Query 003046
Match_columns 854
No_of_seqs 954 out of 4837
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:20:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003046.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003046hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 7.3E-51 2.5E-55 445.7 19.8 257 529-805 44-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 3E-51 1E-55 442.7 15.5 256 529-804 16-288 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 5.7E-52 1.9E-56 450.3 9.8 256 528-803 28-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 6.3E-50 2.2E-54 432.7 19.2 254 529-803 39-298 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 6.2E-49 2.1E-53 429.1 19.7 250 529-805 61-316 (336)
6 4fih_A Serine/threonine-protei 100.0 4.9E-49 1.7E-53 431.1 17.3 247 529-799 77-324 (346)
7 3hmm_A TGF-beta receptor type- 100.0 3.5E-48 1.2E-52 420.9 21.4 266 529-805 6-297 (303)
8 3fpq_A Serine/threonine-protei 100.0 7.2E-48 2.5E-52 413.6 21.7 247 529-799 29-283 (290)
9 4ase_A Vascular endothelial gr 100.0 4.8E-49 1.6E-53 434.9 12.4 265 523-806 61-348 (353)
10 4b9d_A Serine/threonine-protei 100.0 7.1E-49 2.4E-53 430.5 12.3 249 528-799 26-277 (350)
11 4fie_A Serine/threonine-protei 100.0 6.9E-48 2.4E-52 432.3 18.8 248 528-799 153-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-48 4.7E-53 421.4 11.7 247 528-799 34-285 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.4E-47 4.7E-52 407.9 15.3 245 527-799 14-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 9.7E-48 3.3E-52 414.6 11.1 246 528-799 26-282 (304)
15 4g31_A Eukaryotic translation 100.0 2E-45 6.9E-50 397.7 18.5 249 528-799 7-280 (299)
16 2qkw_B Protein kinase; three-h 100.0 2.7E-43 9.3E-48 386.0 24.2 274 529-806 42-316 (321)
17 3uim_A Brassinosteroid insensi 100.0 1.1E-43 3.8E-48 389.7 18.9 288 516-803 18-309 (326)
18 4b99_A Mitogen-activated prote 100.0 3.1E-43 1.1E-47 394.9 20.2 263 528-799 56-345 (398)
19 3uto_A Twitchin; kinase, muscl 100.0 1.2E-42 4.2E-47 408.8 17.4 250 528-799 159-411 (573)
20 4f9c_A Cell division cycle 7-r 100.0 2.8E-42 9.4E-47 383.1 19.0 194 528-733 23-250 (361)
21 3v5w_A G-protein coupled recep 100.0 5.5E-42 1.9E-46 401.0 16.9 246 529-799 192-450 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 7.1E-41 2.4E-45 364.8 18.7 256 528-806 12-283 (310)
23 3p86_A Serine/threonine-protei 100.0 2.2E-40 7.4E-45 361.3 18.7 258 527-806 38-299 (309)
24 3fxz_A Serine/threonine-protei 100.0 2.1E-40 7.1E-45 359.3 18.4 248 528-799 22-270 (297)
25 2nru_A Interleukin-1 receptor- 100.0 2E-39 6.8E-44 352.6 25.2 281 515-804 12-305 (307)
26 3kul_A Ephrin type-A receptor 100.0 3E-41 1E-45 370.7 10.9 259 525-806 48-314 (325)
27 3zgw_A Maternal embryonic leuc 100.0 1.4E-40 4.8E-45 368.3 15.5 247 528-799 12-261 (347)
28 2psq_A Fibroblast growth facto 100.0 1.6E-40 5.3E-45 371.8 16.0 260 528-807 83-366 (370)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.4E-40 4.9E-45 354.2 14.5 255 528-806 10-265 (268)
30 4hcu_A Tyrosine-protein kinase 100.0 1.2E-40 4E-45 355.3 13.7 254 528-805 12-266 (269)
31 2c30_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 354.5 24.2 260 516-799 23-295 (321)
32 2qol_A Ephrin receptor; recept 100.0 7.7E-41 2.6E-45 374.6 11.2 257 527-806 46-310 (373)
33 3gen_A Tyrosine-protein kinase 100.0 2.5E-40 8.4E-45 355.4 13.9 256 527-806 25-281 (283)
34 3soc_A Activin receptor type-2 100.0 3.3E-40 1.1E-44 361.9 15.0 266 528-805 26-318 (322)
35 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-40 8.1E-45 371.3 13.7 255 528-805 116-374 (377)
36 3fe3_A MAP/microtubule affinit 100.0 4.4E-40 1.5E-44 361.8 15.0 245 528-799 17-265 (328)
37 4euu_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 349.4 25.1 271 528-804 11-308 (319)
38 3ugc_A Tyrosine-protein kinase 100.0 1.5E-40 5.2E-45 359.4 9.9 264 527-805 11-291 (295)
39 4eqm_A Protein kinase; transfe 100.0 7.6E-40 2.6E-44 354.3 15.1 258 528-805 13-275 (294)
40 2yab_A Death-associated protei 100.0 1.7E-39 5.7E-44 361.8 17.4 249 528-799 14-273 (361)
41 1o6l_A RAC-beta serine/threoni 100.0 2.2E-39 7.4E-44 357.5 17.8 245 529-799 8-261 (337)
42 2y0a_A Death-associated protei 100.0 2.9E-39 9.9E-44 355.1 18.6 251 526-799 11-272 (326)
43 3q4u_A Activin receptor type-1 100.0 4.9E-39 1.7E-43 348.1 19.8 257 528-803 10-300 (301)
44 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-39 3.7E-44 355.5 14.6 260 527-806 24-312 (314)
45 3vhe_A Vascular endothelial gr 100.0 4.1E-40 1.4E-44 366.1 11.1 262 526-806 22-356 (359)
46 1qcf_A Haematopoetic cell kina 100.0 6.9E-40 2.4E-44 376.7 12.8 253 528-804 190-443 (454)
47 3tt0_A Basic fibroblast growth 100.0 1.4E-39 4.8E-44 365.7 14.9 261 526-806 69-353 (382)
48 3niz_A Rhodanese family protei 100.0 2.8E-39 9.5E-44 352.8 16.8 263 528-799 23-301 (311)
49 3c0i_A Peripheral plasma membr 100.0 2.1E-39 7.3E-44 359.9 16.2 256 525-799 23-287 (351)
50 1mp8_A Focal adhesion kinase 1 100.0 1.5E-39 5E-44 349.3 13.8 257 527-807 16-278 (281)
51 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-39 4.8E-44 377.9 14.0 254 528-804 222-477 (495)
52 3poz_A Epidermal growth factor 100.0 1.9E-39 6.5E-44 356.6 14.2 255 528-806 17-279 (327)
53 3l9p_A Anaplastic lymphoma kin 100.0 7.9E-40 2.7E-44 365.6 11.2 261 527-807 72-347 (367)
54 2izr_A Casein kinase I isoform 100.0 7.1E-39 2.4E-43 352.4 18.6 259 528-806 11-282 (330)
55 3kex_A Receptor tyrosine-prote 100.0 3.1E-39 1E-43 354.6 15.5 255 528-806 15-277 (325)
56 3tki_A Serine/threonine-protei 100.0 2.4E-39 8.1E-44 355.4 14.3 250 528-799 9-262 (323)
57 3lxl_A Tyrosine-protein kinase 100.0 1E-39 3.6E-44 358.5 11.4 266 527-807 24-305 (327)
58 1ob3_A PFPK5, cell division co 100.0 4.1E-39 1.4E-43 347.2 15.8 262 529-799 5-281 (288)
59 1tki_A Titin; serine kinase, m 100.0 3.7E-39 1.3E-43 353.5 15.7 249 528-799 7-258 (321)
60 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.6E-39 5.5E-44 360.9 12.8 246 528-799 25-281 (353)
61 1rjb_A FL cytokine receptor; k 100.0 5E-39 1.7E-43 355.4 16.8 264 526-808 45-337 (344)
62 3dtc_A Mitogen-activated prote 100.0 2.1E-39 7.1E-44 345.7 13.1 251 528-803 9-271 (271)
63 3kfa_A Tyrosine-protein kinase 100.0 1.7E-39 5.8E-44 349.6 12.3 258 527-807 14-273 (288)
64 1k9a_A Carboxyl-terminal SRC k 100.0 9.8E-39 3.3E-43 366.6 19.2 248 529-805 196-445 (450)
65 2zv2_A Calcium/calmodulin-depe 100.0 1.6E-38 5.4E-43 344.2 19.7 247 528-799 15-293 (298)
66 3t9t_A Tyrosine-protein kinase 100.0 2.1E-39 7E-44 344.8 12.4 254 528-805 10-264 (267)
67 4aw2_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 366.6 16.0 252 529-799 77-339 (437)
68 1qpc_A LCK kinase; alpha beta 100.0 4.2E-39 1.4E-43 345.1 14.8 256 527-806 14-270 (279)
69 3soa_A Calcium/calmodulin-depe 100.0 9.5E-39 3.2E-43 365.1 18.6 252 526-799 11-268 (444)
70 4dc2_A Protein kinase C IOTA t 100.0 1.6E-38 5.4E-43 357.5 20.0 254 528-799 54-319 (396)
71 3v8s_A RHO-associated protein 100.0 2.6E-39 8.9E-44 365.7 13.6 248 530-799 73-330 (410)
72 1kob_A Twitchin; kinase, intra 100.0 1E-38 3.5E-43 358.6 18.4 250 528-799 53-305 (387)
73 1t46_A HOMO sapiens V-KIT hard 100.0 3E-39 1E-43 351.8 13.6 260 527-805 24-307 (313)
74 1csn_A Casein kinase-1; phosph 100.0 2E-38 6.9E-43 342.7 19.9 259 528-805 12-283 (298)
75 1luf_A Muscle-specific tyrosin 100.0 1.5E-39 5E-44 359.2 11.0 260 527-806 48-336 (343)
76 2x4f_A Myosin light chain kina 100.0 9.5E-39 3.2E-43 357.6 17.7 247 531-799 94-343 (373)
77 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-39 7.8E-44 372.1 12.9 253 528-804 186-439 (452)
78 2bdw_A Hypothetical protein K1 100.0 9E-39 3.1E-43 356.4 17.2 251 526-799 29-285 (362)
79 3lxp_A Non-receptor tyrosine-p 100.0 4.1E-39 1.4E-43 352.5 14.1 262 529-807 34-312 (318)
80 3qd2_B Eukaryotic translation 100.0 7.9E-39 2.7E-43 351.1 16.2 250 527-799 7-326 (332)
81 3qup_A Tyrosine-protein kinase 100.0 3.7E-39 1.2E-43 353.3 13.3 260 527-806 24-299 (323)
82 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-38 4.5E-43 348.4 17.7 267 527-799 6-294 (317)
83 3p1a_A MYT1 kinase, membrane-a 100.0 9.4E-39 3.2E-43 348.6 16.3 250 521-799 52-305 (311)
84 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-38 3.6E-43 350.5 16.7 250 532-799 17-271 (325)
85 3o0g_A Cell division protein k 100.0 1.4E-38 4.6E-43 343.7 17.1 260 529-799 5-283 (292)
86 2i1m_A Macrophage colony-stimu 100.0 5.8E-39 2E-43 353.2 14.3 263 527-808 47-329 (333)
87 1fot_A TPK1 delta, CAMP-depend 100.0 9E-39 3.1E-43 349.8 15.6 243 528-799 8-259 (318)
88 3cc6_A Protein tyrosine kinase 100.0 7.7E-39 2.6E-43 343.5 14.8 259 528-810 14-278 (281)
89 3hko_A Calcium/calmodulin-depe 100.0 1.6E-38 5.4E-43 351.4 17.6 257 526-799 26-331 (345)
90 3h4j_B AMPK kdaid, SNF1-like p 100.0 9E-39 3.1E-43 352.3 15.5 244 528-799 11-259 (336)
91 4fvq_A Tyrosine-protein kinase 100.0 5.1E-39 1.7E-43 346.1 13.2 251 527-807 9-277 (289)
92 4e5w_A Tyrosine-protein kinase 100.0 1.7E-39 6E-44 352.0 9.7 263 527-804 22-301 (302)
93 3op5_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 355.1 17.0 266 527-806 36-330 (364)
94 1u59_A Tyrosine-protein kinase 100.0 1.9E-38 6.6E-43 341.6 17.5 253 532-808 16-275 (287)
95 1xjd_A Protein kinase C, theta 100.0 4E-39 1.4E-43 356.4 12.0 246 528-799 19-270 (345)
96 3lb7_A RAF proto-oncogene seri 100.0 1.6E-38 5.4E-43 346.2 16.4 261 524-805 34-300 (307)
97 2wqm_A Serine/threonine-protei 100.0 4.2E-38 1.5E-42 342.7 19.7 262 528-807 34-299 (310)
98 4f0f_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 340.0 17.9 249 528-802 21-286 (287)
99 3a62_A Ribosomal protein S6 ki 100.0 1.6E-38 5.4E-43 349.3 16.0 246 528-799 19-277 (327)
100 4eut_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 354.6 20.4 273 528-806 11-310 (396)
101 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.6E-38 5.4E-43 352.6 15.7 242 529-799 44-294 (350)
102 3kmu_A ILK, integrin-linked ki 100.0 2.6E-38 8.8E-43 336.6 16.7 249 528-804 12-269 (271)
103 2pvf_A Fibroblast growth facto 100.0 1.9E-38 6.4E-43 349.6 16.1 262 526-807 35-320 (334)
104 3dbq_A Dual specificity protei 100.0 7.5E-39 2.6E-43 354.3 12.9 249 528-800 11-275 (343)
105 2eva_A TAK1 kinase - TAB1 chim 100.0 2.3E-38 7.9E-43 344.8 16.5 252 529-805 11-263 (307)
106 2vd5_A DMPK protein; serine/th 100.0 1.1E-38 3.8E-43 360.8 14.3 251 529-799 64-328 (412)
107 3a8x_A Protein kinase C IOTA t 100.0 3.6E-38 1.2E-42 349.1 18.2 254 528-799 11-276 (345)
108 3f3z_A Calcium/calmodulin-depe 100.0 3.3E-38 1.1E-42 337.7 17.2 250 526-799 9-262 (277)
109 3uc3_A Serine/threonine-protei 100.0 2.9E-38 1E-42 352.1 17.5 250 528-799 22-275 (361)
110 2i0e_A Protein kinase C-beta I 100.0 1.6E-38 5.5E-43 352.7 15.1 246 528-799 22-277 (353)
111 2a2a_A Death-associated protei 100.0 3.6E-38 1.2E-42 345.4 17.7 251 526-799 12-273 (321)
112 3mdy_A Bone morphogenetic prot 100.0 1.4E-37 4.9E-42 342.2 22.4 268 522-805 33-331 (337)
113 3g33_A Cell division protein k 100.0 1.7E-38 5.7E-43 345.7 14.7 269 522-799 5-297 (308)
114 2xir_A Vascular endothelial gr 100.0 1.1E-38 3.6E-43 348.0 12.8 261 527-806 28-311 (316)
115 2buj_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 347.5 13.7 260 527-804 30-305 (317)
116 3is5_A Calcium-dependent prote 100.0 9.6E-38 3.3E-42 336.0 20.1 252 527-799 23-279 (285)
117 1b6c_B TGF-B superfamily recep 100.0 1.5E-37 5.2E-42 342.9 22.0 269 518-805 34-336 (342)
118 4ejn_A RAC-alpha serine/threon 100.0 1.2E-38 4.1E-43 365.5 13.7 246 528-799 150-405 (446)
119 4fr4_A YANK1, serine/threonine 100.0 4.1E-38 1.4E-42 352.9 17.4 248 528-799 17-272 (384)
120 1xbb_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 339.3 17.2 258 529-811 19-285 (291)
121 4hgt_A Casein kinase I isoform 100.0 9.9E-38 3.4E-42 336.8 19.7 261 527-806 10-281 (296)
122 2w4o_A Calcium/calmodulin-depe 100.0 2.6E-38 8.8E-43 350.9 15.4 248 528-799 55-306 (349)
123 3lzb_A Epidermal growth factor 100.0 1.5E-38 5.1E-43 349.6 13.3 255 528-806 17-279 (327)
124 1mqb_A Ephrin type-A receptor 100.0 2.6E-38 8.7E-43 348.6 15.1 255 529-806 47-310 (333)
125 2h34_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 339.1 20.1 257 528-807 36-298 (309)
126 2h8h_A Proto-oncogene tyrosine 100.0 7.5E-39 2.6E-43 375.3 10.9 253 528-804 269-522 (535)
127 3ll6_A Cyclin G-associated kin 100.0 1.1E-38 3.9E-43 350.6 11.6 254 527-805 29-308 (337)
128 3gni_B Strad alpha; kinase fol 100.0 5.7E-38 2E-42 353.3 17.5 271 528-803 27-340 (389)
129 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-38 8.2E-43 352.0 14.2 253 528-801 56-324 (355)
130 2zmd_A Dual specificity protei 100.0 1.9E-38 6.6E-43 357.3 13.3 248 528-799 58-321 (390)
131 2a19_B Interferon-induced, dou 100.0 1.3E-37 4.5E-42 333.7 19.1 250 523-805 8-274 (284)
132 4agu_A Cyclin-dependent kinase 100.0 4.8E-38 1.6E-42 342.3 15.8 263 529-799 6-285 (311)
133 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-38 7.5E-43 341.7 13.0 261 523-804 21-287 (289)
134 2ozo_A Tyrosine-protein kinase 100.0 5.1E-38 1.8E-42 373.6 17.3 250 533-806 343-599 (613)
135 3uzp_A CKI-delta, CKID, casein 100.0 2E-37 7E-42 334.5 20.4 260 528-806 11-281 (296)
136 3ork_A Serine/threonine protei 100.0 1.1E-38 3.8E-43 347.8 10.2 255 528-803 14-279 (311)
137 3dls_A PAS domain-containing s 100.0 7.9E-38 2.7E-42 345.0 17.1 241 526-799 24-275 (335)
138 4fl3_A Tyrosine-protein kinase 100.0 3.7E-38 1.3E-42 375.8 15.5 249 532-805 375-631 (635)
139 3kk8_A Calcium/calmodulin depe 100.0 9.5E-38 3.3E-42 335.2 17.2 249 528-799 8-262 (284)
140 2eue_A Carbon catabolite derep 100.0 3.5E-38 1.2E-42 337.3 13.6 244 528-799 15-263 (275)
141 1fvr_A Tyrosine-protein kinase 100.0 4E-38 1.4E-42 345.9 14.4 256 528-805 27-300 (327)
142 3fdn_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 336.9 14.5 244 528-799 11-258 (279)
143 2qr7_A Ribosomal protein S6 ki 100.0 8.2E-38 2.8E-42 345.8 16.7 251 526-799 22-278 (342)
144 3c1x_A Hepatocyte growth facto 100.0 3.8E-38 1.3E-42 352.6 14.2 254 529-805 92-355 (373)
145 3lm5_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 344.1 16.0 261 518-799 20-288 (327)
146 3g2f_A Bone morphogenetic prot 100.0 6.9E-38 2.4E-42 344.9 15.9 269 528-807 15-320 (336)
147 3f66_A Hepatocyte growth facto 100.0 5.9E-38 2E-42 339.4 15.1 255 528-805 27-291 (298)
148 2r5t_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 352.4 13.8 242 528-795 40-286 (373)
149 2jam_A Calcium/calmodulin-depe 100.0 9.3E-38 3.2E-42 339.2 16.6 250 526-799 9-262 (304)
150 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.7E-37 9.3E-42 344.7 20.8 251 528-806 67-340 (365)
151 3bhy_A Death-associated protei 100.0 8.8E-38 3E-42 335.3 16.2 251 526-799 5-266 (283)
152 2ac3_A MAP kinase-interacting 100.0 1.2E-37 4.2E-42 339.9 17.6 256 531-799 18-296 (316)
153 3gxj_A TGF-beta receptor type- 100.0 2.4E-39 8.2E-44 350.7 3.9 258 528-805 5-297 (303)
154 2y94_A 5'-AMP-activated protei 100.0 5.3E-38 1.8E-42 361.4 15.3 245 528-799 18-267 (476)
155 1nxk_A MAP kinase-activated pr 100.0 3.4E-37 1.2E-41 348.2 21.5 246 532-799 68-322 (400)
156 3cok_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 334.4 15.8 247 528-799 13-263 (278)
157 3pls_A Macrophage-stimulating 100.0 8.9E-38 3E-42 337.7 15.8 254 531-806 26-288 (298)
158 1u5q_A Serine/threonine protei 100.0 5E-38 1.7E-42 348.4 13.8 244 528-799 56-306 (348)
159 2acx_A G protein-coupled recep 100.0 1.1E-37 3.7E-42 364.1 17.2 250 529-799 187-445 (576)
160 2v62_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 346.3 15.2 263 526-803 37-326 (345)
161 2yex_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42 332.8 15.8 251 527-799 8-262 (276)
162 3c4z_A Rhodopsin kinase; Ser/T 100.0 2E-37 6.7E-42 360.9 19.0 251 531-799 190-449 (543)
163 2w1i_A JAK2; chromosomal rearr 100.0 2.1E-38 7.1E-43 348.1 10.2 263 528-805 43-322 (326)
164 1x8b_A WEE1HU, WEE1-like prote 100.0 8.7E-38 3E-42 335.3 14.8 246 526-799 11-280 (289)
165 3brb_A Proto-oncogene tyrosine 100.0 5.5E-38 1.9E-42 342.3 13.3 260 527-806 35-309 (313)
166 2w5a_A Serine/threonine-protei 100.0 2.9E-38 1E-42 338.3 10.9 254 528-802 8-271 (279)
167 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.1E-38 1.7E-42 345.5 13.0 263 527-799 35-319 (329)
168 1p4o_A Insulin-like growth fac 100.0 2.6E-38 8.9E-43 346.2 10.3 260 527-806 26-300 (322)
169 1byg_A CSK, protein (C-termina 100.0 6E-38 2.1E-42 336.0 12.8 249 528-805 23-273 (278)
170 3llt_A Serine/threonine kinase 100.0 3.4E-37 1.2E-41 343.0 19.1 263 525-799 34-356 (360)
171 2jii_A Serine/threonine-protei 100.0 2.5E-37 8.6E-42 343.3 17.9 261 527-806 43-337 (352)
172 3oz6_A Mitogen-activated prote 100.0 2E-37 6.9E-42 348.8 17.4 260 527-799 10-329 (388)
173 3eb0_A Putative uncharacterize 100.0 5.5E-38 1.9E-42 352.8 12.5 266 528-803 9-328 (383)
174 4aaa_A Cyclin-dependent kinase 100.0 5.5E-38 1.9E-42 345.4 12.3 264 528-799 27-307 (331)
175 2rku_A Serine/threonine-protei 100.0 4E-37 1.4E-41 332.4 18.4 246 528-799 17-266 (294)
176 3ttj_A Mitogen-activated prote 100.0 1.4E-37 4.9E-42 357.8 15.8 260 528-799 64-356 (464)
177 1t4h_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 330.5 19.3 245 529-799 29-283 (290)
178 3mtl_A Cell division protein k 100.0 4.9E-38 1.7E-42 344.9 10.8 259 529-799 5-282 (324)
179 3i6u_A CDS1, serine/threonine- 100.0 1.9E-37 6.3E-42 352.6 15.9 251 526-799 135-400 (419)
180 1ua2_A CAK, cell division prot 100.0 1.9E-37 6.5E-42 343.4 15.6 264 527-799 11-292 (346)
181 2clq_A Mitogen-activated prote 100.0 2.5E-37 8.5E-42 333.7 15.5 248 532-799 28-279 (295)
182 2owb_A Serine/threonine-protei 100.0 4.2E-37 1.5E-41 339.1 17.6 246 528-799 43-292 (335)
183 3byv_A Rhoptry kinase; malaria 100.0 3.2E-38 1.1E-42 353.9 8.7 240 529-799 76-360 (377)
184 1j1b_A Glycogen synthase kinas 100.0 1.3E-37 4.5E-42 354.0 13.5 259 528-799 56-337 (420)
185 2yfx_A Tyrosine-protein kinase 100.0 1.1E-37 3.9E-42 342.2 12.3 261 526-806 30-305 (327)
186 2vgo_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 332.7 14.3 244 528-799 16-263 (284)
187 3lij_A Calcium/calmodulin depe 100.0 6E-37 2E-41 356.1 18.8 250 526-799 37-292 (494)
188 3a7i_A MST3 kinase, serine/thr 100.0 2.2E-37 7.6E-42 335.9 14.2 247 528-800 24-272 (303)
189 3mwu_A Calmodulin-domain prote 100.0 5.9E-37 2E-41 355.4 18.0 250 526-799 22-277 (486)
190 2vwi_A Serine/threonine-protei 100.0 2.3E-37 7.9E-42 335.1 13.6 261 528-799 17-288 (303)
191 2h6d_A 5'-AMP-activated protei 100.0 3.5E-37 1.2E-41 329.3 14.7 245 528-799 13-262 (276)
192 3eqc_A Dual specificity mitoge 100.0 2.1E-37 7.1E-42 344.8 13.3 263 528-799 35-325 (360)
193 3nyv_A Calmodulin-domain prote 100.0 3.8E-37 1.3E-41 356.8 15.9 251 525-799 25-282 (484)
194 1u46_A ACK-1, activated CDC42 100.0 1.5E-37 5.2E-42 334.7 11.6 255 528-805 20-284 (291)
195 4e7w_A Glycogen synthase kinas 100.0 3.9E-37 1.3E-41 347.1 15.2 262 528-799 42-322 (394)
196 3sv0_A Casein kinase I-like; t 100.0 1.5E-36 5E-41 350.0 20.3 260 528-806 9-279 (483)
197 2y7j_A Phosphorylase B kinase 100.0 8.1E-37 2.8E-41 341.0 17.3 250 527-799 95-360 (365)
198 3q60_A ROP5B; pseudokinase, tr 100.0 2.9E-37 1E-41 345.3 13.6 251 529-799 65-353 (371)
199 3com_A Serine/threonine-protei 100.0 2.4E-36 8.1E-41 329.4 20.5 250 526-799 29-279 (314)
200 3mi9_A Cell division protein k 100.0 5.9E-37 2E-41 340.0 15.7 265 527-799 18-312 (351)
201 1cm8_A Phosphorylated MAP kina 100.0 8.3E-37 2.9E-41 341.1 16.6 256 528-799 27-308 (367)
202 2j7t_A Serine/threonine-protei 100.0 6.6E-37 2.3E-41 331.7 15.3 250 528-799 21-276 (302)
203 3nsz_A CK II alpha, casein kin 100.0 1.4E-36 4.6E-41 333.7 17.8 256 527-799 37-320 (330)
204 2ycf_A Serine/threonine-protei 100.0 1E-36 3.5E-41 333.9 16.7 252 525-799 9-275 (322)
205 3fme_A Dual specificity mitoge 100.0 1.8E-37 6E-42 334.0 10.4 252 528-799 9-267 (290)
206 3pfq_A PKC-B, PKC-beta, protei 100.0 5.1E-37 1.8E-41 368.4 15.6 246 528-799 343-598 (674)
207 3n9x_A Phosphotransferase; mal 100.0 2.2E-36 7.4E-41 345.3 19.8 196 528-731 28-253 (432)
208 3rp9_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41 354.2 13.7 192 527-726 54-280 (458)
209 2r3i_A Cell division protein k 100.0 8.7E-37 3E-41 330.3 15.3 261 529-799 6-284 (299)
210 1phk_A Phosphorylase kinase; g 100.0 1.3E-36 4.6E-41 328.6 16.6 249 528-799 19-284 (298)
211 1wak_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 344.9 14.4 272 518-799 29-392 (397)
212 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-36 4.1E-41 354.4 17.0 249 527-799 37-302 (504)
213 2xrw_A Mitogen-activated prote 100.0 2E-36 7E-41 338.5 17.9 260 528-799 27-319 (371)
214 3pg1_A Mitogen-activated prote 100.0 3.2E-37 1.1E-41 343.5 11.1 261 528-799 24-317 (362)
215 3qyz_A Mitogen-activated prote 100.0 2.5E-36 8.7E-41 336.8 18.2 262 528-799 29-314 (364)
216 3an0_A Dual specificity mitoge 100.0 3.3E-37 1.1E-41 340.3 10.7 251 529-799 54-311 (340)
217 3kvw_A DYRK2, dual specificity 100.0 7.4E-37 2.5E-41 348.7 13.8 196 528-734 99-303 (429)
218 2j0j_A Focal adhesion kinase 1 100.0 1E-36 3.5E-41 364.8 15.4 258 526-807 390-653 (656)
219 2pml_X PFPK7, Ser/Thr protein 100.0 1.6E-36 5.6E-41 335.6 15.9 258 528-799 33-323 (348)
220 3e3p_A Protein kinase, putativ 100.0 1.9E-36 6.4E-41 336.8 16.1 266 527-799 24-315 (360)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.9E-36 6.5E-41 330.8 15.7 254 528-806 35-303 (319)
222 2wtk_C Serine/threonine-protei 100.0 1.9E-36 6.5E-41 328.6 15.3 248 528-799 7-264 (305)
223 2x7f_A TRAF2 and NCK-interacti 100.0 6.2E-36 2.1E-40 327.9 19.5 249 528-799 26-287 (326)
224 1blx_A Cyclin-dependent kinase 100.0 2.3E-36 7.8E-41 331.2 15.3 264 528-799 13-297 (326)
225 3rgf_A Cyclin-dependent kinase 100.0 3.7E-36 1.3E-40 340.4 17.5 263 531-799 26-334 (405)
226 1zy4_A Serine/threonine-protei 100.0 7E-36 2.4E-40 323.0 18.4 250 527-799 7-284 (303)
227 2fst_X Mitogen-activated prote 100.0 1.6E-36 5.5E-41 338.7 13.4 254 528-799 31-312 (367)
228 3cek_A Dual specificity protei 100.0 1.4E-36 4.8E-41 331.3 12.3 249 528-800 30-294 (313)
229 2i6l_A Mitogen-activated prote 100.0 5.6E-36 1.9E-40 326.6 17.0 262 528-799 13-306 (320)
230 2b9h_A MAP kinase FUS3, mitoge 100.0 8.5E-37 2.9E-41 338.6 10.6 259 528-799 13-306 (353)
231 2wei_A Calmodulin-domain prote 100.0 7.5E-36 2.6E-40 321.4 16.6 252 524-799 20-277 (287)
232 4exu_A Mitogen-activated prote 100.0 6.4E-36 2.2E-40 334.5 16.6 258 528-799 44-324 (371)
233 1z57_A Dual specificity protei 100.0 1.3E-35 4.5E-40 326.2 18.4 262 527-799 15-329 (339)
234 2vx3_A Dual specificity tyrosi 100.0 2.7E-35 9.1E-40 330.8 20.8 199 527-734 55-262 (382)
235 2rio_A Serine/threonine-protei 100.0 1.2E-35 4E-40 339.4 17.8 249 531-799 20-296 (434)
236 2iwi_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 327.5 11.8 244 522-799 27-284 (312)
237 3a99_A Proto-oncogene serine/t 100.0 4.7E-36 1.6E-40 328.5 11.4 243 527-803 44-300 (320)
238 3coi_A Mitogen-activated prote 100.0 1.7E-35 6E-40 328.5 16.0 255 528-799 26-306 (353)
239 3aln_A Dual specificity mitoge 100.0 9.9E-36 3.4E-40 326.7 13.7 254 529-799 25-286 (327)
240 1q8y_A SR protein kinase; tran 100.0 1.5E-35 5E-40 331.1 15.3 263 527-799 20-334 (373)
241 3fhr_A MAP kinase-activated pr 100.0 2.3E-35 7.8E-40 325.4 16.6 247 531-799 34-288 (336)
242 2eu9_A Dual specificity protei 100.0 2.3E-35 7.8E-40 326.7 15.9 263 526-799 19-334 (355)
243 3p23_A Serine/threonine-protei 100.0 4.8E-35 1.6E-39 333.7 17.4 246 529-799 27-284 (432)
244 2dyl_A Dual specificity mitoge 100.0 1.2E-34 4.2E-39 316.1 16.4 248 529-799 28-284 (318)
245 2pzi_A Probable serine/threoni 100.0 2.5E-34 8.7E-39 346.8 19.9 240 526-805 80-328 (681)
246 3qa8_A MGC80376 protein; kinas 100.0 5.7E-35 2E-39 344.4 12.3 267 526-804 14-308 (676)
247 3uqc_A Probable conserved tran 100.0 3.5E-34 1.2E-38 308.6 15.3 232 526-806 31-266 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 4.9E-34 1.7E-38 323.8 16.9 239 530-799 82-364 (413)
249 2vuw_A Serine/threonine-protei 100.0 4.8E-34 1.6E-38 314.7 10.4 245 524-799 18-332 (336)
250 3m2w_A MAP kinase-activated pr 100.0 7.4E-33 2.5E-37 300.0 19.4 222 531-799 23-257 (299)
251 4azs_A Methyltransferase WBDD; 99.9 3E-28 1E-32 286.4 5.7 186 533-730 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 4.3E-25 1.5E-29 258.1 8.0 182 531-730 341-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 1E-21 3.4E-26 210.6 9.1 141 531-704 95-253 (282)
254 3rgz_A Protein brassinosteroid 99.7 7.6E-19 2.6E-23 214.7 7.5 114 338-451 629-744 (768)
255 1zth_A RIO1 serine protein kin 99.7 5.1E-18 1.7E-22 179.4 11.0 134 530-679 51-219 (258)
256 1ogq_A PGIP-2, polygalacturona 99.7 4E-18 1.4E-22 185.5 6.1 182 263-451 123-308 (313)
257 4fcg_A Uncharacterized protein 99.7 1.6E-17 5.4E-22 182.0 8.0 109 339-448 181-291 (328)
258 1p9a_G Platelet glycoprotein I 99.7 1E-16 3.4E-21 172.5 13.5 156 264-451 54-212 (290)
259 3m19_A Variable lymphocyte rec 99.7 3E-16 1E-20 164.9 15.2 156 265-450 35-195 (251)
260 2v9t_B SLIT homolog 2 protein 99.7 2.1E-16 7.1E-21 162.8 13.3 152 268-451 14-169 (220)
261 2o6q_A Variable lymphocyte rec 99.7 1.1E-16 3.6E-21 170.3 11.2 179 266-451 38-222 (270)
262 1ozn_A Reticulon 4 receptor; N 99.7 6.3E-17 2.2E-21 173.3 8.7 113 338-451 126-242 (285)
263 3oja_A Leucine-rich immune mol 99.7 1.3E-17 4.6E-22 192.6 3.4 171 264-449 57-252 (487)
264 2v70_A SLIT-2, SLIT homolog 2 99.7 2E-16 6.8E-21 162.9 11.9 154 268-451 14-170 (220)
265 3zyj_A Leucine-rich repeat-con 99.7 1.1E-16 3.8E-21 182.5 10.6 180 264-451 111-296 (440)
266 3rfs_A Internalin B, repeat mo 99.7 3.4E-16 1.2E-20 166.6 12.8 179 264-451 40-222 (272)
267 3rgz_A Protein brassinosteroid 99.6 1E-16 3.5E-21 195.9 8.3 83 364-446 631-716 (768)
268 3zyi_A Leucine-rich repeat-con 99.6 2.8E-16 9.4E-21 179.9 10.2 180 264-451 122-307 (452)
269 1ogq_A PGIP-2, polygalacturona 99.6 1.9E-16 6.4E-21 172.3 7.6 177 263-447 99-281 (313)
270 3e6j_A Variable lymphocyte rec 99.6 1.6E-15 5.4E-20 157.2 14.0 151 268-451 22-176 (229)
271 1p9a_G Platelet glycoprotein I 99.6 7.5E-16 2.6E-20 165.6 11.8 172 265-447 10-185 (290)
272 4fcg_A Uncharacterized protein 99.6 1.2E-16 4E-21 175.1 5.1 176 264-447 80-266 (328)
273 2z66_A Variable lymphocyte rec 99.6 1.9E-16 6.6E-21 171.3 6.6 182 264-451 77-265 (306)
274 1w8a_A SLIT protein; signaling 99.6 2.1E-15 7.2E-20 151.8 10.3 154 268-451 11-166 (192)
275 1ozn_A Reticulon 4 receptor; N 99.6 1.2E-15 4.2E-20 163.3 8.6 177 265-446 32-213 (285)
276 3v47_A TOLL-like receptor 5B a 99.6 6.5E-15 2.2E-19 168.3 14.8 186 265-451 180-412 (455)
277 2z62_A TOLL-like receptor 4, v 99.6 7.6E-16 2.6E-20 164.0 6.1 179 265-451 52-241 (276)
278 4gyi_A RIO2 kinase; protein ki 99.6 5.6E-16 1.9E-20 170.8 5.1 135 529-678 98-264 (397)
279 3vq2_A TLR4, TOLL-like recepto 99.6 9.1E-16 3.1E-20 182.2 6.9 182 263-451 374-562 (606)
280 2xot_A Amphoterin-induced prot 99.6 3.3E-15 1.1E-19 165.7 10.2 155 266-451 40-206 (361)
281 3m19_A Variable lymphocyte rec 99.6 1.8E-14 6.2E-19 151.3 14.1 149 267-447 16-168 (251)
282 3o6n_A APL1; leucine-rich repe 99.6 2.4E-15 8.2E-20 168.5 7.6 181 264-449 140-354 (390)
283 3oja_B Anopheles plasmodium-re 99.6 2.3E-15 8E-20 178.5 7.9 182 263-449 145-360 (597)
284 2v70_A SLIT-2, SLIT homolog 2 99.6 1.2E-14 4E-19 149.7 12.0 138 266-432 33-173 (220)
285 2o6s_A Variable lymphocyte rec 99.6 2.7E-14 9.3E-19 145.3 14.6 109 340-449 51-163 (208)
286 2o6s_A Variable lymphocyte rec 99.5 2.1E-14 7.2E-19 146.1 11.7 146 265-444 28-175 (208)
287 3rfs_A Internalin B, repeat mo 99.5 1.1E-14 3.8E-19 154.9 9.9 168 265-444 63-232 (272)
288 2id5_A Lingo-1, leucine rich r 99.5 4.1E-15 1.4E-19 171.3 7.1 182 264-451 151-337 (477)
289 1w8a_A SLIT protein; signaling 99.5 2E-14 7E-19 144.5 11.2 111 341-451 29-143 (192)
290 4eco_A Uncharacterized protein 99.5 2.1E-14 7.3E-19 171.4 13.1 182 266-450 403-603 (636)
291 3zyi_A Leucine-rich repeat-con 99.5 1.1E-14 3.7E-19 166.7 10.0 178 263-447 97-279 (452)
292 4ezg_A Putative uncharacterize 99.5 1.3E-14 4.3E-19 146.6 9.3 149 263-446 42-193 (197)
293 2wfh_A SLIT homolog 2 protein 99.5 2.2E-14 7.5E-19 144.5 10.7 109 341-451 31-143 (193)
294 1xku_A Decorin; proteoglycan, 99.5 1.5E-14 5E-19 158.3 10.0 174 265-448 121-307 (330)
295 2o6q_A Variable lymphocyte rec 99.5 1.6E-14 5.5E-19 153.4 10.0 171 267-446 18-193 (270)
296 3e6j_A Variable lymphocyte rec 99.5 4.8E-14 1.6E-18 146.0 13.2 136 265-429 40-176 (229)
297 2z66_A Variable lymphocyte rec 99.5 7.9E-15 2.7E-19 158.6 7.4 175 265-445 28-210 (306)
298 2ell_A Acidic leucine-rich nuc 99.5 2E-14 6.7E-19 141.1 9.5 136 264-431 23-165 (168)
299 2v9t_B SLIT homolog 2 protein 99.5 3.4E-14 1.2E-18 146.1 11.6 134 265-427 32-167 (220)
300 2z80_A TOLL-like receptor 2, v 99.5 9.1E-15 3.1E-19 161.6 7.6 181 264-450 99-317 (353)
301 1xku_A Decorin; proteoglycan, 99.5 1.8E-14 6.1E-19 157.6 9.6 177 263-448 98-277 (330)
302 3zyj_A Leucine-rich repeat-con 99.5 2.1E-14 7.1E-19 163.7 9.9 178 263-447 86-268 (440)
303 1h6u_A Internalin H; cell adhe 99.5 1.6E-14 5.3E-19 156.7 8.4 170 264-448 62-231 (308)
304 2z62_A TOLL-like receptor 4, v 99.5 5.3E-14 1.8E-18 149.7 12.0 153 265-446 28-189 (276)
305 2xwt_C Thyrotropin receptor; s 99.5 7.4E-15 2.5E-19 152.9 5.2 151 264-446 79-238 (239)
306 1wwl_A Monocyte differentiatio 99.5 5.3E-15 1.8E-19 160.7 4.2 174 264-445 94-285 (312)
307 3t6q_A CD180 antigen; protein- 99.5 1.2E-14 4E-19 172.6 7.3 113 338-451 446-564 (606)
308 2z63_A TOLL-like receptor 4, v 99.5 3.1E-14 1.1E-18 167.4 10.1 183 263-452 345-536 (570)
309 4ecn_A Leucine-rich repeat pro 99.5 6E-14 2E-18 171.6 12.9 107 340-448 727-841 (876)
310 2xot_A Amphoterin-induced prot 99.5 7.3E-14 2.5E-18 154.9 12.2 147 268-446 21-175 (361)
311 4g8a_A TOLL-like receptor 4; l 99.5 5.7E-14 1.9E-18 167.0 11.7 183 263-451 395-584 (635)
312 1wwl_A Monocyte differentiatio 99.5 5E-15 1.7E-19 160.9 2.2 105 338-447 198-309 (312)
313 3o6n_A APL1; leucine-rich repe 99.5 8.5E-14 2.9E-18 155.9 11.5 158 259-446 39-198 (390)
314 3oja_B Anopheles plasmodium-re 99.5 7.7E-14 2.6E-18 165.4 11.6 158 259-446 45-204 (597)
315 4ecn_A Leucine-rich repeat pro 99.5 4.2E-14 1.4E-18 173.0 9.4 141 300-445 269-526 (876)
316 3o53_A Protein LRIM1, AGAP0063 99.5 1.5E-14 5.1E-19 157.4 4.9 107 340-449 143-252 (317)
317 2z81_A CD282 antigen, TOLL-lik 99.5 4.8E-14 1.6E-18 165.1 9.6 177 265-450 310-513 (549)
318 2ft3_A Biglycan; proteoglycan, 99.5 2.3E-14 7.8E-19 156.9 6.3 173 265-448 123-308 (332)
319 2o6r_A Variable lymphocyte rec 99.5 1.7E-13 5.7E-18 135.7 11.9 121 329-450 8-140 (177)
320 4eco_A Uncharacterized protein 99.5 5.9E-14 2E-18 167.6 10.2 176 263-446 247-445 (636)
321 1dce_A Protein (RAB geranylger 99.5 7.9E-15 2.7E-19 172.1 2.6 179 263-447 347-546 (567)
322 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 8.5E-14 2.9E-18 163.8 11.4 158 263-451 351-514 (562)
323 2id5_A Lingo-1, leucine rich r 99.5 2.9E-14 9.8E-19 164.2 7.1 176 266-447 33-213 (477)
324 3v47_A TOLL-like receptor 5B a 99.5 7.5E-14 2.6E-18 159.5 10.4 39 264-302 78-117 (455)
325 4g8a_A TOLL-like receptor 4; l 99.5 1.4E-13 4.6E-18 163.7 12.6 153 265-446 52-213 (635)
326 2ft3_A Biglycan; proteoglycan, 99.5 4.1E-14 1.4E-18 154.9 7.2 176 263-448 100-278 (332)
327 2z7x_B TOLL-like receptor 1, v 99.5 1.3E-13 4.3E-18 160.5 11.7 155 263-450 322-484 (520)
328 1h6u_A Internalin H; cell adhe 99.5 9.1E-14 3.1E-18 150.6 9.5 170 263-447 39-208 (308)
329 1h6t_A Internalin B; cell adhe 99.4 9E-14 3.1E-18 149.4 8.9 105 338-448 109-214 (291)
330 2wfh_A SLIT homolog 2 protein 99.4 1.6E-13 5.6E-18 138.0 10.3 129 268-428 13-142 (193)
331 2z80_A TOLL-like receptor 2, v 99.4 1.4E-14 4.9E-19 160.0 2.7 171 266-444 53-232 (353)
332 1ziw_A TOLL-like receptor 3; i 99.4 9.2E-14 3.1E-18 167.3 9.8 112 340-451 503-626 (680)
333 4glp_A Monocyte differentiatio 99.4 2.1E-14 7.2E-19 155.7 3.7 177 263-446 89-284 (310)
334 2o6r_A Variable lymphocyte rec 99.4 5.1E-13 1.7E-17 132.2 13.1 131 268-429 10-141 (177)
335 1m9s_A Internalin B; cell inva 99.4 1.5E-13 5.3E-18 162.2 10.8 169 264-448 42-211 (605)
336 3t6q_A CD180 antigen; protein- 99.4 1.5E-13 5E-18 163.1 10.3 177 264-446 277-461 (606)
337 3vq2_A TLR4, TOLL-like recepto 99.4 2.4E-13 8.3E-18 161.2 12.1 154 265-447 32-194 (606)
338 3g39_A Variable lymphocyte rec 99.4 1.9E-13 6.6E-18 134.5 9.3 106 342-451 10-119 (170)
339 4fmz_A Internalin; leucine ric 99.4 1.1E-13 3.8E-18 152.2 8.4 169 264-445 176-344 (347)
340 4glp_A Monocyte differentiatio 99.4 1.7E-13 5.9E-18 148.5 9.7 156 263-448 143-308 (310)
341 2xwt_C Thyrotropin receptor; s 99.4 1.3E-13 4.4E-18 143.5 7.4 149 266-445 32-190 (239)
342 1xeu_A Internalin C; cellular 99.4 3.7E-13 1.3E-17 142.4 10.6 146 264-449 40-187 (263)
343 2je0_A Acidic leucine-rich nuc 99.4 1.2E-13 4.3E-18 132.4 6.0 127 264-421 16-149 (149)
344 2r9u_A Variable lymphocyte rec 99.4 4.9E-13 1.7E-17 132.2 9.7 105 343-451 14-122 (174)
345 1ziw_A TOLL-like receptor 3; i 99.4 4.7E-13 1.6E-17 161.0 10.9 151 265-444 25-181 (680)
346 1h6t_A Internalin B; cell adhe 99.4 3.7E-13 1.3E-17 144.6 8.9 157 264-436 67-223 (291)
347 3oja_A Leucine-rich immune mol 99.4 1.2E-13 4.1E-18 159.5 4.7 175 264-446 33-226 (487)
348 3j0a_A TOLL-like receptor 5; m 99.4 6.5E-13 2.2E-17 163.9 10.9 151 265-444 24-184 (844)
349 2z63_A TOLL-like receptor 4, v 99.4 9.9E-13 3.4E-17 154.5 11.8 154 265-447 28-190 (570)
350 2z7x_B TOLL-like receptor 1, v 99.4 6.2E-13 2.1E-17 154.7 9.5 145 268-446 3-150 (520)
351 2r9u_A Variable lymphocyte rec 99.4 2.3E-12 7.8E-17 127.4 11.4 90 341-431 33-123 (174)
352 4b8c_D Glucose-repressible alc 99.4 1.4E-13 4.8E-18 166.4 3.0 132 269-432 205-336 (727)
353 1m9s_A Internalin B; cell inva 99.4 6.8E-13 2.3E-17 156.7 8.8 158 263-436 63-220 (605)
354 2ell_A Acidic leucine-rich nuc 99.4 9.7E-13 3.3E-17 128.9 8.4 105 340-446 23-132 (168)
355 3o53_A Protein LRIM1, AGAP0063 99.4 1.3E-13 4.3E-18 150.1 2.3 153 264-447 119-275 (317)
356 2je0_A Acidic leucine-rich nuc 99.4 7.5E-13 2.6E-17 126.9 7.3 105 340-446 16-125 (149)
357 2z81_A CD282 antigen, TOLL-lik 99.4 1.6E-13 5.6E-18 160.6 3.1 174 265-445 26-207 (549)
358 4ezg_A Putative uncharacterize 99.3 1.1E-12 3.7E-17 132.3 8.5 130 264-426 65-195 (197)
359 3j0a_A TOLL-like receptor 5; m 99.3 1.2E-12 4.1E-17 161.5 10.5 105 341-446 266-374 (844)
360 4fmz_A Internalin; leucine ric 99.3 1.3E-12 4.5E-17 143.6 9.7 169 264-447 154-324 (347)
361 4b8c_D Glucose-repressible alc 99.3 7.2E-13 2.5E-17 160.2 7.9 159 261-447 169-329 (727)
362 1xeu_A Internalin C; cellular 99.3 1.4E-12 4.7E-17 138.0 9.0 133 264-435 62-194 (263)
363 1o6v_A Internalin A; bacterial 99.3 1.5E-12 5.2E-17 149.4 9.7 105 339-448 285-389 (466)
364 3cvr_A Invasion plasmid antige 99.3 3.3E-12 1.1E-16 149.3 12.5 135 264-446 99-242 (571)
365 1dce_A Protein (RAB geranylger 99.3 2E-12 6.8E-17 151.7 10.4 100 339-440 461-566 (567)
366 1a9n_A U2A', U2A'; complex (nu 99.3 1.7E-12 5.6E-17 128.4 7.6 130 264-425 18-153 (176)
367 3g39_A Variable lymphocyte rec 99.3 4.1E-12 1.4E-16 124.9 9.7 89 341-429 30-119 (170)
368 1o6v_A Internalin A; bacterial 99.3 3E-12 1E-16 147.0 9.9 168 264-446 176-343 (466)
369 3bz5_A Internalin-J, INLJ; leu 99.3 5.3E-12 1.8E-16 144.4 11.9 160 264-444 105-264 (457)
370 2ifg_A High affinity nerve gro 99.3 2.7E-12 9.2E-17 141.3 8.8 104 345-451 12-120 (347)
371 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 2E-12 6.9E-17 152.0 8.2 145 268-446 34-181 (562)
372 2ca6_A RAN GTPase-activating p 99.3 1.8E-13 6.3E-18 153.0 -0.6 181 263-447 92-316 (386)
373 3cvr_A Invasion plasmid antige 99.3 4.4E-12 1.5E-16 148.3 10.5 154 266-447 60-220 (571)
374 3bz5_A Internalin-J, INLJ; leu 99.3 6.6E-12 2.2E-16 143.7 11.0 162 264-445 41-202 (457)
375 3g06_A SSPH2 (leucine-rich rep 99.2 4.2E-11 1.4E-15 141.6 15.6 93 342-446 202-296 (622)
376 1a9n_A U2A', U2A'; complex (nu 99.2 1.1E-11 3.7E-16 122.5 8.6 104 340-447 18-126 (176)
377 3g06_A SSPH2 (leucine-rich rep 99.2 7.3E-11 2.5E-15 139.6 17.1 74 365-447 201-274 (622)
378 2ast_B S-phase kinase-associat 99.2 7.2E-13 2.5E-17 144.9 -1.4 176 264-444 92-282 (336)
379 4ay9_X Follicle-stimulating ho 99.2 3.7E-12 1.3E-16 140.5 3.3 176 265-447 30-236 (350)
380 1jl5_A Outer protein YOPM; leu 99.2 6.2E-11 2.1E-15 135.4 13.2 138 265-445 131-268 (454)
381 2ca6_A RAN GTPase-activating p 99.2 5.2E-12 1.8E-16 141.1 3.7 177 264-446 59-286 (386)
382 3tm0_A Aminoglycoside 3'-phosp 99.2 1.2E-10 4.1E-15 122.7 12.6 138 530-677 18-212 (263)
383 1jl5_A Outer protein YOPM; leu 99.2 1.1E-10 3.8E-15 133.3 13.0 135 266-445 92-226 (454)
384 2ifg_A High affinity nerve gro 99.1 8.2E-11 2.8E-15 129.3 10.2 98 329-427 9-118 (347)
385 2ast_B S-phase kinase-associat 99.1 4.7E-12 1.6E-16 138.4 -0.3 177 265-447 70-260 (336)
386 1ds9_A Outer arm dynein; leuci 99.1 7.7E-13 2.6E-17 133.5 -6.1 122 275-430 35-158 (198)
387 3goz_A Leucine-rich repeat-con 99.1 7.5E-12 2.6E-16 138.7 -0.4 176 265-446 22-237 (362)
388 1nd4_A Aminoglycoside 3'-phosp 99.0 6.3E-10 2.1E-14 116.5 10.4 130 533-677 26-213 (264)
389 3goz_A Leucine-rich repeat-con 99.0 2.3E-11 7.7E-16 134.8 -0.8 176 265-446 80-296 (362)
390 1z7x_W Ribonuclease inhibitor; 99.0 2.6E-11 8.8E-16 138.5 -3.4 137 265-425 199-354 (461)
391 1ds9_A Outer arm dynein; leuci 98.9 1.6E-11 5.6E-16 123.7 -6.0 106 339-449 46-155 (198)
392 1z7x_W Ribonuclease inhibitor; 98.9 1.5E-10 5E-15 132.2 1.1 158 264-445 27-210 (461)
393 3dxp_A Putative acyl-COA dehyd 98.9 4.5E-09 1.5E-13 116.1 10.0 140 532-678 44-248 (359)
394 4ay9_X Follicle-stimulating ho 98.8 2.8E-09 9.5E-14 117.4 7.8 116 330-446 11-140 (350)
395 3un9_A NLR family member X1; l 98.8 5.3E-10 1.8E-14 124.2 -0.8 45 264-308 71-121 (372)
396 3sg8_A APH(2'')-ID; antibiotic 98.8 3.1E-09 1.1E-13 114.5 5.0 186 532-732 26-289 (304)
397 3sb4_A Hypothetical leucine ri 98.7 6.7E-09 2.3E-13 113.2 6.4 94 340-436 225-320 (329)
398 3un9_A NLR family member X1; l 98.7 2.1E-09 7.3E-14 119.3 1.1 139 265-427 101-254 (372)
399 3sb4_A Hypothetical leucine ri 98.6 8.3E-08 2.8E-12 104.5 8.9 79 364-445 225-308 (329)
400 2jwp_A Malectin, MGC80075; sug 98.6 5.2E-08 1.8E-12 95.8 6.3 154 119-291 7-170 (174)
401 3rw6_A Nuclear RNA export fact 98.4 9.3E-08 3.2E-12 100.3 3.9 65 340-405 169-237 (267)
402 3ogk_B Coronatine-insensitive 98.4 6E-08 2.1E-12 114.2 1.1 106 340-445 377-499 (592)
403 3d1u_A Putative fructosamine-3 98.3 2.2E-06 7.7E-11 91.3 11.9 74 532-609 21-97 (288)
404 3rw6_A Nuclear RNA export fact 98.3 1E-07 3.5E-12 99.9 0.8 86 342-430 142-238 (267)
405 3r70_A Aminoglycoside phosphot 98.3 1.6E-06 5.5E-11 93.9 9.9 131 532-678 43-237 (320)
406 3ogk_B Coronatine-insensitive 98.3 1.1E-07 3.8E-12 111.9 0.3 179 263-445 110-304 (592)
407 2p1m_B Transport inhibitor res 98.3 2.9E-08 9.8E-13 116.9 -5.3 182 263-446 287-493 (594)
408 4gkh_A Aminoglycoside 3'-phosp 98.2 7.2E-06 2.5E-10 86.1 12.4 134 533-677 31-222 (272)
409 3tdw_A Gentamicin resistance p 98.2 6.2E-06 2.1E-10 88.7 11.6 135 532-678 25-224 (306)
410 3ats_A Putative uncharacterize 98.1 5.4E-06 1.8E-10 91.0 9.5 79 532-610 26-121 (357)
411 2jwp_A Malectin, MGC80075; sug 98.1 1.9E-05 6.7E-10 77.3 11.6 97 1-101 58-171 (174)
412 1io0_A Tropomodulin; LRR prote 98.1 9.7E-07 3.3E-11 87.6 1.9 118 283-425 31-164 (185)
413 2ra8_A Uncharacterized protein 98.1 1.7E-06 5.7E-11 95.3 3.9 104 341-444 193-317 (362)
414 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.6E-05 5.5E-10 87.6 11.0 141 532-678 47-243 (362)
415 4fdw_A Leucine rich hypothetic 97.9 1.1E-05 3.7E-10 90.3 7.9 170 264-446 179-357 (401)
416 1io0_A Tropomodulin; LRR prote 97.9 1.2E-06 4.3E-11 86.8 -0.2 106 340-445 35-162 (185)
417 2p1m_B Transport inhibitor res 97.9 1.1E-06 3.7E-11 103.4 -0.8 31 341-372 211-242 (594)
418 2ra8_A Uncharacterized protein 97.9 2.9E-06 9.8E-11 93.4 1.2 62 364-425 251-320 (362)
419 2q83_A YTAA protein; 2635576, 97.8 6.1E-05 2.1E-09 81.7 9.7 140 533-677 39-251 (346)
420 2olc_A MTR kinase, methylthior 97.7 0.0001 3.6E-09 82.0 10.4 74 532-607 36-120 (397)
421 3f7w_A Putative fructosamine-3 97.6 0.00016 5.5E-09 76.6 10.6 73 532-608 21-96 (288)
422 4fdw_A Leucine rich hypothetic 97.6 6.6E-05 2.3E-09 83.8 6.8 156 265-434 203-366 (401)
423 3jr1_A Putative fructosamine-3 97.5 0.00028 9.5E-09 75.8 10.4 74 532-609 42-118 (312)
424 2pyw_A Uncharacterized protein 97.5 0.00013 4.4E-09 82.0 7.2 79 648-727 232-313 (420)
425 3e4g_A ATP synthase subunit S, 97.1 7.9E-05 2.7E-09 72.6 0.5 85 341-425 61-153 (176)
426 3csv_A Aminoglycoside phosphot 97.1 0.0022 7.6E-08 69.2 11.3 141 533-678 25-217 (333)
427 3rfe_A Platelet glycoprotein I 96.8 0.0014 4.8E-08 60.6 6.2 36 389-424 32-67 (130)
428 2ppq_A HSK, HK, homoserine kin 96.8 0.0024 8E-08 68.6 9.0 143 532-677 28-216 (322)
429 3dxq_A Choline/ethanolamine ki 96.8 0.0034 1.2E-07 66.8 9.4 70 532-609 24-95 (301)
430 3rfe_A Platelet glycoprotein I 96.8 0.0015 5.2E-08 60.4 5.7 56 344-401 11-68 (130)
431 1nw1_A Choline kinase (49.2 KD 96.7 0.0029 1E-07 71.0 9.1 72 532-609 79-159 (429)
432 1zyl_A Hypothetical protein YI 96.5 0.011 3.6E-07 63.5 11.4 141 533-677 33-222 (328)
433 3feg_A Choline/ethanolamine ki 96.4 0.0071 2.4E-07 66.6 9.4 141 532-677 56-253 (379)
434 2qg7_A Ethanolamine kinase PV0 96.3 0.016 5.6E-07 65.4 11.8 73 532-609 114-188 (458)
435 3c5i_A Choline kinase; choline 96.2 0.0088 3E-07 65.5 8.7 73 532-609 39-121 (369)
436 3e4g_A ATP synthase subunit S, 96.1 0.0012 4.2E-08 64.1 0.9 93 356-448 52-153 (176)
437 3i1a_A Spectinomycin phosphotr 96.0 0.018 6.1E-07 62.4 9.9 68 535-609 32-108 (339)
438 1pgv_A TMD-1, tropomodulin TMD 95.8 0.0029 1E-07 62.6 1.8 57 342-398 71-136 (197)
439 4gt6_A Cell surface protein; l 95.4 0.033 1.1E-06 61.5 8.8 99 341-444 265-367 (394)
440 4fs7_A Uncharacterized protein 95.3 0.029 9.8E-07 62.0 8.2 80 340-422 296-376 (394)
441 3f2s_A CK, chetk-alpha, cholin 95.2 0.07 2.4E-06 58.9 10.5 141 533-677 59-279 (401)
442 1pgv_A TMD-1, tropomodulin TMD 95.1 0.0036 1.2E-07 61.9 0.1 83 341-423 41-137 (197)
443 4gt6_A Cell surface protein; l 95.0 0.036 1.2E-06 61.2 7.8 83 340-425 287-370 (394)
444 4h09_A Hypothetical leucine ri 94.9 0.052 1.8E-06 59.4 8.8 88 341-432 240-328 (379)
445 3mes_A Choline kinase; malaria 94.7 0.077 2.6E-06 59.1 9.4 73 532-609 76-157 (424)
446 4h09_A Hypothetical leucine ri 94.7 0.054 1.8E-06 59.3 8.1 91 340-434 262-353 (379)
447 2yle_A Protein spire homolog 1 94.4 0.23 7.8E-06 49.6 10.7 103 607-729 33-135 (229)
448 4fs7_A Uncharacterized protein 94.1 0.1 3.5E-06 57.5 8.8 97 341-444 276-376 (394)
449 3g15_A CK, chetk-alpha, cholin 85.8 2.6 8.8E-05 46.3 10.1 29 649-677 245-279 (401)
450 4ann_A ESSB; membrane protein, 78.6 4.4 0.00015 40.1 7.4 117 580-732 43-159 (215)
451 3cxl_A N-chimerin; SH2, RHO-GA 71.4 0.45 1.5E-05 53.6 -2.1 59 531-592 147-214 (463)
452 4ano_A ESSB; membrane protein, 69.4 7.4 0.00025 38.7 6.4 114 580-731 48-163 (219)
453 2ks1_B Epidermal growth factor 61.3 2.5 8.5E-05 30.5 0.8 12 458-469 11-22 (44)
454 2l2t_A Receptor tyrosine-prote 54.1 3.1 0.0001 30.0 0.3 12 459-470 11-22 (44)
455 2jwa_A Receptor tyrosine-prote 54.0 2.2 7.5E-05 30.7 -0.4 14 458-471 12-25 (44)
456 1nrp_R Receptor based peptide 37.0 12 0.00041 22.5 0.9 16 130-145 6-21 (26)
457 1nro_R Receptor based peptide 35.1 14 0.00048 22.3 1.0 16 130-145 6-21 (27)
458 2w3j_A Carbohydrate binding mo 26.5 3.6E+02 0.012 24.3 10.6 88 14-106 42-134 (145)
459 2lz0_A Uncharacterized protein 26.4 80 0.0027 26.8 4.9 37 384-421 16-52 (100)
460 2lz0_A Uncharacterized protein 25.6 1.3E+02 0.0045 25.4 6.2 48 351-399 6-54 (100)
461 2k9y_A Ephrin type-A receptor 23.0 18 0.00063 25.3 0.1 11 461-471 16-26 (41)
462 1cja_A Protein (actin-fragmin 22.0 3.2E+02 0.011 28.7 9.3 77 596-678 156-237 (342)
463 2k1k_A Ephrin type-A receptor 20.4 21 0.0007 24.8 -0.1 10 459-468 12-21 (38)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.3e-51 Score=445.72 Aligned_cols=257 Identities=26% Similarity=0.421 Sum_probs=205.7
Q ss_pred HhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35688999999999999875 478899999987666667789999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhccccc-----------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEE
Q 003046 603 FMHNGTLKEHLYGTLT-----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 671 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~ 671 (854)
||++|+|.++++.... ....++|.+++.|+.|||+||+|||+. +|+||||||+||||++++.+||+
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence 9999999999965321 234689999999999999999999998 99999999999999999999999
Q ss_pred EecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003046 672 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 672 DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|||+|+....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||...... .+...+
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~i--- 273 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----EAIDCI--- 273 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH----HHHHHH---
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH----HHHHHH---
Confidence 9999986544322 23345679999999999999999999999999999999999 99999765421 222222
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+... ..+......+.+|+.+||+.||++||||.||+++|+.+..
T Consensus 274 -~~g~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 274 -TQGREL---------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp -HHTCCC---------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -HcCCCC---------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 222111 1111223468899999999999999999999999998754
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3e-51 Score=442.74 Aligned_cols=256 Identities=27% Similarity=0.478 Sum_probs=210.7
Q ss_pred HhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|||
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 46789999999999999874 467899999987666667789999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccc---------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 603 FMHNGTLKEHLYGTL---------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
||++|+|.++|+... .....++|.+++.|+.|||+||+|||++ +|+||||||+||||++++.+||+||
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCc
Confidence 999999999996532 2245799999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003046 674 GLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.+.+.. .+... +.
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~----i~ 244 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIEC----IT 244 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHH----HH
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH----HH
Confidence 999865443222 2234569999999999999999999999999999999999 89999865421 22222 22
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+.... .+.....++.+|+.+||+.||++||||.||++.|+++.
T Consensus 245 ~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 245 QGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 222111 11122346889999999999999999999999999864
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.7e-52 Score=450.34 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=210.2
Q ss_pred HHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
..|.++||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 456789999999999999873 46789999997543 33457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcE
Q 003046 601 YEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 668 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~ 668 (854)
||||++|+|.++|.... .....++|..++.|+.|||+||+|||++ +||||||||+||||++++++
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 99999999999996432 1234689999999999999999999998 99999999999999999999
Q ss_pred EEEEecccccccCCC-cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHH
Q 003046 669 KVSDFGLSKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWA 746 (854)
Q Consensus 669 kL~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~ 746 (854)
||+|||+|+...... ........||+.|||||++.++.++.++|||||||+||||+| |+.||.+... ..+...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~----~~~~~~- 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDVVEM- 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----HHHHHH-
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----HHHHHH-
Confidence 999999998654332 223345679999999999999999999999999999999998 8999986542 223332
Q ss_pred HHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 747 KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 747 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+..+.... .+..+...+.+|+.+||+.||++||||.||+++|+..
T Consensus 260 ---i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 ---IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22222211 1122334688999999999999999999999999864
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-50 Score=432.72 Aligned_cols=254 Identities=31% Similarity=0.527 Sum_probs=199.3
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.++||+|+||+||+|+++ ..||||+++... ....+.|.+|+++|++++|||||+++|+|.+ +..++|||||++
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~g 115 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEG 115 (307)
T ss_dssp CEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSS
T ss_pred EEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCC
Confidence 35789999999999999976 369999987543 3345679999999999999999999999865 568999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC-cc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-SH 685 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~-~~ 685 (854)
|+|.++|+.. ...++|.+++.|+.|||+||+|||++ +||||||||+||||++++.+||+|||+|+...... ..
T Consensus 116 GsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 116 SSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999632 45699999999999999999999998 99999999999999999999999999998654332 22
Q ss_pred eeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 686 VSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|||||++.+ +.++.++|||||||+||||+||+.||.+..... .+. ..+..+.. .+.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~---~~~----~~~~~~~~----~p~ 258 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QII----FMVGRGYA----SPD 258 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHH----HHHHTTCC----CCC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH---HHH----HHHhcCCC----CCC
Confidence 3445679999999999964 468999999999999999999999997644111 111 11222211 111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+. .....+...+.+|+.+|++.+|++||||.||+++|+.+
T Consensus 259 ~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 259 LS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp ST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred cc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11 11122334688999999999999999999999999865
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.2e-49 Score=429.09 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=203.8
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
.+.++||+|+||+||+|+++ +|+.||||+++... ...+|+.+|++++|||||++++++.+++..++|||||++|
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 34678999999999999986 68999999997532 2357999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-cEEEEEecccccccCCCcc-
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGASH- 685 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~~~~~- 685 (854)
+|.++|. ....+++..+..++.||+.||+|||++ +|+||||||+||||+.++ ++||+|||+|+........
T Consensus 136 ~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 136 SLGQLIK----QMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp BHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999995 345799999999999999999999998 999999999999999987 6999999999876543211
Q ss_pred ---eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 686 ---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 686 ---~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+....+.. +...
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--------~~~~------ 274 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--------EPPP------ 274 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--------SCCG------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--------CCCC------
Confidence 22345799999999999999999999999999999999999999987653332222211 1100
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....+......+.+++.+|++.||++|||+.|++++|...+.
T Consensus 275 -~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 275 -IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp -GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 001111223457899999999999999999999999988764
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.9e-49 Score=431.12 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=205.7
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
.+.++||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||++|
T Consensus 77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 156 (346)
T 4fih_A 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156 (346)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred EEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 34568999999999999987 68999999998666566678999999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+....... ..
T Consensus 157 ~L~~~l~-----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 157 ALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp EHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred cHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 9999884 24689999999999999999999998 999999999999999999999999999987654322 33
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .+...+ ..+. .+.+..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i----~~~~-----~~~~~~-- 292 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMI----RDNL-----PPRLKN-- 292 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHH----HHSS-----CCCCSC--
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHH----HcCC-----CCCCCc--
Confidence 4567999999999999999999999999999999999999999765421 121211 1111 011110
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......+.+++.+|++.||++|||+.|+++|
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01122357899999999999999999999876
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-48 Score=420.94 Aligned_cols=266 Identities=23% Similarity=0.337 Sum_probs=202.8
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecC----eEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~~~lV~e~~ 604 (854)
.+.++||+|+||+||+|+++ |+.||||+++.... ....++.|+..+.+++|||||+++|+|..++ ..+||||||
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 45789999999999999985 89999999965422 2233455777778899999999999998764 579999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-----CCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
++|+|.++|+. ..++|..+.+++.|+|+||+|||+++ .++|+||||||+||||+.++++||+|||+|+..
T Consensus 84 ~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 84 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp TTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999953 45899999999999999999999863 358999999999999999999999999999876
Q ss_pred cCCCcce---eecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhCCccccccccccc-c------cchH
Q 003046 680 VDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISGQEAISNEKFGAN-C------RNIV 743 (854)
Q Consensus 680 ~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~-~------~~l~ 743 (854)
....... .....||+.|||||++.+. .++.++|||||||+||||+||+.|+......+. . ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5543322 2345799999999998754 477899999999999999999888754321110 0 0011
Q ss_pred HHHHHhhhcCCcccccCCcccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 744 QWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.........+ .++|.+... .+.+....+.+|+.+||+.||++||||.||++.|+++..
T Consensus 239 ~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 239 EEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1112111111 122333222 234566788999999999999999999999999998754
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.2e-48 Score=413.60 Aligned_cols=247 Identities=28% Similarity=0.423 Sum_probs=196.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee----cCeEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----~~~~~lV~ 601 (854)
.++++||+|+||+||+|.+. +++.||||++.... ......|.+|+++|++++|||||+++++|.. ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 35678999999999999886 58899999997542 2334678999999999999999999999865 34689999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEeccccccc
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAV 680 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~~~~ 680 (854)
|||++|+|.+++. ....+++..+..++.||+.||+|||++. ++|+||||||+||||+. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999995 3457899999999999999999999971 13999999999999984 7999999999998643
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.... ..+. ..+..+.....++
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~---~~~~----~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA---AQIY----RRVTSGVKPASFD 252 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---HHHH----HHHTTTCCCGGGG
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH---HHHH----HHHHcCCCCCCCC
Confidence 2 23345679999999998864 6999999999999999999999999754311 1111 1222221111111
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ..+.+++.+|++.||++|||+.|+++|
T Consensus 253 ----~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 ----KVAI----PEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----ccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112 347889999999999999999999875
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.8e-49 Score=434.88 Aligned_cols=265 Identities=26% Similarity=0.391 Sum_probs=212.7
Q ss_pred HHHHHHHhhccccccCcEEEEEEEECC------CcEEEEEEEecCCc-cchhchHHHHHHhhhcCC-CceeeEeeeeeec
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHH-RNLVQFLGYCQEE 594 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~~ 594 (854)
+....+.+.+.||+|+||+||+|++.. ++.||||+++.... ...+.|.+|+++|.++.| ||||+++|+|...
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 334455668899999999999998752 36799999976543 335679999999999965 9999999999764
Q ss_pred -CeEEEEEEecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeE
Q 003046 595 -GRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 595 -~~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
+..++|||||++|+|.++|+.... ....++|.+++.++.|||+||+|||++ +||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcccee
Confidence 568999999999999999965321 134589999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccc
Q 003046 662 LDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANC 739 (854)
Q Consensus 662 l~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~ 739 (854)
+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||+||||+| |+.||.+....+
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-- 295 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-- 295 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--
Confidence 999999999999999876544333 3345679999999999999999999999999999999998 999997654221
Q ss_pred cchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 740 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+. ..+.++.... .+.....++.+++.+||+.||++||||.||+++|+.+++.
T Consensus 296 -~~~----~~i~~g~~~~---------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 296 -EFC----RRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp -HHH----HHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHH----HHHHcCCCCC---------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 121 2222222111 1111234578899999999999999999999999998754
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.1e-49 Score=430.54 Aligned_cols=249 Identities=24% Similarity=0.390 Sum_probs=199.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..++|||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~ 105 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 556789999999999999986 68999999997553 233567899999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.++|... ....+++..++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+..... .
T Consensus 106 ~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 106 EGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp TTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 999999999532 244578889999999999999999998 9999999999999999999999999999865322 1
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+ +.. .. ..+... .+.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~---~i-~~~~~~-----~~~ 246 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN----LVL---KI-ISGSFP-----PVS 246 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHH---HH-HHTCCC-----CCC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHH---HH-HcCCCC-----CCC
Confidence 22344679999999999999999999999999999999999999998654221 111 11 112211 111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ..+.+|+.+|++.||++|||+.|+++|
T Consensus 247 ~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 LHYS----YDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2222 357899999999999999999999875
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.9e-48 Score=432.27 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=206.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
|.+.++||+|+||.||+|+++ +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..+||||||++
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 334578999999999999987 6899999999876666677899999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++. ...+++..+..|+.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+....... .
T Consensus 233 G~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 303 (423)
T 4fie_A 233 GALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 303 (423)
T ss_dssp EEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-C
T ss_pred CcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-c
Confidence 99999884 34589999999999999999999998 999999999999999999999999999986654322 3
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .+...+ ..+..... .....
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i----~~~~~~~~---~~~~~ 372 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMI----RDNLPPRL---KNLHK 372 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHH----HHSCCCCC---SCTTS
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHH----HcCCCCCC---ccccc
Confidence 34567999999999999999999999999999999999999999765421 111111 11111000 00111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ...+.+|+.+||+.||++|||+.|+++|
T Consensus 373 ~----s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 373 V----SPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp S----CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2 2357899999999999999999999876
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.4e-48 Score=421.42 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=206.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||+||+|+.+ +++.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 567889999999999999886 68999999997542 23346688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
|++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 114 ~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 114 AKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred CCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999994 345789999999999999999999998 99999999999999999999999999998765432
Q ss_pred -cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 -SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 -~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+ +... +..+.+ .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----~~~~----i~~~~~------~ 252 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL----IFAK----IIKLEY------D 252 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHTCC------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHH----HHcCCC------C
Confidence 233456689999999999999999999999999999999999999997655222 2111 111211 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....+ .++.+++.+|++.||++|||++|+..+
T Consensus 253 ~p~~~s----~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 253 FPEKFF----PKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCTTCC----HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCcccC----HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111222 357899999999999999999987543
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-47 Score=407.87 Aligned_cols=245 Identities=23% Similarity=0.408 Sum_probs=190.0
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.|.+.+.||+|+||+||+|+.+ +|+.||||++.... ......+.+|+++|++++||||+++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3567789999999999999876 68999999997543 2234568999999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+ +|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+...+.
