Q ss_pred CCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccC--------cCCCcchhhhHHHHHHHHHhCCc
Q 003046 657 SSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ--------QLTDKSDVYSFGVILLELISGQE 728 (854)
Q Consensus 657 p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--------~~s~~sDVwS~Gvvl~elltG~~ 728 (854)
|+|++++.+|.++|+||+....... .......+..|.+||..... .++.+.|.|++|+++|.|.+|+.
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~----~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGT----RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTE----EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred eeeEEEcCCCCEEEcChHHHeecCc----eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 9999999999999999987654322 11113356789999987542 47888999999999999999999
Q ss_pred ccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCC
Q 003046 729 AISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR 790 (854)
Q Consensus 729 pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R 790 (854)
||+.......... ...... +..+.+..|+...++.+|.+|
T Consensus 249 Pf~~~~~~~~~~~---------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADPEW---------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTSGG---------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccccc---------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9986542211100 111222 445678899999999999987
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=1.5e-16 Score=189.61 Aligned_cols=253 Identities=19% Similarity=0.209 Sum_probs=179.8
Q ss_pred HHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcC---CCceeeEeeeeeecCeEEE
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~~~l 599 (854)
+....+.+.+.||+|+||.||+|...+|+.||+|+-+....+.. --=.+++.+|+ -+-|..+..+..-.+..+|
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf---YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF---YICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee---eehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 33344556788999999999999998899999999776655422 11123344444 2344444455556677899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-------CCcEEEEE
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------HMRAKVSD 672 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-------~~~~kL~D 672 (854)
|+||.+.|+|.+++. ..+.++|.-...++.|++..+++||.. +||||||||+|.||.. ...++|+|
T Consensus 772 v~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred eeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEe
Confidence 999999999999995 566789999999999999999999998 9999999999999952 34689999
Q ss_pred ecccccccCC-CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 673 FGLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 673 FGla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
||.+-.+.-- ........++|-.+-.+|+..++.++..+|.|.++-+++-||.|+.-= ..
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------------------~~ 905 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------------------VK 905 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------------------hc
Confidence 9998533211 223455677899999999999999999999999999999999997421 01
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 808 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~ 808 (854)
+| -...++..+..-...+...++.+ ..|.++-..=|...++...|++++....
T Consensus 906 ~g-~~~~~~~~~~Ry~~~~~W~~~F~---~lLN~~~~~~p~l~~lr~~~~~~~~~~~ 958 (974)
T KOG1166|consen 906 NG-SSWMVKTNFPRYWKRDMWNKFFD---LLLNPDCDTLPNLQELRTELEEVLAEHF 958 (974)
T ss_pred CC-cceeccccchhhhhHHHHHHHHH---HHhCcCcccchhHHHHHHHHHHHHHHHH
Confidence 11 11112222111111222223333 4444666667788888888888766443
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=2.7e-16 Score=164.59 Aligned_cols=140 Identities=22% Similarity=0.256 Sum_probs=108.0
Q ss_pred HHhhccccccCcEEEEEEE--ECCCcEEEEEEEecCCcc------------------------chhchHHHHHHhhhcCC
Q 003046 528 KMLEKKIGSGGFGVVYYGK--LKDGKEIAVKVLTSNSYQ------------------------GKREFTNEVTLLSRIHH 581 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~--~~~~~~vAvK~l~~~~~~------------------------~~~~~~~E~~~l~~l~H 581 (854)
+.+.+.||+|+||.||+|. ..+|+.||||+++..... ....+..|++++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999998 458999999998754211 01235679999999975
Q ss_pred Cc--eeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc-eeccCCCCC
Q 003046 582 RN--LVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA-IIHRDLKSS 658 (854)
Q Consensus 582 pn--Iv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDIkp~ 658 (854)
.. +.+.+++ ...++||||+++++|..... ....+.......++.|++.+|.+||+. + ++||||||+
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~ 178 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL----KDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEY 178 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCccccccc----ccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChh
Confidence 33 3344443 23589999999988866542 122344556678999999999999998 8 999999999
Q ss_pred CeEEcCCCcEEEEEecccccc
Q 003046 659 NILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 659 NILl~~~~~~kL~DFGla~~~ 679 (854)
||+++ ++.++|+|||.+...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 889999999998754
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=4e-16 Score=160.89 Aligned_cols=134 Identities=25% Similarity=0.427 Sum_probs=112.6
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCcc--------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.||+|++|.||+|.+ .|..|+||+....... ....+.+|++++..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 5788999987643221 123577899999999999988777777777788999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
++|++|.+.+... .+ .+..++.+++.+|.+||+. +++|||++|.|||++ ++.++|+|||+++.
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988422 11 7788999999999999998 999999999999999 78999999998864
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=6.9e-16 Score=157.65 Aligned_cols=130 Identities=26% Similarity=0.450 Sum_probs=106.1
Q ss_pred cccccCcEEEEEEEECCCcEEEEEEEecCCcc--------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 533 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.||+|+||.||+|.+. +..|++|+....... ....+.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 3899999999999964 788999986543211 1245678999999999887665555566666779999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+|++|.+.+... .. .++.+++.+|.+||+. +++|||++|.||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~----~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEG----ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhc----HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999887421 10 6899999999999998 999999999999999 88999999999864
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=9.6e-16 Score=156.59 Aligned_cols=135 Identities=21% Similarity=0.238 Sum_probs=106.8
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCcc----------------------chhchHHHHHHhhhcCCCc--
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ----------------------GKREFTNEVTLLSRIHHRN-- 583 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~----------------------~~~~~~~E~~~l~~l~Hpn-- 583 (854)
+.+.+.||+|+||.||+|..++|+.||||+++..... ....+..|..++.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 5667899999999999999888999999987643210 0113567888999998874
Q ss_pred eeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc
Q 003046 584 LVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 584 Iv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~ 663 (854)
+...++. ...++||||+++++|.+.... .....++.+++.++.++|+. +|+||||||+||+++
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~ 159 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD 159 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence 4444432 345899999999998765420 23456889999999999998 999999999999999
Q ss_pred CCCcEEEEEecccccc
Q 003046 664 KHMRAKVSDFGLSKFA 679 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~ 679 (854)
++++++|+|||++...
T Consensus 160 ~~~~~~liDfg~~~~~ 175 (198)
T cd05144 160 DDEKIYIIDWPQMVST 175 (198)
T ss_pred CCCcEEEEECCccccC
Confidence 9999999999998543
No 429
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.63 E-value=8.6e-18 Score=157.88 Aligned_cols=177 Identities=22% Similarity=0.326 Sum_probs=143.0
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
.++.++.|+|++|.++.+||.|..+.+|++|++.+|+++. .+.++.++..++.++-. .+ .....+-.++.+|.
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~-lp~~issl~klr~lnvg-mn-----rl~~lprgfgs~p~ 103 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEE-LPTSISSLPKLRILNVG-MN-----RLNILPRGFGSFPA 103 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhh-cChhhhhchhhhheecc-hh-----hhhcCccccCCCch
Confidence 3556788999999999999999999999999999999876 34455555444443210 00 11112223566889
Q ss_pred eeEEEecCCCCc-ccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~-g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|+.|||+.|+|. ..+|..|..|+.|+-|+|++|.+.-+||++++|++|+.|.|..|.+- .+|..++.|++|++|++++
T Consensus 104 levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 999999999996 46899999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred ccccccccccc-----ccccccccccCCcccc
Q 003046 422 NMLSGTVPSSL-----LSKNVVLNYAGNINLH 448 (854)
Q Consensus 422 N~l~g~ip~~l-----~~~l~~l~~~~n~~~~ 448 (854)
|+++ .+|.++ ..+-..+.+..||+..
T Consensus 183 nrl~-vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 183 NRLT-VLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred ceee-ecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 9999 999887 2233556677787753
No 430
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.63 E-value=2.2e-15 Score=158.54 Aligned_cols=197 Identities=19% Similarity=0.215 Sum_probs=135.8
Q ss_pred CCCceeeEeeeeee---------------------------cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHH
Q 003046 580 HHRNLVQFLGYCQE---------------------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIA 632 (854)
Q Consensus 580 ~HpnIv~l~g~~~~---------------------------~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~ 632 (854)
+|||||++.++|.+ ...+++||.... .+|.+++.. +..+.....-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc-----CCCchHHHHHHH
Confidence 59999999887743 235688888664 488888843 234555667789
Q ss_pred HHHHHHHHHHHhCCCCceeccCCCCCCeEEc--CC--CcEEEEEecccccccCC-----CcceeecccccccccCccccc
Q 003046 633 EDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KH--MRAKVSDFGLSKFAVDG-----ASHVSSIVRGTVGYLDPEYYI 703 (854)
Q Consensus 633 ~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~--~~--~~~kL~DFGla~~~~~~-----~~~~~~~~~gt~~Y~aPE~~~ 703 (854)
.|+++|+.|||++ ||.|||+|++|||+. +| ....|+|||++--.... -.......-|.-.-||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999998 999999999999984 33 35789999987421110 001111234778899999987
Q ss_pred cCc------CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHH
Q 003046 704 SQQ------LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEE 777 (854)
Q Consensus 704 ~~~------~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~ 777 (854)
..+ -..|+|.|+.|.+.||+++...||.... +..-+... .++.++ |.+.+ .+...+.+
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG--em~L~~r~-----Yqe~qL-----Palp~----~vpp~~rq 488 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG--EMLLDTRT-----YQESQL-----PALPS----RVPPVARQ 488 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc--hheechhh-----hhhhhC-----CCCcc----cCChHHHH
Confidence 543 2468999999999999999999997532 11111111 122222 22222 23344678
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHH
Q 003046 778 KALMCVLPHGHMRPSISEVLKDIQ 801 (854)
Q Consensus 778 l~~~Cl~~~P~~RPsm~eV~~~L~ 801 (854)
++...++.+|++||+..-....|.
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHHH
Confidence 888999999999999766555544
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.62 E-value=8e-17 Score=176.75 Aligned_cols=176 Identities=28% Similarity=0.384 Sum_probs=130.7
Q ss_pred CeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEec
Q 003046 595 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 595 ~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFG 674 (854)
...++.|++|...+|.++|.... .....++...+.++.|++.|++| + +.+|+|+||.||+...+.++||+|||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhh
Confidence 35789999999999999996442 34456778889999999999999 5 89999999999999999999999999
Q ss_pred ccccccCCC-----cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHH
Q 003046 675 LSKFAVDGA-----SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKL 748 (854)
Q Consensus 675 la~~~~~~~-----~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~ 748 (854)
+........ ....+...||..||+||.+.+..|+.++||||||++|+|++. =..+++... +..
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~-----------t~~ 470 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA-----------TLT 470 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH-----------hhh
Confidence 986554433 223344569999999999999999999999999999999997 223332111 011
Q ss_pred hhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 003046 749 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVL 797 (854)
Q Consensus 749 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~ 797 (854)
-++.+ +++|....+++. -..+..+++.+.|.+||++.++.
T Consensus 471 d~r~g----~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 471 DIRDG----IIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hhhcC----CCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHHh
Confidence 11222 222233333333 24678899999999999554443
No 432
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=2.3e-15 Score=176.97 Aligned_cols=132 Identities=23% Similarity=0.341 Sum_probs=108.4
Q ss_pred hhccccccCcEEEEEEEECCCcEEEEEEEecCC--c------cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 530 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--Y------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
..+.||+|+||+||+|.+.. ..+++|+..... . .....+.+|++++++++|++++....++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 36789999999999998864 344454432211 1 11245788999999999999998888887777889999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
||+++++|.+++. ....++.+++++|.|||+. +++||||||+|||+ .++.++|+|||+++.
T Consensus 416 E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 416 EYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999998873 3467899999999999998 99999999999999 678999999999875
No 433
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.57 E-value=1.7e-15 Score=176.79 Aligned_cols=202 Identities=25% Similarity=0.307 Sum_probs=138.2
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
.+.|..|+||.||..+++ ..+..|+|+=+.+ .+.+- ++.....|.+| |+-
T Consensus 88 IklisngAygavylvrh~~trqrfa~kiNkq~------lilRn--ilt~a~npfvv---------------------gDc 138 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMKINKQN------LILRN--ILTFAGNPFVV---------------------GDC 138 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhcccccc------hhhhc--cccccCCccee---------------------chh
Confidence 578999999999999887 3567888542211 11100 23333334333 333
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC------
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA------ 683 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~------ 683 (854)
...+. ..+.++. +++.+++|||+. +|+|||+||+|.+|+.-|.+|+.|||+++......
T Consensus 139 ~tllk----~~g~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 139 ATLLK----NIGPLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred hhhcc----cCCCCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 33332 1122221 237899999998 99999999999999999999999999987432111
Q ss_pred --------cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 684 --------SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 684 --------~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
.-....++||+.|+|||++....|...+|.|++|+|+||.+-|+.||.+++..+....++.....+.++
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~--- 280 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE--- 280 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc---
Confidence 011234689999999999999999999999999999999999999999887555444444422222111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP 791 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 791 (854)
+.....+..+++.+.++.+|..|-
T Consensus 281 ------------dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 ------------DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ------------CcCCCHHHHHHHHHHHHhChHhhc
Confidence 112223466778888888888886
No 434
>PLN03150 hypothetical protein; Provisional
Probab=99.56 E-value=2.4e-13 Score=161.83 Aligned_cols=91 Identities=31% Similarity=0.468 Sum_probs=81.4
Q ss_pred CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCC-CCCce
Q 003046 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNL-PNLRE 416 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~ 416 (854)
.+++|+.|+|++|+|+|.+|..++.|++|+.|+|++|+|+|.+|+ +++|++|+.|+|++|+|+|.+|..++.+ .++..
