Your job contains 1 sequence.
>003047
MDSRDSTQSTAAGNTSGEDDSGVLSVTATLAKEAALYFQSRKFDECLDLLKQLLDKKPDD
PKILHNIAIAEYFRDGCTDPKKLLEALNNVKNKSEELARATGEQTEGGGNIGSKVGLGSK
GSGVVGNQVSAANSGSLVYMDEFDVSVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPID
ETTALQICLLLLDVALACHDAFRSADVLIYLEKAFSVGCVNQVDSGSMGQQSTNLLAKYS
SVPSNSSTADASNSDLAATVNASENALSRTLSEETLEDDTVLALSSLEISGQNLTRPVGL
SSNELSRTLVDRSISTVDLKLKLQLYKVRFLLLTRNLKHAKREVKLAMNIARGKDSSLAL
FLKSQLEYARRNHRKAIKLLLALSNRTEMGISSMFNNNLGCIYYQLAKYHTSSVFLSKAL
SNSASLRKDKPLKLLTFSQDKSLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLW
LRLAECCLMALEKGLVAPGRSLSDGSEVKVHVIGKGKWRYLVMEDGFRKNGHVDSPEKDD
SSLGSDGQPKLSMPLARQCLLNALHLLNYPDLNYSKFGLPSNSSVEESESSEGASSKNLN
HKSLSSLDSKISVGLGQVTANGDAKDQKGGTSLEVIQNSLSYYEDVCRRENQMIKQALLA
NLAYVELEMENPVKALAAARSLLELPDCSRIYIFLGHIYAAEALCLLNRPKEAAEHFSMY
LSGGDNFDLPFSGEDCEQWRVEKIIDCEELNGGPAAAKNPSPEDSRDTMFPKPEEARGTL
YVNIAAMFAMQGEFERAHHFVTQALSILPRSTEATLTAIYVDLMLGKSQEALAKLKYCNH
VRFLPSGLQLSKSC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003047
(854 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169503 - symbol:AT5G35430 "AT5G35430" species... 1093 1.0e-203 3
MGI|MGI:1926143 - symbol:Cnot10 "CCR4-NOT transcription c... 197 3.5e-40 4
RGD|1359219 - symbol:Cnot10 "CCR4-NOT transcription compl... 198 5.5e-40 4
UNIPROTKB|Q9H9A5 - symbol:CNOT10 "CCR4-NOT transcription ... 202 1.3e-39 4
UNIPROTKB|Q5ZIW2 - symbol:CNOT10 "CCR4-NOT transcription ... 199 4.6e-39 4
ZFIN|ZDB-GENE-060929-368 - symbol:cnot10 "CCR4-NOT transc... 212 5.1e-33 3
FB|FBgn0260444 - symbol:CG18616 species:7227 "Drosophila ... 175 1.4e-25 5
DICTYBASE|DDB_G0281363 - symbol:DDB_G0281363 "putative CC... 156 3.5e-18 6
>TAIR|locus:2169503 [details] [associations]
symbol:AT5G35430 "AT5G35430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0006007 "glucose catabolic
process" evidence=RCA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50293 SMART:SM00028 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 eggNOG:NOG256461
KO:K12607 OMA:VVRYNLA EMBL:AY057505 EMBL:AY103308 EMBL:AK175967
IPI:IPI00544788 RefSeq:NP_198393.2 UniGene:At.6875
ProteinModelPortal:Q93ZI7 SMR:Q93ZI7 IntAct:Q93ZI7 STRING:Q93ZI7
PaxDb:Q93ZI7 PRIDE:Q93ZI7 EnsemblPlants:AT5G35430.1 GeneID:833507
KEGG:ath:AT5G35430 TAIR:At5g35430 HOGENOM:HOG000030806
InParanoid:Q93ZI7 PhylomeDB:Q93ZI7 ProtClustDB:CLSN2680349
ArrayExpress:Q93ZI7 Genevestigator:Q93ZI7 Uniprot:Q93ZI7
Length = 786
Score = 1093 (389.8 bits), Expect = 1.0e-203, Sum P(3) = 1.0e-203
Identities = 244/456 (53%), Positives = 310/456 (67%)
Query: 127 NQVSAANSGSLVYM--DEFDVSVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTA 184
+QV AAN G+ V + D FD +V LNIAV WFHL+ Y+K+ S+LEPL+QNI+ +DET A
Sbjct: 104 DQVEAANPGTNVSVSKDHFDRTVTTLNIAVTWFHLYHYSKSFSILEPLFQNIQRLDETIA 163
Query: 185 LQICLLLLDVALACHDAFRSADVLIYLEKAFSVGCVNQVDSGSMGQQSTNLLAKYSSVPX 244
LQIC LLLD++LAC DA V Y++KAF VG + ++GS Q S+N +++ SS+
Sbjct: 164 LQICFLLLDISLACRDAVNFLAVFDYMDKAFGVGFGSHEENGSTMQLSSNQVSRTSSL-- 221
Query: 245 XXXXXXXXXXXXXXXVNASENALSRTLSEETLEDDTVLALSSLEISGQNLTRPVG-LSSN 303
+ A+E++L EETL+ + VLA EI + + VG + +N
Sbjct: 222 --LSSSVASDTLRSDLTAAESSLC----EETLDYENVLA----EIEAEKRMKLVGHIPAN 271
Query: 304 ELSRTLVDRSISTVDLKLKLQLYKVRFLLLTRNLKHAKREVKLAMNIARGKDSSLALFLK 363