T Consensus 94 y~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 94 YA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp CC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred CC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99 689999884 345799999999999999999999998 9999999999999999999999999999865432
Q ss_pred CcceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......+||+.|||||++.+..+ +.++||||+||++|||++|+.||.+.+..+ +.+ .+..+..
T Consensus 166 --~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~----~~~----~i~~~~~------ 229 (275)
T 3hyh_A 166 --NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFK----NISNGVY------ 229 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH----HHHHTCC------
T ss_pred --CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH----HHH----HHHcCCC------
Confidence 22344679999999999998876 579999999999999999999997654221 111 1112211
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+....+ ..+.+++.+|++.||++|||++|+++|
T Consensus 230 ~~p~~~s----~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 TLPKFLS----PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCCC----HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1111222 357789999999999999999999885
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.7e-48 Score=414.64 Aligned_cols=246 Identities=26% Similarity=0.343 Sum_probs=194.8
Q ss_pred HHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
|.+.+.||+|+||+||+|+.. .++.||||+++... ......+.+|+++|++++|||||++++++.+++..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 556789999999999999863 46889999997543 223456888999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
|||++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 106 Ey~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 106 DFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp CCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 9999999999995 345789999999999999999999998 999999999999999999999999999986543
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.. ......+||+.|||||++.+..++.++||||+||++|||++|+.||.+.+..+ +... +..+..
T Consensus 179 ~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~~----i~~~~~------ 243 (304)
T 3ubd_A 179 HE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----TMTM----ILKAKL------ 243 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHCCC------
T ss_pred CC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----HHHH----HHcCCC------
Confidence 32 22344679999999999999999999999999999999999999998655222 1111 111111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
.+.... ...+.+++.+|++.||++||| ++|+++|
T Consensus 244 ~~p~~~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 GMPQFL----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp CCCTTS----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CCCCcC----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 111112 235789999999999999998 4677664
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-45 Score=397.67 Aligned_cols=249 Identities=24% Similarity=0.328 Sum_probs=186.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecC----------
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG---------- 595 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---------- 595 (854)
|.+.+.||+|+||+||+|+.+ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++...+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 445689999999999999986 689999999975433 33467889999999999999999999987654
Q ss_pred --eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 596 --RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 596 --~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
..++|||||++|+|.+++.... .....++..++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 3689999999999999996432 222345666888999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCcc-----------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccch
Q 003046 674 GLSKFAVDGASH-----------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 742 (854)
Q Consensus 674 Gla~~~~~~~~~-----------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l 742 (854)
|+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||.... ..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------~~ 233 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ER 233 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------HH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------HH
Confidence 999866443211 1233569999999999999999999999999999999996 775322 01
Q ss_pred HHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... .......... ........+.+++.+|++.||++|||+.|+++|
T Consensus 234 ~~~~-~~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTL-TDVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHH-HHHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHH-HHHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111 1111111111 011222346789999999999999999999875
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.7e-43 Score=386.01 Aligned_cols=274 Identities=42% Similarity=0.744 Sum_probs=240.1
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.+.+.||+|+||.||+|++++++.||||++........+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 121 (321)
T 2qkw_B 42 DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121 (321)
T ss_dssp SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCB
T ss_pred CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc
Confidence 34678999999999999988899999999876665666789999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC-Cccee
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG-ASHVS 687 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~-~~~~~ 687 (854)
|.+++.........+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 122 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp TGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 9999976544445689999999999999999999998 9999999999999999999999999999764432 22223
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||.... +.....+..|.......+.+...+++.+....
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS-SSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC-cHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 44568999999999999999999999999999999999999997655 33344677777777777888888898888888
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+....+.+++.+|++.+|++|||+.||+++|+.++..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 888999999999999999999999999999999988653
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-43 Score=389.68 Aligned_cols=288 Identities=35% Similarity=0.657 Sum_probs=248.8
Q ss_pred cccCHHHHHHHHH--HhhccccccCcEEEEEEEECCCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeee
Q 003046 516 HCFTLSDIEDATK--MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 516 ~~~~~~~i~~~~~--~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~ 592 (854)
..++..++..... .+.+.||+|+||.||+|+.++++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 3466666665544 34688999999999999988899999999876532 23446899999999999999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEE
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~D 672 (854)
..+..++||||+++|+|.+++.........+++..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999977655566799999999999999999999998777999999999999999999999999
Q ss_pred ecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc-cccccchHHHHHHhhh
Q 003046 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-GANCRNIVQWAKLHIE 751 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~-~~~~~~l~~~~~~~~~ 751 (854)
||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 999987665555555566799999999999999999999999999999999999999975432 2334467788888888
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
...+..+.+..+......+....+.+++.+|++.+|++|||+.||+++|+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 8888888998888888999999999999999999999999999999999864
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=394.95 Aligned_cols=263 Identities=20% Similarity=0.289 Sum_probs=198.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee------cCeEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~------~~~~~ 598 (854)
|.+.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+..+
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 556789999999999999986 69999999997543 2234567899999999999999999998754 36789
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+|||||+ |+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 136 ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 136 VVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 9999996 67998884 346799999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCC---cceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 679 AVDGA---SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 679 ~~~~~---~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+....+....... ....
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p-~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP-SPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCC-CGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC-ChHH
Confidence 54321 2233456799999999998875 56899999999999999999999998655222221221110000 0000
Q ss_pred cccccC-------Cccc--CcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIID-------PSLL--DEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id-------~~l~--~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+-. ..+. ...+. .....+.+|+.+|++.||++|||+.|+++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000 0000 00000 112357899999999999999999999886
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-42 Score=408.78 Aligned_cols=250 Identities=23% Similarity=0.361 Sum_probs=206.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
|.+.+.||+|+||+||+|+.+ +|+.||||++..........+.+|+++|+.++||||+++++++.+++..++|||||++
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g 238 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence 456789999999999999986 6899999999876655567789999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC--CcEEEEEecccccccCCCc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH--MRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~--~~~kL~DFGla~~~~~~~~ 684 (854)
|+|.++|.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 239 g~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 239 GELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 999999853 245689999999999999999999998 99999999999999854 89999999999876543
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ +... +..+.. .++....
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~----~~~~----i~~~~~--~~~~~~~ 380 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE----TLRN----VKSCDW--NMDDSAF 380 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHH----HHTTCC--CCCSGGG
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHH----HHhCCC--CCCcccc
Confidence 23344579999999999999999999999999999999999999998655221 1111 111111 0111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ..+.+|+.+||+.||++|||+.|+++|
T Consensus 381 ~~~s----~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 SGIS----EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2222 347789999999999999999999986
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.8e-42 Score=383.09 Aligned_cols=194 Identities=25% Similarity=0.376 Sum_probs=165.6
Q ss_pred HHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
|.+.++||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|+.+ +||||+++++++.+.++.++|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 456789999999999999764 46789999986543 345678899999998 69999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEecccccccC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVD 681 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~~~ 681 (854)
|+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 101 ~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 101 YLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp CCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred CCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 999999999883 378889999999999999999998 99999999999999877 7999999999975543
Q ss_pred CCc---------------------------ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccc
Q 003046 682 GAS---------------------------HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 682 ~~~---------------------------~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~ 733 (854)
... ......+||+.|||||++.+. .++.++||||+||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 221 112335699999999999875 5899999999999999999999999543
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.5e-42 Score=401.01 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=196.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHH---HHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTN---EVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~---E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.||+|+||+||+|+.+ +|+.||||++.+... .....+.+ ++.+++.++|||||++++++.+.+..++||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVm 271 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEE
Confidence 34678999999999999987 689999999975421 12222333 466777889999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
|||+||+|.++|. ....+++..+..++.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+....
T Consensus 272 Ey~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 272 DLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999995 345789999999999999999999998 999999999999999999999999999987644
Q ss_pred CCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.. ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||.+...... ..+... . .....
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~---i-~~~~~----- 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRM---T-LTMAV----- 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHH---H-HHCCC-----
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHh---h-cCCCC-----
Confidence 32 334679999999999975 5799999999999999999999999976542211 112111 1 11111
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
.+....+ ..+.+|+.+|++.||++|++ +.||.+|
T Consensus 412 -~~p~~~S----~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 -ELPDSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -CCCTTSC----HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -CCCccCC----HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1111222 35789999999999999998 7888876
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=364.80 Aligned_cols=256 Identities=25% Similarity=0.395 Sum_probs=208.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||+||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 91 (310)
T 3s95_A 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91 (310)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCC
Confidence 345789999999999999986 5899999998766666677899999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 92 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 92 GTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999642 45689999999999999999999998 99999999999999999999999999998654332211
Q ss_pred -------------eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc--ccchHHHHHHhhh
Q 003046 687 -------------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN--CRNIVQWAKLHIE 751 (854)
Q Consensus 687 -------------~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~--~~~l~~~~~~~~~ 751 (854)
.....||+.|+|||.+.+..++.++|||||||++|||++|..|+........ ...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-- 243 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY-- 243 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--
Confidence 1145699999999999999999999999999999999999999865432111 11111111111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.... ....+.+++.+|++.+|++|||+.||++.|+.+...
T Consensus 244 -----------~~~~----~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 -----------CPPN----CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp -----------CCTT----CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------CCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0011 123478899999999999999999999999988654
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.2e-40 Score=361.27 Aligned_cols=258 Identities=31% Similarity=0.486 Sum_probs=200.2
Q ss_pred HHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.+.||+|+||+||+|+.. ++.||||++..... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 38 ~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 116 (309)
T 3p86_A 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYL 116 (309)
T ss_dssp GEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECC
T ss_pred HceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecC
Confidence 3456789999999999999885 88999999875532 23457889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
++|+|.+++... .....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 117 ~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 117 SRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp TTCBHHHHHHST-THHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCcHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 999999999643 1233588999999999999999999998 7 999999999999999999999999999754332
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ............. .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~----~~~~~~~~~~~~~--------~ 259 (309)
T 3p86_A 193 F-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAVGFKCKRL--------E 259 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHHHHSCCCC--------C
T ss_pred c-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCCC--------C
Confidence 1 2233456999999999999999999999999999999999999999765421 1222111111100 1
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+... ....+.+++.+|++.+|++|||+.||++.|+.++..
T Consensus 260 ~~~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 260 IPRN----LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1112 223578999999999999999999999999998754
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.1e-40 Score=359.29 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=204.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
|.+.+.||+|+||+||+|... +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 101 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence 345678999999999999864 6899999999866655667789999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 102 ~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 102 GSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 999999853 3588899999999999999999998 999999999999999999999999999976544332 2
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .+ ......+.. ...
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~----~~~~~~~~~-~~~------- 237 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---AL----YLIATNGTP-ELQ------- 237 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH----HHHHHHCSC-CCS-------
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HH----HHHHhCCCC-CCC-------
Confidence 334569999999999999999999999999999999999999997644111 11 111111110 000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+......+.+++.+|++.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011122457899999999999999999999986
No 25
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2e-39 Score=352.58 Aligned_cols=281 Identities=35% Similarity=0.585 Sum_probs=226.8
Q ss_pred ccccCHHHHHHHHHHhh--------ccccccCcEEEEEEEECCCcEEEEEEEecCC----ccchhchHHHHHHhhhcCCC
Q 003046 515 AHCFTLSDIEDATKMLE--------KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHR 582 (854)
Q Consensus 515 ~~~~~~~~i~~~~~~~~--------~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~Hp 582 (854)
.+.|++.++...+..+. +.||+|+||.||+|.. +++.||||++.... ......+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 35678889998887774 5699999999999987 48899999987532 22346788999999999999
Q ss_pred ceeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE
Q 003046 583 NLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 662 (854)
Q Consensus 583 nIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl 662 (854)
||+++++++...+..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999998643 2345689999999999999999999998 99999999999999
Q ss_pred cCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccc
Q 003046 663 DKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 741 (854)
Q Consensus 663 ~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~ 741 (854)
+.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||++|||++|+.||...........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 99999999999999865443222 2334569999999998765 588999999999999999999999987653333222
Q ss_pred hHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
+..... .....+.+.+++.+ ..........+.+++.+|++.+|++||++.||+++|+++.
T Consensus 246 ~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 246 IKEEIE--DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHH--TTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHhh--hhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 222111 11222344455444 3345667788999999999999999999999999999864
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=370.72 Aligned_cols=259 Identities=26% Similarity=0.454 Sum_probs=207.5
Q ss_pred HHHHHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
...+.+.+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 344556789999999999999985 34569999997643 3345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999999853 235689999999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCcc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
...... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+... +..+..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~----~~~~~~- 272 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----DVISS----VEEGYR- 272 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH----HHHHH----HHTTCC-
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH----HHHHH----HHcCCC-
Confidence 543222 2233346788999999999999999999999999999999 99999765421 12221 111110
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
...+......+.+++.+|++.+|++||++.||++.|+.++..
T Consensus 273 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 273 --------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred --------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 011112234688999999999999999999999999998653
No 27
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=368.25 Aligned_cols=247 Identities=21% Similarity=0.336 Sum_probs=194.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||+||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~ 91 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCP 91 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 445789999999999999875 789999999976532 334568899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.........
T Consensus 92 gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 92 GGELFDYII----SQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp TCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 999999984 345689999999999999999999998 9999999999999999999999999999765544444
Q ss_pred eeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .+.. . +..+... +.
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----~~~~---~-i~~~~~~------~p 230 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM----ALYK---K-IMRGKYD------VP 230 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH---H-HHHTCCC------CC
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHH---H-HHcCCCC------CC
Confidence 4455679999999999998775 88999999999999999999999765421 1111 1 1112110 11
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...+.+++.+|++.||++|||+.|+++|
T Consensus 231 ~~~----s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 KWL----SPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCC----CHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 112 2346789999999999999999999986
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.6e-40 Score=371.76 Aligned_cols=260 Identities=23% Similarity=0.432 Sum_probs=209.7
Q ss_pred HHhhccccccCcEEEEEEEEC--------CCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~ 597 (854)
+.+.+.||+|+||.||+|++. ++..||||+++.... .....+.+|+++++++ +||||++++++|...+..
T Consensus 83 ~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~ 162 (370)
T 2psq_A 83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 162 (370)
T ss_dssp EEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSC
T ss_pred CEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCE
Confidence 446789999999999999863 356799999975532 2345788999999999 899999999999999999
Q ss_pred EEEEEecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC
Q 003046 598 VLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.+
T Consensus 163 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 239 (370)
T ss_dssp EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTT
T ss_pred EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCC
Confidence 999999999999999965321 234588999999999999999999998 99999999999999999
Q ss_pred CcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchH
Q 003046 666 MRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIV 743 (854)
Q Consensus 666 ~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~ 743 (854)
+.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----~~~ 315 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----ELF 315 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHH
Confidence 99999999999865443221 2233457889999999999999999999999999999999 99999765422 222
Q ss_pred HHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 744 QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
... ..+... ..+......+.+++.+|++.+|++||++.||+++|+.++...
T Consensus 316 ~~~----~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 316 KLL----KEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHH----HTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHH----hcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 221 111110 111122345889999999999999999999999999987643
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.4e-40 Score=354.25 Aligned_cols=255 Identities=29% Similarity=0.472 Sum_probs=209.9
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|+++++..||||++..... ...++.+|++++++++||||+++++++...+..++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG 88 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCC
Confidence 446789999999999999999888999999975433 3567899999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 89 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 89 CLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp BHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred cHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999532 34589999999999999999999998 999999999999999999999999999987655444444
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... ....+. ....+. .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~----~~~~~~--~~~~~~---~ 229 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS----EVVL----KVSQGH--RLYRPH---L 229 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHH----HHHTTC--CCCCCT---T
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH----HHHH----HHHcCC--CCCCCC---c
Confidence 44557788999999999899999999999999999999 99999755421 1111 111111 001111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
....+.+++..|++.+|++|||+.||+++|+.+...
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 ----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ----SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ----ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 123578999999999999999999999999987544
No 30
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-40 Score=355.33 Aligned_cols=254 Identities=28% Similarity=0.489 Sum_probs=209.0
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|.+.+++.||||++.... ...+++.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence 44568999999999999999889999999997543 33567899999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 91 ~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 91 CLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp BHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 99999853 234688999999999999999999998 999999999999999999999999999986544332333
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|+.|+|||.+.+..++.++||||+||++|||++ |+.||...... .+... +..+. ....+ ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~----~~~~~----~~~~~--~~~~~---~~ 231 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVED----ISTGF--RLYKP---RL 231 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----HHTTC--CCCCC---TT
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH----HHHHH----HhcCc--cCCCC---Cc
Confidence 34457889999999999999999999999999999999 99999765421 11111 11110 00111 11
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....+.+++.+|++.+|++||++.|++++|+++..
T Consensus 232 ----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 232 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 12357899999999999999999999999998764
No 31
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.7e-39 Score=354.54 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=211.3
Q ss_pred cccCHHHHHHHHHH------------hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCC
Q 003046 516 HCFTLSDIEDATKM------------LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR 582 (854)
Q Consensus 516 ~~~~~~~i~~~~~~------------~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hp 582 (854)
..++..++..++.. ..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777776653 2457999999999999987 6999999999876666667789999999999999
Q ss_pred ceeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE
Q 003046 583 NLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 662 (854)
Q Consensus 583 nIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl 662 (854)
||+++++++...+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999884 24589999999999999999999998 99999999999999
Q ss_pred cCCCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccch
Q 003046 663 DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 742 (854)
Q Consensus 663 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l 742 (854)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----~~ 249 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----QA 249 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HH
T ss_pred CCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HH
Confidence 9999999999999976544322 223456999999999999999999999999999999999999999754411 11
Q ss_pred HHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... +..... +.+.. .......+.+++.+|++.+|++|||+.|++++
T Consensus 250 ~~~----~~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKR----LRDSPP-----PKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHH----HHHSSC-----CCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHH----HhcCCC-----CCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 111111 11110 01112357889999999999999999999986
No 32
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.7e-41 Score=374.59 Aligned_cols=257 Identities=25% Similarity=0.442 Sum_probs=197.1
Q ss_pred HHHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 3456789999999999999875 46789999997543 334567999999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 126 e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 126 EYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp ECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred eCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999963 244689999999999999999999998 999999999999999999999999999986644
Q ss_pred CCcce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 682 GASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 682 ~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
..... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+ ..+.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~----~~~~~i----~~~~---- 267 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV----DEGY---- 267 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH----HHHHHH----HTTE----
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCC----
Confidence 32221 122335788999999999999999999999999999998 99999765421 122211 1110
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
....+......+.+++.+|++.+|++||+|.||++.|+.++..
T Consensus 268 -----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 -----RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0111112334688999999999999999999999999998653
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.5e-40 Score=355.38 Aligned_cols=256 Identities=29% Similarity=0.473 Sum_probs=207.1
Q ss_pred HHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.+.||+|+||.||+|++.++..||||++..... ..+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 103 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence 3456789999999999999999888999999975533 356789999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 104 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 104 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred CcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999642 35689999999999999999999998 99999999999999999999999999998654432222
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... .+..+. ......
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~----~~~----~~~~~~-----~~~~~~ 244 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAE----HIAQGL-----RLYRPH 244 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHH----HHHTTC-----CCCCCT
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH----HHH----HHhccc-----CCCCCC
Confidence 333457888999999999999999999999999999998 999997654211 111 111110 000011
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
. ....+.+++.+|++.+|++|||+.|++++|++++..
T Consensus 245 ~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 245 L----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp T----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1 123588999999999999999999999999998753
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.3e-40 Score=361.91 Aligned_cols=266 Identities=27% Similarity=0.351 Sum_probs=205.5
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecC----eEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~~~lV~e~ 603 (854)
+.+.+.||+|+||+||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ..++||||
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 26 LQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred chhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 445789999999999999987 7999999996543 23445667999999999999999999998754 36999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-------CCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-------VPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 104 ~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 104 HEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp CTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999953 35899999999999999999999852 238999999999999999999999999999
Q ss_pred ccccCCCcc-eeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCccccccccccccc---------c
Q 003046 677 KFAVDGASH-VSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR---------N 741 (854)
Q Consensus 677 ~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~---------~ 741 (854)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 765543322 2233569999999999986 456678999999999999999999997643211100 1
Q ss_pred hHHHHHHhhhcCCcccccCCcccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 742 IVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+...... .. ..+.+... ........+.+++.+|++.||++|||+.||++.|+++..
T Consensus 259 ~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVVH-KK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHTT-SC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhc-cc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111 11 11111111 122455679999999999999999999999999998754
No 35
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-40 Score=371.28 Aligned_cols=255 Identities=29% Similarity=0.431 Sum_probs=206.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|++. +++.||||+++... ......+.+|+++|++++||||+++++++...+..++||||++
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 195 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 195 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence 345789999999999999987 68999999987543 2334678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 196 ~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 196 GGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp TCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999999953 244688999999999999999999998 9999999999999999999999999999864332111
Q ss_pred ee-ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 686 VS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 686 ~~-~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.. ....+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.. .+..+...
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~~~~----~~~~~~~~------- 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----QTRE----FVEKGGRL------- 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----HHHH----HHHTTCCC-------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH----HHHcCCCC-------
Confidence 11 12235778999999999999999999999999999998 99999765421 1112 12222110
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+......+.+++.+|++.+|++|||+.+|++.|+.+..
T Consensus 335 --~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 --PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 0111123457899999999999999999999999998754
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.4e-40 Score=361.81 Aligned_cols=245 Identities=24% Similarity=0.402 Sum_probs=201.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 445689999999999999984 79999999997542 233456889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 97 SGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp TTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 99999999843 35688999999999999999999998 99999999999999999999999999997654332
Q ss_pred ceeecccccccccCccccccCcCC-CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||.+.... .+.. .+..+... +
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~----~i~~~~~~------~ 233 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK----ELRE----RVLRGKYR------I 233 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCC------C
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH----HHHH----HHHhCCCC------C
Confidence 23445799999999999988775 7899999999999999999999865421 1111 11112110 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.||++|||+.|+++|
T Consensus 234 p~~----~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 PFY----MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CTT----SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCC----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111 12357789999999999999999999886
No 37
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=349.41 Aligned_cols=271 Identities=21% Similarity=0.285 Sum_probs=211.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecC--eEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--~~~lV~e~ 603 (854)
|.+.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 445789999999999999987 48999999997543 233566789999999999999999999997765 78999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE----cCCCcEEEEEecccccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~~kL~DFGla~~~ 679 (854)
+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999996432 223489999999999999999999998 99999999999999 78888999999999866
Q ss_pred cCCCcceeecccccccccCccccc--------cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYI--------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
..... .....||+.|+|||++. +..++.++|||||||++|||++|+.||...........+.........
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 44322 23356999999999986 577899999999999999999999999754433322222222221111
Q ss_pred cCCccccc---------CCc--ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 752 SGDIQGII---------DPS--LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 752 ~~~~~~~i---------d~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
...+..+. ++. ............+.+++.+|++.||++|||++|++++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11111100 001 112345667778999999999999999999999999998754
No 38
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.5e-40 Score=359.37 Aligned_cols=264 Identities=27% Similarity=0.397 Sum_probs=204.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-----CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-----~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~l 599 (854)
.+.+.+.||+|+||+||+|++. +++.||||++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 3456789999999999999852 588999999986665556789999999999999999999999854 356899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 91 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999543 34588999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCcc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc--------ccccchHHHHHHh
Q 003046 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG--------ANCRNIVQWAKLH 749 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~--------~~~~~l~~~~~~~ 749 (854)
...... ......+|..|+|||.+.+..++.++|||||||++|||++|..|+...... .............
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 443221 223345788899999999999999999999999999999999988643210 0000111111122
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+.. ...+......+.+++.+|++.+|++|||+.||++.|+++..
T Consensus 245 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 245 LKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 221111 11112223468899999999999999999999999998754
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.6e-40 Score=354.28 Aligned_cols=258 Identities=24% Similarity=0.376 Sum_probs=202.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 92 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEY 92 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeC
Confidence 456789999999999999876 688999999865432 2245688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 93 ~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 93 IEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 999999999843 34689999999999999999999998 99999999999999999999999999998665443
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .......... ... .
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~-~~~-----~ 232 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDS-VPN-----V 232 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHSSC-CCC-----H
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhhcc-CCC-----c
Confidence 33344556999999999999999999999999999999999999999765411 1111111111 100 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIV 805 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~~~~ 805 (854)
...........+.+++.+|++.+|++|| ++.++.+.|+.++.
T Consensus 233 ~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 233 TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0111112234688999999999999999 89999999987643
No 40
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.7e-39 Score=361.76 Aligned_cols=249 Identities=24% Similarity=0.353 Sum_probs=202.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
|.+.+.||+|+||.||+|+.+ +|+.||||++...... ....+.+|+.+|++++||||+++++++...+..++|
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence 456789999999999999987 6899999999765322 235688999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC----cEEEEEeccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFGLS 676 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~~kL~DFGla 676 (854)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 94 ~e~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 94 LELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EECCCSCBHHHHHT----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999984 345689999999999999999999998 999999999999998877 7999999999
Q ss_pred ccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 677 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....+ +... +..+..
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~----~~~~----i~~~~~- 235 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLAN----ITAVSY- 235 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHH----HHTTCC-
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHHH----HHhcCC-
Confidence 8654432 2234569999999999999999999999999999999999999997654211 1111 111111
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+++...... ...+.+++.+|+..||++|||+.|+++|
T Consensus 236 -~~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 236 -DFDEEFFSQT----SELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -CCCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CCCchhccCC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111111111 2357899999999999999999999976
No 41
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.2e-39 Score=357.53 Aligned_cols=245 Identities=23% Similarity=0.325 Sum_probs=201.4
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|+.+ +++.||||+++... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~ 87 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 45688999999999999987 68999999997542 233456788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 88 ~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 159 (337)
T 1o6l_A 88 NGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp TTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence 9999999884 345688999999999999999999998 99999999999999999999999999997533222
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... .. .+.. .+.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~---i~-~~~~------~~p 225 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFEL---IL-MEEI------RFP 225 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH---HH-HCCC------CCC
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH----HHHHH---HH-cCCC------CCC
Confidence 2234457999999999999999999999999999999999999999764421 11111 11 1111 111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
... ...+.+++.+|++.+|++|| ++.||++|
T Consensus 226 ~~~----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCC----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112 23578999999999999999 89999887
No 42
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=355.10 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=203.5
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34667889999999999999987 5899999999754322 2456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC----cEEEEEec
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 674 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~~kL~DFG 674 (854)
+||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHT----TSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999984 345689999999999999999999998 999999999999999887 89999999
Q ss_pred ccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ...... ...
T Consensus 164 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~~~----~~~ 233 (326)
T 2y0a_A 164 LAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS----AVN 233 (326)
T ss_dssp TCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHH----HTC
T ss_pred CCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHHHHH----hcC
Confidence 998654332 2234569999999999999999999999999999999999999997644211 111111 110
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. ........ ....+.+++.+|++.||++|||+.|+++|
T Consensus 234 ~~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 YE--FEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CC--CCHHHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CC--cCcccccc----CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00000111 12357899999999999999999999986
No 43
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.9e-39 Score=348.12 Aligned_cols=257 Identities=22% Similarity=0.363 Sum_probs=198.3
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhh--cCCCceeeEeeeeeec----CeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEE----GRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~g~~~~~----~~~~lV~ 601 (854)
+.+.+.||+|+||+||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++... ...++||
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 44578999999999999998 4899999998643 33455566666666 7999999999987543 4579999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHH--------hCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
||+++|+|.+++. ...+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 86 e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 86 HYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp CCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999994 346899999999999999999999 66 9999999999999999999999999
Q ss_pred cccccccCCCcce---eecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhC----------Cccccccc
Q 003046 674 GLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEK 734 (854)
Q Consensus 674 Gla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwS~Gvvl~elltG----------~~pf~~~~ 734 (854)
|+++......... .....||+.|+|||.+.+. .++.++|||||||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9998655443332 2234699999999999876 556799999999999999999 77775443
Q ss_pred ccccccchHHHHHHhhhcCCcccccCCccc-CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 735 FGANCRNIVQWAKLHIESGDIQGIIDPSLL-DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 735 ~~~~~~~l~~~~~~~~~~~~~~~~id~~l~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
..... ............. .+.+. ..........+.+++.+|++.||++|||+.||++.|+++
T Consensus 238 ~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPS--FEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCC--HHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcc--hhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 22111 1111111111111 11111 112334567899999999999999999999999999874
No 44
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-39 Score=355.51 Aligned_cols=260 Identities=26% Similarity=0.427 Sum_probs=209.4
Q ss_pred HHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 103 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLL 103 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEE
Confidence 3456789999999999999862 45789999997543 2334678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhccccc--------------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCC
Q 003046 600 VYEFMHNGTLKEHLYGTLT--------------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 659 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~N 659 (854)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~N 180 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARN 180 (314)
T ss_dssp EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchhe
Confidence 9999999999999965322 124588999999999999999999998 99999999999
Q ss_pred eEEcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccc
Q 003046 660 ILLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGA 737 (854)
Q Consensus 660 ILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~ 737 (854)
||++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 259 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE- 259 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 99999999999999999865443322 2233457889999999999999999999999999999999 99999765421
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+.... ..+... ..... ....+.+++.+|++.+|++||++.||+++|++++..
T Consensus 260 ---~~~~~~----~~~~~~-----~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 260 ---RLFNLL----KTGHRM-----ERPDN----CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ---GHHHHH----HTTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---HHHHHh----hcCCcC-----CCCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 222221 111110 11111 234588999999999999999999999999998653
No 45
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.1e-40 Score=366.14 Aligned_cols=262 Identities=27% Similarity=0.422 Sum_probs=207.1
Q ss_pred HHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeeecCe-
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR- 596 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~- 596 (854)
..+.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|++++.++ +||||+++++++...+.
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 34556789999999999999742 467899999976432 3346789999999999 79999999999987554
Q ss_pred EEEEEEecCCCCHHHhhcccccc---------------------------------------------------------
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTH--------------------------------------------------------- 619 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~--------------------------------------------------------- 619 (854)
.++||||+++|+|.+++......
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 89999999999999999654211
Q ss_pred -----cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc-ceeeccccc
Q 003046 620 -----EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGT 693 (854)
Q Consensus 620 -----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt 693 (854)
...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .......||
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 258 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence 12288999999999999999999998 999999999999999999999999999986543322 233445689
Q ss_pred ccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHH
Q 003046 694 VGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSM 772 (854)
Q Consensus 694 ~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~ 772 (854)
+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .+.. .+..+.... .... ..
T Consensus 259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----~~~~~~~~~-----~~~~----~~ 322 (359)
T 3vhe_A 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFCR----RLKEGTRMR-----APDY----TT 322 (359)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HHHH----HHHHTCCCC-----CCTT----CC
T ss_pred ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH---HHHH----HHHcCCCCC-----CCCC----CC
Confidence 99999999999999999999999999999998 999997654221 1111 111111111 1111 22
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 773 WKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 773 ~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+.+++.+|++.+|++|||+.||+++|++++..
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999998753
No 46
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.9e-40 Score=376.67 Aligned_cols=253 Identities=24% Similarity=0.397 Sum_probs=206.8
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++. .+..++||||+++|
T Consensus 190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g 267 (454)
T 1qcf_A 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKG 267 (454)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred eEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCC
Confidence 44678999999999999999888999999997543 34678999999999999999999999987 56789999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 268 ~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 268 SLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp BHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred cHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 999999642 234578889999999999999999998 999999999999999999999999999986543222222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|+.|+|||.+....++.++|||||||++|||++ |+.||.+.... .+...+ ..+... .
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i----~~~~~~---------~ 405 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRAL----ERGYRM---------P 405 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHH----HHTCCC---------C
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCCC---------C
Confidence 33446789999999999999999999999999999999 99999765422 222211 111100 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+++.+|++.+|++|||+.+|++.|+.+.
T Consensus 406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 11122346889999999999999999999999999764
No 47
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=365.69 Aligned_cols=261 Identities=25% Similarity=0.433 Sum_probs=210.4
Q ss_pred HHHHhhccccccCcEEEEEEEEC--------CCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeeecC
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 595 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~ 595 (854)
..+.+.+.||+|+||.||+|+.. .+..||||+++.... .....+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 34556789999999999999863 235799999976532 3346788999999999 9999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~ 663 (854)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEc
Confidence 99999999999999999965321 124589999999999999999999998 999999999999999
Q ss_pred CCCcEEEEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccc
Q 003046 664 KHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 741 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~ 741 (854)
.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~----~ 301 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----E 301 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----H
Confidence 999999999999986544322 22333457899999999999999999999999999999999 99999765421 2
Q ss_pred hHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+... +..+.... .... ....+.+++.+|++.+|++||++.||+++|++++..
T Consensus 302 ~~~~----~~~~~~~~-----~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 302 LFKL----LKEGHRMD-----KPSN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp HHHH----HHTTCCCC-----CCSS----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHH----HHcCCCCC-----CCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 2221 12221111 1111 234588999999999999999999999999998754
No 48
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.8e-39 Score=352.81 Aligned_cols=263 Identities=21% Similarity=0.265 Sum_probs=198.7
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||+||+|+..+++.||||++..... .....+.+|++++++++||||+++++++..++..++||||++
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 102 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC
Confidence 445689999999999999998899999999975432 224568899999999999999999999999999999999998
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+ +|.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 103 ~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 103 K-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp E-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred C-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 5 78877753 234588999999999999999999998 999999999999999999999999999986543322
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc-------
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG------- 757 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~------- 757 (854)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+........ ......
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~ 253 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN-PREWPQVQELPLW 253 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCC-TTTSGGGTTSHHH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCC-hHHhhhhhccchh
Confidence 2233468999999999876 5689999999999999999999999976553322222221110000 000000
Q ss_pred ------ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 ------IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ------~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.............++.+++.+|++.||++|||+.|+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000001122457899999999999999999999875
No 49
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.1e-39 Score=359.94 Aligned_cols=256 Identities=21% Similarity=0.303 Sum_probs=204.9
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-----ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
...|.+.+.||+|+||.||+|..+ +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 345677899999999999999876 68999999986431 123567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc---EEEEEecc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGL 675 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---~kL~DFGl 675 (854)
+||||+++|+|.+.+.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865433344688999999999999999999998 9999999999999987654 99999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+... +..+..
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~----i~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-----ERLFEG----IIKGKY 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-----HHHHHH----HHHTCC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-----HHHHHH----HHcCCC
Confidence 98654432 22334569999999999999999999999999999999999999997643 111111 111111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .++...... ...+.+++.+|++.||++||++.|+++|
T Consensus 250 ~--~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 011111111 2457899999999999999999999875
No 50
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.5e-39 Score=349.29 Aligned_cols=257 Identities=21% Similarity=0.343 Sum_probs=195.3
Q ss_pred HHHhhccccccCcEEEEEEEECC----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
.+.+.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 94 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM 94 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEE
Confidence 44567899999999999998753 4569999986543 233567889999999999999999999985 45689999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 95 ELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp ECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999998532 34588999999999999999999998 999999999999999999999999999986654
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
..........+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.... ..+...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~~~i----~~~~~~---- 236 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRI----ENGERL---- 236 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHH----HTTCCC----
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHHHHH----HcCCCC----
Confidence 43333344457889999999998999999999999999999997 99999765422 222221 111110
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.+... ....+.+++.+|++.+|++||++.||+++|+.++..+
T Consensus 237 -~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 -PMPPN----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp -CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01111 2345789999999999999999999999999987644
No 51
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-39 Score=377.93 Aligned_cols=254 Identities=28% Similarity=0.427 Sum_probs=209.8
Q ss_pred HHhhccccccCcEEEEEEEECC-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|+++. +..||||+++... ...+.|.+|+++|++++||||++++++|...+..++||||+++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~ 300 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence 4467899999999999999874 8899999997543 3457799999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 301 g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 301 GNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp CBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 9999999642 234588999999999999999999998 99999999999999999999999999998765433333
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.+.+ ..+. ..
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~~----~~~~---------~~ 438 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELL----EKDY---------RM 438 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHH----HTTC---------CC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCC---------CC
Confidence 333456789999999999999999999999999999999 99999765422 222221 1111 11
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
..+......+.+++.+|++.+|++||++.||++.|+.+.
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111122346889999999999999999999999999875
No 52
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.9e-39 Score=356.64 Aligned_cols=255 Identities=23% Similarity=0.370 Sum_probs=198.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCc----EEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
+.+.+.||+|+||+||+|++. +++ +||+|.+.... ....+.+.+|+.++++++||||++++++|.... .++|+
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEE
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEE
Confidence 445789999999999999875 344 35888775432 344567999999999999999999999998764 78999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 96 QLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp ECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999998642 45688999999999999999999998 999999999999999999999999999986644
Q ss_pred CCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+..... .+..
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~----~~~~---- 237 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILE----KGER---- 237 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH----TTCC----
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----HHHHHHH----cCCC----
Confidence 3322 2233457889999999999999999999999999999999 99999765422 2222111 1110
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
...+......+.+++.+|++.+|++||+|.||+++|+.+...
T Consensus 238 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 -----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 011112234588999999999999999999999999987653
No 53
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.9e-40 Score=365.64 Aligned_cols=261 Identities=26% Similarity=0.405 Sum_probs=207.4
Q ss_pred HHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecC-CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.+.||+|+||+||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++...+..++
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 3456789999999999999854 4668999998654 23345578899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccc---cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC---cEEEEEe
Q 003046 600 VYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDF 673 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~~kL~DF 673 (854)
||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCC
Confidence 999999999999996532 2234689999999999999999999998 999999999999999555 5999999
Q ss_pred cccccccCC-CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003046 674 GLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++..... .........||+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+... +.
T Consensus 229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~----~~~~~----i~ 300 (367)
T 3l9p_A 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEF----VT 300 (367)
T ss_dssp HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHH----HH
T ss_pred ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HH
Confidence 999754221 1122233458999999999999999999999999999999998 99999765421 22221 11
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.+... ..+......+.+++.+|++.+|++||++.||+++|+.+....
T Consensus 301 ~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 301 SGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp TTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred cCCCC---------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11110 011112235789999999999999999999999999876543
No 54
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.1e-39 Score=352.37 Aligned_cols=259 Identities=18% Similarity=0.223 Sum_probs=206.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 345688999999999999874 68999999987543 345789999999999 9999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc-----EEEEEeccccccc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAV 680 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~-----~kL~DFGla~~~~ 680 (854)
+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 88 ~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999998532 45789999999999999999999998 9999999999999998887 9999999998654
Q ss_pred CCCcc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 681 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 681 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+......... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-~~ 240 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA-TP 240 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH-SC
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc-CC
Confidence 43321 123457999999999999999999999999999999999999999875422221111111111110 00
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
. + .+... .. .+.+++..|++.+|.+||++.+|.+.|+++...
T Consensus 241 ~-~----~~~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 241 I-E----VLCEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp H-H----HHTTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H-H----HHhcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0 0 00011 11 688999999999999999999999999987653
No 55
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.1e-39 Score=354.61 Aligned_cols=255 Identities=24% Similarity=0.414 Sum_probs=200.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcE----EEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~----vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
+.+.+.||+|+||.||+|++. +++. ||+|++.... ......+.+|+.++++++||||+++++++. .+..++||
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~ 93 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVT 93 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEE
Confidence 345688999999999999876 3443 7888875443 334467889999999999999999999986 45689999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 94 QYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp ECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999998532 45688999999999999999999998 999999999999999999999999999987654
Q ss_pred CCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~----~~~~~~~~-- 237 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPDL----LEKGERLA-- 237 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHHH----HHTTCBCC--
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHHH----HHcCCCCC--
Confidence 4322 2344568889999999999999999999999999999999 99999765422 12221 11111100
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+. .....+.+++.+|++.+|++||++.||+++|+.+...
T Consensus 238 ~~~-------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 238 QPQ-------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CCT-------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCC-------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 000 1112467899999999999999999999999988643
No 56
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.4e-39 Score=355.35 Aligned_cols=250 Identities=22% Similarity=0.381 Sum_probs=199.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 345689999999999999887 78999999987543 2334678999999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC-c
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-S 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~-~ 684 (854)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 89 ~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 89 GGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999884 345689999999999999999999998 99999999999999999999999999997654322 2
Q ss_pred ceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ......|... ... ..+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~----~~~---~~~-- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKEK----KTY---LNP-- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT--SHHHHHHHTT----CTT---STT--
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHhcc----ccc---CCc--
Confidence 22334579999999999988775 77899999999999999999999764421 1112222111 100 000
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~----~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKK----IDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGG----SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccc----CCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 011 22356789999999999999999999876
No 57
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1e-39 Score=358.48 Aligned_cols=266 Identities=24% Similarity=0.348 Sum_probs=208.4
Q ss_pred HHHhhccccccCcEEEEEEEE-----CCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeee--ecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~--~~~~~~l 599 (854)
.+.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 345678999999999999985 368899999998766566677999999999999999999999886 4566899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999998532 34589999999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCcc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc-------ccchHHHHHHhh
Q 003046 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-------CRNIVQWAKLHI 750 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~-------~~~l~~~~~~~~ 750 (854)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ............
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 543322 22334588899999999999999999999999999999999999865431100 000011111111
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
..+. ....+......+.+++.+|++.+|++|||+.||+++|+.+....
T Consensus 258 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 258 EEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111 11112223346889999999999999999999999999886543
No 58
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.1e-39 Score=347.19 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=196.9
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (288)
T 1ob3_A 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred hhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence 45678999999999999998899999999975432 2246688999999999999999999999999999999999985
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 85 -~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 85 -DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp -EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred -CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 898888532 35688899999999999999999998 999999999999999999999999999976543221 2
Q ss_pred eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc-----cccC
Q 003046 687 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ-----GIID 760 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~id 760 (854)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+....... ...... ...+
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP-NSKNWPNVTELPKYD 235 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC-CTTTSTTGGGSTTCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCC-Chhhchhhhcccccc
Confidence 233468999999999976 458999999999999999999999997654221111111110000 000000 0011
Q ss_pred Cccc-------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLL-------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~-------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.+. ..........+.+++.+|++.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1110 01111123457899999999999999999999875
No 59
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=353.45 Aligned_cols=249 Identities=18% Similarity=0.299 Sum_probs=202.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
|.+.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 85 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG 85 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCC
Confidence 345788999999999999987 58899999987442 3355688999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC--CCcEEEEEecccccccCCCc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~--~~~~kL~DFGla~~~~~~~~ 684 (854)
|+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 86 ~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 86 LDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 999999853 234688999999999999999999998 9999999999999997 7899999999998765432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|..||...... .+... . ..+... .+....
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~---i-~~~~~~--~~~~~~ 227 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ----QIIEN---I-MNAEYT--FDEEAF 227 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHH---H-HHTCCC--CCHHHH
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH----HHHHH---H-HcCCCC--CChhhh
Confidence 233456999999999999988999999999999999999999999765421 11111 1 111110 010011
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...+.+++.+|++.||++|||+.|+++|
T Consensus 228 ~~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 KEI----SIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp TTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccC----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 2457899999999999999999999986
No 60
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=360.89 Aligned_cols=246 Identities=25% Similarity=0.342 Sum_probs=197.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||||+++++++...+..++|||
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E 104 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME 104 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEe
Confidence 445789999999999999987 58999999997542 22345577899999988 79999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 105 FVNGGDLMFHIQ----KSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp CCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred CCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 999999999984 345689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +... +..+.. .
T Consensus 178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~----i~~~~~------~ 242 (353)
T 3txo_A 178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD----LFEA----ILNDEV------V 242 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHCCC------C
T ss_pred -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----HHHH----HHcCCC------C
Confidence 223344579999999999999999999999999999999999999997655221 1111 111111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm------~eV~~~ 799 (854)
+... ....+.+++.+|++.+|++||++ .|+++|
T Consensus 243 ~p~~----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 243 YPTW----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp CCTT----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred CCCC----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0111 22357889999999999999998 778775
No 61
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-39 Score=355.36 Aligned_cols=264 Identities=25% Similarity=0.381 Sum_probs=206.4
Q ss_pred HHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~ 597 (854)
..+.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.+++++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 34556789999999999999862 45689999997542 33456789999999999 899999999999999999
Q ss_pred EEEEEecCCCCHHHhhcccccc-------------------cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCC
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTH-------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 658 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~ 658 (854)
++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~ 201 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAAR 201 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGG
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChh
Confidence 9999999999999999643211 13478999999999999999999998 9999999999
Q ss_pred CeEEcCCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCccccccccc
Q 003046 659 NILLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 736 (854)
Q Consensus 659 NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~ 736 (854)
|||++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 999999999999999999865443322 2334557889999999999999999999999999999998 99999765422
Q ss_pred ccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 003046 737 ANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 808 (854)
Q Consensus 737 ~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~ 808 (854)
. .+.. ....+.. . ..+......+.+++.+|++.+|++||++.||+++|+.++...+
T Consensus 282 ~---~~~~----~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 282 A---NFYK----LIQNGFK-----M----DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp H---HHHH----HHHTTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred H---HHHH----HHhcCCC-----C----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 1 1111 1111110 0 0111123458899999999999999999999999999866443
No 62
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.1e-39 Score=345.69 Aligned_cols=251 Identities=30% Similarity=0.429 Sum_probs=191.4
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCc----cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY----QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEEC
T ss_pred eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEc
Confidence 345689999999999999986 89999999875432 2245688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC--------CCcEEEEEecc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--------HMRAKVSDFGL 675 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~--------~~~~kL~DFGl 675 (854)
+++++|.+++. ...+++..++.++.|++.||+|||+....+|+||||||+|||++. ++.+||+|||+
T Consensus 88 ~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 88 ARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp CTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred CCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999884 346889999999999999999999983223999999999999986 77899999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .. .....
T Consensus 163 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~---~~-~~~~~ 231 (271)
T 3dtc_A 163 AREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL----AVAY---GV-AMNKL 231 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHH---HH-HTSCC
T ss_pred cccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH---hh-hcCCC
Confidence 97554322 22346899999999999999999999999999999999999999764411 1111 11 11111
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
. ...+......+.+++.+|++.+|++|||+.|++++|+.+
T Consensus 232 ~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 A--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred C--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1 111112234688999999999999999999999999853
No 63
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-39 Score=349.60 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=212.8
Q ss_pred HHHhhccccccCcEEEEEEEECC-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.+.||+|+||.||+|.+.. ++.||||++.... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 92 (288)
T 3kfa_A 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 92 (288)
T ss_dssp GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCC
Confidence 34567899999999999999874 7889999997543 345678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 93 ~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 167 (288)
T 3kfa_A 93 YGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167 (288)
T ss_dssp TEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred CCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence 99999999642 245588999999999999999999998 9999999999999999999999999999876554444
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .+...... .. .
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~~~~~~~~----~~-----~---- 230 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLEK----DY-----R---- 230 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHHT----TC-----C----
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHhc----cC-----C----
Confidence 4445567889999999999999999999999999999999 99999765422 22222111 10 0
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
...+......+.+++.+|++.+|++||++.||++.|+.+....
T Consensus 231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0111112246889999999999999999999999999987654
No 64
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.8e-39 Score=366.58 Aligned_cols=248 Identities=28% Similarity=0.437 Sum_probs=202.8
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecC-eEEEEEEecCCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-RSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~~lV~e~~~~g 607 (854)
.+.+.||+|+||.||+|.++ ++.||||+++... ..+.|.+|+++|++++||||+++++++...+ ..++||||+++|
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g 272 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272 (450)
T ss_dssp EEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred EEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence 45688999999999999987 7899999997543 4567999999999999999999999987765 789999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 273 ~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 343 (450)
T 1k9a_A 273 SLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----Q 343 (450)
T ss_dssp BHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----c
Confidence 999999643 223478889999999999999999998 9999999999999999999999999999854322 1
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+.. ..
T Consensus 344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~~----i~~~~~---------~~ 406 (450)
T 1k9a_A 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPR----VEKGYK---------MD 406 (450)
T ss_dssp ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----THHHH----HHTTCC---------CC
T ss_pred cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHcCCC---------CC
Confidence 22357899999999999999999999999999999998 99999765522 22221 112211 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+......+.+++.+|++.+|++|||+.||++.|+.+..
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 111223468899999999999999999999999998754
No 65
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=344.21 Aligned_cols=247 Identities=25% Similarity=0.351 Sum_probs=193.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--------------------------chhchHHHHHHhhhcC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------------------------GKREFTNEVTLLSRIH 580 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--------------------------~~~~~~~E~~~l~~l~ 580 (854)
|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 446789999999999999876 6889999998754311 1246889999999999
Q ss_pred CCceeeEeeeeee--cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCC
Q 003046 581 HRNLVQFLGYCQE--EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 658 (854)
Q Consensus 581 HpnIv~l~g~~~~--~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~ 658 (854)
||||+++++++.. .+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 9999999999986 568899999999999987652 34689999999999999999999998 9999999999
Q ss_pred CeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccCc---CCCcchhhhHHHHHHHHHhCCcccccccc
Q 003046 659 NILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKF 735 (854)
Q Consensus 659 NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwS~Gvvl~elltG~~pf~~~~~ 735 (854)
|||++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999986544322 233456999999999998655 47789999999999999999999976431
Q ss_pred cccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 736 GANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 736 ~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. .+.. .+....... ...... ...+.+++.+|++.||++||++.|+++|
T Consensus 246 ~----~~~~----~~~~~~~~~----~~~~~~----~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 M----CLHS----KIKSQALEF----PDQPDI----AEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp H----HHHH----HHHHCCCCC----CSSSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred H----HHHH----HHhcccCCC----CCcccc----CHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1 1111 111111110 001112 2357899999999999999999999865
No 66
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.1e-39 Score=344.76 Aligned_cols=254 Identities=28% Similarity=0.477 Sum_probs=207.8
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence 345688999999999999998889999999976543 3567899999999999999999999999999999999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 89 ~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 89 CLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp BHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999998532 34588999999999999999999998 999999999999999999999999999986543222222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... .+... +..+.. ...+ ..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~----i~~~~~--~~~~---~~ 229 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVED----ISTGFR--LYKP---RL 229 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----HHTTCC--CCCC---TT
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH----HHHHH----HhcCCc--CCCC---cc
Confidence 33457889999999998899999999999999999999 89999764421 11111 111110 0001 11
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....+.+++.+|++.+|++||++.|++++|+++..
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 230 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 12357899999999999999999999999998754
No 67
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.5e-39 Score=366.60 Aligned_cols=252 Identities=22% Similarity=0.287 Sum_probs=204.4
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.++||+|+||+||+|+++ +++.||||++.... ......+.+|+.++..++||||++++++|.+.+..++||||+
T Consensus 77 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~ 156 (437)
T 4aw2_A 77 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 156 (437)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecC
Confidence 34678999999999999987 47889999997532 222345889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 157 ~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 157 VGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999999532 45689999999999999999999998 999999999999999999999999999987655544
Q ss_pred ceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 685 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+... -.+.
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~----~~~p--- 303 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER----FQFP--- 303 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH----CCCC---
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc----ccCC---
Confidence 4455567999999999997 567899999999999999999999999865533333233222111 1111
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~ 799 (854)
......+ ..+.+++.+|+..+|++ ||+++|+++|
T Consensus 304 --~~~~~~s----~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 --TQVTDVS----ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --SSCCCSC----HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --cccccCC----HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1111122 34778999999888888 9999999987
No 68
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.2e-39 Score=345.06 Aligned_cols=256 Identities=25% Similarity=0.423 Sum_probs=208.0
Q ss_pred HHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.+.||+|+||.||+|...+++.||||++.... .....+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 91 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMEN 91 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCC
Confidence 344678999999999999999888899999997543 345678999999999999999999999874 468999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 92 ~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 92 GSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp CBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999532 233688999999999999999999998 99999999999999999999999999998765443333
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+.. .....
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~----~~~~~~-----~~~~~ 233 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQN----LERGYR-----MVRPD 233 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHH----HHTTCC-----CCCCT
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH----HHHHH----HhcccC-----CCCcc
Confidence 334457889999999998899999999999999999999 99999764421 12221 111110 00111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
. ....+.+++.+|++.+|++|||+.++++.|+++...
T Consensus 234 ~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 234 N----CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 1 224688999999999999999999999999998754
No 69
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=365.11 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=202.3
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
..|.+.+.||+|+||.||+|... +|+.+|+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 34566889999999999999876 689999999976532 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc---CCCcEEEEEecccccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~---~~~~~kL~DFGla~~~ 679 (854)
|+++|+|.+.+.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 91 ~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 91 LVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred eCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999998853 45688999999999999999999998 999999999999998 4678999999999765
Q ss_pred cCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
..... ......||+.|+|||++.+..++.++||||+||++|||++|..||...... .+... +..+... .
T Consensus 164 ~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~----~~~~~----i~~~~~~--~ 232 (444)
T 3soa_A 164 EGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH----RLYQQ----IKAGAYD--F 232 (444)
T ss_dssp CTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHH----HHHTCCC--C
T ss_pred cCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH----HHHHH----HHhCCCC--C
Confidence 44322 223456999999999999999999999999999999999999999765421 12221 1112110 0
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ ...+.+++.+|++.||++|||+.|+++|
T Consensus 233 ~~~~~~~~----s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSPEWDTV----TPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTTTTTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CccccccC----CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00111122 2357899999999999999999999986
No 70
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-38 Score=357.53 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=200.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++.... .....+..|..++.++ +||||+++++++...+..++|||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E 133 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence 345789999999999999987 578899999976532 2334578899999887 89999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 ~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 134 YVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp CCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred cCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999885 345689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc-ccchHHHHHHhhhcCCcccccCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-CRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~-~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...........+..+.+
T Consensus 207 -~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp -TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred -CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 2233456799999999999999999999999999999999999999965432111 11112222222222211
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm------~eV~~~ 799 (854)
.+... ....+.+++.+|++.||++||++ .||++|
T Consensus 280 ~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 280 RIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CCCTT----SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCCCc----CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 11111 22357899999999999999985 677665
No 71
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.6e-39 Score=365.74 Aligned_cols=248 Identities=22% Similarity=0.275 Sum_probs=201.9
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.||+|+||.||+|+.+ +++.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 4578999999999999987 58899999997532 2234568899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 153 gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 153 GGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp TEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred CCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 9999998843 3588889999999999999999998 9999999999999999999999999999876554433
Q ss_pred eeecccccccccCccccccCc----CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQ----LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+....+..+.... ....
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----~~p~---- 296 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL----TFPD---- 296 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC----CCCT----
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc----cCCC----
Confidence 445667999999999998655 7899999999999999999999998655322222222211100 0000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++ ||++.||++|
T Consensus 297 --~~~~----s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 --DNDI----SKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --TCCC----CHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --cccc----cHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0111 235788999999999988 9999999987
No 72
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=358.61 Aligned_cols=250 Identities=20% Similarity=0.330 Sum_probs=204.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
|.+.+.||+|+||.||+|... +++.||+|++..........+.+|+++|++++||||+++++++...+..++||||+++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~g 132 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 132 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCC
Confidence 556789999999999999886 6889999999766555566789999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC--CCcEEEEEecccccccCCCc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~--~~~~kL~DFGla~~~~~~~~ 684 (854)
|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 133 g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 133 GELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 999998853 234689999999999999999999998 9999999999999974 4789999999998664432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+ ..... ..++...
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~i----~~~~~--~~~~~~~ 274 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNV----KRCDW--EFDEDAF 274 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHH----HHCCC--CCCSSTT
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH----HHHHHH----HhCCC--CCCcccc
Confidence 223346999999999999999999999999999999999999999765421 111111 11111 0111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...+.+++.+|++.||++|||+.|+++|
T Consensus 275 ~~~----s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 SSV----SPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTS----CHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccC----CHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 222 2357899999999999999999999986
No 73
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3e-39 Score=351.76 Aligned_cols=260 Identities=26% Similarity=0.403 Sum_probs=208.9
Q ss_pred HHHhhccccccCcEEEEEEEE------CCCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~ 598 (854)
.+.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++..++..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 103 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence 345678999999999999985 2467899999975532 3356788999999999 9999999999999999999
Q ss_pred EEEEecCCCCHHHhhccccc--------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC
Q 003046 599 LVYEFMHNGTLKEHLYGTLT--------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTH 180 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEET
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcC
Confidence 99999999999999964321 123589999999999999999999998 9999999999999999
Q ss_pred CCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccch
Q 003046 665 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 742 (854)
Q Consensus 665 ~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l 742 (854)
++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||....... .+
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~ 257 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---KF 257 (313)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---HH
T ss_pred CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---HH
Confidence 999999999999866544332 2233457889999999999999999999999999999999 999997654221 11
Q ss_pred HHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
... ...+. . ..... .....+.+++.+|++.+|++||++.||+++|++++.
T Consensus 258 ~~~----~~~~~-~----~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 258 YKM----IKEGF-R----MLSPE----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHH----HHHTC-C----CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH----hccCC-C----CCCcc----cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111 11110 0 00011 122457899999999999999999999999998865
No 74
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2e-38 Score=342.74 Aligned_cols=259 Identities=17% Similarity=0.230 Sum_probs=207.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+|+.+++++ +|+|++++++++......++||||+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 445788999999999999874 68999999986442 345788999999999 7999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc-----EEEEEeccccccc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAV 680 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~-----~kL~DFGla~~~~ 680 (854)
+++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 89 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999999532 34589999999999999999999998 9999999999999987776 9999999998665
Q ss_pred CCCcc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 681 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 681 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QKYERIGEKKQSTP 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HHHHHHHHHHHHSC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-HHHHHHHhhccCcc
Confidence 43321 234456999999999999999999999999999999999999999875422221 11111111111111
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
... +... ....+.+++.+|++.+|++||++.+|++.|++++.
T Consensus 242 ~~~-----~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 242 LRE-----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHH-----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHH-----HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 100 0111 22468899999999999999999999999999865
No 75
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=359.21 Aligned_cols=260 Identities=25% Similarity=0.422 Sum_probs=207.5
Q ss_pred HHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.+.||+|+||.||+|+.. +++.||||+++... ......+.+|+.++++++||||+++++++...+..++
T Consensus 48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 127 (343)
T 1luf_A 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 127 (343)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEE
Confidence 3445788999999999999875 34789999997553 2335678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccc--------------------cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCC
Q 003046 600 VYEFMHNGTLKEHLYGTLTH--------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 659 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~N 659 (854)
||||+++|+|.+++...... ...+++..++.++.||+.||.|||+. +|+||||||+|
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N 204 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN 204 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcce
Confidence 99999999999999653211 25689999999999999999999998 99999999999
Q ss_pred eEEcCCCcEEEEEecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccc
Q 003046 660 ILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGA 737 (854)
Q Consensus 660 ILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~ 737 (854)
||++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 283 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE- 283 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-
Confidence 9999999999999999975433211 22233458899999999999999999999999999999999 99999764411
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+.. .+..+.... .... ....+.+++.+|++.+|++||++.||+++|+++...
T Consensus 284 ---~~~~----~~~~~~~~~-----~~~~----~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 284 ---EVIY----YVRDGNILA-----CPEN----CPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp ---HHHH----HHHTTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred ---HHHH----HHhCCCcCC-----CCCC----CCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1111 122222211 1111 224588999999999999999999999999998653
No 76
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=357.57 Aligned_cols=247 Identities=23% Similarity=0.355 Sum_probs=196.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
.+.||+|+||.||+|... +|+.||||+++.........+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 457999999999999876 6899999999876656667899999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE--cCCCcEEEEEecccccccCCCccee
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL--DKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl--~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 998853 234688999999999999999999998 99999999999999 5678999999999986644322 2
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. . ...... .. +........
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----~---~i~~~~-~~--~~~~~~~~~ 315 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL----N---NILACR-WD--LEDEEFQDI 315 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----H---HHHHTC-CC--SCSGGGTTS
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH----H---HHHhcc-CC--CChhhhccC
Confidence 3346999999999999999999999999999999999999999765422111 1 111111 00 011111122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.+++.+|++.+|++||++.|+++|
T Consensus 316 ----~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 316 ----SEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp ----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 2357899999999999999999999985
No 77
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.3e-39 Score=372.06 Aligned_cols=253 Identities=25% Similarity=0.423 Sum_probs=201.5
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++.. +..++||||+++|
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~g 263 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG 263 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCC
Confidence 45678999999999999999988889999997543 335679999999999999999999999976 6789999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 264 sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 264 SLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp BHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 999999532 234588999999999999999999998 999999999999999999999999999986654333333
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....+|..|+|||.+.+..++.++|||||||++|||++ |+.||.+.... .+... +..+.. ..
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~~----i~~~~~---------~~ 401 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQ----VERGYR---------MP 401 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHH----HHTTCC---------CC
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHcCCC---------CC
Confidence 34457889999999999999999999999999999999 99999765421 12221 122210 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+++.+|++.+|++|||+.+|++.|+.+.
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 11122346889999999999999999999999999875
No 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=9e-39 Score=356.36 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=202.8
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
..|.+.+.||+|+||.||+|..+ +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45667889999999999999886 689999999975532 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC---CcEEEEEecccccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~~kL~DFGla~~~ 679 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 109 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 109 LVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp CCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred cCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999998843 45688999999999999999999998 99999999999999865 45999999999865
Q ss_pred cCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+... +..+... .
T Consensus 182 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~----~~~~~----i~~~~~~--~ 249 (362)
T 2bdw_A 182 NDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQ----IKAGAYD--Y 249 (362)
T ss_dssp TTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCC--C
T ss_pred cCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHH----HHhCCCC--C
Confidence 4332 223456999999999999999999999999999999999999999765421 12221 1111110 0
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ ...+.+++.+|++.||++||++.|+++|
T Consensus 250 ~~~~~~~~----~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSPEWDTV----TPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTTGGGGS----CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CcccccCC----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00011112 2357899999999999999999999876
No 79
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.1e-39 Score=352.51 Aligned_cols=262 Identities=25% Similarity=0.368 Sum_probs=206.2
Q ss_pred HhhccccccCcEEEEEEEEC-----CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLV 600 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-----~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV 600 (854)
.+.+.||+|+||+||++.++ +++.||||+++... ......+.+|++++++++||||+++++++... ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 56789999999999998753 57899999997653 23356789999999999999999999999874 578999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp ECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999843 3488999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCcc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccc-----cccc--hHHHHHHhhh
Q 003046 681 DGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA-----NCRN--IVQWAKLHIE 751 (854)
Q Consensus 681 ~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~-----~~~~--l~~~~~~~~~ 751 (854)
..... ......||..|+|||.+.+..++.++|||||||++|||++|+.||....... .... -.........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 44322 2234458889999999999999999999999999999999999986533110 0000 0001111111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.+ .....+......+.+++.+|++.+|++|||+.||++.|+.+....
T Consensus 266 ~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 266 RG---------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cc---------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 11 111112223346889999999999999999999999999886544
No 80
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.9e-39 Score=351.08 Aligned_cols=250 Identities=23% Similarity=0.326 Sum_probs=196.0
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecC---------
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--------- 595 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--------- 595 (854)
.+.+.+.||+|+||.||+|+.+ +++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 3455789999999999999987 78999999997543 234567899999999999999999999986543
Q ss_pred ------------------------------------------------eEEEEEEecCCCCHHHhhcccccccccccHHH
Q 003046 596 ------------------------------------------------RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIK 627 (854)
Q Consensus 596 ------------------------------------------------~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~ 627 (854)
..++||||+++|+|.+++.... ......+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~ 165 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHGV 165 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhHH
Confidence 3799999999999999996543 233456667
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc-----------ceeecccccccc
Q 003046 628 RLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-----------HVSSIVRGTVGY 696 (854)
Q Consensus 628 ~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~-----------~~~~~~~gt~~Y 696 (854)
++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 889999999999999998 999999999999999999999999999986654321 122334699999
Q ss_pred cCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHH
Q 003046 697 LDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIE 776 (854)
Q Consensus 697 ~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~ 776 (854)
+|||.+.+..++.++|||||||++|||++|..|+.... .+.. ........ .........+.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~------~~~~----~~~~~~~~---------~~~~~~~~~~~ 303 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV------RIIT----DVRNLKFP---------LLFTQKYPQEH 303 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH------HHHH----HHHTTCCC---------HHHHHHCHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH------HHHH----HhhccCCC---------cccccCChhHH
Confidence 99999999999999999999999999999987753221 1111 11111110 11122334568
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 003046 777 EKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 777 ~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+++.+|++.+|++||++.|++++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCCCCcCCCHHHHhhc
Confidence 89999999999999999999875
No 81
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.7e-39 Score=353.26 Aligned_cols=260 Identities=24% Similarity=0.382 Sum_probs=194.6
Q ss_pred HHHhhccccccCcEEEEEEEECCC----cEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeE---
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKDG----KEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS--- 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~~----~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~--- 597 (854)
.+.+.+.||+|+||.||+|++... ..||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 455678999999999999987643 27999998754 233456789999999999999999999999877655
Q ss_pred ---EEEEEecCCCCHHHhhccccc--ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEE
Q 003046 598 ---VLVYEFMHNGTLKEHLYGTLT--HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 598 ---~lV~e~~~~gsL~~~L~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~D 672 (854)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEee
Confidence 999999999999999854321 222588999999999999999999998 999999999999999999999999
Q ss_pred ecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhh
Q 003046 673 FGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 673 FGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.....
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~--- 253 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----EIYNYLI--- 253 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH---
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH----HHHHHHh---
Confidence 9999865443221 2233457889999999999999999999999999999999 99999765422 2222111
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..... .........+.+++.+|++.||++|||+.|+++.|++++..
T Consensus 254 ~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 254 GGNRL----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp TTCCC----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCC----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11110 01112224688999999999999999999999999998753
No 82
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.3e-38 Score=348.37 Aligned_cols=267 Identities=22% Similarity=0.291 Sum_probs=191.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.+.||+|+||.||+|..+ +++.||||+++.... .....+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4556789999999999999876 589999999975532 33467889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccc--cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 605 HNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 605 ~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
+ |+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 8 59999885432 1224588999999999999999999998 9999999999999999999999999999865432
Q ss_pred CcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc----
Q 003046 683 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG---- 757 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~---- 757 (854)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+....... .......
T Consensus 162 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~ 239 (317)
T 2pmi_A 162 VN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTP-NESLWPSVTKL 239 (317)
T ss_dssp CC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC-CTTTCGGGGGC
T ss_pred cc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC-ChhHhhhhhhh
Confidence 22 2233468999999999976 468999999999999999999999997654222111111110000 0000000
Q ss_pred -ccCCccc------------CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 -IIDPSLL------------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 -~id~~l~------------~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.+. ..........+.+++.+|++.||++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000 00000122368899999999999999999999886
No 83
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=348.55 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=194.8
Q ss_pred HHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhc-CCCceeeEeeeeeecCe
Q 003046 521 SDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 521 ~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~ 596 (854)
+++....+.+.++||+|+||+||+|+.. +++.||||++..... .....+..|+..+.++ +||||++++++|.+++.
T Consensus 52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~ 131 (311)
T 3p1a_A 52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI 131 (311)
T ss_dssp SCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred cchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE
Confidence 4455566777889999999999999987 789999999865432 2233455566665555 89999999999999999
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
.++||||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceee
Confidence 99999999 67998888532 35689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 677 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
+..... .......||++|+|||++.+ .++.++|||||||++|||++|..|+.... .| ..+..+...
T Consensus 205 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---------~~--~~~~~~~~~ 270 (311)
T 3p1a_A 205 VELGTA--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---------GW--QQLRQGYLP 270 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---------HH--HHHTTTCCC
T ss_pred eecccC--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HH--HHHhccCCC
Confidence 765432 22334569999999998875 78999999999999999999977664322 01 111111111
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.+... ....+.+++.+|++.+|++|||+.|++++
T Consensus 271 ----~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 271 ----PEFTAG----LSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----HHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----cccccC----CCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 111111 23468899999999999999999999875
No 84
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.1e-38 Score=350.48 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=180.7
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
+.||+|+||.||+|..+ +++.||||++... ....+.+|+.+++++. ||||+++++++.+.+..++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 67999999999999986 6899999998643 3456788999999997 99999999999999999999999999999
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC---cEEEEEecccccccCCCcce
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~~kL~DFGla~~~~~~~~~~ 686 (854)
.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....... .
T Consensus 94 ~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~ 165 (325)
T 3kn6_A 94 FERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-P 165 (325)
T ss_dssp HHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-c
Confidence 999853 45689999999999999999999998 999999999999998765 899999999986543322 2
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.............+.. ..+..+... . ...
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-~~i~~~~~~--~----~~~ 238 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM-KKIKKGDFS--F----EGE 238 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH-HHHTTTCCC--C----CSH
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH-HHHHcCCCC--C----Ccc
Confidence 334568999999999999999999999999999999999999997654322222222222 222222211 0 000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........+.+++.+|++.||++|||+.|+++|
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 001123468899999999999999999999865
No 85
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.4e-38 Score=343.71 Aligned_cols=260 Identities=20% Similarity=0.243 Sum_probs=196.2
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||+||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++..++..++||||++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC
Confidence 45678999999999999986 588999999975532 224668899999999999999999999999999999999998
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 85 ~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 156 (292)
T 3o0g_A 85 Q-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp E-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred C-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence 6 55555532 245689999999999999999999998 99999999999999999999999999998654322 2
Q ss_pred eeecccccccccCccccccCc-CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc---CCccccc--
Q 003046 686 VSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES---GDIQGII-- 759 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~---~~~~~~i-- 759 (854)
......||+.|+|||++.+.. ++.++|||||||++|||++|..|+..... .............. .......
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND---VDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS---HHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC---HHHHHHHHHHHhCCCChhhhhhhccc
Confidence 233456899999999998765 79999999999999999998888533221 11111111111110 0000000
Q ss_pred -C---------CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 -D---------PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 -d---------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+ ..............+.+++.+|++.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000001111223457899999999999999999999875
No 86
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.8e-39 Score=353.20 Aligned_cols=263 Identities=24% Similarity=0.382 Sum_probs=208.5
Q ss_pred HHHhhccccccCcEEEEEEEECC------CcEEEEEEEecCC-ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~ 598 (854)
.+.+.+.||+|+||.||+|.... ...||+|++.... ......+.+|+++++++ +||||+++++++...+..+
T Consensus 47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 126 (333)
T 2i1m_A 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126 (333)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceE
Confidence 34567899999999999998752 2479999997553 23456788999999999 8999999999999999999
Q ss_pred EEEEecCCCCHHHhhccccc----------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcE
Q 003046 599 LVYEFMHNGTLKEHLYGTLT----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 668 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~ 668 (854)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEE
T ss_pred EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeE
Confidence 99999999999999864311 134578999999999999999999998 99999999999999999999
Q ss_pred EEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHH
Q 003046 669 KVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWA 746 (854)
Q Consensus 669 kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~ 746 (854)
||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||....... .+....
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~ 280 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS---KFYKLV 280 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---HHHHHH
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---HHHHHH
Confidence 99999999865433222 2234457889999999999999999999999999999999 999997654221 111111
Q ss_pred HHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 003046 747 KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 808 (854)
Q Consensus 747 ~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~ 808 (854)
..+.. ... +......+.+++.+|++.+|++||++.||+++|+++....+
T Consensus 281 ----~~~~~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 281 ----KDGYQ-----MAQ----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp ----HHTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----hcCCC-----CCC----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 11110 000 11112457899999999999999999999999999876543
No 87
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9e-39 Score=349.84 Aligned_cols=243 Identities=24% Similarity=0.386 Sum_probs=200.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.+ +|+.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence 345688999999999999986 68999999997542 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 88 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 88 IEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp CCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999853 45688999999999999999999998 999999999999999999999999999986533
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. . ..... +.. .+
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~---~~i~~-~~~------~~ 222 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT----Y---EKILN-AEL------RF 222 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----H---HHHHH-CCC------CC
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----H---HHHHh-CCC------CC
Confidence 22345799999999999999999999999999999999999999976542111 1 11111 111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++|| +++||++|
T Consensus 223 p~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 223 PPFF----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CTTS----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCC----CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1122 23578999999999999999 89999876
No 88
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7.7e-39 Score=343.52 Aligned_cols=259 Identities=24% Similarity=0.378 Sum_probs=203.7
Q ss_pred HHhhccccccCcEEEEEEEECC----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|++.. +..||||++.... ....+.+.+|+.++++++||||+++++++..+ ..++|||
T Consensus 14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e 92 (281)
T 3cc6_A 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIME 92 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEE
T ss_pred eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEe
Confidence 4457899999999999998652 3369999987653 33456789999999999999999999998754 5689999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 93 LYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp CCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred cCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999853 234588999999999999999999998 9999999999999999999999999999866544
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+..... .+....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~~~~~----~~~~~~---- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIGVLE----KGDRLP---- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHHHHHH----HTCCCC----
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHHHHHh----cCCCCC----
Confidence 3333344557889999999998999999999999999999998 99999754422 2222111 111000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIEREA 810 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~~~ 810 (854)
.... ....+.+++.+|++.+|++||++.||+++|+.+...+.+.
T Consensus 235 -~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~i 278 (281)
T 3cc6_A 235 -KPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 278 (281)
T ss_dssp -CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhhh
Confidence 0111 2235889999999999999999999999999998766543
No 89
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-38 Score=351.38 Aligned_cols=257 Identities=22% Similarity=0.252 Sum_probs=197.6
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC-----CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-----SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
..|.+.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 105 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL 105 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence 34566889999999999999886 6889999998754 22345678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccc------------------------------------cccccHHHHHHHHHHHHHHHHHHH
Q 003046 600 VYEFMHNGTLKEHLYGTLTH------------------------------------EQRINWIKRLEIAEDAAKGIEYLH 643 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH 643 (854)
||||+++|+|.+++...... ...+++..+..++.|++.||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998531111 223467778899999999999999
Q ss_pred hCCCCceeccCCCCCCeEEcCCC--cEEEEEecccccccCCC---cceeecccccccccCcccccc--CcCCCcchhhhH
Q 003046 644 TGCVPAIIHRDLKSSNILLDKHM--RAKVSDFGLSKFAVDGA---SHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSF 716 (854)
Q Consensus 644 ~~~~~~ivHrDIkp~NILl~~~~--~~kL~DFGla~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~ 716 (854)
+. +|+||||||+|||++.++ .+||+|||+++...... ........||+.|+|||.+.+ ..++.++|||||
T Consensus 186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 98 999999999999998776 89999999998553321 112344569999999999975 678999999999
Q ss_pred HHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 003046 717 GVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEV 796 (854)
Q Consensus 717 Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV 796 (854)
||++|||++|+.||......+.. ......... ........ ....+.+++.+|++.+|++||++.|+
T Consensus 263 G~il~el~~g~~pf~~~~~~~~~-------~~~~~~~~~---~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDADTI-------SQVLNKKLC---FENPNYNV----LSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCCC---TTSGGGGG----SCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHCCCCCCCCChHHHH-------HHHHhcccc---cCCccccc----CCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 99999999999999765422111 111111100 00000111 12357899999999999999999999
Q ss_pred HHH
Q 003046 797 LKD 799 (854)
Q Consensus 797 ~~~ 799 (854)
+++
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 875
No 90
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9e-39 Score=352.34 Aligned_cols=244 Identities=22% Similarity=0.343 Sum_probs=199.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 445789999999999999975 68999999987542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+ +|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 91 ~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 91 A-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp C-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred C-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9 7899888843 45689999999999999999999998 99999999999999999999999999998654432
Q ss_pred cceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...........+. .+. .