T Consensus 440 ~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~ 519 (623)
T PLN03150 440 KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRAS 519 (623)
T ss_pred CCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCce
Confidence 356899999999999999999999999999999999999998886 8999999999999999999999998874 46788
Q ss_pred eeccccccccccc
Q 003046 417 LYVQNNMLSGTVP 429 (854)
Q Consensus 417 L~l~~N~l~g~ip 429 (854)
+++++|...+..|
T Consensus 520 l~~~~N~~lc~~p 532 (623)
T PLN03150 520 FNFTDNAGLCGIP 532 (623)
T ss_pred EEecCCccccCCC
Confidence 9999998553343
No 435
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2.5e-14 Score=144.56 Aligned_cols=135 Identities=23% Similarity=0.298 Sum_probs=96.8
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCcc--chhc----------------------hHHHHHHhhhcCCCc--e
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--GKRE----------------------FTNEVTLLSRIHHRN--L 584 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--~~~~----------------------~~~E~~~l~~l~Hpn--I 584 (854)
.+.||+|+||.||+|...+++.||||++...... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998754221 1111 134555566654432 3
Q ss_pred eeEeeeeeecCeEEEEEEecCCCCHHHh-hcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEE
Q 003046 585 VQFLGYCQEEGRSVLVYEFMHNGTLKEH-LYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILL 662 (854)
Q Consensus 585 v~l~g~~~~~~~~~lV~e~~~~gsL~~~-L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl 662 (854)
.+.+++ ...++||||++++.+... +... ... .....++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-----~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-----RLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh-----hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 344433 245899999999654321 1110 001 4567899999999999999 6 99999999999999
Q ss_pred cCCCcEEEEEecccccc
Q 003046 663 DKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 663 ~~~~~~kL~DFGla~~~ 679 (854)
+ ++.++|+|||.+...
T Consensus 149 ~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 149 D-DGKVYIIDVPQAVEI 164 (187)
T ss_pred E-CCcEEEEECcccccc
Confidence 9 899999999998643
No 436
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.55 E-value=3.6e-15 Score=188.55 Aligned_cols=109 Identities=35% Similarity=0.586 Sum_probs=102.6
Q ss_pred CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
.++|+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|. +.+|++|+.|+|++|+++|.+|..|.+|++|+.|+
T Consensus 474 ~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 474 SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 46899999999999999999999999999999999999998876 89999999999999999999999999999999999
Q ss_pred cccccccccccccc--ccccccccccCCcccc
Q 003046 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~ 448 (854)
|++|+++|.+|..+ +..+..|++++|+..+
T Consensus 554 Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred CCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 99999999999988 6778999999998765
No 437
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.55 E-value=4e-14 Score=136.62 Aligned_cols=134 Identities=25% Similarity=0.296 Sum_probs=113.3
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCC--CceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH--RNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H--pnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.+.||+|.++.||++...+ ..+++|+...... ...+..|+.+++.++| ..+.+++++....+..++++||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 3679999999999999864 7899998765432 4678899999999976 588999998888888999999999877
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+..+ +......++.+++++|++||.....+++|+|++|+||+++..+.++++|||.++.
T Consensus 80 ~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 6543 4456677899999999999986545799999999999999989999999998864
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=2e-13 Score=143.22 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=104.4
Q ss_pred hcccc-ccCcEEEEEEEECCCcEEEEEEEecCC-------------ccchhchHHHHHHhhhcCCCce--eeEeeeeeec
Q 003046 531 EKKIG-SGGFGVVYYGKLKDGKEIAVKVLTSNS-------------YQGKREFTNEVTLLSRIHHRNL--VQFLGYCQEE 594 (854)
Q Consensus 531 ~~~iG-~G~fg~Vy~~~~~~~~~vAvK~l~~~~-------------~~~~~~~~~E~~~l~~l~HpnI--v~l~g~~~~~ 594 (854)
...|| .|+.|+||+.... +..++||.+.... ......+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999886 7889999875321 1123457789999999998875 6677765433
Q ss_pred C----eEEEEEEecCC-CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEE
Q 003046 595 G----RSVLVYEFMHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAK 669 (854)
Q Consensus 595 ~----~~~lV~e~~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~k 669 (854)
. ..++|+|++++ .+|.+++.. ..++. ..+.+++.+|.+||+. ||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~----~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-----APLSE----EQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-----CCCCH----HHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 689888742 22332 2367899999999998 999999999999999999999
Q ss_pred EEEeccccc
Q 003046 670 VSDFGLSKF 678 (854)
Q Consensus 670 L~DFGla~~ 678 (854)
|+|||.++.
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999998864
No 439
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.49 E-value=2.2e-15 Score=165.58 Aligned_cols=188 Identities=21% Similarity=0.289 Sum_probs=132.3
Q ss_pred cccccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCC---CCCCCCCe-----
Q 003046 261 NLSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDP---CLPVPWSW----- 332 (854)
Q Consensus 261 ~~~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dp---c~~~~~~~----- 332 (854)
-+.|+-|..|+|++|.+-+|||.+..|-.|+.|.|++|.+.--.+..|-.+..+.-+.-++..- -.|.+..+
T Consensus 146 finLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~ 225 (1255)
T KOG0444|consen 146 FINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLR 225 (1255)
T ss_pred HHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhh
Confidence 3567888999999999999999999999999999999987664444333332211110000000 00001111
Q ss_pred ---eEeCC--------CCCCC-----------------------eeEEEecCCCCcccCCcccccCccCcEEeccCCccc
Q 003046 333 ---LQCNS--------DPQPS-----------------------ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT 378 (854)
Q Consensus 333 ---~~c~~--------~~~~~-----------------------L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~ 378 (854)
+.|+. -++++ |++|+||.|+|+ .+|+.+.+|++|+.|++.+|+|+
T Consensus 226 dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 226 DVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred hccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc
Confidence 11111 11223 345556666666 67888888888888888888764
Q ss_pred --ccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccccccccc--ccccccccccCCcccccCC
Q 003046 379 --GPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 379 --~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~~~~ 451 (854)
|+|..++.|.+|+.+++++|+|. .+|+.++.+..|+.|.|++|+|- ++|+.+ +..+..|++..||++.-.+
T Consensus 305 FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 305 FEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred ccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 45556888888889999999988 89999999999999999999998 899887 7888999999999987554
No 440
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.44 E-value=3.1e-14 Score=156.23 Aligned_cols=182 Identities=19% Similarity=0.119 Sum_probs=98.8
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCe--eEeC---
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSW--LQCN--- 336 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~--~~c~--- 336 (854)
+|.+|..|.|++|.+|+||+. +.+|..|+.|+|.-|++....-..+.++..++++..-..+--.- -.| -.|.
T Consensus 195 ~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL--~DG~Fy~l~kme 272 (873)
T KOG4194|consen 195 SLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKL--DDGAFYGLEKME 272 (873)
T ss_pred ccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccc--cCcceeeecccc
Confidence 356889999999999999998 66799999999999998765333444443332221110110000 001 1121
Q ss_pred ----------------CCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcc
Q 003046 337 ----------------SDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 399 (854)
Q Consensus 337 ----------------~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~ 399 (854)
.-+++.|+.|+||+|.|...-++....+.+|++|+||+|+|+.+.++ |..|..|+.|+|++|+
T Consensus 273 ~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Ns 352 (873)
T KOG4194|consen 273 HLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNS 352 (873)
T ss_pred eeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccc
Confidence 01244455555555555544455555555555555555555554443 4555555555555555
Q ss_pred cCCCCCccccCCCCCceeecccccccccccccc-----ccccccccccCCcc
Q 003046 400 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL-----LSKNVVLNYAGNIN 446 (854)
Q Consensus 400 l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l-----~~~l~~l~~~~n~~ 446 (854)
|+..--..|..|++|+.|||++|.|++.|.+.- +..|..|.+.||..
T Consensus 353 i~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNql 404 (873)
T KOG4194|consen 353 IDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQL 404 (873)
T ss_pred hHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCcee
Confidence 553333345555555555555555554444322 44455556666543
No 441
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=1.6e-14 Score=169.51 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=180.9
Q ss_pred hhccccccCcEEEEEEEECC--CcEEEEEEEecCC--ccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEec
Q 003046 530 LEKKIGSGGFGVVYYGKLKD--GKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~--~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+.||+|+|+.|-...... ...+|+|.+.... .........|..+-..+. |+|++.+++.....+..+++.+|.
T Consensus 24 ~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s 103 (601)
T KOG0590|consen 24 LSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYS 103 (601)
T ss_pred ccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcc
Confidence 44569999999998876543 3456666654332 222233444666666676 999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHH-hCCCCceeccCCCCCCeEEcCCC-cEEEEEecccccccC-
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH-TGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVD- 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~- 681 (854)
.++++.+.+.. ......+....-.++.|+..++.|+| .. ++.|+||||+|.+++..+ ..+++|||+|..+..
T Consensus 104 ~g~~~f~~i~~--~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 104 DGGSLFSKISH--PDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccccccccccc--CCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 99999887731 11213445566678999999999999 76 999999999999999999 999999999986554
Q ss_pred -CCcceeecccc-cccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 682 -GASHVSSIVRG-TVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 682 -~~~~~~~~~~g-t~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
+........+| ++.|+|||...+. -.....|+||.|+++.-+++|..|++...... .....|.... +.
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~--~~~~~~~~~~---~~---- 249 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD--GRYSSWKSNK---GR---- 249 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc--ccceeecccc---cc----
Confidence 44444455678 9999999999885 44567899999999999999999987544221 1122222111 00
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... .....++..+++..+|..|.+.+++...
T Consensus 250 ~~~~~~~~~----~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 250 FTQLPWNSI----SDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cccCccccC----ChhhhhcccccccCCchhcccccccccc
Confidence 000111111 2235667778888999999999887654
No 442
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=2.4e-13 Score=140.51 Aligned_cols=203 Identities=23% Similarity=0.329 Sum_probs=143.4
Q ss_pred HhhhcCCCceeeEeeeeeec-----CeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc
Q 003046 575 LLSRIHHRNLVQFLGYCQEE-----GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA 649 (854)
Q Consensus 575 ~l~~l~HpnIv~l~g~~~~~-----~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 649 (854)
-|-++-|.||++++.|+.+. .+..++.|||..|++..+|+........+......+++.||..||.|||+ |.|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence 34455799999999998654 35789999999999999998877777788888888999999999999999 6889
Q ss_pred eeccCCCCCCeEEcCCCcEEEEEeccccccc---CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhC
Q 003046 650 IIHRDLKSSNILLDKHMRAKVSDFGLSKFAV---DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISG 726 (854)
Q Consensus 650 ivHrDIkp~NILl~~~~~~kL~DFGla~~~~---~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG 726 (854)
|+|+++..+-|++..+|-+|++----..... ...........+-++|.+||+-.....+.++|||+||+..+||.-|
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999988874211110000 0001111222367899999998888888999999999999999887
Q ss_pred Ccc-cccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 727 QEA-ISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 727 ~~p-f~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..- -+.........++.. +....+ +. .-...+..|++..|..||+|++++.|
T Consensus 279 Eiq~tnseS~~~~ee~ia~-~i~~le-------------n~-------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIAN-VIIGLE-------------NG-------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eeccCCCcceeehhhhhhh-heeecc-------------Cc-------cccCcCcccccCCCCCCcchhhhhcC
Confidence 642 221111111111110 000000 00 01245678999999999999998866
No 443
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.37 E-value=1.5e-13 Score=151.00 Aligned_cols=199 Identities=15% Similarity=0.089 Sum_probs=139.7
Q ss_pred CceEEEEEECCcccccccccccccccCcceEEeccccccccccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCcc
Q 003046 223 ESRKFRLVLPGQPDVSKAIVNIQENAQGKYRVYEPGYTNLSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSID 301 (854)
Q Consensus 223 ~~R~Fdv~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~ 301 (854)
..|..|.+-|.....+.+.++ .-..++.|+|+.|.++++... +..+..|..|.|+.|++.
T Consensus 150 alrslDLSrN~is~i~~~sfp-------------------~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit 210 (873)
T KOG4194|consen 150 ALRSLDLSRNLISEIPKPSFP-------------------AKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT 210 (873)
T ss_pred hhhhhhhhhchhhcccCCCCC-------------------CCCCceEEeeccccccccccccccccchheeeecccCccc
Confidence 357888888877655544332 113568999999999999887 888999999999999999
Q ss_pred HHHHHHHHhhcCCCCccCCCCCCCCCCCCCee-EeCCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCccccc
Q 003046 302 GVAIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGP 380 (854)
Q Consensus 302 ~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~-~c~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~ 380 (854)
......+|++..+..+... -+- ...+ .-.+.++++|+.|.|..|+|+..-...|..|.++++|+|+.|+++..