L +TL +RS ST DLKL+LQLYKVRFLLLTRNLK AKREVK AMNIA+ +DSS+AL LK
Sbjct: 272 NLLKTLSERSFSTADLKLELQLYKVRFLLLTRNLKLAKREVKHAMNIAQKRDSSMALLLK 331
Query: 364 SQLEYARRNHRKAIKLLLALSNRTEMGISSMFNNNLGCIYYQLAKYHTSSVFLSKALSNS 423
SQLEYA NH KA+KLLL E G S +FNNNLGCI+YQL Y SSV KAL +
Sbjct: 332 SQLEYAHGNHPKAMKLLLVSGIHKEAGTSGIFNNNLGCIFYQLGCYQASSVLFLKALRSC 391
Query: 424 ASLRKDKPLKLLTFSQDKSLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLWLRL 483
+SLR KP K + SQ+KS+LITYNCGL YLA GKP+LAA+CFQK+S VF +QPL+WLRL
Sbjct: 392 SSLRNGKPAKTFSLSQNKSMLITYNCGLLYLASGKPLLAAQCFQKASHVFRRQPLIWLRL 451
Query: 484 AECCLMALEKGLVAPGRSLSDGSEVKVHVIGKGKWRYLVMEDGFRKNGHVDSPEKDDSSL 543
AECC+MAL+KGL+ G S D SE++VHVIGKG R L++E+ NG+V+
Sbjct: 452 AECCMMALQKGLLEGGNSSLDRSEIRVHVIGKGNRRQLMIEE----NGYVELA------- 500
Query: 544 GSDGQPKLSMPLARQCLLNALHLLNYPDLNYSKFGL 579
GS+ KLS+PLAR CL N ++LLN N SK L
Sbjct: 501 GSNQLSKLSLPLARVCLSNGIYLLNESLSNDSKSDL 536
Score = 678 (243.7 bits), Expect = 1.0e-203, Sum P(3) = 1.0e-203
Identities = 130/233 (55%), Positives = 174/233 (74%)
Query: 621 NGDAKDQKGGTSLEVIQNSLSYYEDVCRRENQMIKQALLANLAYVELEMENPVKALAAAR 680
N D+K+ KGG S E+IQNSLS +ED+ RE Q+++QAL AN+AYVELE+ NP+KAL+AA
Sbjct: 561 NTDSKEAKGGMSQEIIQNSLSAFEDIRNREKQLMRQALFANMAYVELELANPIKALSAAT 620
Query: 681 SLLELPDCSRIYIFLGHIYAAEALCLLNRPKEAAEHFSMYLSGGDNFDLPFSGEDCEQWR 740
SLL+L DCS+IY+FLGHIYAAEALCLLNRP EA H S YL G D+F LP++ ED +QW
Sbjct: 621 SLLQLADCSKIYVFLGHIYAAEALCLLNRPIEAGAHLSAYLLGQDDFKLPYAQEDFDQWW 680
Query: 741 VEKIIDCEELNGGPAAAKNPSPEDSRDTMFPKPEEARGTLYVNIAAMFAMQGEFERAHHF 800
DCEE +PS ++RD++F KPEEARG L+ ++AA+ A QG ++A
Sbjct: 681 KHTSSDCEE-------TLDPSTGNTRDSVFLKPEEARGALFADLAALLATQGHHDQAKSL 733
Query: 801 VTQALSILPRSTEATLTAIYVDLMLGKSQEALAKLKYCNHVRFLPSGLQLSKS 853
+T AL++LP + +AT+TA+Y+DLMLG+SQ+ALA+LK C HV F+P L++ S
Sbjct: 734 ITHALTLLPNNVQATVTAVYIDLMLGRSQDALARLKQCTHVSFVPGRLEVRAS 786
Score = 239 (89.2 bits), Expect = 1.0e-203, Sum P(3) = 1.0e-203
Identities = 52/107 (48%), Positives = 66/107 (61%)
Query: 1 MDSRDSTQSTAAGNTSG-EDDSGVLSVTATLAKEAALYFQSRKFDECXXXXXXXXXXXXX 59
MDSRDS S A + S DD+ VLSVT+TLAK A YFQS KF+EC
Sbjct: 1 MDSRDSLSSDAVRDASSLSDDAAVLSVTSTLAKTALSYFQSGKFEECIDVLIQLDQMKHN 60
Query: 60 XXXXXHNIAIAEYFRDGCTDPKKLLEALNNVKNKSEELARATGEQTE 106
HN+AIAEYF+DGC++ +KL+E L VK +SE+L+ A +Q E
Sbjct: 61 DPKVLHNMAIAEYFKDGCSNSEKLVEVLKRVKKQSEQLSSAAKDQVE 107
Score = 42 (19.8 bits), Expect = 5.4e-93, Sum P(3) = 5.4e-93
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 271 LSEETLEDDTVLALSSLEISGQNLTRPVGLSSNELSRTLVD 311
L E+L +D+ L S+ G N T+ S +E T D
Sbjct: 523 LLNESLSNDSKSDLGSILSVGMNETKEGSSSDHEEGNTNTD 563
>MGI|MGI:1926143 [details] [associations]
symbol:Cnot10 "CCR4-NOT transcription complex, subunit 10"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0030014 "CCR4-NOT complex" evidence=ISO] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR019734 Pfam:PF00515 SMART:SM00028
MGI:MGI:1926143 Gene3D:1.25.40.10 CTD:25904 eggNOG:NOG256461
GeneTree:ENSGT00390000001827 HOGENOM:HOG000111843
HOVERGEN:HBG077464 KO:K12607 OMA:MIHPKEI OrthoDB:EOG4CG07N
ChiTaRS:CNOT10 EMBL:AK029103 EMBL:AK149944 EMBL:AK161842
EMBL:BC025554 EMBL:BC036179 EMBL:BC039183 EMBL:BC047204
IPI:IPI00221683 IPI:IPI00880460 IPI:IPI00880595 IPI:IPI00880686
IPI:IPI00880836 IPI:IPI00880946 RefSeq:NP_705813.2
UniGene:Mm.283708 UniGene:Mm.486302 ProteinModelPortal:Q8BH15