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~--------~~~------~- 225 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN--------SCV------Y- 225 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC--------SSC------C-
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH--------cCC------C-
Confidence 2234569999999999988776 679999999999999999999997655332221110 000 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+......+.+++.+|++.||.+|||+.|++++
T Consensus 226 ---~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 ---VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ---CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ---CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0111122357899999999999999999999886
No 91
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.1e-39 Score=346.05 Aligned_cols=251 Identities=24% Similarity=0.419 Sum_probs=200.1
Q ss_pred HHHhhccccccCcEEEEEEEECC-C-------cEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD-G-------KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~-~-------~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
.+.+.+.||+|+||.||+|.... + ..||+|++........+.+.+|++++++++||||+++++++..++..+
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI 88 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCE
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCE
Confidence 34567899999999999998763 3 479999997666566678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc--------EEE
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--------AKV 670 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--------~kL 670 (854)
+||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++. +||
T Consensus 89 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 89 LVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp EEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred EEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999642 34488999999999999999999998 9999999999999998887 999
Q ss_pred EEecccccccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcc-cccccccccccchHHHHHH
Q 003046 671 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEA-ISNEKFGANCRNIVQWAKL 748 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~p-f~~~~~~~~~~~l~~~~~~ 748 (854)
+|||+++.... .....||+.|+|||.+.+ ..++.++|||||||++|||++|..| +..... ......
T Consensus 163 ~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~~~~~--- 230 (289)
T 4fvq_A 163 SDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS----QRKLQF--- 230 (289)
T ss_dssp CCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHHHH---
T ss_pred ccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch----HHHHHH---
Confidence 99999865422 123458999999999987 7789999999999999999996544 433221 111111
Q ss_pred hhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 749 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 749 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
......... .. ...+.+++.+|++.+|++|||+.|++++|++++...
T Consensus 231 ~~~~~~~~~--------~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 231 YEDRHQLPA--------PK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHTTCCCCC--------CS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred hhccCCCCC--------CC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 111111111 11 124778999999999999999999999999987643
No 92
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-39 Score=351.98 Aligned_cols=263 Identities=25% Similarity=0.383 Sum_probs=204.6
Q ss_pred HHHhhccccccCcEEEEEEEE-----CCCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~-----~~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~ 598 (854)
.+.+.+.||+|+||.||+|++ .+++.||||++.... ......+.+|++++++++||||+++++++... ...+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 345678999999999999984 368899999997543 23346789999999999999999999999876 6689
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 102 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccc
Confidence 999999999999998532 34588999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCcc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccc-------cccccchHHHHHHh
Q 003046 679 AVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-------GANCRNIVQWAKLH 749 (854)
Q Consensus 679 ~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~-------~~~~~~l~~~~~~~ 749 (854)
....... ......||..|+|||.+.+..++.++|||||||++|||++|..|+..... +.....-.......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 6544322 22345688899999999999999999999999999999999998753210 00000111111111
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
...+.. ...+......+.+++.+|++.+|++|||+.||++.|++++
T Consensus 256 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKR---------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCC---------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 1111122346889999999999999999999999999875
No 93
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-38 Score=355.06 Aligned_cols=266 Identities=16% Similarity=0.237 Sum_probs=203.3
Q ss_pred HHHhhccccccCcEEEEEEEECC------CcEEEEEEEecCCccc-----------hhchHHHHHHhhhcCCCceeeEee
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSYQG-----------KREFTNEVTLLSRIHHRNLVQFLG 589 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~------~~~vAvK~l~~~~~~~-----------~~~~~~E~~~l~~l~HpnIv~l~g 589 (854)
.|.+.+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..+..++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 45567899999999999998864 4789999987553211 112344566677788999999999
Q ss_pred eeeec----CeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc--
Q 003046 590 YCQEE----GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-- 663 (854)
Q Consensus 590 ~~~~~----~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-- 663 (854)
++... ...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 99764 4589999999 9999999853 235689999999999999999999998 999999999999999
Q ss_pred CCCcEEEEEecccccccCCCcc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccc
Q 003046 664 KHMRAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA 737 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~ 737 (854)
.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 8899999999999765432211 112345999999999999999999999999999999999999999864321
Q ss_pred cccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 738 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 738 ~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.....+...... ..+.+++++.+.... ....+.+++..|++.+|++||++.+|++.|+.++..
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 268 --PKYVRDSKIRYR-ENIASLMDKCFPAAN---APGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp --HHHHHHHHHHHH-HCHHHHHHHHSCTTC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhh-hhHHHHHHHhccccc---CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 122222222211 123333333332111 123578999999999999999999999999998754
No 94
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=341.60 Aligned_cols=253 Identities=26% Similarity=0.408 Sum_probs=205.1
Q ss_pred ccccccCcEEEEEEEEC---CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999864 57889999997643 33456788999999999999999999999 556789999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce-
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV- 686 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~- 686 (854)
+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 95 ~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 95 PLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 99999853 245689999999999999999999998 99999999999999999999999999998664433222
Q ss_pred -eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 687 -SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 687 -~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+...
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~----i~~~~~~-------- 232 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAF----IEQGKRM-------- 232 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHHHH----HHTTCCC--------
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----HHHHH----HhcCCcC--------
Confidence 223346899999999998899999999999999999998 99999765421 12221 1111111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 808 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~ 808 (854)
..+......+.+++..|++.+|++||++.||+++|+.+.....
T Consensus 233 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 233 -ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp -CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1111223468899999999999999999999999999876443
No 95
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4e-39 Score=356.41 Aligned_cols=246 Identities=24% Similarity=0.383 Sum_probs=200.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++|||
T Consensus 19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E 98 (345)
T 1xjd_A 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 98 (345)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 345789999999999999987 58899999997542 22345577899999887 89999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 99 YLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999853 35688999999999999999999998 9999999999999999999999999999754322
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+ ..+. +.
T Consensus 172 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i----~~~~------~~ 236 (345)
T 1xjd_A 172 D-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE----ELFHSI----RMDN------PF 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH----HHCC------CC
T ss_pred C-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH----HHHHHH----HhCC------CC
Confidence 2 2234567999999999999999999999999999999999999999765421 121111 1111 11
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSIS-EVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~-eV~~~ 799 (854)
+.... ...+.+++.+|++.+|++||++. ||.+|
T Consensus 237 ~p~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 237 YPRWL----EKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp CCTTS----CHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred CCccc----CHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 11112 23578999999999999999997 77654
No 96
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-38 Score=346.18 Aligned_cols=261 Identities=30% Similarity=0.500 Sum_probs=200.3
Q ss_pred HHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
....+.+.++||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 3344567789999999999999865 468999887543 2334678899999999999999999998754 5578999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 111 QWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp ECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred ecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 99999999999853 345689999999999999999999998 999999999999999999999999999975433
Q ss_pred C-CcceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 682 G-ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 682 ~-~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
. .........||+.|+|||.+. +..++.++|||||||++|||++|+.||......+ .+..... .+....
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---~~~~~~~----~~~~~~ 257 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFMVG----RGYASP 257 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHH----HTCCCC
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH---HHHHHHh----cCCCCc
Confidence 1 222233456999999999986 5678889999999999999999999997644211 1111111 111111
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+ +.+... ....+.+++.+|++.+|++||++.||+++|+.+..
T Consensus 258 ~~-~~~~~~----~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 258 DL-SKLYKN----CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CS-TTSCSS----SCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred ch-hhhhcC----CcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 01 011112 23468899999999999999999999999998643
No 97
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.2e-38 Score=342.72 Aligned_cols=262 Identities=24% Similarity=0.381 Sum_probs=199.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 113 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEec
Confidence 556789999999999999875 68999999997532 23345688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.........+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~ 190 (310)
T 2wqm_A 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190 (310)
T ss_dssp CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence 999999999865433456688999999999999999999998 99999999999999999999999999997654322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ........ +.........
T Consensus 191 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~-~~~~~~~~~~---- 259 (310)
T 2wqm_A 191 T-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKK-IEQCDYPPLP---- 259 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHH-HHTTCSCCCC----
T ss_pred c-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHH-hhcccCCCCc----
Confidence 2 22334689999999999999999999999999999999999999975431 11121111 2222211111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
.... ...+.+++.+|++.||++||++.+|+++|+++....
T Consensus 260 ~~~~----~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 260 SDHY----SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp TTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 1112 235789999999999999999999999999986654
No 98
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.8e-38 Score=340.01 Aligned_cols=249 Identities=32% Similarity=0.577 Sum_probs=198.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccc-------hhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG-------KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~-------~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
+.+.+.||+|+||.||+|++. +++.||||++....... .+.+.+|++++++++||||+++++++.... ++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~l 98 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RM 98 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EE
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eE
Confidence 445789999999999999985 68999999986543222 156889999999999999999999997665 69
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eeccCCCCCCeEEcCCCc-----EEEEE
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMR-----AKVSD 672 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~-----~kL~D 672 (854)
||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++. +||+|
T Consensus 99 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred EEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 9999999999988853 345689999999999999999999998 7 999999999999988776 99999
Q ss_pred ecccccccCCCcceeecccccccccCccccc--cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYI--SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
||+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||....... ........
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~~~~ 243 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIR 243 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH-----HHHHHHHH
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH-----HHHHHHHh
Confidence 999974332 233456999999999984 4567889999999999999999999997654221 11111111
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
..+ . .+.+... ....+.+++.+|++.+|++||++.||++.|++
T Consensus 244 ~~~-~----~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 EEG-L----RPTIPED----CPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HSC-C----CCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ccC-C----CCCCCcc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111 1 1111122 23468899999999999999999999999986
No 99
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.6e-38 Score=349.35 Aligned_cols=246 Identities=23% Similarity=0.331 Sum_probs=191.6
Q ss_pred HHhhccccccCcEEEEEEEE----CCCcEEEEEEEecCC----ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
+.+.+.||+|+||.||+|+. .+++.||||+++... ......+.+|+.++++++||||+++++++...+..++
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 98 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL 98 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEE
Confidence 45678999999999999987 468999999997542 2234567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 99 ILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999999843 44678889999999999999999998 9999999999999999999999999998754
Q ss_pred cCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... +... .. ....
T Consensus 172 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~---i~-~~~~---- 238 (327)
T 3a62_A 172 IHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----TIDK---IL-KCKL---- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHH---HH-HTCC----
T ss_pred ccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----HHHH---HH-hCCC----
Confidence 3222 22334569999999999999999999999999999999999999997654211 1111 11 1111
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
.+... ....+.+++.+|++.+|++|| ++.|+++|
T Consensus 239 --~~p~~----~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 --NLPPY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --CCCTT----SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCCCC----CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 01111 223578999999999999999 78888876
No 100
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=354.60 Aligned_cols=273 Identities=21% Similarity=0.275 Sum_probs=211.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecC--eEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 445789999999999999987 48999999997543 233566789999999999999999999998755 77999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE----cCCCcEEEEEecccccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~~kL~DFGla~~~ 679 (854)
+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred CCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999996432 223389999999999999999999998 99999999999999 77888999999999865
Q ss_pred cCCCcceeecccccccccCcccccc--------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYIS--------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.........
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 167 EDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred cCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 4322 2234569999999999875 56788999999999999999999999754433222222221111111
Q ss_pred cCCccccc---------CCc--ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 752 SGDIQGII---------DPS--LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 752 ~~~~~~~i---------d~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
...+..+. ... ............+.+++.+|++.||++||++.|+++.++.++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111000 001 11233466777889999999999999999999999999988753
No 101
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.6e-38 Score=352.59 Aligned_cols=242 Identities=24% Similarity=0.324 Sum_probs=200.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 123 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCC
Confidence 45688999999999999986 68999999997542 223456788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 ~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 124 AGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp TTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 99999999853 34688999999999999999999998 9999999999999999999999999999865432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. .+..+.. .+.
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~----~i~~~~~------~~p 258 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYE----KIVSGKV------RFP 258 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCC------CCC
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH----HHHH----HHHcCCC------CCC
Confidence 23456999999999999999999999999999999999999999765421 1111 1111211 111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
... ...+.+++.+|++.||++||+ +.||++|
T Consensus 259 ~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 SHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TTC----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCC----CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 122 235789999999999999998 8888876
No 102
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.6e-38 Score=336.62 Aligned_cols=249 Identities=21% Similarity=0.314 Sum_probs=200.8
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec--CeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+++ ++.||||++.... ....+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred hHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 345789999999999999986 8999999997653 23346789999999999999999999999877 788999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
+++|+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.++|+|||++.....
T Consensus 91 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 91 MPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp CTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999642 233589999999999999999999997 7 99999999999999999999999998754222
Q ss_pred CCcceeecccccccccCccccccCcCCC---cchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTD---KSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~---~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
....||+.|+|||.+.+...+. ++|||||||++|||++|+.||....... . .......+.
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~---~~~~~~~~~---- 228 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----I---GMKVALEGL---- 228 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH----H---HHHHHHSCC----
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH----H---HHHHHhcCC----
Confidence 2235899999999998766555 7999999999999999999997654211 1 111111111
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+.+... ....+.+++.+|++.+|++|||+.||++.|+++.
T Consensus 229 -~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 229 -RPTIPPG----ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp -CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred -CCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1111122 2335889999999999999999999999999864
No 103
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.9e-38 Score=349.61 Aligned_cols=262 Identities=23% Similarity=0.432 Sum_probs=208.7
Q ss_pred HHHHhhccccccCcEEEEEEEEC--------CCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeeecC
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 595 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~ 595 (854)
..+.+.+.||+|+||.||+|++. +++.||||++..... .....+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 34556789999999999999873 467899999975432 3346788999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHhhccccc------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~ 663 (854)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 191 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEc
Confidence 99999999999999999965321 123588999999999999999999998 999999999999999
Q ss_pred CCCcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccc
Q 003046 664 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 741 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~ 741 (854)
.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~ 267 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----E 267 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----H
Confidence 9999999999999865443222 2233457889999999998899999999999999999999 99999765421 2
Q ss_pred hHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
+... +..+... .... .....+.+++.+|++.+|++||++.||+++|++++...
T Consensus 268 ~~~~----~~~~~~~-----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 268 LFKL----LKEGHRM-----DKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHHH----HHHTCCC-----CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHH----HhcCCCC-----CCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 2221 1111110 0111 12245889999999999999999999999999987654
No 104
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=354.28 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=193.3
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCc--cchhchHHHHHHhhhcCC--CceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHH--RNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H--pnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|...+++.||||++..... .....+.+|+++|.+++| |||+++++++..++..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 345789999999999999998899999999875432 234678899999999976 999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 90 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999853 45688999999999999999999998 999999999999997 6789999999998654432
Q ss_pred cc-eeecccccccccCcccccc-----------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 684 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 684 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~ 235 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAIID 235 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHHHHC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh------hHHHHHHHHhc
Confidence 22 2334579999999999865 678889999999999999999999996532 11111111111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
+.....++......+.+++.+|++.||++|||+.|+++|-
T Consensus 236 ---------~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 236 ---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---------CCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1111111111123578999999999999999999999873
No 105
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=344.81 Aligned_cols=252 Identities=29% Similarity=0.474 Sum_probs=194.9
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.+.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++|+
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~ 85 (307)
T 2eva_A 11 EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGS 85 (307)
T ss_dssp EEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCB
T ss_pred eeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCC
Confidence 45688999999999999986 789999998643 345678999999999999999999999874 4789999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc-EEEEEecccccccCCCccee
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-AKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~-~kL~DFGla~~~~~~~~~~~ 687 (854)
|.+++.... ....+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++..... .
T Consensus 86 L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~ 160 (307)
T 2eva_A 86 LYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----M 160 (307)
T ss_dssp HHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred HHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----c
Confidence 999996432 2334678889999999999999999943238999999999999998886 799999999754322 2
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....|.. ..+.. +.+....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~---~~~~~-----~~~~~~~ 229 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA---FRIMWAV---HNGTR-----PPLIKNL 229 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH---HHHHHHH---HTTCC-----CCCBTTC
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH---HHHHHHH---hcCCC-----CCccccc
Confidence 23458999999999999999999999999999999999999997543111 1111111 11111 1111222
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+.+++.+|++.+|++|||+.||+++|+.+..
T Consensus 230 ----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 230 ----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred ----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 2357899999999999999999999999998754
No 106
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=360.83 Aligned_cols=251 Identities=23% Similarity=0.258 Sum_probs=201.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|+.+ +++.||||++++.. ......+.+|..++..++||||+++++++.+.+..++||||+
T Consensus 64 ~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~ 143 (412)
T 2vd5_A 64 EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYY 143 (412)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCC
Confidence 34578999999999999986 68999999997532 223456889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 144 ~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 144 VGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999999532 34688999999999999999999998 999999999999999999999999999987655444
Q ss_pred ceeecccccccccCccccc-------cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYI-------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~-------~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+... -..
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~----~~~-- 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH----LSL-- 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH----CCC--
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC----cCC--
Confidence 3444567999999999997 357899999999999999999999999765533222223222111 000
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR---PSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Psm~eV~~~ 799 (854)
+...... ...+.+++.+|+. +|++| |+++||.+|
T Consensus 292 ---p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 ---PLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---C----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---CccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1111112 2357899999999 99988 689999876
No 107
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.6e-38 Score=349.06 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=199.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++.... .....+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e 90 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 90 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence 345689999999999999987 588999999976532 2234577899999988 89999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 91 YVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999843 35688999999999999999999998 9999999999999999999999999999753322
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc-cchHHHHHHhhhcCCcccccCC
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-RNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~-~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..........+..+..
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 2 2234457999999999999999999999999999999999999999653211110 0111122222222211
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm------~eV~~~ 799 (854)
.+... ....+.+++.+|++.||++||++ .|+++|
T Consensus 237 ~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 237 RIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CCCTT----SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CCCCC----CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11111 22357899999999999999995 677665
No 108
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.3e-38 Score=337.73 Aligned_cols=250 Identities=21% Similarity=0.268 Sum_probs=202.6
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
..|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 34566789999999999999987 47789999998765566778999999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---cCCCcEEEEEecccccccC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~~kL~DFGla~~~~~ 681 (854)
++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++.....
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 89 TGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999998843 45688999999999999999999998 99999999999999 7889999999999976543
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.. ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||......+ +.. .+..+.... ..
T Consensus 162 ~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~----~~~~~~~~~--~~ 228 (277)
T 3f3z_A 162 GK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE----VML----KIREGTFTF--PE 228 (277)
T ss_dssp TS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH----HHHHCCCCC--CH
T ss_pred cc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH----HHH----HHHhCCCCC--Cc
Confidence 32 22344699999999988654 8999999999999999999999997654211 111 111111100 00
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ....+.+++.+|++.+|++||++.|+++|
T Consensus 229 ~~~~~----~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 229 KDWLN----VSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhhhc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001 12467899999999999999999999875
No 109
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.9e-38 Score=352.10 Aligned_cols=250 Identities=26% Similarity=0.330 Sum_probs=192.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
|.+.+.||+|+||+||+++.. +++.||||++.... .....+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 100 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASG 100 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCC
Confidence 556789999999999999987 68999999997543 2346688999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc--EEEEEecccccccCCCc
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--~kL~DFGla~~~~~~~~ 684 (854)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 101 ~~L~~~l~----~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 101 GELYERIC----NAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999884 345689999999999999999999998 9999999999999987765 999999999743222
Q ss_pred ceeecccccccccCccccccCcCCCc-chhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDK-SDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~-sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...........+... ... .... +
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~---~~~-~~~~------~ 241 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR---ILS-VKYS------I 241 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHH---HHT-TCCC------C
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHH---Hhc-CCCC------C
Confidence 12233469999999999988887665 89999999999999999999865533332222221 111 1100 0
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. .......+.+++.+|++.+|++|||+.|+++|
T Consensus 242 ~~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 PD--DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CT--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CC--cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 00112357899999999999999999999987
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.6e-38 Score=352.71 Aligned_cols=246 Identities=24% Similarity=0.294 Sum_probs=199.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||||+++++++...+..++|||
T Consensus 22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E 101 (353)
T 2i0e_A 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 101 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence 345689999999999999987 47889999997542 22345677899999888 89999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 102 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999853 35688999999999999999999998 9999999999999999999999999999753322
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+. .. .+.. .
T Consensus 175 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----~~~~~---i~-~~~~------~ 239 (353)
T 2i0e_A 175 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQS---IM-EHNV------A 239 (353)
T ss_dssp -TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH---HH-HCCC------C
T ss_pred -CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH----HHHHH---HH-hCCC------C
Confidence 22234557999999999999999999999999999999999999999765422 11111 11 1111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----m~eV~~~ 799 (854)
+... ....+.+++.+|++.+|++||+ +.||.+|
T Consensus 240 ~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 YPKS----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCTT----SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCC----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1111 2245789999999999999995 6788776
No 111
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.6e-38 Score=345.41 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=203.9
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34667899999999999999987 6899999999765322 2456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC----cEEEEEec
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 674 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~~kL~DFG 674 (854)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999853 45688999999999999999999998 999999999999999888 79999999
Q ss_pred ccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..... +....
T Consensus 165 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~----i~~~~ 234 (321)
T 2a2a_A 165 LAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLAN----ITSVS 234 (321)
T ss_dssp TCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHH----HHTTC
T ss_pred cceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH----HHHHH----HHhcc
Confidence 998654432 223446999999999999999999999999999999999999999764421 11111 11111
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..++...... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 235 ~--~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 Y--DFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp C--CCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred c--ccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0111111112 2357899999999999999999999986
No 112
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=342.19 Aligned_cols=268 Identities=24% Similarity=0.362 Sum_probs=200.8
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhh--cCCCceeeEeeeeeec----C
Q 003046 522 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEE----G 595 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~g~~~~~----~ 595 (854)
+.....+.+.+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++.. ++||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 334456677899999999999999987 8999999986432 2334455555554 4899999999999887 7
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-----CCceeccCCCCCCeEEcCCCcEEE
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDIkp~NILl~~~~~~kL 670 (854)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 88999999999999999943 35889999999999999999999852 238999999999999999999999
Q ss_pred EEecccccccCCCcce---eecccccccccCccccccCcCCCc------chhhhHHHHHHHHHhC----------Ccccc
Q 003046 671 SDFGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQQLTDK------SDVYSFGVILLELISG----------QEAIS 731 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~s~~------sDVwS~Gvvl~elltG----------~~pf~ 731 (854)
+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||++| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999997654332221 124469999999999988766665 9999999999999999 55554
Q ss_pred cccccccccchHHHHHHhhhcCCcccccCCcccCcC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 732 NEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 732 ~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
....... .. ........... ..+.+.... .......+.+++.+|++.||++|||+.||+++|+.+..
T Consensus 264 ~~~~~~~--~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 264 DLVPSDP--SY-EDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTSCSSC--CH-HHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCCC--ch-hhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 3321111 11 11111111111 111111111 22566779999999999999999999999999998765
No 113
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=345.71 Aligned_cols=269 Identities=22% Similarity=0.289 Sum_probs=199.2
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-----cchhchHHHHHHhhhcC---CCceeeEeeeee
Q 003046 522 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-----QGKREFTNEVTLLSRIH---HRNLVQFLGYCQ 592 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-----~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~ 592 (854)
++....|.+.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++ ||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 334445667889999999999999975 689999999874321 12345778888887775 999999999998
Q ss_pred ecC-----eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc
Q 003046 593 EEG-----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 667 (854)
Q Consensus 593 ~~~-----~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 667 (854)
... ..++||||+. |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 765 5799999997 5999998643 233489999999999999999999998 9999999999999999999
Q ss_pred EEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH
Q 003046 668 AKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 668 ~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~ 747 (854)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.....
T Consensus 159 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 236 (308)
T 3g33_A 159 VKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236 (308)
T ss_dssp EEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999997654322 23445689999999999999999999999999999999999999976552222212211110
Q ss_pred HhhhcCCccccc---CCcccC-------cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 748 LHIESGDIQGII---DPSLLD-------EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~~~~~~~~i---d~~l~~-------~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. ......... ...+.. ....+....+.+++.+|++.||++|||+.|+++|
T Consensus 237 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 237 LP-PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CC-CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC-ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00 000000000 000000 0001123467899999999999999999999886
No 114
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.1e-38 Score=347.97 Aligned_cols=261 Identities=27% Similarity=0.428 Sum_probs=207.3
Q ss_pred HHHhhccccccCcEEEEEEEE------CCCcEEEEEEEecCCc-cchhchHHHHHHhhhc-CCCceeeEeeeeeecC-eE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG-RS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~-~~ 597 (854)
.+.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+ ..
T Consensus 28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 107 (316)
T 2xir_A 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 107 (316)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCce
Confidence 455678999999999999975 2468899999976532 2345788999999999 7999999999987754 58
Q ss_pred EEEEEecCCCCHHHhhcccccc------------cccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTH------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.+
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEK 184 (316)
T ss_dssp EEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCC
Confidence 9999999999999999653221 12388999999999999999999998 99999999999999999
Q ss_pred CcEEEEEecccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchH
Q 003046 666 MRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIV 743 (854)
Q Consensus 666 ~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~ 743 (854)
+.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||....... .+.
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~ 261 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFC 261 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH---HHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH---HHH
Confidence 99999999999865443322 2334568899999999999999999999999999999998 999997654221 111
Q ss_pred HHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 744 QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
. .+..+... ..... ....+.+++.+|++.+|++||++.||+++|+.++..
T Consensus 262 ~----~~~~~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 262 R----RLKEGTRM-----RAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp H----HHHHTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H----HhccCccC-----CCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 1 11111110 01111 123578999999999999999999999999998754
No 115
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=347.53 Aligned_cols=260 Identities=22% Similarity=0.298 Sum_probs=203.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee----cCeEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 601 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----~~~~~lV~ 601 (854)
.|.+.+.||+|+||.||+++.. +++.||||++..........+.+|++++++++||||+++++++.. ....++||
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 109 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence 3556789999999999999984 789999999876655566788999999999999999999999863 34789999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999976544566789999999999999999999998 999999999999999999999999999875422
Q ss_pred CCcc--------eeecccccccccCccccccCc---CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 682 GASH--------VSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 682 ~~~~--------~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
.... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||........ .+......
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~-- 262 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--SVALAVQN-- 262 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--CHHHHHHC--
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--hhhHHhhc--
Confidence 1100 012234799999999987543 78999999999999999999999965321111 11111111
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.... ..... ....+.+++.+|++.+|++||++.||+++|+.+.
T Consensus 263 -~~~~------~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 263 -QLSI------PQSPR----HSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp -C--C------CCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred -cCCC------Ccccc----CCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 0000 00111 2245889999999999999999999999999763
No 116
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.6e-38 Score=336.04 Aligned_cols=252 Identities=22% Similarity=0.371 Sum_probs=198.5
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 4667899999999999999886 68899999987653 334577899999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---cCCCcEEEEEecccccccC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~~kL~DFGla~~~~~ 681 (854)
++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 99999999865544456789999999999999999999998 99999999999999 4568899999999976543
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. .......||+.|+|||.+. +.++.++|||||||++|||++|+.||...... .+...... ...... ..
T Consensus 180 ~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~----~~~~~~~~--~~~~~~--~~- 247 (285)
T 3is5_A 180 D--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE----EVQQKATY--KEPNYA--VE- 247 (285)
T ss_dssp ---------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH--CCCCCC--C--
T ss_pred c--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH----HHHhhhcc--CCcccc--cc-
Confidence 2 2233456899999999875 56889999999999999999999999765421 11111111 111000 00
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.||++|||+.||+++
T Consensus 248 --~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 --CRPL----TPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---CCC----CHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred --cCcC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 2357789999999999999999999875
No 117
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-37 Score=342.91 Aligned_cols=269 Identities=23% Similarity=0.379 Sum_probs=210.6
Q ss_pred cCHHHHHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhh--cCCCceeeEeeeeeecC
Q 003046 518 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 518 ~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~g~~~~~~ 595 (854)
+...+.....+.+.+.||+|+||.||+|+.. ++.||||++... ....+..|++++.. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3345555667778899999999999999985 899999998643 34567788888887 78999999999998776
Q ss_pred ----eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHH--------hCCCCceeccCCCCCCeEEc
Q 003046 596 ----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLD 663 (854)
Q Consensus 596 ----~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDIkp~NILl~ 663 (854)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 78999999999999999943 35889999999999999999999 66 999999999999999
Q ss_pred CCCcEEEEEecccccccCCCcc---eeecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhC--------
Q 003046 664 KHMRAKVSDFGLSKFAVDGASH---VSSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG-------- 726 (854)
Q Consensus 664 ~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwS~Gvvl~elltG-------- 726 (854)
.++.+||+|||+++........ ......||+.|+|||.+.+. .++.++|||||||++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999866544332 12345699999999999765 344689999999999999999
Q ss_pred --CcccccccccccccchHHHHHHhhhcCCcccccCCcccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 727 --QEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 727 --~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
+.||........ ....+.... .... ..+.+... ...+....+.+++.+|++.+|++||++.||+++|+.+
T Consensus 262 ~~~~p~~~~~~~~~--~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 262 DYQLPYYDLVPSDP--SVEEMRKVV-CEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CCCCTTTTTSCSSC--CHHHHHHHH-TTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCccccCcCcc--cHHHHHHHH-HHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 677755432111 122222221 1111 11222111 2345667899999999999999999999999999998
Q ss_pred HH
Q 003046 804 IV 805 (854)
Q Consensus 804 ~~ 805 (854)
..
T Consensus 335 ~~ 336 (342)
T 1b6c_B 335 SQ 336 (342)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 118
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-38 Score=365.55 Aligned_cols=246 Identities=23% Similarity=0.317 Sum_probs=192.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC---CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||++... .......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 229 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence 445789999999999999876 6899999999754 223345677899999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
+++|+|.+++. ....+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 230 ~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 230 ANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CSSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred CCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999884 34568899999999999999999998 7 9999999999999999999999999999754332
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+ .. ... .
T Consensus 303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i---~~-~~~------~ 367 (446)
T 4ejn_A 303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELI---LM-EEI------R 367 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH---HH-CCC------C
T ss_pred C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHH---Hh-CCC------C
Confidence 2 2234467999999999999999999999999999999999999999765421 111111 11 111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
+.... ...+.+++.+|++.||++|| ++.|+++|
T Consensus 368 ~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 FPRTL----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCccC----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 11112 24578999999999999999 99999986
No 119
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=352.89 Aligned_cols=248 Identities=23% Similarity=0.321 Sum_probs=200.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++|+.++||||+++++++...+..++||||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~ 96 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence 446789999999999999887 58899999997542 23345688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+.+|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 97 LLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 999999999853 45689999999999999999999998 9999999999999999999999999999865433
Q ss_pred cceeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 684 SHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ....+..... ....
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-~~~~~~~~~~----~~~~----- 237 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-SSKEIVHTFE----TTVV----- 237 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-CHHHHHHHHH----HCCC-----
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-cHHHHHHHHh----hccc-----
Confidence 22344579999999999974 45899999999999999999999999754421 1112222111 1110
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-ISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-m~eV~~~ 799 (854)
.++......+.+++.+|++.+|++||+ +.+|.+|
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 011112245889999999999999998 7777654
No 120
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.7e-38 Score=339.32 Aligned_cols=258 Identities=27% Similarity=0.399 Sum_probs=204.6
Q ss_pred Hhhc-cccccCcEEEEEEEEC---CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 529 MLEK-KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~-~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+ .||+|+||.||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e 97 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVME 97 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEE
Confidence 3445 8999999999999653 467899999975432 2256789999999999999999999999 5677899999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 98 MAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp CCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 9999999999953 34588999999999999999999998 9999999999999999999999999999866544
Q ss_pred Cccee--ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 683 ASHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 683 ~~~~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
..... ....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+... +..+...
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~----~~~~~~~--- 239 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVTAM----LEKGERM--- 239 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHH----HHTTCCC---
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHH----HHcCCCC---
Confidence 33222 22346789999999998889999999999999999999 99999765421 12221 1222111
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIEREAA 811 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~~~~~ 811 (854)
. .+......+.+++.+|++.+|++||++.||++.|+++........
T Consensus 240 --~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 240 --G----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp --C----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --C----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 1 111223468899999999999999999999999999987665443
No 121
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.9e-38 Score=336.80 Aligned_cols=261 Identities=22% Similarity=0.321 Sum_probs=204.3
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeee-eecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~-~~~~~~~lV~e~~ 604 (854)
.|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+|+++++.++|++++..++++ ...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 4566789999999999999874 68899999876443 235688999999999988777666655 6677889999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---cCCCcEEEEEecccccccC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~~kL~DFGla~~~~~ 681 (854)
+++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 88 -~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 88 -GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp -CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred -CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999998532 34689999999999999999999998 99999999999999 7889999999999986654
Q ss_pred CCcc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 682 GASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 682 ~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+........... .
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-h
Confidence 3321 22345699999999999999999999999999999999999999987553332222222222211110 0
Q ss_pred ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 756 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 756 ~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+.+...+ ...+.+++.+|++.+|++||++.+|++.|+++...
T Consensus 240 -----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 240 -----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp -----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0001111 24688999999999999999999999999998653
No 122
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=350.94 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=186.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 445789999999999999987 57899999997543 345688999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEEEEecccccccCCC
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL~DFGla~~~~~~~ 683 (854)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 133 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 133 GELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 999999843 45688999999999999999999998 9999999999999975 889999999999865432
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+.. .+...... .. ...
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~----~i~~~~~~-~~-~~~ 274 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFR----RILNCEYY-FI-SPW 274 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---HHHH----HHHTTCCC-CC-TTT
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---HHHH----HHHhCCCc-cC-Cch
Confidence 22234569999999999999999999999999999999999999997544111 1111 11111110 00 111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.||++|||+.|++++
T Consensus 275 ~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDE----VSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhh----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112 22457899999999999999999999875
No 123
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=349.59 Aligned_cols=255 Identities=24% Similarity=0.374 Sum_probs=197.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcE----EEEEEEecC-CccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~----vAvK~l~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
+.+.+.||+|+||.||+|++. +++. ||+|.+... .......+.+|+.++++++||||+++++++.... .++|+
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEE
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEE
Confidence 445789999999999999875 3443 577777543 3344677899999999999999999999998765 78999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 ~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 96 QLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp CCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999998642 34688999999999999999999998 999999999999999999999999999986543
Q ss_pred CCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 682 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 682 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.... ..+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~----~~~~~~--- 238 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSIL----EKGERL--- 238 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHH----HTTCCC---
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHHHH----HcCCCC---
Confidence 3222 2233457889999999999999999999999999999999 99999765422 222211 111100
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+......+.+++.+|++.+|++||++.|+++.|+.+...
T Consensus 239 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 ------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 01111223578999999999999999999999999998654
No 124
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=348.59 Aligned_cols=255 Identities=25% Similarity=0.429 Sum_probs=199.1
Q ss_pred HhhccccccCcEEEEEEEECC-----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~-----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.+.||+|+||.||+|.... +..||||+++... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 126 (333)
T 1mqb_A 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE 126 (333)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEe
Confidence 345789999999999998753 2359999997543 2334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 127 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 127 YMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999853 235688999999999999999999998 9999999999999999999999999999865433
Q ss_pred Ccc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 683 ASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 683 ~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+... +..+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~~~----~~~~~~~--- 269 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH----EVMKA----INDGFRL--- 269 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----HHTTCCC---
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH----HHHHH----HHCCCcC---
Confidence 221 1222346789999999999999999999999999999999 99999754421 12111 1111100
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+......+.+++.+|++.+|++||++.||+++|++++..
T Consensus 270 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 ------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01112234588999999999999999999999999998753
No 125
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-37 Score=339.10 Aligned_cols=257 Identities=17% Similarity=0.273 Sum_probs=196.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|... +++.||||++...... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRL 115 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEe
Confidence 455789999999999999986 6889999998754322 236788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 116 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 116 INGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999999853 34688999999999999999999998 99999999999999999999999999997655433
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC-cccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD-IQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~-~~~~id~~ 762 (854)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .+ ........ .....
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~----~~~~~~~~~~~~~~--- 257 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS----VM----GAHINQAIPRPSTV--- 257 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH----HH----HHHHHSCCCCGGGT---
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH----HH----HHHhccCCCCcccc---
Confidence 33334456899999999999999999999999999999999999999765411 11 11111111 00011
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIVIE 807 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~~~~~~ 807 (854)
... ....+.+++.+|++.+|++|| +++++++.|+..+...
T Consensus 258 -~~~----~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 258 -RPG----IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -STT----CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -CCC----CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 111 223578899999999999999 9999999999876543
No 126
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.5e-39 Score=375.28 Aligned_cols=253 Identities=25% Similarity=0.425 Sum_probs=206.3
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.+.++||+|+||.||+|+++++..||||+++... ...+.|.+|+++|++++||||+++++++.. +..++||||+++|
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g 346 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG 346 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence 45678999999999999999988899999997544 335679999999999999999999999976 6789999999999
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 687 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 687 (854)
+|.+++... ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 347 sL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 347 SLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp EHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred cHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 999999532 234588999999999999999999998 999999999999999999999999999986543222222
Q ss_pred ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 688 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 688 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
....++..|+|||.+....++.++|||||||++|||++ |+.||.+.... .+... +..+... .
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~----~~~~~----i~~~~~~---------~ 484 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQ----VERGYRM---------P 484 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH----HHHHH----HHTTCCC---------C
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHcCCCC---------C
Confidence 33457789999999999999999999999999999999 99999765421 12221 1222110 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
.+......+.+++.+|++.+|++||++.+|++.|+.+.
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11122346889999999999999999999999999864
No 127
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=350.61 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=186.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeee--------ecCe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQ--------EEGR 596 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~--------~~~~ 596 (854)
.+.+.+.||+|+||.||+|++. +++.||||++........+.+.+|+.++.++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 3456789999999999999976 68999999987666666678899999999996 999999999984 3445
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eeccCCCCCCeEEcCCCcEEEEEec
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~~~~~~kL~DFG 674 (854)
.++||||+. |+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred EEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence 799999996 79999885432 344689999999999999999999998 7 9999999999999999999999999
Q ss_pred ccccccCCCcce-----------eecccccccccCcccc---ccCcCCCcchhhhHHHHHHHHHhCCccccccccccccc
Q 003046 675 LSKFAVDGASHV-----------SSIVRGTVGYLDPEYY---ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 740 (854)
Q Consensus 675 la~~~~~~~~~~-----------~~~~~gt~~Y~aPE~~---~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~ 740 (854)
+++......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---- 259 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---- 259 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence 998654332211 1134589999999998 5667889999999999999999999999754311
Q ss_pred chHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 741 NIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 741 ~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.+.. +.... ..... ....+.+++.+|++.+|++||++.|++++|+.+..
T Consensus 260 ~~~~--------~~~~~----~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 RIVN--------GKYSI----PPHDT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp --------------CCC----CTTCC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhhc--------CcccC----Ccccc----cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1100 00000 00011 11236789999999999999999999999998764
No 128
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.7e-38 Score=353.33 Aligned_cols=271 Identities=18% Similarity=0.253 Sum_probs=202.7
Q ss_pred HHhhcccccc--CcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSG--GFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G--~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
|.+.+.||+| +||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence 4567899999 99999999987 68999999997543 2234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+......
T Consensus 107 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 107 FMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp CCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred ccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999998643 234588999999999999999999998 9999999999999999999999999998643221
Q ss_pred Cc------ceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh-h--
Q 003046 683 AS------HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI-E-- 751 (854)
Q Consensus 683 ~~------~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~-~-- 751 (854)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.................. .
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 11 11223468999999999987 6799999999999999999999999976542221111110000000 0
Q ss_pred ----------------cCCcccccCCcc---------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHH
Q 003046 752 ----------------SGDIQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDA 803 (854)
Q Consensus 752 ----------------~~~~~~~id~~l---------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~~ 803 (854)
.....+.+.... ...........+.+++.+|++.||++|||+.|+++| ++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 000000000000 000111223468899999999999999999999987 5544
No 129
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=352.01 Aligned_cols=253 Identities=25% Similarity=0.318 Sum_probs=201.7
Q ss_pred HHhhccccccCcEEEEEEEE----CCCcEEEEEEEecCC----ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~ 598 (854)
+.+.+.||+|+||.||+|+. .+++.||||+++... ......+.+|+++++++ +||||+++++++...+..+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 135 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH 135 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence 45678999999999999987 368999999986532 22345677899999999 6999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 136 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 99999999999999853 34688999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCcceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.. ......
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~~--- 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR---RILKSE--- 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH---HHHHCC---
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH---HHhccC---
Confidence 54433334445679999999999986 3578999999999999999999999975442222222222 111111
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKDIQ 801 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~L~ 801 (854)
+..... ....+.+++.+|++.||++|| ++.|++++.-
T Consensus 283 ----~~~~~~----~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 283 ----PPYPQE----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp ----CCCCTT----SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred ----CCCCcc----cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 111111 223578999999999999999 9999998753
No 130
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.9e-38 Score=357.30 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=193.7
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcC--CCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|...+++.||||++.... ......+.+|+++|++++ ||||+++++++...+..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 45678999999999999998889999999997543 233467899999999996 5999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+.+++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 137 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 678899999853 34678889999999999999999998 999999999999995 5899999999998664432
Q ss_pred cc-eeecccccccccCcccccc-----------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 684 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 684 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~~~~~ 282 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAIID 282 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh------HHHHHHHHHhC
Confidence 22 2344579999999999865 368889999999999999999999996532 11111111111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.....++......+.+++.+|++.||++||++.||+++
T Consensus 283 ---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 283 ---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111111111112357899999999999999999999986
No 131
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-37 Score=333.71 Aligned_cols=250 Identities=28% Similarity=0.438 Sum_probs=204.7
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee--------
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-------- 593 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-------- 593 (854)
.....+.+.+.||+|+||.||+|+.. +++.||||++... ...+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 34445666789999999999999987 7899999998754 2467899999999999999999998854
Q ss_pred --------cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC
Q 003046 594 --------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 594 --------~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~ 665 (854)
....++||||+++|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 45579999999999999999643 235688999999999999999999998 99999999999999999
Q ss_pred CcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH
Q 003046 666 MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW 745 (854)
Q Consensus 666 ~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~ 745 (854)
+.+||+|||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|..|+.... ...
T Consensus 159 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~~-- 228 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------KFF-- 228 (284)
T ss_dssp TEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------HHH--
T ss_pred CCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------HHH--
Confidence 999999999998654432 2233468999999999999999999999999999999999998875322 111
Q ss_pred HHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 746 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 746 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.....+.+. ..++ ..+.+++.+|++.+|++||++.|++++|+.+..
T Consensus 229 --~~~~~~~~~--------~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 229 --TDLRDGIIS--------DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp --HHHHTTCCC--------TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred --HHhhccccc--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 111222211 1222 346789999999999999999999999998754
No 132
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=342.33 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=195.6
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD 85 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCC
Confidence 45688999999999999987 589999999865432 224567899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~l~~~~~----~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 86 HTVLHELDR----YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp EEHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CchHHHHHh----hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 999988874 245588999999999999999999998 999999999999999999999999999986543322
Q ss_pred eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-------HHhhhcCCc-c
Q 003046 686 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KLHIESGDI-Q 756 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-------~~~~~~~~~-~ 756 (854)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+.... ......... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 2234468999999999976 678999999999999999999999997654221111111100 000000000 0
Q ss_pred --cccCCcccCc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 --GIIDPSLLDE---YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 --~~id~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.++.-... ........+.+++.+|++.||++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0001000000 001123457899999999999999999999987
No 133
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-38 Score=341.65 Aligned_cols=261 Identities=32% Similarity=0.546 Sum_probs=194.1
Q ss_pred HHHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 523 IEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 523 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
+....+.+.++||+|+||.||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++. ....++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEE
Confidence 33444566789999999999999865 469999997543 233467899999999999999999999764 4568999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++++|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 999999999999853 245688999999999999999999998 99999999999999999999999999997544
Q ss_pred CCC-cceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 681 DGA-SHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 681 ~~~-~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||...... ..+... ...+...
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~----~~~~~~~ 244 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEM----VGRGSLS 244 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHH----HHHTSCC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHH----hcccccC
Confidence 321 22233456999999999986 567888999999999999999999999764411 112221 1222211
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 804 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~ 804 (854)
..+. .+.. .....+.+++.+|++.+|++||++.||++.|+++.
T Consensus 245 ~~~~-~~~~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 245 PDLS-KVRS----NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCTT-SSCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cchh-hccc----cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1111 1111 22346889999999999999999999999999864
No 134
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=373.60 Aligned_cols=250 Identities=26% Similarity=0.420 Sum_probs=200.1
Q ss_pred cccccCcEEEEEEEEC---CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 533 KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
.||+|+||.||+|.++ ++..||||+++... ....+.+.+|+++|++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 45679999997653 3345779999999999999999999999976 56899999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCccee-
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS- 687 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~- 687 (854)
|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 9999953 245689999999999999999999998 999999999999999999999999999986543322221
Q ss_pred -ecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 688 -SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 688 -~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+... +..+...
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~~~----i~~~~~~--------- 558 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAF----IEQGKRM--------- 558 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----HHHHH----HHTTCCC---------
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHHH----HHcCCCC---------
Confidence 22345789999999999999999999999999999998 99999865522 22221 2222111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+......+.+++.+|++.+|++||++.+|++.|+.+...
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11122334688999999999999999999999999987643
No 135
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2e-37 Score=334.54 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=203.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeee-eecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~-~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+|+.+++.++|++++..+.++ ...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 345688999999999999974 78999999987543 235688999999999988876666655 5667789999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---cCCCcEEEEEecccccccCC
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~~kL~DFGla~~~~~~ 682 (854)
+++|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 8999999853 234689999999999999999999998 99999999999999 48899999999999866544
Q ss_pred Ccc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 683 ASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 683 ~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+........... .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-h-
Confidence 321 12345699999999999999999999999999999999999999986543222222222211111110 0
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+.+...+ ...+.+++.+|++.+|++||++.+|++.|+++...
T Consensus 240 ----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 240 ----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp ----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----HHHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 0011112 24588999999999999999999999999988653
No 136
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.1e-38 Score=347.82 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=192.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCe----EEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR----SVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~----~~l 599 (854)
|.+.+.||+|+||.||+|+.. +++.||||+++..... ....+.+|++++++++||||+++++++..... .++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 456789999999999999974 6889999999765322 23468899999999999999999999876543 499
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 9999999999999853 34688999999999999999999998 9999999999999999999999999999765
Q ss_pred cCCCcc--eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 680 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 680 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~ 239 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIPP 239 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCCH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCCc
Confidence 433221 223356899999999999999999999999999999999999999765411 11111111111100
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-HHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLK-DIQDA 803 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~-~L~~~ 803 (854)
...... ....+.+++.+|++.||++||++.++++ .|...
T Consensus 240 ---~~~~~~----~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 240 ---SARHEG----LSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ---HHHSTT----CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ---ccccCC----CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 000111 2235789999999999999997666554 45443
No 137
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=344.99 Aligned_cols=241 Identities=24% Similarity=0.352 Sum_probs=199.3
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--------chhchHHHHHHhhhcCCCceeeEeeeeeecCe
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~ 596 (854)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 34556789999999999999875 6889999999765321 23467889999999999999999999999999
Q ss_pred EEEEEEecCCC-CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 597 SVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 597 ~~lV~e~~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
.++||||+.+| +|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~lv~e~~~~g~~l~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEECCTTSCBHHHHHH----TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 99999999777 9999884 344689999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... . .. .
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~-------~~-~- 239 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------T-------VE-A- 239 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G-------TT-T-
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------H-------Hh-h-
Confidence 986654322 233569999999999988776 7899999999999999999999965321 0 00 0
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+ ... ....+.+++.+|++.+|++|||+.|++++
T Consensus 240 ---~~~~--~~~----~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 ---AIHP--PYL----VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---CCCC--SSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---ccCC--Ccc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 011 12357899999999999999999999997
No 138
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.7e-38 Score=375.85 Aligned_cols=249 Identities=27% Similarity=0.416 Sum_probs=199.0
Q ss_pred ccccccCcEEEEEEEEC---CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 532 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|+++|++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999663 467899999976432 335679999999999999999999999964 568899999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc-
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH- 685 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~- 685 (854)
|+|.+++. ....+++..++.|+.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++........
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999994 345688999999999999999999998 9999999999999999999999999999866543322
Q ss_pred -eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 686 -VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 686 -~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.... .+.. .+..+...
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~~----~i~~~~~~------- 591 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVTA----MLEKGERM------- 591 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHH----HHHTTCCC-------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH----HHHcCCCC-------
Confidence 2233457889999999999999999999999999999998 99999765521 1111 22222111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+......+.+++..|++.+|++||++.+|++.|+++..
T Consensus 592 --~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 592 --GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1111223468899999999999999999999999998754
No 139
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=9.5e-38 Score=335.22 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=200.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++..++..++||||+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 87 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence 345688999999999999886 58899999997543 223456889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc---EEEEEecccccccC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---~kL~DFGla~~~~~ 681 (854)
++++|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 88 ~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 88 TGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999988843 45688999999999999999999998 9999999999999987655 99999999976543
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .+... +..+.... ..+
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~----~~~~~~~~-~~~ 229 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQ----IKAGAYDY-PSP 229 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCCC-CTT
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh----HHHHH----HHhccccC-Cch
Confidence 322 23356999999999999999999999999999999999999999764421 11111 11111100 000
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 230 -~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 -EWDTV----TPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TTTTS----CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -hhccc----CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 01112 2357899999999999999999999886
No 140
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.5e-38 Score=337.31 Aligned_cols=244 Identities=23% Similarity=0.393 Sum_probs=177.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 345678999999999999875 68999999997543 22345788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 95 A-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp C-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred c-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9 6788887743 35688999999999999999999998 99999999999999999999999999997654332
Q ss_pred cceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....... +.. .+..+.. .
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~----~~~~~~~------~ 230 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFK----NISNGVY------T 230 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH----HHHHTCC------C
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH----HHH----HHHhCCC------C
Confidence 2233468999999999987765 689999999999999999999997654211 111 1111111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.... ...+.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~~~----~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 LPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCccC----CHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 11112 2357899999999999999999999875
No 141
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4e-38 Score=345.85 Aligned_cols=256 Identities=27% Similarity=0.443 Sum_probs=201.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcE--EEEEEEecC-CccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKE--IAVKVLTSN-SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~--vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.. ++.. ||||++... .....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 106 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 106 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEe
Confidence 446789999999999999876 4554 499988753 233456789999999999 89999999999999999999999
Q ss_pred ecCCCCHHHhhcccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEE
Q 003046 603 FMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 670 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL 670 (854)
|+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEE
Confidence 999999999996532 2234689999999999999999999998 9999999999999999999999
Q ss_pred EEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHh
Q 003046 671 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 671 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
+|||+++..... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+. ..
T Consensus 184 ~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~----~~ 253 (327)
T 1fvr_A 184 ADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELY----EK 253 (327)
T ss_dssp CCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHH----HH
T ss_pred cccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH----HHH----HH
Confidence 999998743211 11223457889999999998889999999999999999998 99999765421 111 11
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
+..+.. ... +......+.+++.+|++.+|++||++.|++++|+.++.
T Consensus 254 ~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 254 LPQGYR-----LEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp GGGTCC-----CCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCC-----CCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111110 011 11122458899999999999999999999999998865
No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4.9e-38 Score=336.87 Aligned_cols=244 Identities=25% Similarity=0.405 Sum_probs=197.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 345688999999999999877 57789999986532 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 91 APLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 999999999843 35688999999999999999999998 9999999999999999999999999998644322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ ... .+..... .+
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~----~~~~~~~------~~ 226 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE----TYK----RISRVEF------TF 226 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH----HHHHTCC------CC
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH----HHH----HHHhCCC------CC
Confidence 2234468999999999999999999999999999999999999997654211 111 1111110 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ....+.+++.+|++.+|++||++.||++|
T Consensus 227 ~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 PDF----VTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CTT----SCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCc----CCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111 22357799999999999999999999987
No 143
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.2e-38 Score=345.77 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=199.1
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEe
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
..|.+.+.||+|+||.||+|..+ +++.||||++.... ....+|++++.++ +||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 34566789999999999999987 68899999997543 3456788998888 799999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC----CcEEEEEecccccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKFA 679 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~----~~~kL~DFGla~~~ 679 (854)
+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||+..+ +.+||+|||+++..
T Consensus 98 ~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 98 MKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999998853 45689999999999999999999998 99999999999998543 35999999999865
Q ss_pred cCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....+.. .+..+... +
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~----~i~~~~~~--~ 242 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILA----RIGSGKFS--L 242 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-SCHHHHHH----HHHHCCCC--C
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-CCHHHHHH----HHccCCcc--c
Confidence 44322 23345689999999999988899999999999999999999999975331 11112222 12222211 1
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....... ....+.+++.+|++.||++||++.|+++|
T Consensus 243 ~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 SGGYWNS----VSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CSTTTTT----SCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred Ccccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111112 22457899999999999999999999876
No 144
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-38 Score=352.58 Aligned_cols=254 Identities=30% Similarity=0.488 Sum_probs=192.5
Q ss_pred HhhccccccCcEEEEEEEEC--CC--cEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeee-cCeEEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK--DG--KEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-EGRSVLVYE 602 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~--~~--~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~lV~e 602 (854)
.+.+.||+|+||.||+|++. ++ ..||||+++... ....+.+.+|+.++++++||||++++++|.. ++..++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 34578999999999999864 22 368999886543 3345678999999999999999999998754 567899999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 172 ~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 172 YMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999953 234578899999999999999999998 9999999999999999999999999999865432
Q ss_pred Ccc---eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 683 ASH---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 683 ~~~---~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.... ..+.. .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~~~----~~~~~--~ 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYL----LQGRR--L 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHHHH----HTTCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHHHH----HcCCC--C
Confidence 211 1233457889999999999999999999999999999999 67777654422 222221 11111 0
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+ ......+.+++.+|++.+|++||++.||+++|++++.
T Consensus 316 ~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 316 LQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 1122358899999999999999999999999998865
No 145
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.1e-38 Score=344.11 Aligned_cols=261 Identities=21% Similarity=0.286 Sum_probs=202.8
Q ss_pred cCHHHHHHHHHHhh-ccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhc-CCCceeeEeeeee
Q 003046 518 FTLSDIEDATKMLE-KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQ 592 (854)
Q Consensus 518 ~~~~~i~~~~~~~~-~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~ 592 (854)
+...+.....|.+. +.||+|+||.||+|... +++.||||++.... ......+.+|+.+++++ +||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33344444555554 88999999999999887 68999999987542 23356788999999999 5699999999999
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEE
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAK 669 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~k 669 (854)
..+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+|
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 999999999999999999988532 245689999999999999999999998 9999999999999998 78999
Q ss_pred EEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh
Q 003046 670 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 670 L~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .......
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~ 248 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET----YLNISQV 248 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHT
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH----HHHHHhc
Confidence 99999998654322 22335699999999999999999999999999999999999999976542111 1111100
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...... .....+.+++.+|++.+|++|||+.|++++
T Consensus 249 --~~~~----~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 249 --NVDY----SEETFS----SVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --CCCC----CTTTTT----TSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --cccc----Cchhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0000 011111 123457899999999999999999999886
No 146
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.9e-38 Score=344.91 Aligned_cols=269 Identities=23% Similarity=0.375 Sum_probs=195.0
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchH--HHHHHhhhcCCCceeeEeeeeee-----cCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFT--NEVTLLSRIHHRNLVQFLGYCQE-----EGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~--~E~~~l~~l~HpnIv~l~g~~~~-----~~~~~lV 600 (854)
+.+.+.||+|+||.||+|+. +++.||||++.... ...+. .|+..+..++||||+++++++.. ....++|
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 15 LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 34568999999999999987 48999999987432 23333 44444556899999999986532 3357899
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC------CCceeccCCCCCCeEEcCCCcEEEEEec
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------VPAIIHRDLKSSNILLDKHMRAKVSDFG 674 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDIkp~NILl~~~~~~kL~DFG 674 (854)
|||+++|+|.+++.. ...++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 91 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp ECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 999999999999943 34578889999999999999999863 2389999999999999999999999999
Q ss_pred ccccccCCC-------cceeecccccccccCcccccc-------CcCCCcchhhhHHHHHHHHHhCCccccccccccccc
Q 003046 675 LSKFAVDGA-------SHVSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 740 (854)
Q Consensus 675 la~~~~~~~-------~~~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~ 740 (854)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998654321 112234469999999999986 466789999999999999999987764332111111
Q ss_pred chH----------HHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 741 NIV----------QWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 741 ~l~----------~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
... ...............+.... .........+.+++.+|++.||++|||+.||++.|++++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 111 01111111111111111111 112235567999999999999999999999999999987643
No 147
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.9e-38 Score=339.43 Aligned_cols=255 Identities=30% Similarity=0.492 Sum_probs=198.5
Q ss_pred HHhhccccccCcEEEEEEEECC----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeee-ecCeEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-~~~~~~lV~ 601 (854)
+.+.+.||+|+||.||+|++.+ ...||+|++.... ......+.+|+.++++++||||+++++++. .++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 3456889999999999998653 2358999987543 233467889999999999999999999864 456789999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 107 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 107 PYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp ECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred eCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999953 245678899999999999999999998 999999999999999999999999999976543
Q ss_pred CCc---ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 682 GAS---HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 682 ~~~---~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
... .......||+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+..... .+..
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~~~~~----~~~~-- 250 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYLL----QGRR-- 250 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----THHHHHH----TTCC--
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HHHHHHh----cCCC--
Confidence 221 12233457889999999999999999999999999999999 55666544321 1211111 1110
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
...+ .. ....+.+++.+|++.+|++||++.|+++.|++++.
T Consensus 251 ~~~~---~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 251 LLQP---EY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp CCCC---TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC---cc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0001 11 12358899999999999999999999999999865
No 148
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.6e-38 Score=352.42 Aligned_cols=242 Identities=26% Similarity=0.328 Sum_probs=189.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHH-hhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~-l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++.... .....+..|..+ ++.++||||+++++++...+..++|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 456789999999999999987 578999999976532 223445667766 577899999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 120 YINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999843 45678889999999999999999998 9999999999999999999999999999854332
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+. .+.. .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--------~~~~------~ 257 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL--------NKPL------Q 257 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH--------HSCC------C
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--------hccc------C
Confidence 2 23345679999999999999999999999999999999999999997654222111111 1111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISE 795 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e 795 (854)
+....+ ..+.+++.+|++.||++||++.+
T Consensus 258 ~~~~~~----~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 258 LKPNIT----NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CCSSSC----HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCCCC----HHHHHHHHHHcccCHHhCCCCCC
Confidence 111222 35788999999999999999853
No 149
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9.3e-38 Score=339.18 Aligned_cols=250 Identities=24% Similarity=0.407 Sum_probs=200.7
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
..+.+.+.||+|+||.||+|+.. +++.||||++..........+.+|+.++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 35566789999999999999986 68999999998655445567889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---cCCCcEEEEEecccccccC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~~kL~DFGla~~~~~ 681 (854)
++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 89 ~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 89 SGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999998843 34688999999999999999999998 99999999999999 7889999999999875432
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.. .+..+... ...
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~----~i~~~~~~--~~~ 228 (304)
T 2jam_A 162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES----KLFE----KIKEGYYE--FES 228 (304)
T ss_dssp B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH----HHHHCCCC--CCT
T ss_pred C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHH----HHHcCCCC--CCc
Confidence 2 223346899999999999999999999999999999999999999764411 1111 11112110 111
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...... ...+.+++.+|++.||++||++.|++++
T Consensus 229 ~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 PFWDDI----SESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTTS----CHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccC----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111122 2457899999999999999999999875
No 150
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=344.74 Aligned_cols=251 Identities=18% Similarity=0.165 Sum_probs=202.3
Q ss_pred HHhhccccccCcEEEEEEE------ECCCcEEEEEEEecCCccchhchHHHHHHhhhcC---CCceeeEeeeeeecCeEE
Q 003046 528 KMLEKKIGSGGFGVVYYGK------LKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~------~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~~~ 598 (854)
+.+.+.||+|+||+||+|. ..+++.||||+++.. ...++..|++++.+++ |+||+++++++...+..+
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence 4456889999999999994 346889999998754 3456778888888776 999999999999999999
Q ss_pred EEEEecCCCCHHHhhccccc-ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-----------CC
Q 003046 599 LVYEFMHNGTLKEHLYGTLT-HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----------HM 666 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-----------~~ 666 (854)
+||||+++|+|.+++..... ....+++..++.|+.||+.||+|||+. +|+||||||+|||++. ++
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999964322 345699999999999999999999998 9999999999999998 89
Q ss_pred cEEEEEecccccccC-CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH
Q 003046 667 RAKVSDFGLSKFAVD-GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW 745 (854)
Q Consensus 667 ~~kL~DFGla~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~ 745 (854)
.+||+|||+|+.... ..........||++|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------- 293 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------- 293 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-------
Confidence 999999999975432 223344556799999999999999999999999999999999999999965431110
Q ss_pred HHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHHHHHH
Q 003046 746 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR-PSISEVLKDIQDAIVI 806 (854)
Q Consensus 746 ~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Psm~eV~~~L~~~~~~ 806 (854)
.++..+..... ...+.+++..|++.+|.+| |++.++.+.|++.+..
T Consensus 294 ------------~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 ------------KPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ------------EECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ------------eechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 01111111111 2346688889999999988 6889999999987754
No 151
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.8e-38 Score=335.28 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=200.2
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..+.+.+.||+|+||.||+|+.. +++.||||+++..... ....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 34566789999999999999987 6899999998754321 2467899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC----cEEEEEec
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 674 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~----~~kL~DFG 674 (854)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999843 45688999999999999999999998 999999999999999877 89999999
Q ss_pred ccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..... +....
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~----~~~~~ 227 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ----ETLTN----ISAVN 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHH----HHTTC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH----HHHHH----hHhcc
Confidence 997654322 223346899999999999999999999999999999999999999765411 11111 11111
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..++..... ....+.+++.+|++.+|++||++.|++++
T Consensus 228 ~--~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 Y--DFDEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C--CCCHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred c--CCcchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 001111111 12357899999999999999999999986
No 152
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-37 Score=339.89 Aligned_cols=256 Identities=23% Similarity=0.322 Sum_probs=195.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
++.||+|+||.||+|+.. +++.||||++..........+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 367999999999999865 6899999999876555567789999999985 79999999999999999999999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc---EEEEEecccccccCCC--
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVDGA-- 683 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---~kL~DFGla~~~~~~~-- 683 (854)
|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 98 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 98 ILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999853 35688999999999999999999998 9999999999999998776 9999999987543211
Q ss_pred ----cceeecccccccccCcccccc-----CcCCCcchhhhHHHHHHHHHhCCcccccccccccc-------cchHHHHH
Q 003046 684 ----SHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-------RNIVQWAK 747 (854)
Q Consensus 684 ----~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~-------~~l~~~~~ 747 (854)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||......+.. ........
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 111223459999999999875 56889999999999999999999999765421100 00001111
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+..+... +....... ....+.+++.+|++.||++|||+.|+++|
T Consensus 251 ~~i~~~~~~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKYE--FPDKDWAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCcc--cCchhccc----CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111122110 00000011 12458899999999999999999999986
No 153
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.4e-39 Score=350.70 Aligned_cols=258 Identities=23% Similarity=0.399 Sum_probs=185.9
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhh--cCCCceeeEeeeeeecC----eEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG----RSVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~g~~~~~~----~~~lV~ 601 (854)
+.+.+.||+|+||.||+|++. ++.||||++... ....+..|.+++.. ++||||+++++++.... ..++||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 446789999999999999876 899999998643 34566778888877 79999999999998876 789999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHH--------hCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 81 e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp ECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred eccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999942 35788889999999999999999 66 9999999999999999999999999
Q ss_pred cccccccCCCcce---eecccccccccCccccccC------cCCCcchhhhHHHHHHHHHhC----------Cccccccc
Q 003046 674 GLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEK 734 (854)
Q Consensus 674 Gla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwS~Gvvl~elltG----------~~pf~~~~ 734 (854)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997655433321 2334699999999999776 445689999999999999999 55554332
Q ss_pred ccc-cccchHHHHHHhhhcCCcccccCCcccCc-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 735 FGA-NCRNIVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 735 ~~~-~~~~l~~~~~~~~~~~~~~~~id~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
... ....+... ..... ..+.+... ...+....+.+++.+|++.||++|||+.||++.|+.+..
T Consensus 233 ~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 233 PSDPSVEEMRKV----VCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp C-CCCCC-CHHH----HTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCCccHHHHHHH----HHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 111 11111111 11111 11111111 123566789999999999999999999999999998754
No 154
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-38 Score=361.44 Aligned_cols=245 Identities=24% Similarity=0.409 Sum_probs=201.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|++. +|+.||||++..... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 446789999999999999987 799999999975422 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 98 VSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999984 345689999999999999999999998 99999999999999999999999999998664432
Q ss_pred cceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+.. .+..+...
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~----~i~~~~~~------ 234 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----TLFK----KICDGIFY------ 234 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----HHHH----HHHTTCCC------
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----HHHH----HHhcCCcC------
Confidence 2334569999999999988765 67999999999999999999999765422 1111 11112110
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+.+++.+|++.||++|||+.||++|
T Consensus 235 ~p~~~----s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 TPQYL----NPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCTTC----CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCccC----CHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 01111 2357899999999999999999999985
No 155
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.4e-37 Score=348.22 Aligned_cols=246 Identities=22% Similarity=0.259 Sum_probs=188.9
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhh-cCCCceeeEeeeeee----cCeEEEEEEecC
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSR-IHHRNLVQFLGYCQE----EGRSVLVYEFMH 605 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~----~~~~~lV~e~~~ 605 (854)
+.||+|+||+||+|... +++.||||++.. ...+.+|++++.+ .+||||+++++++.. .+..++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999886 688999999863 2456788888754 589999999999875 567899999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEEEEecccccccCC
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL~DFGla~~~~~~ 682 (854)
+|+|.+++... ....+++..+..|+.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 143 gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 143 GGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp SEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999999642 234689999999999999999999998 9999999999999998 789999999999865432
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+. .+... +...
T Consensus 218 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~~--~~~~ 289 (400)
T 1nxk_A 218 --NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQYE--FPNP 289 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCCC--CCTT
T ss_pred --CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCccc--CCCc
Confidence 222345689999999999999999999999999999999999999976542222212222211 11110 0000
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+.+++.+|++.||++|||+.||++|
T Consensus 290 ~~~~~----s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSEV----SEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01112 2457899999999999999999999987
No 156
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.1e-38 Score=334.43 Aligned_cols=247 Identities=23% Similarity=0.364 Sum_probs=179.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 345688999999999999875 689999999975421 2235688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 93 CHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred CCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999998532 35688999999999999999999998 99999999999999999999999999997654322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+ ... +..+
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~------~~~~ 231 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV--------VLA------DYEM 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C--------CSS------CCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH--------hhc------ccCC
Confidence 2 223356899999999999989999999999999999999999999765422111000 000 0111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++||++.|++++
T Consensus 232 ~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 PSFL----SIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccc----CHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1112 2357899999999999999999999875
No 157
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-38 Score=337.70 Aligned_cols=254 Identities=24% Similarity=0.366 Sum_probs=199.7
Q ss_pred hccccccCcEEEEEEEECC----CcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeE-EEEEEec
Q 003046 531 EKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS-VLVYEFM 604 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~-~lV~e~~ 604 (854)
.+.||+|+||+||+|.+.+ +..||+|++..... ...+.+.+|+.++++++||||+++++++...+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 4789999999999998642 23799999875432 3356788999999999999999999999776655 9999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC-
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA- 683 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~- 683 (854)
.+|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 106 CHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp TTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred cCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 99999999954 245678999999999999999999998 99999999999999999999999999997553321
Q ss_pred --cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 684 --SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 684 --~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
........+|+.|+|||.+.+..++.++|||||||++|||++|..|+...... ..+...... +...
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~---~~~~~~~~~----~~~~----- 247 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP---FDLTHFLAQ----GRRL----- 247 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG---GGHHHHHHT----TCCC-----
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH---HHHHHHhhc----CCCC-----
Confidence 11223345889999999999999999999999999999999965554322211 122222111 1100
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
. .+......+.+++.+|++.+|++|||+.|+++.|++++..
T Consensus 248 ~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 248 P----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0111223588999999999999999999999999998653
No 158
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5e-38 Score=348.42 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=196.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 445678999999999999874 6899999999754322 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+. |+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 136 CL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp CS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred CC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 97 688887743 245688999999999999999999998 9999999999999999999999999999765332
Q ss_pred cceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 684 SHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .......... .....
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-------~~~~~~~~~~-~~~~~- 274 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNE-SPALQ- 274 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC-CCCCC-
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHHhcC-CCCCC-
Confidence 2346999999999985 567899999999999999999999999754411 1111111111 11111
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++|||+.|++++
T Consensus 275 ---~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 ---SGHW----SEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CCCC----CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1112 2357789999999999999999999876
No 159
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-37 Score=364.08 Aligned_cols=250 Identities=27% Similarity=0.371 Sum_probs=203.5
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+++|++++||||+++++++.+.+..++||||+
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~ 266 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 266 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence 34678999999999999986 68999999997542 223456788999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~- 340 (576)
T 2acx_A 267 NGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 340 (576)
T ss_dssp CSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc-
Confidence 999999998643 234589999999999999999999998 99999999999999999999999999998664432
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+..... ... ..+.
T Consensus 341 -~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~----~~~------~~~p 409 (576)
T 2acx_A 341 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK----EVP------EEYS 409 (576)
T ss_dssp -CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH----HCC------CCCC
T ss_pred -cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh----ccc------ccCC
Confidence 22345799999999999999999999999999999999999999976542222122222211 111 0111
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----sm~eV~~~ 799 (854)
..+ ...+.+++.+|++.||++|| ++.||++|
T Consensus 410 ~~~----s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 ERF----SPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp TTS----CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccC----CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 122 23578999999999999999 78999877
No 160
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=346.30 Aligned_cols=263 Identities=19% Similarity=0.209 Sum_probs=195.8
Q ss_pred HHHHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCCcc-----------chhchHHHHHHhhhcCCCceeeEeee
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNLVQFLGY 590 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~HpnIv~l~g~ 590 (854)
..|.+.+.||+|+||.||+|... .+..||||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 34556789999999999999986 4678999998754321 12346678888999999999999999
Q ss_pred eee----cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC
Q 003046 591 CQE----EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 666 (854)
Q Consensus 591 ~~~----~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~ 666 (854)
+.. ....++||||+ +++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 987 67899999999 9999999853 33789999999999999999999998 999999999999999887
Q ss_pred --cEEEEEecccccccCCCc------ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc
Q 003046 667 --RAKVSDFGLSKFAVDGAS------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 738 (854)
Q Consensus 667 --~~kL~DFGla~~~~~~~~------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~ 738 (854)
.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~- 267 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP- 267 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-
Confidence 999999999976533211 11134569999999999999999999999999999999999999996532111
Q ss_pred ccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHH
Q 003046 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 803 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~ 803 (854)
............. +...+...... ......+.+++.+|++.+|++||++.+|++.|+.+
T Consensus 268 --~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 --VAVQTAKTNLLDE-LPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp --HHHHHHHHHHHHT-TTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred --HHHHHHHHhhccc-ccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 1111111111111 11111000000 01223688999999999999999999999999975
No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-37 Score=332.84 Aligned_cols=251 Identities=22% Similarity=0.367 Sum_probs=201.5
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
.+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence 4556789999999999999986 68999999987543 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 88 SGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp TTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred CCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 9999999884 345688999999999999999999998 999999999999999999999999999975533221
Q ss_pred -ceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 685 -HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 685 -~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
.......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...... ...+..|... ... ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~----~~~---~~-- 229 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKEK----KTY---LN-- 229 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT--SHHHHHHHTT----CTT---ST--
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHhhhc----ccc---cC--
Confidence 22334568999999999987765 77899999999999999999999764421 1112222111 100 00
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+.+++.+|++.+|++|||+.|++++
T Consensus 230 ~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 PWKKI----DSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TGGGS----CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred chhhc----CHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 01112 2357789999999999999999999875
No 162
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2e-37 Score=360.91 Aligned_cols=251 Identities=23% Similarity=0.357 Sum_probs=202.4
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.||+|+||.||+|+.+ +|+.||||++..... .....+..|+.++++++||||+++++++...+..++||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 467999999999999986 689999999975422 2345678899999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++.........+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-K 345 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-C
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-c
Confidence 999999975544455789999999999999999999998 999999999999999999999999999986544322 2
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 766 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 766 (854)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+... .. .+.. .+...
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~---i~-~~~~------~~p~~ 415 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR---VL-EQAV------TYPDK 415 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH---HH-HCCC------CCCTT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH---Hh-hccc------CCCcc
Confidence 23457999999999999999999999999999999999999999765422111122221 11 1111 01112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003046 767 YDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 799 (854)
Q Consensus 767 ~~~~~~~~l~~l~~~Cl~~~P~~RPsm-----~eV~~~ 799 (854)
. ...+.+++.+|++.+|++||++ .||.+|
T Consensus 416 ~----s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 416 F----SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp S----CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred c----CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 2 2457889999999999999965 666654
No 163
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=348.05 Aligned_cols=263 Identities=27% Similarity=0.403 Sum_probs=206.3
Q ss_pred HHhhccccccCcEEEEEEEE-----CCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecC--eEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--~~~lV 600 (854)
+.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 45678999999999999985 368899999998765555678999999999999999999999986644 68999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 123 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp ECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999542 34588999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCcce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccc--------ccccchHHHHHHhh
Q 003046 681 DGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG--------ANCRNIVQWAKLHI 750 (854)
Q Consensus 681 ~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~--------~~~~~l~~~~~~~~ 750 (854)
...... .....++..|+|||.+.+..++.++|||||||++|||++|..|+...... .............+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 433221 22345778899999999888999999999999999999999998643200 00001111111122
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
..+... ..+......+.+++.+|++.+|++||++.||++.|+.+..