T Consensus 211 tLp~r~Fk~L~~L~~LdLn-rN~-----irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~v 284 (873)
T KOG4194|consen 211 TLPQRSFKRLPKLESLDLN-RNR-----IRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAV 284 (873)
T ss_pred ccCHHHhhhcchhhhhhcc-ccc-----eeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhh
Confidence 9999999998776654221 110 1111 12355677777777777777755566677777777777777777765
Q ss_pred CCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccccccccc---ccccccccccCCccc
Q 003046 381 IPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINL 447 (854)
Q Consensus 381 ~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~ 447 (854)
-.. +.+|++|+.|+||+|.|+..-++++.-.++|++|+|++|+|+ .+|++- +..|..|+++.|...
T Consensus 285 n~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 285 NEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred hcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchH
Confidence 554 677777777777777777666777777777777777777777 555544 445566666666543
No 444
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=2.2e-12 Score=146.95 Aligned_cols=139 Identities=23% Similarity=0.287 Sum_probs=99.0
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccc----------------------------------------hhchHH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG----------------------------------------KREFTN 571 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~----------------------------------------~~~~~~ 571 (854)
+.||.|++|.||+|++++|+.||||+.+...... +-+|..
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 5799999999999999999999999986532100 013455
Q ss_pred HHHHhhhcC-----CCceeeEeeee-eecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHH-HHHHHHh
Q 003046 572 EVTLLSRIH-----HRNLVQFLGYC-QEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAK-GIEYLHT 644 (854)
Q Consensus 572 E~~~l~~l~-----HpnIv~l~g~~-~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~ 644 (854)
|++.+.+++ ++++ .+-..+ ......+|||||++|++|.+..... .... .+..++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~---~~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALD---EAGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHH---hcCC---CHHHHHHHHHHHHHHHHHh
Confidence 666555552 3333 322222 2244579999999999998876321 1111 23456666666 4778898
Q ss_pred CCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 645 GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 645 ~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
. |++|+|+||.||+++.+++++++|||++....
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 7 99999999999999999999999999986553
No 445
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.32 E-value=1.8e-13 Score=150.85 Aligned_cols=156 Identities=19% Similarity=0.195 Sum_probs=121.7
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
..+.++.|.|..+.+..+|..+++++.|+.|.+..|++... -..|..+..++....... ....+|++-+.-.+..
T Consensus 30 qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~v-hGELs~Lp~LRsv~~R~N----~LKnsGiP~diF~l~d 104 (1255)
T KOG0444|consen 30 QMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISV-HGELSDLPRLRSVIVRDN----NLKNSGIPTDIFRLKD 104 (1255)
T ss_pred HhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhh-hhhhccchhhHHHhhhcc----ccccCCCCchhccccc
Confidence 35678899999999999999999999999999999987652 112222211111100000 0123344444445678
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|+.||||+|+|+ ..|..+..-+++..|+||+|+|..+|.. |.+|+.|-.||||+|+|. .+|+.+..|..|+.|.|++
T Consensus 105 Lt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~ 182 (1255)
T KOG0444|consen 105 LTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSN 182 (1255)
T ss_pred ceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCC
Confidence 999999999999 9999999999999999999999987766 889999999999999999 8999999999999999999
Q ss_pred cccc
Q 003046 422 NMLS 425 (854)
Q Consensus 422 N~l~ 425 (854)
|+|.
T Consensus 183 NPL~ 186 (1255)
T KOG0444|consen 183 NPLN 186 (1255)
T ss_pred Chhh
Confidence 9774
No 446
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.30 E-value=1.4e-13 Score=145.31 Aligned_cols=163 Identities=21% Similarity=0.210 Sum_probs=107.1
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccH-----HHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDG-----VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~-----~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
..++..+|+++++|+.+..+-.+..|.+..|.+.. ++|..++++ |+|.. -...++-..+.+.+
T Consensus 140 ~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~l-----------d~~~N-~L~tlP~~lg~l~~ 207 (565)
T KOG0472|consen 140 EDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHL-----------DCNSN-LLETLPPELGGLES 207 (565)
T ss_pred hhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhc-----------ccchh-hhhcCChhhcchhh
Confidence 44444555555555555555555555555554432 222222222 33310 11112223345667
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCC-CCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF-SGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|..|+|..|+|. .+| +|..+..|++|+++.|+|+-++.+. .+|.+|..|||..|+|+ ..|+.+.-|.+|..|||++
T Consensus 208 L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSN 284 (565)
T KOG0472|consen 208 LELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSN 284 (565)
T ss_pred hHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccC
Confidence 788888888888 777 7888888888888888888776664 47888888888888888 7888888888888888888
Q ss_pred ccccccccccc--ccccccccccCCccc
Q 003046 422 NMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
|.|+ .+|.++ + .+..|.+.|||--
T Consensus 285 N~is-~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 285 NDIS-SLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred Cccc-cCCcccccc-eeeehhhcCCchH
Confidence 8888 777776 3 6677778888753
No 447
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.21 E-value=5.5e-11 Score=117.91 Aligned_cols=129 Identities=20% Similarity=0.164 Sum_probs=96.3
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCcee-eEeeeeeecCeEEEEEEecCCCCHH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLV-QFLGYCQEEGRSVLVYEFMHNGTLK 610 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv-~l~g~~~~~~~~~lV~e~~~~gsL~ 610 (854)
+.|+.|.++.||+++.. ++.+++|+...... ....+..|+.+++.+.+.+++ +++.+. ....++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 46899999999999876 78899998754322 234578899999998765554 444443 23457999999998775
Q ss_pred HhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC--CCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 611 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC--VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 611 ~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
+.- .....++.+++++|+.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 80 ~~~------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TED------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 420 011245678999999999973 12369999999999999 6789999999875
No 448
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.19 E-value=8.5e-13 Score=124.53 Aligned_cols=153 Identities=23% Similarity=0.266 Sum_probs=121.3
Q ss_pred ccchhhhceeccCCCCCccHHH--HHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEecCCCCcccCCcc
Q 003046 283 LLNAMEINKYLERNDGSIDGVA--IVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNLTGNIPSD 360 (854)
Q Consensus 283 ~i~~le~l~~L~l~~~~~~~~~--~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~Ls~n~l~g~lp~~ 360 (854)
.+-.+++.+.|.|+.|++.+.. +..++.+..+.-|+. ....++.+.+.++.|+.|+++-|+|. .+|..
T Consensus 28 gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nn---------qie~lp~~issl~klr~lnvgmnrl~-~lprg 97 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNN---------QIEELPTSISSLPKLRILNVGMNRLN-ILPRG 97 (264)
T ss_pred cccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccc---------hhhhcChhhhhchhhhheecchhhhh-cCccc
Confidence 3556777888999999988742 334444444444421 12233344556889999999999999 89999
Q ss_pred cccCccCcEEeccCCcccc-cCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccccccccc--cccc
Q 003046 361 LTKLSSLVELWLDGNSLTG-PIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKN 436 (854)
Q Consensus 361 ~~~l~~L~~L~Ls~N~l~~-~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l 436 (854)
|+.++.|+.|||.+|++.+ .+|. |..|+.|+.|+|++|.++ .+|..+++|++|+.|.+.+|.+- ++|.++ +..+
T Consensus 98 fgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~l 175 (264)
T KOG0617|consen 98 FGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRL 175 (264)
T ss_pred cCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHH
Confidence 9999999999999999987 4554 888999999999999999 89999999999999999999999 899988 7778
Q ss_pred ccccccCCccc
Q 003046 437 VVLNYAGNINL 447 (854)
Q Consensus 437 ~~l~~~~n~~~ 447 (854)
+.|.+.||...
T Consensus 176 relhiqgnrl~ 186 (264)
T KOG0617|consen 176 RELHIQGNRLT 186 (264)
T ss_pred HHHhcccceee
Confidence 88888888543
No 449
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.18 E-value=3.9e-12 Score=147.14 Aligned_cols=105 Identities=35% Similarity=0.472 Sum_probs=93.6
Q ss_pred CCCeeEEEecCCCCcccCCc-ccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
.++|+.|+|++|+|. .+|+ .+.+|..|++|+||+|+|+.++..+..++.|++|...+|+|. ..| .+..++.|+.+|
T Consensus 382 ~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lD 458 (1081)
T KOG0618|consen 382 FKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLD 458 (1081)
T ss_pred ccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEe
Confidence 568999999999999 5665 688999999999999999998878999999999999999999 888 899999999999
Q ss_pred ccccccc-cccccccc-cccccccccCCccc
Q 003046 419 VQNNMLS-GTVPSSLL-SKNVVLNYAGNINL 447 (854)
Q Consensus 419 l~~N~l~-g~ip~~l~-~~l~~l~~~~n~~~ 447 (854)
|+.|+|+ +.+|..+- ++|+.|+++||.++
T Consensus 459 lS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 459 LSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred cccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 9999997 34555554 78999999999964
No 450
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.17 E-value=9.8e-11 Score=135.07 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=90.7
Q ss_pred ccccccCcEEEEEEEECC-CcEEEEEEEecCCcc----------------------------------------chhchH
Q 003046 532 KKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQ----------------------------------------GKREFT 570 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~----------------------------------------~~~~~~ 570 (854)
+.||+|++|.||+|++++ |+.||||+++..-.. .+-++.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999987 999999999754110 011344
Q ss_pred HHHHHhhhcC----CCceeeEeeeeee-cCeEEEEEEecCCCCHHHhh--cccccccccccHHHHHHHHHHHHHHHHHHH
Q 003046 571 NEVTLLSRIH----HRNLVQFLGYCQE-EGRSVLVYEFMHNGTLKEHL--YGTLTHEQRINWIKRLEIAEDAAKGIEYLH 643 (854)
Q Consensus 571 ~E~~~l~~l~----HpnIv~l~g~~~~-~~~~~lV~e~~~~gsL~~~L--~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH 643 (854)
.|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+++.+.- .........+.......++.|+ +
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------F 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------H
Confidence 4555555442 3333333333322 44678999999999998742 1110011123322233333333 3
Q ss_pred hCCCCceeccCCCCCCeEEcCCC----cEEEEEeccccccc
Q 003046 644 TGCVPAIIHRDLKSSNILLDKHM----RAKVSDFGLSKFAV 680 (854)
Q Consensus 644 ~~~~~~ivHrDIkp~NILl~~~~----~~kL~DFGla~~~~ 680 (854)
.. |++|+|+||.||+++.++ +++++|||++....
T Consensus 278 ~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 44 999999999999999988 99999999987553
No 451
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.16 E-value=5.8e-13 Score=140.77 Aligned_cols=175 Identities=19% Similarity=0.205 Sum_probs=104.9
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccC--CCCCCCCCCCCCeeEe-----
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQ--EGGDPCLPVPWSWLQC----- 335 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~--~~~dpc~~~~~~~~~c----- 335 (854)
.|..++.|+++.|.++.+||.|+.+|.++.|+.+.|++.. .++++..+..+....- +.--.|.+ +...|
T Consensus 66 nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~-lp~~i~s~~~l~~l~~s~n~~~el~~---~i~~~~~l~d 141 (565)
T KOG0472|consen 66 NLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSE-LPEQIGSLISLVKLDCSSNELKELPD---SIGRLLDLED 141 (565)
T ss_pred cccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhh-ccHHHhhhhhhhhhhccccceeecCc---hHHHHhhhhh
Confidence 3567788999999999999999999999999999998876 3444444433222200 00011100 00001
Q ss_pred -------------CCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCC
Q 003046 336 -------------NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG 402 (854)
Q Consensus 336 -------------~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g 402 (854)
+...+.+|..|++.+|+++ .+|+..-+|+.|++||+..|-+..+||++++|.+|..|+|.+|+|.
T Consensus 142 l~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~- 219 (565)
T KOG0472|consen 142 LDATNNQISSLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR- 219 (565)
T ss_pred hhccccccccCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-
Confidence 0111234455555555555 3444344466666666666666666666666666666666666666
Q ss_pred CCCccccCCCCCceeecccccccccccccccc---ccccccccCCc
Q 003046 403 PLPSSLMNLPNLRELYVQNNMLSGTVPSSLLS---KNVVLNYAGNI 445 (854)
Q Consensus 403 ~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l~~---~l~~l~~~~n~ 445 (854)
.+| +|+.+..|++|+++.|+|. .+|.+.++ .+..|++..|.
T Consensus 220 ~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNk 263 (565)
T KOG0472|consen 220 FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNK 263 (565)
T ss_pred cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccc
Confidence 555 5666666666666666666 66666643 34566666664
No 452
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.16 E-value=4e-11 Score=134.81 Aligned_cols=253 Identities=21% Similarity=0.201 Sum_probs=178.2
Q ss_pred HHHHHHHHhhccccc--cCcEEEEEEEE--C-CCcEEEEEEEecC--CccchhchHHHHHHhhhc-CCCceeeEeeeeee
Q 003046 522 DIEDATKMLEKKIGS--GGFGVVYYGKL--K-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE 593 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~--G~fg~Vy~~~~--~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~ 593 (854)
+..+....+.+.+|. |.+|.+|.+.. . ++..+|+|.-+.. .......=.+|+...+++ .|+|.++....+..
T Consensus 110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc
Confidence 344445556788999 99999999987 3 6788999874322 122222334566666666 49999999999999
Q ss_pred cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHH----HHHHHHhCCCCceeccCCCCCCeEEcCC-CcE
Q 003046 594 EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAK----GIEYLHTGCVPAIIHRDLKSSNILLDKH-MRA 668 (854)
Q Consensus 594 ~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~ 668 (854)
.+..++-.|++. .+|.++.+.. ...++....+.+..+..+ ||.++|.. .++|-|+||.||++..+ ...