SMR:Q8BH15 STRING:Q8BH15 PhosphoSite:Q8BH15 PaxDb:Q8BH15
PRIDE:Q8BH15 Ensembl:ENSMUST00000070117 GeneID:78893 KEGG:mmu:78893
UCSC:uc009rxq.2 UCSC:uc009rxr.2 UCSC:uc009rxs.2 UCSC:uc009rxu.2
UCSC:uc009rxv.2 InParanoid:Q8BH15 NextBio:349690 Bgee:Q8BH15
CleanEx:MM_CNOT10 Genevestigator:Q8BH15 Uniprot:Q8BH15
Length = 744
Score = 197 (74.4 bits), Expect = 3.5e-40, Sum P(4) = 3.5e-40
Identities = 56/186 (30%), Positives = 89/186 (47%)
Query: 394 MFNNNLGCIYYQLAKYHTSSVFLSKALSNS----ASL--------RKDKPLKLLTFSQDK 441
MF NNLGCI++ ++K++ + KAL + A L +K + T +K
Sbjct: 294 MFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGGTDPGKKFSGRPMCTLLTNK 353
Query: 442 SLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLWLRLAECCLMALEKGLVAPGRS 501
+ YNCG+Q L G+P+ A C ++ V++ P LWLRLAECC+ A + +
Sbjct: 354 RYELLYNCGIQLLHVGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKG 413
Query: 502 LSDGSEVKVHVIGKGKWRYLVMEDGFRKNGHVDSPEKDDSSLGSDGQPKLSMPLARQCLL 561
L + ++G+G R +V+ + + + +D S P S+ A CL
Sbjct: 414 LPTKKGIVQSIVGQGYHRKIVLA-----SQSIQNTVYNDGQ--SSAIPVASVEFAAICLR 466
Query: 562 NALHLL 567
NAL LL
Sbjct: 467 NALLLL 472
Score = 185 (70.2 bits), Expect = 7.8e-39, Sum P(4) = 7.8e-39
Identities = 53/142 (37%), Positives = 80/142 (56%)
Query: 291 GQNLTRPVGLSSNELSRTLVDRSISTVDL-KLKLQLYKVRFLLLTRNLKHAKREVKLAMN 349
G+N G +S++ S + ++ K K+ YKVR + ++LK KRE+K MN
Sbjct: 185 GKNGKNETGNNSSKDGSNPKAESAALIEAAKSKIHQYKVRGYIQMKSLKACKREIKSVMN 244
Query: 350 IARGKDSSLALFLKSQLEYARRNHRKAIKLLLALSNRTE------MG--ISSMFNNNLGC 401
A G +S+ +LFLKS EY R N+RKA+KLL + SN E G + MF NNLGC
Sbjct: 245 TA-G-NSAPSLFLKSNFEYLRGNYRKAVKLLNS-SNIAEHPGFMKTGECLRCMFWNNLGC 301
Query: 402 IYYQLAKYHTSSVFLSKALSNS 423
I++ ++K++ + KAL +
Sbjct: 302 IHFAMSKHNLGIFYFKKALQEN 323
Score = 176 (67.0 bits), Expect = 3.5e-40, Sum P(4) = 3.5e-40
Identities = 58/192 (30%), Positives = 97/192 (50%)
Query: 648 RRENQMIKQALLANLAYVELEMENPVKALAAARSLLELPDCSRIYIFLGHIYAAEALCLL 707
++E + +K ++LA AYV L + + + AL A LL+ P S FLGH+YAAEAL L
Sbjct: 525 KQELENLKCSILACSAYVALALGDNLMALNHADQLLQQPKLSGSLKFLGHLYAAEALISL 584
Query: 708 NRPKEAAEHFSMYLSGGDNFDLPFSGEDCEQWRVEKIIDCEELNGGPAAAKNPSPEDSRD 767
+R +A H + + L S + +Q + + E +G A PS +S
Sbjct: 585 DRISDAITHLNP--ENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNS-- 640
Query: 768 TMFPKPEEARGTLYVNIAAMFAMQGEFERAHHFVTQALSIL-PRST--EATLTAIYVDLM 824
AR + N+ + + ++ E+++A + QA S++ P+ EA L A+Y++L
Sbjct: 641 --------ARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQ 692
Query: 825 LGKSQEALAKLK 836
G +Q AL +K
Sbjct: 693 NGNTQLALQMIK 704
Score = 161 (61.7 bits), Expect = 3.5e-40, Sum P(4) = 3.5e-40
Identities = 39/107 (36%), Positives = 59/107 (55%)
Query: 127 NQVSAANSGSLVYMDEFDVSVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALQ 186
NQV +A + +D+ + S+ N AVI +HL +Y +A+SV E LYQ IEP +E A
Sbjct: 92 NQVHSAVE-EMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQA 150
Query: 187 ICLLLLDVALACHDAFRSADVLIYLEKAFSVGCVNQVDSGSMGQQST 233
+C LL+D+ + H A ++ +L LEK S G + G S+
Sbjct: 151 VCFLLVDLYILTHQAEKALHLLAVLEKMISQGSGGKNGKNETGNNSS 197
Score = 73 (30.8 bits), Expect = 3.5e-40, Sum P(4) = 3.5e-40
Identities = 20/73 (27%), Positives = 29/73 (39%)
Query: 21 SGVLSVTATLAKEAALYFQSRKFDECXXXXXXXXXXXXXXXXXXHNIAIAEYFRDGCTDP 80
SGV L+ A F S +D C N A+AE+F++ T