T Consensus 277 ~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 277 KNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 211110 1111223468899999999999999999999999998764
No 164
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.7e-38 Score=335.33 Aligned_cols=246 Identities=19% Similarity=0.324 Sum_probs=197.9
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
..+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+..+.++ +||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 34556789999999999999987 78999999997542 33456788899999999 9999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC----------------
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---------------- 665 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---------------- 665 (854)
||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 99999999999965433345689999999999999999999998 99999999999999844
Q ss_pred ---CcEEEEEecccccccCCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccc
Q 003046 666 ---MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 741 (854)
Q Consensus 666 ---~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~ 741 (854)
..+||+|||+++...... ...||+.|+|||.+.+. .++.++|||||||++|||++|..++.... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~ 236 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------Q 236 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------H
T ss_pred CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------H
Confidence 479999999998654322 23489999999999865 56689999999999999999998764332 1
Q ss_pred hHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 742 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 742 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+ ..+..+... .+....+ ..+.+++.+|++.||++|||+.|+++|
T Consensus 237 ---~--~~~~~~~~~-----~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 ---W--HEIRQGRLP-----RIPQVLS----QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ---H--HHHHTTCCC-----CCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ---H--HHHHcCCCC-----CCCcccC----HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1 111122211 1112222 357899999999999999999999876
No 165
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.5e-38 Score=342.31 Aligned_cols=260 Identities=27% Similarity=0.417 Sum_probs=196.4
Q ss_pred HHHhhccccccCcEEEEEEEEC----CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecC-----
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----- 595 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----- 595 (854)
.+.+.+.||+|+||.||+|.+. .++.||||+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 114 (313)
T 3brb_A 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114 (313)
T ss_dssp GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence 4456788999999999999765 24589999987543 223456889999999999999999999997655
Q ss_pred eEEEEEEecCCCCHHHhhcccc--cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Df 191 (313)
T 3brb_A 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADF 191 (313)
T ss_dssp CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSC
T ss_pred ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeec
Confidence 3499999999999999984322 2345689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003046 674 GLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .+.....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~~---- 263 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMYDYLL---- 263 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHH----
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHHHHHH----
Confidence 99976543322 12233457889999999999999999999999999999999 88999765422 2222111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+... ..... ....+.+++.+|++.+|++||++.+|+++|++++..
T Consensus 264 ~~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 264 HGHRL-----KQPED----CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp TTCCC-----CCBTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCC-----CCCcc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11110 11111 224588999999999999999999999999998653
No 166
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.9e-38 Score=338.28 Aligned_cols=254 Identities=24% Similarity=0.350 Sum_probs=202.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 345688999999999999886 68999999997543 2335678899999999999999999998854 668899999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc-----eeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA-----IIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
|+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 9999999999965433445589999999999999999999998 6 9999999999999999999999999997
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .+.. .+..+....
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~i~~~~~~~ 235 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----ELAG----KIREGKFRR 235 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHTCCCC
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH----HHHH----HHhhccccc
Confidence 6543322 223346899999999999989999999999999999999999999765411 1211 122222211
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 802 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~ 802 (854)
+...+ ...+.+++.+|++.+|++||++.||++++..
T Consensus 236 -----~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 236 -----IPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----CCccc----CHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11122 2458899999999999999999999998764
No 167
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.1e-38 Score=345.54 Aligned_cols=263 Identities=19% Similarity=0.226 Sum_probs=190.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
.|.+.+.||+|+||+||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 3556789999999999999876 688999999975432 2245678999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc-----CCCcEEEEEeccccc
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-----KHMRAKVSDFGLSKF 678 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-----~~~~~kL~DFGla~~ 678 (854)
++ |+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 ~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 115 AE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred CC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 98 599998843 34588999999999999999999998 999999999999994 556699999999986
Q ss_pred ccCCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+...... ........
T Consensus 187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~ 264 (329)
T 3gbz_A 187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGL-PDDTTWPG 264 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC-CCTTTSTT
T ss_pred cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCC-Cchhhhhh
Confidence 543322 22334689999999999874 4899999999999999999999999765422111111110000 00000000
Q ss_pred cc--------CCcccCc-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 II--------DPSLLDE-----YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~i--------d~~l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. .+..... ........+.+++.+|++.||++|||+.|+++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00 0000000 000122467899999999999999999999875
No 168
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.6e-38 Score=346.19 Aligned_cols=260 Identities=23% Similarity=0.402 Sum_probs=206.8
Q ss_pred HHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~l 599 (854)
.+.+.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++...+..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 4556789999999999999765 367899999875432 334568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHhhccccc------ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEe
Q 003046 600 VYEFMHNGTLKEHLYGTLT------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 673 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DF 673 (854)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Df 182 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 182 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcC
Confidence 9999999999999864311 113568889999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCcc-eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhh
Q 003046 674 GLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 674 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
|+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.. .+.
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~----~~~ 254 (322)
T 1p4o_A 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVLR----FVM 254 (322)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH----HHHH----HHH
T ss_pred ccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH----HHHH----HHH
Confidence 999755432211 1223356889999999999999999999999999999999 89998764411 1111 111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+.... . .......+.+++.+|++.+|++||++.|++++|++.+..
T Consensus 255 ~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 255 EGGLLD-----K----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp TTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred cCCcCC-----C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 221111 0 111234578999999999999999999999999987653
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6e-38 Score=336.01 Aligned_cols=249 Identities=30% Similarity=0.460 Sum_probs=195.7
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeec-CeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-GRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|+.+ ++.||||+++... ..+.+.+|++++++++||||+++++++... +..++||||+++
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 99 (278)
T 1byg_A 23 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 99 (278)
T ss_dssp EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred ceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCC
Confidence 446789999999999999986 8899999987542 456788999999999999999999997554 478999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 170 (278)
T 1byg_A 100 GSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 170 (278)
T ss_dssp EEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence 9999998532 123478889999999999999999998 9999999999999999999999999998754322
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+... +..+.. .....
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~----~~~~~~-----~~~~~ 237 (278)
T 1byg_A 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPR----VEKGYK-----MDAPD 237 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----GHHHH----HTTTCC-----CCCCT
T ss_pred ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HhcCCC-----CCCcc
Confidence 123357899999999999999999999999999999998 99999765421 22211 111110 11111
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
. ....+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 238 ~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 238 G----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c----CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 2 23468899999999999999999999999998754
No 170
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.4e-37 Score=343.04 Aligned_cols=263 Identities=23% Similarity=0.290 Sum_probs=199.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-----CCceeeEeeeeeecCeEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----HRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----HpnIv~l~g~~~~~~~~~ 598 (854)
...|.+.++||+|+||.||+|+.. +++.||||+++.. ......+..|+.++++++ ||||+++++++...+..+
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 345666789999999999999985 6889999998642 233456778999999986 999999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC--------------
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------------- 664 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-------------- 664 (854)
+||||+ +++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred EEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccc
Confidence 999999 89999998643 233588899999999999999999998 9999999999999975
Q ss_pred -----------CCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003046 665 -----------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 665 -----------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~ 733 (854)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 789999999999864332 23456899999999999999999999999999999999999999764
Q ss_pred cccccccchHH--------HHHHhhhcCCcccccCCc-cc----C-cCCHH---------------HHHHHHHHHHHccC
Q 003046 734 KFGANCRNIVQ--------WAKLHIESGDIQGIIDPS-LL----D-EYDIQ---------------SMWKIEEKALMCVL 784 (854)
Q Consensus 734 ~~~~~~~~l~~--------~~~~~~~~~~~~~~id~~-l~----~-~~~~~---------------~~~~l~~l~~~Cl~ 784 (854)
...+....+.. +...... ......++.. +. . ..... ....+.+++.+|++
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 341 (360)
T 3llt_A 263 EHMEHLAMMESIIQPIPKNMLYEATK-TNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ 341 (360)
T ss_dssp SHHHHHHHHHHHTCCCCHHHHHHHTT-SGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHhcCCCCHHHHhhhhh-ccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence 42211111111 0000000 0000000000 00 0 00000 11457799999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003046 785 PHGHMRPSISEVLKD 799 (854)
Q Consensus 785 ~~P~~RPsm~eV~~~ 799 (854)
.||++|||+.|+++|
T Consensus 342 ~dP~~Rpta~elL~h 356 (360)
T 3llt_A 342 IDPTLRPSPAELLKH 356 (360)
T ss_dssp SSGGGSCCHHHHTTS
T ss_pred CChhhCCCHHHHhcC
Confidence 999999999999875
No 171
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=343.26 Aligned_cols=261 Identities=14% Similarity=0.194 Sum_probs=203.8
Q ss_pred HHHhhccccccCcEEEEEEEECC---------CcEEEEEEEecCCccchhchHHHHHHhhhcCCCceee-----------
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQ----------- 586 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~~---------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~----------- 586 (854)
.|.+.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 34567899999999999998874 789999998743 56889999999999999987
Q ss_pred ----Eeeeeee-cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeE
Q 003046 587 ----FLGYCQE-EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 661 (854)
Q Consensus 587 ----l~g~~~~-~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NIL 661 (854)
+++++.. .+..++||||+ +++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+|||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 5677766 67889999999 99999999642 246789999999999999999999998 9999999999999
Q ss_pred EcCCC--cEEEEEecccccccCCCcc------eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccc
Q 003046 662 LDKHM--RAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 733 (854)
Q Consensus 662 l~~~~--~~kL~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~ 733 (854)
++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999765432211 123346999999999999999999999999999999999999999765
Q ss_pred cccccccchHHHHHHhhhcCCcccccCCccc-CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 734 KFGANCRNIVQWAKLHIESGDIQGIIDPSLL-DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 734 ~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
... ...+......... ......+.... ... ...+.+++.+|++.+|++||++.||++.|++++..
T Consensus 272 ~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 272 LPN--TEDIMKQKQKFVD--KPGPFVGPCGHWIRP----SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTC--HHHHHHHHHHHHH--SCCCEECTTSCEECC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcC--HHHHHHHHHhccC--ChhhhhhhccccCCC----cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 311 1122222221111 11112221111 111 24588999999999999999999999999998654
No 172
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-37 Score=348.76 Aligned_cols=260 Identities=25% Similarity=0.367 Sum_probs=187.5
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcC-CCceeeEeeeeeecC--eEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEG--RSVLV 600 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~--~~~lV 600 (854)
.|.+.+.||+|+||.||+|... +++.||||++... .......+.+|+.+++++. ||||+++++++...+ ..++|
T Consensus 10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv 89 (388)
T 3oz6_A 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89 (388)
T ss_dssp TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence 3456789999999999999876 6899999998643 2233456778999999997 999999999997544 68999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 90 ~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 90 FDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred ecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99998 589888843 4688889999999999999999998 99999999999999999999999999998653
Q ss_pred CC--------------------CcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003046 681 DG--------------------ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 681 ~~--------------------~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~ 739 (854)
.. .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 1112234579999999999986 67899999999999999999999999765422111
Q ss_pred cchHHHHHHhhhcCCcc---ccc------------------CCcccCcCC------------HHHHHHHHHHHHHccCCC
Q 003046 740 RNIVQWAKLHIESGDIQ---GII------------------DPSLLDEYD------------IQSMWKIEEKALMCVLPH 786 (854)
Q Consensus 740 ~~l~~~~~~~~~~~~~~---~~i------------------d~~l~~~~~------------~~~~~~l~~l~~~Cl~~~ 786 (854)
..+.. ........ .+- .......++ ......+.+++.+|++.|
T Consensus 241 ~~i~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 241 ERIIG----VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHH----HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHH----hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 11111 00000000 000 000000000 011245789999999999
Q ss_pred CCCCCCHHHHHHH
Q 003046 787 GHMRPSISEVLKD 799 (854)
Q Consensus 787 P~~RPsm~eV~~~ 799 (854)
|++|||+.|+++|
T Consensus 317 P~~R~t~~e~l~H 329 (388)
T 3oz6_A 317 PNKRISANDALKH 329 (388)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999987
No 173
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.5e-38 Score=352.78 Aligned_cols=266 Identities=20% Similarity=0.232 Sum_probs=198.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeec------------
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------------ 594 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------------ 594 (854)
|.+.+.||+|+||+||+|+.. +|+.||||++... .....+|+++++.++||||+++++++...
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 456789999999999999875 6899999998644 23345799999999999999999998443
Q ss_pred --------------------------CeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCC
Q 003046 595 --------------------------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVP 648 (854)
Q Consensus 595 --------------------------~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 648 (854)
...++||||++ |+|.+.+.........+++..+..++.|++.||+|||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 160 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--- 160 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 34789999998 588888866555567799999999999999999999998
Q ss_pred ceeccCCCCCCeEEc-CCCcEEEEEecccccccCCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhC
Q 003046 649 AIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISG 726 (854)
Q Consensus 649 ~ivHrDIkp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG 726 (854)
+|+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||++|||++|
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 999999999999998 689999999999986544322 2334689999999998874 589999999999999999999
Q ss_pred CcccccccccccccchHHHHH--------Hh---hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 003046 727 QEAISNEKFGANCRNIVQWAK--------LH---IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISE 795 (854)
Q Consensus 727 ~~pf~~~~~~~~~~~l~~~~~--------~~---~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e 795 (854)
+.||.+....+....++.... .. ..+...............+......+.+++.+|++.+|++|||+.|
T Consensus 239 ~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 999986542222112211100 00 0000000000111111111222345889999999999999999999
Q ss_pred HHHH--HHHH
Q 003046 796 VLKD--IQDA 803 (854)
Q Consensus 796 V~~~--L~~~ 803 (854)
+++| ++++
T Consensus 319 ~l~hp~f~~~ 328 (383)
T 3eb0_A 319 AMAHPFFDHL 328 (383)
T ss_dssp HHTSGGGHHH
T ss_pred HhcCHHHHHH
Confidence 9976 5444
No 174
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.5e-38 Score=345.42 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=198.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 106 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence 445689999999999999987 5899999998654322 2455789999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 ~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 107 DHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp SEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988763 234588999999999999999999998 99999999999999999999999999997654322
Q ss_pred ceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-------HHhh-hcCCc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-------KLHI-ESGDI 755 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-------~~~~-~~~~~ 755 (854)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+.... .... .....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 222345689999999999875 78999999999999999999999997654222111111100 0000 00111
Q ss_pred ccccCCcccCcCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGIIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~id~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.....+.+..... ......+.+++.+|++.||++|||+.|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111111111 1223568899999999999999999999986
No 175
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4e-37 Score=332.43 Aligned_cols=246 Identities=21% Similarity=0.343 Sum_probs=201.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence 345689999999999999987 57889999987542 23346688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 97 CRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp CTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999874 345688999999999999999999998 99999999999999999999999999997654322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ .. . ....+.. .+
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~---~-~~~~~~~------~~ 234 (294)
T 2rku_A 170 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TY---L-RIKKNEY------SI 234 (294)
T ss_dssp -CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HH---H-HHHTTCC------CC
T ss_pred -cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HH---H-HHhhccC------CC
Confidence 22234568999999999999899999999999999999999999997654211 11 1 1111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 PKHI----NPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CTTS----CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccc----CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1112 2357889999999999999999999886
No 176
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.4e-37 Score=357.82 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=192.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC--CccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~~ 598 (854)
|.+.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+|+.++||||+++++++... ...+
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 445788999999999999876 6889999999754 233356788999999999999999999999654 3579
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||++++ |.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 144 lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 144 LVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999864 666553 2378889999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHH-------------
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQW------------- 745 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~------------- 745 (854)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+....++..
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 5432 2234457999999999999999999999999999999999999999765422111111111
Q ss_pred --HHHhhhcC-C-----cccccCCcccCc---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 746 --AKLHIESG-D-----IQGIIDPSLLDE---YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 746 --~~~~~~~~-~-----~~~~id~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........ . +...+...+... ........+.+|+.+|++.||++|||++|+++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0 000000000000 011224568999999999999999999999987
No 177
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.6e-37 Score=330.55 Aligned_cols=245 Identities=29% Similarity=0.431 Sum_probs=194.8
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeee----cCeEEEEE
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 601 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----~~~~~lV~ 601 (854)
.+.+.||+|+||.||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.. ....++||
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 108 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence 45678999999999999876 57899999987543 2335678899999999999999999999865 35689999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCc--eeccCCCCCCeEEc-CCCcEEEEEeccccc
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLD-KHMRAKVSDFGLSKF 678 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDIkp~NILl~-~~~~~kL~DFGla~~ 678 (854)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++..
T Consensus 109 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999943 35688999999999999999999998 7 99999999999998 789999999999975
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 758 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 758 (854)
.... ......||+.|+|||.+. +.++.++|||||||++|||++|+.||.... ........ ...+.....
T Consensus 182 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~-~~~~~~~~~ 250 (290)
T 1t4h_A 182 KRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRR-VTSGVKPAS 250 (290)
T ss_dssp CCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHH-HTTTCCCGG
T ss_pred cccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC------cHHHHHHH-HhccCCccc
Confidence 4332 223456999999999876 458999999999999999999999997543 11111111 111111111
Q ss_pred cCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 759 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 759 id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+ ... ...+.+++.+|++.+|++|||+.||++|
T Consensus 251 ~~----~~~----~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 251 FD----KVA----IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GG----GCC----CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cC----CCC----CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11 111 2358899999999999999999999875
No 178
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=344.93 Aligned_cols=259 Identities=21% Similarity=0.304 Sum_probs=192.4
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
.+.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 83 (324)
T 3mtl_A 5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD- 83 (324)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence 45678999999999999987 689999999875432 223356679999999999999999999999999999999997
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 84 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~ 156 (324)
T 3mtl_A 84 KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 156 (324)
T ss_dssp EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence 5888888532 34588899999999999999999998 99999999999999999999999999997544322 22
Q ss_pred eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc---CCcccccCC-
Q 003046 687 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES---GDIQGIIDP- 761 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~---~~~~~~id~- 761 (854)
.....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+ ........... .........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE----QLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHhchhhhcch
Confidence 233468999999999876 568999999999999999999999997655222 11211111111 001111000
Q ss_pred --------cccC----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 --------SLLD----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 --------~l~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... .........+.+++.+|++.||++|||+.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 0001122457899999999999999999999986
No 179
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.9e-37 Score=352.64 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=189.8
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--------ccchhchHHHHHHhhhcCCCceeeEeeeeeecCe
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--------YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~ 596 (854)
..|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+++|++++||||+++++++.. +.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence 34566789999999999999876 57899999987542 1123468899999999999999999999854 55
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC---CcEEEEEe
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDF 673 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~~kL~DF 673 (854)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 214 ~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp EEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred eEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 799999999999998884 345689999999999999999999998 99999999999999754 45999999
Q ss_pred cccccccCCCcceeecccccccccCcccccc---CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 674 GLSKFAVDGASHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 674 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
|+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+... +
T Consensus 287 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~----i 357 (419)
T 3i6u_A 287 GHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQ----I 357 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC---CHHHH----H
T ss_pred ccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH---HHHHH----H
Confidence 999865432 23344579999999999864 567889999999999999999999997543211 12221 1
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.... .+..... ....+.+++.+|++.+|++||++.|+++|
T Consensus 358 ~~~~~~~--~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TSGKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HTTCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCCC--Cchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111100 0000111 22458899999999999999999999986
No 180
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-37 Score=343.43 Aligned_cols=264 Identities=21% Similarity=0.225 Sum_probs=196.9
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc-----chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
.|.+.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 11 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 90 (346)
T 1ua2_A 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV 90 (346)
T ss_dssp --CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred ccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEE
Confidence 4566789999999999999986 5899999998753221 134678999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 91 FDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999986 88888753 234688889999999999999999998 99999999999999999999999999998654
Q ss_pred CCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc--
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG-- 757 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 757 (854)
... .......||+.|+|||.+.+. .++.++|||||||++|||++|..||......+....+....... ......+
T Consensus 164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 241 (346)
T 1ua2_A 164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP-TEEQWPDMC 241 (346)
T ss_dssp SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC-CTTTSSSTT
T ss_pred CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCC-Chhhhhhhc
Confidence 332 223345689999999999764 57889999999999999999999997654221111111110000 0000000
Q ss_pred ----ccCCcccCcCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 ----IIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ----~id~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+........+ ......+.+++.+|++.||++|||+.|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000011 1122468899999999999999999999986
No 181
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=333.70 Aligned_cols=248 Identities=24% Similarity=0.387 Sum_probs=195.5
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCCCCHH
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 610 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~ 610 (854)
..||+|+||.||+|... +++.||||++..........+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 47999999999999975 68899999998765555677899999999999999999999999999999999999999999
Q ss_pred HhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-CCcEEEEEecccccccCCCcceeec
Q 003046 611 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVSSI 689 (854)
Q Consensus 611 ~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~ 689 (854)
+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...... .....
T Consensus 108 ~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 182 (295)
T 2clq_A 108 ALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTET 182 (295)
T ss_dssp HHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Ccccc
Confidence 9986432 233567888889999999999999998 9999999999999997 8999999999997654322 12234
Q ss_pred ccccccccCccccccCc--CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcC
Q 003046 690 VRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 767 (854)
Q Consensus 690 ~~gt~~Y~aPE~~~~~~--~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 767 (854)
..||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....... ...+..... . ..+.+....
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~--~-----~~~~~~~~~ 251 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVGMF--K-----VHPEIPESM 251 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHHHH--C-----CCCCCCTTS
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhccc--c-----ccccccccC
Confidence 56899999999997653 7889999999999999999999997543111 001100010 0 111111222
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 768 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 768 ~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.+++.+|++.+|++||++.|++++
T Consensus 252 ----~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 252 ----SAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----CHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2357889999999999999999999875
No 182
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.2e-37 Score=339.08 Aligned_cols=246 Identities=21% Similarity=0.346 Sum_probs=201.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||++... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 122 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 122 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEec
Confidence 445789999999999999987 57899999987542 23356688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 123 ~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 123 CRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999874 245688999999999999999999998 99999999999999999999999999998654322
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ... . +..+.. .+
T Consensus 196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~---~-~~~~~~------~~ 260 (335)
T 2owb_A 196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYL---R-IKKNEY------SI 260 (335)
T ss_dssp -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHH---H-HHHTCC------CC
T ss_pred -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH----HHH---H-HhcCCC------CC
Confidence 22234569999999999999999999999999999999999999997644211 111 1 111111 11
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
....+ ..+.+++.+|++.||++||++.|++++
T Consensus 261 ~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 PKHIN----PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11122 357789999999999999999999875
No 183
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.2e-38 Score=353.90 Aligned_cols=240 Identities=14% Similarity=0.132 Sum_probs=185.8
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecC---CccchhchHHHH---HHhhhcCCCceeeEe-------eeeeec
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEV---TLLSRIHHRNLVQFL-------GYCQEE 594 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~E~---~~l~~l~HpnIv~l~-------g~~~~~ 594 (854)
.+.+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+ +++++++||||++++ +++...
T Consensus 76 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~ 155 (377)
T 3byv_A 76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 155 (377)
T ss_dssp EEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECT
T ss_pred EEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhcc
Confidence 34688999999999999974 6899999999743 223456788999 555566899999998 555544
Q ss_pred C-----------------eEEEEEEecCCCCHHHhhcccc---cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccC
Q 003046 595 G-----------------RSVLVYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRD 654 (854)
Q Consensus 595 ~-----------------~~~lV~e~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 654 (854)
+ ..++||||+ +|+|.+++.... .....+++..++.|+.||+.||+|||+. +|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 231 (377)
T 3byv_A 156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTY 231 (377)
T ss_dssp TSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 3 278999999 689999996421 1123456788889999999999999998 999999
Q ss_pred CCCCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccC-----------cCCCcchhhhHHHHHHHH
Q 003046 655 LKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-----------QLTDKSDVYSFGVILLEL 723 (854)
Q Consensus 655 Ikp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~s~~sDVwS~Gvvl~el 723 (854)
|||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 999999999999999999999985322 3344567 999999999887 899999999999999999
Q ss_pred HhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 724 ISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 724 ltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
++|+.||...........+ .. . ....+ ..+.+++.+|++.||++||++.|++++
T Consensus 307 ltg~~Pf~~~~~~~~~~~~----------------~~-~-~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 307 WCADLPITKDAALGGSEWI----------------FR-S-CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHSSCCC------CCSGGG----------------GS-S-CCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHCCCCCcccccccchhhh----------------hh-h-ccCCC----HHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999999765422111111 00 0 01222 357899999999999999999999975
No 184
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.3e-37 Score=354.00 Aligned_cols=259 Identities=24% Similarity=0.279 Sum_probs=194.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~~lV 600 (854)
|.+.+.||+|+||.||+|++. +++.||||++... .+...+|+++|++++||||+++++++... ...++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----chhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 345688999999999999986 5899999998643 23445799999999999999999998542 236799
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-CcEEEEEecccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFA 679 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-~~~kL~DFGla~~~ 679 (854)
|||+++ +|.+.+.........+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999985 67666654333456789999999999999999999998 99999999999999965 67899999999865
Q ss_pred cCCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh-------h-
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------I- 750 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~-------~- 750 (854)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+....... +
T Consensus 208 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~---~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 208 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD---QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHHHH
T ss_pred ccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHH
Confidence 44322 2334689999999999764 78999999999999999999999997654221 222221110 0
Q ss_pred -hcCCcccccCCcccC-----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 -ESGDIQGIIDPSLLD-----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 -~~~~~~~~id~~l~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+..-+.+.. .+.......+.+|+.+|++.||++||++.|+++|
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 001111111111110 0111223468899999999999999999999976
No 185
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-37 Score=342.22 Aligned_cols=261 Identities=26% Similarity=0.402 Sum_probs=203.2
Q ss_pred HHHHhhccccccCcEEEEEEEEC------CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 598 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 598 (854)
..+.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.++++++||||+++++++...+..+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 34556789999999999999842 46789999997542 334567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHhhccccc---ccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEEEE
Q 003046 599 LVYEFMHNGTLKEHLYGTLT---HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSD 672 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL~D 672 (854)
+||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||+|
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~D 186 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 186 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECc
Confidence 99999999999999965321 224588999999999999999999998 9999999999999994 45699999
Q ss_pred ecccccccCCCc-ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhh
Q 003046 673 FGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 673 FGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+....
T Consensus 187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~---- 258 (327)
T 2yfx_A 187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFV---- 258 (327)
T ss_dssp CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHH----
T ss_pred cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH----HHHHHH----
Confidence 999975433222 22233458999999999999999999999999999999998 99999754411 222221
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
..+... ..... ....+.+++.+|++.+|++||++.||+++|+.+...
T Consensus 259 ~~~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 259 TSGGRM-----DPPKN----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp HTTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hcCCCC-----CCCCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111110 01111 224578999999999999999999999999987653
No 186
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.2e-37 Score=332.67 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=200.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 95 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEe
Confidence 445789999999999999887 57889999986542 22345788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 96 APRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 999999999853 34688999999999999999999998 9999999999999999999999999998754332
Q ss_pred cceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 763 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 763 (854)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ .. . .+.... ..+
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~---~-~~~~~~------~~~ 231 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE----TH---R-RIVNVD------LKF 231 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HH---H-HHHTTC------CCC
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH----HH---H-HHhccc------cCC
Confidence 1234568999999999999999999999999999999999999997644111 11 1 111111 111
Q ss_pred cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 764 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 764 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++||++.|+++|
T Consensus 232 ~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PPFL----SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCcC----CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1122 2357899999999999999999999886
No 187
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6e-37 Score=356.07 Aligned_cols=250 Identities=26% Similarity=0.404 Sum_probs=197.6
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
..|.+.+.||+|+||+||+|+.+ +++.||||++.... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45667889999999999999987 68899999997653 3335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC---CcEEEEEecccccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~~kL~DFGla~~~ 679 (854)
|+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.. +.+||+|||+++..
T Consensus 117 ~~~~g~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 117 CYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp CCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 999999999884 345688999999999999999999998 99999999999999764 55999999999866
Q ss_pred cCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++. ..++.++||||+||++|||++|+.||...... .+... +..+... .
T Consensus 190 ~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~----i~~~~~~--~ 256 (494)
T 3lij_A 190 ENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ----EILRK----VEKGKYT--F 256 (494)
T ss_dssp BTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCC--C
T ss_pred CCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----HHhCCCC--C
Confidence 5432 233456999999999876 56999999999999999999999999765421 12221 1111111 1
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 257 ~~~~~~~~----s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 DSPEWKNV----SEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CSGGGTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CchhcccC----CHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11111112 2357899999999999999999999987
No 188
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.2e-37 Score=335.88 Aligned_cols=247 Identities=25% Similarity=0.417 Sum_probs=203.0
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 345688999999999999875 68899999997553 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 104 ~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 104 GGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp TEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred CCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 999999984 24688999999999999999999998 99999999999999999999999999997654432 1
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccC
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 765 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 765 (854)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..... +..+.. +.+..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~----~~~~~~-----~~~~~ 241 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFL----IPKNNP-----PTLEG 241 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHH----HHHSCC-----CCCCS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH----HHHHH----hhcCCC-----CCCcc
Confidence 223456899999999999999999999999999999999999999754311 11111 111111 11122
Q ss_pred cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 766 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 766 ~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.++ ..+.+++.+|++.+|++||++.||+++.
T Consensus 242 ~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 NYS----KPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCC----HHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccC----HHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 222 3578999999999999999999999864
No 189
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.9e-37 Score=355.44 Aligned_cols=250 Identities=27% Similarity=0.377 Sum_probs=200.4
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
..|.+.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 45677899999999999999986 68999999986532 2345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc---CCCcEEEEEecccccc
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFA 679 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~---~~~~~kL~DFGla~~~ 679 (854)
|+.+|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 102 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 102 LYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999998843 45689999999999999999999998 999999999999995 4567999999999865
Q ss_pred cCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... .+... +..+....
T Consensus 175 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~----i~~~~~~~-- 241 (486)
T 3mwu_A 175 QQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILKR----VETGKYAF-- 241 (486)
T ss_dssp CCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCCS--
T ss_pred CCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----HHhCCCCC--
Confidence 4332 2334569999999999875 5899999999999999999999999765421 11111 11121110
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 242 ~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 DLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSGGGGGS----CHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCcccCCC----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00001112 2357899999999999999999999986
No 190
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.3e-37 Score=335.10 Aligned_cols=261 Identities=24% Similarity=0.388 Sum_probs=183.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 96 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS 96 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCT
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhcc
Confidence 445789999999999999865 68899999986543 2345678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccc----cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 606 NGTLKEHLYGTL----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 606 ~gsL~~~L~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
+++|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173 (303)
T ss_dssp TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence 999999985421 1244589999999999999999999998 999999999999999999999999999876543
Q ss_pred CCc----ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 682 GAS----HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 682 ~~~----~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ...............
T Consensus 174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----VLMLTLQNDPPSLET 249 (303)
T ss_dssp --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HHHHHHTSSCCCTTC
T ss_pred CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----HHHHHhccCCCcccc
Confidence 211 11233468999999999876 568999999999999999999999997654211 111111000000001
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...++.....++ ..+.+++.+|++.||++||++.|++++
T Consensus 250 ~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 GVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111122222233 357899999999999999999999985
No 191
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.5e-37 Score=329.32 Aligned_cols=245 Identities=24% Similarity=0.423 Sum_probs=192.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence 445789999999999999987 68999999987542 22345788999999999999999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 93 VSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred cCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999999853 34688999999999999999999998 99999999999999999999999999997654322
Q ss_pred cceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 684 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 684 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... .+... +..+.. .
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~----~~~~~~------~ 229 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP----TLFKK----IRGGVF------Y 229 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHCCC------C
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHHH----hhcCcc------c
Confidence 2233468999999999987765 68999999999999999999999764421 11111 111111 0
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.... ...+.+++.+|++.+|++||++.||++|
T Consensus 230 ~~~~~----~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 IPEYL----NRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cchhc----CHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11111 2357899999999999999999999986
No 192
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.1e-37 Score=344.83 Aligned_cols=263 Identities=22% Similarity=0.283 Sum_probs=198.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 35 y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 114 (360)
T 3eqc_A 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114 (360)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred ceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCC
Confidence 345678999999999999987 68999999997653 3335678899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+|+|.+++.. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 115 GGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp TCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 9999999853 346889999999999999999999831 7999999999999999999999999998754321
Q ss_pred eeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHH--------HH-----------
Q 003046 686 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ--------WA----------- 746 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~--------~~----------- 746 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. ..
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence 22334689999999999999999999999999999999999999975442111000000 00
Q ss_pred ---HHhhhcCCcccccC----CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 747 ---KLHIESGDIQGIID----PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 ---~~~~~~~~~~~~id----~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..........+.++ ..............+.+++.+|++.||++|||+.|+++|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000000000 000000001122358899999999999999999999987
No 193
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.8e-37 Score=356.84 Aligned_cols=251 Identities=28% Similarity=0.398 Sum_probs=203.4
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
...|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 346677899999999999999987 78999999997543 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---cCCCcEEEEEecccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSK 677 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~~kL~DFGla~ 677 (854)
|||+.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999998843 45689999999999999999999998 99999999999999 567899999999998
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... .+... +..+....
T Consensus 178 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~----i~~~~~~~ 246 (484)
T 3nyv_A 178 HFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY----DILKK----VEKGKYTF 246 (484)
T ss_dssp HBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHCCCCC
T ss_pred Eccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH----HHHHH----HHcCCCCC
Confidence 654432 2234569999999999876 6899999999999999999999999765421 12221 12221110
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+...... ....+.+++.+|++.+|++|||+.|+++|
T Consensus 247 --~~~~~~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 --ELPQWKK----VSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --CSGGGGG----SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0000111 22357899999999999999999999876
No 194
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.5e-37 Score=334.68 Aligned_cols=255 Identities=26% Similarity=0.372 Sum_probs=193.8
Q ss_pred HHhhccccccCcEEEEEEEEC--CCc--EEEEEEEecCC---ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK--DGK--EIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~--~~~--~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
+.+.+.||+|+||.||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++.... .++|
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v 98 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMV 98 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEE
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceee
Confidence 456789999999999999864 233 68999987542 233567889999999999999999999998765 7899
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
+||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 99 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 99 TELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999998532 35688999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCcce--eecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 681 DGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 681 ~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... .+... ....+...
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~---~~~~~~~~- 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----QILHK---IDKEGERL- 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH---HHTSCCCC-
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH----HHHHH---HHccCCCC-
Confidence 433222 233457889999999998889999999999999999999 99999765421 12111 11111100
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~ 805 (854)
.... .....+.+++.+|++.+|++||++.+|+++|+++..
T Consensus 245 ----~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 245 ----PRPE----DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ----CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ----CCCc----CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 0111 123458899999999999999999999999998754
No 195
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.9e-37 Score=347.12 Aligned_cols=262 Identities=22% Similarity=0.269 Sum_probs=194.1
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCe------EEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------SVLVY 601 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~------~~lV~ 601 (854)
|.+.+.||+|+||+||+|++..+..||+|++.... ....+|+++++.++||||+++++++...+. .++||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 45678999999999999999877789999886432 234479999999999999999999965443 78999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc-CCCcEEEEEeccccccc
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~~kL~DFGla~~~~ 680 (854)
||++++.+ +.+.........+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+|+...
T Consensus 118 e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 118 EYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp ECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99987543 33332223356788999999999999999999998 999999999999999 79999999999998654
Q ss_pred CCCcceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH--------H---
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK--------L--- 748 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~--------~--- 748 (854)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+....+..... .
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 4332 2334689999999998764 589999999999999999999999986552221112211100 0
Q ss_pred hhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......+..+....+...+.......+.+++.+|++.||++|||+.|+++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000001111000000011111123468899999999999999999999987
No 196
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.5e-36 Score=350.04 Aligned_cols=260 Identities=20% Similarity=0.336 Sum_probs=205.3
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCC-CceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH-RNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
|.+.++||+|+||.||+|+.. +++.||||++.... ...++..|+++++.++| +++..+..++...+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 445789999999999999875 68999999886543 23568899999999976 56666777778888899999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---cCCCcEEEEEecccccccCC
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl---~~~~~~kL~DFGla~~~~~~ 682 (854)
+++|.+++... ...+++..++.|+.||+.||+|||++ +|+||||||+|||| +.++.+||+|||+++.....
T Consensus 86 g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999998532 45689999999999999999999998 99999999999999 68899999999999866544
Q ss_pred Ccce------eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 683 ASHV------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 683 ~~~~------~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+......... ..+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSIE 238 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccHH
Confidence 3221 22456999999999999999999999999999999999999999875532222222221111111 1010
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
.+...+ ..++.+++..|++.+|++||++.+|++.|++++..
T Consensus 239 -----~l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 -----ALCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp -----HHHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----HHhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 001112 24688999999999999999999999999998654
No 197
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.1e-37 Score=341.00 Aligned_cols=250 Identities=24% Similarity=0.371 Sum_probs=199.1
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc--------chhchHHHHHHhhhc-CCCceeeEeeeeeecCe
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 596 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~ 596 (854)
.|.+.+.||+|+||.||+|++. +|+.||||+++..... ..+.+.+|+.+++++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 3444689999999999999986 6999999999754311 134577899999999 79999999999999999
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
.++||||+++++|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 175 ~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEECCCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 999999999999999985 345688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcceeecccccccccCcccccc------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 677 KFAVDGASHVSSIVRGTVGYLDPEYYIS------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..... +
T Consensus 248 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~----i 317 (365)
T 2y7j_A 248 CHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI----LMLRM----I 317 (365)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----H
T ss_pred cccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH----HHHHH----H
Confidence 7654432 2234569999999999863 35888999999999999999999999754311 11111 1
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.... ..+ .... ....+.+++.+|++.+|++||++.|+++|
T Consensus 318 ~~~~~~~-~~~-~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEGQYQF-SSP-EWDD----RSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHTCCCC-CHH-HHSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCCCC-CCc-cccc----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111100 000 0011 12357899999999999999999999875
No 198
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.9e-37 Score=345.33 Aligned_cols=251 Identities=10% Similarity=0.012 Sum_probs=177.8
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhc--CCCceeeEe-------eeeeec-
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI--HHRNLVQFL-------GYCQEE- 594 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l--~HpnIv~l~-------g~~~~~- 594 (854)
.+.+.||+|+||.||+|++. +++.||||++..... .....+.+|+.+++.+ +||||++++ +++...
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 35688999999999999976 689999999986543 2345567785555444 699988855 344332
Q ss_pred ----------------CeEEEEEEecCCCCHHHhhcccccccccccHHHH------HHHHHHHHHHHHHHHhCCCCceec
Q 003046 595 ----------------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKR------LEIAEDAAKGIEYLHTGCVPAIIH 652 (854)
Q Consensus 595 ----------------~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ivH 652 (854)
...++||||++ |+|.+++... ...+.+..+ ..++.||+.||+|||++ +|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH 217 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH 217 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence 33799999999 8999999643 223444555 67889999999999998 9999
Q ss_pred cCCCCCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCccc
Q 003046 653 RDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 653 rDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf 730 (854)
|||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999986532 1224457799999999987 78999999999999999999999999
Q ss_pred ccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 731 SNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 731 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... . .............+...........+.+++.+|++.||++|||+.|+++|
T Consensus 294 ~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 294 GLVTPGIKG-S--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TBCCTTCTT-C--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCcCccccc-c--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 765421100 0 00000000001111111111223468899999999999999999999875
No 199
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=329.38 Aligned_cols=250 Identities=22% Similarity=0.344 Sum_probs=198.1
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
..+.+.+.||+|+||.||+|... +|+.||||++.... ....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 34556789999999999999887 58999999997543 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++++|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 107 GAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp TTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999852 245688999999999999999999998 999999999999999999999999999976543322
Q ss_pred ceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCccc
Q 003046 685 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 764 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 764 (854)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ... .. ........... .
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~---~~-~~~~~~~~~~~---~ 248 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM----RAI---FM-IPTNPPPTFRK---P 248 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHH---HH-HHHSCCCCCSS---G
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH----HHH---HH-HhcCCCcccCC---c
Confidence 223446899999999999999999999999999999999999999754311 111 11 11111101000 0
Q ss_pred CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 765 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 765 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. ....+.+++.+|++.+|++||++.|++++
T Consensus 249 ~~----~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 249 EL----WSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp GG----SCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cc----CCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11 12357899999999999999999999875
No 200
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.9e-37 Score=339.98 Aligned_cols=265 Identities=19% Similarity=0.270 Sum_probs=197.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeee--------cC
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQE--------EG 595 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--------~~ 595 (854)
.|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 3556789999999999999985 689999999865432 224567899999999999999999999977 45
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 68999999985 777776432 34589999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCC---cceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 676 SKFAVDGA---SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 676 a~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+..... ...
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~ 249 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG-SIT 249 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCC
Confidence 98654322 122234568999999999876 4589999999999999999999999986542211111111100 000
Q ss_pred cCCcccccCCcc--------cCcCCH-HH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 752 SGDIQGIIDPSL--------LDEYDI-QS------MWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 752 ~~~~~~~id~~l--------~~~~~~-~~------~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.......-+... ...... +. ...+.+++.+|++.||++|||+.|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000000 000011 11 2347899999999999999999999986
No 201
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-37 Score=341.13 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=190.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecC------eEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------~~~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 445688999999999999885 68999999986432 223456889999999999999999999997653 459
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 999999 7899998843 4588899999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH-----------
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA----------- 746 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~----------- 746 (854)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+....
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 253 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 5332 233468999999999987 689999999999999999999999997654211111111100
Q ss_pred -----HHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 747 -----KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 -----~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.. +...-...+. .........+.+++.+|++.||++|||+.|+++|
T Consensus 254 ~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 254 QSDEAKNYMKG--LPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp SCHHHHHHHHH--SCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhHHHHHHHHh--CCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000 0000000000 0111123457899999999999999999999986
No 202
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.6e-37 Score=331.68 Aligned_cols=250 Identities=21% Similarity=0.357 Sum_probs=195.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecCC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 606 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~~ 606 (854)
+.+.+.||+|+||.||+|+.. +++.||+|++..........+.+|++++++++||||+++++++...+..++||||+++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 100 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 100 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence 445788999999999999987 5889999999766656667889999999999999999999999999999999999999
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
++|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...... ...
T Consensus 101 ~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 173 (302)
T 2j7t_A 101 GAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQK 173 (302)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC
T ss_pred CcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccc
Confidence 999998853 235688999999999999999999998 9999999999999999999999999987532211 111
Q ss_pred eecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 687 SSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
.....||+.|+|||.+. ...++.++|||||||++|||++|+.||....... . ...... +.......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~---~~~~~~-~~~~~~~~- 244 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR----V---LLKIAK-SDPPTLLT- 244 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----H---HHHHHH-SCCCCCSS-
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH----H---HHHHhc-cCCcccCC-
Confidence 22345899999999984 5678899999999999999999999997644111 1 111111 11111110
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 245 --~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 245 --PSKW----SVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp --GGGS----CHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred --cccc----CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1111 2357899999999999999999999875
No 203
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-36 Score=333.73 Aligned_cols=256 Identities=19% Similarity=0.300 Sum_probs=196.0
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeee--cCeEEEEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQE--EGRSVLVYE 602 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~--~~~~~lV~e 602 (854)
.|.+.+.||+|+||.||+|+.. +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ....++|||
T Consensus 37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred ceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 3456789999999999999875 6899999998643 3567899999999997 9999999999987 667899999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC-cEEEEEecccccccC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVD 681 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~-~~kL~DFGla~~~~~ 681 (854)
|+.+++|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 114 ~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 114 HVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp CCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999998873 377888999999999999999998 999999999999999776 899999999986544
Q ss_pred CCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH--------hhhc
Q 003046 682 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL--------HIES 752 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~--------~~~~ 752 (854)
... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+...... .+..
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch--HHHHHHHHHhcCCchhhhHHHH
Confidence 322 233468999999999987 67899999999999999999999999543211 1111111000 0000
Q ss_pred CCc--------------ccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 753 GDI--------------QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 753 ~~~--------------~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...................+.+++.+|++.||++|||++|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 00000000011111123468899999999999999999999986
No 204
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-36 Score=333.86 Aligned_cols=252 Identities=24% Similarity=0.390 Sum_probs=195.9
Q ss_pred HHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--------cchhchHHHHHHhhhcCCCceeeEeeeeeecC
Q 003046 525 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 595 (854)
Q Consensus 525 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~ 595 (854)
...|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 345667899999999999999886 578999999865321 22346889999999999999999999987655
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc---EEEEE
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSD 672 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---~kL~D 672 (854)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999884 345688999999999999999999998 9999999999999987654 99999
Q ss_pred ecccccccCCCcceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh
Q 003046 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .+.....
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~-- 233 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQIT-- 233 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHHH--
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHHH--
Confidence 9999865432 2223456899999999974 4678899999999999999999999997644221 1222111
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+... ..+..... ....+.+++.+|++.||++||++.|+++|
T Consensus 234 --~~~~~--~~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 --SGKYN--FIPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --HTCCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --hCccc--cCchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 11110 00111111 12457899999999999999999999975
No 205
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-37 Score=333.99 Aligned_cols=252 Identities=25% Similarity=0.335 Sum_probs=185.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-c-chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEec
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-Q-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 604 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~ 604 (854)
+.+.+.||+|+||.||+|+.. +++.||||+++.... . ..+.+.++...++.++||||+++++++..++..++||||+
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECC
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehh
Confidence 445789999999999999985 689999999975422 2 2233445556688889999999999999999999999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+ |+|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 164 (290)
T 3fme_A 89 D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV- 164 (290)
T ss_dssp S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccccc-
Confidence 7 5898888655455677999999999999999999999852 89999999999999999999999999997654332
Q ss_pred ceeecccccccccCcccc----ccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 685 HVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~----~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
......||+.|+|||.+ .+..++.++|||||||++|||++|+.||...... ...+ ......... ...
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~----~~~~~~~~~-~~~- 235 (290)
T 3fme_A 165 -AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQL----KQVVEEPSP-QLP- 235 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--HHHH----HHHHHSCCC-CCC-
T ss_pred -cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch--HHHH----HHHhccCCC-Ccc-
Confidence 22334699999999996 5567889999999999999999999999753211 1111 111111111 000
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 236 ---~~~~----~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 236 ---ADKF----SAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ---TTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---cccC----CHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 0112 2357899999999999999999999885
No 206
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.1e-37 Score=368.45 Aligned_cols=246 Identities=24% Similarity=0.299 Sum_probs=200.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC---ccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||+|+++++++.+.+..++|||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E 422 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence 345678999999999999987 57889999997542 23345677899999887 79999999999999999999999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+|+.....
T Consensus 423 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 423 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred CcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999953 35689999999999999999999998 9999999999999999999999999999854332
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +.+ .. ..+.+
T Consensus 496 ~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~----~~~---~i-~~~~~------- 559 (674)
T 3pfq_A 496 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQ---SI-MEHNV------- 559 (674)
T ss_dssp T-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH---HH-HSSCC-------
T ss_pred C-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH----HHH---HH-HhCCC-------
Confidence 2 23345679999999999999999999999999999999999999998654221 111 11 11111
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm-----~eV~~~ 799 (854)
.++......+.+|+.+|++.||++||++ +||.+|
T Consensus 560 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 560 ---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ---CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1111123457899999999999999997 777765
No 207
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.2e-36 Score=345.30 Aligned_cols=196 Identities=24% Similarity=0.355 Sum_probs=163.1
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~l 599 (854)
|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++... ...++
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 456789999999999999876 57889999997532 23346788999999999999999999999766 57899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||++ |+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 108 v~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFK----TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEECCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCC-cCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 999987 59999884 345689999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCcc---------------------eeecccccccccCcccc-ccCcCCCcchhhhHHHHHHHHHhCCcccc
Q 003046 680 VDGASH---------------------VSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISGQEAIS 731 (854)
Q Consensus 680 ~~~~~~---------------------~~~~~~gt~~Y~aPE~~-~~~~~s~~sDVwS~Gvvl~elltG~~pf~ 731 (854)
...... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 433211 22455799999999986 45679999999999999999998665553
No 208
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-37 Score=354.25 Aligned_cols=192 Identities=24% Similarity=0.368 Sum_probs=150.6
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~ 598 (854)
.|.+.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++... ...+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 3556789999999999999876 68999999986532 23346788999999999999999999999443 5789
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+. |+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+|+.
T Consensus 134 lv~e~~~-~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 134 VVLEIAD-SDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEECCCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEeccc-cchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 9999984 68988884 345689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCc--------------------------ceeecccccccccCcccc-ccCcCCCcchhhhHHHHHHHHHhC
Q 003046 679 AVDGAS--------------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISG 726 (854)
Q Consensus 679 ~~~~~~--------------------------~~~~~~~gt~~Y~aPE~~-~~~~~s~~sDVwS~Gvvl~elltG 726 (854)
...... .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 542211 122345689999999986 456799999999999999999993
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.7e-37 Score=330.26 Aligned_cols=261 Identities=22% Similarity=0.308 Sum_probs=196.4
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|+.+ +++.||||++.... ......+.+|++++++++||||+++++++..++..++||||++
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc
Confidence 34678999999999999987 68999999986543 2234678899999999999999999999999999999999998
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 -~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~- 158 (299)
T 2r3i_A 86 -QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 158 (299)
T ss_dssp -EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB-
T ss_pred -CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc-
Confidence 6999988543 234578889999999999999999998 999999999999999999999999999976543221
Q ss_pred eeecccccccccCccccccCc-CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC--ccc-----
Q 003046 686 VSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD--IQG----- 757 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~--~~~----- 757 (854)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......+ .+............ ...
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID---QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCchhhhhHhhcCc
Confidence 223345899999999998765 7899999999999999999999997654211 11111111100000 000
Q ss_pred ccCCccc----CcC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IIDPSLL----DEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~----~~~---~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.+. ... .......+.+++.+|++.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 000 00122467899999999999999999999874
No 210
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.3e-36 Score=328.64 Aligned_cols=249 Identities=27% Similarity=0.317 Sum_probs=198.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---------cchhchHHHHHHhhhcC-CCceeeEeeeeeecCe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---------QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGR 596 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---------~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~ 596 (854)
+.+.+.||+|+||.||+|..+ +++.||||++..... ...+.+.+|+++++++. ||||+++++++...+.
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 98 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence 345688999999999999986 688999999975431 12346788999999995 9999999999999999
Q ss_pred EEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccc
Q 003046 597 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 676 (854)
Q Consensus 597 ~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla 676 (854)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 99 FFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999999853 35688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCcceeecccccccccCccccc------cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 677 KFAVDGASHVSSIVRGTVGYLDPEYYI------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 677 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
+...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||...... .+.. .+
T Consensus 172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~ 241 (298)
T 1phk_A 172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM----LMLR----MI 241 (298)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HH
T ss_pred hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH----HHHH----HH
Confidence 7654332 223356899999999985 456888999999999999999999999754411 1111 11
Q ss_pred hcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..+.... ....... ....+.+++.+|++.+|++||++.|+++|
T Consensus 242 ~~~~~~~--~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 242 MSGNYQF--GSPEWDD----YSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHTCCCC--CTTTGGG----SCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hcCCccc--Ccccccc----cCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1111110 0000111 23458899999999999999999999874
No 211
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.1e-37 Score=344.93 Aligned_cols=272 Identities=21% Similarity=0.281 Sum_probs=203.4
Q ss_pred cCHHHHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC--------CCceeeEe
Q 003046 518 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH--------HRNLVQFL 588 (854)
Q Consensus 518 ~~~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~--------HpnIv~l~ 588 (854)
+..+++....|.+.++||+|+||+||+|+.. +++.||||+++.. ......+.+|++++++++ |+||++++
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~ 107 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 107 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEE
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeee
Confidence 3444444455677889999999999999876 5889999999743 233567889999999995 78899999
Q ss_pred eeee----ecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC
Q 003046 589 GYCQ----EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 664 (854)
Q Consensus 589 g~~~----~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~ 664 (854)
+++. .....++||||+ +++|.+.+... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++.
T Consensus 108 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~ 182 (397)
T 1wak_A 108 DDFKISGVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSV 182 (397)
T ss_dssp EEEEEEETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECC
T ss_pred cceeecCCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEec
Confidence 9987 456789999999 56666666432 2356899999999999999999999953 8999999999999997
Q ss_pred CC-------------------------------------------------cEEEEEecccccccCCCcceeeccccccc
Q 003046 665 HM-------------------------------------------------RAKVSDFGLSKFAVDGASHVSSIVRGTVG 695 (854)
Q Consensus 665 ~~-------------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~ 695 (854)
++ .+||+|||+++..... .....||+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~ 258 (397)
T 1wak_A 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQ 258 (397)
T ss_dssp CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGG
T ss_pred cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCc
Confidence 75 7999999999865432 233468999
Q ss_pred ccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccc--hHHHHHHhhhc--------C-----------C
Q 003046 696 YLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN--IVQWAKLHIES--------G-----------D 754 (854)
Q Consensus 696 Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~--l~~~~~~~~~~--------~-----------~ 754 (854)
|+|||++.+..++.++|||||||++|||++|+.||........... ........... + .
T Consensus 259 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 338 (397)
T 1wak_A 259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD 338 (397)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSS
T ss_pred ccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccc
Confidence 9999999999999999999999999999999999976542221111 11111110000 0 0
Q ss_pred cccccCCcc---------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l---------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.+... ....+......+.+|+.+|++.||++|||+.|+++|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 339 LKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp BSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000000000 012345667789999999999999999999999875
No 212
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-36 Score=354.45 Aligned_cols=249 Identities=28% Similarity=0.413 Sum_probs=197.5
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-------------cchhchHHHHHHhhhcCCCceeeEeeeee
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------------QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-------------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~ 592 (854)
.|.+.++||+|+||+||+|+.+ +++.||||++..... ...+.+.+|+.++++++||||+++++++.
T Consensus 37 ~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 116 (504)
T 3q5i_A 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE 116 (504)
T ss_dssp TEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred ceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 3556789999999999999987 578999999975431 22456889999999999999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC---cEE
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAK 669 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~---~~k 669 (854)
..+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+|
T Consensus 117 ~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 117 DKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred cCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 99999999999999999998843 45689999999999999999999998 999999999999999776 699
Q ss_pred EEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHh
Q 003046 670 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 749 (854)
Q Consensus 670 L~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~ 749 (854)
|+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||...... .+...
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~---- 258 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ----DIIKK---- 258 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----
Confidence 99999998664432 233456999999999986 56899999999999999999999999765421 12211
Q ss_pred hhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 750 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 750 ~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+..+.... +....... ...+.+++.+|++.+|++|||+.|+++|
T Consensus 259 i~~~~~~~--~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 VEKGKYYF--DFNDWKNI----SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHCCCCC--CHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHcCCCCC--CccccCCC----CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11221110 00000111 2457899999999999999999999876
No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2e-36 Score=338.52 Aligned_cols=260 Identities=22% Similarity=0.293 Sum_probs=189.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecC------eEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~------~~~ 598 (854)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 445688999999999999876 68899999997542 233456889999999999999999999997654 789
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 107 IVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999974 7887773 3478888999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchH---------------
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV--------------- 743 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~--------------- 743 (854)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+.
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 5432 12234568999999999999999999999999999999999999997654211110000
Q ss_pred HHHHHhhhcCC------cccccCCcccC---cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 744 QWAKLHIESGD------IQGIIDPSLLD---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 744 ~~~~~~~~~~~------~~~~id~~l~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
........... +...+...... .........+.+++.+|++.||++|||++|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000000 00000000000 0112235678999999999999999999999987
No 214
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.2e-37 Score=343.46 Aligned_cols=261 Identities=19% Similarity=0.250 Sum_probs=190.7
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccc-----------hhchHHHHHHhhhcCCCceeeEeeeeee---
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG-----------KREFTNEVTLLSRIHHRNLVQFLGYCQE--- 593 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~-----------~~~~~~E~~~l~~l~HpnIv~l~g~~~~--- 593 (854)
|.+.+.||+|+||.||+|...+++.||||++....... .+.+.+|++++++++||||+++++++..
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 103 (362)
T 3pg1_A 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE 103 (362)
T ss_dssp CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT
T ss_pred eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC
Confidence 34468899999999999998889999999986542221 2568899999999999999999999844
Q ss_pred --cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEE
Q 003046 594 --EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 671 (854)
Q Consensus 594 --~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~ 671 (854)
....++||||++ |+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 104 ~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 104 PAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp TTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEE
Confidence 336899999998 688888753 344689999999999999999999998 99999999999999999999999
Q ss_pred EecccccccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHH--
Q 003046 672 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL-- 748 (854)
Q Consensus 672 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~-- 748 (854)
|||+++..... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+......
T Consensus 177 Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 254 (362)
T 3pg1_A 177 DFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred ecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 99999744332 22234568999999999887 67899999999999999999999999765422222222211000
Q ss_pred --------------hhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 --------------HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 --------------~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... ...... ...............+.+++.+|++.||++|||+.|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 255 IEDVVMFSSPSARDYLR-NSLSNV-PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHTSCHHHHHHTT-TCCCCC-CCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hHHhhhccchhhhHHHH-hhcccC-ChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000 000000 0000000111123458899999999999999999999986
No 215
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.5e-36 Score=336.80 Aligned_cols=262 Identities=21% Similarity=0.283 Sum_probs=197.4
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~lV 600 (854)
|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++... ...++|
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 456789999999999999876 688899999975432 2346788999999999999999999999654 468999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||++ |+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 109 QDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99997 58988884 34588999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCcce--eecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 681 DGASHV--SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 681 ~~~~~~--~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.........+ .+..
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~ 258 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE-DLNC 258 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH-HHHT
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH-HHHH
Confidence 322211 234569999999998765 458999999999999999999999997655332222222110000000 0000
Q ss_pred ------------ccCCccc--CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 ------------IIDPSLL--DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ------------~id~~l~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+.-. ..........+.+++.+|++.||++|||+.|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 00001112457899999999999999999999986
No 216
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.3e-37 Score=340.32 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=195.2
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHH-hhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~-l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|+.. +|+.||||++.... .....++..|+.+ ++.++||||+++++++...+..++||||++
T Consensus 54 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (340)
T 3an0_A 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD 133 (340)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCS
T ss_pred eEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhh
Confidence 34578999999999999975 68999999997543 2233445555555 778899999999999999999999999997
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 685 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 685 (854)
+ +|.+++.........+++..+..++.||+.||+|||++ .+|+||||||+|||++.++.+||+|||+++..... .
T Consensus 134 ~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~ 208 (340)
T 3an0_A 134 T-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--V 208 (340)
T ss_dssp E-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH--H
T ss_pred C-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecccc--c
Confidence 5 99998865444566799999999999999999999974 28999999999999999999999999999765432 1
Q ss_pred eeecccccccccCccccc----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 686 VSSIVRGTVGYLDPEYYI----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 686 ~~~~~~gt~~Y~aPE~~~----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .............
T Consensus 209 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~~------ 276 (340)
T 3an0_A 209 AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPSP------ 276 (340)
T ss_dssp HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCCC------
T ss_pred ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCCC------
Confidence 223346999999999964 347889999999999999999999999753211 1111111111110
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.. ......+.+++.+|++.+|++||++.||+++
T Consensus 277 ~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 277 QLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CCCG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCc---ccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1100 1122458899999999999999999999885
No 217
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7.4e-37 Score=348.70 Aligned_cols=196 Identities=26% Similarity=0.341 Sum_probs=168.8
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc------CCCceeeEeeeeeecCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI------HHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l------~HpnIv~l~g~~~~~~~~~lV 600 (854)
|.+.+.||+|+||.||+|... +++.||||+++.. ......+.+|+++++.+ +|+||+++++++...+..++|
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 556789999999999999876 5889999999743 23345677888888887 577999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc--EEEEEeccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKF 678 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~--~kL~DFGla~~ 678 (854)
|||+. ++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 178 ~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 178 FELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp ECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 99996 6999988543 234588999999999999999999998 9999999999999999987 99999999975
Q ss_pred ccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~ 734 (854)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 252 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 252 EHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 4322 233468999999999999999999999999999999999999997654
No 218
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1e-36 Score=364.80 Aligned_cols=258 Identities=21% Similarity=0.338 Sum_probs=202.8
Q ss_pred HHHHhhccccccCcEEEEEEEECC----CcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
..+.+.+.||+|+||.||+|.+.. +..||||+++... ....+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 345567889999999999998752 4579999986543 233467899999999999999999999985 4568999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 469 ~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999532 34588999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
...........+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+.... .+...+ ..+....
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----~~~~~i----~~~~~~~-- 612 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRI----ENGERLP-- 612 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHH----HHTCCCC--
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHH----HcCCCCC--
Confidence 443333344557889999999999999999999999999999997 99999765421 122211 1111110
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 807 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~~ 807 (854)
+.. .....+.+++.+|++.+|++||++.||++.|+.++..+
T Consensus 613 ---~~~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 ---MPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ---CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 111 12346789999999999999999999999999987543
No 219
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.6e-36 Score=335.61 Aligned_cols=258 Identities=23% Similarity=0.293 Sum_probs=201.1
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCCccch-----------------hchHHHHHHhhhcCCCceeeEeee
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGK-----------------REFTNEVTLLSRIHHRNLVQFLGY 590 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~-----------------~~~~~E~~~l~~l~HpnIv~l~g~ 590 (854)
|.+.+.||+|+||.||+|+. +++.||||++........ ..+.+|++++++++||||++++++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 111 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEE
T ss_pred eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 44678999999999999999 799999999975422111 678999999999999999999999
Q ss_pred eeecCeEEEEEEecCCCCHHHhhccc--cc--ccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEEcCC
Q 003046 591 CQEEGRSVLVYEFMHNGTLKEHLYGT--LT--HEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKH 665 (854)
Q Consensus 591 ~~~~~~~~lV~e~~~~gsL~~~L~~~--~~--~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~ 665 (854)
+...+..++||||+++|+|.+++... .. ....+++..+..++.|++.||+|||+ . +|+||||||+|||++.+
T Consensus 112 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKN 188 (348)
T ss_dssp EESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTT
T ss_pred EeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCC
Confidence 99999999999999999999983211 11 25678999999999999999999999 7 99999999999999999
Q ss_pred CcEEEEEecccccccCCCcceeecccccccccCccccccC-cCCC-cchhhhHHHHHHHHHhCCcccccccccccccchH
Q 003046 666 MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTD-KSDVYSFGVILLELISGQEAISNEKFGANCRNIV 743 (854)
Q Consensus 666 ~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~-~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~ 743 (854)
+.+||+|||+++..... ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||...... ..+.
T Consensus 189 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~ 262 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---VELF 262 (348)
T ss_dssp SCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---HHHH
T ss_pred CcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHH
Confidence 99999999999865433 33445699999999999877 6666 999999999999999999999765421 1122
Q ss_pred HHHHHhhhcCCcccccC--C---ccc----CcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 744 QWAKLHIESGDIQGIID--P---SLL----DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 744 ~~~~~~~~~~~~~~~id--~---~l~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. +..+......+ . .+. ..........+.+++.+|++.+|++||++.|+++|
T Consensus 263 ~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NN----IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HH----HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HH----HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 11111110000 0 000 00001223468899999999999999999999985
No 220
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.9e-36 Score=336.77 Aligned_cols=266 Identities=21% Similarity=0.261 Sum_probs=187.9
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeeecCe-------EE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-------SV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~-------~~ 598 (854)
.+.+.+.||+|+||.||+|+.. +++.||||++.... .......+|++.+..++||||+++++++...+. .+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~ 102 (360)
T 3e3p_A 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN 102 (360)
T ss_dssp TEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEE
Confidence 4455789999999999999986 68999999986543 223456678888899999999999999976443 78
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHH--hCCCCceeccCCCCCCeEEcC-CCcEEEEEecc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--TGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGL 675 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDIkp~NILl~~-~~~~kL~DFGl 675 (854)
+||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||+
T Consensus 103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 99999986 565555444445667888999999999999999999 76 9999999999999997 89999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCc-CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH-------
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK------- 747 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~------- 747 (854)
++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+.....
T Consensus 179 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 179 AKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp CBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHH
Confidence 986544322 23446899999999987654 89999999999999999999999986553222222221100
Q ss_pred Hhhh-cCCcccccCCc------ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 748 LHIE-SGDIQGIIDPS------LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~-~~~~~~~id~~------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ........+.. ............+.+++.+|++.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 00000000000 0011112234578899999999999999999999986
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=330.77 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=195.9
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
+.+.+.||+|+||.||+|+.+. .||+|+++... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~ 112 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCK 112 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeeccc
Confidence 3457899999999999999863 49999987542 2334668899999999999999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC--
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-- 683 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~-- 683 (854)
+++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 113 ~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 113 GRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp SEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred CCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 9999999953 234688999999999999999999998 999999999999998 6799999999987543211
Q ss_pred --cceeecccccccccCcccccc---------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc
Q 003046 684 --SHVSSIVRGTVGYLDPEYYIS---------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES 752 (854)
Q Consensus 684 --~~~~~~~~gt~~Y~aPE~~~~---------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~ 752 (854)
........||+.|+|||.+.. ..++.++|||||||++|||++|+.||...... .+.. .+..
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~----~~~~ 257 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE----AIIW----QMGT 257 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH----HHHH----HHHT
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH----Hhcc
Confidence 112233458999999999874 35788999999999999999999999764411 1111 1112
Q ss_pred CCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 753 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 753 ~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
+........ .. ...+.+++.+|++.+|++||++.+|++.|+.+...
T Consensus 258 ~~~~~~~~~----~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLSQI----GM----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCCCS----SC----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCCcC----CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 211111111 11 12478999999999999999999999999998654
No 222
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=328.55 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=194.9
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC----ccchhchHHHHHHhhhcCCCceeeEeeee--eecCeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYC--QEEGRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~--~~~~~~~lV 600 (854)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++ ...+..++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 445789999999999999875 68899999997542 23456789999999999999999999998 445678999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||++++ |.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 9999876 77766432 245688999999999999999999998 99999999999999999999999999998654
Q ss_pred CCC-cceeecccccccccCccccccCc--CCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 681 DGA-SHVSSIVRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 681 ~~~-~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
... ........||+.|+|||++.+.. .+.++|||||||++|||++|+.||...... .+.. .+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----~i~~~~~-- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY----KLFE----NIGKGSY-- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHH----HHHHCCC--
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH----HHHH----HHhcCCC--
Confidence 322 22334456999999999987643 477999999999999999999999764411 1111 1111211
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.... ...+.+++.+|++.||++||++.|++++
T Consensus 231 ----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----AIPGDC----GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCCSSS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCCCcc----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111122 2357799999999999999999999986
No 223
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-36 Score=327.89 Aligned_cols=249 Identities=24% Similarity=0.403 Sum_probs=192.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeee------cCeEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE------EGRSVL 599 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~------~~~~~l 599 (854)
+.+.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.+++++ +||||+++++++.. .+..++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 345789999999999999985 68999999987543 3456788999999999 89999999999976 467899
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~ 679 (854)
||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 105 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 99999999999998643 235688889999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCcceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 680 VDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 680 ~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
.... .......||+.|+|||.+. +..++.++|||||||++|||++|+.||...... .... . .....
T Consensus 180 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~---~-~~~~~ 250 (326)
T 2x7f_A 180 DRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALF---L-IPRNP 250 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH---H-HHHSC
T ss_pred CcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHH---H-hhcCc
Confidence 4322 1223346899999999987 567889999999999999999999999754411 1111 1 11111
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ...+ ...+.+++.+|++.+|++||++.|+++|
T Consensus 251 ~~~~~----~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 251 APRLK----SKKW----SKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CCCCS----CSCS----CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCC----cccc----CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 1112 2357899999999999999999999885
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.3e-36 Score=331.16 Aligned_cols=264 Identities=21% Similarity=0.290 Sum_probs=197.3
Q ss_pred HHhhccccccCcEEEEEEEEC--CCcEEEEEEEecCCc--cchhchHHHHHHhhhc---CCCceeeEeeeee-----ecC
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI---HHRNLVQFLGYCQ-----EEG 595 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l---~HpnIv~l~g~~~-----~~~ 595 (854)
|.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.+++.+ +||||+++++++. ...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 456789999999999999983 678999999875432 2234677888888777 8999999999987 556
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecc
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 675 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGl 675 (854)
..++||||++ |+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred eEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcc
Confidence 7899999998 6999998543 233588999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCc
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 755 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~ 755 (854)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.............
T Consensus 167 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 167 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 9754322 12234568999999999999999999999999999999999999997654221111111110000000000
Q ss_pred ccc------cC---CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 QGI------ID---PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~~~------id---~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... +. ..............+.+++.+|++.+|++||++.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 00 000001111223457899999999999999999999875
No 225
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=340.43 Aligned_cols=263 Identities=20% Similarity=0.266 Sum_probs=180.7
Q ss_pred hccccccCcEEEEEEEEC---CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee--cCeEEEEEEecC
Q 003046 531 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~lV~e~~~ 605 (854)
+++||+|+||+||+|+++ +++.||||++.... ....+.+|+++|++++||||+++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 468999999999999976 57889999986442 23568899999999999999999999954 678999999997
Q ss_pred CCCHHHhhcccc-----cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE----cCCCcEEEEEeccc
Q 003046 606 NGTLKEHLYGTL-----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLS 676 (854)
Q Consensus 606 ~gsL~~~L~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl----~~~~~~kL~DFGla 676 (854)
|+|.+++.... .....+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 47877774221 1223488999999999999999999998 99999999999999 67899999999999
Q ss_pred ccccCCCc--ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCccccccccccc-----ccchHHHHHH
Q 003046 677 KFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGAN-----CRNIVQWAKL 748 (854)
Q Consensus 677 ~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~-----~~~l~~~~~~ 748 (854)
+....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..........
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 86543221 22234579999999999987 4589999999999999999999999975432100 0011111111
Q ss_pred hhhcC---Cccccc------------CCcccCcCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 749 HIESG---DIQGII------------DPSLLDEYDI---------QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 749 ~~~~~---~~~~~i------------d~~l~~~~~~---------~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+... ....+. .......... .....+.+|+.+|++.||++|||+.|+++|
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11100 000000 0000000000 012357899999999999999999999987
No 226
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7e-36 Score=323.02 Aligned_cols=250 Identities=24% Similarity=0.350 Sum_probs=189.2
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee------------
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------------ 593 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~------------ 593 (854)
.+.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|+.++++++||||+++++++..
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 3456789999999999999976 7899999998643 2334678899999999999999999998865
Q ss_pred -cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEE
Q 003046 594 -EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 594 -~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~D 672 (854)
.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred cCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 4567999999999999999963 234577888999999999999999998 999999999999999999999999
Q ss_pred ecccccccCCC-------------cceeecccccccccCccccccC-cCCCcchhhhHHHHHHHHHhCCccccccccccc
Q 003046 673 FGLSKFAVDGA-------------SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGAN 738 (854)
Q Consensus 673 FGla~~~~~~~-------------~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~ 738 (854)
||+++...... ........||+.|+|||.+.+. .++.++|||||||++|||++ ||.... .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---~ 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---E 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---H
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---h
Confidence 99997654221 1122344689999999999864 78999999999999999998 443211 0
Q ss_pred ccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 739 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 739 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
...+... +.... ..+...........+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~----~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 RVNILKK----LRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHH----HHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHh----ccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 0111111 11111 111112222333457899999999999999999999986
No 227
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.6e-36 Score=338.74 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=179.5
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeec------CeEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~------~~~~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++... ...+
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 445688999999999999875 68899999986532 23356678999999999999999999998654 5679
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+|+|++ +++|.+++.. ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 111 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp EEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 999999 6899888742 4689999999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.. ..... ..+
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~----~~g~p-~~~ 252 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR----LVGTP-GAE 252 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH----HHCSC-CHH
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH----HhCCC-CHH
Confidence 4322 233568999999999987 6789999999999999999999999976542111111111 10000 000
Q ss_pred ccCC-----------cc--cCcCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IIDP-----------SL--LDEYDI-----QSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~-----------~l--~~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.+.. .+ ...... .....+.+|+.+|++.||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 00 000010 112457899999999999999999999987
No 228
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-36 Score=331.32 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=191.9
Q ss_pred HHhhccccccCcEEEEEEEECCCcEEEEEEEecCC--ccchhchHHHHHHhhhcC--CCceeeEeeeeeecCeEEEEEEe
Q 003046 528 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYEF 603 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~~~lV~e~ 603 (854)
|.+.+.||+|+||.||+|...+++.||||++.... ......+.+|++++.+++ ||||+++++++...+..++|||
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 108 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 108 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-
Confidence 45578999999999999999889999999997543 233467889999999997 5999999999999999999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCC
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 683 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~ 683 (854)
+.+++|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+|||+++ +.+||+|||+++......
T Consensus 109 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 109 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 668899999853 34688899999999999999999998 9999999999999964 899999999998654332
Q ss_pred cc-eeecccccccccCcccccc-----------CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhh
Q 003046 684 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 751 (854)
Q Consensus 684 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~ 751 (854)
.. ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..... -.........