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~~---~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~ 262 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHTP---CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSC 262 (524)
T ss_pred CCcceeeecccc-chhHHhhhcc---cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccccee
Confidence 999999999885 6887777532 233455566667777777 99999998 99999999999999999 899
Q ss_pred EEEEecccccccCCCcce----eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH
Q 003046 669 KVSDFGLSKFAVDGASHV----SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 744 (854)
Q Consensus 669 kL~DFGla~~~~~~~~~~----~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~ 744 (854)
+++|||+...+.+..-.. .....|...|++||... +-++.+.|+|++|.+..+..+|..+...... ..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-------~~ 334 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-------SS 334 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-------CC
Confidence 999999988766554221 22235788999999875 4568899999999999999998876543321 01
Q ss_pred HHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 745 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 745 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
|.. .+.+. +..++...-..++...+.++++.+|..|++...+..+
T Consensus 335 W~~--~r~~~--------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 335 WSQ--LRQGY--------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ccc--ccccc--------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 211 11111 1111111112234458889999999999988877654
No 453
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.14 E-value=5.8e-10 Score=126.53 Aligned_cols=165 Identities=19% Similarity=0.246 Sum_probs=123.4
Q ss_pred CCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHH
Q 003046 548 KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIK 627 (854)
Q Consensus 548 ~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~ 627 (854)
.++.+|.|++.+...........+.++.|+.++||||++++.....++..|+|+|.+. .|..++.. +....
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~~~~ 105 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LGKEE 105 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hHHHH
Confidence 3688999988876554444557788899999999999999999999999999999885 46666632 22344
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccCcC
Q 003046 628 RLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQL 707 (854)
Q Consensus 628 ~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 707 (854)
....+.||+.||.+||..| +++|++|...-|+|+..|+.||++|.++........ ......---.|..|+.+....
T Consensus 106 v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc-
Confidence 5567899999999999775 899999999999999999999999988753322111 011111122455666543222
Q ss_pred CCcchhhhHHHHHHHHHhC
Q 003046 708 TDKSDVYSFGVILLELISG 726 (854)
Q Consensus 708 s~~sDVwS~Gvvl~elltG 726 (854)
-..|.|.|||+++|++.|
T Consensus 182 -~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 -WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -cchhhhhHHHHHHHHhCc
Confidence 346999999999999999
No 454
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.11 E-value=1.3e-11 Score=130.56 Aligned_cols=90 Identities=26% Similarity=0.266 Sum_probs=62.7
Q ss_pred cccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccccccccc---cccc
Q 003046 361 LTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKN 436 (854)
Q Consensus 361 ~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l---~~~l 436 (854)
|.+|++|+.|+|++|+|+++-+. |.++..|+.|.|..|+|...--..|.++.+|+.|+|.+|+|+ .+-... +..+
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it-~~~~~aF~~~~~l 348 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQIT-TVAPGAFQTLFSL 348 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeE-EEeccccccccee
Confidence 45667777777777777776665 777777777777777777544556777777888888888887 444333 3345
Q ss_pred ccccccCCcccccCC
Q 003046 437 VVLNYAGNINLHEGG 451 (854)
Q Consensus 437 ~~l~~~~n~~~~~~~ 451 (854)
..|++.+||+.|++.
T Consensus 349 ~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 349 STLNLLSNPFNCNCR 363 (498)
T ss_pred eeeehccCcccCccc
Confidence 667778888888764
No 455
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.10 E-value=8.7e-10 Score=110.98 Aligned_cols=135 Identities=19% Similarity=0.192 Sum_probs=96.1
Q ss_pred ccccccCcEEEEEEEECC-------CcEEEEEEEecCCc--c--------c------------hhc----hHHHHHHhhh
Q 003046 532 KKIGSGGFGVVYYGKLKD-------GKEIAVKVLTSNSY--Q--------G------------KRE----FTNEVTLLSR 578 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~-------~~~vAvK~l~~~~~--~--------~------------~~~----~~~E~~~l~~ 578 (854)
..||.|.=+.||.|...+ +..+|||+.+.... . . .+. .++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997553 47999998763210 0 0 111 2379999999
Q ss_pred cCC--CceeeEeeeeeecCeEEEEEEecCCCCHHH-hhcccccccccccHHHHHHHHHHHHHHHHHH-HhCCCCceeccC
Q 003046 579 IHH--RNLVQFLGYCQEEGRSVLVYEFMHNGTLKE-HLYGTLTHEQRINWIKRLEIAEDAAKGIEYL-HTGCVPAIIHRD 654 (854)
Q Consensus 579 l~H--pnIv~l~g~~~~~~~~~lV~e~~~~gsL~~-~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrD 654 (854)
+.. -++...+++ ...++||||+.+..+.. .+. ...++..+...+..+++.+|..| |+. +++|||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 853 455566654 45689999998753321 121 11233445567789999999999 777 999999
Q ss_pred CCCCCeEEcCCCcEEEEEecccccc
Q 003046 655 LKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 655 Ikp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|++.|||++ ++.+.|+|||.+...
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999997 468999999988644
No 456
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.08 E-value=3.5e-10 Score=135.01 Aligned_cols=96 Identities=32% Similarity=0.422 Sum_probs=46.4
Q ss_pred CeeEEEecCCCCcccCCcccccC-----------------ccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCC
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKL-----------------SSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL 404 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l-----------------~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~ 404 (854)
+|+.|+|++|+|+ .+|....+| .+|+.|+|++|+|+++++. .++|+.|+|++|+|+ .+
T Consensus 343 ~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~LdLs~N~Lt~LP~l---~s~L~~LdLS~N~Ls-sI 417 (788)
T PRK15387 343 GLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVL---PSELKELMVSGNRLT-SL 417 (788)
T ss_pred ccceEecCCCccC-CCCCCCcccceehhhccccccCcccccccceEEecCCcccCCCCc---ccCCCEEEccCCcCC-CC
Confidence 5667777777776 455422111 1334444444444432221 134445555555554 34
Q ss_pred CccccCCCCCceeecccccccccccccc--ccccccccccCCcc
Q 003046 405 PSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 405 p~~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~ 446 (854)
|..+ .+|+.|+|++|+|+ .+|..+ +..+..|++++|+.
T Consensus 418 P~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~L 457 (788)
T PRK15387 418 PMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 457 (788)
T ss_pred Ccch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCC
Confidence 4321 24455555555555 555554 44555666666653
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.05 E-value=1.2e-11 Score=136.28 Aligned_cols=103 Identities=24% Similarity=0.342 Sum_probs=89.6
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
-|+.|-+++|+|+ .+|..|+.+..|..||.+.|+|..+++.+++|.+|+.|.+..|++. .+|+.++.| .|..||+++
T Consensus 144 pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfSc 220 (722)
T KOG0532|consen 144 PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSC 220 (722)
T ss_pred cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeeccc
Confidence 4888999999999 8999999889999999999999988888999999999999999988 788888866 588899999
Q ss_pred ccccccccccc--ccccccccccCCcccc
Q 003046 422 NMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~~l~~~~n~~~~ 448 (854)
|+++ .||.++ +..|+.|.+.+||...
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCCC
Confidence 9998 899888 7778888888888654
No 458
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=2.4e-09 Score=104.15 Aligned_cols=131 Identities=24% Similarity=0.404 Sum_probs=102.0
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCcc--------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
..+++|+-+.+|.+.+. |.++++|.-.+.... ....-.+|+.++.+++--.|..-+-+..+.....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999876 455667754333211 123456799999999876666666667777888999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
++|..|.+.+... ...++..+-.-+.-||.. +|+|+||.++||++..+. +.++||||+..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888432 245777888888999999 999999999999998765 99999999863
No 459
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.02 E-value=2.4e-09 Score=110.88 Aligned_cols=142 Identities=18% Similarity=0.335 Sum_probs=108.1
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCc-cchhchHHHHHHhhhcCC--CceeeEeeeeeec---CeEEEEEEecC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHH--RNLVQFLGYCQEE---GRSVLVYEFMH 605 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H--pnIv~l~g~~~~~---~~~~lV~e~~~ 605 (854)
+.||.|.++.||++...+|+.+++|+...... .....+..|+++++.+++ .++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999887778999998754322 235678899999999976 3456777777654 35689999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC--------------------------------------- 646 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------- 646 (854)
+.++.+.+.. ..++...+..++.+++++|..||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888765421 23556667777888888888888521
Q ss_pred --------------CCceeccCCCCCCeEEcC--CCcEEEEEeccccc
Q 003046 647 --------------VPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKF 678 (854)
Q Consensus 647 --------------~~~ivHrDIkp~NILl~~--~~~~kL~DFGla~~ 678 (854)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998753
No 460
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.99 E-value=5.8e-10 Score=133.80 Aligned_cols=159 Identities=21% Similarity=0.240 Sum_probs=91.6
Q ss_pred ceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeE
Q 003046 266 FVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITV 345 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~ 345 (854)
+|+.|+|..|.++.+|..+. ..|+.|++++|.+... +..+.. .+..+.. ..+ ....++- .-.++|+.
T Consensus 221 nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~L~~L-P~~l~s--~L~~L~L---s~N---~L~~LP~--~l~~sL~~ 287 (754)
T PRK15370 221 NIKTLYANSNQLTSIPATLP--DTIQEMELSINRITEL-PERLPS--ALQSLDL---FHN---KISCLPE--NLPEELRY 287 (754)
T ss_pred CCCEEECCCCccccCChhhh--ccccEEECcCCccCcC-ChhHhC--CCCEEEC---cCC---ccCcccc--ccCCCCcE
Confidence 45666666666666665432 2456666666665432 111111 1111110 000 0011110 01135677
Q ss_pred EEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccc
Q 003046 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 346 L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
|+|++|+|+ .+|..+. ++|+.|+|++|+|+.+++.+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+
T Consensus 288 L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 288 LSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTALPETLP--PGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT 359 (754)
T ss_pred EECCCCccc-cCcccch--hhHHHHHhcCCccccCCcccc--ccceeccccCCccc-cCChhhc--CcccEEECCCCCCC
Confidence 777777776 4555443 366677777777766544332 57788888888887 4676664 57888888888888
Q ss_pred cccccccccccccccccCCcc
Q 003046 426 GTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 426 g~ip~~l~~~l~~l~~~~n~~ 446 (854)
.+|..+...++.|++++|..
T Consensus 360 -~LP~~lp~~L~~LdLs~N~L 379 (754)
T PRK15370 360 -VLPETLPPTITTLDVSRNAL 379 (754)
T ss_pred -cCChhhcCCcCEEECCCCcC
Confidence 77877777788888887753
No 461
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.98 E-value=1.4e-09 Score=130.50 Aligned_cols=161 Identities=20% Similarity=0.226 Sum_probs=118.5
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCee
Q 003046 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 344 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~ 344 (854)
..|+.|+|+.|.++.+|+.+. ..|+.|+++.|++... +..+. ..+..+.. .-|. ...++ ..-.++|+
T Consensus 241 ~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~L~~L-P~~l~--~sL~~L~L---s~N~---Lt~LP--~~lp~sL~ 307 (754)
T PRK15370 241 DTIQEMELSINRITELPERLP--SALQSLDLFHNKISCL-PENLP--EELRYLSV---YDNS---IRTLP--AHLPSGIT 307 (754)
T ss_pred ccccEEECcCCccCcCChhHh--CCCCEEECcCCccCcc-ccccC--CCCcEEEC---CCCc---cccCc--ccchhhHH
Confidence 468899999999999998764 4789999999988742 22121 12222211 1110 11111 01124789
Q ss_pred EEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccc
Q 003046 345 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 345 ~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 424 (854)
.|+|++|+|+ .+|..+. ++|+.|++++|+|++++..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|
T Consensus 308 ~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~L 379 (754)
T PRK15370 308 HLNVQSNSLT-ALPETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNAL 379 (754)
T ss_pred HHHhcCCccc-cCCcccc--ccceeccccCCccccCChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcC
Confidence 9999999999 6787654 689999999999998765554 79999999999999 6888764 6899999999999
Q ss_pred ccccccccccccccccccCCccc
Q 003046 425 SGTVPSSLLSKNVVLNYAGNINL 447 (854)
Q Consensus 425 ~g~ip~~l~~~l~~l~~~~n~~~ 447 (854)
+ .+|..+...++.|++++|...
T Consensus 380 t-~LP~~l~~sL~~LdLs~N~L~ 401 (754)
T PRK15370 380 T-NLPENLPAALQIMQASRNNLV 401 (754)
T ss_pred C-CCCHhHHHHHHHHhhccCCcc
Confidence 9 899988878889999988643
No 462
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.95 E-value=7.3e-09 Score=100.12 Aligned_cols=140 Identities=26% Similarity=0.305 Sum_probs=104.7
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCc--------cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
..|-||+-+.|+++.+. |+...||.-..... -..+...+|+++|.+++--.|.--.-++.+...-.++|||
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 56889999999999987 77777775432211 1245677899999999866666555566677777899999
Q ss_pred cCC-CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC---cEEEEEecccc
Q 003046 604 MHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSK 677 (854)
Q Consensus 604 ~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~~kL~DFGla~ 677 (854)
+++ .++.+++....... ........++..|-+.+.-||.. .|+||||..+||++..++ .+.++|||++.