Sbjct: 21 SGVTDQEKELSASALQAFTSGNYDACLQHLACLQDINKDDYKIILNTAVAEFFKNNQTTT 80
Query: 81 KKLLEALNNVKNK 93
L + LN +KN+
Sbjct: 81 DNLRQTLNQLKNQ 93
>RGD|1359219 [details] [associations]
symbol:Cnot10 "CCR4-NOT transcription complex, subunit 10"
species:10116 "Rattus norvegicus" [GO:0030014 "CCR4-NOT complex"
evidence=ISO] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF00515 SMART:SM00028 RGD:1359219
Gene3D:1.25.40.10 CTD:25904 eggNOG:NOG256461
GeneTree:ENSGT00390000001827 HOGENOM:HOG000111843
HOVERGEN:HBG077464 KO:K12607 OrthoDB:EOG4CG07N EMBL:BC083782
IPI:IPI00371326 RefSeq:NP_001007004.1 UniGene:Rn.23825
ProteinModelPortal:Q5XIA4 STRING:Q5XIA4 PRIDE:Q5XIA4
Ensembl:ENSRNOT00000013815 GeneID:316034 KEGG:rno:316034
UCSC:RGD:1359219 InParanoid:Q5XIA4 NextBio:670333
ArrayExpress:Q5XIA4 Genevestigator:Q5XIA4 Uniprot:Q5XIA4
Length = 744
Score = 198 (74.8 bits), Expect = 5.5e-40, Sum P(4) = 5.5e-40
Identities = 56/186 (30%), Positives = 89/186 (47%)
Query: 394 MFNNNLGCIYYQLAKYHTSSVFLSKALSNS----ASL--------RKDKPLKLLTFSQDK 441
MF NNLGCI++ ++K++ + KAL + A L +K + T +K
Sbjct: 294 MFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGNTDPGKKFSGRPMCTLLANK 353
Query: 442 SLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLWLRLAECCLMALEKGLVAPGRS 501
+ YNCG+Q L G+P+ A C ++ V++ P LWLRLAECC+ A + +
Sbjct: 354 RYELLYNCGIQLLHVGRPLAAFECLVEAVQVYHANPRLWLRLAECCIAANKGTSEQETKG 413
Query: 502 LSDGSEVKVHVIGKGKWRYLVMEDGFRKNGHVDSPEKDDSSLGSDGQPKLSMPLARQCLL 561
L + ++G+G R +V+ + + + +D S P S+ A CL
Sbjct: 414 LPTKKGIVQSIVGQGYHRKIVLA-----SQSIQNTVYNDGQ--SSAIPVASVEFAAICLR 466
Query: 562 NALHLL 567
NAL LL
Sbjct: 467 NALLLL 472
Score = 182 (69.1 bits), Expect = 3.4e-38, Sum P(4) = 3.4e-38
Identities = 48/112 (42%), Positives = 68/112 (60%)
Query: 320 KLKLQLYKVRFLLLTRNLKHAKREVKLAMNIARGKDSSLALFLKSQLEYARRNHRKAIKL 379
K K+ YKVR + ++LK KRE+K MN A G +S+ +LFLKS EY R N+RKA+KL
Sbjct: 215 KSKIHQYKVRGYIQMKSLKACKREIKSVMNTA-G-NSAPSLFLKSNFEYLRGNYRKAVKL 272
Query: 380 LLALSNRTE------MG--ISSMFNNNLGCIYYQLAKYHTSSVFLSKALSNS 423
L + SN E G + MF NNLGCI++ ++K++ + KAL +
Sbjct: 273 LNS-SNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQEN 323
Score = 176 (67.0 bits), Expect = 5.5e-40, Sum P(4) = 5.5e-40
Identities = 58/192 (30%), Positives = 97/192 (50%)
Query: 648 RRENQMIKQALLANLAYVELEMENPVKALAAARSLLELPDCSRIYIFLGHIYAAEALCLL 707
++E + +K ++LA AYV L + + + AL A LL+ P S FLGH+YAAEAL L
Sbjct: 525 KQELENLKCSILACSAYVALALGDNLMALNHADQLLQQPKLSGSLKFLGHLYAAEALISL 584
Query: 708 NRPKEAAEHFSMYLSGGDNFDLPFSGEDCEQWRVEKIIDCEELNGGPAAAKNPSPEDSRD 767
+R +A H + + L S + +Q + + E +G A PS +S
Sbjct: 585 DRISDAITHLNP--ENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNS-- 640
Query: 768 TMFPKPEEARGTLYVNIAAMFAMQGEFERAHHFVTQALSIL-PRST--EATLTAIYVDLM 824
AR + N+ + + ++ E+++A + QA S++ P+ EA L A+Y++L
Sbjct: 641 --------ARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQ 692
Query: 825 LGKSQEALAKLK 836
G +Q AL +K
Sbjct: 693 NGNTQLALQMIK 704
Score = 159 (61.0 bits), Expect = 5.5e-40, Sum P(4) = 5.5e-40
Identities = 38/107 (35%), Positives = 60/107 (56%)
Query: 127 NQVSAANSGSLVYMDEFDVSVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALQ 186
NQV +A + +D+ + S+ N AVI +HL ++ +A++V E LYQ IEP +E A
Sbjct: 92 NQVHSAVE-EMDGLDDVENSMLYYNQAVILYHLRQHTEAIAVGEKLYQFIEPFEEKFAQA 150