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~~~ 254 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAIID 254 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHC
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------HHHHHHHHHh
Confidence 22 2234468999999999875 4678899999999999999999999965431 1111111111
Q ss_pred cCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003046 752 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 800 (854)
Q Consensus 752 ~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L 800 (854)
.. .....+......+.+++.+|++.+|++||++.|++++-
T Consensus 255 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 255 PN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp TT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cc---------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11 11111111124578999999999999999999999863
No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.6e-36 Score=326.64 Aligned_cols=262 Identities=21% Similarity=0.263 Sum_probs=190.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeee--------------
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-------------- 592 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-------------- 592 (854)
|.+.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 345688999999999999987 48999999998666555678899999999999999999999873
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc-CCCcEEEE
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVS 671 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~~kL~ 671 (854)
.....++||||++ |+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999998 69999884 24588889999999999999999998 999999999999997 56799999
Q ss_pred EecccccccCCCc--ceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHH--
Q 003046 672 DFGLSKFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-- 746 (854)
Q Consensus 672 DFGla~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~-- 746 (854)
|||+++....... .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999986543221 12233457999999998875 678999999999999999999999997654221111111100
Q ss_pred -----HHhhhcCCcccccCCccc-C-----cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 747 -----KLHIESGDIQGIIDPSLL-D-----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 747 -----~~~~~~~~~~~~id~~l~-~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
..... ..+...+..... . .........+.+++.+|++.||++||++.|+++|
T Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 244 VHEEDRQELL-SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCHHHHHHHH-TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Cchhhhhhhh-hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 000000000000 0 0001123468899999999999999999999875
No 230
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8.5e-37 Score=338.60 Aligned_cols=259 Identities=22% Similarity=0.271 Sum_probs=194.2
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeec-----CeEEEE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVLV 600 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----~~~~lV 600 (854)
+.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ...++|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence 345688999999999999987 68899999996443 23345678999999999999999999988754 678999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||+. |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 93 QELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp ECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99997 689888842 4688999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCcc---------eeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhh
Q 003046 681 DGASH---------VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 750 (854)
Q Consensus 681 ~~~~~---------~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~ 750 (854)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~ 239 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ----LLLIFGII 239 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHH
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHh
Confidence 32211 1123468999999998765 6789999999999999999999999976542111 11111111
Q ss_pred hcCC----cccccCCc-------c--cCcC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 751 ESGD----IQGIIDPS-------L--LDEY-----DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 751 ~~~~----~~~~id~~-------l--~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ...+..+. + .... .......+.+++.+|++.||++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 00000000 0 0000 01123457899999999999999999999885
No 231
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.5e-36 Score=321.35 Aligned_cols=252 Identities=27% Similarity=0.370 Sum_probs=200.8
Q ss_pred HHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEE
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV 600 (854)
....|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3446667899999999999999986 68999999997543 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC---CcEEEEEecccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSK 677 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~---~~~kL~DFGla~ 677 (854)
+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999988843 34688999999999999999999998 99999999999999764 479999999997
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
....... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... .+.. .+..+....
T Consensus 173 ~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~----~~~~~~~~~ 241 (287)
T 2wei_A 173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILK----RVETGKYAF 241 (287)
T ss_dssp TBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH----HHHHCCCCC
T ss_pred eecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH----HHHH----HHHcCCCCC
Confidence 6543322 223458999999998865 4899999999999999999999999765411 1111 111221110
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+....... ...+.+++.+|++.+|++|||+.|++++
T Consensus 242 --~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 --DLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --CSGGGTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --Cchhhhhc----CHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00001112 2357899999999999999999999985
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6.4e-36 Score=334.50 Aligned_cols=258 Identities=20% Similarity=0.289 Sum_probs=192.6
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCeE------E
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS------V 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~------~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+.. +
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 445688999999999999876 689999999975432 2246788999999999999999999999877654 9
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||+. ++|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 124 lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 9999997 68888772 3488999999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhc--CCc
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES--GDI 755 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~--~~~ 755 (854)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.........+ ..+
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 269 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 269 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHh
Confidence 4322 234568999999999987 788999999999999999999999997654222211111100000000 000
Q ss_pred c--------cccCCcccC---cCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 756 Q--------GIIDPSLLD---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 756 ~--------~~id~~l~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
. ..+...... .........+.+++.+|++.||++|||+.|+++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 000000000 0001123468899999999999999999999986
No 233
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.3e-35 Score=326.18 Aligned_cols=262 Identities=20% Similarity=0.266 Sum_probs=199.2
Q ss_pred HHHhhccccccCcEEEEEEEE-C-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCc------eeeEeeeeeecCeEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKL-K-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGRSV 598 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~-~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~g~~~~~~~~~ 598 (854)
.|.+.+.||+|+||.||+|.. . +++.||||+++.. ......+.+|+++++.++|++ ++++++++...+..+
T Consensus 15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 455678999999999999987 3 6889999998643 233466888999999997654 999999999999999
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC--------------
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------------- 664 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-------------- 664 (854)
+||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 94 lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 999999 88999998542 224578899999999999999999998 9999999999999987
Q ss_pred -----CCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccc
Q 003046 665 -----HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 739 (854)
Q Consensus 665 -----~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~ 739 (854)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 678999999999764332 23346899999999999999999999999999999999999999765422111
Q ss_pred cchHHHHHH----hhhcCCcccccC--------------------Ccc--cCcCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 003046 740 RNIVQWAKL----HIESGDIQGIID--------------------PSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPSI 793 (854)
Q Consensus 740 ~~l~~~~~~----~~~~~~~~~~id--------------------~~l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm 793 (854)
..+...... ............ ..+ ...........+.+++.+|++.||++|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111100000 000000000000 000 001123445678999999999999999999
Q ss_pred HHHHHH
Q 003046 794 SEVLKD 799 (854)
Q Consensus 794 ~eV~~~ 799 (854)
.||++|
T Consensus 324 ~ell~h 329 (339)
T 1z57_A 324 REALKH 329 (339)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999876
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-35 Score=330.79 Aligned_cols=199 Identities=25% Similarity=0.299 Sum_probs=166.9
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-CC-----ceeeEeeeeeecCeEEE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HR-----NLVQFLGYCQEEGRSVL 599 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-Hp-----nIv~l~g~~~~~~~~~l 599 (854)
.|.+.+.||+|+||+||+|... +++.||||+++.. .....++..|+.+++.++ |+ +|+++++++...+..++
T Consensus 55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 133 (382)
T 2vx3_A 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL 133 (382)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence 3556789999999999999876 6789999999743 223456778888888885 44 49999999999999999
Q ss_pred EEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc--CCCcEEEEEecccc
Q 003046 600 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KHMRAKVSDFGLSK 677 (854)
Q Consensus 600 V~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~--~~~~~kL~DFGla~ 677 (854)
||||++ |+|.+++... ....+++..+..++.|++.||.|||+. ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 134 v~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 134 VFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 999996 5999998643 224588999999999999999999952 12899999999999995 47889999999998
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccc
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 734 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~ 734 (854)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 65432 233568999999999999999999999999999999999999998654
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.2e-35 Score=339.39 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=185.7
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
.+.||+|+||+||.+...+|+.||||++... ....+.+|+++++++ +||||+++++++..++..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 5789999999998776678999999998643 234578899999886 89999999999999999999999996 699
Q ss_pred HHhhccccccccc---ccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCC-------------CcEEEEEe
Q 003046 610 KEHLYGTLTHEQR---INWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-------------MRAKVSDF 673 (854)
Q Consensus 610 ~~~L~~~~~~~~~---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~-------------~~~kL~DF 673 (854)
.+++......... ..+..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999653221111 23445678999999999999998 99999999999999754 48999999
Q ss_pred cccccccCCCcc---eeecccccccccCcccccc-------CcCCCcchhhhHHHHHHHHHh-CCcccccccccccccch
Q 003046 674 GLSKFAVDGASH---VSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 742 (854)
Q Consensus 674 Gla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l 742 (854)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||...... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~ 247 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-----E 247 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----H
Confidence 999876543322 1234569999999999975 678999999999999999999 99999654311 1
Q ss_pred HHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 743 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 743 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
......... . +.+...........+.+++.+|++.||++|||+.||++|
T Consensus 248 ~~i~~~~~~---~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 SNIIRGIFS---L-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHHHHTCCC---C-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHhcCCCC---c-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 111111100 0 011111234455678999999999999999999999975
No 236
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=327.49 Aligned_cols=244 Identities=25% Similarity=0.390 Sum_probs=190.7
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc------cchhchHHHHHHhhhc----CCCceeeEeee
Q 003046 522 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY------QGKREFTNEVTLLSRI----HHRNLVQFLGY 590 (854)
Q Consensus 522 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l----~HpnIv~l~g~ 590 (854)
+.....|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344556777899999999999999875 688999999975432 2334577899999999 89999999999
Q ss_pred eeecCeEEEEEEe-cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc-CCCcE
Q 003046 591 CQEEGRSVLVYEF-MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRA 668 (854)
Q Consensus 591 ~~~~~~~~lV~e~-~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~~ 668 (854)
+...+..++|+|+ +.+++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 789999999853 34689999999999999999999998 999999999999999 88999
Q ss_pred EEEEecccccccCCCcceeecccccccccCccccccCcCC-CcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH
Q 003046 669 KVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 747 (854)
Q Consensus 669 kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~ 747 (854)
||+|||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||.... .+.
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~---- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EIL---- 246 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHH----
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHh----
Confidence 999999998654332 2344689999999999876664 48999999999999999999996532 110
Q ss_pred HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 748 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... .+.... ...+.+++.+|++.+|++||++.|++++
T Consensus 247 ----~~~~------~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 ----EAEL------HFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----HTCC------CCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----hhcc------CCcccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0100 011112 2357889999999999999999999986
No 237
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.7e-36 Score=328.54 Aligned_cols=243 Identities=22% Similarity=0.376 Sum_probs=197.8
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc------chhchHHHHHHhhhcC--CCceeeEeeeeeecCeE
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRS 597 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~~ 597 (854)
.|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++ ||||+++++++...+..
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~ 123 (320)
T 3a99_A 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 123 (320)
T ss_dssp TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcE
Confidence 4556789999999999999875 6889999999765322 2356788999999996 59999999999999999
Q ss_pred EEEEEecCC-CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc-CCCcEEEEEecc
Q 003046 598 VLVYEFMHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFGL 675 (854)
Q Consensus 598 ~lV~e~~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~-~~~~~kL~DFGl 675 (854)
++|+|++.+ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+
T Consensus 124 ~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 124 VLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999986 899999853 45688999999999999999999998 999999999999999 789999999999
Q ss_pred cccccCCCcceeecccccccccCccccccCcC-CCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 676 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 676 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .+. .+.
T Consensus 197 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~--------~~~ 259 (320)
T 3a99_A 197 GALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EII--------RGQ 259 (320)
T ss_dssp CEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHH--------HCC
T ss_pred ccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhh--------ccc
Confidence 9865432 2233468999999999987665 678899999999999999999996532 000 011
Q ss_pred cccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHHH
Q 003046 755 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDA 803 (854)
Q Consensus 755 ~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~--L~~~ 803 (854)
. .+....+ ..+.+++.+|++.+|++||++.||+++ ++..
T Consensus 260 ~------~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 260 V------FFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300 (320)
T ss_dssp C------CCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred c------cccccCC----HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence 0 0111222 357899999999999999999999986 4444
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=328.47 Aligned_cols=255 Identities=21% Similarity=0.300 Sum_probs=191.7
Q ss_pred HHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc--cchhchHHHHHHhhhcCCCceeeEeeeeeecCe------EE
Q 003046 528 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------SV 598 (854)
Q Consensus 528 ~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~------~~ 598 (854)
|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+. .+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 345678999999999999886 689999999975422 224568899999999999999999999977654 49
Q ss_pred EEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 599 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 599 lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+||||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 106 lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 9999997 58887763 2488899999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCcceeecccccccccCcccccc-CcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHH----------
Q 003046 679 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK---------- 747 (854)
Q Consensus 679 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~---------- 747 (854)
.... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+.....
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4322 233468999999999887 6789999999999999999999999976542211111111000
Q ss_pred ------HhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 748 ------LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 748 ------~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... .+.....+.+. .........+.+++.+|++.||++|||+.|+++|
T Consensus 252 ~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 252 NDKAAKSYIQ--SLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp SCHHHHHHHH--TSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhHHHHHHHH--hCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 00000000000 1111223468899999999999999999999876
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=9.9e-36 Score=326.67 Aligned_cols=254 Identities=26% Similarity=0.329 Sum_probs=175.1
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-cchhchHHHHH-HhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVT-LLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|... +++.||||++..... ....++..|+. +++.++||||+++++++...+..++||||++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~ 104 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS 104 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC
Confidence 34678999999999999986 689999999976532 23344555655 7778899999999999999999999999998
Q ss_pred CCCHHHhhcccc-cccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 606 NGTLKEHLYGTL-THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 606 ~gsL~~~L~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
+ +|.+++.... .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++......
T Consensus 105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 180 (327)
T 3aln_A 105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI- 180 (327)
T ss_dssp E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc-
Confidence 5 8877774321 1245688999999999999999999985 289999999999999999999999999997654322
Q ss_pred ceeecccccccccCcccc----ccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccC
Q 003046 685 HVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 760 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~----~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 760 (854)
......||+.|+|||.+ .+..++.++|||||||++|||++|+.||...... .+.... ...+. .
T Consensus 181 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~-~~~~~-----~ 247 (327)
T 3aln_A 181 -AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV------FDQLTQ-VVKGD-----P 247 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CC-CCCSC-----C
T ss_pred -ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH------HHHHHH-HhcCC-----C
Confidence 12233689999999998 4567899999999999999999999999754310 000000 00011 0
Q ss_pred CcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 761 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 761 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
+.+...........+.+++.+|++.+|++||++.||+++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111111111123458899999999999999999999876
No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.5e-35 Score=331.07 Aligned_cols=263 Identities=20% Similarity=0.339 Sum_probs=196.4
Q ss_pred HHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-----------CCceeeEeeeeeec
Q 003046 527 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----------HRNLVQFLGYCQEE 594 (854)
Q Consensus 527 ~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----------HpnIv~l~g~~~~~ 594 (854)
.|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|+.++++++ ||||+++++++...
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 4556789999999999999875 6889999998743 233566788999999886 89999999999765
Q ss_pred C----eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEc------C
Q 003046 595 G----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD------K 664 (854)
Q Consensus 595 ~----~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~------~ 664 (854)
+ ..++|||++ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++ .
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 4 789999999 88999998543 2345889999999999999999999952 899999999999995 3
Q ss_pred CCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc---ccc
Q 003046 665 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN---CRN 741 (854)
Q Consensus 665 ~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~---~~~ 741 (854)
.+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 458999999999765432 2334689999999999999999999999999999999999999975442111 111
Q ss_pred hHHHHHHh-----------------hhcCCc-ccccCCcc---------cCcCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 003046 742 IVQWAKLH-----------------IESGDI-QGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSIS 794 (854)
Q Consensus 742 l~~~~~~~-----------------~~~~~~-~~~id~~l---------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~ 794 (854)
+....... +..... ..+..... ....+......+.+++.+|++.||++|||+.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 11111100 000000 00000000 0123456677899999999999999999999
Q ss_pred HHHHH
Q 003046 795 EVLKD 799 (854)
Q Consensus 795 eV~~~ 799 (854)
||++|
T Consensus 330 ell~h 334 (373)
T 1q8y_A 330 GLVNH 334 (373)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99886
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.3e-35 Score=325.45 Aligned_cols=247 Identities=20% Similarity=0.266 Sum_probs=167.9
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCceeeEeeeeee----cCeEEEEEEecC
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVYEFMH 605 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----~~~~~lV~e~~~ 605 (854)
.+.||+|+||.||+|... +++.||||++... .....+....++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 456999999999999987 6899999998643 1222223344566799999999999876 455899999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEEEEecccccccCC
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL~DFGla~~~~~~ 682 (854)
+|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 110 GGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999999643 234689999999999999999999998 9999999999999986 455999999999755432
Q ss_pred CcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCc
Q 003046 683 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 762 (854)
Q Consensus 683 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 762 (854)
......||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...+.. . ....
T Consensus 185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~-~-~~~~ 255 (336)
T 3fhr_A 185 ---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR----IRLGQY-G-FPNP 255 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------C-CCTT
T ss_pred ---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh----hhcccc-c-cCch
Confidence 223446899999999999889999999999999999999999999765422111111110 100000 0 0000
Q ss_pred ccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 763 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 763 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
... .....+.+++.+|++.+|++|||+.|+++|
T Consensus 256 ~~~----~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 EWS----EVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TST----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011 123457899999999999999999999985
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.3e-35 Score=326.65 Aligned_cols=263 Identities=20% Similarity=0.248 Sum_probs=197.5
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CC-cEEEEEEEecCCccchhchHHHHHHhhhcCCCc------eeeEeeeeeecCeE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DG-KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~-~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~g~~~~~~~~ 597 (854)
..|.+.+.||+|+||.||+|... ++ +.||||+++.. ......+.+|+.++++++|++ ++.+.+++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 34566789999999999999875 34 68999999743 233567888999999998766 89999999999999
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEE---------------
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL--------------- 662 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl--------------- 662 (854)
++||||+ +++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 9999999 66777776432 234688999999999999999999998 99999999999999
Q ss_pred ----cCCCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccccccccc
Q 003046 663 ----DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 738 (854)
Q Consensus 663 ----~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~ 738 (854)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 67889999999999764332 2334699999999999999999999999999999999999999976542111
Q ss_pred ccchHHHHHH----hhhcCCcccc-cCCc-------------------c--cCcCCHHHHHHHHHHHHHccCCCCCCCCC
Q 003046 739 CRNIVQWAKL----HIESGDIQGI-IDPS-------------------L--LDEYDIQSMWKIEEKALMCVLPHGHMRPS 792 (854)
Q Consensus 739 ~~~l~~~~~~----~~~~~~~~~~-id~~-------------------l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs 792 (854)
...+...... .......... .... + .......+...+.+++.+|++.||++|||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 327 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT 327 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence 1111100000 0000000000 0000 0 00112233457889999999999999999
Q ss_pred HHHHHHH
Q 003046 793 ISEVLKD 799 (854)
Q Consensus 793 m~eV~~~ 799 (854)
+.|+++|
T Consensus 328 ~~e~l~h 334 (355)
T 2eu9_A 328 LAEALLH 334 (355)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999976
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=333.74 Aligned_cols=246 Identities=24% Similarity=0.348 Sum_probs=184.1
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEEEEecCCC
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
.+.+.||+|+||+||.....+++.||||++.... ...+.+|+++|+++ +||||+++++++.+.+..++||||+. |
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 3457899999999766556679999999986533 34577899999999 79999999999999999999999996 5
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC-----CCcEEEEEecccccccCC
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----HMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~-----~~~~kL~DFGla~~~~~~ 682 (854)
+|.+++... ...+.+..++.++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 103 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 103 TLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp EHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred CHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 999998643 22344556678999999999999998 9999999999999953 346889999999866433
Q ss_pred Cc--ceeecccccccccCccccc---cCcCCCcchhhhHHHHHHHHHh-CCcccccccccccccchHHHHHHhhhcCCcc
Q 003046 683 AS--HVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQ 756 (854)
Q Consensus 683 ~~--~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwS~Gvvl~ellt-G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~ 756 (854)
.. .......||++|+|||++. ...++.++|||||||++|||++ |..||..... .. ..........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-----~~---~~~~~~~~~~- 247 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-----RQ---ANILLGACSL- 247 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-----HH---HHHHTTCCCC-
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-----HH---HHHHhccCCc-
Confidence 22 2234456999999999997 4567889999999999999999 9999864331 11 1111111111
Q ss_pred cccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 757 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 757 ~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.... ........+.+++.+|++.||++|||+.||++|
T Consensus 248 ~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 DCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 1111 112233457899999999999999999999965
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=316.11 Aligned_cols=248 Identities=24% Similarity=0.301 Sum_probs=175.2
Q ss_pred HhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc-c-hhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEEecC
Q 003046 529 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-G-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 605 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~-~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e~~~ 605 (854)
.+.+.||+|+||.||+|... +++.||||++...... . .+.+.++..+++.++||||+++++++...+..++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 45678999999999999986 6899999999755322 1 233445556788889999999999999999999999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHh-CCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCc
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 684 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~ 684 (854)
++.+..+... ....+++..+..++.|++.||.|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 ~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 107 GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 4455544421 24568899999999999999999998 4 89999999999999999999999999997554322
Q ss_pred ceeecccccccccCccccc-----cCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccccc
Q 003046 685 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 759 (854)
Q Consensus 685 ~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 759 (854)
......||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ............ .. +
T Consensus 180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~-~~-~ 250 (318)
T 2dyl_A 180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQEEP-PL-L 250 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHHSCC-CC-C
T ss_pred -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhccCC-CC-C
Confidence 223346899999999994 456889999999999999999999999753311 111111111111 00 0
Q ss_pred CCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 760 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 760 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. .... ...+.+++.+|++.+|.+||++.||+++
T Consensus 251 ~~--~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 251 PG--HMGF----SGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CS--SSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred Cc--cCCC----CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 0111 2357899999999999999999999886
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-34 Score=346.77 Aligned_cols=240 Identities=19% Similarity=0.281 Sum_probs=192.7
Q ss_pred HHHHhhccccccCcEEEEEEEEC--CCcEEEEEEEecCC-ccchhchHHHHHHhhhcCCCceeeEeeeeeecCe-----E
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-----S 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~-----~ 597 (854)
..|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 34566789999999999999986 58999999986442 2334568899999999999999999999987765 7
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
++||||+++++|.+++.. .+++..++.++.||+.||.|||+. +|+||||||+|||++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 999999999999887632 689999999999999999999998 99999999999999986 89999999998
Q ss_pred cccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCccc
Q 003046 678 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 757 (854)
Q Consensus 678 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~ 757 (854)
..... ....||++|+|||++.+.. +.++|||||||++|||++|..||.........
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------ 285 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------ 285 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc------------------
Confidence 65432 3346999999999987654 88999999999999999999888653311100
Q ss_pred ccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHHHH
Q 003046 758 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIV 805 (854)
Q Consensus 758 ~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-sm~eV~~~L~~~~~ 805 (854)
...........+.+++.+|++.+|++|| +++++.+.|..++.
T Consensus 286 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 ------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0000112234678999999999999999 56777777777654
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.7e-35 Score=344.41 Aligned_cols=267 Identities=23% Similarity=0.330 Sum_probs=200.5
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecC-CccchhchHHHHHHhhhcCCCceeeEeeeeee------cCeE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRS 597 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~------~~~~ 597 (854)
..|.+.+.||+|+||.||+|... +|+.||||+++.. .......+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 35677899999999999999875 6899999998754 23345678899999999999999999998765 6678
Q ss_pred EEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCc---EEEEEec
Q 003046 598 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFG 674 (854)
Q Consensus 598 ~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~---~kL~DFG 674 (854)
++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 99999999999999996432 234588899999999999999999998 9999999999999997765 9999999
Q ss_pred ccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCC
Q 003046 675 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 754 (854)
Q Consensus 675 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~ 754 (854)
+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...|.........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~------~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ------PVQWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH------HHHSSTTCC----
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc------hhhhhhhhhcccc
Confidence 998654432 22345699999999999999999999999999999999999999965431 1111111100000
Q ss_pred c----ccccCCc------c--cCcCCHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHHHH
Q 003046 755 I----QGIIDPS------L--LDEYDIQSMWKIEEKALMCVLPHGHMRPSISE-----VLKDIQDAI 804 (854)
Q Consensus 755 ~----~~~id~~------l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~e-----V~~~L~~~~ 804 (854)
. .+..... + ...........+.+++..|++.||++|||+.| ..+.++.++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 0 0000000 0 11223345667899999999999999999988 445555544
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.5e-34 Score=308.61 Aligned_cols=232 Identities=15% Similarity=0.138 Sum_probs=180.9
Q ss_pred HHHHhhccccccCcEEEEEEEEC-CCcEEEEEEEecCCcc---chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEE
Q 003046 526 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 526 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~ 601 (854)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.++.+++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 34667789999999999999987 4899999999765332 2367889999999999999999999999999999999
Q ss_pred EecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccC
Q 003046 602 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 602 e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~ 681 (854)
||+++++|.+++... ....++..++.|++.||+|||+. +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999998431 24456788999999999999998 99999999999999999999997443
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
|++| ++.++|||||||++|||++|+.||.............. .. .+.. ..
T Consensus 175 --------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~----~~-~~~~---~~- 224 (286)
T 3uqc_A 175 --------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER----DT-AGQP---IE- 224 (286)
T ss_dssp --------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB----CT-TSCB---CC-
T ss_pred --------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH----Hh-ccCC---CC-
Confidence 3433 67899999999999999999999986552211100000 00 0000 00
Q ss_pred cccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHHHHH
Q 003046 762 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 806 (854)
Q Consensus 762 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~L~~~~~~ 806 (854)
...........+.+++.+|++.||++| |+.|+++.|+++...
T Consensus 225 --~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 225 --PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp --HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred --hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 000011122458899999999999999 999999999987654
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.9e-34 Score=323.84 Aligned_cols=239 Identities=13% Similarity=0.099 Sum_probs=178.8
Q ss_pred hhccccccCcEEEEEEEEC-CCcEEEEEEEecCCc---cchhchHHHHHHhhhcCC-Cceee------------------
Q 003046 530 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHH-RNLVQ------------------ 586 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H-pnIv~------------------ 586 (854)
+.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|...
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 3578999999999999965 689999999874322 235678899999999977 32211
Q ss_pred ---Eeeeeee-----cCeEEEEEEecCCCCHHHhhccc---ccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCC
Q 003046 587 ---FLGYCQE-----EGRSVLVYEFMHNGTLKEHLYGT---LTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDL 655 (854)
Q Consensus 587 ---l~g~~~~-----~~~~~lV~e~~~~gsL~~~L~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDI 655 (854)
+..++.. ....+++|+++ +++|.+++... ......+++..++.++.|+++||+|||+. +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111111 12356777755 68999888421 22355688999999999999999999998 9999999
Q ss_pred CCCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCcccc----------ccCcCCCcchhhhHHHHHHHHHh
Q 003046 656 KSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYY----------ISQQLTDKSDVYSFGVILLELIS 725 (854)
Q Consensus 656 kp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~----------~~~~~s~~sDVwS~Gvvl~ellt 725 (854)
||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|||++
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999998754322 344567 999999999 55668889999999999999999
Q ss_pred CCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 726 GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 726 G~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
|+.||......+.... ++... ...+ ..+.+++.+|++.+|++||++.|++++
T Consensus 313 g~~Pf~~~~~~~~~~~----------------~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 313 ADLPNTDDAALGGSEW----------------IFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp SSCCCCTTGGGSCSGG----------------GGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCcchhhhHHH----------------HHhhc--ccCC----HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999976542221111 11100 1122 458899999999999999999998765
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.8e-34 Score=314.66 Aligned_cols=245 Identities=18% Similarity=0.191 Sum_probs=184.5
Q ss_pred HHHHHHhhccccccCcEEEEEEEECCCcEEEEEEEecCCc--------cchhchHHHHHHhhhcC---------CCceee
Q 003046 524 EDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIH---------HRNLVQ 586 (854)
Q Consensus 524 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~---------HpnIv~ 586 (854)
....|.+.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+.++++++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 345677889999999999999998 589999999976532 12367889999999886 777777
Q ss_pred Eeeee-----------------ee-------------cCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHH
Q 003046 587 FLGYC-----------------QE-------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAA 636 (854)
Q Consensus 587 l~g~~-----------------~~-------------~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia 636 (854)
+.+.+ .. .+..++||||+++|++.+.+. ...+++..+..++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHH
Confidence 76653 22 678999999999997766663 24578999999999999
Q ss_pred HHHHHHH-hCCCCceeccCCCCCCeEEcCCC--------------------cEEEEEecccccccCCCcceeeccccccc
Q 003046 637 KGIEYLH-TGCVPAIIHRDLKSSNILLDKHM--------------------RAKVSDFGLSKFAVDGASHVSSIVRGTVG 695 (854)
Q Consensus 637 ~gL~yLH-~~~~~~ivHrDIkp~NILl~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~ 695 (854)
.||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 88 999999999999999887 9999999999865432 2369999
Q ss_pred ccCccccccCcCCCcchhhhHHHH-HHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCCcccCcCCHHHHHH
Q 003046 696 YLDPEYYISQQLTDKSDVYSFGVI-LLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWK 774 (854)
Q Consensus 696 Y~aPE~~~~~~~s~~sDVwS~Gvv-l~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~~ 774 (854)
|+|||++.+.. +.++||||+|++ .+++++|..||...... ..+.+ ........ ...............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~---~~~~~~~~----~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTD---KMLKQMTF----KTKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHH---HHHHTCCC----SSCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHH---hhhhhhcc----CcccchhhhhhcCHH
Confidence 99999998766 889999998777 78899999998542100 00111 11111000 011111122345667
Q ss_pred HHHHHHHccCCCCCCCCCHHHHH-HH
Q 003046 775 IEEKALMCVLPHGHMRPSISEVL-KD 799 (854)
Q Consensus 775 l~~l~~~Cl~~~P~~RPsm~eV~-~~ 799 (854)
+.+++.+|++.+ |+.|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999976 899888 54
No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.4e-33 Score=299.97 Aligned_cols=222 Identities=22% Similarity=0.275 Sum_probs=174.1
Q ss_pred hccccccCcEEEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHh-hhcCCCceeeEeeeeee----cCeEEEEEEec
Q 003046 531 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLL-SRIHHRNLVQFLGYCQE----EGRSVLVYEFM 604 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l-~~l~HpnIv~l~g~~~~----~~~~~lV~e~~ 604 (854)
.+.||+|+||.||+|... +++.||||++.. ...+.+|++++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 367999999999999885 689999999863 34577888888 55689999999999977 67789999999
Q ss_pred CCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcC---CCcEEEEEecccccccC
Q 003046 605 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 681 (854)
Q Consensus 605 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~---~~~~kL~DFGla~~~~~ 681 (854)
++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++....
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 98 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999999643 234689999999999999999999998 9999999999999998 7899999999986432
Q ss_pred CCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccccccccccccchHHHHHHhhhcCCcccccCC
Q 003046 682 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 761 (854)
Q Consensus 682 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 761 (854)
+..++.++|||||||++|||++|+.||...........+ ...+...
T Consensus 172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~------------~~~~~~~ 217 (299)
T 3m2w_A 172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM------------KTRIRMG 217 (299)
T ss_dssp ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS------------CCSSCTT
T ss_pred ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH------------HHHHhhc
Confidence 234678999999999999999999999754411100000 0000000
Q ss_pred cccCcCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003046 762 SLLDEYD----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 799 (854)
Q Consensus 762 ~l~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPsm~eV~~~ 799 (854)
.. ..+ ......+.+++.+|++.+|++|||+.|+++|
T Consensus 218 ~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 218 QY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 011 1123468899999999999999999999986
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3e-28 Score=286.38 Aligned_cols=186 Identities=16% Similarity=0.107 Sum_probs=130.8
Q ss_pred cccccCcEEEEEEEE-CCCcEEEEEEEecCCc----------cchhchHHHHHHhhhc-CCCceeeEeeeeeecCeEEEE
Q 003046 533 KIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSY----------QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~----------~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~lV 600 (854)
..+.|++|.+..++. --|+.+|||++..... ...++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456777776666532 2588999999975421 1235689999999999 799999999999999999999
Q ss_pred EEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEeccccccc
Q 003046 601 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 680 (854)
Q Consensus 601 ~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~ 680 (854)
|||++|++|.+.|.. ...++. .+|+.||+.||+|||++ |||||||||+||||+.++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999953 344544 35899999999999999 99999999999999999999999999998654
Q ss_pred CCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccc
Q 003046 681 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 681 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf 730 (854)
... .......||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 391 ~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 432 23344679999999999875 4677899999999999888776654
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=4.3e-25 Score=258.06 Aligned_cols=182 Identities=18% Similarity=0.227 Sum_probs=145.5
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCcc--------chhchHHHHHHhhhcCCCceeeEeeeeeecCeEEEEEE
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~lV~e 602 (854)
.+.||+|+||.||+|... ++.+++|+....... ..+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999554 788999987543221 12447899999999999999976666667778899999
Q ss_pred ecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCC
Q 003046 603 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 682 (854)
Q Consensus 603 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~ 682 (854)
|+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 420 YINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp CCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred CCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999853 457899999999999998 9999999999999999 9999999999876543
Q ss_pred Ccce------eecccccccccCcccccc--CcCCCcchhhhHHHHHHHHHhCCccc
Q 003046 683 ASHV------SSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAI 730 (854)
Q Consensus 683 ~~~~------~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwS~Gvvl~elltG~~pf 730 (854)
.... .....||+.|||||++.. ..|+...|+||..+-..+-+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2211 234579999999999987 67888899999998888888777665
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=1e-21 Score=210.61 Aligned_cols=141 Identities=17% Similarity=0.101 Sum_probs=114.0
Q ss_pred hccccccCcEEEEEEEECCCcEEEEEEEecCCc------------------cchhchHHHHHHhhhcCCCceeeEeeeee
Q 003046 531 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY------------------QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~------------------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~ 592 (854)
.+.||+|+||.||+|.+.+|+.||||+++.... .....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 488999999999999997799999999964321 12345889999999999 4 55555544
Q ss_pred ecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEE
Q 003046 593 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 672 (854)
Q Consensus 593 ~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~D 672 (854)
. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ ++.+||+|
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEE
Confidence 3 45699999999999988 421 12346999999999999998 999999999999999 99999999
Q ss_pred ecccccccCCCcceeecccccccccCcccccc
Q 003046 673 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS 704 (854)
Q Consensus 673 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 704 (854)
||+|+. +..|+|||++..
T Consensus 236 FG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 236 FPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp CTTCEE--------------TTSTTHHHHHHH
T ss_pred CCCCeE--------------CCCCCHHHHHHH
Confidence 999863 445789998753
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.74 E-value=7.6e-19 Score=214.69 Aligned_cols=114 Identities=29% Similarity=0.443 Sum_probs=106.7
Q ss_pred CCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCce
Q 003046 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 416 (854)
..+++|+.|+|++|+|+|.+|.+|++|++|+.|+|++|+|+|.+|. |++|++|+.|||++|+|+|.+|..+++|++|+.
T Consensus 629 ~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 708 (768)
T 3rgz_A 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708 (768)
T ss_dssp SSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSE
T ss_pred hccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE
Confidence 3467899999999999999999999999999999999999998886 999999999999999999999999999999999
Q ss_pred eecccccccccccccc-ccccccccccCCcccccCC
Q 003046 417 LYVQNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 417 L~l~~N~l~g~ip~~l-~~~l~~l~~~~n~~~~~~~ 451 (854)
|+|++|+|+|.||..- +..+..+.+.||+++|+.+
T Consensus 709 L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 709 IDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp EECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred EECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 9999999999999865 7778888999999999754
No 255
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=5.1e-18 Score=179.39 Aligned_cols=134 Identities=24% Similarity=0.263 Sum_probs=103.4
Q ss_pred hhccccccCcEEEEEEEE-CCCcE--EEEEEEecCCccc------------------------hhchHHHHHHhhhcCCC
Q 003046 530 LEKKIGSGGFGVVYYGKL-KDGKE--IAVKVLTSNSYQG------------------------KREFTNEVTLLSRIHHR 582 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~-~~~~~--vAvK~l~~~~~~~------------------------~~~~~~E~~~l~~l~Hp 582 (854)
+.+.||+|+||.||+|.. .+|+. ||||+++...... ...+.+|+.+|.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 357899999999999998 57888 9999975431110 12578899999999887
Q ss_pred ce--eeEeeeeeecCeEEEEEEecCC-C----CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHH-hCCCCceeccC
Q 003046 583 NL--VQFLGYCQEEGRSVLVYEFMHN-G----TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH-TGCVPAIIHRD 654 (854)
Q Consensus 583 nI--v~l~g~~~~~~~~~lV~e~~~~-g----sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrD 654 (854)
++ ...+++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 64 334432 356899999952 4 66655421 234567789999999999999 87 999999
Q ss_pred CCCCCeEEcCCCcEEEEEecccccc
Q 003046 655 LKSSNILLDKHMRAKVSDFGLSKFA 679 (854)
Q Consensus 655 Ikp~NILl~~~~~~kL~DFGla~~~ 679 (854)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.71 E-value=4e-18 Score=185.49 Aligned_cols=182 Identities=20% Similarity=0.182 Sum_probs=144.8
Q ss_pred cccceeeeecccCCCC-CCCcccchhhhceeccCCCCCccHHHHHHHHhhc-CCCCccCCCCCCCCCCCCCe-eEeCCCC
Q 003046 263 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLY-SSADWAQEGGDPCLPVPWSW-LQCNSDP 339 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s-~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~-~~~~~~~~~~dpc~~~~~~~-~~c~~~~ 339 (854)
.++.|+.|+|+.|.++ .+|..+..+..|+.|+++.|.+....+..+.++. .+..+... -| ...+ +.-....
T Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~---~N---~l~~~~~~~~~~ 196 (313)
T 1ogq_A 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS---RN---RLTGKIPPTFAN 196 (313)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECC---SS---EEEEECCGGGGG
T ss_pred CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECc---CC---eeeccCChHHhC
Confidence 3567888888888888 5666788888899999988887643444444443 33333111 01 0111 0111223
Q ss_pred CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++ |+.|+|++|+|++.+|..|.++++|+.|+|++|++++.+|.+..+++|+.|+|++|+|++.+|..|..+++|+.|+|
T Consensus 197 l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 275 (313)
T 1ogq_A 197 LN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275 (313)
T ss_dssp CC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEEC
T ss_pred Cc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEEC
Confidence 33 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccc-ccccccccccCCcccccCC
Q 003046 420 QNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 420 ~~N~l~g~ip~~l-~~~l~~l~~~~n~~~~~~~ 451 (854)
++|+|+|.+|..- ++++..+++.+|+.+|+.+
T Consensus 276 s~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 276 SFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 9999999999864 6788999999999999854
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.69 E-value=1.6e-17 Score=182.02 Aligned_cols=109 Identities=18% Similarity=0.278 Sum_probs=101.0
Q ss_pred CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
++++|+.|+|++|+|+ .+|..|+++++|++|+|++|+|++.++.+..+++|+.|+|++|++.+.+|..++.+++|+.|+
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 4679999999999999 899999999999999999999999888899999999999999999999999999999999999
Q ss_pred cccccccccccccc--ccccccccccCCcccc
Q 003046 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~ 448 (854)
|++|++.+.+|..+ +.+++.|++++|+..-
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred CCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 99999999999887 7788999999987654
No 258
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=1e-16 Score=172.47 Aligned_cols=156 Identities=23% Similarity=0.263 Sum_probs=128.5
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.+|+. ..+..|+.|+++.|.+.. + +-....+++|
T Consensus 54 l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~~-----------l-------------------~~~~~~l~~L 102 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQS-----------L-------------------PLLGQTLPAL 102 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCSS-----------C-------------------CCCTTTCTTC
T ss_pred CCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCCc-----------C-------------------chhhccCCCC
Confidence 45667777777777777665 667777777777776542 0 0012356799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 103 ~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence 9999999999977778899999999999999999998887 788999999999999999665567789999999999999
Q ss_pred ccccccccccc--cccccccccCCcccccCC
Q 003046 423 MLSGTVPSSLL--SKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 423 ~l~g~ip~~l~--~~l~~l~~~~n~~~~~~~ 451 (854)
+|+ .+|..++ ..++.+.+.+||+.|.+.
T Consensus 183 ~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 183 SLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred cCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 999 9999884 457899999999999863
No 259
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.68 E-value=3e-16 Score=164.92 Aligned_cols=156 Identities=19% Similarity=0.215 Sum_probs=133.6
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
..++.|+|+.|.++.++|. +..+..|+.|+++.|.+.. ..+- ....+++|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~~L 85 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-------------------LSAG----------VFDDLTEL 85 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-------------------cCHh----------HhccCCcC
Confidence 3678899999999999986 8999999999999998764 0110 12346799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..+..|..+++|++|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 86 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 165 (251)
T 3m19_A 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence 9999999999977778889999999999999999998887 789999999999999999777778999999999999999
Q ss_pred cccccccc-cc--ccccccccccCCcccccC
Q 003046 423 MLSGTVPS-SL--LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 423 ~l~g~ip~-~l--~~~l~~l~~~~n~~~~~~ 450 (854)
+|+ .+|. .+ +.+++.|++++|+..|..
T Consensus 166 ~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 166 QLQ-SVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred cCC-ccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 999 5554 44 567899999999998874
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.67 E-value=2.1e-16 Score=162.79 Aligned_cols=152 Identities=21% Similarity=0.218 Sum_probs=130.2
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
..+++..+.++.+|+.+. +.++.|+++.|.+... .+- ....+++|+.|+
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i-------------------~~~----------~~~~l~~L~~L~ 62 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVI-------------------PPG----------AFSPYKKLRRID 62 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEE-------------------CTT----------SSTTCTTCCEEE
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCc-------------------CHh----------HhhCCCCCCEEE
Confidence 346778999999998765 6899999999987641 000 123467999999
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|++|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 63 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 141 (220)
T 2v9t_B 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ- 141 (220)
T ss_dssp CCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-
T ss_pred CCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-
Confidence 999999988899999999999999999999998887 788999999999999999888999999999999999999999
Q ss_pred ccccc-c--ccccccccccCCcccccCC
Q 003046 427 TVPSS-L--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~ip~~-l--~~~l~~l~~~~n~~~~~~~ 451 (854)
.+|.. + +.+++.|++++|+..|.+.
T Consensus 142 ~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 142 TIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred EECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 55554 4 5678899999999999764
No 261
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.67 E-value=1.1e-16 Score=170.30 Aligned_cols=179 Identities=20% Similarity=0.136 Sum_probs=127.7
Q ss_pred ceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCCCe
Q 003046 266 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~-c~~~~~~~L 343 (854)
.++.|+|+.|.++.+|+ .+..+..|+.|+++.|.+.......+..+..+..+... . + ....+. .....+++|
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~-~--n---~l~~~~~~~~~~l~~L 111 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT-D--N---KLQALPIGVFDQLVNL 111 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC-S--S---CCCCCCTTTTTTCSSC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC-C--C---cCCcCCHhHcccccCC
Confidence 34555556666666655 35555666666665555443222222222222222110 0 0 001111 112456799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 112 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 112 AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 9999999999987778899999999999999999998887 889999999999999999777778999999999999999
Q ss_pred cccccccccc---ccccccccccCCcccccCC
Q 003046 423 MLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 423 ~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
+|+ .+|... +.+++.|++.+|+..|.+.
T Consensus 192 ~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 192 QLK-RVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cCC-cCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 999 677654 5678899999999999874
No 262
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.67 E-value=6.3e-17 Score=173.32 Aligned_cols=113 Identities=23% Similarity=0.323 Sum_probs=100.9
Q ss_pred CCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCce
Q 003046 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 416 (854)
..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.
T Consensus 126 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 126 RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred hCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccE
Confidence 4567999999999999976667799999999999999999998886 899999999999999999888999999999999
Q ss_pred eeccccccccccccc-c--ccccccccccCCcccccCC
Q 003046 417 LYVQNNMLSGTVPSS-L--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 417 L~l~~N~l~g~ip~~-l--~~~l~~l~~~~n~~~~~~~ 451 (854)
|+|++|+|++ +|.. + +.+++.|++++|+..|.+.
T Consensus 206 L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 206 LYLFANNLSA-LPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp EECCSSCCSC-CCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred eeCCCCcCCc-CCHHHcccCcccCEEeccCCCccCCCC
Confidence 9999999994 5544 3 6778999999999998764
No 263
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=1.3e-17 Score=192.61 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=98.3
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-------
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN------- 336 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~------- 336 (854)
++.|+.|+|+.|.++.++| +..+..|+.|+++.|.+..... ...+..+.. .-| .+.++.|.
T Consensus 57 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L---~~N---~l~~~~~~~l~~L~~ 124 (487)
T 3oja_A 57 FTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA---ANN---NISRVSCSRGQGKKN 124 (487)
T ss_dssp CTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC---CSS---CCCCEEECCCSSCEE
T ss_pred CCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC---cCC---cCCCCCccccCCCCE
Confidence 4567777777777777766 7777777777777776654110 011111110 001 12222221
Q ss_pred ---------------CCCCCCeeEEEecCCCCcccCCcccc-cCccCcEEeccCCcccccCCCCCCCCCccEEEcCCccc
Q 003046 337 ---------------SDPQPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQL 400 (854)
Q Consensus 337 ---------------~~~~~~L~~L~Ls~n~l~g~lp~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l 400 (854)
...+++|+.|+|++|+|++.+|..+. .|++|+.|+|++|+|++.+ .+..+++|+.|+|++|+|
T Consensus 125 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~-~~~~l~~L~~L~Ls~N~l 203 (487)
T 3oja_A 125 IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKL 203 (487)
T ss_dssp EECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCC
T ss_pred EECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc-ccccCCCCCEEECCCCCC
Confidence 12245566666666666655555554 4566666666666665552 233466666777777777
Q ss_pred CCCCCccccCCCCCceeecccccccccccccc--ccccccccccCCccccc
Q 003046 401 TGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHE 449 (854)
Q Consensus 401 ~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~~ 449 (854)
++ +|..+..+++|+.|+|++|+|+ .+|..+ +.++..|++++|+..|+
T Consensus 204 ~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 204 AF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCc
Confidence 64 4444666777777777777777 466655 45666777777776654
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.66 E-value=2e-16 Score=162.94 Aligned_cols=154 Identities=18% Similarity=0.187 Sum_probs=129.2
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
..++++.|.++.+|+.+.. .++.|+++.|.+... .+- -....+++|+.|+
T Consensus 14 ~~l~~s~n~l~~iP~~~~~--~~~~L~L~~N~l~~~-------------------~~~---------~~~~~l~~L~~L~ 63 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIPQ--YTAELRLNNNEFTVL-------------------EAT---------GIFKKLPQLRKIN 63 (220)
T ss_dssp TEEECCSSCCSSCCSCCCT--TCSEEECCSSCCCEE-------------------CCC---------CCGGGCTTCCEEE
T ss_pred CEeEeCCCCcccCccCCCC--CCCEEEcCCCcCCcc-------------------Cch---------hhhccCCCCCEEE
Confidence 3678899999999987643 457899999987641 000 0013467899999
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..|..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++
T Consensus 64 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 143 (220)
T 2v70_A 64 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT 143 (220)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC
T ss_pred CCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE
Confidence 999999987777999999999999999999998887 8999999999999999998889999999999999999999996
Q ss_pred cccccc--ccccccccccCCcccccCC
Q 003046 427 TVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~ip~~l--~~~l~~l~~~~n~~~~~~~ 451 (854)
..|..+ +.+++.|++++|+..|.+.
T Consensus 144 ~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 144 VAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp BCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 657666 6788999999999998764
No 265
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.66 E-value=1.1e-16 Score=182.53 Aligned_cols=180 Identities=20% Similarity=0.178 Sum_probs=146.4
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~-c~~~~~~ 341 (854)
+++|+.|+|+.|.++.+|+. +..+..|+.|+++.|.+.......+.++..+..+...+ |. ....+. ....+++
T Consensus 111 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~---~~--~l~~i~~~~~~~l~ 185 (440)
T 3zyj_A 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGE---LK--RLSYISEGAFEGLS 185 (440)
T ss_dssp CSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCC---CT--TCCEECTTTTTTCS
T ss_pred CccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCC---CC--CcceeCcchhhccc
Confidence 56789999999999999985 89999999999999988764444455554444442211 11 011121 1245688
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 420 (854)
+|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 186 ~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 263 (440)
T 3zyj_A 186 NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 263 (440)
T ss_dssp SCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECT
T ss_pred ccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECC
Confidence 9999999999999 777 489999999999999999998775 9999999999999999999889999999999999999
Q ss_pred cccccccccccc---ccccccccccCCcccccCC
Q 003046 421 NNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
+|+|+ .+|... +.+++.|++++||..|.+.
T Consensus 264 ~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 264 HNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999 677665 5677899999999999875
No 266
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.65 E-value=3.4e-16 Score=166.62 Aligned_cols=179 Identities=17% Similarity=0.089 Sum_probs=131.5
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPS 342 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~-~~~~~~ 342 (854)
+..++.|.+..|.++.++ .+..+..|+.|+++.|.+.. +..+..+..+..+.. .-| ....+... ...+++
T Consensus 40 l~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~L---~~n---~l~~~~~~~~~~l~~ 110 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHD--ISALKELTNLTYLIL---TGN---QLQSLPNGVFDKLTN 110 (272)
T ss_dssp HTTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCC--CGGGTTCTTCCEEEC---TTS---CCCCCCTTTTTTCTT
T ss_pred ccceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCC--chhhcCCCCCCEEEC---CCC---ccCccChhHhcCCcC
Confidence 445566666666666654 35666666666666666554 123333333333311 111 01122211 346789
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..|..|+.+++|+.|+|++
T Consensus 111 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (272)
T 3rfs_A 111 LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQ 190 (272)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCC
Confidence 99999999999977777799999999999999999998887 78999999999999999987777889999999999999
Q ss_pred ccccccccccc--ccccccccccCCcccccCC
Q 003046 422 NMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~~l~~~~n~~~~~~~ 451 (854)
|+|++..|..+ +.+++.|++.+|+..|.+.
T Consensus 191 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99996555433 6788999999999988765
No 267
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.64 E-value=1e-16 Score=195.87 Aligned_cols=83 Identities=28% Similarity=0.436 Sum_probs=57.2
Q ss_pred CccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccccccccc--cccccccc
Q 003046 364 LSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLN 440 (854)
Q Consensus 364 l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~ 440 (854)
+++|+.|+|++|+|+|.+|. +++|++|+.|+|++|+|+|.+|..|++|++|+.|||++|+|+|.+|..+ +..++.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 35566677777777766654 6667777777777777777777777777777777777777777777666 55667777
Q ss_pred ccCCcc
Q 003046 441 YAGNIN 446 (854)
Q Consensus 441 ~~~n~~ 446 (854)
+++|+.
T Consensus 711 ls~N~l 716 (768)
T 3rgz_A 711 LSNNNL 716 (768)
T ss_dssp CCSSEE
T ss_pred CcCCcc
Confidence 776654
No 268
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.64 E-value=2.8e-16 Score=179.94 Aligned_cols=180 Identities=18% Similarity=0.193 Sum_probs=145.5
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~~ 341 (854)
+++|+.|+|+.|.++.+|+. +..+..|+.|+++.|.+.......+..+..+..+.. .-|. ....+.- ...+++
T Consensus 122 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l---~~~~--~l~~i~~~~~~~l~ 196 (452)
T 3zyi_A 122 LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL---GELK--KLEYISEGAFEGLF 196 (452)
T ss_dssp CTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC---CCCT--TCCEECTTTTTTCT
T ss_pred cccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC---CCCC--CccccChhhccCCC
Confidence 56789999999999999987 888999999999999887644444444444444422 1111 0111221 245678
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 420 (854)
+|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 197 ~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 274 (452)
T 3zyi_A 197 NLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLA 274 (452)
T ss_dssp TCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECC
Confidence 9999999999999 566 589999999999999999998876 9999999999999999999889999999999999999
Q ss_pred cccccccccccc---ccccccccccCCcccccCC
Q 003046 421 NNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
+|+|+ .+|... +.+++.|++++||..|.+.
T Consensus 275 ~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 275 HNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp SSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999 677655 5678899999999999875
No 269
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.63 E-value=1.9e-16 Score=172.29 Aligned_cols=177 Identities=24% Similarity=0.199 Sum_probs=137.4
Q ss_pred cccceeeeecccCCCC-CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCe-eEeCCCCC
Q 003046 263 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSW-LQCNSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s-~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~-~~c~~~~~ 340 (854)
.++.|+.|+|+.|.++ .+|..+..+..|+.|+++.|.+....+..+..+..++.+... -| ...+ +......+
T Consensus 99 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~---~N---~l~~~~p~~l~~l 172 (313)
T 1ogq_A 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD---GN---RISGAIPDSYGSF 172 (313)
T ss_dssp GCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC---SS---CCEEECCGGGGCC
T ss_pred cCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc---CC---cccCcCCHHHhhh
Confidence 4678899999999998 777779999999999999999875445556666555554221 11 1111 11222344
Q ss_pred C-CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 341 P-SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~-~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
+ +|+.|+|++|++++.+|..|..++ |+.|+|++|+|++.+|. |..+++|+.|+|++|+|++.+|. +..+++|+.|+
T Consensus 173 ~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~ 250 (313)
T 1ogq_A 173 SKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLD 250 (313)
T ss_dssp CTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEE
T ss_pred hhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEE
Confidence 4 889999999999988898888887 99999999999887775 78899999999999999866665 88889999999
Q ss_pred cccccccccccccc--ccccccccccCCccc
Q 003046 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
|++|+|+|.+|..+ +.+++.|++++|...
T Consensus 251 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp CCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred CcCCcccCcCChHHhcCcCCCEEECcCCccc
Confidence 99999998888877 677888899888643
No 270
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.63 E-value=1.6e-15 Score=157.22 Aligned_cols=151 Identities=23% Similarity=0.177 Sum_probs=127.9
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
+.++++.+.++.+|+.+. ..|+.|+++.|.+.. ..|- ....+++|+.|+
T Consensus 22 ~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~-------------------~~~~----------~~~~l~~L~~L~ 70 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITK-------------------LEPG----------VFDSLINLKELY 70 (229)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCCEEE
T ss_pred CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCc-------------------cCHH----------HhhCccCCcEEE
Confidence 457778999999998765 889999999998864 1110 123467999999
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..+..|.++++|+.|+|++|+|+++++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+
T Consensus 71 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~- 148 (229)
T 3e6j_A 71 LGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK- 148 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-
T ss_pred CCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-
Confidence 999999855556789999999999999999998887 789999999999999999 89999999999999999999999
Q ss_pred cccccc---ccccccccccCCcccccCC
Q 003046 427 TVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
.+|... +.+++.|++.+|+..|.+.
T Consensus 149 ~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 149 SIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 666554 5678999999999998764
No 271
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.63 E-value=7.5e-16 Score=165.61 Aligned_cols=172 Identities=21% Similarity=0.224 Sum_probs=125.9
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCee
Q 003046 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 344 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~ 344 (854)
++++.+++..+.++.+|+.+. ..++.|+++.|.+.......+..+..+..+... -+ ....+... ..+++|+
T Consensus 10 ~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~---~n---~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLD---RA---ELTKLQVD-GTLPVLG 80 (290)
T ss_dssp TTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECT---TS---CCCEEECC-SCCTTCC
T ss_pred CCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECC---CC---ccCcccCC-CCCCcCC
Confidence 344555555566666655543 345555665555544333334333333333111 01 12222222 4678999
Q ss_pred EEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 345 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 345 ~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999999 8999999999999999999999999876 8999999999999999997777788999999999999999
Q ss_pred ccccccccc---ccccccccccCCccc
Q 003046 424 LSGTVPSSL---LSKNVVLNYAGNINL 447 (854)
Q Consensus 424 l~g~ip~~l---~~~l~~l~~~~n~~~ 447 (854)
|+ .+|... +.+++.|++++|...
T Consensus 160 l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 160 LT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 99 788766 567788999999654
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.62 E-value=1.2e-16 Score=175.07 Aligned_cols=176 Identities=11% Similarity=0.091 Sum_probs=120.6
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
...++.|+|..|.++.+|+.+..+..|+.|+++.|.+.. .+..+.++..+..+...+ |. ...++.....+++|
T Consensus 80 ~~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~-lp~~~~~l~~L~~L~Ls~---n~---l~~lp~~l~~l~~L 152 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLAR---NP---LRALPASIASLNRL 152 (328)
T ss_dssp STTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCC-CCSCGGGGTTCSEEEEES---CC---CCCCCGGGGGCTTC
T ss_pred ccceeEEEccCCCchhcChhhhhCCCCCEEECCCCCccc-hhHHHhccCCCCEEECCC---Cc---cccCcHHHhcCcCC
Confidence 345667777777777777777777777777777776652 223333443333321110 10 11111123356688
Q ss_pred eEEEecCCCCcccCCccccc---------CccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCC
Q 003046 344 TVIHLSSKNLTGNIPSDLTK---------LSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL 414 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~---------l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 414 (854)
+.|+|++|++.+.+|..+.. +++|+.|+|++|+|+.+++.+.++++|+.|+|++|+|+ .+|..++.+++|
T Consensus 153 ~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L 231 (328)
T 4fcg_A 153 RELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKL 231 (328)
T ss_dssp CEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTC
T ss_pred CEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCC
Confidence 88888888888888877665 88888888888888866556888888888888888888 467778888888
Q ss_pred ceeecccccccccccccc--ccccccccccCCccc
Q 003046 415 RELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 415 ~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
+.|+|++|++.+.+|..+ +.+++.|++++|...
T Consensus 232 ~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 266 (328)
T 4fcg_A 232 EELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL 266 (328)
T ss_dssp CEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTC
T ss_pred CEEECcCCcchhhhHHHhcCCCCCCEEECCCCCch
Confidence 888888888888888776 677888888887554
No 273
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.62 E-value=1.9e-16 Score=171.30 Aligned_cols=182 Identities=14% Similarity=0.072 Sum_probs=141.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHH-HHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~-~~l~~l~~~~~~~~~~~dpc~~~~~~~~~-c~~~~~~ 341 (854)
++.|+.|+|+.|.++.+|+.+..+..|+.|+++.|.+..... ..+..+..+..+.. .-|. ..... .....++
T Consensus 77 ~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l---~~n~---l~~~~~~~~~~l~ 150 (306)
T 2z66_A 77 TTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI---SHTH---TRVAFNGIFNGLS 150 (306)
T ss_dssp CSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEEC---TTSC---CEECSTTTTTTCT
T ss_pred ccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEEC---CCCc---CCccchhhcccCc
Confidence 567788888888888888888888888888888887665322 23333333433311 1110 11111 1234578
Q ss_pred CeeEEEecCCCCcc-cCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 342 SITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g-~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
+|+.|+|++|++++ .+|..+..+++|+.|+|++|+|++.+|. +.++++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 151 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 230 (306)
T 2z66_A 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 230 (306)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEEC
T ss_pred CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeEC
Confidence 99999999999997 6899999999999999999999998775 889999999999999999777778999999999999
Q ss_pred ccccccccccccc--c-cccccccccCCcccccCC
Q 003046 420 QNNMLSGTVPSSL--L-SKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 420 ~~N~l~g~ip~~l--~-~~l~~l~~~~n~~~~~~~ 451 (854)
++|+|++..|..+ + .+++.|++++|+..|.+.
T Consensus 231 ~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 231 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp TTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 9999998888776 3 478999999999988754
No 274
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.59 E-value=2.1e-15 Score=151.77 Aligned_cols=154 Identities=18% Similarity=0.161 Sum_probs=118.2
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
+.++++.|.++.+|..+.. .++.|+++.|.+... .+- + ....+++|+.|+
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~-------------------~~~------~---~~~~l~~L~~L~ 60 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRI-------------------SSD------G---LFGRLPHLVKLE 60 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSB-------------------CCS------C---SGGGCTTCCEEE
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCcc-------------------CCc------c---ccccCCCCCEEE
Confidence 4577889999999887654 788888888877540 000 0 013466899999
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..|..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++
T Consensus 61 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 999999988888999999999999999999998886 8889999999999999998888899999999999999999987
Q ss_pred cccccccc-ccccccccCCcccccCC
Q 003046 427 TVPSSLLS-KNVVLNYAGNINLHEGG 451 (854)
Q Consensus 427 ~ip~~l~~-~l~~l~~~~n~~~~~~~ 451 (854)
..+...+. .+....+.++...|..+
T Consensus 141 ~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 141 NCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 77644322 23333455555556544
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.59 E-value=1.2e-15 Score=163.28 Aligned_cols=177 Identities=15% Similarity=0.131 Sum_probs=128.3
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCee-EeCCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~-~c~~~~~~~ 342 (854)
+.++.|+|+.|.++.+|+. +..+..|+.|+++.|.+....+..+..+..+..+.... ..- ...+ .-....+++
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~~----l~~~~~~~~~~l~~ 106 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD-NAQ----LRSVDPATFHGLGR 106 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS-CTT----CCCCCTTTTTTCTT
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC-CCC----ccccCHHHhcCCcC
Confidence 3566777777777777764 77777777777777776654334444444443332111 000 0111 012345678
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|+.|+|++|++++..|..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 107 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 186 (285)
T 1ozn_A 107 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186 (285)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCC
Confidence 99999999999977788889999999999999999988876 78899999999999999966666788999999999999
Q ss_pred ccccccccccc--ccccccccccCCcc
Q 003046 422 NMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~~l~~~~n~~ 446 (854)
|+|++..|..+ +.+++.|++++|..
T Consensus 187 n~l~~~~~~~~~~l~~L~~L~l~~n~l 213 (285)
T 1ozn_A 187 NRVAHVHPHAFRDLGRLMTLYLFANNL 213 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcccccCHhHccCcccccEeeCCCCcC
Confidence 99996667666 56788889888854
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.58 E-value=6.5e-15 Score=168.30 Aligned_cols=186 Identities=14% Similarity=0.079 Sum_probs=132.3
Q ss_pred cceeeeecccCCCCCCCcc---------cchhhhceeccCCCCCccHHHHHHHHhhcC---CCCccCCC-----------
Q 003046 265 PFVLSFKFGKTYDSSRGPL---------LNAMEINKYLERNDGSIDGVAIVSVISLYS---SADWAQEG----------- 321 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~---------i~~le~l~~L~l~~~~~~~~~~~~l~~l~~---~~~~~~~~----------- 321 (854)
..++.|++..|.+..+++. +..+..|+.|+++.|.+....+..+..... +..+...+
T Consensus 180 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 259 (455)
T 3v47_A 180 KHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHT 259 (455)
T ss_dssp CEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCC
T ss_pred ccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchh
Confidence 4555666666666666554 224467999999999998888877766521 11110000
Q ss_pred ----CCC-----CCCCCCCeeE----------e-CCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccC
Q 003046 322 ----GDP-----CLPVPWSWLQ----------C-NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI 381 (854)
Q Consensus 322 ----~dp-----c~~~~~~~~~----------c-~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~ 381 (854)
..+ +.......+. . ....+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 339 (455)
T 3v47_A 260 NFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSID 339 (455)
T ss_dssp SSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred hhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcC
Confidence 000 0000011111 1 1345678999999999999888888999999999999999998887
Q ss_pred CC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccccccccc---ccccccccccCCcccccCC
Q 003046 382 PD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 382 ~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|... +++++.|++++|+..|.++
T Consensus 340 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 340 SRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp GGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 75 788999999999999999888888999999999999999999 566644 5677888999999888765
No 277
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.58 E-value=7.6e-16 Score=164.05 Aligned_cols=179 Identities=14% Similarity=0.111 Sum_probs=119.9
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~-c~~~~~~~ 342 (854)
+.|+.|+|+.|.++.+++. +..+..|+.|+++.|.+.......+..+..+..+... -|. ...+. -....+++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~---~n~---l~~~~~~~~~~l~~ 125 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV---ETN---LASLENFPIGHLKT 125 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT---TSC---CCCSTTCCCTTCTT
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC---CCC---ccccCchhcccCCC
Confidence 3455555555555555552 5555555555555555443322233333222222110 000 00000 01345679
Q ss_pred eeEEEecCCCCcc-cCCcccccCccCcEEeccCCcccccCCC-CCCCCCcc----EEEcCCcccCCCCCccccCCCCCce
Q 003046 343 ITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR----IIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 343 L~~L~Ls~n~l~g-~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~----~L~Ls~N~l~g~~p~~~~~l~~L~~ 416 (854)
|+.|+|++|++++ .+|..|.++++|+.|+|++|+|++.++. +..+++|+ .|+|++|+|++..+. .....+|+.
T Consensus 126 L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~-~~~~~~L~~ 204 (276)
T 2z62_A 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLKE 204 (276)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTT-SSCSCCEEE
T ss_pred CCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCcc-ccCCCcccE
Confidence 9999999999986 3799999999999999999999998764 66666666 899999999954444 445558999
Q ss_pred eecccccccccccccc---ccccccccccCCcccccCC
Q 003046 417 LYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 417 L~l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
|+|++|+|+ .+|..+ +.+++.|++++|+..|.+.
T Consensus 205 L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 205 LALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EECCSSCCS-CCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred EECCCCcee-ecCHhHhcccccccEEEccCCcccccCC
Confidence 999999999 677665 5677899999999999764
No 278
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=5.6e-16 Score=170.79 Aligned_cols=135 Identities=16% Similarity=0.158 Sum_probs=96.5
Q ss_pred HhhccccccCcEEEEEEEECCCcEEEEEEEecCCc-----cchh-----------------chHHHHHHhhhcCCCceee
Q 003046 529 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-----QGKR-----------------EFTNEVTLLSRIHHRNLVQ 586 (854)
Q Consensus 529 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-----~~~~-----------------~~~~E~~~l~~l~HpnIv~ 586 (854)
.+..+||+|+||.||+|...+|+.||||+++.... ...+ ....|...|.++++.++..
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34678999999999999999999999999864211 0000 1134566666665444322
Q ss_pred EeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCC
Q 003046 587 FLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 666 (854)
Q Consensus 587 l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~ 666 (854)
..-+... ..+|||||+++++|.+... ......++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 178 p~p~~~~--~~~LVME~i~G~~L~~l~~----------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQS--RHTIVMSLVDALPMRQVSS----------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEEE--TTEEEEECCSCEEGGGCCC----------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred Ceeeecc--CceEEEEecCCccHhhhcc----------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 1111111 2379999999988865432 113356889999999999998 999999999999999877
Q ss_pred ----------cEEEEEeccccc
Q 003046 667 ----------RAKVSDFGLSKF 678 (854)
Q Consensus 667 ----------~~kL~DFGla~~ 678 (854)
.+.|+||+.+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999998754
No 279
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.58 E-value=9.1e-16 Score=182.16 Aligned_cols=182 Identities=13% Similarity=0.028 Sum_probs=143.8
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHH-HHHHhhcCCCCccCCCCCCCCCCCCCe-eEeCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSW-LQCNSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~-~~l~~l~~~~~~~~~~~dpc~~~~~~~-~~c~~~~~ 340 (854)
.++.|+.|+|+.|.++.+|+.+..+..|+.|+++.|.+..... ..+..+..+..+.. .-|. ... ..-....+
T Consensus 374 ~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l---~~n~---l~~~~~~~~~~l 447 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDI---SYTN---TKIDFDGIFLGL 447 (606)
T ss_dssp CCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEEC---TTSC---CEECCTTTTTTC
T ss_pred cCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEEC---cCCC---CCccchhhhcCC
Confidence 3567788888888888888888888888888888887765332 33444444443311 1110 111 11123467
Q ss_pred CCeeEEEecCCCCcc-cCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 341 PSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g-~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
++|+.|+|++|++++ .+|..|..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 448 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 527 (606)
T 3vq2_A 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLD 527 (606)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEE
Confidence 899999999999997 4799999999999999999999998886 89999999999999999988899999999999999
Q ss_pred cccccccccccccc--cc-ccccccccCCcccccCC
Q 003046 419 VQNNMLSGTVPSSL--LS-KNVVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~~-~l~~l~~~~n~~~~~~~ 451 (854)
|++|+|+ .+|..+ +. .++.|++++|+..|.+.
T Consensus 528 l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 528 CSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999 899886 33 58899999999999875
No 280
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.57 E-value=3.3e-15 Score=165.75 Aligned_cols=155 Identities=19% Similarity=0.168 Sum_probs=127.1
Q ss_pred ceeeeecccCCCCCCCcc-cc-hhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 266 FVLSFKFGKTYDSSRGPL-LN-AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~-i~-~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
.++.|+|+.|.++.+++. +. .+..|+.|+++.|.+... .+- ...++++|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i-------------------~~~----------~~~~l~~L 90 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI-------------------SSE----------AFVPVPNL 90 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc-------------------Chh----------hccCCCCC
Confidence 357799999999999987 54 899999999999987641 000 12356799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCcc-c---cCCCCCceee
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSS-L---MNLPNLRELY 418 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~-~---~~l~~L~~L~ 418 (854)
+.|+|++|+|++..+..|.+|++|+.|+|++|+|++..|. |.++++|+.|+|++|+|++ +|.. | ..+++|+.|+
T Consensus 91 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~ 169 (361)
T 2xot_A 91 RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLD 169 (361)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEE
T ss_pred CEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEE
Confidence 9999999999977777899999999999999999998775 9999999999999999995 5554 4 6799999999
Q ss_pred cccccccccccccccccc-----ccccccCCcccccCC
Q 003046 419 VQNNMLSGTVPSSLLSKN-----VVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~ip~~l~~~l-----~~l~~~~n~~~~~~~ 451 (854)
|++|+|+ .+|...+..+ ..|++.+|+..|.+.
T Consensus 170 L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 170 LSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999999 7776543332 668999999999763
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.56 E-value=1.8e-14 Score=151.25 Aligned_cols=149 Identities=19% Similarity=0.168 Sum_probs=126.2
Q ss_pred eeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEE
Q 003046 267 VLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVI 346 (854)
Q Consensus 267 l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L 346 (854)
.+.+++..+.++.+|+.+. ..++.|+++.|.+... ... ...++++|+.|
T Consensus 16 ~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~------------------~~~-----------~~~~l~~L~~L 64 (251)
T 3m19_A 16 KKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATL------------------SDA-----------TFRGLTKLTWL 64 (251)
T ss_dssp GTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCC------------------CTT-----------TTTTCTTCCEE
T ss_pred CeEEecCCCCccccCCCCC--CCCCEEEccCCCcCcc------------------CHh-----------HhcCcccCCEE
Confidence 4567889999999999876 5789999999987641 000 12356799999
Q ss_pred EecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccc
Q 003046 347 HLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 347 ~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
+|++|+|++..|..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+
T Consensus 65 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 65 NLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC
Confidence 9999999988888899999999999999999998886 789999999999999999777777899999999999999999
Q ss_pred cccccc-c--ccccccccccCCccc
Q 003046 426 GTVPSS-L--LSKNVVLNYAGNINL 447 (854)
Q Consensus 426 g~ip~~-l--~~~l~~l~~~~n~~~ 447 (854)
.+|.. + +.+++.|++++|...
T Consensus 145 -~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 145 -SIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCCS
T ss_pred -ccCHHHcCcCcCCCEEECCCCcCC
Confidence 56654 4 578899999999654
No 282
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.56 E-value=2.4e-15 Score=168.55 Aligned_cols=181 Identities=17% Similarity=0.150 Sum_probs=113.2
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCC---CCCCCCCCeeEe----
Q 003046 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGD---PCLPVPWSWLQC---- 335 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~d---pc~~~~~~~~~c---- 335 (854)
++.|+.|+|+.|.++.++|. +..+..|+.|+++.|.+....+..+.++. .+...... -..+.....+..
T Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~---~L~l~~n~l~~~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 140 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLF---HANVSYNLLSTLAIPIAVEELDASHNS 216 (390)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCS---EEECCSSCCSEEECCSSCSEEECCSSC
T ss_pred CCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccc---eeecccccccccCCCCcceEEECCCCe
Confidence 56778888888888888776 78888888888888877653333222221 10000000 000000000000
Q ss_pred --------------------------CCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCC
Q 003046 336 --------------------------NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPD 389 (854)
Q Consensus 336 --------------------------~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~ 389 (854)
....+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+..+..+++
T Consensus 217 l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~ 296 (390)
T 3o6n_A 217 INVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPT 296 (390)
T ss_dssp CCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTT
T ss_pred eeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCC
Confidence 012345677777777777766677777777777777777777776655666777
Q ss_pred ccEEEcCCcccCCCCCccccCCCCCceeeccccccccccccccccccccccccCCccccc
Q 003046 390 LRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHE 449 (854)
Q Consensus 390 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~~~~ 449 (854)
|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|...+.+++.|++++|+..|.
T Consensus 297 L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 297 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCEEECCCCcce-ecCccccccCcCCEEECCCCccc-eeCchhhccCCEEEcCCCCccch
Confidence 777777777777 56666777777777777777777 56655667777777777776664
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=2.3e-15 Score=178.46 Aligned_cols=182 Identities=17% Similarity=0.155 Sum_probs=115.7
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCC------CCC----------C
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEG------GDP----------C 325 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~------~dp----------c 325 (854)
.++.|+.|+|+.|.++.++|. +..+..|+.|+++.|.+....+..+..+. .+.... ..| |
T Consensus 145 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~---~L~l~~n~l~~l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 145 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLF---HANVSYNLLSTLAIPIAVEELDASHN 221 (597)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCS---EEECCSSCCSEEECCTTCSEEECCSS
T ss_pred cCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhh---hhhcccCccccccCCchhheeeccCC
Confidence 356778888888888888775 78888888888888876653322222221 100000 000 0
Q ss_pred --------CCCCCCeeEe---------CCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCC
Q 003046 326 --------LPVPWSWLQC---------NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCP 388 (854)
Q Consensus 326 --------~~~~~~~~~c---------~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~ 388 (854)
.+.....+.. ....+++|+.|+|++|+|++.+|..|+++++|+.|+|++|+|+++++.+..++
T Consensus 222 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~ 301 (597)
T 3oja_B 222 SINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP 301 (597)
T ss_dssp CCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCT
T ss_pred cccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCC
Confidence 0000000000 01235677777777777777777777777777777777777777666666677
Q ss_pred CccEEEcCCcccCCCCCccccCCCCCceeeccccccccccccccccccccccccCCccccc
Q 003046 389 DLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHE 449 (854)
Q Consensus 389 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~~~~ 449 (854)
+|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|+ .+|...+..+..|++++|+..|.
T Consensus 302 ~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 302 TLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp TCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 7777777777777 57777777777777777777777 56666677777777777777664
No 284
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.56 E-value=1.2e-14 Score=149.68 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=119.6
Q ss_pred ceeeeecccCCCCCCCcc--cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 266 FVLSFKFGKTYDSSRGPL--LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~--i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
.++.|+|+.|.++.++|. +..+..|+.|+++.|.+... .+- ...++++|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i-------------------~~~----------~~~~l~~L 83 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI-------------------EEG----------AFEGASGV 83 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE-------------------CHH----------HhCCCCCC
Confidence 346899999999999764 89999999999999988641 000 12356799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..|..|.++++|++|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 84 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 84 NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp CEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 9999999999987777899999999999999999999776 899999999999999999888999999999999999999
Q ss_pred cccccccccc
Q 003046 423 MLSGTVPSSL 432 (854)
Q Consensus 423 ~l~g~ip~~l 432 (854)
++.+..+...
T Consensus 164 ~l~c~c~l~~ 173 (220)
T 2v70_A 164 PFNCNCYLAW 173 (220)
T ss_dssp CEECSGGGHH
T ss_pred CCcCCCchHH
Confidence 9997666433
No 285
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.55 E-value=2.7e-14 Score=145.27 Aligned_cols=109 Identities=25% Similarity=0.245 Sum_probs=61.8
Q ss_pred CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 34566666666666643344455666666666666666655554 45566666666666666644444455666666666
Q ss_pred cccccccccccccc---ccccccccccCCccccc
Q 003046 419 VQNNMLSGTVPSSL---LSKNVVLNYAGNINLHE 449 (854)
Q Consensus 419 l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~ 449 (854)
|++|+|+ .+|... +.+++.|++++|+..|.