T Consensus 92 ~~g~~~vk~~i~~~~~~~--~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 92 IDGASTVKDFILSTMEDE--SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred ccchhHHHHHHHHHccCc--ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 976 47888886543221 12222357888999999999999 999999999999997664 45899999975
No 463
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.94 E-value=1.5e-09 Score=129.60 Aligned_cols=84 Identities=31% Similarity=0.345 Sum_probs=72.5
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecc
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 420 (854)
.+|+.|+|++|+|+ .+|... ++|+.|+|++|+|+++|.. ..+|+.|+|++|+|+ .+|..++++++|+.|+|+
T Consensus 382 ~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~LssIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 382 SGLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLTSLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred cccceEEecCCccc-CCCCcc---cCCCEEEccCCcCCCCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 47899999999999 577543 6899999999999985532 357889999999999 899999999999999999
Q ss_pred cccccccccccc
Q 003046 421 NNMLSGTVPSSL 432 (854)
Q Consensus 421 ~N~l~g~ip~~l 432 (854)
+|+|+|.+|..+
T Consensus 454 ~N~Ls~~~~~~L 465 (788)
T PRK15387 454 GNPLSERTLQAL 465 (788)
T ss_pred CCCCCchHHHHH
Confidence 999998888765
No 464
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.94 E-value=8.6e-11 Score=136.25 Aligned_cols=173 Identities=22% Similarity=0.294 Sum_probs=103.9
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCee
Q 003046 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 344 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~ 344 (854)
..+..+++++|.++.+|..+.++..|+.|+.+.|.+.. .+..+.....+..... --| ..+-+.-...++.+|+
T Consensus 241 ~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~-lp~ri~~~~~L~~l~~---~~n---el~yip~~le~~~sL~ 313 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLSNLPEWIGACANLEALNANHNRLVA-LPLRISRITSLVSLSA---AYN---ELEYIPPFLEGLKSLR 313 (1081)
T ss_pred ccceeeecchhhhhcchHHHHhcccceEecccchhHHh-hHHHHhhhhhHHHHHh---hhh---hhhhCCCcccccceee
Confidence 35788999999999999889999999999999999844 3333333322222100 000 0011111123355677
Q ss_pred EEEecCCCCcccCCcccc--------------------------cCccCcEEeccCCcccc-cCCCCCCCCCccEEEcCC
Q 003046 345 VIHLSSKNLTGNIPSDLT--------------------------KLSSLVELWLDGNSLTG-PIPDFSGCPDLRIIHLED 397 (854)
Q Consensus 345 ~L~Ls~n~l~g~lp~~~~--------------------------~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~ 397 (854)
+|+|..|+|. .+|+.+. .+..|+.|+|.+|.|+. ..|-+-+.++|+.|+|++
T Consensus 314 tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsy 392 (1081)
T KOG0618|consen 314 TLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSY 392 (1081)
T ss_pred eeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecc
Confidence 8888888877 5665331 12345666666666665 345566666777777777
Q ss_pred cccCCCCCc-cccCCCCCceeecccccccccccccc--ccccccccccCCccc
Q 003046 398 NQLTGPLPS-SLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 398 N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
|+|. .+|. .+.+|..|++|+||+|+|+ .+|..+ +..|.+|...+|...
T Consensus 393 NrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~ 443 (1081)
T KOG0618|consen 393 NRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL 443 (1081)
T ss_pred cccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee
Confidence 7776 4554 4566666777777777776 666555 334444444444333
No 465
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.91 E-value=6.6e-10 Score=109.69 Aligned_cols=102 Identities=32% Similarity=0.516 Sum_probs=40.7
Q ss_pred CCeeEEEecCCCCcccCCcccc-cCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccc-cCCCCCceee
Q 003046 341 PSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSL-MNLPNLRELY 418 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~ 418 (854)
.+++.|+|++|+|+ .+. .++ .|.+|+.|+|++|+|+. ++.+..|++|+.|+|++|+|+ .+.+.+ ..+++|+.|+
T Consensus 19 ~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 19 VKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-LEGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-ccCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 37899999999999 564 576 58999999999999996 457889999999999999999 566555 4689999999
Q ss_pred cccccccccccc----ccccccccccccCCccc
Q 003046 419 VQNNMLSGTVPS----SLLSKNVVLNYAGNINL 447 (854)
Q Consensus 419 l~~N~l~g~ip~----~l~~~l~~l~~~~n~~~ 447 (854)
|++|+|. .+-. .-+++|..|++.|||..
T Consensus 95 L~~N~I~-~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKIS-DLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS----SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCC-ChHHhHHHHcCCCcceeeccCCccc
Confidence 9999998 4433 22778899999999974
No 466
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.85 E-value=2e-10 Score=126.77 Aligned_cols=157 Identities=18% Similarity=0.250 Sum_probs=119.4
Q ss_pred ceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCc-cCCCCCCCCCCCCCeeEeCCCCCCCee
Q 003046 266 FVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADW-AQEGGDPCLPVPWSWLQCNSDPQPSIT 344 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~-~~~~~dpc~~~~~~~~~c~~~~~~~L~ 344 (854)
+|..+.|..|.+..+|+.|..++.|++|+++.|++...+ ..+..+ .++-+ ..++.--|+|- ..+.++.|.
T Consensus 99 ~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp-~~lC~l-pLkvli~sNNkl~~lp~-------~ig~~~tl~ 169 (722)
T KOG0532|consen 99 SLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLP-DGLCDL-PLKVLIVSNNKLTSLPE-------EIGLLPTLA 169 (722)
T ss_pred HHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCC-hhhhcC-cceeEEEecCccccCCc-------ccccchhHH
Confidence 456677778888888888888888888888877765421 122222 11110 00011222221 122467899
Q ss_pred EEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccc
Q 003046 345 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 345 ~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 424 (854)
.||.+.|+|. .+|..++.|.+|+.|.+..|++..+|+++.. -.|..||+|.|+++ .+|-.|.+|+.|++|-|.+|.|
T Consensus 170 ~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 170 HLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCS-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred Hhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhC-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCC
Confidence 9999999999 8999999999999999999999999999884 46899999999999 9999999999999999999999
Q ss_pred ccccccccccc
Q 003046 425 SGTVPSSLLSK 435 (854)
Q Consensus 425 ~g~ip~~l~~~ 435 (854)
+ +.|..++.+
T Consensus 247 q-SPPAqIC~k 256 (722)
T KOG0532|consen 247 Q-SPPAQICEK 256 (722)
T ss_pred C-CChHHHHhc
Confidence 9 899888543
No 467
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.83 E-value=7.4e-08 Score=106.27 Aligned_cols=169 Identities=21% Similarity=0.307 Sum_probs=131.1
Q ss_pred EEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeee----ecCeEEEEEEecCC-CCHHHhh
Q 003046 540 GVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ----EEGRSVLVYEFMHN-GTLKEHL 613 (854)
Q Consensus 540 g~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~----~~~~~~lV~e~~~~-gsL~~~L 613 (854)
.+.||+... +|..+++|+++.+..........-+++++++.|.|+|++.+++. .+..+++||+|.++ ++|.+.-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 588999766 89999999996554444444456788999999999999999886 35578999999886 5777765
Q ss_pred cccc-----------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 614 YGTL-----------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 614 ~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
+... ..+..+++...+.++.|+..||.++|+. |+.-+-+.+++||++.+.+++|+..|.......+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 4321 2344577889999999999999999998 9999999999999999999999888876554332
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEA 729 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~p 729 (854)
.. |.+.+ -.+-|.-.||.+++.|.||..-
T Consensus 447 ~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 447 PT---------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CC---------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 20 11211 2367888999999999999654
No 468
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=5.4e-09 Score=84.87 Aligned_cols=59 Identities=37% Similarity=0.573 Sum_probs=34.2
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCccc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQL 400 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l 400 (854)
+|+.|+|++|+|+...+..|.++++|++|+|++|+|+.+++. |.+|++|++|+|++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 566666666666633334555566666666666666655554 55566666666666554
No 469
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.5e-09 Score=85.96 Aligned_cols=60 Identities=45% Similarity=0.608 Sum_probs=56.0
Q ss_pred ccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccc
Q 003046 365 SSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 365 ~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 424 (854)
++|+.|+|++|+|+.++++ |.++++|++|++++|+|+...|..|.+|++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4799999999999999886 89999999999999999977778999999999999999986
No 470
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.79 E-value=1.1e-09 Score=116.24 Aligned_cols=87 Identities=26% Similarity=0.363 Sum_probs=82.1
Q ss_pred CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCcee
Q 003046 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 417 (854)
.+++|+.|+|++|+|++.-+.+|..+..|++|.|..|+|...-.. |.+|..|+.|+|.+|+|+-.-|.+|..+..|..|
T Consensus 272 ~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l 351 (498)
T KOG4237|consen 272 KLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTL 351 (498)
T ss_pred hcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeee
Confidence 479999999999999998899999999999999999999977665 8999999999999999999999999999999999
Q ss_pred eccccccc
Q 003046 418 YVQNNMLS 425 (854)
Q Consensus 418 ~l~~N~l~ 425 (854)
+|-.|++.
T Consensus 352 ~l~~Np~~ 359 (498)
T KOG4237|consen 352 NLLSNPFN 359 (498)
T ss_pred ehccCccc
Confidence 99999987
No 471
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.78 E-value=5e-09 Score=118.13 Aligned_cols=241 Identities=21% Similarity=0.199 Sum_probs=165.3
Q ss_pred hccccccCcEEEEEEEEC--CCcEEEEEEEecCCccc--hhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecC
Q 003046 531 EKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNSYQG--KREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~~~~~--~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
...||.|.|+.|++...+ ++..+++|.+....... +..-..|+.+...+ .|.+++.....+..-...++=-||++
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~ 349 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCE 349 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhc
Confidence 567999999999988644 57788999876543322 22234566666665 47777776666655566678889999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEecccccccCCCc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~~~~~~ 684 (854)
++++...+ .-...++...++++..|++.++.++|+. .++|+|+||+||++..+ +..+++|||++..+.-.
T Consensus 350 ~~s~~l~~----~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~-- 420 (524)
T KOG0601|consen 350 GGSSSLRS----VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS-- 420 (524)
T ss_pred Ccchhhhh----HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccccee--
Confidence 99887665 2244567777888999999999999987 99999999999999986 78899999988532110
Q ss_pred ceeeccccccccc--CccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 685 HVSSIVRGTVGYL--DPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 685 ~~~~~~~gt~~Y~--aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
... ....-++. +++......+-.+.|++|||.-+.|..+|...-+.. .+|.. +..+.+ +.
T Consensus 421 -~~~-~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~---------~~~~~--i~~~~~-----p~ 482 (524)
T KOG0601|consen 421 -SGV-FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG---------VQSLT--IRSGDT-----PN 482 (524)
T ss_pred -ccc-ccccccccccchhhccccccccccccccccccccccccCcccCccc---------cccee--eecccc-----cC
Confidence 011 11223334 555555677888999999999999999887532211 11111 111111 01
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+. .. ...+..++..+..+++..||.+.+...+.+..
T Consensus 483 ~~----~~-~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 483 LP----GL-KLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred CC----ch-HHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 11 11 14466777888999999999999887776543
No 472
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.76 E-value=5.4e-08 Score=97.68 Aligned_cols=125 Identities=26% Similarity=0.312 Sum_probs=81.1
Q ss_pred EEEEEEECCCcEEEEEEEecCCcc--------------------------chhchHHHHHHhhhcCCC--ceeeEeeeee
Q 003046 541 VVYYGKLKDGKEIAVKVLTSNSYQ--------------------------GKREFTNEVTLLSRIHHR--NLVQFLGYCQ 592 (854)
Q Consensus 541 ~Vy~~~~~~~~~vAvK~l~~~~~~--------------------------~~~~~~~E~~~l~~l~Hp--nIv~l~g~~~ 592 (854)
.||.|...+|..+|||+.+..... ......+|.+.|.++... ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999988999999987642100 012356799999999765 455555442
Q ss_pred ecCeEEEEEEecC--CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHH-HhCCCCceeccCCCCCCeEEcCCCcEE
Q 003046 593 EEGRSVLVYEFMH--NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYL-HTGCVPAIIHRDLKSSNILLDKHMRAK 669 (854)
Q Consensus 593 ~~~~~~lV~e~~~--~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDIkp~NILl~~~~~~k 669 (854)
..++||||++ |..+..+... .++......++.+++..+..+ |.. ||+|||+.+.|||++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDV------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHC------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHhc------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999998 5555433211 111334556778888866664 676 99999999999999988 999
Q ss_pred EEEecccccc
Q 003046 670 VSDFGLSKFA 679 (854)
Q Consensus 670 L~DFGla~~~ 679 (854)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988543
No 473
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.73 E-value=2.7e-08 Score=127.23 Aligned_cols=174 Identities=21% Similarity=0.158 Sum_probs=98.0
Q ss_pred ccceeeeecccCC-CCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 264 LPFVLSFKFGKTY-DSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~L~~n~-~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
++.|+.|+|..+. +..+ |.+..+..|+.|++.+|..-...+..++.+..+..+.. .-|.. ...++.. .++++
T Consensus 633 l~~Lk~L~Ls~~~~l~~i-p~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L---~~c~~--L~~Lp~~-i~l~s 705 (1153)
T PLN03210 633 LTGLRNIDLRGSKNLKEI-PDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM---SRCEN--LEILPTG-INLKS 705 (1153)
T ss_pred CCCCCEEECCCCCCcCcC-CccccCCcccEEEecCCCCccccchhhhccCCCCEEeC---CCCCC--cCccCCc-CCCCC
Confidence 4455555555433 3333 33555555566666554433333444555544444311 11210 0111111 13445
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCC------------------------------CCCCCccE
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF------------------------------SGCPDLRI 392 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~------------------------------~~l~~L~~ 392 (854)
|+.|+|++|...+.+|.. +++|+.|+|++|.|..+++.+ ..+++|+.