Query: 187 ICLLLLDVALACHDAFRSADVLIYLEKAFSVGCVNQVDSGSMGQQST 233
+C LL+D+ + H A ++ +L LEK S G N+ G S+
Sbjct: 151 VCFLLVDLYILTHQAEKALHLLAVLEKMISQGSGNKNGKSETGNNSS 197
Score = 72 (30.4 bits), Expect = 5.5e-40, Sum P(4) = 5.5e-40
Identities = 20/73 (27%), Positives = 29/73 (39%)
Query: 21 SGVLSVTATLAKEAALYFQSRKFDECXXXXXXXXXXXXXXXXXXHNIAIAEYFRDGCTDP 80
SGV L+ A F S +D C N A+AE+F++ T
Sbjct: 21 SGVTDQEKELSTSAFQAFTSGNYDACLQHLACLQDINKDDYKIILNTAVAEFFKNNQTTT 80
Query: 81 KKLLEALNNVKNK 93
L + LN +KN+
Sbjct: 81 DNLRQTLNQLKNQ 93
>UNIPROTKB|Q9H9A5 [details] [associations]
symbol:CNOT10 "CCR4-NOT transcription complex subunit 10"
species:9606 "Homo sapiens" [GO:0030014 "CCR4-NOT complex"
evidence=IDA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF00515 SMART:SM00028 GO:GO:0005829
EMBL:CH471055 Gene3D:1.25.40.10 GO:GO:0000289 CTD:25904
eggNOG:NOG256461 HOVERGEN:HBG077464 KO:K12607 OrthoDB:EOG4CG07N
EMBL:AK021695 EMBL:AK022576 EMBL:AK022952 EMBL:AK023227
EMBL:AK027026 EMBL:AK302196 EMBL:AC138972 EMBL:AC139452
EMBL:BC002928 EMBL:BC002931 EMBL:AL117639 IPI:IPI00396314
IPI:IPI00790411 IPI:IPI00791933 IPI:IPI00794753 IPI:IPI00878368
IPI:IPI01014565 RefSeq:NP_001243670.1 RefSeq:NP_001243671.1
RefSeq:NP_056257.1 UniGene:Hs.444851 ProteinModelPortal:Q9H9A5
SMR:Q9H9A5 DIP:DIP-46839N IntAct:Q9H9A5 STRING:Q9H9A5
PhosphoSite:Q9H9A5 DMDM:74733982 PaxDb:Q9H9A5 PRIDE:Q9H9A5
DNASU:25904 Ensembl:ENST00000328834 Ensembl:ENST00000331889
Ensembl:ENST00000454516 GeneID:25904 KEGG:hsa:25904 UCSC:uc003cfc.1
UCSC:uc003cfd.1 UCSC:uc003cfe.1 GeneCards:GC03P032701
HGNC:HGNC:23817 HPA:HPA035614 neXtProt:NX_Q9H9A5
PharmGKB:PA134862503 InParanoid:Q9H9A5 PhylomeDB:Q9H9A5
ChiTaRS:CNOT10 GenomeRNAi:25904 NextBio:47378 ArrayExpress:Q9H9A5
Bgee:Q9H9A5 CleanEx:HS_CNOT10 Genevestigator:Q9H9A5 Uniprot:Q9H9A5
Length = 744
Score = 202 (76.2 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 57/186 (30%), Positives = 89/186 (47%)
Query: 394 MFNNNLGCIYYQLAKYHTSSVFLSKALSNS----ASL--------RKDKPLKLLTFSQDK 441
MF NNLGCI++ ++K++ + KAL + A L +K + T +K
Sbjct: 294 MFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNK 353
Query: 442 SLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLWLRLAECCLMALEKGLVAPGRS 501
+ YNCG+Q L G+P+ A C ++ V++ P LWLRLAECC+ A + +
Sbjct: 354 RYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKG 413
Query: 502 LSDGSEVKVHVIGKGKWRYLVMEDGFRKNGHVDSPEKDDSSLGSDGQPKLSMPLARQCLL 561
L + ++G+G R +V+ + + + +D S P SM A CL
Sbjct: 414 LPSKKGIVQSIVGQGYHRKIVLA-----SQSIQNTVYNDGQ--SSAIPVASMEFAAICLR 466
Query: 562 NALHLL 567
NAL LL
Sbjct: 467 NALLLL 472
Score = 183 (69.5 bits), Expect = 1.8e-37, Sum P(4) = 1.8e-37
Identities = 48/112 (42%), Positives = 68/112 (60%)
Query: 320 KLKLQLYKVRFLLLTRNLKHAKREVKLAMNIARGKDSSLALFLKSQLEYARRNHRKAIKL 379
K K+ YKVR + ++LK KRE+K MN A G +S+ +LFLKS EY R N+RKA+KL
Sbjct: 215 KSKIHQYKVRAYIQMKSLKACKREIKSVMNTA-G-NSAPSLFLKSNFEYLRGNYRKAVKL 272
Query: 380 LLALSNRTE------MG--ISSMFNNNLGCIYYQLAKYHTSSVFLSKALSNS 423
L + SN E G + MF NNLGCI++ ++K++ + KAL +
Sbjct: 273 LNS-SNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQEN 323
Score = 174 (66.3 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 58/192 (30%), Positives = 97/192 (50%)
Query: 648 RRENQMIKQALLANLAYVELEMENPVKALAAARSLLELPDCSRIYIFLGHIYAAEALCLL 707