T Consensus 131 l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 131 LYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCCccc-eeCHHHhccCCCccEEEecCCCeecC
Confidence 6666666 344332 34555566666655544
No 286
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.53 E-value=2.1e-14 Score=146.12 Aligned_cols=146 Identities=19% Similarity=0.133 Sum_probs=120.0
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
+.++.|+|..|.++.+|+. +..+..|+.|+++.|.+.. ..+. ....+++|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L 78 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-------------------LPNG----------VFNKLTSL 78 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc-------------------cChh----------hcCCCCCc
Confidence 4678999999999999987 7899999999999998763 0000 01346789
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..+..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 79 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158 (208)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred CEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCC
Confidence 9999999999966666789999999999999999998887 788999999999999999766667899999999999999
Q ss_pred ccccccccccccccccccccCC
Q 003046 423 MLSGTVPSSLLSKNVVLNYAGN 444 (854)
Q Consensus 423 ~l~g~ip~~l~~~l~~l~~~~n 444 (854)
++.+..| .++.|++.+|
T Consensus 159 ~~~~~~~-----~l~~L~~~~n 175 (208)
T 2o6s_A 159 PWDCTCP-----GIRYLSEWIN 175 (208)
T ss_dssp CBCCCTT-----TTHHHHHHHH
T ss_pred CeecCCC-----CHHHHHHHHH
Confidence 9986654 3445554444
No 287
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.53 E-value=1.1e-14 Score=154.87 Aligned_cols=168 Identities=20% Similarity=0.145 Sum_probs=114.2
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~~~L 343 (854)
+.|+.|+|+.|.++.+ +.+..+..|+.|+++.|.+.......+..+..+..+.. .-| ....+.. ....+++|
T Consensus 63 ~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L---~~n---~l~~~~~~~~~~l~~L 135 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL---VEN---QLQSLPDGVFDKLTNL 135 (272)
T ss_dssp TTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC---TTS---CCCCCCTTTTTTCTTC
T ss_pred CCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC---CCC---cCCccCHHHhccCCCC
Confidence 3445555555555554 24455555555555555544322222222222222211 001 0111111 12456799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..|..+..+++|+.|+|++|
T Consensus 136 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 215 (272)
T 3rfs_A 136 TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCC
Confidence 9999999999977777789999999999999999998887 788999999999999999888888999999999999999
Q ss_pred ccccccccccccccccccccCC
Q 003046 423 MLSGTVPSSLLSKNVVLNYAGN 444 (854)
Q Consensus 423 ~l~g~ip~~l~~~l~~l~~~~n 444 (854)
++.+..| .+..|++.+|
T Consensus 216 ~~~~~~~-----~l~~l~~~~n 232 (272)
T 3rfs_A 216 PWDCTCP-----GIRYLSEWIN 232 (272)
T ss_dssp CBCCCTT-----TTHHHHHHHH
T ss_pred CccccCc-----HHHHHHHHHH
Confidence 9997765 3555555544
No 288
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.53 E-value=4.1e-15 Score=171.27 Aligned_cols=182 Identities=20% Similarity=0.069 Sum_probs=134.0
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
++.|+.|+|..|.++.+|+. +..+..|+.|++..|.+.......+..+..+..+... -|. ....+.-......+
T Consensus 151 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~---~~~--~~~~~~~~~~~~~~ 225 (477)
T 2id5_A 151 LNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS---HWP--YLDTMTPNCLYGLN 225 (477)
T ss_dssp CTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEE---CCT--TCCEECTTTTTTCC
T ss_pred CCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCC---CCc--cccccCcccccCcc
Confidence 45677777777777777765 7777777777777776654322223333222222110 010 00111111122348
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 226 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (477)
T 2id5_A 226 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 305 (477)
T ss_dssp CSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCS
T ss_pred ccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCC
Confidence 99999999999944336899999999999999999998886 89999999999999999998899999999999999999
Q ss_pred ccccccccccc---ccccccccccCCcccccCC
Q 003046 422 NMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 422 N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
|+|+ .+|... +.+++.|++++|+..|.+.
T Consensus 306 N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 306 NQLT-TLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCCS-CCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CcCc-eeCHhHcCCCcccCEEEccCCCccCccc
Confidence 9999 666655 5678999999999998764
No 289
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.53 E-value=2e-14 Score=144.52 Aligned_cols=111 Identities=26% Similarity=0.334 Sum_probs=100.3
Q ss_pred CCeeEEEecCCCCcccCCc-ccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 341 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
++|+.|+|++|+|++..+. .|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 3899999999999965554 499999999999999999999775 99999999999999999988888899999999999
Q ss_pred cccccccccccccc--ccccccccccCCcccccCC
Q 003046 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~~~~ 451 (854)
|++|+|++.+|..+ +.+++.|++++|+..|.+.
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999997777776 6788999999999988754
No 290
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.53 E-value=2.1e-14 Score=171.39 Aligned_cols=182 Identities=17% Similarity=0.131 Sum_probs=127.8
Q ss_pred ceeeeecccCCCCCCCcc-cc-------hhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe--
Q 003046 266 FVLSFKFGKTYDSSRGPL-LN-------AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-- 335 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~-i~-------~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-- 335 (854)
.|+.|+|+.|.++...|. |. .+..|+.|+++.|.+.......+..+..+..+...+ +.-...+-.....
T Consensus 403 ~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~-N~l~~i~~~~~~~~~ 481 (636)
T 4eco_A 403 VMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG-NMLTEIPKNSLKDEN 481 (636)
T ss_dssp CEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS-SCCSBCCSSSSEETT
T ss_pred ccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC-CCCCCcCHHHhcccc
Confidence 455555555555553332 44 444566666666665543333333343333321110 0000000000110
Q ss_pred -CCCCCCCeeEEEecCCCCcccCCcccc--cCccCcEEeccCCcccccCCCCCCCCCccEEEc------CCcccCCCCCc
Q 003046 336 -NSDPQPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHL------EDNQLTGPLPS 406 (854)
Q Consensus 336 -~~~~~~~L~~L~Ls~n~l~g~lp~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L------s~N~l~g~~p~ 406 (854)
...++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++++..+.++++|+.|+| ++|++.+.+|.
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~ 560 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPE 560 (636)
T ss_dssp EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCT
T ss_pred ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChH
Confidence 0123348999999999999 8999998 999999999999999996666999999999999 56888999999
Q ss_pred cccCCCCCceeeccccccccccccccccccccccccCCcccccC
Q 003046 407 SLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 407 ~~~~l~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~~~~~ 450 (854)
.|+++++|+.|+|++|+|+ .+|..+.+.++.|++++|+..|..
T Consensus 561 ~l~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 561 GITLCPSLTQLQIGSNDIR-KVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp TGGGCSSCCEEECCSSCCC-BCCSCCCTTCCEEECCSCTTCEEE
T ss_pred HHhcCCCCCEEECCCCcCC-ccCHhHhCcCCEEECcCCCCcccc
Confidence 9999999999999999995 999999999999999999988744
No 291
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.53 E-value=1.1e-14 Score=166.65 Aligned_cols=178 Identities=19% Similarity=0.156 Sum_probs=135.7
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~ 340 (854)
.++.|+.|+|+.|.++.++|. +..+..|+.|+++.|.+.......+..+..+..+... -| ....+.. ....+
T Consensus 97 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~---~N---~l~~~~~~~~~~l 170 (452)
T 3zyi_A 97 HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR---NN---PIESIPSYAFNRV 170 (452)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC---SC---CCCEECTTTTTTC
T ss_pred CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC---CC---CcceeCHhHHhcC
Confidence 467889999999999999876 8999999999999998876444444444444444221 11 1222221 34567
Q ss_pred CCeeEEEecCCCCcccCCc-ccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++|+.|+|++|+..+.+|. .|.++++|+.|+|++|+|++. |.+..+++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 249 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 249 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEEC
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEe
Confidence 8899999998444335554 688899999999999999875 67889999999999999999888999999999999999
Q ss_pred ccccccccccccc--ccccccccccCCccc
Q 003046 420 QNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 420 ~~N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
++|+|++..|..+ +.+|+.|++++|...
T Consensus 250 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 250 MNSQVSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCceECHHHhcCCCCCCEEECCCCcCC
Confidence 9999995555555 577889999988543
No 292
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.53 E-value=1.3e-14 Score=146.59 Aligned_cols=149 Identities=16% Similarity=0.140 Sum_probs=125.1
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
.++.++.|+|+.|.++.+| .+..+..|+.|+++.|.+.. . . ....+++
T Consensus 42 ~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~--------------~-----~------------~l~~l~~ 89 (197)
T 4ezg_A 42 QMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATN--------------Y-----N------------PISGLSN 89 (197)
T ss_dssp HHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSC--------------C-----G------------GGTTCTT
T ss_pred hcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCc--------------c-----h------------hhhcCCC
Confidence 4567899999999999998 68999999999999886542 0 0 0124678
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcc-cCCCCCccccCCCCCceeecc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ-LTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~l~ 420 (854)
|+.|+|++|++++..|..|++|++|+.|+|++|++++..+. +..+++|+.|+|++|+ ++ .+| .+..+++|+.|+|+
T Consensus 90 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 90 LERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQ 167 (197)
T ss_dssp CCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECT
T ss_pred CCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECC
Confidence 99999999999988899999999999999999999986554 8999999999999998 66 676 69999999999999
Q ss_pred ccccccccc-cccccccccccccCCcc
Q 003046 421 NNMLSGTVP-SSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 421 ~N~l~g~ip-~~l~~~l~~l~~~~n~~ 446 (854)
+|+|+ .++ -.-+++++.|++.+|+.
T Consensus 168 ~n~i~-~~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 168 FDGVH-DYRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp TBCCC-CCTTGGGCSSCCEEEECBC--
T ss_pred CCCCc-ChHHhccCCCCCEEEeeCccc
Confidence 99999 454 33378899999999863
No 293
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.53 E-value=2.2e-14 Score=144.46 Aligned_cols=109 Identities=25% Similarity=0.292 Sum_probs=100.6
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|+++++. |.+|++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 47999999999999 8999999999999999999999998886 999999999999999999888889999999999999
Q ss_pred ccccccccccccc---ccccccccccCCcccccCC
Q 003046 420 QNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 420 ~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
++|+|+ .+|... +.+++.|++.+|+..|.+.
T Consensus 110 ~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 110 HGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCC-eeChhhhhcCccccEEEeCCCCeecCCc
Confidence 999999 777764 5678999999999999764
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.52 E-value=1.5e-14 Score=158.28 Aligned_cols=174 Identities=17% Similarity=0.202 Sum_probs=107.7
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccH--HHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG--VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~--~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
+.|+.|+|..|.++.+++. +..+..|+.|+++.|.+.. .....+.++..+..+.. .-|. ...++ ..-.+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l---~~n~---l~~l~--~~~~~ 192 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRI---ADTN---ITTIP--QGLPP 192 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEEC---CSSC---CCSCC--SSCCT
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEEC---CCCc---cccCC--ccccc
Confidence 3455666666666666554 5666666666666665532 11222333333332211 0010 01111 01125
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 420 (854)
+|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++. +..+++|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 193 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECC
Confidence 788888888888877777788888888888888888877764 777888888888888888 777778888888888888
Q ss_pred ccccccccccccc---------cccccccccCCcccc
Q 003046 421 NNMLSGTVPSSLL---------SKNVVLNYAGNINLH 448 (854)
Q Consensus 421 ~N~l~g~ip~~l~---------~~l~~l~~~~n~~~~ 448 (854)
+|+|+ .+|...+ ..+..|++.+||..+
T Consensus 272 ~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 272 NNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp SSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 88888 5554443 334567777777643
No 295
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.52 E-value=1.6e-14 Score=153.36 Aligned_cols=171 Identities=19% Similarity=0.161 Sum_probs=123.0
Q ss_pred eeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCCeeE
Q 003046 267 VLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPSITV 345 (854)
Q Consensus 267 l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~-~~~~~~L~~ 345 (854)
+..++++.+.++.+|+.+. ..++.|+++.|.+......++.++..++.+... -| ....+.-. ...+++|+.
T Consensus 18 ~~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~---~n---~l~~i~~~~~~~l~~L~~ 89 (270)
T 2o6q_A 18 KNSVDCSSKKLTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLN---DN---KLQTLPAGIFKELKNLET 89 (270)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECC---SS---CCSCCCTTTTSSCTTCCE
T ss_pred CCEEEccCCCCCccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECC---CC---ccCeeChhhhcCCCCCCE
Confidence 4568889999999998765 578999999998876443344444444443221 11 01111111 245678888
Q ss_pred EEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccc
Q 003046 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 346 L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 424 (854)
|+|++|+|++..+..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 90 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 90 LWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 88888888865566778888888888888888888776 77888888888888888866556688888888888888888
Q ss_pred cccccccc---ccccccccccCCcc
Q 003046 425 SGTVPSSL---LSKNVVLNYAGNIN 446 (854)
Q Consensus 425 ~g~ip~~l---~~~l~~l~~~~n~~ 446 (854)
+ .+|... +.+++.|++++|..
T Consensus 170 ~-~~~~~~~~~l~~L~~L~L~~N~l 193 (270)
T 2o6q_A 170 K-RVPEGAFDKLTELKTLKLDNNQL 193 (270)
T ss_dssp S-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred c-EeChhHhccCCCcCEEECCCCcC
Confidence 8 555543 46678888888754
No 296
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.52 E-value=4.8e-14 Score=145.95 Aligned_cols=136 Identities=18% Similarity=0.133 Sum_probs=117.7
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
+.|+.|+|+.|.++.++|. +..+..|+.|++++|.+.. .++. ....+++|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------i~~~----------~~~~l~~L 90 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-------------------LPVG----------VFDSLTQL 90 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC-------------------cChh----------hcccCCCc
Confidence 5788999999999999765 8999999999999998753 1111 12356799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++..+..|..+++|+.|+|++|+|+.++..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNP 170 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCC
Confidence 99999999999766677899999999999999999887789999999999999999997666789999999999999999
Q ss_pred cccccc
Q 003046 424 LSGTVP 429 (854)
Q Consensus 424 l~g~ip 429 (854)
+.+..+
T Consensus 171 ~~c~c~ 176 (229)
T 3e6j_A 171 WDCECR 176 (229)
T ss_dssp BCTTBG
T ss_pred ccCCcc
Confidence 996654
No 297
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.52 E-value=7.9e-15 Score=158.56 Aligned_cols=175 Identities=17% Similarity=0.097 Sum_probs=103.5
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHH--HHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVA--IVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~--~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
+.++.|+|..|.++.+|+. +..+..|+.|+++.|.+.... ...+..+..++.+.. .-| ....+......++
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L---s~n---~i~~l~~~~~~l~ 101 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL---SFN---GVITMSSNFLGLE 101 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC---CSC---SEEEEEEEEETCT
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC---CCC---ccccChhhcCCCC
Confidence 4678888889999988886 688888999999888876321 233334444444321 111 0112222233455
Q ss_pred CeeEEEecCCCCcccCC-cccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCC-CCCccccCCCCCceee
Q 003046 342 SITVIHLSSKNLTGNIP-SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELY 418 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp-~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~ 418 (854)
+|+.|+|++|++++..+ ..+.++++|+.|+|++|++++.++. +.++++|+.|+|++|++++ .+|..+..+++|+.|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 66666666666663333 3566666666666666666665554 5566666666666666654 3566666666666666
Q ss_pred cccccccccccccc--ccccccccccCCc
Q 003046 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~~~l~~l~~~~n~ 445 (854)
|++|+|++..|..+ +.+++.|++++|.
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 66666664334443 4455666666654
No 298
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.52 E-value=2e-14 Score=141.09 Aligned_cols=136 Identities=20% Similarity=0.166 Sum_probs=118.4
Q ss_pred ccceeeeecccCCCC--CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 264 LPFVLSFKFGKTYDS--SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~n~~s--~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
.+.++.|+|..|.++ .+|+.+..+..|+.|+++.|.+... .....++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-------------------------------~~~~~l~ 71 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-------------------------------SNLPKLP 71 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-------------------------------SSCCCCS
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-------------------------------hhhccCC
Confidence 467899999999999 9999999999999999999987640 0123467
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccC--CCCCCCCCccEEEcCCcccCCCCC---ccccCCCCCce
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP---SSLMNLPNLRE 416 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~ 416 (854)
+|+.|+|++|+|++.+|..+.++++|+.|+|++|+|++.+ +.+..+++|+.|+|++|+|++..+ ..+..+++|+.
T Consensus 72 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 151 (168)
T 2ell_A 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTY 151 (168)
T ss_dssp SCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCE
T ss_pred CCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcE
Confidence 9999999999999879988888999999999999999975 569999999999999999995544 48999999999
Q ss_pred eeccccccccccccc
Q 003046 417 LYVQNNMLSGTVPSS 431 (854)
Q Consensus 417 L~l~~N~l~g~ip~~ 431 (854)
|++++|.+. .+|..
T Consensus 152 L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 152 LDGYDREDQ-EAPDS 165 (168)
T ss_dssp ETTEETTSC-BCCSS
T ss_pred ecCCCCChh-hcccc
Confidence 999999999 77764
No 299
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.52 E-value=3.4e-14 Score=146.14 Aligned_cols=134 Identities=16% Similarity=0.183 Sum_probs=115.7
Q ss_pred cceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
+.++.|+|..|.++.+|+ .+..+..|+.|+++.|++... .|- ...++++|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~-------------------~~~----------~~~~l~~L 82 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL-------------------APD----------AFQGLRSL 82 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCSSC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc-------------------CHH----------HhhCCcCC
Confidence 467899999999999998 499999999999999988641 000 12356799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..+..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 83 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 9999999999955455678999999999999999999876 899999999999999999877788999999999999999
Q ss_pred ccccc
Q 003046 423 MLSGT 427 (854)
Q Consensus 423 ~l~g~ 427 (854)
++...
T Consensus 163 ~~~c~ 167 (220)
T 2v9t_B 163 PFICD 167 (220)
T ss_dssp CEECS
T ss_pred CcCCC
Confidence 99843
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.52 E-value=9.1e-15 Score=161.58 Aligned_cols=181 Identities=13% Similarity=0.086 Sum_probs=127.3
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHH-HHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQ 340 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~-~~l~~l~~~~~~~~~~~dpc~~~~~~~~~-c~~~~~ 340 (854)
++.|+.|+|+.|.++.+|+. +..+..|+.|+++.|.+..... ..+..+..++.+...+ |. ....+. ....++
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~---n~--~~~~~~~~~~~~l 173 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGN---MD--TFTKIQRKDFAGL 173 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEE---SS--SCCEECTTTTTTC
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCC---Cc--cccccCHHHccCC
Confidence 45677777777777777776 7777777777777776654211 1222222222221100 00 011111 123457
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCC----------------
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP---------------- 403 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~---------------- 403 (854)
++|+.|+|++|++++..|..|.++++|++|+|++|+++..++. +..+++|+.|+|++|+|++.
T Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~ 253 (353)
T 2z80_A 174 TFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKK 253 (353)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCE
T ss_pred CCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhc
Confidence 7888899999988888888888888888888888888766655 44588999999999998864
Q ss_pred ---------------CCccccCCCCCceeecccccccccccccc---ccccccccccCCcccccC
Q 003046 404 ---------------LPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 404 ---------------~p~~~~~l~~L~~L~l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~ 450 (854)
+|..+..+++|+.|+|++|+|+ .+|..+ +++++.|++++|+..|.+
T Consensus 254 l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 254 FTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp EEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 3445778899999999999999 899876 567789999999998865
No 301
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.51 E-value=1.8e-14 Score=157.60 Aligned_cols=177 Identities=24% Similarity=0.213 Sum_probs=141.6
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
.++.|+.|+|+.|.++.+|+.+. ..|+.|+++.|.+.......+..+..+..+... ..... ...........+++
T Consensus 98 ~l~~L~~L~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~-~n~l~--~~~~~~~~~~~l~~ 172 (330)
T 1xku_A 98 PLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELG-TNPLK--SSGIENGAFQGMKK 172 (330)
T ss_dssp TCTTCCEEECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC-SSCCC--GGGBCTTGGGGCTT
T ss_pred CCCCCCEEECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECC-CCcCC--ccCcChhhccCCCC
Confidence 35688999999999999998865 789999999999887666667777666555321 11110 00001112345789
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|+.|+|++|+++ .+|..+. ++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..+..+++|+.|+|++
T Consensus 173 L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 249 (330)
T 1xku_A 173 LSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 249 (330)
T ss_dssp CCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCS
T ss_pred cCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCC
Confidence 999999999999 6887765 8999999999999998775 89999999999999999987788999999999999999
Q ss_pred ccccccccccc--ccccccccccCCcccc
Q 003046 422 NMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~~l~~~~n~~~~ 448 (854)
|+|+ .+|..+ +.+++.|++++|....
T Consensus 250 N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 250 NKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp SCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred CcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 9999 999887 6788999999997543
No 302
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.51 E-value=2.1e-14 Score=163.74 Aligned_cols=178 Identities=18% Similarity=0.163 Sum_probs=135.3
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~ 340 (854)
.++.|+.|+|+.|.++.+++. +..+..|+.|+++.|.+.......+..+..+..+... + + ....+.. ....+
T Consensus 86 ~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~-~--N---~i~~~~~~~~~~l 159 (440)
T 3zyj_A 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR-N--N---PIESIPSYAFNRI 159 (440)
T ss_dssp SCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC-S--C---CCCEECTTTTTTC
T ss_pred CCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC-C--C---cccccCHHHhhhC
Confidence 356789999999999999976 8999999999999998876444344444444444221 1 1 1222221 34567
Q ss_pred CCeeEEEecCCCCcccCCc-ccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++|+.|+|++|+..+.+|. .|.++++|+.|+|++|+|+.+ |.+..+++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 238 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCCccCccChhhhccCccCCEEEC
Confidence 8999999998544445554 788999999999999999854 57889999999999999999888999999999999999
Q ss_pred ccccccccccccc--ccccccccccCCccc
Q 003046 420 QNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 420 ~~N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
++|+|++..|..+ +.+|+.|++++|...
T Consensus 239 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 239 IQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp TTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred CCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 9999995545444 577889999998544
No 303
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.51 E-value=1.6e-14 Score=156.70 Aligned_cols=170 Identities=18% Similarity=0.266 Sum_probs=127.0
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.+++ +..+..|+.|+++.|.+... ..+..+..+..+.. .-|. ...+. ....+++|
T Consensus 62 l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l---~~n~---l~~~~-~l~~l~~L 131 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDL---TSTQ---ITDVT-PLAGLSNL 131 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEEC---TTSC---CCCCG-GGTTCTTC
T ss_pred cCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEEC---CCCC---CCCch-hhcCCCCC
Confidence 5678899999999999998 89999999999999887652 24444444444422 1121 11121 13467789
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++ +|. +..+++|+.|+|++|+|++.++ +..+++|+.|+|++|+|++ +|. +..+++|+.|+|++|+
T Consensus 132 ~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 132 QVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSC
T ss_pred CEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEEccCCc
Confidence 999999999984 444 8889999999999999988666 8889999999999999985 443 8888999999999999
Q ss_pred cccccccccccccccccccCCcccc
Q 003046 424 LSGTVPSSLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 424 l~g~ip~~l~~~l~~l~~~~n~~~~ 448 (854)
|++..|-.-+++++.|++++|+..+
T Consensus 207 l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred cCccccccCCCCCCEEEccCCeeec
Confidence 9854443337778888888887644
No 304
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.50 E-value=5.3e-14 Score=149.73 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=121.2
Q ss_pred cceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
..++.|+|+.|.++.+++ .+..+..|+.|+++.|.+...... ....+++|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----------------------------~~~~l~~L 78 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG-----------------------------AYQSLSHL 78 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTT-----------------------------TTTTCTTC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHH-----------------------------HccCCcCC
Confidence 357899999999999998 599999999999999987641000 11345689
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCC-CCCCCCCccEEEcCCcccCCC-CCccccCCCCCceeeccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGP-LPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~l~~ 421 (854)
+.|+|++|+|++..|..|.++++|++|+|++|++++.++ .+.++++|+.|+|++|+|++. +|..|.++++|+.|+|++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~ 158 (276)
T 2z62_A 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCS
T ss_pred CEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCC
Confidence 999999999997777889999999999999999998877 488899999999999999863 688899999999999999
Q ss_pred ccccccccccc--ccccc----cccccCCcc
Q 003046 422 NMLSGTVPSSL--LSKNV----VLNYAGNIN 446 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~----~l~~~~n~~ 446 (854)
|+|++..+..+ +.++. .|++++|..
T Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l 189 (276)
T 2z62_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (276)
T ss_dssp SCCCEECGGGGHHHHTCTTCCEEEECCSSCC
T ss_pred CCCCcCCHHHhhhhhhccccceeeecCCCcc
Confidence 99984333333 33343 567777754
No 305
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.50 E-value=7.4e-15 Score=152.91 Aligned_cols=151 Identities=17% Similarity=0.095 Sum_probs=103.2
Q ss_pred ccceeeeeccc-CCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 264 LPFVLSFKFGK-TYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~-n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
++.|+.|+|+. |.++.+|+. +..+..|+.|+++.|.+.. ..+ ...++
T Consensus 79 l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-----------lp~--------------------~~~l~ 127 (239)
T 2xwt_C 79 LSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-----------FPD--------------------LTKVY 127 (239)
T ss_dssp CTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-----------CCC--------------------CTTCC
T ss_pred CcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-----------ccc--------------------ccccc
Confidence 34556666665 666666653 5566666666666655432 000 11233
Q ss_pred Cee---EEEecCC-CCcccCCcccccCccCc-EEeccCCcccccCCCCCCCCCccEEEcCCcc-cCCCCCccccCC-CCC
Q 003046 342 SIT---VIHLSSK-NLTGNIPSDLTKLSSLV-ELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL-PNL 414 (854)
Q Consensus 342 ~L~---~L~Ls~n-~l~g~lp~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l-~~L 414 (854)
+|+ .|+|++| +|++..+..|.++++|+ .|+|++|+|+.+++.....++|+.|+|++|+ |++..+..|..+ ++|
T Consensus 128 ~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 128 STDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp BCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCC
T ss_pred ccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCC
Confidence 444 8888888 88865556688888888 8888888888666653334788888888884 885556678888 888
Q ss_pred ceeeccccccccccccccccccccccccCCcc
Q 003046 415 RELYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 415 ~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~ 446 (854)
+.|+|++|+|+ .+|...+.+++.|.+.++..
T Consensus 208 ~~L~l~~N~l~-~l~~~~~~~L~~L~l~~~~~ 238 (239)
T 2xwt_C 208 SLLDVSQTSVT-ALPSKGLEHLKELIARNTWT 238 (239)
T ss_dssp SEEECTTCCCC-CCCCTTCTTCSEEECTTC--
T ss_pred cEEECCCCccc-cCChhHhccCceeeccCccC
Confidence 88888888888 77777788888888776643
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.50 E-value=5.3e-15 Score=160.68 Aligned_cols=174 Identities=18% Similarity=0.126 Sum_probs=94.6
Q ss_pred ccceeeeecccCCCC-CCCccc--chhhhceeccCCCCCccHHHHHHHHhh-----cCCCCccCCCCCCCCCCCCCeeEe
Q 003046 264 LPFVLSFKFGKTYDS-SRGPLL--NAMEINKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWLQC 335 (854)
Q Consensus 264 l~~l~~l~L~~n~~s-~lpP~i--~~le~l~~L~l~~~~~~~~~~~~l~~l-----~~~~~~~~~~~dpc~~~~~~~~~c 335 (854)
++.|+.|+|+.|.++ .+|..+ ..+..|+.|+++.|.+... +..+..+ ..++.+... -| ....+.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~---~N---~l~~~~~ 166 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIA---QA---HSLNFSC 166 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEE---SC---SCCCCCT
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEee---CC---CCccchH
Confidence 455666666666665 344444 6666666666666665543 3333333 222222110 00 0111111
Q ss_pred -CCCCCCCeeEEEecCCCCccc--CCccc--ccCccCcEEeccCCcccccC---CC-CCCCCCccEEEcCCcccCCCCC-
Q 003046 336 -NSDPQPSITVIHLSSKNLTGN--IPSDL--TKLSSLVELWLDGNSLTGPI---PD-FSGCPDLRIIHLEDNQLTGPLP- 405 (854)
Q Consensus 336 -~~~~~~~L~~L~Ls~n~l~g~--lp~~~--~~l~~L~~L~Ls~N~l~~~~---~~-~~~l~~L~~L~Ls~N~l~g~~p- 405 (854)
....+++|+.|+|++|++.|. +|..+ .++++|++|+|++|+|++.+ .. +.++++|+.|+|++|+|++..|
T Consensus 167 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 246 (312)
T 1wwl_A 167 EQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA 246 (312)
T ss_dssp TTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC
T ss_pred HHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch
Confidence 123455666677776666654 23334 66666666666666666322 12 3456666667777776665554
Q ss_pred ccccCCCCCceeeccccccccccccccccccccccccCCc
Q 003046 406 SSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 406 ~~~~~l~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~ 445 (854)
..+..+++|+.|+|++|+|+ .+|..+..+++.|++++|.
T Consensus 247 ~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~ 285 (312)
T 1wwl_A 247 PSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNR 285 (312)
T ss_dssp SCCCCCTTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSC
T ss_pred hhhhhcCCCCEEECCCCccC-hhhhhccCCceEEECCCCC
Confidence 34555666667777777666 6666666666666666664
No 307
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.50 E-value=1.2e-14 Score=172.63 Aligned_cols=113 Identities=23% Similarity=0.245 Sum_probs=93.0
Q ss_pred CCCCCeeEEEecCCCCccc---CCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCC
Q 003046 338 DPQPSITVIHLSSKNLTGN---IPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPN 413 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~---lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 413 (854)
..+++|+.|+|++|++++. .+..+..+++|+.|+|++|++++.+|. |.++++|+.|+|++|+|++..|..+.++++
T Consensus 446 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 525 (606)
T 3t6q_A 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG 525 (606)
T ss_dssp TTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCS
T ss_pred hCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccc
Confidence 4567888888888888762 335688888899999999988888765 888999999999999999888888999999
Q ss_pred Cceeecccccccccccccc--ccccccccccCCcccccCC
Q 003046 414 LRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 414 L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~~~~ 451 (854)
| .|+|++|+|++..|..+ +.+++.|++++||..|.+.
T Consensus 526 L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 526 I-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp C-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred c-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9 99999999996555544 6778899999999988764
No 308
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.49 E-value=3.1e-14 Score=167.45 Aligned_cols=183 Identities=17% Similarity=0.111 Sum_probs=133.2
Q ss_pred cccceeeeecccCCCCCC---CcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCee--EeCC
Q 003046 263 SLPFVLSFKFGKTYDSSR---GPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWL--QCNS 337 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~l---pP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~--~c~~ 337 (854)
.++.|+.|+|+.|.++.+ |..+.++..|+.|+++.|.+...... +..+..+..+.. .-|. .... ....
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l---~~n~---l~~~~~~~~~ 417 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDF---QHSN---LKQMSEFSVF 417 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEEC---TTSE---EESCTTSCTT
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEc---cCCc---cccccchhhh
Confidence 455667777777777666 34466667777777776665432111 222222222211 0010 0000 0123
Q ss_pred CCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCccc-ccCC-CCCCCCCccEEEcCCcccCCCCCccccCCCCCc
Q 003046 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR 415 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~-~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 415 (854)
..+++|+.|+|++|++++.+|..|.++++|+.|+|++|+++ +.+| .+..+++|+.|+|++|++++..|..|..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 45789999999999999999999999999999999999998 4455 599999999999999999988899999999999
Q ss_pred eeecccccccccccccc--ccccccccccCCcccccCCC
Q 003046 416 ELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGGR 452 (854)
Q Consensus 416 ~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~~~~~ 452 (854)
.|+|++|+|++..|..+ +.+++.|++++|+..|.+..
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999995555444 67789999999999987653
No 309
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=6e-14 Score=171.58 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=97.8
Q ss_pred CCCeeEEEecCCCCcccCCcccc--cCccCcEEeccCCcccccCCCCCCCCCccEEEcCC------cccCCCCCccccCC
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLED------NQLTGPLPSSLMNL 411 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~------N~l~g~~p~~~~~l 411 (854)
+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++++..+.+|++|+.|+|++ |++.+.+|..|.+|
T Consensus 727 l~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L 805 (876)
T 4ecn_A 727 TYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTC 805 (876)
T ss_dssp GGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGC
T ss_pred cCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcC
Confidence 448999999999999 8999998 99999999999999999766799999999999976 88899999999999
Q ss_pred CCCceeeccccccccccccccccccccccccCCcccc
Q 003046 412 PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 412 ~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~~~ 448 (854)
++|+.|+|++|+| +.+|..+.++|+.|++++|+...
T Consensus 806 ~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 806 PSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp SSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 9999999999999 59999999999999999998653
No 310
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.49 E-value=7.3e-14 Score=154.91 Aligned_cols=147 Identities=20% Similarity=0.251 Sum_probs=125.6
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCC-CCCCeeEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSD-PQPSITVI 346 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~-~~~~L~~L 346 (854)
..+++..+.++.+|..+.. .++.|+++.|.+... ...+ .. ++++|+.|
T Consensus 21 ~~l~c~~~~l~~iP~~~~~--~l~~L~Ls~N~l~~l----------~~~~-------------------~~~~l~~L~~L 69 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPS--YTALLDLSHNNLSRL----------RAEW-------------------TPTRLTNLHSL 69 (361)
T ss_dssp TEEECCSSCCSSCCSSCCT--TCSEEECCSSCCCEE----------CTTS-------------------SSSCCTTCCEE
T ss_pred CEEEeCCCCcCccCccCCC--CCCEEECCCCCCCcc----------Chhh-------------------hhhcccccCEE
Confidence 3578899999999987653 478999999988641 0011 11 46799999
Q ss_pred EecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccc
Q 003046 347 HLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 347 ~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
+|++|+|++..|..|.+|++|++|+|++|+|+++++. |.+|++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+
T Consensus 70 ~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 70 LLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 9999999977778899999999999999999998886 899999999999999999888999999999999999999999
Q ss_pred ccccccc------ccccccccccCCcc
Q 003046 426 GTVPSSL------LSKNVVLNYAGNIN 446 (854)
Q Consensus 426 g~ip~~l------~~~l~~l~~~~n~~ 446 (854)
.+|..+ +.+++.|++++|..
T Consensus 150 -~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 150 -RFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp -SCCGGGTC----CTTCCEEECCSSCC
T ss_pred -eeCHHHhcCcccCCcCCEEECCCCCC
Confidence 788776 56788999999854
No 311
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.48 E-value=5.7e-14 Score=166.96 Aligned_cols=183 Identities=14% Similarity=0.069 Sum_probs=139.7
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHH-HHHHHHhhcCCCCccCCCCCCCCCCCCCee-EeCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGV-AIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQ 340 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~-~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~-~c~~~~~ 340 (854)
.+..+..|++..+....+++.+..++.|+.+++..+..... ....+..+..+.... ...+ ..... ......+
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~---ls~n---~l~~~~~~~~~~~ 468 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD---ISHT---HTRVAFNGIFNGL 468 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE---CTTS---CCEECCTTTTTTC
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc---cccc---ccccccccccccc
Confidence 45677888999999999999899999999998886654331 111111221111110 0000 01111 1123457
Q ss_pred CCeeEEEecCCCC-cccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 341 PSITVIHLSSKNL-TGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 341 ~~L~~L~Ls~n~l-~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
++|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++++|. |.+|++|+.|+|++|+|++..|..|.+|++|+.|+
T Consensus 469 ~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 548 (635)
T 4g8a_A 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548 (635)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEE
T ss_pred hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEE
Confidence 8999999999985 456788999999999999999999999886 89999999999999999988888999999999999
Q ss_pred cccccccccccccc---ccccccccccCCcccccCC
Q 003046 419 VQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 419 l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
|++|+|++..|..+ ..+++.|++++||+.|.|.
T Consensus 549 Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999997777666 2578999999999999875
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.48 E-value=5e-15 Score=160.87 Aligned_cols=105 Identities=24% Similarity=0.207 Sum_probs=88.7
Q ss_pred CCCCCeeEEEecCCCCcc--cCC-cccccCccCcEEeccCCcccccCC--CCCCCCCccEEEcCCcccCCCCCccccCCC
Q 003046 338 DPQPSITVIHLSSKNLTG--NIP-SDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSSLMNLP 412 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g--~lp-~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 412 (854)
..+++|+.|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.+| .+..+++|+.|+|++|+|+ .+|..+. +
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~ 274 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--A 274 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--S
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--C
Confidence 356799999999999993 233 344678999999999999999774 4777999999999999999 8898887 8
Q ss_pred CCceeecccccccccccccc--ccccccccccCCccc
Q 003046 413 NLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 413 ~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
+|+.|+|++|+|+ .+|. + +.+++.|++++|+..
T Consensus 275 ~L~~L~Ls~N~l~-~~p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 275 KLSVLDLSYNRLD-RNPS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEEEEECCSSCCC-SCCC-TTTSCEEEEEECTTCTTT
T ss_pred CceEEECCCCCCC-CChh-HhhCCCCCEEeccCCCCC
Confidence 9999999999999 4576 4 677899999999754
No 313
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.47 E-value=8.5e-14 Score=155.91 Aligned_cols=158 Identities=18% Similarity=0.210 Sum_probs=135.6
Q ss_pred cccccccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCC
Q 003046 259 YTNLSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS 337 (854)
Q Consensus 259 ~t~~~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~ 337 (854)
...+.+..++.|++..|.++.+|+. +..+..|+.|++..|.+... .+- ..
T Consensus 39 ~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~-------------------~~~----------~~ 89 (390)
T 3o6n_A 39 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEI-------------------DTY----------AF 89 (390)
T ss_dssp CSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEE-------------------CTT----------TT
T ss_pred ccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccccc-------------------Chh----------hc
Confidence 3466788899999999999999988 78999999999999987641 000 12
Q ss_pred CCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCce
Q 003046 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 416 (854)
..+++|+.|+|++|++++..|..|+++++|++|+|++|+|+.+++. |.++++|++|+|++|+|++..|..|..+++|+.
T Consensus 90 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 169 (390)
T 3o6n_A 90 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN 169 (390)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCE
T ss_pred cCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCE
Confidence 3567899999999999987788899999999999999999988887 688999999999999999888888999999999
Q ss_pred eeccccccccccccccccccccccccCCcc
Q 003046 417 LYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 417 L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~ 446 (854)
|+|++|+++ .++...+++++.|++++|..
T Consensus 170 L~l~~n~l~-~~~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 170 LQLSSNRLT-HVDLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCS-BCCGGGCTTCSEEECCSSCC
T ss_pred EECCCCcCC-ccccccccccceeecccccc
Confidence 999999999 67777788889999888743
No 314
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.47 E-value=7.7e-14 Score=165.41 Aligned_cols=158 Identities=18% Similarity=0.210 Sum_probs=131.6
Q ss_pred cccccccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCC
Q 003046 259 YTNLSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS 337 (854)
Q Consensus 259 ~t~~~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~ 337 (854)
.+.+.++.++.|++..|.++.+|+. +..+..|+.|+++.|.+... .|- ..
T Consensus 45 ~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~-------------------~~~----------~~ 95 (597)
T 3oja_B 45 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEI-------------------DTY----------AF 95 (597)
T ss_dssp CSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEE-------------------CTT----------TT
T ss_pred cccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCC-------------------ChH----------Hh
Confidence 3466778889999999999999987 78899999999999887641 110 12
Q ss_pred CCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCce
Q 003046 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 416 (854)
..+++|+.|+|++|.|++..|..|++|++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|+.+++|+.
T Consensus 96 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 175 (597)
T 3oja_B 96 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN 175 (597)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcE
Confidence 3467899999999999987778889999999999999999988887 688999999999999999888888999999999
Q ss_pred eeccccccccccccccccccccccccCCcc
Q 003046 417 LYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 417 L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~ 446 (854)
|+|++|.|+ .+|...+.++..|++++|..
T Consensus 176 L~L~~N~l~-~~~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 176 LQLSSNRLT-HVDLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp EECTTSCCS-BCCGGGCTTCSEEECCSSCC
T ss_pred EECcCCCCC-CcChhhhhhhhhhhcccCcc
Confidence 999999999 56777788888888887743
No 315
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=4.2e-14 Score=172.96 Aligned_cols=141 Identities=20% Similarity=0.247 Sum_probs=120.3
Q ss_pred ccHHHHHHHHhhcCCCCccCCC----CCC--CCCCCC------------CeeEeCCCCCCCeeEEEecCCCCcccCCccc
Q 003046 300 IDGVAIVSVISLYSSADWAQEG----GDP--CLPVPW------------SWLQCNSDPQPSITVIHLSSKNLTGNIPSDL 361 (854)
Q Consensus 300 ~~~~~~~~l~~l~~~~~~~~~~----~dp--c~~~~~------------~~~~c~~~~~~~L~~L~Ls~n~l~g~lp~~~ 361 (854)
.|..++.++|+...-.+|.... .+| | .| .||.|+.. .+++.|+|++|+|+|.+|++|
T Consensus 269 ~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C---~W~~~~~~~~w~~~~GV~C~~~--~~V~~L~Ls~~~L~G~ip~~l 343 (876)
T 4ecn_A 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSL---NWNFNKELDMWGDQPGVDLDNN--GRVTGLSLAGFGAKGRVPDAI 343 (876)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCC---SCCCSSCGGGTTCCTTEEECTT--SCEEEEECTTTCCEEEECGGG
T ss_pred HHHHHHHHHHHHcCCCCCCcCCCcccccCCcc---ccccccccccccCcCceEecCC--CCEEEEECccCCCCCcCchHH
Confidence 3667899999987666897644 467 7 58 99999752 589999999999999999999
Q ss_pred ccCccCcEEec-cCCccccc------------------------------------------------------------
Q 003046 362 TKLSSLVELWL-DGNSLTGP------------------------------------------------------------ 380 (854)
Q Consensus 362 ~~l~~L~~L~L-s~N~l~~~------------------------------------------------------------ 380 (854)
++|++|+.|+| ++|.++|.
T Consensus 344 ~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l 423 (876)
T 4ecn_A 344 GQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRI 423 (876)
T ss_dssp GGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCC
T ss_pred hccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccccc
Confidence 99999999999 77765443
Q ss_pred ----------------CC-CCCCCCCccEEEcCCcccCC-----------------CCCcccc--CCCCCceeecccccc
Q 003046 381 ----------------IP-DFSGCPDLRIIHLEDNQLTG-----------------PLPSSLM--NLPNLRELYVQNNML 424 (854)
Q Consensus 381 ----------------~~-~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~l~~N~l 424 (854)
+| .|++|++|+.|+|++|+|+| .+|..++ +|++|+.|+|++|++
T Consensus 424 ~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l 503 (876)
T 4ecn_A 424 SLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPN 503 (876)
T ss_dssp CCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTT
T ss_pred chhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCC
Confidence 44 48889999999999999998 3999988 999999999999999
Q ss_pred cccccccc--ccccccccccCCc
Q 003046 425 SGTVPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 425 ~g~ip~~l--~~~l~~l~~~~n~ 445 (854)
.|.+|..+ +++|+.|++++|.
T Consensus 504 ~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 504 MTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CCSCCGGGGGCSSCCEEECTTCT
T ss_pred CccChHHHhCCCCCCEEECcCCC
Confidence 99999887 7789999999986
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.47 E-value=1.5e-14 Score=157.44 Aligned_cols=107 Identities=15% Similarity=0.137 Sum_probs=64.8
Q ss_pred CCCeeEEEecCCCCcccCCcccc-cCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
+++|+.|+|++|+|++..|..+. .+++|++|+|++|+|++. +....+++|+.|+|++|+|+ .+|..+..+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWIS 220 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEE
Confidence 34555555555555554444443 455666666666666554 23334666667777777766 3455566777777777
Q ss_pred cccccccccccccc--ccccccccccCCccccc
Q 003046 419 VQNNMLSGTVPSSL--LSKNVVLNYAGNINLHE 449 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~~ 449 (854)
|++|+|+ .+|..+ +.+++.|++++|+..|.
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 7777777 566655 45667777777776653
No 317
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.47 E-value=4.8e-14 Score=165.14 Aligned_cols=177 Identities=12% Similarity=0.012 Sum_probs=122.0
Q ss_pred cceeeeecccCCCCCCCccc-chhhhceeccCCCCCccHHHHHH---HHhhcCCCCccCCCCCCCCCCCCCeeE---eCC
Q 003046 265 PFVLSFKFGKTYDSSRGPLL-NAMEINKYLERNDGSIDGVAIVS---VISLYSSADWAQEGGDPCLPVPWSWLQ---CNS 337 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~i-~~le~l~~L~l~~~~~~~~~~~~---l~~l~~~~~~~~~~~dpc~~~~~~~~~---c~~ 337 (854)
..++.|++..|.++.+|+.+ ..+..|+.|+++.|.+....+.. +..+..++.+.. .-|. ...+. -..
T Consensus 310 ~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L---s~N~---l~~~~~~~~~~ 383 (549)
T 2z81_A 310 EKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL---SQNH---LRSMQKTGEIL 383 (549)
T ss_dssp TTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC---TTSC---CCCHHHHHHHG
T ss_pred ccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc---cCCc---ccccccchhhh
Confidence 45778888888888888775 56888888888888887654433 223333333311 1111 11110 012
Q ss_pred CCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCC------------------CCCCCccEEEcCCcc
Q 003046 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF------------------SGCPDLRIIHLEDNQ 399 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~------------------~~l~~L~~L~Ls~N~ 399 (854)
..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+..+ ..+++|+.|+|++|+
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~ 462 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNK 462 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCc
Confidence 34567788888888887 67777777777777777777776544321 368889999999999
Q ss_pred cCCCCCccccCCCCCceeecccccccccccccc--ccccccccccCCcccccC
Q 003046 400 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 400 l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~~~~~ 450 (854)
|+ .+|. ...+++|+.|+|++|+|++.+|..+ +.+++.|++++|+..|.+
T Consensus 463 l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 463 LK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp CS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred cC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 98 6776 5678899999999999996555544 677889999999988764
No 318
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.47 E-value=2.3e-14 Score=156.95 Aligned_cols=173 Identities=16% Similarity=0.164 Sum_probs=115.8
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccH--HHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG--VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~--~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
++|+.|+|..|.++.+|+. +..+..|+.|+++.|.+.. ..+..+..+ .+..+.. .-|. ...++. .-.+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l---~~n~---l~~l~~--~~~~ 193 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRI---SEAK---LTGIPK--DLPE 193 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBC---CSSB---CSSCCS--SSCS
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEEC---cCCC---CCccCc--cccC
Confidence 4677777788888877775 7777888888888777653 111111111 1222110 0010 111111 1125
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 420 (854)
+|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++. +..+++|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECC
Confidence 788888888888877777888888888888888888887774 778888888888888888 788888888888888888
Q ss_pred ccccccccccccc---------cccccccccCCcccc
Q 003046 421 NNMLSGTVPSSLL---------SKNVVLNYAGNINLH 448 (854)
Q Consensus 421 ~N~l~g~ip~~l~---------~~l~~l~~~~n~~~~ 448 (854)
+|+|+ .+|...+ ..+..|++.+|+..+
T Consensus 273 ~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 273 TNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp SSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 88888 5554432 235677788887653
No 319
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.47 E-value=1.7e-13 Score=135.69 Aligned_cols=121 Identities=25% Similarity=0.276 Sum_probs=104.7
Q ss_pred CCCeeEeCCCC--------CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcc
Q 003046 329 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 399 (854)
Q Consensus 329 ~~~~~~c~~~~--------~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~ 399 (854)
.|..+.|+..+ .++|+.|+|++|+|++..+..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 46777775432 46899999999999976667789999999999999999998887 7899999999999999
Q ss_pred cCCCCCccccCCCCCceeecccccccccccccc---ccccccccccCCcccccC
Q 003046 400 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 400 l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~ 450 (854)
|++..+..|..+++|+.|+|++|+|+ .+|... +.+++.|++++|+..|..
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99777777899999999999999999 677665 567889999999988754
No 320
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.47 E-value=5.9e-14 Score=167.62 Aligned_cols=176 Identities=13% Similarity=0.080 Sum_probs=136.3
Q ss_pred cccceeeeecccCCCC-CCCcccchhhhceeccCCCCC-ccH-HHHHHHHhh------cCCCCccCCCCCCCCCCCCCee
Q 003046 263 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGS-IDG-VAIVSVISL------YSSADWAQEGGDPCLPVPWSWL 333 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s-~lpP~i~~le~l~~L~l~~~~-~~~-~~~~~l~~l------~~~~~~~~~~~dpc~~~~~~~~ 333 (854)
.++.|+.|+|+.|.++ .+|+.|..+..|+.|+++.|+ +.. ..+..+..+ ..++.+.. .-|. ...+
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L---~~n~---l~~i 320 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYI---GYNN---LKTF 320 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEEC---CSSC---CSSC
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEEC---CCCc---CCcc
Confidence 4678999999999855 567779999999999999998 887 677777776 55555422 1121 1222
Q ss_pred Ee--CCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCC-ccEEEcCCcccCCCCCccccC
Q 003046 334 QC--NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPD-LRIIHLEDNQLTGPLPSSLMN 410 (854)
Q Consensus 334 ~c--~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~-L~~L~Ls~N~l~g~~p~~~~~ 410 (854)
+- ....+++|+.|+|++|+++|.+| .|+++++|+.|+|++|+|+.+++.+.++++ |+.|+|++|+|+ .+|..+..
T Consensus 321 p~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~ 398 (636)
T 4eco_A 321 PVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA 398 (636)
T ss_dssp CCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT
T ss_pred CchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhh
Confidence 22 23467789999999999998899 888899999999999999866667888888 999999999988 78888877
Q ss_pred CC--CCceeeccccccccccccccc---------cccccccccCCcc
Q 003046 411 LP--NLRELYVQNNMLSGTVPSSLL---------SKNVVLNYAGNIN 446 (854)
Q Consensus 411 l~--~L~~L~l~~N~l~g~ip~~l~---------~~l~~l~~~~n~~ 446 (854)
++ +|+.|+|++|+|+|.+|..+. .+++.|++++|..
T Consensus 399 ~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l 445 (636)
T 4eco_A 399 KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQI 445 (636)
T ss_dssp TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCC
T ss_pred cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCcc
Confidence 55 889999999999887776653 3677888888754
No 321
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.47 E-value=7.9e-15 Score=172.09 Aligned_cols=179 Identities=20% Similarity=0.158 Sum_probs=124.7
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCC-------------ccHHHHHHHHhhcCCCCccCCCCCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGS-------------IDGVAIVSVISLYSSADWAQEGGDPCLPVP 329 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~-------------~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~ 329 (854)
..+.|+.|+|+.|.++.||+.|..+..|+.|++++|. .....+..+..+..+..+........ ..
T Consensus 347 ~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--~~ 424 (567)
T 1dce_A 347 TDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--DD 424 (567)
T ss_dssp TTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--HH
T ss_pred cCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--ch
Confidence 3567788999999999999999999999999997664 11111222222221111100000000 00
Q ss_pred CCe--eE---eCCCCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCC
Q 003046 330 WSW--LQ---CNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL 404 (854)
Q Consensus 330 ~~~--~~---c~~~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~ 404 (854)
... +. ...-....|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+.+|+.|++|++|+.|+|++|+|++ +
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-l 501 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-V 501 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-C
Confidence 000 00 000011258889999999994 786 999999999999999999766678899999999999999995 7
Q ss_pred CccccCCCCCceeecccccccccc-cccc--ccccccccccCCccc
Q 003046 405 PSSLMNLPNLRELYVQNNMLSGTV-PSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 405 p~~~~~l~~L~~L~l~~N~l~g~i-p~~l--~~~l~~l~~~~n~~~ 447 (854)
| .|++|++|+.|+|++|+|++.. |..+ +++|+.|++++|+..
T Consensus 502 p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 502 D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 7 8999999999999999999655 7777 778889999998753
No 322
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.47 E-value=8.5e-14 Score=163.79 Aligned_cols=158 Identities=18% Similarity=0.203 Sum_probs=125.5
Q ss_pred cccceeeeecccCCCCC-CCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~-lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
.++.|+.|+|+.|.++. +|+.+..+..|+.|+++.|++.... .+.-....++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---------------------------~~~~~~~~l~ 403 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF---------------------------KVALMTKNMS 403 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT---------------------------HHHHTTTTCT
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc---------------------------cchhhhcCCC
Confidence 35567777777777777 4445777777888888777765310 0001123567
Q ss_pred CeeEEEecCCCCcccCCc-ccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 342 SITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
+|+.|+|++|++++.+|. .+..+++|+.|+|++|+|++.+|. +. ++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 404 ~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L 480 (562)
T 3a79_B 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNV 480 (562)
T ss_dssp TCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEEC
T ss_pred CCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEEC
Confidence 999999999999986776 488899999999999999886664 33 79999999999999 79988889999999999
Q ss_pred ccccccccccccc---ccccccccccCCcccccCC
Q 003046 420 QNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 420 ~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
++|+|+ .+|... +++++.|++++|+..|.+.
T Consensus 481 ~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 481 ASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 999999 888873 6678899999999998753
No 323
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.47 E-value=2.9e-14 Score=164.19 Aligned_cols=176 Identities=18% Similarity=0.117 Sum_probs=119.0
Q ss_pred ceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCCe
Q 003046 266 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~~~L 343 (854)
.++.|+|+.|.++.++|. +..+..|+.|+++.|.+....+.++.++..++.+...+ | ....+.. ...++++|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~---n---~l~~~~~~~~~~l~~L 106 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS---N---RLKLIPLGVFTGLSNL 106 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS---S---CCCSCCTTSSTTCTTC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC---C---cCCccCcccccCCCCC
Confidence 456677777777777654 77777777777777776654444444444444332110 1 0111111 12456788
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|++++..|..|.++++|+.|+|++|+|++..+. |.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 107 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 186 (477)
T 2id5_A 107 TKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESC
T ss_pred CEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCC
Confidence 8888888888877788888888888888888888887664 788888888888888888655567888888888888888
Q ss_pred cccccccccc--ccccccccccCCccc
Q 003046 423 MLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
.+++..+..+ +.+++.|++++|+..
T Consensus 187 ~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 187 NINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp CCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred cCcEeChhhcccCcccceeeCCCCccc
Confidence 8884333333 556677777776543
No 324
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.47 E-value=7.5e-14 Score=159.47 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=21.8
Q ss_pred ccceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccH
Q 003046 264 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDG 302 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~~~~ 302 (854)
++.|+.|+|+.|.++.++| .+..+..|+.|+++.|.+..
T Consensus 78 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 117 (455)
T 3v47_A 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDG 117 (455)
T ss_dssp CTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBT
T ss_pred cccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCc
Confidence 3455556666666555533 35556666666666555554
No 325
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.46 E-value=1.4e-13 Score=163.70 Aligned_cols=153 Identities=16% Similarity=0.148 Sum_probs=126.0
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
+.++.|+|+.|.++.+||. |.++..|+.|+|+.|++..+ ++- ...++++|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i-------------------~~~----------~f~~L~~L 102 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI-------------------EDG----------AYQSLSHL 102 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCc-------------------Chh----------HhcCCCCC
Confidence 3678999999999999986 99999999999999987641 000 12456799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCC-CCCccccCCCCCceeeccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~ 421 (854)
++|+|++|+|++..|..|.+|++|++|+|++|+|+++++. |++|++|+.|+|++|+|++ .+|..++.+++|+.|+|++
T Consensus 103 ~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 182 (635)
T 4g8a_A 103 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 182 (635)
T ss_dssp CEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCS
T ss_pred CEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccC
Confidence 9999999999966667899999999999999999998886 8999999999999999985 4688999999999999999
Q ss_pred ccccccccccc--cccc----ccccccCCcc
Q 003046 422 NMLSGTVPSSL--LSKN----VVLNYAGNIN 446 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l----~~l~~~~n~~ 446 (854)
|+|++..|..+ +.++ ..++++.|..
T Consensus 183 N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l 213 (635)
T 4g8a_A 183 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 213 (635)
T ss_dssp SCCCEECGGGGHHHHTCTTCCCEEECTTCCC
T ss_pred ccccccccccccchhhhhhhhhhhhcccCcc
Confidence 99995555554 2222 2455566654
No 326
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.46 E-value=4.1e-14 Score=154.89 Aligned_cols=176 Identities=27% Similarity=0.226 Sum_probs=135.2
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
.++.|+.|+|+.|.++.+|+.+. ..|+.|+++.|.+.......+..+..+..+... +..-. ...........+ +
T Consensus 100 ~l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~-~n~l~--~~~~~~~~~~~l-~ 173 (332)
T 2ft3_A 100 PLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG-GNPLE--NSGFEPGAFDGL-K 173 (332)
T ss_dssp TCTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECC-SCCCB--GGGSCTTSSCSC-C
T ss_pred CcCCCCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECC-CCccc--cCCCCcccccCC-c
Confidence 35688999999999999998876 789999999998876443445555444443221 11100 000001112233 8
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|+.|+|++|+++ .+|..+. ++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..|..+..+++|+.|+|++
T Consensus 174 L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 250 (332)
T 2ft3_A 174 LNYLRISEAKLT-GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDN 250 (332)
T ss_dssp CSCCBCCSSBCS-SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCS
T ss_pred cCEEECcCCCCC-ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCC
Confidence 999999999999 5887765 7999999999999998865 89999999999999999988888999999999999999
Q ss_pred ccccccccccc--ccccccccccCCcccc
Q 003046 422 NMLSGTVPSSL--LSKNVVLNYAGNINLH 448 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~~l~~~~n~~~~ 448 (854)
|+|+ .+|..+ +.+++.|++++|....
T Consensus 251 N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 251 NKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp SCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 9999 899887 6788999999987654
No 327
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.46 E-value=1.3e-13 Score=160.54 Aligned_cols=155 Identities=17% Similarity=0.218 Sum_probs=128.9
Q ss_pred cccceeeeecccCCCCC-CCcccchhhhceeccCCCCCccHHH--HHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCC
Q 003046 263 SLPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGVA--IVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDP 339 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~-lpP~i~~le~l~~L~l~~~~~~~~~--~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~ 339 (854)
.++.|+.|+|+.|.++. +|+.+..+..|+.|+++.|.+.... +..+ ..
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~-----------------------------~~ 372 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMT-----------------------------TQ 372 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHH-----------------------------TT
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHH-----------------------------hh
Confidence 45678888999988888 5566888888999999988876421 1111 23
Q ss_pred CCCeeEEEecCCCCcccCCcc-cccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCcee
Q 003046 340 QPSITVIHLSSKNLTGNIPSD-LTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~-~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 417 (854)
+++|+.|+|++|++++.+|.. +..+++|+.|+|++|+|++..|. +. ++|+.|+|++|+|+ .+|..+..+++|+.|
T Consensus 373 l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L 449 (520)
T 2z7x_B 373 MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQEL 449 (520)
T ss_dssp CTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEE
Confidence 568999999999999767765 88899999999999999887664 43 79999999999999 899988899999999
Q ss_pred ecccccccccccccc---ccccccccccCCcccccC
Q 003046 418 YVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEG 450 (854)
Q Consensus 418 ~l~~N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~ 450 (854)
+|++|+|+ .+|... +.+++.|++++|+..|.+
T Consensus 450 ~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 450 NVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 99999999 888873 567889999999999875
No 328
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.45 E-value=9.1e-14 Score=150.64 Aligned_cols=170 Identities=22% Similarity=0.227 Sum_probs=131.3
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
.+..|+.|++..+.++.+| .+..+..|+.|+++.|.+..... +..+..++.+... -|. ...+. ....+++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~---~n~---l~~~~-~~~~l~~ 108 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELS---GNP---LKNVS-AIAGLQS 108 (308)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC---SCC---CSCCG-GGTTCTT
T ss_pred HcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEcc---CCc---CCCch-hhcCCCC
Confidence 4678899999999999996 68999999999999998876333 5555555544221 111 11121 2446789
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
|+.|+|++|+|++ +|. +..+++|+.|+|++|+|++.++ +..+++|+.|+|++|+|++ ++. +..+++|+.|+|++|
T Consensus 109 L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 109 IKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDN 183 (308)
T ss_dssp CCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSS
T ss_pred CCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCC
Confidence 9999999999994 554 8999999999999999998766 8889999999999999995 554 899999999999999
Q ss_pred ccccccccccccccccccccCCccc
Q 003046 423 MLSGTVPSSLLSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~g~ip~~l~~~l~~l~~~~n~~~ 447 (854)
+|++..+-.-+.+++.|++++|...
T Consensus 184 ~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 184 KISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred ccCcChhhcCCCCCCEEEccCCccC
Confidence 9994444333778889999988643
No 329
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.45 E-value=9e-14 Score=149.42 Aligned_cols=105 Identities=27% Similarity=0.399 Sum_probs=85.2
Q ss_pred CCCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCcee
Q 003046 338 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 338 ~~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 417 (854)
..+++|+.|+|++|+|++ + +.+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++..| +..+++|+.|
T Consensus 109 ~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 109 KDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp TTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred ccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 356789999999999985 4 4688899999999999999886 678889999999999999985444 8899999999
Q ss_pred ecccccccccccccc-ccccccccccCCcccc
Q 003046 418 YVQNNMLSGTVPSSL-LSKNVVLNYAGNINLH 448 (854)
Q Consensus 418 ~l~~N~l~g~ip~~l-~~~l~~l~~~~n~~~~ 448 (854)
+|++|+|+ .+|.-- +.+++.|++++|+..+
T Consensus 184 ~L~~N~i~-~l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 184 YLSKNHIS-DLRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ECCSSCCC-BCGGGTTCTTCSEEEEEEEEEEC
T ss_pred ECCCCcCC-CChhhccCCCCCEEECcCCcccC
Confidence 99999998 565411 6678888888886544
No 330
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.45 E-value=1.6e-13 Score=138.03 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=109.8
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
+.++++.|.++.+|+.+. ..++.|+++.|.+... .. ....+++|+.|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~i-----------p~-------------------~~~~l~~L~~L~ 60 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTLV-----------PK-------------------ELSNYKHLTLID 60 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCCSC-----------CG-------------------GGGGCTTCCEEE
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCchh-----------HH-------------------HhhcccCCCEEE
Confidence 357788999999998764 5789999999987641 00 113467899999
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 61 Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999999987778899999999999999999999986 9999999999999999996666679999999999999999985
Q ss_pred cc
Q 003046 427 TV 428 (854)
Q Consensus 427 ~i 428 (854)
.-
T Consensus 141 ~c 142 (193)
T 2wfh_A 141 DC 142 (193)
T ss_dssp SG
T ss_pred CC
Confidence 43
No 331
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.45 E-value=1.4e-14 Score=160.01 Aligned_cols=171 Identities=18% Similarity=0.117 Sum_probs=83.3
Q ss_pred ceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeC-CCCCCCe
Q 003046 266 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPSI 343 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~-~~~~~~L 343 (854)
.++.|+|+.|.++.+|+ .+..+..|+.|+++.|.+.......+.++..++.+... -| ....+... ...+++|
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls---~n---~l~~~~~~~~~~l~~L 126 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS---YN---YLSNLSSSWFKPLSSL 126 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC---SS---CCSSCCHHHHTTCTTC
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC---CC---cCCcCCHhHhCCCccC
Confidence 56778888888888887 48888888888888887664222222222222221100 00 00011100 1233445
Q ss_pred eEEEecCCCCcccCCc--ccccCccCcEEeccCC-cccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 344 TVIHLSSKNLTGNIPS--DLTKLSSLVELWLDGN-SLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~--~~~~l~~L~~L~Ls~N-~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
+.|+|++|+|+ .+|. .|.++++|+.|+|++| .+++.++. |.++++|+.|+|++|++++..|..|.++++|+.|+|
T Consensus 127 ~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 205 (353)
T 2z80_A 127 TFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205 (353)
T ss_dssp SEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred CEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecC
Confidence 55555555555 2332 4444555555555554 24443332 444555555555555555444455555555555555
Q ss_pred ccccccccccccc---ccccccccccCC
Q 003046 420 QNNMLSGTVPSSL---LSKNVVLNYAGN 444 (854)
Q Consensus 420 ~~N~l~g~ip~~l---~~~l~~l~~~~n 444 (854)
++|+++ .+|..+ +.+++.|++++|
T Consensus 206 ~~n~l~-~~~~~~~~~~~~L~~L~L~~n 232 (353)
T 2z80_A 206 HMKQHI-LLLEIFVDVTSSVECLELRDT 232 (353)
T ss_dssp ECSCST-THHHHHHHHTTTEEEEEEESC
T ss_pred CCCccc-cchhhhhhhcccccEEECCCC
Confidence 555554 444333 334444455444
No 332
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.45 E-value=9.2e-14 Score=167.26 Aligned_cols=112 Identities=22% Similarity=0.176 Sum_probs=66.8
Q ss_pred CCCeeEEEecCCCCcccCC--------cccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccC
Q 003046 340 QPSITVIHLSSKNLTGNIP--------SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMN 410 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp--------~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 410 (854)
+++|+.|+|++|+|++..+ ..|.++++|+.|+|++|+|+.+++. |.++++|+.|+|++|+|++..+..|.+
T Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 582 (680)
T 1ziw_A 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNN 582 (680)
T ss_dssp CTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCC
Confidence 3445555555555543211 1245555555566666666555443 666677777777777777544455666
Q ss_pred CCCCceeeccccccccccccc---cccccccccccCCcccccCC
Q 003046 411 LPNLRELYVQNNMLSGTVPSS---LLSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 411 l~~L~~L~l~~N~l~g~ip~~---l~~~l~~l~~~~n~~~~~~~ 451 (854)
+++|+.|+|++|+|++..|.. .+.+++.|++++||+.|.+.
T Consensus 583 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 583 QVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 777777777777777333332 24567778888888888765
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.45 E-value=2.1e-14 Score=155.72 Aligned_cols=177 Identities=16% Similarity=0.085 Sum_probs=119.0
Q ss_pred cccceeeeecccCCCCCCCcc-c--chhhhceeccCCCCCccHH----HHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-L--NAMEINKYLERNDGSIDGV----AIVSVISLYSSADWAQEGGDPCLPVPWSWLQC 335 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i--~~le~l~~L~l~~~~~~~~----~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c 335 (854)
.++.|+.|+|..|.++..+|. + ..+..|+.|+++.|.+... ....+..+..++.+... -| ....+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls---~n---~l~~~~~ 162 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIA---QA---HSPAFSC 162 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEE---CC---SSCCCCT
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEee---CC---CcchhhH
Confidence 345688899999998866655 5 8889999999998887641 11222233333333111 11 0122222
Q ss_pred -CCCCCCCeeEEEecCCCCccc--C--CcccccCccCcEEeccCCcccccCCC----CCCCCCccEEEcCCcccCCCCCc
Q 003046 336 -NSDPQPSITVIHLSSKNLTGN--I--PSDLTKLSSLVELWLDGNSLTGPIPD----FSGCPDLRIIHLEDNQLTGPLPS 406 (854)
Q Consensus 336 -~~~~~~~L~~L~Ls~n~l~g~--l--p~~~~~l~~L~~L~Ls~N~l~~~~~~----~~~l~~L~~L~Ls~N~l~g~~p~ 406 (854)
....+++|+.|+|++|++.+. + +..+.++++|++|+|++|+|+..++. +.++++|++|+|++|+|++..|.
T Consensus 163 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~ 242 (310)
T 4glp_A 163 EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNP 242 (310)
T ss_dssp TSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCS
T ss_pred HHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchh
Confidence 234567888888888887642 2 22346778888888888888754432 45678888888888888877777
Q ss_pred cccCC---CCCceeeccccccccccccccccccccccccCCcc
Q 003046 407 SLMNL---PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 407 ~~~~l---~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~ 446 (854)
.++.+ ++|+.|+|++|+|+ .+|..++++++.|++++|..
T Consensus 243 ~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 243 SAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRL 284 (310)
T ss_dssp CCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCC
T ss_pred hHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcC
Confidence 77776 58888888888888 78888888888888888754
No 334
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.44 E-value=5.1e-13 Score=132.18 Aligned_cols=131 Identities=18% Similarity=0.199 Sum_probs=109.3
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
+.+++..+.++.+|..+. +.++.|+++.|.+.. ..+- ....+++|+.|+
T Consensus 10 ~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L~~L~ 58 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQS-------------------LPHG----------VFDKLTQLTKLS 58 (177)
T ss_dssp TEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCSEEE
T ss_pred CEEEecCCCCccCCCCCC--CCCcEEEeCCCcccE-------------------eCHH----------HhcCcccccEEE
Confidence 456778999999987654 688999999987763 0100 113457999999
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..+..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++++
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 59 LSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 999999966666789999999999999999998887 7899999999999999996666667899999999999999997
Q ss_pred ccc
Q 003046 427 TVP 429 (854)
Q Consensus 427 ~ip 429 (854)
..|
T Consensus 139 ~~~ 141 (177)
T 2o6r_A 139 SCP 141 (177)
T ss_dssp CHH
T ss_pred cCc
Confidence 776
No 335
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.44 E-value=1.5e-13 Score=162.16 Aligned_cols=169 Identities=21% Similarity=0.201 Sum_probs=114.5
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
|..|+.|+|..|.++.+| .|..+..|+.|+|+.|.+..... +..+..+..+.. .-|. ...+. ....+++|
T Consensus 42 L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L---s~N~---l~~l~-~l~~l~~L 111 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL---DENK---IKDLS-SLKDLKKL 111 (605)
T ss_dssp HTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC---CSSC---CCCCT-TSTTCTTC
T ss_pred CCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC---cCCC---CCCCh-hhccCCCC
Confidence 344555555555555554 35555555555555555443221 333333333311 1110 01111 23456789
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++ + +.+..|++|+.|+|++|+|+++ +.+..|++|+.|+|++|+|++..| +..|++|+.|+|++|+
T Consensus 112 ~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 112 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 999999999994 4 4689999999999999999987 678899999999999999996655 8999999999999999
Q ss_pred cccccccc-cccccccccccCCcccc
Q 003046 424 LSGTVPSS-LLSKNVVLNYAGNINLH 448 (854)
Q Consensus 424 l~g~ip~~-l~~~l~~l~~~~n~~~~ 448 (854)
|+ .+|.- -+.+|..|++++|+...
T Consensus 187 i~-~l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 187 IS-DLRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CC-BCGGGTTCTTCSEEECCSEEEEC
T ss_pred CC-CChHHccCCCCCEEEccCCcCcC
Confidence 99 45532 27788899999887644
No 336
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.44 E-value=1.5e-13 Score=163.13 Aligned_cols=177 Identities=19% Similarity=0.149 Sum_probs=121.3
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCC-eeE-eCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWS-WLQ-CNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~-~~~-c~~~~~~ 341 (854)
++.|+.|+|+.|.++.+|+.+..+..|+.|+++.|.+....+..+..+..+..+... -|. .. .+. -....++
T Consensus 277 l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~---~n~---~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 277 FSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK---GNT---KRLELGTGCLENLE 350 (606)
T ss_dssp CTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC---SCS---SCCBCCSSTTTTCT
T ss_pred ccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC---CCC---cccccchhhhhccC
Confidence 567888999999999999889889999999999888776544555555544444221 110 00 000 0133566
Q ss_pred CeeEEEecCCCCcccC--CcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCcc-ccCCCCCcee
Q 003046 342 SITVIHLSSKNLTGNI--PSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSS-LMNLPNLREL 417 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~l--p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L 417 (854)
+|+.|+|++|++++.. |..+.++++|+.|+|++|++++.+|. |..+++|+.|+|++|++++..|.. +..+++|+.|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 7777777777777554 66777777777777777777776664 677777777777777777665543 7777777777
Q ss_pred ecccccccccccccc--ccccccccccCCcc
Q 003046 418 YVQNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 418 ~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~ 446 (854)
+|++|.+++..|..+ +++++.|++++|..
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 461 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHF 461 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBC
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCC
Confidence 777777775555555 56677777777753
No 337
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.43 E-value=2.4e-13 Score=161.21 Aligned_cols=154 Identities=15% Similarity=0.140 Sum_probs=124.5
Q ss_pred cceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
+.++.|+|+.|.++.++| .+..+..|+.|+++.|.+... .|- ...++++|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i-------------------~~~----------~~~~l~~L 82 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETI-------------------EDK----------AWHGLHHL 82 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccccc-------------------CHH----------Hhhchhhc
Confidence 567899999999999998 599999999999999987641 010 12346789
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCC-CCCccccCCCCCceeeccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~ 421 (854)
+.|+|++|+|++..|..|++|++|++|+|++|++++.++. ++++++|++|+|++|++++ .+|..|+++++|+.|+|++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 9999999999977799999999999999999999988754 8999999999999999986 5799999999999999999
Q ss_pred ccccccccccc--cccc----ccccccCCccc
Q 003046 422 NMLSGTVPSSL--LSKN----VVLNYAGNINL 447 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l----~~l~~~~n~~~ 447 (854)
|++++..|..+ +.++ ..|++++|...
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~ 194 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPID 194 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCC
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcc
Confidence 99995555544 3333 36777777644
No 338
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=1.9e-13 Score=134.52 Aligned_cols=106 Identities=25% Similarity=0.313 Sum_probs=91.1
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 420 (854)
+.+.|++++|+|+ .+|..+. ++|+.|+|++|+|++++|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4578999999999 6888774 8999999999999998776 8899999999999999997777778999999999999
Q ss_pred ccccccccccc-c--ccccccccccCCcccccCC
Q 003046 421 NNMLSGTVPSS-L--LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 421 ~N~l~g~ip~~-l--~~~l~~l~~~~n~~~~~~~ 451 (854)
+|+|+ .+|.. + +.+++.|++++|+..|.+.