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~ 782 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTR 782 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchh
Confidence 555555555444444432 245556666666655443321 11357888
Q ss_pred EEcCCcccCCCCCccccCCCCCceeecccccccccccccc-ccccccccccCCccc
Q 003046 393 IHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL-LSKNVVLNYAGNINL 447 (854)
Q Consensus 393 L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l-~~~l~~l~~~~n~~~ 447 (854)
|+|++|...+.+|.++++|++|+.|+|++|...+.+|..+ +.+++.|++++|..+
T Consensus 783 L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L 838 (1153)
T PLN03210 783 LFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRL 838 (1153)
T ss_pred eeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCcc
Confidence 8888888777899999999999999999876444888776 677888888887655
No 474
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.71 E-value=1e-08 Score=116.37 Aligned_cols=174 Identities=25% Similarity=0.295 Sum_probs=132.2
Q ss_pred ccceeeeecccCCCCCCCcccchhh-hceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAME-INKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le-~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
++.+..|++..|.++.+||.+..+. .|+.|+++.|++.... ..++.+..+..+.... | .+..+.-....++.
T Consensus 115 ~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~---N---~l~~l~~~~~~~~~ 187 (394)
T COG4886 115 LTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSF---N---DLSDLPKLLSNLSN 187 (394)
T ss_pred ccceeEEecCCcccccCccccccchhhcccccccccchhhhh-hhhhccccccccccCC---c---hhhhhhhhhhhhhh
Confidence 3567889999999999999999995 9999999999988741 3344444444432111 1 11222211115678
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
|+.|++++|+++ .+|..+..+..|++|++++|.+...+..+..+.+|..|.+++|++. .++..++.+++|+.|++++|
T Consensus 188 L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n 265 (394)
T COG4886 188 LNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNN 265 (394)
T ss_pred hhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccchhccccccceeccccc
Confidence 999999999999 8998888888899999999987767777888999999999999998 56888999999999999999
Q ss_pred cccccccccc-ccccccccccCCccc
Q 003046 423 MLSGTVPSSL-LSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~g~ip~~l-~~~l~~l~~~~n~~~ 447 (854)
+++ .++... +.++..|++++|...
T Consensus 266 ~i~-~i~~~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 266 QIS-SISSLGSLTNLRELDLSGNSLS 290 (394)
T ss_pred ccc-ccccccccCccCEEeccCcccc
Confidence 999 777622 567788888888654
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.67 E-value=1.3e-08 Score=100.64 Aligned_cols=134 Identities=21% Similarity=0.256 Sum_probs=46.6
Q ss_pred ccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEecCCC
Q 003046 273 GKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKN 352 (854)
Q Consensus 273 ~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~Ls~n~ 352 (854)
..+-+...|-..|.. .++.|+|.+|.+..+ + +.+. .+.+|+.|+|++|+
T Consensus 5 t~~~i~~~~~~~n~~-~~~~L~L~~n~I~~I--e--------------~L~~--------------~l~~L~~L~Ls~N~ 53 (175)
T PF14580_consen 5 TANMIEQIAQYNNPV-KLRELNLRGNQISTI--E--------------NLGA--------------TLDKLEVLDLSNNQ 53 (175)
T ss_dssp ------------------------------------------------S--T--------------T-TT--EEE-TTS-
T ss_pred ccccccccccccccc-ccccccccccccccc--c--------------chhh--------------hhcCCCEEECCCCC
Confidence 344444444444444 568888888877651 1 0111 23579999999999
Q ss_pred CcccCCcccccCccCcEEeccCCcccccCCCC-CCCCCccEEEcCCcccCCCCC--ccccCCCCCceeeccccccccccc
Q 003046 353 LTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF-SGCPDLRIIHLEDNQLTGPLP--SSLMNLPNLRELYVQNNMLSGTVP 429 (854)
Q Consensus 353 l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~g~ip 429 (854)
|+ .++ .+..|++|+.|+|++|+|+.+.+.+ ..+++|+.|+|++|+|.. +- ..+..|++|+.|+|.+|+++ .-+
T Consensus 54 I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~-l~~l~~L~~l~~L~~L~L~~NPv~-~~~ 129 (175)
T PF14580_consen 54 IT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISD-LNELEPLSSLPKLRVLSLEGNPVC-EKK 129 (175)
T ss_dssp -S---T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS---S-CCCCGGGGG-TT--EEE-TT-GGG-GST
T ss_pred Cc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCC-hHHhHHHHcCCCcceeeccCCccc-chh
Confidence 99 665 5888999999999999999765555 358999999999999873 22 35778899999999999998 444
Q ss_pred ccc------ccccccccc
Q 003046 430 SSL------LSKNVVLNY 441 (854)
Q Consensus 430 ~~l------~~~l~~l~~ 441 (854)
.-- ++.++.|+.
T Consensus 130 ~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 130 NYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp THHHHHHHH-TT-SEETT
T ss_pred hHHHHHHHHcChhheeCC
Confidence 311 455555553
No 476
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.63 E-value=3.5e-07 Score=97.34 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=98.3
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCcc-----------chhchHHHHHHhhhcCCCce--eeEeeeeee-----
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNL--VQFLGYCQE----- 593 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~HpnI--v~l~g~~~~----- 593 (854)
+.+-.-....|.+..+. |+.+.||........ ....+.+|...+.++...+| ...+++...
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 33443444456677664 788999976433211 01137789999888854333 344555533
Q ss_pred cCeEEEEEEecCCC-CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-------C
Q 003046 594 EGRSVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------H 665 (854)
Q Consensus 594 ~~~~~lV~e~~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-------~ 665 (854)
....++|+|++++- +|.+++.... ....+...+..++.+++..+.-||.. ||+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23578999999886 8988874321 12334556678999999999999999 9999999999999985 4
Q ss_pred CcEEEEEecccc
Q 003046 666 MRAKVSDFGLSK 677 (854)
Q Consensus 666 ~~~kL~DFGla~ 677 (854)
+.+.++||+.++
T Consensus 182 ~~~~LIDl~r~~ 193 (268)
T PRK15123 182 LKLSVIDLHRAQ 193 (268)
T ss_pred ceEEEEECCccc
Confidence 689999999875
No 477
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.61 E-value=6.7e-09 Score=122.65 Aligned_cols=241 Identities=18% Similarity=0.184 Sum_probs=155.4
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+-+|.++.++.+.-. .|.-.++|+..... ....+....+-.++-..+||-++...--+.......||++|..++
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 46778999988877543 23333444332221 111122223333333345677776555555667789999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc---CCC-
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV---DGA- 683 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~---~~~- 683 (854)
+|...|+..- ..+..........+.++++|||.. .+.|+|++|.|+|...++..+++|||...... ...
T Consensus 890 ~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~ 962 (1205)
T KOG0606|consen 890 DLPSKLHNSG----CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTD 962 (1205)
T ss_pred CchhhhhcCC----CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCcCC
Confidence 9998886432 233333344566778899999997 68999999999999999999999998432110 000
Q ss_pred --------------------c------ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccc
Q 003046 684 --------------------S------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA 737 (854)
Q Consensus 684 --------------------~------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~ 737 (854)
. .......||+.|.+||...+......+|.|+.|++++|.++|..||.....+.
T Consensus 963 ~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~ 1042 (1205)
T KOG0606|consen 963 LSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ 1042 (1205)
T ss_pred cccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh
Confidence 0 01223458999999999999999999999999999999999999998776444
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSIS 794 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~ 794 (854)
..+++....-.+ .....+......+++..-+..+|.+|-.|.
T Consensus 1043 ~f~ni~~~~~~~---------------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1043 IFENILNRDIPW---------------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhccccCCCCC---------------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 443332210000 011111112334555566677777777665
No 478
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.60 E-value=1.6e-08 Score=110.95 Aligned_cols=156 Identities=18% Similarity=0.212 Sum_probs=100.4
Q ss_pred ccceeeeecccCCCCC-CCcccchhhh---ceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCC
Q 003046 264 LPFVLSFKFGKTYDSS-RGPLLNAMEI---NKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDP 339 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~-lpP~i~~le~---l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~ 339 (854)
+..|+.|+|..|.++. .++.+.++.. |+.|+++.|.+...++..+.... ..
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l-------------------------~~ 134 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGL-------------------------KD 134 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHH-------------------------Hh
Confidence 4567778888777763 4444666666 78888887777644444332210 01
Q ss_pred -CCCeeEEEecCCCCccc----CCcccccCccCcEEeccCCccccc-----CCCCCCCCCccEEEcCCcccCCC----CC
Q 003046 340 -QPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGP-----IPDFSGCPDLRIIHLEDNQLTGP----LP 405 (854)
Q Consensus 340 -~~~L~~L~Ls~n~l~g~----lp~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~g~----~p 405 (854)
.++|+.|+|++|++++. ++..+..+++|+.|+|++|.+++. +..+..+++|+.|+|++|.+++. ++
T Consensus 135 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 214 (319)
T cd00116 135 LPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALA 214 (319)
T ss_pred CCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHH
Confidence 14788888888888742 344566677888888888888741 12245567888888888887633 33
Q ss_pred ccccCCCCCceeecccccccccccccc-------ccccccccccCC
Q 003046 406 SSLMNLPNLRELYVQNNMLSGTVPSSL-------LSKNVVLNYAGN 444 (854)
Q Consensus 406 ~~~~~l~~L~~L~l~~N~l~g~ip~~l-------~~~l~~l~~~~n 444 (854)
..+..+++|+.|++++|++++.....+ ...++.|++.+|
T Consensus 215 ~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n 260 (319)
T cd00116 215 ETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCN 260 (319)
T ss_pred HHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCC
Confidence 456677788888888888874222222 146677777776
No 479
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.58 E-value=1.7e-07 Score=120.11 Aligned_cols=154 Identities=14% Similarity=0.076 Sum_probs=92.9
Q ss_pred ceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeE
Q 003046 266 FVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITV 345 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~ 345 (854)
.|+.|.+.++.+..+|+.+ ..+.|..|++..+.+.. ....++.+..++..... -|.. ...++ +...+++|+.
T Consensus 590 ~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls---~~~~--l~~ip-~ls~l~~Le~ 661 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLR---GSKN--LKEIP-DLSMATNLET 661 (1153)
T ss_pred ccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccc-cccccccCCCCCEEECC---CCCC--cCcCC-ccccCCcccE
Confidence 4677777888888888776 46778888888777654 12223333333333211 1100 00000 1234578888
Q ss_pred EEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccc
Q 003046 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 346 L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
|+|++|.....+|..|.+|++|+.|+|++|..-+.+|...++++|+.|+|++|...+.+|.. ..+|+.|+|++|.|.
T Consensus 662 L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~ 738 (1153)
T PLN03210 662 LKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE 738 (1153)
T ss_pred EEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc
Confidence 88888766668888888888888888888644444444336777777777777554455542 245566666666665
Q ss_pred cccccc
Q 003046 426 GTVPSS 431 (854)
Q Consensus 426 g~ip~~ 431 (854)
.+|..
T Consensus 739 -~lP~~ 743 (1153)
T PLN03210 739 -EFPSN 743 (1153)
T ss_pred -ccccc
Confidence 55543
No 480
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.57 E-value=6.8e-09 Score=106.42 Aligned_cols=130 Identities=19% Similarity=0.193 Sum_probs=88.3
Q ss_pred ceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeE
Q 003046 266 FVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITV 345 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~ 345 (854)
.|+.|+|+.|.++.+-..+--+..++.|+++.|.+.+.. +...+++|+.
T Consensus 285 ~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~-------------------------------nLa~L~~L~~ 333 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQ-------------------------------NLAELPQLQL 333 (490)
T ss_pred hhhhccccccchhhhhhhhhhccceeEEeccccceeeeh-------------------------------hhhhcccceE
Confidence 456677777777777776666677777777777765410 0123457777
Q ss_pred EEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCC--ccccCCCCCceeeccccc
Q 003046 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLP--SSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 346 L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~ 423 (854)
||||+|.|+ .+..+-.+|-+.+.|.|+.|.|. .+..+..|-+|..||+++|+|. .+- ..+++|+.|+.|.|.+|+
T Consensus 334 LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE-~LSGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 334 LDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE-TLSGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred eecccchhH-hhhhhHhhhcCEeeeehhhhhHh-hhhhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCC
Confidence 888888777 66666667777777888877775 3344566667777888888776 232 357778888888888888
Q ss_pred ccccccc
Q 003046 424 LSGTVPS 430 (854)
Q Consensus 424 l~g~ip~ 430 (854)
|. .+|+
T Consensus 411 l~-~~vd 416 (490)
T KOG1259|consen 411 LA-GSVD 416 (490)
T ss_pred cc-ccch
Confidence 77 4443
No 481
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.55 E-value=5.3e-07 Score=93.00 Aligned_cols=134 Identities=21% Similarity=0.253 Sum_probs=96.3
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCc----------------------cchhchHHHHHHhhhcCCC--c
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY----------------------QGKREFTNEVTLLSRIHHR--N 583 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~----------------------~~~~~~~~E~~~l~~l~Hp--n 583 (854)
+.++.+||-|.=+.||.|...+|.++|||.-+.... ......++|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456789999999999999999999999997542110 0122356799999988644 5
Q ss_pred eeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc
Q 003046 584 LVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 584 Iv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~ 663 (854)
+.+.+++ ++..+||||+++-.|...- ++....-.|+..|+.-+..+-.. ||||+|+.+-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 5555543 4668999999986554321 12233344555555555555555 999999999999999
Q ss_pred CCCcEEEEEecccc
Q 003046 664 KHMRAKVSDFGLSK 677 (854)
Q Consensus 664 ~~~~~kL~DFGla~ 677 (854)
++|.+.++||-.+.