++E + +K ++LA AYV L + + + AL A LL+ P S FLGH+YAAEAL L
Sbjct: 525 KQELENLKCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISL 584
Query: 708 NRPKEAAEHFSMYLSGGDNFDLPFSGEDCEQWRVEKIIDCEELNGGPAAAKNPSPEDSRD 767
+R +A H + + L S + +Q + + E +G A PS +S
Sbjct: 585 DRISDAITHLNP--ENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNS-- 640
Query: 768 TMFPKPEEARGTLYVNIAAMFAMQGEFERAHHFVTQALSIL-PRST--EATLTAIYVDLM 824
AR + N+ + + ++ E+++A + QA S++ P+ EA L A+Y++L
Sbjct: 641 --------ARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQ 692
Query: 825 LGKSQEALAKLK 836
G +Q AL +K
Sbjct: 693 NGNTQLALQIIK 704
Score = 155 (59.6 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 127 NQVSAANSGSLVYMDEFDVSVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALQ 186
NQV +A + +D+ + S+ N AVI +HL +Y +A+SV E LYQ IEP +E A
Sbjct: 92 NQVHSAVE-EMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQA 150
Query: 187 ICLLLLDVALACHDAFRSADVLIYLEKAFSVGCVNQVDSGSMGQQS 232
+C LL+D+ + + A ++ +L LEK S G N+ G +
Sbjct: 151 VCFLLVDLYILTYQAEKALHLLAVLEKMISQGNNNKNGKNETGNNN 196
Score = 70 (29.7 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 19/73 (26%), Positives = 28/73 (38%)
Query: 21 SGVLSVTATLAKEAALYFQSRKFDECXXXXXXXXXXXXXXXXXXHNIAIAEYFRDGCTDP 80
SG+ L+ A F S +D C N A+AE+F+ T
Sbjct: 21 SGITDQEKELSTNAFQAFTSGNYDACLQHLACLQDINKDDYKIILNTAVAEFFKSNQTTT 80
Query: 81 KKLLEALNNVKNK 93
L + LN +KN+
Sbjct: 81 DNLRQTLNQLKNQ 93
>UNIPROTKB|Q5ZIW2 [details] [associations]
symbol:CNOT10 "CCR4-NOT transcription complex subunit 10"
species:9031 "Gallus gallus" [GO:0030014 "CCR4-NOT complex"
evidence=ISS] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF00515 SMART:SM00028 Gene3D:1.25.40.10
EMBL:AJ720672 IPI:IPI00585989 RefSeq:NP_001006364.1
UniGene:Gga.7409 ProteinModelPortal:Q5ZIW2
Ensembl:ENSGALT00000018731 GeneID:420669 KEGG:gga:420669 CTD:25904
eggNOG:NOG256461 GeneTree:ENSGT00390000001827 HOGENOM:HOG000111843
HOVERGEN:HBG077464 InParanoid:Q5ZIW2 KO:K12607 OMA:MIHPKEI
OrthoDB:EOG4CG07N NextBio:20823551 ArrayExpress:Q5ZIW2
Uniprot:Q5ZIW2
Length = 744
Score = 199 (75.1 bits), Expect = 4.6e-39, Sum P(4) = 4.6e-39
Identities = 57/186 (30%), Positives = 89/186 (47%)
Query: 394 MFNNNLGCIYYQLAKYHTSSVFLSKALSNS----ASL--------RKDKPLKLLTFSQDK 441
MF NNLGCI++ + K++ + KAL + A L +K + T +K
Sbjct: 294 MFWNNLGCIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNK 353
Query: 442 SLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLWLRLAECCLMALEKGLVAPGRS 501
+ YNCG+Q L G+P+ A C ++ V++ P LWLR+AECC+ A + +
Sbjct: 354 RYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKG 413
Query: 502 LSDGSEVKVHVIGKGKWRYLVMEDGFRKNGHVDSPEKDDSSLGSDGQPKLSMPLARQCLL 561
L + ++G+G R +V+ +N V + S++ P SM A CL
Sbjct: 414 LPSKKGIVQSIVGQGYHRKIVLASQSIQN--VVYNDGQSSAI-----PVASMEFAAICLR 466
Query: 562 NALHLL 567
NAL LL
Sbjct: 467 NALLLL 472
Score = 184 (69.8 bits), Expect = 2.2e-37, Sum P(4) = 2.2e-37
Identities = 49/133 (36%), Positives = 76/133 (57%)
Query: 299 GLSSNELSRTLVDRSISTVDL-KLKLQLYKVRFLLLTRNLKHAKREVKLAMNIARGKDSS 357
G ++N+ S S + +++ K K+ YKVR + ++LK KRE+K MN A G +S+
Sbjct: 193 GNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIKSVMNTA-G-NSA 250
Query: 358 LALFLKSQLEYARRNHRKAIKLLLALSNRTEMG-------ISSMFNNNLGCIYYQLAKYH 410