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99999 56655 3 5678899999999988764
No 339
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.43 E-value=1.1e-13 Score=152.19 Aligned_cols=169 Identities=17% Similarity=0.215 Sum_probs=104.5
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+++.|.++.+++ +..+..|+.|++..|.+..... +..+..+..+.. .-|. ...+.. ...+++|
T Consensus 176 l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l---~~n~---l~~~~~-~~~l~~L 245 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI---GNNK---ITDLSP-LANLSQL 245 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC---CSSC---CCCCGG-GTTCTTC
T ss_pred CCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc---cCCc---cCCCcc-hhcCCCC
Confidence 4456666666666666665 5666666666666665543221 233333333211 1110 111111 3355677
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|++++ + +.+..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++..|..++.+++|+.|+|++|+
T Consensus 246 ~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 246 TWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp CEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred CEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 777777777774 3 3577777777777777777765 456777777777777777777777777777777777777777
Q ss_pred cccccccccccccccccccCCc
Q 003046 424 LSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 424 l~g~ip~~l~~~l~~l~~~~n~ 445 (854)
+++..|-.-+++++.|++++|+
T Consensus 323 l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 323 ITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCCCGGGGGCTTCSEESSSCC-
T ss_pred cccccChhhhhccceeehhhhc
Confidence 7755554446777777777775
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.43 E-value=1.7e-13 Score=148.48 Aligned_cols=156 Identities=20% Similarity=0.201 Sum_probs=123.6
Q ss_pred cccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
.++.|+.|+|+.|.++.+||. +..+..|+.|+++.|++.... .+. ...| ...++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~------------~~~~-----------~~~l~ 197 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGER--GLM------------AALC-----------PHKFP 197 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHH--HHH------------TTSC-----------TTSSC
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccch--hhh------------HHHh-----------hhcCC
Confidence 467889999999999999975 899999999999999865311 000 0111 12456
Q ss_pred CeeEEEecCCCCcccCCc----ccccCccCcEEeccCCcccccCC-CCCCC---CCccEEEcCCcccCCCCCccccCCCC
Q 003046 342 SITVIHLSSKNLTGNIPS----DLTKLSSLVELWLDGNSLTGPIP-DFSGC---PDLRIIHLEDNQLTGPLPSSLMNLPN 413 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~----~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l---~~L~~L~Ls~N~l~g~~p~~~~~l~~ 413 (854)
+|+.|+|++|+|+ .+|. .+.++++|++|+|++|+|++..| .+..+ ++|+.|+|++|+|+ .+|..+. ++
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 8999999999998 4554 25788999999999999999854 46665 79999999999999 7888875 79
Q ss_pred Cceeecccccccccccc-ccccccccccccCCcccc
Q 003046 414 LRELYVQNNMLSGTVPS-SLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 414 L~~L~l~~N~l~g~ip~-~l~~~l~~l~~~~n~~~~ 448 (854)
|+.|+|++|+|++ +|. .-+++++.|++++|+...
T Consensus 274 L~~L~Ls~N~l~~-~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 274 LRVLDLSSNRLNR-APQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECCSCCCCS-CCCTTSCCCCSCEECSSTTTSC
T ss_pred CCEEECCCCcCCC-CchhhhCCCccEEECcCCCCCC
Confidence 9999999999995 443 336888999999998643
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.42 E-value=1.3e-13 Score=143.47 Aligned_cols=149 Identities=17% Similarity=0.087 Sum_probs=107.2
Q ss_pred ceeeeecccCCCCCCCc-ccchhhhceeccCCCCC-ccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 266 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGS-IDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~-~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
.++.|+|..|.++.+|+ .+..+..|+.|+++.|. +...... ...++++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~-----------------------------~f~~l~~L 82 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESH-----------------------------SFYNLSKV 82 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTT-----------------------------TEESCTTC
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHh-----------------------------HcCCCcCC
Confidence 56788889999999988 48889999999998886 6531000 01234577
Q ss_pred eEEEecC-CCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCcc---EEEcCCc-ccCCCCCccccCCCCCc-ee
Q 003046 344 TVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLR---IIHLEDN-QLTGPLPSSLMNLPNLR-EL 417 (854)
Q Consensus 344 ~~L~Ls~-n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L 417 (854)
+.|+|++ |+|++..+..|.++++|+.|+|++|+|++.+ .|..+++|+ .|+|++| +|++..+..|.++++|+ .|
T Consensus 83 ~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 83 THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFP-DLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTL 161 (239)
T ss_dssp CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCC-CCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEE
T ss_pred cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcccc-ccccccccccccEEECCCCcchhhcCcccccchhcceeEE
Confidence 8888887 7887555567777888888888888887744 377777776 8888888 77755555677778888 88
Q ss_pred eccccccccccccccc--cccccccccCCc
Q 003046 418 YVQNNMLSGTVPSSLL--SKNVVLNYAGNI 445 (854)
Q Consensus 418 ~l~~N~l~g~ip~~l~--~~l~~l~~~~n~ 445 (854)
+|++|+|+ .+|...+ .+++.|++++|+
T Consensus 162 ~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 162 KLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp ECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred EcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 88888887 7776653 346677777774
No 342
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.41 E-value=3.7e-13 Score=142.37 Aligned_cols=146 Identities=21% Similarity=0.257 Sum_probs=99.8
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|..|.++.+| .+..+..|+.|+++.|.+.... + ...+++|
T Consensus 40 l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~-------------------~------------l~~l~~L 87 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLS-------------------P------------LKDLTKL 87 (263)
T ss_dssp HTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCG-------------------G------------GTTCSSC
T ss_pred cCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCCh-------------------h------------hccCCCC
Confidence 456677777777777776 5667777777777777665310 0 1245678
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++ +|... . ++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+
T Consensus 88 ~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 88 EELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp CEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSC
T ss_pred CEEECCCCccCC-cCccc-c-CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCc
Confidence 888888888873 55433 3 7788888888888764 457778888888888888874 44 57778888888888888
Q ss_pred ccccccccc--ccccccccccCCccccc
Q 003046 424 LSGTVPSSL--LSKNVVLNYAGNINLHE 449 (854)
Q Consensus 424 l~g~ip~~l--~~~l~~l~~~~n~~~~~ 449 (854)
|++. ..+ +.+++.|++++|+..+.
T Consensus 162 i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 162 ITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred Ccch--HHhccCCCCCEEeCCCCcccCC
Confidence 8744 222 56677777777765544
No 343
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.41 E-value=1.2e-13 Score=132.44 Aligned_cols=127 Identities=17% Similarity=0.189 Sum_probs=99.6
Q ss_pred ccceeeeecccCCCC--CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 264 LPFVLSFKFGKTYDS--SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~n~~s--~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
.+.++.|+|+.|.++ .+|+.+..+..|+.|+++.|.+... . ....++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------~--------------------~~~~l~ 64 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-----------A--------------------NLPKLN 64 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-----------T--------------------TCCCCT
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-----------h--------------------hhhcCC
Confidence 356788889999988 8888888888888888888877640 0 112456
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccC--CCCCCCCCccEEEcCCcccCCCCC---ccccCCCCCce
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP---SSLMNLPNLRE 416 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~ 416 (854)
+|+.|+|++|+|++.+|..+.++++|+.|+|++|+|++.+ +.+..+++|+.|+|++|+|++..+ ..+..+++|+.
T Consensus 65 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 144 (149)
T 2je0_A 65 KLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTY 144 (149)
T ss_dssp TCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCE
T ss_pred CCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccc
Confidence 8888888888888778888888888888888888888854 558888888888888888885544 47888888888
Q ss_pred eeccc
Q 003046 417 LYVQN 421 (854)
Q Consensus 417 L~l~~ 421 (854)
|++++
T Consensus 145 L~l~d 149 (149)
T 2je0_A 145 LDGYD 149 (149)
T ss_dssp ETTBC
T ss_pred ccCCC
Confidence 88764
No 344
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=4.9e-13 Score=132.17 Aligned_cols=105 Identities=22% Similarity=0.332 Sum_probs=92.4
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
-+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999998 8998775 8999999999999999886 89999999999999999976566689999999999999
Q ss_pred ccccccccccc---ccccccccccCCcccccCC
Q 003046 422 NMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 451 (854)
Q Consensus 422 N~l~g~ip~~l---~~~l~~l~~~~n~~~~~~~ 451 (854)
|+|+ .+|... +.+++.|++++|+..|.+.
T Consensus 91 N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLK-SIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred Cccc-eeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9999 677663 6778999999999988753
No 345
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.39 E-value=4.7e-13 Score=161.04 Aligned_cols=151 Identities=19% Similarity=0.190 Sum_probs=87.8
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
+.++.|+|+.|.++.+|+. +..+..|+.|+++.|.+....+..+.++ ++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-----------------------------~~L 75 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKL-----------------------------PML 75 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHC-----------------------------TTC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcc-----------------------------cCc
Confidence 4678899999999999986 9999999999999988765333344443 345
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|+|++..+..|+++++|++|+|++|++++.+|. |.++++|++|+|++|++++..|..++++++|+.|+|++|
T Consensus 76 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 5555555555522222455555555555555555554443 455555555555555555444555555555555555555
Q ss_pred cccccccccc----ccccccccccCC
Q 003046 423 MLSGTVPSSL----LSKNVVLNYAGN 444 (854)
Q Consensus 423 ~l~g~ip~~l----~~~l~~l~~~~n 444 (854)
++++..|..+ +.+++.|++++|
T Consensus 156 ~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 156 KIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred cccccCHHHhhccccccccEEECCCC
Confidence 5553333221 134445555544
No 346
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.39 E-value=3.7e-13 Score=144.56 Aligned_cols=157 Identities=20% Similarity=0.251 Sum_probs=124.1
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.++| +..+..|+.|+++.|.+.. +..+..+..+..+.. .-|. ...+. ....+++|
T Consensus 67 l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~L---~~n~---i~~~~-~l~~l~~L 136 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD--LSSLKDLKKLKSLSL---EHNG---ISDIN-GLVHLPQL 136 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC--GGGGTTCTTCCEEEC---TTSC---CCCCG-GGGGCTTC
T ss_pred CCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC--ChhhccCCCCCEEEC---CCCc---CCCCh-hhcCCCCC
Confidence 5678899999999999988 8999999999999998876 333555555554422 1121 11111 12357899
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++ + ..+..+++|+.|+|++|+|++.++ +..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+
T Consensus 137 ~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~-~l~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 137 ESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp CEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEEEEE
T ss_pred CEEEccCCcCCc-c-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCC-CCh-hhccCCCCCEEECcCCc
Confidence 999999999995 4 679999999999999999999877 999999999999999999 465 49999999999999999
Q ss_pred ccccccccccccc
Q 003046 424 LSGTVPSSLLSKN 436 (854)
Q Consensus 424 l~g~ip~~l~~~l 436 (854)
++ ..|...+..+
T Consensus 212 i~-~~~~~~~~~l 223 (291)
T 1h6t_A 212 CL-NKPINHQSNL 223 (291)
T ss_dssp EE-CCCEECCSEE
T ss_pred cc-CCcccccccc
Confidence 99 5666554443
No 347
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.38 E-value=1.2e-13 Score=159.52 Aligned_cols=175 Identities=13% Similarity=0.004 Sum_probs=115.2
Q ss_pred ccceeeeecccCCCCCCCc-ccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCC------CCCCeeEeC
Q 003046 264 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLP------VPWSWLQCN 336 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP-~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~------~~~~~~~c~ 336 (854)
.+.|+.|+|+.|.++.++| .|..+..|+.|+++.|.+..... +..+..+..+.. .-|.- .....+..+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L---s~N~l~~l~~~~~L~~L~L~ 107 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL---NNNYVQELLVGPSIETLHAA 107 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEEC---CSSEEEEEEECTTCCEEECC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEe---cCCcCCCCCCCCCcCEEECc
Confidence 3478999999999999987 49999999999999999864221 444444444321 11100 011112221
Q ss_pred CCC--------CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CC-CCCCccEEEcCCcccCCCCCc
Q 003046 337 SDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FS-GCPDLRIIHLEDNQLTGPLPS 406 (854)
Q Consensus 337 ~~~--------~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~-~l~~L~~L~Ls~N~l~g~~p~ 406 (854)
... +++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++.+|. +. .+++|+.|+|++|+|++. |.
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~ 186 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG 186 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc
Confidence 111 35567777777777776677777777777777777777776554 54 577777777777777744 32
Q ss_pred cccCCCCCceeecccccccccccccc--ccccccccccCCcc
Q 003046 407 SLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 407 ~~~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~ 446 (854)
+..+++|+.|+|++|+|+ .+|..+ +.++..|++++|..
T Consensus 187 -~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~Ls~N~l 226 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL 226 (487)
T ss_dssp -CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCC
T ss_pred -cccCCCCCEEECCCCCCC-CCCHhHcCCCCccEEEecCCcC
Confidence 345777778888888777 455445 55677777777754
No 348
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.38 E-value=6.5e-13 Score=163.88 Aligned_cols=151 Identities=19% Similarity=0.178 Sum_probs=89.8
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCcc-HHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSID-GVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~-~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
+.++.|+|+.|.++.++|. +..+..|+.|+++.|... .+.+.++ .++++
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f-----------------------------~~L~~ 74 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAF-----------------------------RNLPN 74 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTT-----------------------------SSCTT
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHh-----------------------------cCCCC
Confidence 5678889999999988654 899999999999887432 1111111 23445
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCC-C--CCCCCCccEEEcCCcccCCCCC-ccccCCCCCceee
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-D--FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELY 418 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~-~--~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~ 418 (854)
|+.|+|++|+|++..|..|.+|++|++|+|++|+|++.+| . |.+|++|++|+|++|++++..| ..|++|++|+.|+
T Consensus 75 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~ 154 (844)
T 3j0a_A 75 LRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSID 154 (844)
T ss_dssp CCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEE
T ss_pred CCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEE
Confidence 6666666666665556666666666666666666655332 2 5556666666666666654433 3456666666666
Q ss_pred cccccccccccccc--c--cccccccccCC
Q 003046 419 VQNNMLSGTVPSSL--L--SKNVVLNYAGN 444 (854)
Q Consensus 419 l~~N~l~g~ip~~l--~--~~l~~l~~~~n 444 (854)
|++|.+++..|..+ + .+++.|++++|
T Consensus 155 Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n 184 (844)
T 3j0a_A 155 FSSNQIFLVCEHELEPLQGKTLSFFSLAAN 184 (844)
T ss_dssp EESSCCCCCCSGGGHHHHHCSSCCCEECCS
T ss_pred CCCCcCCeeCHHHcccccCCccceEECCCC
Confidence 66666654444444 1 34444444444
No 349
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.37 E-value=9.9e-13 Score=154.54 Aligned_cols=154 Identities=16% Similarity=0.149 Sum_probs=125.7
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
..++.|+|+.|.++.+++. +..+..|+.|+++.|.+... .+- ...++++|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i-------------------~~~----------~~~~l~~L 78 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI-------------------EDG----------AYQSLSHL 78 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCcc-------------------Ccc----------cccCchhC
Confidence 3678899999999999875 99999999999999987641 000 12345789
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCC-CCCCCCCccEEEcCCcccCC-CCCccccCCCCCceeeccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~ 421 (854)
+.|+|++|++++..|..|.++++|++|+|++|++++.++ .+++|++|++|+|++|++++ .+|..|+++++|+.|++++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~ 158 (570)
T 2z63_A 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTT
T ss_pred CEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcC
Confidence 999999999997777899999999999999999998877 48999999999999999986 4799999999999999999
Q ss_pred ccccccccccc--cccc----ccccccCCccc
Q 003046 422 NMLSGTVPSSL--LSKN----VVLNYAGNINL 447 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l----~~l~~~~n~~~ 447 (854)
|++++..|..+ +.++ ..|++++|...
T Consensus 159 n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~ 190 (570)
T 2z63_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (570)
T ss_dssp SCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred CccceecHHHccchhccchhhhhcccCCCCce
Confidence 99995445444 4444 56777777543
No 350
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.37 E-value=6.2e-13 Score=154.69 Aligned_cols=145 Identities=13% Similarity=0.017 Sum_probs=108.0
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
+.|+++.|.++.+|+.+. +.++.|+++.|.+....+..+ ..+++|+.|+
T Consensus 3 ~~l~ls~n~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~-----------------------------~~l~~L~~L~ 51 (520)
T 2z7x_B 3 FLVDRSKNGLIHVPKDLS--QKTTILNISQNYISELWTSDI-----------------------------LSLSKLRILI 51 (520)
T ss_dssp CEEECTTSCCSSCCCSCC--TTCSEEECCSSCCCCCCHHHH-----------------------------TTCTTCCEEE
T ss_pred ceEecCCCCccccccccc--ccccEEECCCCcccccChhhc-----------------------------cccccccEEe
Confidence 457888899999888776 788889998888764222222 2345788888
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCC-CCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..|..|++|++|++|+|++|+|+++++. .+++|++|+|++|+|++ .+|..|+++++|+.|+|++|+|++
T Consensus 52 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 52 ISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred cCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch
Confidence 888888877788888888888888888888865555 78888888888888886 467888888888888888888874
Q ss_pred cccccccccc--ccccccCCcc
Q 003046 427 TVPSSLLSKN--VVLNYAGNIN 446 (854)
Q Consensus 427 ~ip~~l~~~l--~~l~~~~n~~ 446 (854)
..-.-+.++ +.|++++|..
T Consensus 130 -~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 130 -SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp -GGGGGGTTSCEEEEEEEECTT
T ss_pred -hhccccccceeeEEEeecccc
Confidence 222235555 7777777654
No 351
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=2.3e-12 Score=127.35 Aligned_cols=90 Identities=23% Similarity=0.321 Sum_probs=81.6
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 4799999999999988899999999999999999999998887 689999999999999999666666999999999999
Q ss_pred cccccccccccc
Q 003046 420 QNNMLSGTVPSS 431 (854)
Q Consensus 420 ~~N~l~g~ip~~ 431 (854)
++|++. ..|..
T Consensus 113 ~~N~~~-c~~~~ 123 (174)
T 2r9u_A 113 YNNPWD-CECRD 123 (174)
T ss_dssp CSSCBC-TTBGG
T ss_pred CCCCcc-ccccc
Confidence 999999 55543
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.36 E-value=1.4e-13 Score=166.41 Aligned_cols=132 Identities=24% Similarity=0.193 Sum_probs=77.9
Q ss_pred eeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEe
Q 003046 269 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 348 (854)
Q Consensus 269 ~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~L 348 (854)
.+++..|.+...|..+..+..|+.|+|+.|.+... .+ ....+++|+.|+|
T Consensus 205 ~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l-------------------~~-----------~~~~l~~L~~L~L 254 (727)
T 4b8c_D 205 EDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNI-------------------SA-----------NIFKYDFLTRLYL 254 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCSCC-------------------CG-----------GGGGCCSCSCCBC
T ss_pred CccccccceecChhhhccCCCCcEEECCCCCCCCC-------------------Ch-----------hhcCCCCCCEEEe
Confidence 33444555554445566666666677666655420 00 0012456777777
Q ss_pred cCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccccccc
Q 003046 349 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTV 428 (854)
Q Consensus 349 s~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~i 428 (854)
++|+|+ .+|..|++|++|+.|+|++|+|+.++..|++|++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|+|.+
T Consensus 255 s~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 332 (727)
T 4b8c_D 255 NGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332 (727)
T ss_dssp TTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHH
T ss_pred eCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCC
Confidence 777777 7777777777777777777777755555777777777777777776 66777777777777777777777666
Q ss_pred cccc
Q 003046 429 PSSL 432 (854)
Q Consensus 429 p~~l 432 (854)
|..+
T Consensus 333 p~~~ 336 (727)
T 4b8c_D 333 LKIL 336 (727)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 6655
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.36 E-value=6.8e-13 Score=156.68 Aligned_cols=158 Identities=20% Similarity=0.231 Sum_probs=123.9
Q ss_pred cccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
.++.|+.|+|+.|.++.+|| +..+..|+.|+|+.|.+.. +..+..+..+..+.. .-|. ...+ .....+++
T Consensus 63 ~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~--l~~l~~l~~L~~L~L---s~N~---l~~l-~~l~~l~~ 132 (605)
T 1m9s_A 63 YLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKD--LSSLKDLKKLKSLSL---EHNG---ISDI-NGLVHLPQ 132 (605)
T ss_dssp GCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC--CTTSTTCTTCCEEEC---TTSC---CCCC-GGGGGCTT
T ss_pred cCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCC--ChhhccCCCCCEEEe---cCCC---CCCC-ccccCCCc
Confidence 35678899999999999988 8899999999999998765 234444444444422 1121 1111 12345789
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
|+.|+|++|+|++. ..|..|++|+.|+|++|+|++.+| +..|++|+.|+|++|+|++ +| .|..|++|+.|+|++|
T Consensus 133 L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N 207 (605)
T 1m9s_A 133 LESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQ 207 (605)
T ss_dssp CSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSE
T ss_pred cCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCC
Confidence 99999999999954 679999999999999999999888 9999999999999999995 54 6999999999999999
Q ss_pred cccccccccccccc
Q 003046 423 MLSGTVPSSLLSKN 436 (854)
Q Consensus 423 ~l~g~ip~~l~~~l 436 (854)
+|+ ..|...+..+
T Consensus 208 ~l~-~~p~~~~~~l 220 (605)
T 1m9s_A 208 ECL-NKPINHQSNL 220 (605)
T ss_dssp EEE-CCCCCCCSSC
T ss_pred cCc-CCcccccccE
Confidence 999 5665554444
No 354
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.35 E-value=9.7e-13 Score=128.91 Aligned_cols=105 Identities=22% Similarity=0.256 Sum_probs=89.9
Q ss_pred CCCeeEEEecCCCCc-ccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~-g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
+++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++.+|..+.++++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 468999999999998 78898889999999999999999887 7788899999999999999977888888899999999
Q ss_pred ccccccccccc--ccc--ccccccccccCCcc
Q 003046 419 VQNNMLSGTVP--SSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 419 l~~N~l~g~ip--~~l--~~~l~~l~~~~n~~ 446 (854)
|++|+|+ .+| ..+ +++++.|++++|+.
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGG
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcC
Confidence 9999998 554 344 66788889988854
No 355
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.35 E-value=1.3e-13 Score=150.13 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=120.7
Q ss_pred ccceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
++.|+.|+|+.|.++.++|. +..+..|+.|+++.|.+....+. .+ ...+++
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------~~-------------------~~~l~~ 170 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA---------EL-------------------AASSDT 170 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG---------GG-------------------GGGTTT
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH---------HH-------------------hhccCc
Confidence 45678888888888888774 77788888888888876541000 00 013568
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
|+.|+|++|+|++ +|. ...+++|+.|+|++|+|++.++.+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 171 L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N 247 (317)
T 3o53_A 171 LEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGN 247 (317)
T ss_dssp CCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTC
T ss_pred CCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCC
Confidence 9999999999995 443 44699999999999999999889999999999999999999 68999999999999999999
Q ss_pred ccc-ccccccc--ccccccccccCCccc
Q 003046 423 MLS-GTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 423 ~l~-g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
+++ +.+|..+ +..++.+++.++..+
T Consensus 248 ~~~~~~~~~~~~~~~~L~~l~l~~~~~l 275 (317)
T 3o53_A 248 GFHCGTLRDFFSKNQRVQTVAKQTVKKL 275 (317)
T ss_dssp CCBHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CccCcCHHHHHhccccceEEECCCchhc
Confidence 998 6666655 555677777755443
No 356
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.35 E-value=7.5e-13 Score=126.93 Aligned_cols=105 Identities=19% Similarity=0.226 Sum_probs=92.3
Q ss_pred CCCeeEEEecCCCCc-ccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~-g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++.+|..+..+++|+.|+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 358999999999998 88999999999999999999999988 7799999999999999999977888888899999999
Q ss_pred ccccccccccc--ccc--ccccccccccCCcc
Q 003046 419 VQNNMLSGTVP--SSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 419 l~~N~l~g~ip--~~l--~~~l~~l~~~~n~~ 446 (854)
|++|+|++ +| ..+ +++++.|++++|+.
T Consensus 95 ls~N~i~~-~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 95 LSGNKIKD-LSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp CTTSCCCS-HHHHGGGGGCTTCCEEECTTCGG
T ss_pred CCCCcCCC-hHHHHHHhhCCCCCEEeCcCCcc
Confidence 99999994 43 444 67789999999854
No 357
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.35 E-value=1.6e-13 Score=160.61 Aligned_cols=174 Identities=17% Similarity=0.108 Sum_probs=85.8
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~~~ 342 (854)
+.++.|+|+.|.++.++|. +..+..|+.|+++.|.+....+.++..+..++.+... -| ...++.. ...++++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls---~n---~l~~~~~~~~~~l~~ 99 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS---DN---HLSSLSSSWFGPLSS 99 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT---TS---CCCSCCHHHHTTCTT
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC---CC---ccCccCHHHhccCCC
Confidence 3567777777777777654 7777777777777777654222222222222222110 00 0011110 0123345
Q ss_pred eeEEEecCCCCcc-cCCcccccCccCcEEeccCCcc-cccCC-CCCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 343 ITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSL-TGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 343 L~~L~Ls~n~l~g-~lp~~~~~l~~L~~L~Ls~N~l-~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
|+.|+|++|++++ .+|..++++++|++|+|++|++ ...++ .|.++++|+.|+|++|++++.+|..++.+++|+.|++
T Consensus 100 L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 179 (549)
T 2z81_A 100 LKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179 (549)
T ss_dssp CCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred CcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEec
Confidence 5555555555553 2344455555555555555552 22222 2555555555555555555555555555555555555
Q ss_pred ccccccccccccc---ccccccccccCCc
Q 003046 420 QNNMLSGTVPSSL---LSKNVVLNYAGNI 445 (854)
Q Consensus 420 ~~N~l~g~ip~~l---~~~l~~l~~~~n~ 445 (854)
++|.+. .+|..+ +.+++.|++++|.
T Consensus 180 ~~n~~~-~~~~~~~~~l~~L~~L~L~~n~ 207 (549)
T 2z81_A 180 HLSESA-FLLEIFADILSSVRYLELRDTN 207 (549)
T ss_dssp ECSBST-THHHHHHHSTTTBSEEEEESCB
T ss_pred ccCccc-ccchhhHhhcccccEEEccCCc
Confidence 555554 444433 4455666666654
No 358
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.35 E-value=1.1e-12 Score=132.29 Aligned_cols=130 Identities=14% Similarity=0.222 Sum_probs=107.1
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.++ .+..+..|+.|+++.|.+... . +. ....+++|
T Consensus 65 l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~------------------~-~~----------~l~~l~~L 114 (197)
T 4ezg_A 65 AHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSD------------------K-IP----------NLSGLTSL 114 (197)
T ss_dssp CTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGG------------------G-SC----------CCTTCTTC
T ss_pred CCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcc------------------c-Ch----------hhcCCCCC
Confidence 457899999999887764 788899999999999987641 0 00 11346799
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCc-ccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNS-LTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 422 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 422 (854)
+.|+|++|++++..|..|.++++|++|+|++|+ ++. +|.+.++++|+.|+|++|+|++ ++ .+..+++|+.|++++|
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 999999999998899999999999999999998 554 4579999999999999999995 55 7999999999999999
Q ss_pred cccc
Q 003046 423 MLSG 426 (854)
Q Consensus 423 ~l~g 426 (854)
+|.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
No 359
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.35 E-value=1.2e-12 Score=161.52 Aligned_cols=105 Identities=22% Similarity=0.260 Sum_probs=85.7
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++|+.|+|++|++.+..|..|..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 5788888888888888888888888888888888888887775 888888888888888888777888888888888888
Q ss_pred cccccccccccc-c--ccccccccccCCcc
Q 003046 420 QNNMLSGTVPSS-L--LSKNVVLNYAGNIN 446 (854)
Q Consensus 420 ~~N~l~g~ip~~-l--~~~l~~l~~~~n~~ 446 (854)
++|+|+ .++.. + +.+++.|++++|..
T Consensus 346 ~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l 374 (844)
T 3j0a_A 346 QKNHIA-IIQDQTFKFLEKLQTLDLRDNAL 374 (844)
T ss_dssp CSCCCC-CCCSSCSCSCCCCCEEEEETCCS
T ss_pred CCCCCC-ccChhhhcCCCCCCEEECCCCCC
Confidence 888888 44443 3 56677888877754
No 360
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.34 E-value=1.3e-12 Score=143.57 Aligned_cols=169 Identities=17% Similarity=0.193 Sum_probs=120.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|++..|.++.+++ +..+..|+.|+++.|.+..... +..+..+..... .-|. ...+.. ...+++|
T Consensus 154 l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l---~~n~---l~~~~~-~~~~~~L 223 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTA---YVNQ---ITDITP-VANMTRL 223 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEEC---CSSC---CCCCGG-GGGCTTC
T ss_pred CCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCccccccc--ccCCCccceeec---ccCC---CCCCch-hhcCCcC
Confidence 5567788888888888777 7778888888888777654221 333333333211 1111 111111 2346789
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|++++ +|. +..+++|+.|+|++|++++. +.+..+++|+.|+|++|+|++ + +.+..+++|+.|+|++|+
T Consensus 224 ~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 224 NSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp CEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSC
T ss_pred CEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCc
Confidence 999999999984 554 88889999999999998875 568888999999999999885 4 458888999999999999
Q ss_pred ccccccccc--ccccccccccCCccc
Q 003046 424 LSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 424 l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
+++..|..+ +++++.|++++|+..
T Consensus 299 l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 299 LGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp CCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred CCCcChhHhhccccCCEEEccCCccc
Confidence 986666655 677888889888654
No 361
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.34 E-value=7.2e-13 Score=160.20 Aligned_cols=159 Identities=23% Similarity=0.270 Sum_probs=98.6
Q ss_pred cccccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCC
Q 003046 261 NLSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 340 (854)
Q Consensus 261 ~~~l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~ 340 (854)
..+.+.++.|.|..|.+...|.. .++.+.|+.|.++...+. |.. .....-....+
T Consensus 169 ~~s~~~~~~l~L~~n~~~~~~~~-----~l~~l~Ls~~~i~~~~~~------------------~n~--~~~~~~~~~~l 223 (727)
T 4b8c_D 169 AVSTPLTPKIELFANGKDEANQA-----LLQHKKLSQYSIDEDDDI------------------ENR--MVMPKDSKYDD 223 (727)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred eecCCccceEEeeCCCCCcchhh-----HhhcCccCcccccCcccc------------------ccc--eecChhhhccC
Confidence 34445677888888888876544 345566666665542110 000 00001123456
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecc
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 420 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 420 (854)
++|+.|+|++|+|. .+|..+++|++|+.|+|++|+|+.+++.|++|++|+.|+|++|+|+ .+|..|++|++|+.|+|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 78999999999999 8999999999999999999999976667999999999999999999 889999999999999999
Q ss_pred cccccccccccc--ccccccccccCCccc
Q 003046 421 NNMLSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 421 ~N~l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
+|.|+ .+|..+ +.+|..|++++|+..
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 99998 999987 678899999999754
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.34 E-value=1.4e-12 Score=138.01 Aligned_cols=133 Identities=15% Similarity=0.191 Sum_probs=113.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.+|| +..+..|+.|+++.|.+.. .++. .. ++|
T Consensus 62 l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-------------------l~~~------------~~-~~L 108 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-------------------LNGI------------PS-ACL 108 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-------------------CTTC------------CC-SSC
T ss_pred CCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-------------------cCcc------------cc-Ccc
Confidence 5688999999999999999 9999999999999998763 1111 01 589
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++ +| .+.++++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+
T Consensus 109 ~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 109 SRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred cEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 999999999995 55 699999999999999999987 4789999999999999999965 779999999999999999
Q ss_pred cccccccccccc
Q 003046 424 LSGTVPSSLLSK 435 (854)
Q Consensus 424 l~g~ip~~l~~~ 435 (854)
++ ..|......
T Consensus 184 ~~-~~~~~~~~~ 194 (263)
T 1xeu_A 184 CV-NEPVKYQPE 194 (263)
T ss_dssp EE-CCCEECCSE
T ss_pred cc-CCccccccc
Confidence 99 556655443
No 363
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.33 E-value=1.5e-12 Score=149.38 Aligned_cols=105 Identities=24% Similarity=0.285 Sum_probs=69.4
Q ss_pred CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
.+++|+.|+|++|++++..| +..+++|+.|+|++|++++.+| +..+++|+.|+|++|++++. ..+.++++|+.|+
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 359 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLS 359 (466)
T ss_dssp TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEE
T ss_pred CCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEe
Confidence 45566777777777764332 6667777777777777776655 66677777777777777743 3567777777777
Q ss_pred ccccccccccccccccccccccccCCcccc
Q 003046 419 VQNNMLSGTVPSSLLSKNVVLNYAGNINLH 448 (854)
Q Consensus 419 l~~N~l~g~ip~~l~~~l~~l~~~~n~~~~ 448 (854)
|++|++++..|..-+.+++.|++++|+...
T Consensus 360 l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 360 AGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred CCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 777777766664446666777777776543
No 364
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.33 E-value=3.3e-12 Score=149.26 Aligned_cols=135 Identities=18% Similarity=0.149 Sum_probs=80.9
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
+++|+.|+|+.|.++.+|+ +.. .|+.|++++|.+..... .+++|
T Consensus 99 l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~lp~---------------------------------~l~~L 142 (571)
T 3cvr_A 99 PASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTMLPE---------------------------------LPALL 142 (571)
T ss_dssp CTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSCCCC---------------------------------CCTTC
T ss_pred cCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCCCCC---------------------------------cCccc
Confidence 3567788888888888888 555 78888888887653100 12456
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCC-------ce
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL-------RE 416 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------~~ 416 (854)
+.|+|++|+|++ +|. .+++|+.|+|++|+|+++++ |. ++|+.|+|++|+|+ .+|. |.. +| +.
T Consensus 143 ~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~ 211 (571)
T 3cvr_A 143 EYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIF 211 (571)
T ss_dssp CEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEE
T ss_pred cEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceE
Confidence 666666666663 554 45566666666666665433 43 56666666666666 4555 443 45 66
Q ss_pred eecccccccccccccc--ccccccccccCCcc
Q 003046 417 LYVQNNMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 417 L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~~ 446 (854)
|+|++|+|+ .+|..+ ++++..|++++|+.
T Consensus 212 L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 212 FRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp EECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred EecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 666666666 566555 44555566666654
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.33 E-value=2e-12 Score=151.69 Aligned_cols=100 Identities=24% Similarity=0.250 Sum_probs=87.5
Q ss_pred CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCC-CccccCCCCCcee
Q 003046 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL-PSSLMNLPNLREL 417 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L 417 (854)
.+++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|+++ |.+++|++|+.|+|++|+|++.. |..|+.|++|+.|
T Consensus 461 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCC-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 4568999999999999 8999999999999999999999985 58999999999999999999776 9999999999999
Q ss_pred ecccccccccccccc-----cccccccc
Q 003046 418 YVQNNMLSGTVPSSL-----LSKNVVLN 440 (854)
Q Consensus 418 ~l~~N~l~g~ip~~l-----~~~l~~l~ 440 (854)
+|++|+|++..|... +++++.|+
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccC
Confidence 999999995444221 45555553
No 366
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.32 E-value=1.7e-12 Score=128.44 Aligned_cols=130 Identities=15% Similarity=0.074 Sum_probs=70.1
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
...++.|+|+.|.++.+|........|+.|+++.|.+... . ....+++|
T Consensus 18 ~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~-----------~--------------------~l~~l~~L 66 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL-----------D--------------------GFPLLRRL 66 (176)
T ss_dssp TTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE-----------C--------------------CCCCCSSC
T ss_pred cCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc-----------c--------------------ccccCCCC
Confidence 4456677777777776643222222566666666554420 0 01223456
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCC--CCCCCCCccEEEcCCcccCCCCCcc----ccCCCCCcee
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSS----LMNLPNLREL 417 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~~p~~----~~~l~~L~~L 417 (854)
+.|+|++|+|++..|..+..+++|+.|+|++|+|+..++ .+..+++|+.|+|++|.|+ .+|.. +..+++|+.|
T Consensus 67 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 67 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred CEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 666666666663322333556666666666666655444 3555666666666666665 44443 5556666666
Q ss_pred eccccccc
Q 003046 418 YVQNNMLS 425 (854)
Q Consensus 418 ~l~~N~l~ 425 (854)
++++|.+.
T Consensus 146 d~~~n~~~ 153 (176)
T 1a9n_A 146 DFQKVKLK 153 (176)
T ss_dssp TTEECCHH
T ss_pred CCCcCCHH
Confidence 66666554
No 367
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.31 E-value=4.1e-12 Score=124.94 Aligned_cols=89 Identities=27% Similarity=0.328 Sum_probs=81.9
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
++|+.|+|++|+|++..|..|.+|++|++|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 5799999999999988899999999999999999999999887 789999999999999999776778999999999999
Q ss_pred cccccccccc
Q 003046 420 QNNMLSGTVP 429 (854)
Q Consensus 420 ~~N~l~g~ip 429 (854)
++|++++..+
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 9999995443
No 368
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.30 E-value=3e-12 Score=146.95 Aligned_cols=168 Identities=22% Similarity=0.233 Sum_probs=103.4
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.+++ +..+..|+.|+++.|.+..... +..+..+..+.. .-|. ...+. ....+++|
T Consensus 176 l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l---~~n~---l~~~~-~l~~l~~L 245 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSL---NGNQ---LKDIG-TLASLTNL 245 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG-GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEEC---CSSC---CCCCG-GGGGCTTC
T ss_pred CCCCCEEECcCCcCCCChh-hccCCCCCEEEecCCccccccc--ccccCCCCEEEC---CCCC---cccch-hhhcCCCC
Confidence 4566777777777777643 6667777777777776554221 223333333311 1111 11111 12235677
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|++++..| +..+++|+.|+|++|++++.++ +..+++|+.|+|++|++++..| +..+++|+.|+|++|+
T Consensus 246 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~ 320 (466)
T 1o6v_A 246 TDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 320 (466)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSC
T ss_pred CEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCc
Confidence 777777777775433 7777777777777777777655 6777777777777777775333 6777777777777777
Q ss_pred cccccccccccccccccccCCcc
Q 003046 424 LSGTVPSSLLSKNVVLNYAGNIN 446 (854)
Q Consensus 424 l~g~ip~~l~~~l~~l~~~~n~~ 446 (854)
+++..|..-+.+++.|++++|..
T Consensus 321 l~~~~~~~~l~~L~~L~l~~n~l 343 (466)
T 1o6v_A 321 ISDISPVSSLTKLQRLFFYNNKV 343 (466)
T ss_dssp CSCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCchhhccCccCCEeECCCCcc
Confidence 77666644566777777777643
No 369
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.30 E-value=5.3e-12 Score=144.40 Aligned_cols=160 Identities=18% Similarity=0.173 Sum_probs=97.2
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.+| +..+..|+.|+++.|.+.... +..+..+..+.. .-|.. ...+ ....+++|
T Consensus 105 l~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~---l~~l~~L~~L~l---~~n~~--~~~~--~~~~l~~L 172 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTEID---VSHNTQLTELDC---HLNKK--ITKL--DVTPQTQL 172 (457)
T ss_dssp CTTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSCCC---CTTCTTCCEEEC---TTCSC--CCCC--CCTTCTTC
T ss_pred CCcCCEEECCCCcCCeec--CCCCCcCCEEECCCCccceec---cccCCcCCEEEC---CCCCc--cccc--ccccCCcC
Confidence 455666667777766664 666666777777666655421 222222222211 11100 0001 23356677
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++ +| ++.+++|+.|+|++|+|++. .+..+++|+.|+|++|+|++ +| ++.+++|+.|+|++|+
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSC
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCc
Confidence 777777777774 55 77777777777777777775 37777777788888887775 55 7777777788888887
Q ss_pred cccccccccccccccccccCC
Q 003046 424 LSGTVPSSLLSKNVVLNYAGN 444 (854)
Q Consensus 424 l~g~ip~~l~~~l~~l~~~~n 444 (854)
|+ .+|...+.+++.|++.+|
T Consensus 245 l~-~~~~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 245 LT-ELDVSTLSKLTTLHCIQT 264 (457)
T ss_dssp CS-CCCCTTCTTCCEEECTTC
T ss_pred CC-CcCHHHCCCCCEEeccCC
Confidence 77 355545555555544443
No 370
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=2.7e-12 Score=141.27 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=90.3
Q ss_pred EEEecCC-CCcccCCcccccCccCcEEeccC-CcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 345 VIHLSSK-NLTGNIPSDLTKLSSLVELWLDG-NSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 345 ~L~Ls~n-~l~g~lp~~~~~l~~L~~L~Ls~-N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
.++++++ +|+ .+|. |..+++|+.|+|++ |+|+++++. |.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 888 6888 99999999999996 999998875 89999999999999999988888999999999999999
Q ss_pred cccccccccccccc--cccccccCCcccccCC
Q 003046 422 NMLSGTVPSSLLSK--NVVLNYAGNINLHEGG 451 (854)
Q Consensus 422 N~l~g~ip~~l~~~--l~~l~~~~n~~~~~~~ 451 (854)
|+|+ .+|..++.. |+.|++.+|+..|.+.
T Consensus 90 N~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALE-SLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred Cccc-eeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999 777766443 7889999999988754
No 371
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.30 E-value=2e-12 Score=152.03 Aligned_cols=145 Identities=14% Similarity=0.019 Sum_probs=96.2
Q ss_pred eeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEE
Q 003046 268 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 347 (854)
Q Consensus 268 ~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 347 (854)
+.+++++|.++.+|+.+. ..++.|+++.|.+...... ...++++|+.|+
T Consensus 34 ~~l~ls~~~L~~ip~~~~--~~L~~L~Ls~N~i~~~~~~-----------------------------~~~~l~~L~~L~ 82 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKDLP--PRTKALSLSQNSISELRMP-----------------------------DISFLSELRVLR 82 (562)
T ss_dssp CEEECTTSCCCSCCTTSC--TTCCEEECCSSCCCCCCGG-----------------------------GTTTCTTCCEEE
T ss_pred cEEEcCCCCCccCCCCCC--CCcCEEECCCCCccccChh-----------------------------hhccCCCccEEE
Confidence 567777777887777654 6777777777776531000 113456777777
Q ss_pred ecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCC-CCCccccCCCCCceeecccccccc
Q 003046 348 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNNMLSG 426 (854)
Q Consensus 348 Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g 426 (854)
|++|+|++..|..|.++++|++|+|++|+|+.+++. .+++|++|+|++|+|++ .+|..|+++++|+.|+|++|+|++
T Consensus 83 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 83 LSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 777777766677777777777777777777765554 67777777777777775 345677777777777777777773
Q ss_pred cccccccccc--ccccccCCcc
Q 003046 427 TVPSSLLSKN--VVLNYAGNIN 446 (854)
Q Consensus 427 ~ip~~l~~~l--~~l~~~~n~~ 446 (854)
..-.-+.++ +.|++++|..
T Consensus 161 -~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 161 -LDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp -TTTGGGTTSCEEEEEEEESSC
T ss_pred -CchhhhhhceeeEEEeecccc
Confidence 222223444 6666666644
No 372
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.30 E-value=1.8e-13 Score=153.00 Aligned_cols=181 Identities=14% Similarity=0.135 Sum_probs=136.0
Q ss_pred cccceeeeecccCCCCC-----CCcccchhhhceeccCCCCCccHHHHHHHHhh-------------cCCCCccCCCCCC
Q 003046 263 SLPFVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISL-------------YSSADWAQEGGDP 324 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~-----lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l-------------~~~~~~~~~~~dp 324 (854)
.++.|+.|+|+.|.++. +|..+..+..|+.|+++.|.+....+..+... ..+..+.. .-
T Consensus 92 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L---~~ 168 (386)
T 2ca6_A 92 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIIC---GR 168 (386)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEC---CS
T ss_pred hCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEEC---CC
Confidence 35788999999999998 77789999999999999999986555554443 45555422 11
Q ss_pred CCCCCCCeeE---eCCCCCCCeeEEEecCCCCc--c---cCCcccccCccCcEEeccCCccc----ccCC-CCCCCCCcc
Q 003046 325 CLPVPWSWLQ---CNSDPQPSITVIHLSSKNLT--G---NIPSDLTKLSSLVELWLDGNSLT----GPIP-DFSGCPDLR 391 (854)
Q Consensus 325 c~~~~~~~~~---c~~~~~~~L~~L~Ls~n~l~--g---~lp~~~~~l~~L~~L~Ls~N~l~----~~~~-~~~~l~~L~ 391 (854)
|. ....++. -....+++|+.|+|++|+|+ | .+|..+.++++|+.|+|++|+|+ +.+| .+..+++|+
T Consensus 169 n~-l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 169 NR-LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp SC-CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred CC-CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 21 0001111 01123568999999999998 3 45558889999999999999995 4444 488899999
Q ss_pred EEEcCCcccCCC----CCccc--cCCCCCceeecccccccc----cccccc---ccccccccccCCccc
Q 003046 392 IIHLEDNQLTGP----LPSSL--MNLPNLRELYVQNNMLSG----TVPSSL---LSKNVVLNYAGNINL 447 (854)
Q Consensus 392 ~L~Ls~N~l~g~----~p~~~--~~l~~L~~L~l~~N~l~g----~ip~~l---~~~l~~l~~~~n~~~ 447 (854)
.|+|++|+|++. +|..+ +.+++|+.|+|++|+|++ .+|..+ +++++.|++++|+..
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 999999999865 56777 448999999999999996 488877 678899999998654
No 373
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.29 E-value=4.4e-12 Score=148.28 Aligned_cols=154 Identities=21% Similarity=0.152 Sum_probs=104.5
Q ss_pred ceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeE
Q 003046 266 FVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITV 345 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~ 345 (854)
.++.|+|+.|.++.+|+.+. ..|+.|++++|.+..+. ..+..+..+... + | ...+++. .. .+|+.
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls-~--N---~l~~ip~-l~--~~L~~ 124 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALISLP----ELPASLEYLDAC-D--N---RLSTLPE-LP--ASLKH 124 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCSCCC----CCCTTCCEEECC-S--S---CCSCCCC-CC--TTCCE
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCcccc----cccCCCCEEEcc-C--C---CCCCcch-hh--cCCCE
Confidence 45666777777777766542 56777777776665321 111122222110 0 0 0111111 11 17999
Q ss_pred EEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccc
Q 003046 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 346 L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
|+|++|+|++ +|. .+++|+.|+|++|+|+++++ .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+
T Consensus 125 L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 125 LDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp EECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred EECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 9999999995 777 68999999999999998554 67899999999999995 777 66 89999999999999
Q ss_pred ccccccccccc-------ccccccCCccc
Q 003046 426 GTVPSSLLSKN-------VVLNYAGNINL 447 (854)
Q Consensus 426 g~ip~~l~~~l-------~~l~~~~n~~~ 447 (854)
.+|. +..++ ..|++++|...
T Consensus 194 -~lp~-~~~~L~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 194 -SLPA-VPVRNHHSEETEIFFRCRENRIT 220 (571)
T ss_dssp -SCCC-CC--------CCEEEECCSSCCC
T ss_pred -chhh-HHHhhhcccccceEEecCCCcce
Confidence 8888 76677 88999988654
No 374
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.28 E-value=6.6e-12 Score=143.65 Aligned_cols=162 Identities=17% Similarity=0.080 Sum_probs=94.3
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCe
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 343 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L 343 (854)
++.|+.|+|+.|.++.+| .+..+..|+.|+++.|.+.... +..+..++.+.. .-|. ..++ ....+++|
T Consensus 41 l~~L~~L~Ls~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~L---s~N~---l~~~--~~~~l~~L 108 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDMT-GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLAC---DSNK---LTNL--DVTPLTKL 108 (457)
T ss_dssp HTTCCEEECCSSCCCCCT-TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEEC---CSSC---CSCC--CCTTCTTC
T ss_pred cCCCCEEEccCCCcccCh-hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEEC---cCCC---Ccee--ecCCCCcC
Confidence 556677777777777774 5777777777777777766531 233333333211 1110 1111 13455667
Q ss_pred eEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccc
Q 003046 344 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 423 (854)
Q Consensus 344 ~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 423 (854)
+.|+|++|+|++ +| ++++++|+.|+|++|+|++. .++.+++|+.|+|++|+..+.+ .++.+++|+.|+|++|+
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNK 181 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSC
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCc
Confidence 777777777774 44 66777777777777777664 2566666666666666544444 35566666666666666
Q ss_pred cccccccccccccccccccCCc
Q 003046 424 LSGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 424 l~g~ip~~l~~~l~~l~~~~n~ 445 (854)
|+ .+|-.-+.+++.|++++|.
T Consensus 182 l~-~l~l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 182 IT-ELDVSQNKLLNRLNCDTNN 202 (457)
T ss_dssp CC-CCCCTTCTTCCEEECCSSC
T ss_pred cc-eeccccCCCCCEEECcCCc
Confidence 66 3553335555566665553
No 375
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.24 E-value=4.2e-11 Score=141.61 Aligned_cols=93 Identities=32% Similarity=0.380 Sum_probs=56.9
Q ss_pred CeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 342 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
+|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++++ ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~ 270 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYR 270 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCS
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCC
Confidence 3444444444444 33321 256677777777776644 34566777777777777 4555 456677777777
Q ss_pred ccccccccccc--ccccccccccCCcc
Q 003046 422 NMLSGTVPSSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 422 N~l~g~ip~~l--~~~l~~l~~~~n~~ 446 (854)
|+|+ .+|..+ +++++.|++++|+.
T Consensus 271 N~L~-~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 271 NQLT-RLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp SCCC-SCCGGGGGSCTTCEEECCSCCC
T ss_pred CCCC-cCCHHHhhccccCEEEecCCCC
Confidence 7777 677665 55666777777754
No 376
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.24 E-value=1.1e-11 Score=122.49 Aligned_cols=104 Identities=18% Similarity=0.150 Sum_probs=87.3
Q ss_pred CCCeeEEEecCCCCcccCCcccccCc-cCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
+++|+.|+|++|+|+ .+|. +..+. +|+.|+|++|+|++. +.+..+++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 458999999999999 5665 66655 999999999999987 7799999999999999999955445568999999999
Q ss_pred cccccccccccc--cc--ccccccccccCCccc
Q 003046 419 VQNNMLSGTVPS--SL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 419 l~~N~l~g~ip~--~l--~~~l~~l~~~~n~~~ 447 (854)
|++|+|+ .+|. .+ +++++.|++++|+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 9999997 7886 44 667889999999764
No 377
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.24 E-value=7.3e-11 Score=139.58 Aligned_cols=74 Identities=32% Similarity=0.371 Sum_probs=48.5
Q ss_pred ccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccccccccccccccccccccCC
Q 003046 365 SSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGN 444 (854)
Q Consensus 365 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n 444 (854)
++|+.|+|++|+|+.+++ .+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+.++..|++++|
T Consensus 201 ~~L~~L~L~~N~l~~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~-~~~~L~~L~Ls~N 271 (622)
T 3g06_A 201 SELYKLWAYNNRLTSLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM-LPSGLLSLSVYRN 271 (622)
T ss_dssp TTCCEEECCSSCCSSCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC-CCTTCCEEECCSS
T ss_pred chhhEEECcCCcccccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc-ccccCcEEeCCCC
Confidence 344444444444443322 13677888888888884 66 45577888888888888 7777 6677888888887
Q ss_pred ccc
Q 003046 445 INL 447 (854)
Q Consensus 445 ~~~ 447 (854)
...
T Consensus 272 ~L~ 274 (622)
T 3g06_A 272 QLT 274 (622)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 378
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.22 E-value=7.2e-13 Score=144.87 Aligned_cols=176 Identities=15% Similarity=0.157 Sum_probs=100.6
Q ss_pred ccceeeeecccCCCCC--CCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 341 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~--lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~ 341 (854)
++.|+.|+|+.|.++. +|..+..+..|+.|+++.|.+....+..+.++..++.+. ..-|......++......++
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~---L~~~~~l~~~~l~~~~~~~~ 168 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN---LSGCSGFSEFALQTLLSSCS 168 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE---CTTCBSCCHHHHHHHHHHCT
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE---CCCCCCCCHHHHHHHHhcCC
Confidence 4566777777776654 556677777777777777776666666666555555442 22221111001111112345
Q ss_pred CeeEEEecCC-CCccc-CCcccccCc-cCcEEeccCC--ccc-ccCC-CCCCCCCccEEEcCCcc-cCCCCCccccCCCC
Q 003046 342 SITVIHLSSK-NLTGN-IPSDLTKLS-SLVELWLDGN--SLT-GPIP-DFSGCPDLRIIHLEDNQ-LTGPLPSSLMNLPN 413 (854)
Q Consensus 342 ~L~~L~Ls~n-~l~g~-lp~~~~~l~-~L~~L~Ls~N--~l~-~~~~-~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 413 (854)
+|+.|+|++| ++++. ++..+..++ +|+.|+|++| .++ +.++ .+.++++|+.|+|++|. +++..+..+.++++
T Consensus 169 ~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~ 248 (336)
T 2ast_B 169 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 248 (336)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred CCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCC
Confidence 6777777777 66643 566666676 7777777777 343 2223 34556777777777776 55556666667777
Q ss_pred Cceeeccccccccccccc---c--ccccccccccCC
Q 003046 414 LRELYVQNNMLSGTVPSS---L--LSKNVVLNYAGN 444 (854)
Q Consensus 414 L~~L~l~~N~l~g~ip~~---l--~~~l~~l~~~~n 444 (854)
|+.|+|++|. +..|.. + +++++.|++.+|
T Consensus 249 L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 249 LQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 7777777764 122221 2 455666666665
No 379
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.20 E-value=3.7e-12 Score=140.48 Aligned_cols=176 Identities=15% Similarity=0.132 Sum_probs=112.5
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccH-HHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG-VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 341 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~-~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~~ 341 (854)
+.++.|+|+.|.++.+|+. +.++..|+.|+++.|++.. +...++..+..+..+.....+ ....+.- ....++
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N-----~l~~l~~~~f~~l~ 104 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN-----NLLYINPEAFQNLP 104 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET-----TCCEECTTSBCCCT
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC-----cccccCchhhhhcc
Confidence 3568889999999999986 8999999999999887632 222222222222111000000 0111110 123455
Q ss_pred CeeEEEecCCCCcccCCc-------------------------ccccC-ccCcEEeccCCcccccCCCCCCCCCccEEEc
Q 003046 342 SITVIHLSSKNLTGNIPS-------------------------DLTKL-SSLVELWLDGNSLTGPIPDFSGCPDLRIIHL 395 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~lp~-------------------------~~~~l-~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L 395 (854)
+|+.|+|++|+|++..+. .|..+ ..|+.|+|++|+|+.+++......+|+.|++
T Consensus 105 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l 184 (350)
T 4ay9_X 105 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNL 184 (350)
T ss_dssp TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEEC
T ss_pred ccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhh
Confidence 666666666666533222 23333 3577788888888887777666678888888
Q ss_pred CC-cccCCCCC-ccccCCCCCceeeccccccccccccccccccccccccCCccc
Q 003046 396 ED-NQLTGPLP-SSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINL 447 (854)
Q Consensus 396 s~-N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~l~~~l~~l~~~~n~~~ 447 (854)
++ |+++ .+| +.|..+++|+.|+|++|+|+ .+|...+.++..|...++..+
T Consensus 185 ~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~~l 236 (350)
T 4ay9_X 185 SDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNL 236 (350)
T ss_dssp TTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCTTC
T ss_pred ccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCCCc
Confidence 74 5666 555 46788889999999999998 888888888877777666544
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.19 E-value=6.2e-11 Score=135.44 Aligned_cols=138 Identities=27% Similarity=0.346 Sum_probs=94.2
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCee
Q 003046 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 344 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~ 344 (854)
+.|+.|+|+.|.++.+| .+..+..|+.|+++.|++.. ... ..++|+
T Consensus 131 ~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~-----------lp~----------------------~~~~L~ 176 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLKK-----------LPD----------------------LPPSLE 176 (454)
T ss_dssp TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSC-----------CCC----------------------CCTTCC
T ss_pred CCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCcc-----------cCC----------------------Cccccc
Confidence 46777888888888876 47888888888888776643 000 113677
Q ss_pred EEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeecccccc
Q 003046 345 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 345 ~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 424 (854)
.|+|++|++++ +| .++++++|+.|+|++|++++.+... ++|+.|+|++|+++ .+|. ++.+++|+.|++++|++
T Consensus 177 ~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 177 FIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLL 249 (454)
T ss_dssp EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCC
T ss_pred EEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcC
Confidence 77777777774 56 5777777777777777777643322 47777777777777 5663 77777777777777777
Q ss_pred ccccccccccccccccccCCc
Q 003046 425 SGTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 425 ~g~ip~~l~~~l~~l~~~~n~ 445 (854)
+ .+|.. ..+++.|++++|.
T Consensus 250 ~-~l~~~-~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 250 K-TLPDL-PPSLEALNVRDNY 268 (454)
T ss_dssp S-SCCSC-CTTCCEEECCSSC
T ss_pred C-ccccc-ccccCEEECCCCc
Confidence 7 46643 4666777777664
No 381
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.19 E-value=5.2e-12 Score=141.14 Aligned_cols=177 Identities=17% Similarity=0.150 Sum_probs=132.9
Q ss_pred ccceeeeecccCCCCCC----Cccc-------chhhhceeccCCCCCccH----HHHHHHHhhcCCCCccCCCCCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSR----GPLL-------NAMEINKYLERNDGSIDG----VAIVSVISLYSSADWAQEGGDPCLPV 328 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~l----pP~i-------~~le~l~~L~l~~~~~~~----~~~~~l~~l~~~~~~~~~~~dpc~~~ 328 (854)
++.|+.|+|+.|.+..+ |+.+ ..+..|+.|+++.|.+.. ..+..+..+..+..+.. .-|.
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L---~~n~-- 133 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL---HNNG-- 133 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEEC---CSSC--
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEEC---cCCC--
Confidence 56788999998766644 3334 577889999999999877 34556666666666532 2221
Q ss_pred CCCeeE----e-CCCCC---------CCeeEEEecCCCCc-ccCC---cccccCccCcEEeccCCccc--c---cCC-CC
Q 003046 329 PWSWLQ----C-NSDPQ---------PSITVIHLSSKNLT-GNIP---SDLTKLSSLVELWLDGNSLT--G---PIP-DF 384 (854)
Q Consensus 329 ~~~~~~----c-~~~~~---------~~L~~L~Ls~n~l~-g~lp---~~~~~l~~L~~L~Ls~N~l~--~---~~~-~~ 384 (854)
..... + ....+ ++|+.|+|++|+|+ +.+| ..|..+++|+.|+|++|+|+ | ..+ .+
T Consensus 134 -l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l 212 (386)
T 2ca6_A 134 -LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGL 212 (386)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTG
T ss_pred -CCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHh
Confidence 11100 0 00111 68999999999998 5566 57888999999999999998 3 455 68
Q ss_pred CCCCCccEEEcCCcccC----CCCCccccCCCCCceeeccccccccc----ccccc----ccccccccccCCcc
Q 003046 385 SGCPDLRIIHLEDNQLT----GPLPSSLMNLPNLRELYVQNNMLSGT----VPSSL----LSKNVVLNYAGNIN 446 (854)
Q Consensus 385 ~~l~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~l~~N~l~g~----ip~~l----~~~l~~l~~~~n~~ 446 (854)
..+++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|+|++. +|..+ +++++.|++++|..
T Consensus 213 ~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i 286 (386)
T 2ca6_A 213 AYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEI 286 (386)
T ss_dssp GGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC
T ss_pred hcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcC
Confidence 89999999999999996 57888999999999999999999865 56655 67789999999854
No 382
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.16 E-value=1.2e-10 Score=122.66 Aligned_cols=138 Identities=18% Similarity=0.112 Sum_probs=108.7
Q ss_pred hhccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 530 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 530 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
+...+|.|+.+.||+.... ++.+++|+...........+.+|+++++.+. |..+.++++++...+..++||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 3566788888999999865 7899999987533233457899999999985 6778889999998889999999999999
Q ss_pred HHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 003046 609 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------ 646 (854)
Q Consensus 609 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------ 646 (854)
|.+.+. +......++.+++++|..||+..
T Consensus 97 l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 97 CSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp HHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred hhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 877531 11223467889999999999810
Q ss_pred --------------CCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 647 --------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 647 --------------~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
.+.++|+|+++.|||++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1368999999999999876566799999764
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.16 E-value=1.1e-10 Score=133.31 Aligned_cols=135 Identities=27% Similarity=0.293 Sum_probs=83.2
Q ss_pred ceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeE
Q 003046 266 FVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITV 345 (854)
Q Consensus 266 ~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~ 345 (854)
.|+.|+|+.|.++.+|+.+ ..|+.|+++.|.+... . ..+++|+.
T Consensus 92 ~L~~L~l~~n~l~~lp~~~---~~L~~L~l~~n~l~~l------------------------------~---~~~~~L~~ 135 (454)
T 1jl5_A 92 HLESLVASCNSLTELPELP---QSLKSLLVDNNNLKAL------------------------------S---DLPPLLEY 135 (454)
T ss_dssp TCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCC------------------------------C---SCCTTCCE
T ss_pred CCCEEEccCCcCCcccccc---CCCcEEECCCCccCcc------------------------------c---CCCCCCCE
Confidence 4566666666666666543 4556666666655420 0 00136777
Q ss_pred EEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccccccc
Q 003046 346 IHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 346 L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
|+|++|+|++ +| +|+++++|++|+|++|+|++.+..+ .+|+.|+|++|++++ +| .++++++|+.|++++|+++
T Consensus 136 L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~ 208 (454)
T 1jl5_A 136 LGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLK 208 (454)
T ss_dssp EECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS
T ss_pred EECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCC
Confidence 7777777774 66 4777777777777777777643322 467777777777774 55 4677777777777777777
Q ss_pred cccccccccccccccccCCc
Q 003046 426 GTVPSSLLSKNVVLNYAGNI 445 (854)
Q Consensus 426 g~ip~~l~~~l~~l~~~~n~ 445 (854)
.+|.. ..+++.|++++|.
T Consensus 209 -~l~~~-~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 209 -KLPDL-PLSLESIVAGNNI 226 (454)
T ss_dssp -SCCCC-CTTCCEEECCSSC
T ss_pred -cCCCC-cCcccEEECcCCc
Confidence 35543 2466666666663
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=8.2e-11 Score=129.30 Aligned_cols=98 Identities=27% Similarity=0.277 Sum_probs=83.3
Q ss_pred CCCeeEeCCC----------CCCCeeEEEecC-CCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcC
Q 003046 329 PWSWLQCNSD----------PQPSITVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLE 396 (854)
Q Consensus 329 ~~~~~~c~~~----------~~~~L~~L~Ls~-n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls 396 (854)
.+..+.|+.. .+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++++|. |.+|++|+.|+|+
T Consensus 9 ~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred cCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 3555666543 345799999996 999987778999999999999999999999987 8999999999999
Q ss_pred CcccCCCCCccccCCCCCceeeccccccccc
Q 003046 397 DNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 427 (854)
Q Consensus 397 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 427 (854)
+|+|++..|..|..++ |+.|+|++|+|...
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9999965555666665 99999999999843
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.13 E-value=4.7e-12 Score=138.41 Aligned_cols=177 Identities=13% Similarity=0.086 Sum_probs=136.2
Q ss_pred cceeeeecccCCCCCCCcccchhhhceeccCCCCCccHH-HHHHHHhhcCCCCccCCCCCCCCCCCCCee-EeCCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGV-AIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~-~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~-~c~~~~~~~ 342 (854)
..++.|++..|.++..++.+..+..|+.|+++.|.+... ....+.++..++.+.. .-|. .... .-....+++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L---~~~~---l~~~~~~~l~~~~~ 143 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL---EGLR---LSDPIVNTLAKNSN 143 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC---TTCB---CCHHHHHHHTTCTT
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC---cCcc---cCHHHHHHHhcCCC
Confidence 567889999999999999999999999999999998865 4445666666666532 2221 1111 111234689
Q ss_pred eeEEEecCC-CCcc-cCCcccccCccCcEEeccCC-ccccc-CCC-CCCCC-CccEEEcCCc--ccC-CCCCccccCCCC
Q 003046 343 ITVIHLSSK-NLTG-NIPSDLTKLSSLVELWLDGN-SLTGP-IPD-FSGCP-DLRIIHLEDN--QLT-GPLPSSLMNLPN 413 (854)
Q Consensus 343 L~~L~Ls~n-~l~g-~lp~~~~~l~~L~~L~Ls~N-~l~~~-~~~-~~~l~-~L~~L~Ls~N--~l~-g~~p~~~~~l~~ 413 (854)
|+.|+|++| .+++ .+|..+.++++|++|+|++| ++++. ++. +..++ +|+.|+|++| .++ +.+|..+..+++
T Consensus 144 L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~ 223 (336)
T 2ast_B 144 LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 223 (336)
T ss_dssp CSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT
T ss_pred CCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCC
Confidence 999999999 7886 37778899999999999999 99863 343 77889 9999999999 455 467778889999
Q ss_pred Cceeeccccc-ccccccccc--ccccccccccCCccc
Q 003046 414 LRELYVQNNM-LSGTVPSSL--LSKNVVLNYAGNINL 447 (854)
Q Consensus 414 L~~L~l~~N~-l~g~ip~~l--~~~l~~l~~~~n~~~ 447 (854)
|+.|+|++|. +++..+..+ +++++.|++++|...
T Consensus 224 L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~ 260 (336)
T 2ast_B 224 LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDI 260 (336)
T ss_dssp CSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTC
T ss_pred CCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCC
Confidence 9999999999 776777666 678899999998643
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.13 E-value=7.7e-13 Score=133.52 Aligned_cols=122 Identities=17% Similarity=0.266 Sum_probs=103.0
Q ss_pred CCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEecCCCCc
Q 003046 275 TYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNLT 354 (854)
Q Consensus 275 n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~Ls~n~l~ 354 (854)
+.++.+|..+..+..|+.|+++.|.+... | ....+++|+.|+|++|+|+
T Consensus 35 ~~l~~l~~~~~~l~~L~~L~ls~n~l~~l--------------------~-----------~~~~l~~L~~L~l~~n~l~ 83 (198)
T 1ds9_A 35 PPIEKMDATLSTLKACKHLALSTNNIEKI--------------------S-----------SLSGMENLRILSLGRNLIK 83 (198)
T ss_dssp TTCCCCHHHHHHTTTCSEEECSEEEESCC--------------------C-----------CHHHHTTCCEEEEEEEEEC
T ss_pred CcHhhhhHHHhcCCCCCEEECCCCCCccc--------------------c-----------ccccCCCCCEEECCCCCcc
Confidence 46777777899999999999999877530 0 0123468999999999999
Q ss_pred ccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCC--ccccCCCCCceeecccccccccccc
Q 003046 355 GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLP--SSLMNLPNLRELYVQNNMLSGTVPS 430 (854)
Q Consensus 355 g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~g~ip~ 430 (854)
.+|..+..+++|+.|+|++|+|++. |.+..+++|+.|+|++|+|++ +| ..+..+++|+.|+|++|++++.+|.
T Consensus 84 -~l~~~~~~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 84 -KIENLDAVADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp -SCSSHHHHHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred -cccchhhcCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 7999899999999999999999985 478889999999999999994 44 4799999999999999999977665
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.10 E-value=7.5e-12 Score=138.68 Aligned_cols=176 Identities=16% Similarity=0.147 Sum_probs=118.9
Q ss_pred cceeeeecccCCCCCCCc-----ccchhh-hceeccCCCCCccHHHHHHHHhh-----cCCCCccCCCCCCCCCCCCCee
Q 003046 265 PFVLSFKFGKTYDSSRGP-----LLNAME-INKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWL 333 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP-----~i~~le-~l~~L~l~~~~~~~~~~~~l~~l-----~~~~~~~~~~~dpc~~~~~~~~ 333 (854)
..|+.|+|+.|.++..++ .+..+. .|+.|+++.|.+....+..+..+ ..++.+.. .-|. ....
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L---s~n~---l~~~ 95 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNL---SGNF---LSYK 95 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEEC---CSSC---GGGS
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEEC---cCCc---CChH
Confidence 347889999999999886 355566 79999999999887666666665 44444422 1111 1111
Q ss_pred EeC-----CCCC-CCeeEEEecCCCCcccCCccccc-----CccCcEEeccCCcccccCC-----CCCCCC-CccEEEcC
Q 003046 334 QCN-----SDPQ-PSITVIHLSSKNLTGNIPSDLTK-----LSSLVELWLDGNSLTGPIP-----DFSGCP-DLRIIHLE 396 (854)
Q Consensus 334 ~c~-----~~~~-~~L~~L~Ls~n~l~g~lp~~~~~-----l~~L~~L~Ls~N~l~~~~~-----~~~~l~-~L~~L~Ls 396 (854)
.+. .... ++|+.|+|++|+|++..+..+.. .++|++|+|++|+|+.... .+..++ +|+.|+|+
T Consensus 96 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls 175 (362)
T 3goz_A 96 SSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLR 175 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECT
T ss_pred HHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeec
Confidence 110 1122 58889999999988666655544 3688999999998885332 244554 88999999
Q ss_pred CcccCCCCCcccc----CC-CCCceeeccccccccc----ccccc---ccccccccccCCcc
Q 003046 397 DNQLTGPLPSSLM----NL-PNLRELYVQNNMLSGT----VPSSL---LSKNVVLNYAGNIN 446 (854)
Q Consensus 397 ~N~l~g~~p~~~~----~l-~~L~~L~l~~N~l~g~----ip~~l---~~~l~~l~~~~n~~ 446 (854)
+|+|++..+..+. .+ ++|+.|+|++|.|++. ++..+ ..+++.|++++|..
T Consensus 176 ~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 237 (362)
T 3goz_A 176 GNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCL 237 (362)
T ss_dssp TSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCC
T ss_pred CCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 9998876665444 44 5899999999988842 55555 23788888888853
No 388
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.02 E-value=6.3e-10 Score=116.49 Aligned_cols=130 Identities=19% Similarity=0.121 Sum_probs=98.2
Q ss_pred ccc-ccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCc--eeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 533 KIG-SGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 533 ~iG-~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
.++ .|..+.||+....+|+.+++|+.... ....+..|+++++.+++.+ +.+++++...++..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55669999998777888999997543 3356889999999996545 45688888888889999999999887
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------- 646 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------- 646 (854)
. .. . . ....++.++++.|..||+..
T Consensus 103 ~--~~-~------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 103 L--SS-H------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp T--TS-C------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred C--cC-c------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 4 21 0 0 12256777888888888642
Q ss_pred ------------CCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 647 ------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 647 ------------~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
...++|+|++|.|||++.+..+.|+|||.+.
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887667799999874
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.02 E-value=2.3e-11 Score=134.82 Aligned_cols=176 Identities=16% Similarity=0.129 Sum_probs=116.5
Q ss_pred cceeeeecccCCCCCCCcc-----cchh-hhceeccCCCCCccHHHHHHHHhh-----cCCCCccCCCCCCCCCCCCCee
Q 003046 265 PFVLSFKFGKTYDSSRGPL-----LNAM-EINKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWL 333 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-----i~~l-e~l~~L~l~~~~~~~~~~~~l~~l-----~~~~~~~~~~~dpc~~~~~~~~ 333 (854)
+.|+.|+|+.|.++..++. +..+ ..|+.|+++.|.+....+..+.+. ..+..+.. .-|. ....
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L---s~N~---l~~~ 153 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNL---RGND---LGIK 153 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEEC---TTSC---GGGS
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEc---cCCc---CCHH
Confidence 5678888899988887765 3333 788889999888877666666554 13333321 1111 1110
Q ss_pred E----eC-CCCC-CCeeEEEecCCCCcccCCcccccC-----ccCcEEeccCCcccc-----cCCCCCC-CCCccEEEcC
Q 003046 334 Q----CN-SDPQ-PSITVIHLSSKNLTGNIPSDLTKL-----SSLVELWLDGNSLTG-----PIPDFSG-CPDLRIIHLE 396 (854)
Q Consensus 334 ~----c~-~~~~-~~L~~L~Ls~n~l~g~lp~~~~~l-----~~L~~L~Ls~N~l~~-----~~~~~~~-l~~L~~L~Ls 396 (854)
. |. .... ++|+.|+|++|+|++..+..+..+ ++|+.|+|++|+|+. ++..+.. .++|+.|+|+
T Consensus 154 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 154 SSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECC
T ss_pred HHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECc
Confidence 0 00 0112 389999999999987776655544 689999999999987 3333544 4589999999
Q ss_pred CcccCCCCC----ccccCCCCCceeeccccccccccc-------ccc--ccccccccccCCcc
Q 003046 397 DNQLTGPLP----SSLMNLPNLRELYVQNNMLSGTVP-------SSL--LSKNVVLNYAGNIN 446 (854)
Q Consensus 397 ~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~ip-------~~l--~~~l~~l~~~~n~~ 446 (854)
+|+|++..+ ..+..+++|+.|+|++|.+.+..+ ..+ +..++.|++++|..
T Consensus 234 ~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l 296 (362)
T 3goz_A 234 LNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEI 296 (362)
T ss_dssp SSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBC
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcC
Confidence 999986544 345677889999999998652222 222 45567888888864
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.96 E-value=2.6e-11 Score=138.51 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=67.1
Q ss_pred cceeeeecccCCCCC-----CCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCC
Q 003046 265 PFVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDP 339 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~-----lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~ 339 (854)
+.|+.|+|+.|.++. ++..+..+..|+.|+++.|.+....+..+.... ...
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~------------------------~~~ 254 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGL------------------------LHP 254 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHH------------------------TST
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHH------------------------hcC
Confidence 356666666666665 345566666677777776666655554443320 011
Q ss_pred CCCeeEEEecCCCCccc----CCcccccCccCcEEeccCCcccccCCC-C-----CCCCCccEEEcCCcccCCC----CC
Q 003046 340 QPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIPD-F-----SGCPDLRIIHLEDNQLTGP----LP 405 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~----lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~-----~~l~~L~~L~Ls~N~l~g~----~p 405 (854)
+++|+.|+|++|+|+.. ++..+.++++|+.|+|++|.|++..+. + ...++|+.|+|++|+|++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 23455555555555532 444444455555555555555432211 1 1123445555555554432 23
Q ss_pred ccccCCCCCceeeccccccc
Q 003046 406 SSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 406 ~~~~~l~~L~~L~l~~N~l~ 425 (854)
..+..+++|+.|+|++|+|+
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCH
T ss_pred HHHhhCCCccEEEccCCccc
Confidence 33444444555555555444
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.93 E-value=1.6e-11 Score=123.69 Aligned_cols=106 Identities=26% Similarity=0.268 Sum_probs=91.1
Q ss_pred CCCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 339 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
.+++|+.|+|++|+|++ +| .+.++++|+.|+|++|+|+.+++.+..+++|+.|+|++|+|++ +| .+..+++|+.|+
T Consensus 46 ~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 46789999999999995 88 8999999999999999999765556778999999999999995 66 689999999999
Q ss_pred cccccccccccc--cc--ccccccccccCCccccc
Q 003046 419 VQNNMLSGTVPS--SL--LSKNVVLNYAGNINLHE 449 (854)
Q Consensus 419 l~~N~l~g~ip~--~l--~~~l~~l~~~~n~~~~~ 449 (854)
|++|+|+ .+|. .+ +.+++.|++++|+..+.