T Consensus 237 ~dg~~~vIDwPQ~v 250 (304)
T COG0478 237 EDGDIVVIDWPQAV 250 (304)
T ss_pred cCCCEEEEeCcccc
Confidence 99999999997654
No 482
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.52 E-value=5.4e-06 Score=89.56 Aligned_cols=263 Identities=13% Similarity=0.127 Sum_probs=154.7
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeee------eee-cCeEEEEEE
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGY------CQE-EGRSVLVYE 602 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~------~~~-~~~~~lV~e 602 (854)
.+.||+|+-+.+|---- -..-+.|+.+........+. ++.|... .||-+-.-+.+ -.+ +...-+.|.
T Consensus 16 gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 16 GRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CccccCCccceeeecch--hhchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 56799999999995421 12234577765443322222 2333333 45533321111 111 223567777
Q ss_pred ecCCC-CHHHhhcc--cccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 603 FMHNG-TLKEHLYG--TLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~g-sL~~~L~~--~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
.+.+. ...++... ........+|...++.+..+|.+.+-||.. |.+-+|+.++|+|+.+++.+.|.|-..-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceeec
Confidence 77654 23333221 112334478999999999999999999998 9999999999999999999999975432222
Q ss_pred cCCCcceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhC-CcccccccccccccchHHHHHHhhhcC
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISG-QEAISNEKFGANCRNIVQWAKLHIESG 753 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG-~~pf~~~~~~~~~~~l~~~~~~~~~~~ 753 (854)
.. .....-..|...|.+||.-. +..-+...|.|.+||++++++.| ++||.+-........-.+- .+..+
T Consensus 168 ~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~---~Ia~g 242 (637)
T COG4248 168 AN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET---DIAHG 242 (637)
T ss_pred cC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh---hhhcc
Confidence 22 22223345889999999865 33456778999999999999986 9999764422111111100 00001
Q ss_pred CcccccCCc--cc---CcCCHH-HHHHHHHHHHHccCC--CCCCCCCHHHHHHHHHHHHHH
Q 003046 754 DIQGIIDPS--LL---DEYDIQ-SMWKIEEKALMCVLP--HGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 754 ~~~~~id~~--l~---~~~~~~-~~~~l~~l~~~Cl~~--~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+...-|.. +. .+.+.+ -...+-.+-.+|+.. .+.-||+++..+..|.++...
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 111111100 00 011111 112344555677764 467899999999998876543
No 483
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.51 E-value=4.1e-08 Score=107.77 Aligned_cols=105 Identities=29% Similarity=0.334 Sum_probs=79.8
Q ss_pred CCeeEEEecCCCCcc----cCCcccccC-ccCcEEeccCCcccccCC-----CCCCCCCccEEEcCCcccCCC----CCc
Q 003046 341 PSITVIHLSSKNLTG----NIPSDLTKL-SSLVELWLDGNSLTGPIP-----DFSGCPDLRIIHLEDNQLTGP----LPS 406 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g----~lp~~~~~l-~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~g~----~p~ 406 (854)
++|+.|+|++|++++ .+...+..+ ++|+.|+|++|.+++... .+..+.+|+.|+|++|.+++. ++.
T Consensus 108 ~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~ 187 (319)
T cd00116 108 SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAE 187 (319)
T ss_pred CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHH
Confidence 469999999999983 344566777 899999999999985322 366788999999999999842 444
Q ss_pred cccCCCCCceeecccccccccccccc------ccccccccccCCc
Q 003046 407 SLMNLPNLRELYVQNNMLSGTVPSSL------LSKNVVLNYAGNI 445 (854)
Q Consensus 407 ~~~~l~~L~~L~l~~N~l~g~ip~~l------~~~l~~l~~~~n~ 445 (854)
.+..+++|+.|+|++|.+++.-...+ +++++.|++++|+
T Consensus 188 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~ 232 (319)
T cd00116 188 GLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNN 232 (319)
T ss_pred HHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCc
Confidence 56677899999999999874433222 4568888998875
No 484
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.40 E-value=5.4e-08 Score=99.96 Aligned_cols=104 Identities=23% Similarity=0.269 Sum_probs=82.0
Q ss_pred CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
-.|.++.|+||+|+|. .+-. +..|.+|+.||||+|.|+..--.-..|.+.+.|.|+.|.|. .+ ..++.|-+|..||
T Consensus 305 L~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~iE-~L-SGL~KLYSLvnLD 380 (490)
T KOG1259|consen 305 LAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNKIE-TL-SGLRKLYSLVNLD 380 (490)
T ss_pred hccceeEEecccccee-eehh-hhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhhHh-hh-hhhHhhhhheecc
Confidence 3578999999999998 5544 88899999999999999865544455788899999999988 33 4578888899999
Q ss_pred cccccccccccccc----ccccccccccCCccc
Q 003046 419 VQNNMLSGTVPSSL----LSKNVVLNYAGNINL 447 (854)
Q Consensus 419 l~~N~l~g~ip~~l----~~~l~~l~~~~n~~~ 447 (854)
+++|+|. .+..-- ++++..+.+.+||..
T Consensus 381 l~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 381 LSSNQIE-ELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred ccccchh-hHHHhcccccccHHHHHhhcCCCcc
Confidence 9999998 554322 667888888888753
No 485
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.39 E-value=2.5e-08 Score=113.09 Aligned_cols=126 Identities=29% Similarity=0.381 Sum_probs=99.8
Q ss_pred CCCCCCCCCCCe---eEeCCC----------CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCC-CCCC
Q 003046 321 GGDPCLPVPWSW---LQCNSD----------PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSG 386 (854)
Q Consensus 321 ~~dpc~~~~~~~---~~c~~~----------~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 386 (854)
+||-|....|.. ..|+.. -++.|+.|||++|+++ ... .+..|+.|++|||+.|+|+..+- ...+
T Consensus 154 ggd~~ns~~Wn~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~g 231 (1096)
T KOG1859|consen 154 GGDISNSPVWNKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVG 231 (1096)
T ss_pred ccccccchhhhhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhccccccchhh
Confidence 677777666654 345432 2578999999999999 444 78999999999999999996544 2455
Q ss_pred CCCccEEEcCCcccCCCCCccccCCCCCceeeccccccccc---cccccccccccccccCCcccccCC
Q 003046 387 CPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT---VPSSLLSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 387 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~---ip~~l~~~l~~l~~~~n~~~~~~~ 451 (854)
+. |+.|.|++|-++ .+ -.+.+|.+|+.|||++|-|.+. .|-+.+..|..|.+.|||..|...
T Consensus 232 c~-L~~L~lrnN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~ 296 (1096)
T KOG1859|consen 232 CK-LQLLNLRNNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPW 296 (1096)
T ss_pred hh-heeeeecccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHH
Confidence 66 999999999998 34 3588999999999999999854 345557888999999999999764
No 486
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.36 E-value=3.6e-06 Score=86.46 Aligned_cols=106 Identities=26% Similarity=0.317 Sum_probs=81.5
Q ss_pred hhchHHHHHHhhhcCCCc--eeeEeeeeeec----CeEEEEEEecCCC-CHHHhhcccccccccccHHHHHHHHHHHHHH
Q 003046 566 KREFTNEVTLLSRIHHRN--LVQFLGYCQEE----GRSVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKG 638 (854)
Q Consensus 566 ~~~~~~E~~~l~~l~Hpn--Iv~l~g~~~~~----~~~~lV~e~~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~g 638 (854)
.....+|...+.++.... +.+.+++.... ...++|+|++++. +|.+++.... ..+......++.+++..
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHHH
Confidence 445778888888875433 34556655442 2458999999884 7888885321 14455667899999999
Q ss_pred HHHHHhCCCCceeccCCCCCCeEEcCCC---cEEEEEeccccc
Q 003046 639 IEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKF 678 (854)
Q Consensus 639 L~yLH~~~~~~ivHrDIkp~NILl~~~~---~~kL~DFGla~~ 678 (854)
+.-||.. ||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 131 i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 131 IAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999 999999999999999887 899999998764
No 487
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.35 E-value=2.1e-06 Score=98.89 Aligned_cols=140 Identities=23% Similarity=0.268 Sum_probs=91.2
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccc----------------------------------------hhchHH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG----------------------------------------KREFTN 571 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~----------------------------------------~~~~~~ 571 (854)
+.|+.++-|-||+|++++|+.||||+.+..-... +-++..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6789999999999999999999999976531110 012344
Q ss_pred HHHHhhhcC-----CCceeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHH-HHHHHhC
Q 003046 572 EVTLLSRIH-----HRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKG-IEYLHTG 645 (854)
Q Consensus 572 E~~~l~~l~-----HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~~ 645 (854)
|..-+.+++ .+++.----|..-.+...|+|||++|-.+.+...- +...++. ..++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l---~~~g~d~---k~ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL---KSAGIDR---KELAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH---HhcCCCH---HHHHHHHHHHHHHHHHhc
Confidence 555555542 23332222222335667999999999888877421 1122332 2233333332 2223333
Q ss_pred CCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 646 CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 646 ~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|++|.|.+|.||+++.+|++.+.|||+.....
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 89999999999999999999999999986543
No 488
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.34 E-value=1.3e-07 Score=108.09 Aligned_cols=150 Identities=18% Similarity=0.313 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc--------eeecccccccccCcccccc
Q 003046 633 EDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH--------VSSIVRGTVGYLDPEYYIS 704 (854)
Q Consensus 633 ~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~--------~~~~~~gt~~Y~aPE~~~~ 704 (854)
.+++.||.|+|.. .++||++|.|++|.++..+..||+.|+.+......... ......-...|.|||++..
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455899999987 59999999999999999999999999987543331111 1111224568999999999
Q ss_pred CcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHcc
Q 003046 705 QQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCV 783 (854)
Q Consensus 705 ~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl 783 (854)
...+.++|+||+||++|-+.. |+.-+..... ........ ..+..-...++.....++.+-+.+.+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~~~-------------~~~~~~~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSFSR-------------NLLNAGAFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCC-cchhhhhh-------------cccccccccccccCcHHHHHHHHHHh
Confidence 889999999999999999994 4444433321 11101100 00101011122333456777778889
Q ss_pred CCCCCCCCCHHHHHH
Q 003046 784 LPHGHMRPSISEVLK 798 (854)
Q Consensus 784 ~~~P~~RPsm~eV~~ 798 (854)
..++..||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998777653
No 489
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.31 E-value=3.8e-07 Score=103.55 Aligned_cols=157 Identities=22% Similarity=0.248 Sum_probs=120.0
Q ss_pred ceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeE
Q 003046 266 FVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITV 345 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~ 345 (854)
.|+.|++..|.+..+|..+..+..|+.|+++.|++....... ..+..+..+... ++ ...-+++....+..|+.
T Consensus 141 nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~-~~~~~L~~L~ls-~N-----~i~~l~~~~~~~~~L~~ 213 (394)
T COG4886 141 NLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDLPKLL-SNLSNLNNLDLS-GN-----KISDLPPEIELLSALEE 213 (394)
T ss_pred hcccccccccchhhhhhhhhccccccccccCCchhhhhhhhh-hhhhhhhheecc-CC-----ccccCchhhhhhhhhhh
Confidence 688999999999999988999999999999999987743321 022122222110 00 11223332223445999
Q ss_pred EEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccc
Q 003046 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 346 L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
|.+++|.+. .++..+.++.+|..|.+.+|++...+..+..+++|+.|++++|+++ .++. ++.+.+|+.|++++|.+.
T Consensus 214 l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 214 LDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred hhhcCCcce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccccc-cccc-ccccCccCEEeccCcccc
Confidence 999999876 6888899999999999999999987777899999999999999999 6666 999999999999999999
Q ss_pred ccccccc
Q 003046 426 GTVPSSL 432 (854)
Q Consensus 426 g~ip~~l 432 (854)
..+|...