+LFLKS EY R N+RKA+KLL + + G + MF NNLGCI++ + K++
Sbjct: 251 PSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLGCIHFAMGKHN 310
Query: 411 TSSVFLSKALSNS 423
+ KAL +
Sbjct: 311 LGIFYFKKALQEN 323
Score = 168 (64.2 bits), Expect = 4.6e-39, Sum P(4) = 4.6e-39
Identities = 63/207 (30%), Positives = 103/207 (49%)
Query: 648 RRENQMIKQALLANLAYVELEMENPVKALAAARSLLELPDCSRIYIFLGHIYAAEALCLL 707
++E + ++ ++LA AYV L + + + AL A LL+ P S FLGH+YAAEAL L
Sbjct: 525 KQELENLRCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISL 584
Query: 708 NRPKEAAEHFSMYLSGGDNFDLPFSGEDCEQWRVEKIIDCEELNGGPAAAKNPSPEDSRD 767
+R +A H + + L S + +Q + + E +G PS S
Sbjct: 585 DRISDAITHLNP--ENVTDVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSAR 642
Query: 768 TMFPKPEEARGTLYVNIAAMFAMQGEFERAHHFVTQALSIL-PRST--EATLTAIYVDLM 824
TM L+ N+ + + ++ E+++A + QA S++ P+ EA L A+Y++L
Sbjct: 643 TMM---------LF-NLGSAYCLRSEYDKARKCLHQAASLIHPKEIPPEAILLAVYLELQ 692
Query: 825 LGKSQEALAKLKYCNHVRFLPSGLQLS 851
G +Q AL +K N + LPS LS
Sbjct: 693 NGNTQLALQIIKR-NQL--LPSVKTLS 716
Score = 160 (61.4 bits), Expect = 4.6e-39, Sum P(4) = 4.6e-39
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 127 NQVSAANSGSLVYMDEFDVSVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALQ 186
NQV +A + +D+ + S+ N AVI +HL +Y +A+SV E LYQ IEP +E A
Sbjct: 91 NQVHSAVE-EMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQA 149
Query: 187 ICLLLLDVALACHDAFRSADVLIYLEKAFSVGCVNQVDSGSMGQQSTN 234
+C LL+D+ L + A ++ +L LEK S G N + + +TN
Sbjct: 150 VCFLLVDLYLLTYQAEKALHLLAVLEKMISQGNNNSKNGKNESGNNTN 197
Score = 69 (29.3 bits), Expect = 4.6e-39, Sum P(4) = 4.6e-39
Identities = 20/89 (22%), Positives = 30/89 (33%)
Query: 5 DSTQSTAAGNTSGEDDSGVLSVTATLAKEAALYFQSRKFDECXXXXXXXXXXXXXXXXXX 64
D A G SG+ L+ A F + +D C
Sbjct: 4 DKAADQGAEKHDGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDDYKIT 63
Query: 65 HNIAIAEYFRDGCTDPKKLLEALNNVKNK 93
N A+AE+ + T L + LN +KN+
Sbjct: 64 LNTAVAEFCKSNQTTTDNLRQTLNQLKNQ 92
>ZFIN|ZDB-GENE-060929-368 [details] [associations]
symbol:cnot10 "CCR4-NOT transcription complex,
subunit 10" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF00515 SMART:SM00028
ZFIN:ZDB-GENE-060929-368 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00390000001827 EMBL:BX511173
IPI:IPI00995780 Ensembl:ENSDART00000125111 ArrayExpress:E7FA32
Bgee:E7FA32 Uniprot:E7FA32
Length = 748
Score = 212 (79.7 bits), Expect = 5.1e-33, Sum P(3) = 5.1e-33
Identities = 58/190 (30%), Positives = 92/190 (48%)
Query: 391 ISSMFNNNLGCIYYQLAKYHTSSVFLSKAL-------------SNSASLRKDKPLKLLTF 437
+ MF NNLGCI++ + K++ + KAL SN+ + +K + +
Sbjct: 289 VRCMFWNNLGCIHFAMGKHNLGLFYFKKALQENDHTCAQIGDGSNAQASKKFSGIPMCAL 348
Query: 438 SQDKSLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLWLRLAECCLMALEKGLVA 497
+K + YNCG+Q L G+P+ A C ++ V++ P LWLRLAECC+ A +
Sbjct: 349 LANKRYELLYNCGIQLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQ 408
Query: 498 PGRSLSDGSEVKVHVIGKGKWRYLVMEDGFRKNGHVDSPEKDDSSLGSDGQPKLSMPLAR 557
+ L + V+G+G R +V+ +N + S E +++ P SM A
Sbjct: 409 ETKGLPSKKGIVQAVVGQGYHRKIVLASQSTQNT-IYS-EAQSAAI-----PVASMEFAA 461
Query: 558 QCLLNALHLL 567
CL NAL LL
Sbjct: 462 ICLRNALLLL 471
Score = 185 (70.2 bits), Expect = 5.0e-30, Sum P(3) = 5.0e-30
Identities = 58/157 (36%), Positives = 86/157 (54%)