T Consensus 122 l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 122 MSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp ESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CCCCcCC-chhHHHHHhcCCCCCEEEecCCccccc
Confidence 9999999 5554 33 67889999999976543
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.92 E-value=1.5e-10 Score=132.21 Aligned_cols=158 Identities=22% Similarity=0.199 Sum_probs=109.8
Q ss_pred ccceeeeecccCCCC-----CCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCC
Q 003046 264 LPFVLSFKFGKTYDS-----SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSD 338 (854)
Q Consensus 264 l~~l~~l~L~~n~~s-----~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~ 338 (854)
++.|+.|+|+.|.++ .+|..+..+..|+.|+++.|.+....+..+..... .
T Consensus 27 ~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~------------------------~ 82 (461)
T 1z7x_W 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ------------------------T 82 (461)
T ss_dssp HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC------------------------S
T ss_pred cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh------------------------h
Confidence 446677777777777 44566677777888888887777655555544210 0
Q ss_pred CCCCeeEEEecCCCCcc----cCCcccccCccCcEEeccCCcccccCCC------CCCCCCccEEEcCCcccCCC----C
Q 003046 339 PQPSITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPIPD------FSGCPDLRIIHLEDNQLTGP----L 404 (854)
Q Consensus 339 ~~~~L~~L~Ls~n~l~g----~lp~~~~~l~~L~~L~Ls~N~l~~~~~~------~~~l~~L~~L~Ls~N~l~g~----~ 404 (854)
..++|+.|+|++|+|+. .+|..|.++++|++|+|++|++++..+. +..+++|+.|+|++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 01268888888888883 5688888888888888888888754331 23366788888888888853 3
Q ss_pred CccccCCCCCceeeccccccccccccccc-------cccccccccCCc
Q 003046 405 PSSLMNLPNLRELYVQNNMLSGTVPSSLL-------SKNVVLNYAGNI 445 (854)
Q Consensus 405 p~~~~~l~~L~~L~l~~N~l~g~ip~~l~-------~~l~~l~~~~n~ 445 (854)
+..+..+++|+.|+|++|.+++..+..+. .+++.|++++|.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 210 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCG 210 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSC
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCC
Confidence 56667778888888888888754444432 377888888773
No 393
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=4.5e-09 Score=116.06 Aligned_cols=140 Identities=16% Similarity=0.304 Sum_probs=105.0
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEe--cCC-ccchhchHHHHHHhhhcC--CCceeeEeeeeeec---CeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLT--SNS-YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEE---GRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~--~~~-~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~---~~~~lV~e~ 603 (854)
+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.++ +..+.++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46899999999999876 4678888765 322 223567889999999997 45678889888776 458999999
Q ss_pred cCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 003046 604 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------- 646 (854)
Q Consensus 604 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------- 646 (854)
++|..+.+.. -..++...+..++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 123 VSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred cCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9997774422 123566777889999999999999731
Q ss_pred ------------------CCceeccCCCCCCeEEcCCCc--EEEEEeccccc
Q 003046 647 ------------------VPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKF 678 (854)
Q Consensus 647 ------------------~~~ivHrDIkp~NILl~~~~~--~kL~DFGla~~ 678 (854)
.+.++|||+++.|||++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 394
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.85 E-value=2.8e-09 Score=117.36 Aligned_cols=116 Identities=22% Similarity=0.295 Sum_probs=89.9
Q ss_pred CCeeEeCCCC--------CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC--CCCCCCccE-EEcCCc
Q 003046 330 WSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD--FSGCPDLRI-IHLEDN 398 (854)
Q Consensus 330 ~~~~~c~~~~--------~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~l~~L~~-L~Ls~N 398 (854)
+..|.|+..+ +++++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. |.+|++|+. +.+++|
T Consensus 11 ~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 11 NRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp TTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred CCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 4567785432 25799999999999944445799999999999999999876653 889998765 777889
Q ss_pred ccCCCCCccccCCCCCceeecccccccccccccc-cc--ccccccccCCcc
Q 003046 399 QLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL-LS--KNVVLNYAGNIN 446 (854)
Q Consensus 399 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~l-~~--~l~~l~~~~n~~ 446 (854)
+|++..|..|..+++|+.|++++|+|+ .+|... .. .+..|++.++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~ 140 (350)
T 4ay9_X 91 NLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNIN 140 (350)
T ss_dssp TCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTT
T ss_pred cccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhccccc
Confidence 999777889999999999999999999 555543 22 334556655443
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.78 E-value=5.3e-10 Score=124.16 Aligned_cols=45 Identities=7% Similarity=0.036 Sum_probs=26.2
Q ss_pred ccceeeeecccCCCCCCCcc-cchh-----hhceeccCCCCCccHHHHHHH
Q 003046 264 LPFVLSFKFGKTYDSSRGPL-LNAM-----EINKYLERNDGSIDGVAIVSV 308 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~-i~~l-----e~l~~L~l~~~~~~~~~~~~l 308 (854)
++.++.|+|+.|.++..... |..+ ..|+.|+++.|.+....+..+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l 121 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTL 121 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHT
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHH
Confidence 34566777777776654432 3322 467777777777765544443
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=3.1e-09 Score=114.47 Aligned_cols=186 Identities=21% Similarity=0.253 Sum_probs=119.5
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCc--eeeEeeeeeecC---eEEEEEEecC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRN--LVQFLGYCQEEG---RSVLVYEFMH 605 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-Hpn--Iv~l~g~~~~~~---~~~lV~e~~~ 605 (854)
+.++.|....||+.. ..+++|+-... .....+..|+++|+.+. +.. +.+.+......+ ..++||++++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458899999999863 56888985432 33467889999998883 332 344555443333 3478999999
Q ss_pred CCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 003046 606 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG---------------------------------------- 645 (854)
Q Consensus 606 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------- 645 (854)
|.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 100 G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 988765331 2345556677788888888888851
Q ss_pred ---------------CCCceeccCCCCCCeEEcC--CCcEEEEEecccccccCCCcceeeccc--------------ccc
Q 003046 646 ---------------CVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGASHVSSIVR--------------GTV 694 (854)
Q Consensus 646 ---------------~~~~ivHrDIkp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~~~--------------gt~ 694 (854)
..+.++|+|+++.||+++. ...+.|+||+.+...... ........ ...
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHc
Confidence 1146899999999999998 456789999988643221 11100000 000
Q ss_pred cccC-ccccccCcCCCcchhhhHHHHHHHHHhCCccccc
Q 003046 695 GYLD-PEYYISQQLTDKSDVYSFGVILLELISGQEAISN 732 (854)
Q Consensus 695 ~Y~a-PE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~ 732 (854)
+... |+.... .....+.|+++.++|++.+|+.+|..
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 1111 222111 11235899999999999999988743
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=6.7e-09 Score=113.20 Aligned_cols=94 Identities=21% Similarity=0.281 Sum_probs=80.9
Q ss_pred CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCcc-EEEcCCcccCCCCCccccCCCCCcee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR-IIHLEDNQLTGPLPSSLMNLPNLREL 417 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L 417 (854)
+++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++.+.+. |.+|++|+ .|+|.+ +++..-+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 468999999999999555567999999999999998 8777665 99999999 999998 7775667899999999999
Q ss_pred ecccccccccccccccccc
Q 003046 418 YVQNNMLSGTVPSSLLSKN 436 (854)
Q Consensus 418 ~l~~N~l~g~ip~~l~~~l 436 (854)
+|++|+++ .|+...|...
T Consensus 303 ~l~~n~i~-~I~~~aF~~~ 320 (329)
T 3sb4_A 303 LATGDKIT-TLGDELFGNG 320 (329)
T ss_dssp EECSSCCC-EECTTTTCTT
T ss_pred EeCCCccC-ccchhhhcCC
Confidence 99999999 8888776544
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.71 E-value=2.1e-09 Score=119.26 Aligned_cols=139 Identities=20% Similarity=0.138 Sum_probs=109.6
Q ss_pred cceeeeecccCCCCCCC--cccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRG--PLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lp--P~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~ 342 (854)
..|+.|+|+.|.++... .+..++..|+.|+++.|.+....+..+..... . ..++
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~---------~---------------~~~~ 156 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL---------H---------------DQCQ 156 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH---------S---------------TTCC
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH---------h---------------cCCc
Confidence 47899999999987633 44667889999999999998877777766411 0 1137
Q ss_pred eeEEEecCCCCcc----cCCcccccCccCcEEeccCCcccccC----C-CCCCCCCccEEEcCCcccCCC----CCcccc
Q 003046 343 ITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPI----P-DFSGCPDLRIIHLEDNQLTGP----LPSSLM 409 (854)
Q Consensus 343 L~~L~Ls~n~l~g----~lp~~~~~l~~L~~L~Ls~N~l~~~~----~-~~~~l~~L~~L~Ls~N~l~g~----~p~~~~ 409 (854)
|+.|+|++|+|+. .++..+..+++|++|+|++|+|+... . .+..+++|+.|+|++|+|+.. ++..+.
T Consensus 157 L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~ 236 (372)
T 3un9_A 157 ITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAR 236 (372)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHH
T ss_pred cceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHH
Confidence 9999999999974 35566688999999999999998632 2 367788999999999999842 445566
Q ss_pred CCCCCceeeccccccccc
Q 003046 410 NLPNLRELYVQNNMLSGT 427 (854)
Q Consensus 410 ~l~~L~~L~l~~N~l~g~ 427 (854)
.+++|+.|+|++|.|+..
T Consensus 237 ~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 237 EHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HCSSCCEEECTTSSCCHH
T ss_pred hCCCCCEEeccCCCCCHH
Confidence 778999999999999843
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=8.3e-08 Score=104.49 Aligned_cols=79 Identities=18% Similarity=0.078 Sum_probs=61.1
Q ss_pred CccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCc-eeecccccccccccccc---cccccc
Q 003046 364 LSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR-ELYVQNNMLSGTVPSSL---LSKNVV 438 (854)
Q Consensus 364 l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~g~ip~~l---~~~l~~ 438 (854)
+++|+.|+|++|+++.+++. |.+|++|+.|+|++| ++..-+.+|.++++|+ .|+|.+ .++ .|+... +.+|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCE
Confidence 67888888888888877775 888888888888888 7755566788888888 888887 777 777666 345677
Q ss_pred ccccCCc
Q 003046 439 LNYAGNI 445 (854)
Q Consensus 439 l~~~~n~ 445 (854)
+++.+|.
T Consensus 302 l~l~~n~ 308 (329)
T 3sb4_A 302 VLATGDK 308 (329)
T ss_dssp EEECSSC
T ss_pred EEeCCCc
Confidence 7776654
No 400
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.57 E-value=5.2e-08 Score=95.78 Aligned_cols=154 Identities=18% Similarity=0.124 Sum_probs=88.1
Q ss_pred EEeeecCCCCCCCccCCCCCCCCccccCccccccccccccCCccccccccccCCCCCCCChHHHhhhcccccCCceEEee
Q 003046 119 SARINFGADSEAPVRYPDDPFDRIWESDSLKKANYLVDVAAGTEKVSTKLPIDLRSDELPPQKVMQTAVVGTNGSLTYRL 198 (854)
Q Consensus 119 ~~r~~~g~~~~~~iryp~D~~dR~W~~~~~~~~~~~~~~~~~~~~~st~~~i~~~~~~~~P~~v~qtA~t~~~~~l~~~~ 198 (854)
..|.|||+.. +. |..+|.|+++......... . .... .+.....+..|..|+|||=... .++.|..
T Consensus 7 ~~~INcGg~~---~~---d~~gr~w~~D~~~~~~g~~---~---~~~~--~~~~~~~~~~~~~lY~TaR~~~-~~~tY~f 71 (174)
T 2jwp_A 7 IWAVNAGGES---HV---DVHGIHYRKDPLEGRVGRA---S---DYGM--KLPILRSNPEDQVLYQTERYNE-DSFGYDI 71 (174)
T ss_dssp EEEEEETSSS---EE---ETTTEEECSSCSSTTCCCC---C---CCCT--TSCCSSSCHHHHHTTTCCCCCC-SCEEEEE
T ss_pred EEEEECCCCC---cc---CCCCCEEcCCcCcccCCcc---c---cccc--ceEecccCCCCchhhhhhccCC-CCeEEEE
Confidence 5699999843 22 6789999998532110100 0 0001 1111123456889999997643 4677777
Q ss_pred cCCCCCCcceEEEEeccccCCCCCCceEEEEEECCcccccccccccccccCcc-eEEecccccc---------cccccee
Q 003046 199 NLDGFPGFGWAVTYFAEIEDLDPDESRKFRLVLPGQPDVSKAIVNIQENAQGK-YRVYEPGYTN---------LSLPFVL 268 (854)
Q Consensus 199 ~~~~~~~~~y~~~yFae~~~~~~~~~R~Fdv~~n~~~~~~~~~~~~~~~~~~~-~~~~~~~~t~---------~~l~~l~ 268 (854)
+.+. +..+.+-|||+|+.. ...+.|+|||++||+...++..+...+..... +.-+....++ ..-.+..
T Consensus 72 ~v~~-~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L 149 (174)
T 2jwp_A 72 PIKE-EGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKL 149 (174)
T ss_dssp ECCS-CEEEEEEEEEECCSC-CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEE
T ss_pred EeCC-CeEEEEEEEEecccc-CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeE
Confidence 7653 345459999999974 46789999999999988776544322211111 1111111000 0112334
Q ss_pred eeecccCCCCCCCcccchhhhce
Q 003046 269 SFKFGKTYDSSRGPLLNAMEINK 291 (854)
Q Consensus 269 ~l~L~~n~~s~lpP~i~~le~l~ 291 (854)
.+.+.+ .+.-.|.||++|+++
T Consensus 150 ~I~f~p--~~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 150 SVEFVK--GYYDNPKVCALFIMK 170 (174)
T ss_dssp EEEEEC--SSSCSSSEEEEEEES
T ss_pred EEEEec--cCCCCcEEEEEEEEe
Confidence 555554 234569999999875
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.42 E-value=9.3e-08 Score=100.29 Aligned_cols=65 Identities=26% Similarity=0.364 Sum_probs=30.2
Q ss_pred CCCeeEEEecCCCCcc--cCCcccccCccCcEEeccCCcccccC--CCCCCCCCccEEEcCCcccCCCCC
Q 003046 340 QPSITVIHLSSKNLTG--NIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP 405 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g--~lp~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~Ls~N~l~g~~p 405 (854)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.. ..+.++ +|+.|+|++|.|.+.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccC
Confidence 3445555555555554 33344445555555555555555431 112222 45555555555544443
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.37 E-value=6e-08 Score=114.21 Aligned_cols=106 Identities=18% Similarity=0.140 Sum_probs=60.1
Q ss_pred CCCeeEEEecCCCCcccCCccccc-CccCcEEecc----CCcccccCCC------CCCCCCccEEEcCCc--ccCCCCCc
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTK-LSSLVELWLD----GNSLTGPIPD------FSGCPDLRIIHLEDN--QLTGPLPS 406 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~-l~~L~~L~Ls----~N~l~~~~~~------~~~l~~L~~L~Ls~N--~l~g~~p~ 406 (854)
+++|+.|+|+.|++++..+..++. +++|+.|+|+ .|++++.+.+ +.++++|+.|+|++| .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 457777777777777666666665 7777777775 6666654221 344666666666532 24433333
Q ss_pred cccC-CCCCceeeccccccccc-ccccc--ccccccccccCCc
Q 003046 407 SLMN-LPNLRELYVQNNMLSGT-VPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 407 ~~~~-l~~L~~L~l~~N~l~g~-ip~~l--~~~l~~l~~~~n~ 445 (854)
.++. +++|+.|+|++|++++. ++..+ +++++.|++++|+
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 3332 55666666666666532 22221 3455666666654
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.32 E-value=2.2e-06 Score=91.30 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=59.8
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCC---ceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hp---nIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
+.||.|.++.||++...+|+.++||+...........+..|++.|+.+++. .+.+++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 568999999999999888999999997544333456789999999999865 567777764 3689999999987
Q ss_pred H
Q 003046 609 L 609 (854)
Q Consensus 609 L 609 (854)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 404
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=1e-07 Score=99.91 Aligned_cols=86 Identities=22% Similarity=0.343 Sum_probs=66.3
Q ss_pred CeeE--EEecCCCCcccCCc----ccccCccCcEEeccCCcccccC--CC-CCCCCCccEEEcCCcccCCCCCccccCCC
Q 003046 342 SITV--IHLSSKNLTGNIPS----DLTKLSSLVELWLDGNSLTGPI--PD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLP 412 (854)
Q Consensus 342 ~L~~--L~Ls~n~l~g~lp~----~~~~l~~L~~L~Ls~N~l~~~~--~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 412 (854)
.|.. ++++.|++. .++. ...++++|+.|+|++|+|+++. |. +..+++|+.|+|++|+|++. ..+..+.
T Consensus 142 ~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~ 218 (267)
T 3rw6_A 142 DLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIK 218 (267)
T ss_dssp HHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGT
T ss_pred chhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcc
Confidence 3444 667777544 3333 3356899999999999999844 44 56899999999999999964 4455555
Q ss_pred --CCceeecccccccccccc
Q 003046 413 --NLRELYVQNNMLSGTVPS 430 (854)
Q Consensus 413 --~L~~L~l~~N~l~g~ip~ 430 (854)
+|+.|+|++|+|++.+|.
T Consensus 219 ~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 219 GLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp TSCCSEEECTTSTTGGGCSS
T ss_pred cCCcceEEccCCcCccccCc
Confidence 999999999999988873
No 405
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.29 E-value=1.6e-06 Score=93.90 Aligned_cols=131 Identities=16% Similarity=0.258 Sum_probs=93.8
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCC----CceeeEeeeeeecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH----RNLVQFLGYCQEEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H----pnIv~l~g~~~~~~~~~lV~e~~~~g 607 (854)
+.++.|....||+. ++.+++|+.... .....+..|.++|+.+.+ ..+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 56899999999988 677888876422 223458899999888865 223444544 4668999999998
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCC----------------------------------------
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV---------------------------------------- 647 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~---------------------------------------- 647 (854)
++.+... ..++..++..++.++++.|+.||+...
T Consensus 113 ~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 113 RITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8764321 123445556677777777777774321
Q ss_pred --------------------CceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 648 --------------------PAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 648 --------------------~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
+.++|+|++|.|||++.+..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999976679999998854
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.27 E-value=1.1e-07 Score=111.89 Aligned_cols=179 Identities=12% Similarity=0.050 Sum_probs=100.3
Q ss_pred cccceeeeecccCCCCCCCcc-cchh--hhceeccCCCCC-ccHHHHHHHH-hhcCCCCccCCCCCCCCC--CCCCeeEe
Q 003046 263 SLPFVLSFKFGKTYDSSRGPL-LNAM--EINKYLERNDGS-IDGVAIVSVI-SLYSSADWAQEGGDPCLP--VPWSWLQC 335 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~lpP~-i~~l--e~l~~L~l~~~~-~~~~~~~~l~-~l~~~~~~~~~~~dpc~~--~~~~~~~c 335 (854)
.++.|+.|+|..+.++...+. +..+ ..|+.|++..+. +....+..+. ++..++.+.. .-|.- .+..|+..
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L---~~~~~~~~~~~~l~~ 186 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLM---EESSFSEKDGKWLHE 186 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEEC---TTCEEECCCSHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEEC---ccccccCcchhHHHH
Confidence 356778888888766544332 4443 338888887665 4444444433 3334444321 11210 00011111
Q ss_pred CCCCCCCeeEEEecCCCCc----ccCCcccccCccCcEEeccCCcccccCCCCCCCCCccEEEcCCcccC---CCCCccc
Q 003046 336 NSDPQPSITVIHLSSKNLT----GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLT---GPLPSSL 408 (854)
Q Consensus 336 ~~~~~~~L~~L~Ls~n~l~----g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~---g~~p~~~ 408 (854)
-...+++|+.|+|++|+++ +.++..+.++++|+.|+|++|.+.+.+..+.++++|+.|+++.+... +..+..+
T Consensus 187 ~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 187 LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 1123467888888888876 34555566778888888888877775544666677777777653322 2334455
Q ss_pred cCCCCCceeecccccccccccccc--ccccccccccCCc
Q 003046 409 MNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNI 445 (854)
Q Consensus 409 ~~l~~L~~L~l~~N~l~g~ip~~l--~~~l~~l~~~~n~ 445 (854)
..+++|+.|+++++... .+|..+ +++++.|++++|.
T Consensus 267 ~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp CCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCC
T ss_pred hccccccccCccccchh-HHHHHHhhcCCCcEEecCCCc
Confidence 66666666666665433 555544 5566666766665
No 407
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.25 E-value=2.9e-08 Score=116.94 Aligned_cols=182 Identities=15% Similarity=0.029 Sum_probs=106.0
Q ss_pred cccceeeeecccCCCCC--CCcccchhhhceeccCCCCCccHHHHHHHHh-hcCCCCccCCCC-----CCCCCCCCCeeE
Q 003046 263 SLPFVLSFKFGKTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVIS-LYSSADWAQEGG-----DPCLPVPWSWLQ 334 (854)
Q Consensus 263 ~l~~l~~l~L~~n~~s~--lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~-l~~~~~~~~~~~-----dpc~~~~~~~~~ 334 (854)
.++.|+.|+|..|.++. ++..+..+..|+.|++.+| +....+..+.. +..++.+..... ..|......++.
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 35678888988888654 2233667788888888877 44445555443 344444421110 122111111110
Q ss_pred eCCCCCCCeeEEEecCCCCcccCCcccc-cCccCcEEecc--C----CcccccCCC------CCCCCCccEEEcCCcccC
Q 003046 335 CNSDPQPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLD--G----NSLTGPIPD------FSGCPDLRIIHLEDNQLT 401 (854)
Q Consensus 335 c~~~~~~~L~~L~Ls~n~l~g~lp~~~~-~l~~L~~L~Ls--~----N~l~~~~~~------~~~l~~L~~L~Ls~N~l~ 401 (854)
.-...+++|+.|.++.|++++..+..+. .+++|+.|+|+ + |+++..+.+ +.++++|+.|+|++ +++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 0001246788888888888766666665 47788888887 4 566643321 45567777777766 555
Q ss_pred CCCCccccC-CCCCceeecccccccccccccc---ccccccccccCCcc
Q 003046 402 GPLPSSLMN-LPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNIN 446 (854)
Q Consensus 402 g~~p~~~~~-l~~L~~L~l~~N~l~g~ip~~l---~~~l~~l~~~~n~~ 446 (854)
+..+..++. +++|+.|+|++|.+++..+..+ +++++.|++++|+.
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 444445554 6777777777777765444443 56677777777653
No 408
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.20 E-value=7.2e-06 Score=86.15 Aligned_cols=134 Identities=17% Similarity=0.120 Sum_probs=94.5
Q ss_pred cccccCcE-EEEEEEEC-CCcEEEEEEEecCCccchhchHHHHHHhhhcC-CCceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 533 KIGSGGFG-VVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 533 ~iG~G~fg-~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
.+..|..| .||+.... ++..+++|+-... ...++..|...|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44556555 68987765 4567899986532 3456888999998884 33366788999999999999999999887
Q ss_pred HHhhcccccccccccHHHHHHHHHHHHHHHHHHHhC--------------------------------------------
Q 003046 610 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG-------------------------------------------- 645 (854)
Q Consensus 610 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------------- 645 (854)
.+..... ......++.+++..|..||+.
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6654211 112234555566666666641
Q ss_pred -----------CCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 646 -----------CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 646 -----------~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
..+.++|+|+++.|||++.++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01247999999999999987777799999874
No 409
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.18 E-value=6.2e-06 Score=88.70 Aligned_cols=135 Identities=20% Similarity=0.245 Sum_probs=89.2
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCC---ceeeEeeeee-ecCeEEEEEEecCCC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQ-EEGRSVLVYEFMHNG 607 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hp---nIv~l~g~~~-~~~~~~lV~e~~~~g 607 (854)
+.++.|....||+. ++.+++|+-. .......+..|+++|+.+.+. .+.+.+.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888999987 5678888842 223346788999999999652 3456666664 455678999999998
Q ss_pred CHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 003046 608 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG------------------------------------------ 645 (854)
Q Consensus 608 sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------ 645 (854)
++.+.... .++...+..++.++++.|..||+.
T Consensus 99 ~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 87653211 112223333344444444444431
Q ss_pred ---------------CCCceeccCCCCCCeEEcC---CCc-EEEEEeccccc
Q 003046 646 ---------------CVPAIIHRDLKSSNILLDK---HMR-AKVSDFGLSKF 678 (854)
Q Consensus 646 ---------------~~~~ivHrDIkp~NILl~~---~~~-~kL~DFGla~~ 678 (854)
..+.++|+|+++.|||++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2236799999999999997 455 48999998753
No 410
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.11 E-value=5.4e-06 Score=91.02 Aligned_cols=79 Identities=4% Similarity=0.047 Sum_probs=56.0
Q ss_pred ccc-cccCcEEEEEEEEC-------CCcEEEEEEEecCC---ccchhchHHHHHHhhhcCC---CceeeEeeeeeec---
Q 003046 532 KKI-GSGGFGVVYYGKLK-------DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHH---RNLVQFLGYCQEE--- 594 (854)
Q Consensus 532 ~~i-G~G~fg~Vy~~~~~-------~~~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~~~--- 594 (854)
+.| +.|....+|+.... +++.+++|+..... ......+..|+.+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999988764 26678888765322 1123568899999998853 3466788877655
Q ss_pred CeEEEEEEecCCCCHH
Q 003046 595 GRSVLVYEFMHNGTLK 610 (854)
Q Consensus 595 ~~~~lV~e~~~~gsL~ 610 (854)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 411
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.07 E-value=1.9e-05 Score=77.26 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=66.4
Q ss_pred CceeccCCCCCcceeeecccCCceeEEeEEeeecCcCCCCCCCeeEEEeCCcee-eeEEec---CCCCceEEEEEEE---
Q 003046 1 MTLRHFPADSRKYCYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHW-STIVIS---DAATIEVRELIFL--- 73 (854)
Q Consensus 1 ~tlr~fp~~~~~~cy~~~~~~~~~y~~r~~~~~g~~d~~~~~p~fd~~~~~~~w-~~v~~~---~~~~~~~~e~~~~--- 73 (854)
.|-|.||. +.+|.+|+.++|+|+||.-|.--.|.. ....+||++|+|..- .-.+.. ....+.+.|..+.
T Consensus 58 ~TaR~~~~---~~tY~f~v~~~G~Y~VrLhF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~ 133 (174)
T 2jwp_A 58 QTERYNED---SFGYDIPIKEEGEYVLVLKFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKK 133 (174)
T ss_dssp TCCCCCCS---CEEEEEECCSCEEEEEEEEEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEET
T ss_pred hhhccCCC---CeEEEEEeCCCeEEEEEEEEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEec
Confidence 37789884 579999999899999999997666654 456799999999532 222221 1222444444443
Q ss_pred ----------ecCCCceEEEecCCCCCceeeeeeeeec
Q 003046 74 ----------ASSPKIDVCLSNATTGQPFISTLELRQF 101 (854)
Q Consensus 74 ----------~~~~~~~vcl~~~~~~~pfis~le~~~l 101 (854)
..+..+.|.|.....+.|||++||+.+-
T Consensus 134 ~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 134 GKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMKG 171 (174)
T ss_dssp TEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEEESS
T ss_pred CceeeeeeecccCCeEEEEEeccCCCCcEEEEEEEEeC
Confidence 2445677777754356799999999863
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.06 E-value=9.7e-07 Score=87.61 Aligned_cols=118 Identities=10% Similarity=0.093 Sum_probs=82.8
Q ss_pred ccchhhhceeccCCCC-CccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEeCCCCCCCeeEEEecCCCCccc----C
Q 003046 283 LLNAMEINKYLERNDG-SIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNLTGN----I 357 (854)
Q Consensus 283 ~i~~le~l~~L~l~~~-~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~Ls~n~l~g~----l 357 (854)
.+.....|+.|+|+.| .+.......+..... ..++|+.|+|++|+|... +
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~-------------------------~~~~L~~L~Ls~n~i~~~g~~~l 85 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALK-------------------------TNTYVKKFSIVGTRSNDPVAFAL 85 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHT-------------------------TCCSCCEEECTTSCCCHHHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHH-------------------------hCCCcCEEECcCCCCChHHHHHH
Confidence 3455566888888888 887777776665421 113688888998888642 3
Q ss_pred CcccccCccCcEEeccCCccccc-----CCCCCCCCCccEEEc--CCcccCCC----CCccccCCCCCceeeccccccc
Q 003046 358 PSDLTKLSSLVELWLDGNSLTGP-----IPDFSGCPDLRIIHL--EDNQLTGP----LPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 358 p~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
...+...++|++|+|++|+|... ...+...++|+.|+| ++|.|... +...+...++|+.|+|++|.|.
T Consensus 86 ~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 86 AEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 44556667888888888888763 224666778888888 77888743 3345556678888888888876
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.05 E-value=1.7e-06 Score=95.27 Aligned_cols=104 Identities=18% Similarity=0.286 Sum_probs=58.1
Q ss_pred CCeeEEEecCCCCcccCCcccc--cCccCcEEeccC--Ccccc------cCCCC--CCCCCccEEEcCCcccCCCCCccc
Q 003046 341 PSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDG--NSLTG------PIPDF--SGCPDLRIIHLEDNQLTGPLPSSL 408 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~--~l~~L~~L~Ls~--N~l~~------~~~~~--~~l~~L~~L~Ls~N~l~g~~p~~~ 408 (854)
++|+.|+|..|.+....-..+. .+++|+.|+|+. |...+ +-+.+ ..+++|+.|+|++|++....+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 4677777777766543333443 567777777642 22111 11112 236777777777777664333333
Q ss_pred c---CCCCCceeeccccccccc----ccccc--ccccccccccCC
Q 003046 409 M---NLPNLRELYVQNNMLSGT----VPSSL--LSKNVVLNYAGN 444 (854)
Q Consensus 409 ~---~l~~L~~L~l~~N~l~g~----ip~~l--~~~l~~l~~~~n 444 (854)
. .+++|+.|+|+.|.|++. ++..+ +++|+.|++++|
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 2 466777777777777643 33332 455666777665
No 414
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.02 E-value=1.6e-05 Score=87.57 Aligned_cols=141 Identities=13% Similarity=0.185 Sum_probs=88.3
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCc--eeeEeeeeeec-CeEEEEEEecCCCC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEE-GRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~g~~~~~-~~~~lV~e~~~~gs 608 (854)
+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4678899999999886 4788999987432 35888999999886533 45677766654 66899999999866
Q ss_pred HHHh------------------hccccccc-c------------cccHHHH---------------------HHHHHHHH
Q 003046 609 LKEH------------------LYGTLTHE-Q------------RINWIKR---------------------LEIAEDAA 636 (854)
Q Consensus 609 L~~~------------------L~~~~~~~-~------------~l~~~~~---------------------~~i~~~ia 636 (854)
+.+. |+...... . .-.|... ......+.
T Consensus 121 l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 200 (362)
T 3ovc_A 121 LQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALD 200 (362)
T ss_dssp TTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHH
Confidence 5321 11100000 0 0001100 01111222
Q ss_pred HHHHHHHhCC-CCceeccCCCCCCeEEcCCCcEEEEEeccccc
Q 003046 637 KGIEYLHTGC-VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 678 (854)
Q Consensus 637 ~gL~yLH~~~-~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~ 678 (854)
..+.++.... .+.++|+|+++.|||++.+..+.|+||+.+..
T Consensus 201 ~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 201 ELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2223332211 14789999999999998877788999998864
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.94 E-value=1.1e-05 Score=90.26 Aligned_cols=170 Identities=12% Similarity=0.036 Sum_probs=106.8
Q ss_pred ccceeeeecccCCCCCCCcccchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeEe-CCCCCCC
Q 003046 264 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPS 342 (854)
Q Consensus 264 l~~l~~l~L~~n~~s~lpP~i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~c-~~~~~~~ 342 (854)
.++|+.++|..|.++.+|+..-....|+.+.+.++ +..+...++.....+...... .....++- .+.+ .+
T Consensus 179 c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~-------~~l~~I~~~aF~~-~~ 249 (401)
T 4fdw_A 179 CYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP-------ENVSTIGQEAFRE-SG 249 (401)
T ss_dssp CTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC-------TTCCEECTTTTTT-CC
T ss_pred cccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC-------CCccCcccccccc-CC
Confidence 45677788888888888877444567777777643 332222223333223222110 00111111 1112 47
Q ss_pred eeEEEecCCCCcccCCcccccCccCcEEeccCCccc-----ccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCce
Q 003046 343 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-----GPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 343 L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~-----~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 416 (854)
|+.|.| .|+++..-+..|.+|++|+.|+|.+|.+. .+.+. |.+|++|+.++|. |.++..-..+|.+|++|+.
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCE
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccE
Confidence 888888 55677455678888999999999888876 33443 8889999999998 4577455568888899999
Q ss_pred eecccccccccccccccc--ccccccccCCcc
Q 003046 417 LYVQNNMLSGTVPSSLLS--KNVVLNYAGNIN 446 (854)
Q Consensus 417 L~l~~N~l~g~ip~~l~~--~l~~l~~~~n~~ 446 (854)
|.|.+| ++ .|+...|. +++.+.+.+|..
T Consensus 328 l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 328 LTIPAN-VT-QINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp EEECTT-CC-EECTTSSSSSCCCEEEECCSSC
T ss_pred EEECcc-cc-EEcHHhCCCCCCCEEEEcCCCC
Confidence 998554 77 67666533 567777777643
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.92 E-value=1.2e-06 Score=86.81 Aligned_cols=106 Identities=18% Similarity=0.260 Sum_probs=81.4
Q ss_pred CCCeeEEEecCC-CCccc----CCcccccCccCcEEeccCCcccccC-----CCCCCCCCccEEEcCCcccCCC----CC
Q 003046 340 QPSITVIHLSSK-NLTGN----IPSDLTKLSSLVELWLDGNSLTGPI-----PDFSGCPDLRIIHLEDNQLTGP----LP 405 (854)
Q Consensus 340 ~~~L~~L~Ls~n-~l~g~----lp~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~l~~L~~L~Ls~N~l~g~----~p 405 (854)
.++|+.|+|++| +|... +...+...++|++|+|++|+|...- ..+...++|+.|+|++|+|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 358999999999 88742 4556677899999999999997521 1255678999999999999843 46
Q ss_pred ccccCCCCCceeec--ccccccccccccc------ccccccccccCCc
Q 003046 406 SSLMNLPNLRELYV--QNNMLSGTVPSSL------LSKNVVLNYAGNI 445 (854)
Q Consensus 406 ~~~~~l~~L~~L~l--~~N~l~g~ip~~l------~~~l~~l~~~~n~ 445 (854)
..+...++|+.|+| ++|.|...--..+ ...++.|++++|.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 67888889999999 8899984432222 3567888888874
No 417
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.92 E-value=1.1e-06 Score=103.40 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=16.9
Q ss_pred CCeeEEEecCC-CCcccCCcccccCccCcEEec
Q 003046 341 PSITVIHLSSK-NLTGNIPSDLTKLSSLVELWL 372 (854)
Q Consensus 341 ~~L~~L~Ls~n-~l~g~lp~~~~~l~~L~~L~L 372 (854)
++|+.|+|++| .+. .+|..+.++++|+.|++
T Consensus 211 ~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 211 PNLKSLKLNRAVPLE-KLATLLQRAPQLEELGT 242 (594)
T ss_dssp TTCCEEECCTTSCHH-HHHHHHHHCTTCSEEEC
T ss_pred CCCcEEecCCCCcHH-HHHHHHhcCCcceEccc
Confidence 45666666655 333 35555555566666653
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.86 E-value=2.9e-06 Score=93.42 Aligned_cols=62 Identities=18% Similarity=0.197 Sum_probs=28.6
Q ss_pred CccCcEEeccCCcccccCCC----CCCCCCccEEEcCCcccCCC----CCccccCCCCCceeeccccccc
Q 003046 364 LSSLVELWLDGNSLTGPIPD----FSGCPDLRIIHLEDNQLTGP----LPSSLMNLPNLRELYVQNNMLS 425 (854)
Q Consensus 364 l~~L~~L~Ls~N~l~~~~~~----~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 425 (854)
+++|+.|+|++|.+....+. ...+++|+.|+|+.|+|.+. ++..+..+++|+.|+|++|.|+
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 45555555555555432110 12345555555555555432 2223334455555555555554
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.75 E-value=6.1e-05 Score=81.69 Aligned_cols=140 Identities=15% Similarity=0.223 Sum_probs=79.6
Q ss_pred cccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCC--CceeeEee------eeeecCeEEEEEEec
Q 003046 533 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH--RNLVQFLG------YCQEEGRSVLVYEFM 604 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H--pnIv~l~g------~~~~~~~~~lV~e~~ 604 (854)
.|+.|..+.||+....+| .+++|+.... ...+..|+.+++.+.. -.+.+++. +....+..+++|+|+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 455677889999987644 5889988642 2344456666665531 12233332 123466789999999
Q ss_pred CCCCHH-----------H---hhccccc----c-c-----ccccHHHH-------------------------------H
Q 003046 605 HNGTLK-----------E---HLYGTLT----H-E-----QRINWIKR-------------------------------L 629 (854)
Q Consensus 605 ~~gsL~-----------~---~L~~~~~----~-~-----~~l~~~~~-------------------------------~ 629 (854)
+|..+. + .+|.... . . ..-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 1 1121100 0 0 00122110 0
Q ss_pred HHHHHHHHHHHHHHh----------CCCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 630 EIAEDAAKGIEYLHT----------GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 630 ~i~~~ia~gL~yLH~----------~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
.+...+..++.+|+. .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111234446667763 023489999999999999888899999999764
No 420
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.68 E-value=0.0001 Score=82.00 Aligned_cols=74 Identities=15% Similarity=0.119 Sum_probs=48.6
Q ss_pred ccccccCcEEEEEEEEC-CCcEEEEEEEecCCc-------cchhchHHHHHHhhhcCC--Cc-eeeEeeeeeecCeEEEE
Q 003046 532 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------QGKREFTNEVTLLSRIHH--RN-LVQFLGYCQEEGRSVLV 600 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-------~~~~~~~~E~~~l~~l~H--pn-Iv~l~g~~~~~~~~~lV 600 (854)
+.||.|.++.||++... +++.++||....... .....+..|.++|+.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 56899999999999764 468899998653211 123446778888888742 33 3355544 34456899
Q ss_pred EEecCCC
Q 003046 601 YEFMHNG 607 (854)
Q Consensus 601 ~e~~~~g 607 (854)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00016 Score=76.65 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=54.2
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCC---CceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH---RNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
+.+|.|..+.||+.+..+|+.|.||+-..........|..|++.|+.+.- --+.+.+++. ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 56899999999999999999999998765544445568899999988842 1234444432 2378999998764
No 422
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.58 E-value=6.6e-05 Score=83.80 Aligned_cols=156 Identities=11% Similarity=0.018 Sum_probs=104.2
Q ss_pred cceeeeecccCCCCCCCcc-cchhhhceeccCCCCCccHHHHHHHHhhcCCCCccCCCCCCCCCCCCCeeE-eCCCCCCC
Q 003046 265 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQPS 342 (854)
Q Consensus 265 ~~l~~l~L~~n~~s~lpP~-i~~le~l~~L~l~~~~~~~~~~~~l~~l~~~~~~~~~~~dpc~~~~~~~~~-c~~~~~~~ 342 (854)
+.|+.+.|. +.++.+++. +..+..|+.+.+.++ +..+...++.. ..+..... |.....++ ..+.++++
T Consensus 203 ~~L~~l~lp-~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-------p~~i~~I~~~aF~~c~~ 272 (401)
T 4fdw_A 203 AGIEEVLLP-VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-------PNGVTNIASRAFYYCPE 272 (401)
T ss_dssp CCCSEEECC-TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-------ETTCCEECTTTTTTCTT
T ss_pred cccCEEEeC-CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-------CCCccEEChhHhhCCCC
Confidence 345666665 447777766 777888888888754 22111111111 11111100 00011111 12345679
Q ss_pred eeEEEecCCCCc-----ccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCce
Q 003046 343 ITVIHLSSKNLT-----GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 416 (854)
Q Consensus 343 L~~L~Ls~n~l~-----g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 416 (854)
|+.|+|.+|.+. ..-+..|.+|++|+.|+|. |+++.+... |.+|++|+.|+|..| ++..-+.+|.++ +|+.
T Consensus 273 L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~ 349 (401)
T 4fdw_A 273 LAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKE 349 (401)
T ss_dssp CCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCE
T ss_pred CCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCE
Confidence 999999998875 3556789999999999999 558877665 999999999999666 765667789999 9999
Q ss_pred eecccccccccccccccc
Q 003046 417 LYVQNNMLSGTVPSSLLS 434 (854)
Q Consensus 417 L~l~~N~l~g~ip~~l~~ 434 (854)
|++++|.+. .++...+.
T Consensus 350 l~l~~n~~~-~l~~~~F~ 366 (401)
T 4fdw_A 350 VKVEGTTPP-QVFEKVWY 366 (401)
T ss_dssp EEECCSSCC-BCCCSSCC
T ss_pred EEEcCCCCc-cccccccc
Confidence 999999988 66665543
No 423
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.52 E-value=0.00028 Score=75.79 Aligned_cols=74 Identities=19% Similarity=0.242 Sum_probs=58.9
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcC---CCceeeEeeeeeecCeEEEEEEecCCCC
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSVLVYEFMHNGT 608 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~~~lV~e~~~~gs 608 (854)
+.|+.|....+|+.... ++.++||+.... ....+..|.+.|+.+. ...+.+.++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 45889999999998764 678899987532 3456888999998884 3567788888888888999999999876
Q ss_pred H
Q 003046 609 L 609 (854)
Q Consensus 609 L 609 (854)
+
T Consensus 118 ~ 118 (312)
T 3jr1_A 118 N 118 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.46 E-value=0.00013 Score=82.03 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=48.2
Q ss_pred CceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccCc---CCCcchhhhHHHHHHHHH
Q 003046 648 PAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELI 724 (854)
Q Consensus 648 ~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwS~Gvvl~ell 724 (854)
+.++|||+++.|||++.++ ++|+||+.+...............-...|++|+...... .....++......+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999876 999999988643211110000000123466666553211 112345667888888887
Q ss_pred hCC
Q 003046 725 SGQ 727 (854)
Q Consensus 725 tG~ 727 (854)
++.
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.14 E-value=7.9e-05 Score=72.59 Aligned_cols=85 Identities=12% Similarity=0.086 Sum_probs=64.4
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCc-ccc-cCCCCCCC----CCccEEEcCCcc-cCCCCCccccCCCC
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNS-LTG-PIPDFSGC----PDLRIIHLEDNQ-LTGPLPSSLMNLPN 413 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 413 (854)
.+|+.|||+++.|+..--..+.+|++|+.|+|+++. |+. -+..+..+ ++|+.|+|+++. |+..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 379999999999885545567889999999999985 664 22335554 479999999974 77433345778899
Q ss_pred Cceeeccccc-cc
Q 003046 414 LRELYVQNNM-LS 425 (854)
Q Consensus 414 L~~L~l~~N~-l~ 425 (854)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999886 54
No 426
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.07 E-value=0.0022 Score=69.22 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=73.8
Q ss_pred cccccCcEE-EEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCC--ceeeEeeeeeecCeEEEEEEecCCCCH
Q 003046 533 KIGSGGFGV-VYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR--NLVQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 533 ~iG~G~fg~-Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hp--nIv~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
.|+.|.... +|+....+++.+++|...... ...+..|+.+++.+... .+.+++.+....+ +++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 455555444 667665446777777643221 14567788888877432 3455666644333 689999987666
Q ss_pred HHhhccccc---------------------c-cccccH-------------HHH--H-----HHHHHHHHHHHHHH---h
Q 003046 610 KEHLYGTLT---------------------H-EQRINW-------------IKR--L-----EIAEDAAKGIEYLH---T 644 (854)
Q Consensus 610 ~~~L~~~~~---------------------~-~~~l~~-------------~~~--~-----~i~~~ia~gL~yLH---~ 644 (854)
.+.+..... . ...++. ... . .....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 544321100 0 000110 000 0 00011122222221 1
Q ss_pred CCCCceeccCCCCCCeEEcCC----CcEEEEEeccccc
Q 003046 645 GCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKF 678 (854)
Q Consensus 645 ~~~~~ivHrDIkp~NILl~~~----~~~kL~DFGla~~ 678 (854)
.....++|||+.+.|||++.+ ..+.|+||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123489999999999999875 6899999998864
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.84 E-value=0.0014 Score=60.57 Aligned_cols=36 Identities=33% Similarity=0.339 Sum_probs=17.3
Q ss_pred CccEEEcCCcccCCCCCccccCCCCCceeecccccc
Q 003046 389 DLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 424 (854)
Q Consensus 389 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 424 (854)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555555555533333445555555544444433
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.84 E-value=0.0024 Score=68.56 Aligned_cols=143 Identities=16% Similarity=0.211 Sum_probs=80.4
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCce--eeEeee------eeecCeEEEEEEe
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL--VQFLGY------CQEEGRSVLVYEF 603 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnI--v~l~g~------~~~~~~~~lV~e~ 603 (854)
+.|+.|....+|+....+| .+++|+.... .....+..|+.+++.+...++ .+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3467788889999987655 6788987642 123456678888877743222 233321 1234567899999
Q ss_pred cCCCCHHH-----------h---hccc---cccc-----ccccHHHHHH------------HHHHHHHHHHHHHhC----
Q 003046 604 MHNGTLKE-----------H---LYGT---LTHE-----QRINWIKRLE------------IAEDAAKGIEYLHTG---- 645 (854)
Q Consensus 604 ~~~gsL~~-----------~---L~~~---~~~~-----~~l~~~~~~~------------i~~~ia~gL~yLH~~---- 645 (854)
++|..+.. . ++.. .... ....|..... +...+...++++++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865311 0 1111 0000 0012322110 111244455566532
Q ss_pred CCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 646 CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 646 ~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
...+++|+|+++.|||++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12479999999999999987666899998764
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.76 E-value=0.0034 Score=66.77 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=44.3
Q ss_pred ccccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCce-eeEeeeeeecCeEEEEEEec-CCCCH
Q 003046 532 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFM-HNGTL 609 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~lV~e~~-~~gsL 609 (854)
+.|+.|....+|+. +.+++|+..... ........|+.+++.+...++ .++++++. +.-++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~-~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGT-EEYINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCc-cceeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCccC
Confidence 56888999999998 568888875432 112334678888887753333 35555443 3346899999 55444
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.75 E-value=0.0015 Score=60.37 Aligned_cols=56 Identities=32% Similarity=0.520 Sum_probs=47.9
Q ss_pred eEEEecCCCCc-ccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccC
Q 003046 344 TVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLT 401 (854)
Q Consensus 344 ~~L~Ls~n~l~-g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 401 (854)
..++.++++|+ ..+|..|. .+|+.|+|++|+|+.+++. |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 37889999997 46776554 4799999999999998887 788999999999999876
No 431
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.74 E-value=0.0029 Score=71.03 Aligned_cols=72 Identities=14% Similarity=0.316 Sum_probs=49.2
Q ss_pred ccccccCcEEEEEEEECC--------CcEEEEEEEecCCccchhchHHHHHHhhhcCCCce-eeEeeeeeecCeEEEEEE
Q 003046 532 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~--------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~lV~e 602 (854)
+.|+.|....+|+....+ ++.+++|+.... .....+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 457888889999998753 478999987432 111455679998888854334 566766542 28999
Q ss_pred ecCCCCH
Q 003046 603 FMHNGTL 609 (854)
Q Consensus 603 ~~~~gsL 609 (854)
|++|.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.53 E-value=0.011 Score=63.55 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=80.3
Q ss_pred cccccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCCCc--eeeEeee-----eeecCeEEEEEEecC
Q 003046 533 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY-----CQEEGRSVLVYEFMH 605 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~g~-----~~~~~~~~lV~e~~~ 605 (854)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.+++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789998877777789999986332 23456777888888774222 3334432 123456688999998
Q ss_pred CCCHH-----H------h---hccccc-----ccccccHHHH----HH---------------HHHHHHHHHHHHHhC--
Q 003046 606 NGTLK-----E------H---LYGTLT-----HEQRINWIKR----LE---------------IAEDAAKGIEYLHTG-- 645 (854)
Q Consensus 606 ~gsL~-----~------~---L~~~~~-----~~~~l~~~~~----~~---------------i~~~ia~gL~yLH~~-- 645 (854)
|..+. . . +|.... ....+++... .. +...+...++.+.+.
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75432 0 1 111100 0111111110 00 011111223333221
Q ss_pred --CCCceeccCCCCCCeEEcCCCcEEEEEecccc
Q 003046 646 --CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 677 (854)
Q Consensus 646 --~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~ 677 (854)
....++|+|+++.|||++ + .+.|+||+.+.
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 234789999999999999 4 89999998775
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.44 E-value=0.0071 Score=66.58 Aligned_cols=141 Identities=16% Similarity=0.219 Sum_probs=79.8
Q ss_pred ccccccCcEEEEEEEEC--------CCcEEEEEEEecCCccchhchHHHHHHhhhcCCCc-eeeEeeeeeecCeEEEEEE
Q 003046 532 KKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~--------~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~~~~~lV~e 602 (854)
+.|..|-...+|+.... +++.+++|+... .........+|.++++.+.-.+ ..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35666777889998864 247899998532 2223455678999998884322 3566666643 28999
Q ss_pred ecCCCCHHHh-----------------hcccc-cccccc--cHHHHHHHHHHHH-------------------HHHHHH-
Q 003046 603 FMHNGTLKEH-----------------LYGTL-THEQRI--NWIKRLEIAEDAA-------------------KGIEYL- 642 (854)
Q Consensus 603 ~~~~gsL~~~-----------------L~~~~-~~~~~l--~~~~~~~i~~~ia-------------------~gL~yL- 642 (854)
|++|.+|..- ||... .-.... -|.+..++..++. ..+..|
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998654311 11110 001111 1333333333321 122333
Q ss_pred ---HhC-CCCceeccCCCCCCeEEcCC----CcEEEEEecccc
Q 003046 643 ---HTG-CVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSK 677 (854)
Q Consensus 643 ---H~~-~~~~ivHrDIkp~NILl~~~----~~~kL~DFGla~ 677 (854)
... ....++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 221 12378999999999999876 789999998774
No 434
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.33 E-value=0.016 Score=65.41 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=48.0
Q ss_pred ccccccCcEEEEEEEECC-CcEEEEEEEecCCccchhchHHHHHHhhhcCCCce-eeEeeeeeecCeEEEEEEecCCCCH
Q 003046 532 KKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFMHNGTL 609 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~lV~e~~~~gsL 609 (854)
+.|+.|-...+|+....+ +..+++|+..... ...-+...|..+++.+...++ .++++++. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 467888889999998875 4788899874322 112223689999998865445 46777663 2 259999987544
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.22 E-value=0.0088 Score=65.53 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=44.5
Q ss_pred ccccccCcEEEEEEEECC---------CcEEEEEEEecCCccchhchHHHHHHhhhcCCCce-eeEeeeeeecCeEEEEE
Q 003046 532 KKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVY 601 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~---------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~lV~ 601 (854)
+.|+.|....+|+....+ ++.+++|+..... ....+...|.++++.+...++ .++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457788888999998764 2688888865321 112234678888888853343 3566544 2 26899
Q ss_pred EecCCCCH
Q 003046 602 EFMHNGTL 609 (854)
Q Consensus 602 e~~~~gsL 609 (854)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.11 E-value=0.0012 Score=64.09 Aligned_cols=93 Identities=9% Similarity=0.047 Sum_probs=65.3
Q ss_pred cCCcccccCccCcEEeccCCccccc-CCCCCCCCCccEEEcCCcc-cCCCCCccccCC----CCCceeeccccc-ccccc
Q 003046 356 NIPSDLTKLSSLVELWLDGNSLTGP-IPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL----PNLRELYVQNNM-LSGTV 428 (854)
Q Consensus 356 ~lp~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~i 428 (854)
.+|.....--+|+.|||+++.|+.. +..+.+|++|+.|+|+++. |+..--..+..+ ++|+.|+|++|. |+..-
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 3454433335799999999998763 4457899999999999995 764333345554 379999999985 76211
Q ss_pred ccc--cccccccccccCCcccc
Q 003046 429 PSS--LLSKNVVLNYAGNINLH 448 (854)
Q Consensus 429 p~~--l~~~l~~l~~~~n~~~~ 448 (854)
=.. -+++|+.|++++.+...
T Consensus 132 l~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HHHGGGCTTCCEEEEESCTTCC
T ss_pred HHHHhcCCCCCEEECCCCCCCC
Confidence 111 16788999998887654
No 437
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.04 E-value=0.018 Score=62.39 Aligned_cols=68 Identities=12% Similarity=0.193 Sum_probs=44.1
Q ss_pred cccCcEEEEEEEECCCcEEEEEEEecCCccchhchHHHHHHhhhcCC---CceeeEeee------eeecCeEEEEEEecC
Q 003046 535 GSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH---RNLVQFLGY------CQEEGRSVLVYEFMH 605 (854)
Q Consensus 535 G~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~g~------~~~~~~~~lV~e~~~ 605 (854)
|.|....||+....+| .+++|+..... ...|+.+++.+.. |.+.+.+.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYH------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSS------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCcc------chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444679999987766 89999876433 1356666666632 224444432 233567899999999
Q ss_pred CCCH
Q 003046 606 NGTL 609 (854)
Q Consensus 606 ~gsL 609 (854)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.75 E-value=0.0029 Score=62.64 Aligned_cols=57 Identities=14% Similarity=0.129 Sum_probs=28.3
Q ss_pred CeeEEEecCCCCccc----CCcccccCccCcEEeccCCcccccCC-----CCCCCCCccEEEcCCc
Q 003046 342 SITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIP-----DFSGCPDLRIIHLEDN 398 (854)
Q Consensus 342 ~L~~L~Ls~n~l~g~----lp~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~Ls~N 398 (854)
.|+.|+|++|+|... |...+..-+.|+.|+|++|+|...-- .+..-+.|+.|+|++|
T Consensus 71 ~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 71 HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 466666666666522 22223334556666666666653211 1333344556666544
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.37 E-value=0.033 Score=61.51 Aligned_cols=99 Identities=14% Similarity=0.320 Sum_probs=54.4
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
..|+.+.+.++..+ .-...|.++++|+.+.+. +.++.+... |.++.+|+.++|..| ++..-..+|.++.+|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 45666666554433 444456666666666664 345444443 666666666666544 44233445666666666666
Q ss_pred ccccccccccccc---ccccccccccCC
Q 003046 420 QNNMLSGTVPSSL---LSKNVVLNYAGN 444 (854)
Q Consensus 420 ~~N~l~g~ip~~l---~~~l~~l~~~~n 444 (854)
..+ ++ .|.... +.+|+.+.+.+|
T Consensus 342 p~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 342 PSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred Ccc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 433 55 555544 234555555544
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.34 E-value=0.029 Score=61.99 Aligned_cols=80 Identities=19% Similarity=0.152 Sum_probs=56.0
Q ss_pred CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
..+|+.+.+.++ ++..-...|.++++|+.++|.++ ++.+... |.+|++|+.++|..| ++..-..+|.++.+|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 457778877654 66344556778888888888644 6655544 788888888888776 6634456788888888887
Q ss_pred cccc
Q 003046 419 VQNN 422 (854)
Q Consensus 419 l~~N 422 (854)
|..|
T Consensus 373 lp~~ 376 (394)
T 4fs7_A 373 LPKR 376 (394)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 7544
No 441
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.15 E-value=0.07 Score=58.92 Aligned_cols=141 Identities=14% Similarity=0.207 Sum_probs=78.8
Q ss_pred cccccCcEEEEEEEECC--------CcEEEEEEEecCCcc------------c------hhchHHHHHHhhhcCCCc-ee
Q 003046 533 KIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQ------------G------KREFTNEVTLLSRIHHRN-LV 585 (854)
Q Consensus 533 ~iG~G~fg~Vy~~~~~~--------~~~vAvK~l~~~~~~------------~------~~~~~~E~~~l~~l~Hpn-Iv 585 (854)
.|..|-...+|+....+ .+.|.+++.-..... . ......|..+++.+...+ ..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45557778999988753 367888886432210 0 112234888888885333 44
Q ss_pred eEeeeeeecCeEEEEEEecCCCCHHHh-----------------hccc-cccccccc--HHHHHHHHHHHH---------
Q 003046 586 QFLGYCQEEGRSVLVYEFMHNGTLKEH-----------------LYGT-LTHEQRIN--WIKRLEIAEDAA--------- 636 (854)
Q Consensus 586 ~l~g~~~~~~~~~lV~e~~~~gsL~~~-----------------L~~~-~~~~~~l~--~~~~~~i~~~ia--------- 636 (854)
++++++..+ +|+||+++-+|... +|.. ..-..... |....++..++.
T Consensus 139 kl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 677766432 89999986544211 1111 00011111 222222322211
Q ss_pred -------------HHH----HHHHhC-CCCceeccCCCCCCeEEcCC------CcEEEEEecccc
Q 003046 637 -------------KGI----EYLHTG-CVPAIIHRDLKSSNILLDKH------MRAKVSDFGLSK 677 (854)
Q Consensus 637 -------------~gL----~yLH~~-~~~~ivHrDIkp~NILl~~~------~~~kL~DFGla~ 677 (854)
.-+ .+|... ....++|+|+.+.|||++.+ +.+.|+||..|.
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 22378999999999999887 789999998764
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.14 E-value=0.0036 Score=61.95 Aligned_cols=83 Identities=14% Similarity=0.271 Sum_probs=61.5
Q ss_pred CCeeEEEecCC-CCcc----cCCcccccCccCcEEeccCCcccccCC----C-CCCCCCccEEEcCCcccCCC----CCc
Q 003046 341 PSITVIHLSSK-NLTG----NIPSDLTKLSSLVELWLDGNSLTGPIP----D-FSGCPDLRIIHLEDNQLTGP----LPS 406 (854)
Q Consensus 341 ~~L~~L~Ls~n-~l~g----~lp~~~~~l~~L~~L~Ls~N~l~~~~~----~-~~~l~~L~~L~Ls~N~l~g~----~p~ 406 (854)
+.|+.|+|++| +|.. .+-+.+..-+.|+.|+|++|+|...-- + +..-+.|+.|+|+.|+|... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 37999999986 7753 244556667899999999999985322 1 44557899999999999832 334
Q ss_pred cccCCCCCceeeccccc
Q 003046 407 SLMNLPNLRELYVQNNM 423 (854)
Q Consensus 407 ~~~~l~~L~~L~l~~N~ 423 (854)
.+..-+.|+.|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 55666789999998763
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.02 E-value=0.036 Score=61.16 Aligned_cols=83 Identities=22% Similarity=0.263 Sum_probs=65.6
Q ss_pred CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
.++|+.+.+. ++++..-...|.++.+|+.++|..| ++.+... |.+|.+|+.+.|..| ++..-..+|.++++|+.++
T Consensus 287 c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 287 CPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIE 363 (394)
T ss_dssp CTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEE
T ss_pred ccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEE
Confidence 3578899986 5677445568889999999999865 6655554 999999999999765 6634456899999999999
Q ss_pred ccccccc
Q 003046 419 VQNNMLS 425 (854)
Q Consensus 419 l~~N~l~ 425 (854)
+.+|...
T Consensus 364 ~~~~~~~ 370 (394)
T 4gt6_A 364 YSGSRSQ 370 (394)
T ss_dssp ESSCHHH
T ss_pred ECCceee
Confidence 9988654
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.95 E-value=0.052 Score=59.36 Aligned_cols=88 Identities=16% Similarity=0.196 Sum_probs=50.6
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++.+... |.++.+|+.+.+.+|.++..-..+|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 35666666554 44333445666666666666543 4433333 666677777777666666334456666667777666
Q ss_pred ccccccccccccc
Q 003046 420 QNNMLSGTVPSSL 432 (854)
Q Consensus 420 ~~N~l~g~ip~~l 432 (854)
..+ ++ .|....
T Consensus 318 p~~-l~-~I~~~a 328 (379)
T 4h09_A 318 PTA-LK-TIQVYA 328 (379)
T ss_dssp CTT-CC-EECTTT
T ss_pred Ccc-cc-EEHHHH
Confidence 433 55 555544
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.71 E-value=0.077 Score=59.12 Aligned_cols=73 Identities=14% Similarity=0.159 Sum_probs=47.9
Q ss_pred ccccccCcEEEEEEEECC--------CcEEEEEEEecCCccchhchHHHHHHhhhcCCCce-eeEeeeeeecCeEEEEEE
Q 003046 532 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 602 (854)
Q Consensus 532 ~~iG~G~fg~Vy~~~~~~--------~~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~lV~e 602 (854)
+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+...++ .++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 456678888999998763 5789999864322 222345688888888853333 45555332 268999
Q ss_pred ecCCCCH
Q 003046 603 FMHNGTL 609 (854)
Q Consensus 603 ~~~~gsL 609 (854)
|++|.+|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.70 E-value=0.054 Score=59.26 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=70.7
Q ss_pred CCCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceee
Q 003046 340 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 418 (854)
Q Consensus 340 ~~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 418 (854)
..+|+.+.+.++ ++..-...|.++++|+.+.+.+|.++.+.+. |.+|.+|+.+.|..| ++..-..+|.++.+|+.+.
T Consensus 262 ~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 262 CTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred eehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 457888888654 6634455788999999999999999887765 999999999999865 6634456899999999998
Q ss_pred cccccccccccccccc
Q 003046 419 VQNNMLSGTVPSSLLS 434 (854)
Q Consensus 419 l~~N~l~g~ip~~l~~ 434 (854)
+..+ ++ .|....|.
T Consensus 340 ip~~-v~-~I~~~aF~ 353 (379)
T 4h09_A 340 YPKS-IT-LIESGAFE 353 (379)
T ss_dssp CCTT-CC-EECTTTTT
T ss_pred ECCc-cC-EEchhHhh
Confidence 8654 66 66555443
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.37 E-value=0.23 Score=49.56 Aligned_cols=103 Identities=15% Similarity=0.086 Sum_probs=66.0
Q ss_pred CCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCCeEEcCCCcEEEEEecccccccCCCcce
Q 003046 607 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 686 (854)
Q Consensus 607 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 686 (854)
-+|.+.|.. .+..+++.+++.++.|.+.+|.-+-.+..+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---------
Confidence 378888853 367899999999999999998776221001 1222346889999999887753 1110
Q ss_pred eecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcc
Q 003046 687 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEA 729 (854)
Q Consensus 687 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~p 729 (854)
.....+.|||... ...+++.=|||+|+++|.-+-=..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123456888763 4556788999999999998864433
No 448
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.15 E-value=0.1 Score=57.48 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=67.6
Q ss_pred CCeeEEEecCCCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcccCCCCCccccCCCCCceeec
Q 003046 341 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 419 (854)
Q Consensus 341 ~~L~~L~Ls~n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 419 (854)
..++.+.+..+.+ ....|..+.+|+.+.+.+| ++.+... |.++.+|+.++|.++ ++..-..+|.++.+|+.+.|
T Consensus 276 ~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 276 SGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred cccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 4566666665542 2346778889999998765 6655554 888999999999754 66444568889999999988
Q ss_pred cccccccccccccc---cccccccccCC
Q 003046 420 QNNMLSGTVPSSLL---SKNVVLNYAGN 444 (854)
Q Consensus 420 ~~N~l~g~ip~~l~---~~l~~l~~~~n 444 (854)
..| ++ .|+...| .+|+.+.+..+
T Consensus 351 p~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 351 PLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred Ccc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 776 77 7776663 44565555443
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.78 E-value=2.6 Score=46.31 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=24.5
Q ss_pred ceeccCCCCCCeEE------cCCCcEEEEEecccc
Q 003046 649 AIIHRDLKSSNILL------DKHMRAKVSDFGLSK 677 (854)
Q Consensus 649 ~ivHrDIkp~NILl------~~~~~~kL~DFGla~ 677 (854)
.++|+|+.+.|||+ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 46799999999999 456779999998874
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.55 E-value=4.4 Score=40.15 Aligned_cols=117 Identities=9% Similarity=0.120 Sum_probs=78.3
Q ss_pred CCCceeeEeeeeeecCeEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHhCCCCceeccCCCCCC
Q 003046 580 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 659 (854)
Q Consensus 580 ~HpnIv~l~g~~~~~~~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDIkp~N 659 (854)
.||+.+.. .+-..++...+.|+.-+. ...+ ..-+.++...+++++..|+....+++.. +|--++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f-----~~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPF-----DNIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEG-----GGGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCH-----HHHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 67888765 455556665555554332 2221 2234567788899999999988777755 788899999
Q ss_pred eEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCccccc
Q 003046 660 ILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 732 (854)
Q Consensus 660 ILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~~ 732 (854)
++++.++.+++.-.|+...+ +|. ..++..=.-.+=|++..+++++..|+.
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999877764322 222 112222233567888999999988864
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.43 E-value=0.45 Score=53.61 Aligned_cols=59 Identities=5% Similarity=0.022 Sum_probs=17.3
Q ss_pred hccccccCcEEEEEEEECC-CcEEEE------EEEecCC--ccchhchHHHHHHhhhcCCCceeeEeeeee
Q 003046 531 EKKIGSGGFGVVYYGKLKD-GKEIAV------KVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ 592 (854)
Q Consensus 531 ~~~iG~G~fg~Vy~~~~~~-~~~vAv------K~l~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~ 592 (854)
.+.|| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45676 99999999874 367888 6655432 223346788889999999999999888764
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=69.35 E-value=7.4 Score=38.69 Aligned_cols=114 Identities=11% Similarity=0.129 Sum_probs=75.8
Q ss_pred CCCceeeEeeeeeecCeEEEEEEecCCC-CHHHhhcccccccccccHHHHHHHHHHHHHHHH-HHHhCCCCceeccCCCC
Q 003046 580 HHRNLVQFLGYCQEEGRSVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIE-YLHTGCVPAIIHRDLKS 657 (854)
Q Consensus 580 ~HpnIv~l~g~~~~~~~~~lV~e~~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrDIkp 657 (854)
.||.. -..+-.+++...+.++--+++ ++. . -..++...+++++..|+.... +++.. +|--++|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~-------i~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-A-------IRKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-H-------HHTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-H-------HHhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeC
Confidence 67777 334446667777777755333 222 2 234667788888988888776 66654 7888999
Q ss_pred CCeEEcCCCcEEEEEecccccccCCCcceeecccccccccCccccccCcCCCcchhhhHHHHHHHHHhCCcccc
Q 003046 658 SNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 731 (854)
Q Consensus 658 ~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwS~Gvvl~elltG~~pf~ 731 (854)
+||+++.++.++|.-.|+-.. ++|.-+ ++.-=.-.+=|++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCccc------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999987776322 233221 111123356788888999988775
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=61.29 E-value=2.5 Score=30.48 Aligned_cols=12 Identities=33% Similarity=0.318 Sum_probs=5.1
Q ss_pred ceeecchhhHHH
Q 003046 458 NIIIGSSVGAAV 469 (854)
Q Consensus 458 ~iii~~~vg~~~ 469 (854)
..|++.++++++
T Consensus 11 ~~IA~gVVgGv~ 22 (44)
T 2ks1_B 11 PSIATGMVGALL 22 (44)
T ss_dssp SSSTHHHHHHHH
T ss_pred ceEEeehhHHHH
Confidence 334444444333
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=54.06 E-value=3.1 Score=29.97 Aligned_cols=12 Identities=17% Similarity=0.495 Sum_probs=5.3
Q ss_pred eeecchhhHHHH
Q 003046 459 IIIGSSVGAAVL 470 (854)
Q Consensus 459 iii~~~vg~~~l 470 (854)
.|++.+++++++
T Consensus 11 aIA~gVVgGv~~ 22 (44)
T 2l2t_A 11 LIAAGVIGGLFI 22 (44)
T ss_dssp HHHHHHHHHHHH
T ss_pred eEEEeehHHHHH
Confidence 344444543333
No 455
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=54.00 E-value=2.2 Score=30.66 Aligned_cols=14 Identities=29% Similarity=0.491 Sum_probs=6.9
Q ss_pred ceeecchhhHHHHH
Q 003046 458 NIIIGSSVGAAVLL 471 (854)
Q Consensus 458 ~iii~~~vg~~~ll 471 (854)
..+++.++|+++++
T Consensus 12 ~~Ia~~vVGvll~v 25 (44)
T 2jwa_A 12 TSIISAVVGILLVV 25 (44)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHH
Confidence 34555566644333
No 456
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=37.02 E-value=12 Score=22.45 Aligned_cols=16 Identities=31% Similarity=0.846 Sum_probs=13.9
Q ss_pred CCccCCCCCCCCcccc
Q 003046 130 APVRYPDDPFDRIWES 145 (854)
Q Consensus 130 ~~iryp~D~~dR~W~~ 145 (854)
...|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 4679999999999985
No 457
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=35.11 E-value=14 Score=22.34 Aligned_cols=16 Identities=31% Similarity=0.846 Sum_probs=14.0
Q ss_pred CCccCCCCCCCCcccc
Q 003046 130 APVRYPDDPFDRIWES 145 (854)
Q Consensus 130 ~~iryp~D~~dR~W~~ 145 (854)
...|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (27)
T 1nro_R 6 FLLRNPNDKYEPFWED 21 (27)
T ss_pred ccccCCCcccCccccc
Confidence 4679999999999986
No 458
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=26.49 E-value=3.6e+02 Score=24.29 Aligned_cols=88 Identities=13% Similarity=0.110 Sum_probs=54.5
Q ss_pred eeeecccCCceeEEeEEeeecCcCCCCCCCeeEEEeCCceeeeEEecC-CC---CceEEEEEEEecCCCceEEEec-CCC
Q 003046 14 CYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHWSTIVISD-AA---TIEVRELIFLASSPKIDVCLSN-ATT 88 (854)
Q Consensus 14 cy~~~~~~~~~y~~r~~~~~g~~d~~~~~p~fd~~~~~~~w~~v~~~~-~~---~~~~~e~~~~~~~~~~~vcl~~-~~~ 88 (854)
-|++.+.+.|.|.|+..|.=|.. ..-.++|+|+|+.-.+|.... .+ .....--|.+..+. -.+=|.. .+.
T Consensus 42 ~~~V~v~~aG~Y~l~~ryang~~----~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~-ntI~l~~~~~~ 116 (145)
T 2w3j_A 42 VWSLSAASAKTYTAQIRFGNGGT----SARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGT-NSIKLVAETAD 116 (145)
T ss_dssp EEEEEESSCEEEEEEEEEECCSS----SCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEE-EEEEEEECSTT
T ss_pred EEEEECCCCeEEEEEEEEECCCC----CCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCc-eEEEEEEecCc
Confidence 57787777899999887753332 235789999998777776532 11 12221133333333 3444544 345
Q ss_pred CCceeeeeeeeecCCccc
Q 003046 89 GQPFISTLELRQFNGSVY 106 (854)
Q Consensus 89 ~~pfis~le~~~l~~~~y 106 (854)
|-|-|-.|+|.+.+....
T Consensus 117 g~~niD~i~v~~~~~~~~ 134 (145)
T 2w3j_A 117 GLANIDSIRVTGNGITPA 134 (145)
T ss_dssp CCCEEEEEEECSTTEEEC
T ss_pred CCEEEEEEEEEcCCCCCC
Confidence 779999999987665544
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.39 E-value=80 Score=26.80 Aligned_cols=37 Identities=19% Similarity=0.262 Sum_probs=20.6
Q ss_pred CCCCCCccEEEcCCcccCCCCCccccCCCCCceeeccc
Q 003046 384 FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 421 (854)
Q Consensus 384 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 421 (854)
|.++++|+.+.|-.+ ++..-..+|.++.+|+.+.+..
T Consensus 16 F~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 16 FAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred hcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 556666666666544 2323344566666666665543
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.58 E-value=1.3e+02 Score=25.38 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=34.5
Q ss_pred CCCcccCCcccccCccCcEEeccCCcccccCCC-CCCCCCccEEEcCCcc
Q 003046 351 KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 399 (854)
Q Consensus 351 n~l~g~lp~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~ 399 (854)
..++..-...|.++++|+.+.|..+ ++.+-.. |.+|.+|+.+.|....
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 3455444567888999999999875 4444443 8999999999987653
No 461
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=22.99 E-value=18 Score=25.27 Aligned_cols=11 Identities=45% Similarity=0.570 Sum_probs=4.1
Q ss_pred ecchhhHHHHH
Q 003046 461 IGSSVGAAVLL 471 (854)
Q Consensus 461 i~~~vg~~~ll 471 (854)
++.++++++++
T Consensus 16 ~~~vv~Gv~ll 26 (41)
T 2k9y_A 16 IGGVAVGVVLL 26 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EeehhHHHHHH
Confidence 33333333333
No 462
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=22.03 E-value=3.2e+02 Score=28.73 Aligned_cols=77 Identities=12% Similarity=0.101 Sum_probs=42.3
Q ss_pred eEEEEEEecCCCCHHHhhcccccccccccHHHHHHHHHHH--HHHHHHHHhCCC-Cceec-cCCCCCCeEEcCCCc-EEE
Q 003046 596 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDA--AKGIEYLHTGCV-PAIIH-RDLKSSNILLDKHMR-AKV 670 (854)
Q Consensus 596 ~~~lV~e~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~i--a~gL~yLH~~~~-~~ivH-rDIkp~NILl~~~~~-~kL 670 (854)
..+++|||.+|..|.+.-.... ...+... .+.++ .-++..+..+.. .+.+. .--.++|||++.+.. +.+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~--~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ 229 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA--PEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVP 229 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH--HHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEE
T ss_pred cceehhhhcCCCccccchhhhh--hhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEE
Confidence 5679999998766544221100 0112222 22222 234555555433 22222 235789999987655 888
Q ss_pred EEeccccc
Q 003046 671 SDFGLSKF 678 (854)
Q Consensus 671 ~DFGla~~ 678 (854)
+|-+++..
T Consensus 230 IDhn~af~ 237 (342)
T 1cja_A 230 IDSKIIPL 237 (342)
T ss_dssp CSCCCCCC
T ss_pred EcCCcccc
Confidence 99988753
No 463
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=20.36 E-value=21 Score=24.82 Aligned_cols=10 Identities=20% Similarity=0.215 Sum_probs=4.2
Q ss_pred eeecchhhHH
Q 003046 459 IIIGSSVGAA 468 (854)
Q Consensus 459 iii~~~vg~~ 468 (854)
.+.++++|.+
T Consensus 12 aIAGiVvG~v 21 (38)
T 2k1k_A 12 EIVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHHH
T ss_pred ceeeeehHHH
Confidence 3344444433
Done!