T Consensus 291 ~~~~~~~ 297 (394)
T COG4886 291 NALPLIA 297 (394)
T ss_pred ccchhhh
Confidence 5555544
No 490
>PRK09902 hypothetical protein; Provisional
Probab=98.28 E-value=1.7e-05 Score=80.22 Aligned_cols=137 Identities=18% Similarity=0.185 Sum_probs=101.2
Q ss_pred ccccCcEEEEEEEECCCcEEEEEEEecC---C---ccchhchHHHHHHhhhcCCCc--eeeEeeeee-e----cCeEEEE
Q 003046 534 IGSGGFGVVYYGKLKDGKEIAVKVLTSN---S---YQGKREFTNEVTLLSRIHHRN--LVQFLGYCQ-E----EGRSVLV 600 (854)
Q Consensus 534 iG~G~fg~Vy~~~~~~~~~vAvK~l~~~---~---~~~~~~~~~E~~~l~~l~Hpn--Iv~l~g~~~-~----~~~~~lV 600 (854)
-|+||-+.|++-.+. |+.+-+|.-... + +.....|.+|...|.++...+ +.+.+ ++. . .-..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 477899999988776 557888876421 1 335678999999999995322 44444 332 1 1246899
Q ss_pred EEecCC-CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc--EEEEEecccc
Q 003046 601 YEFMHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSK 677 (854)
Q Consensus 601 ~e~~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--~kL~DFGla~ 677 (854)
+|-+.+ -+|.+++... .-.+.+...+..+..++++.+.-||+. |+.|+|+.+.|||++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997764 4888887432 122456667778999999999999999 9999999999999986666 9999998765
No 491
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=1.6e-07 Score=101.54 Aligned_cols=174 Identities=18% Similarity=0.174 Sum_probs=117.7
Q ss_pred cccceeeeecccCCCCCCCcc---cchhhhceeccCCCCCccH-------HHHHHHHhhcCCCCccCCCCCCCCCCCCCe
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL---LNAMEINKYLERNDGSIDG-------VAIVSVISLYSSADWAQEGGDPCLPVPWSW 332 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~---i~~le~l~~L~l~~~~~~~-------~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~ 332 (854)
.++.++.|+|++|-++..-|. +..|..|+.|+++.|.+.. ..+..+|++ ...-|+- +|..
T Consensus 144 ~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L---------~l~~CGl-s~k~ 213 (505)
T KOG3207|consen 144 ILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQL---------VLNSCGL-SWKD 213 (505)
T ss_pred hCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheE---------EeccCCC-CHHH
Confidence 356778999999988877666 6677778889999887532 222223332 3445541 2333
Q ss_pred eEeCCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccC--CCCCCCCCccEEEcCCcccCCC-CCcc--
Q 003046 333 LQCNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGP-LPSS-- 407 (854)
Q Consensus 333 ~~c~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~Ls~N~l~g~-~p~~-- 407 (854)
|.--....|+|+.|+|..|...+.-.....-+..|++|||++|++-... +..+.|+.|+.|+++.+.|... +|+.
T Consensus 214 V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s 293 (505)
T KOG3207|consen 214 VQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVES 293 (505)
T ss_pred HHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccc
Confidence 3311234578999999999644344445566789999999999988766 4578899999999999998742 3333
Q ss_pred ---ccCCCCCceeeccccccccccccc----cccccccccccCCccc
Q 003046 408 ---LMNLPNLRELYVQNNMLSGTVPSS----LLSKNVVLNYAGNINL 447 (854)
Q Consensus 408 ---~~~l~~L~~L~l~~N~l~g~ip~~----l~~~l~~l~~~~n~~~ 447 (854)
...+++|++|+++.|+|. ..+.- .+.++..|.+.+|+.-
T Consensus 294 ~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 294 LDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhhhcccccceeeecccCccc-cccccchhhccchhhhhhccccccc
Confidence 356788999999999996 44432 1556666666666543
No 492
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.17 E-value=1.9e-05 Score=82.19 Aligned_cols=139 Identities=15% Similarity=0.228 Sum_probs=84.6
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCce--eeEeeeeeecCeEEEEEEecCCCC-
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL--VQFLGYCQEEGRSVLVYEFMHNGT- 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnI--v~l~g~~~~~~~~~lV~e~~~~gs- 608 (854)
..||+|..+.||+. .+..+++|..+... ......+|.++++.+..-.+ .+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 47899999999984 25567788876432 33456889999998864433 567777777777889999999863
Q ss_pred HHHhh---------------------cccccccccccHHHHHHHHH----------HHHH-HHHHHHhC-CCCceeccCC
Q 003046 609 LKEHL---------------------YGTLTHEQRINWIKRLEIAE----------DAAK-GIEYLHTG-CVPAIIHRDL 655 (854)
Q Consensus 609 L~~~L---------------------~~~~~~~~~l~~~~~~~i~~----------~ia~-gL~yLH~~-~~~~ivHrDI 655 (854)
+...+ |........+... ...+.. .+.. ...+|... ..+.++|+|+
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSY-KEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHH-HHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 21111 1100001011000 000000 0111 12222211 1236789999
Q ss_pred CCCCeEEcCCCcEEEEEecccc
Q 003046 656 KSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 656 kp~NILl~~~~~~kL~DFGla~ 677 (854)
.|.||++++++ +.|+||+.+.
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcC
Confidence 99999999888 9999999764
No 493
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.15 E-value=1.3e-07 Score=86.90 Aligned_cols=89 Identities=25% Similarity=0.388 Sum_probs=55.3
Q ss_pred CeeEEEecCCCCcccCCcccccC---ccCcEEeccCCcccccCCCCCC-CCCccEEEcCCcccCCCCCccccCCCCCcee
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKL---SSLVELWLDGNSLTGPIPDFSG-CPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 417 (854)
.+..|+|++++|- .+++....+ ..|+..+|++|.|...++.|.. .+.++.|+|++|+|+ .+|.++..++.|+.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 4555666666665 555544443 3444456777777666666544 446666777777776 666667777777777
Q ss_pred eccccccccccccccc
Q 003046 418 YVQNNMLSGTVPSSLL 433 (854)
Q Consensus 418 ~l~~N~l~g~ip~~l~ 433 (854)
+++.|.|. ..|.-++
T Consensus 106 Nl~~N~l~-~~p~vi~ 120 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIA 120 (177)
T ss_pred ccccCccc-cchHHHH
Confidence 77777776 5665553
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.06 E-value=4.9e-07 Score=83.17 Aligned_cols=89 Identities=24% Similarity=0.311 Sum_probs=81.4
Q ss_pred CCeeEEEecCCCCcccCCcccccC-ccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKL-SSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
..|+.++|++|.+. ..|+.|... +.++.|+|++|+|+..|.++..++.|+.|+++.|.|. ..|..+..|.+|-.|+.
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 47889999999999 777777654 6999999999999999999999999999999999999 89999999999999999
Q ss_pred ccccccccccccc
Q 003046 420 QNNMLSGTVPSSL 432 (854)
Q Consensus 420 ~~N~l~g~ip~~l 432 (854)
.+|.+. .||-.+
T Consensus 131 ~~na~~-eid~dl 142 (177)
T KOG4579|consen 131 PENARA-EIDVDL 142 (177)
T ss_pred CCCccc-cCcHHH
Confidence 999999 888776
No 495
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.06 E-value=3.5e-05 Score=79.08 Aligned_cols=136 Identities=22% Similarity=0.259 Sum_probs=90.8
Q ss_pred cccccCcEEEEEEEECCCcEEEEEEEecCCccch---------h---------------chHHHHHHhhhcC--CCceee
Q 003046 533 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGK---------R---------------EFTNEVTLLSRIH--HRNLVQ 586 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~---------~---------------~~~~E~~~l~~l~--HpnIv~ 586 (854)
.|+.|.-+.||+|.-.++..+|||+.+......+ . -..+|+.-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 5778888899999988899999999875422111 0 1345677777663 233333
Q ss_pred EeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC
Q 003046 587 FLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 666 (854)
Q Consensus 587 l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~ 666 (854)
-+++. .-.|||||+..... -...+ ..-.+.......+..++.+.+.-|-..+ ++||+||..-|||+. ++
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~---pAP~L-kDv~~e~~e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~-~~ 203 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGL---PAPRL-KDVPLELEEAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH-DG 203 (268)
T ss_pred ceeec----CCeEEEEeccCCCC---CCCCc-ccCCcCchhHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-CC
Confidence 34433 34799999965411 11111 1112222245667788888888887742 899999999999999 88
Q ss_pred cEEEEEecccccc
Q 003046 667 RAKVSDFGLSKFA 679 (854)
Q Consensus 667 ~~kL~DFGla~~~ 679 (854)
.+.|+|||.|...
T Consensus 204 ~p~iID~~QaV~~ 216 (268)
T COG1718 204 EPYIIDVSQAVTI 216 (268)
T ss_pred eEEEEECcccccc
Confidence 9999999988644
No 496
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.05 E-value=2.2e-05 Score=90.17 Aligned_cols=141 Identities=21% Similarity=0.247 Sum_probs=88.3
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccc-------------------------------------hhchHHHHH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG-------------------------------------KREFTNEVT 574 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~-------------------------------------~~~~~~E~~ 574 (854)
+.||.-+.|.||+|++++|+.||||+-+..-... +-+|..|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 6799999999999999999999999976431110 113445554
Q ss_pred Hhhhc----CCCce---eeEeeee-eecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC
Q 003046 575 LLSRI----HHRNL---VQFLGYC-QEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC 646 (854)
Q Consensus 575 ~l~~l----~HpnI---v~l~g~~-~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~ 646 (854)
-..++ .|-+. |.+=.++ .-.....|+||||+|..+.|.-.- ....++... ++..+.++ |++.--
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i---~~~gi~~~~---i~~~l~~~--~~~qIf 318 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI---DKRGISPHD---ILNKLVEA--YLEQIF 318 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH---HHcCCCHHH---HHHHHHHH--HHHHHH
Confidence 44433 34441 1111222 223467999999999877665321 122344333 33333332 122111
Q ss_pred CCceeccCCCCCCeEEcC----CCcEEEEEeccccccc
Q 003046 647 VPAIIHRDLKSSNILLDK----HMRAKVSDFGLSKFAV 680 (854)
Q Consensus 647 ~~~ivHrDIkp~NILl~~----~~~~kL~DFGla~~~~ 680 (854)
..|++|+|=+|.||++.. ++++.+-|||+.....
T Consensus 319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred hcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 238999999999999994 6789999999986554
No 497
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.03 E-value=1.2e-06 Score=99.22 Aligned_cols=182 Identities=16% Similarity=0.168 Sum_probs=133.8
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCc-eeeEeeeeeecCeEEEEEEecCCC-C
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVYEFMHNG-T 608 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~~~~~lV~e~~~~g-s 608 (854)
-+.+++|+++.++|.+-...+....+.+.. .....-++++|.+++||| .+..++-+..+...+++++++.++ +
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 355789999999998765444444555432 244566899999999999 777777777788889999999887 2
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceee
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSS 688 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 688 (854)
-.... ...+..+...+...+...-++++++||+. .=+|+| ||+..+ +..|..||+.+..+.... ...
T Consensus 322 ~~~~~---~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~ 388 (829)
T KOG0576|consen 322 SALEM---TVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPR 388 (829)
T ss_pred ccccC---ChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc--ccc
Confidence 22111 12233455555666777888999999986 347888 777665 678999999876554332 334
Q ss_pred cccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccc
Q 003046 689 IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 689 ~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf 730 (854)
...+|+.++|||+.....+..+.|+|+.|+-..++--|-+|-
T Consensus 389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 456899999999999999999999999998777777776654
No 498
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.03 E-value=4.1e-06 Score=62.78 Aligned_cols=36 Identities=33% Similarity=0.557 Sum_probs=16.5
Q ss_pred cCcEEeccCCcccccCCCCCCCCCccEEEcCCcccC
Q 003046 366 SLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLT 401 (854)
Q Consensus 366 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 401 (854)
+|++|+|++|+|+.+++.+.+|++|+.|+|++|+|+
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCC
Confidence 445555555555544333444555555555555444
No 499
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.01 E-value=4.3e-06 Score=62.66 Aligned_cols=39 Identities=26% Similarity=0.503 Sum_probs=34.2
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCccccc
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGP 380 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~ 380 (854)
++|+.|+|++|+|+ .+|+.|++|++|+.|+|++|+|+..
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCCC
Confidence 47999999999999 7898999999999999999999854
No 500
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.98 E-value=8.7e-05 Score=78.29 Aligned_cols=140 Identities=18% Similarity=0.159 Sum_probs=85.2
Q ss_pred ccccCc-EEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCCCCHHH
Q 003046 534 IGSGGF-GVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTLKE 611 (854)
Q Consensus 534 iG~G~f-g~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~ 611 (854)
|-.|.. ..||+.... +..+.||+..... ...+..|+++++.+. +--+.+++++....+..++|||+++|.++.+
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 444555 788998765 4788888875432 346778999988884 3445577777776667899999999887764
Q ss_pred hh-------------------ccccccccccc-H-HHHHHHHH--------------------HHHHHHHHHHh----CC
Q 003046 612 HL-------------------YGTLTHEQRIN-W-IKRLEIAE--------------------DAAKGIEYLHT----GC 646 (854)
Q Consensus 612 ~L-------------------~~~~~~~~~l~-~-~~~~~i~~--------------------~ia~gL~yLH~----~~ 646 (854)
.. +........+. + .....-.. .+...+..|-. ..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 32 11000000000 0 00000000 01111222211 11
Q ss_pred CCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 647 VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 647 ~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
.+.++|+|+.|.|||++++..+.|+||+.+.
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 2468999999999999998778899999764
Done!