Query: 276 LEDDTVLALSSLEISGQNLTRPVGLSSNELSRTLVDRSISTVDL-KLKLQLYKVRFLLLT 334
LE TV +S G+N + S+N+ S L + ++ K K+ YKVR +
Sbjct: 173 LEKLTVKDGTSKNGKGENAS-----STNKESAALKAEFTAMIEAAKSKMHQYKVRAYIQM 227
Query: 335 RNLKHAKREVKLAMNIARGKDSSLALFLKSQLEYARRNHRKAIKLLLALSNRTE------ 388
++LK KRE+K MN + G +S+ +LFLKS EY R N+RKA+KLL + SN E
Sbjct: 228 KSLKACKREIKSVMNTS-G-NSAPSLFLKSNFEYLRGNYRKAVKLLNS-SNIAEHPGPLK 284
Query: 389 MG--ISSMFNNNLGCIYYQLAKYHTSSVFLSKALSNS 423
G + MF NNLGCI++ + K++ + KAL +
Sbjct: 285 TGECVRCMFWNNLGCIHFAMGKHNLGLFYFKKALQEN 321
Score = 159 (61.0 bits), Expect = 5.1e-33, Sum P(3) = 5.1e-33
Identities = 55/192 (28%), Positives = 92/192 (47%)
Query: 648 RRENQMIKQALLANLAYVELEMENPVKALAAARSLLELPDCSRIYIFLGHIYAAEALCLL 707
++E + ++ ++LA AYV L + + + AL A LL S FLGH+YAAEAL L
Sbjct: 525 KQEVENLRCSILACSAYVALALGDNLMALNHAEKLLHQAKLSGSLKFLGHLYAAEALISL 584
Query: 708 NRPKEAAEHFSMYLSGGDNFDLPFSGEDCEQWRVEKIIDCEELNGGPAAAKNPSPEDSRD 767
+R +A H + + L S + +Q + ++ E +G PS S
Sbjct: 585 DRISDAIAHLNP--ENVTDVSLGVSSSEQDQGSDKGDLEPVESSGKQTPLCYPSSVSS-- 640
Query: 768 TMFPKPEEARGTLYVNIAAMFAMQGEFERAHHFVTQALSILPRST---EATLTAIYVDLM 824
AR T+ N+ + + ++ E+E+A + QA S++ EA L +Y++L
Sbjct: 641 --------ARATMLFNLGSAYCLRSEYEKARKCLHQAASMVNTKEIPPEAILLGVYLELQ 692
Query: 825 LGKSQEALAKLK 836
G +Q AL +K
Sbjct: 693 NGNTQLALQIIK 704
Score = 123 (48.4 bits), Expect = 5.1e-33, Sum P(3) = 5.1e-33
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 71 EYFRDGCTDPKKLLEALNNVKNKSEELARATGEQ--TEGGGNIXXXXXXXXXXXXXXXNQ 128
E F+ G D L+ L+N++ ++E + T + TE + NQ
Sbjct: 35 EAFKTGSYDES--LKYLDNLQELNKEDYKITMNKAVTEFYKSGQTTSSTLKQTLMTLKNQ 92
Query: 129 VSAANSGSLVYMDEFDVSVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALQIC 188
+ A + +D+ + S+ N AVI +H+ +Y++A+ + E LYQ +EP E A +C
Sbjct: 93 MHTAVE-DIDGLDDVENSILYYNQAVIHYHMRQYSEAICIGEKLYQFLEPF-EKFAQAVC 150
Query: 189 LLLLDVALACHDAFRSADVLIYLEK 213
LL+D+ L ++ +L LEK
Sbjct: 151 FLLVDLYLLTFQPEKALHLLAVLEK 175
Score = 51 (23.0 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 15/72 (20%), Positives = 28/72 (38%)
Query: 22 GVLSVTATLAKEAALYFQSRKFDECXXXXXXXXXXXXXXXXXXHNIAIAEYFRDGCTDPK 81
G+ + +A A F++ +DE N A+ E+++ G T
Sbjct: 21 GMSDLEKEVATNAFEAFKTGSYDESLKYLDNLQELNKEDYKITMNKAVTEFYKSGQTTSS 80
Query: 82 KLLEALNNVKNK 93
L + L +KN+
Sbjct: 81 TLKQTLMTLKNQ 92
>FB|FBgn0260444 [details] [associations]
symbol:CG18616 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030014 "CCR4-NOT
complex" evidence=IDA] InterPro:IPR011990 EMBL:AE014297
Gene3D:1.25.40.10 GO:GO:0030014 eggNOG:NOG256461
GeneTree:ENSGT00390000001827 KO:K12607 EMBL:AY070614
RefSeq:NP_650215.1 ProteinModelPortal:Q9V3G6 SMR:Q9V3G6
IntAct:Q9V3G6 MINT:MINT-790768 STRING:Q9V3G6 PaxDb:Q9V3G6
PRIDE:Q9V3G6 EnsemblMetazoa:FBtr0082643 GeneID:41552
KEGG:dme:Dmel_CG18616 UCSC:CG18616-RA FlyBase:FBgn0260444
InParanoid:Q8SZP3 OMA:VVRYNLA OrthoDB:EOG4GXD3H PhylomeDB:Q9V3G6
GenomeRNAi:41552 NextBio:824361 Bgee:Q9V3G6 Uniprot:Q9V3G6
Length = 635
Score = 175 (66.7 bits), Expect = 1.4e-25, Sum P(5) = 1.4e-25
Identities = 50/156 (32%), Positives = 78/156 (50%)
Query: 362 LKSQLEYARRNHRKAIKLLLALSNR-TEMG-----ISSMFNNNLGCIYYQLAKYHTSSVF 415
LK+Q Y ++ + A K L+ ++N T+ G +S+ NN+G I+ ++ Y ++ F
Sbjct: 253 LKAQQYYIMKDFQMAAKQLMRINNECTQAGTITPQLSTCIANNMGVIHLRVRHYAIAAKF 312
Query: 416 LSKALSNSASLRKD-KPLKLLTFSQDKSLLITYNCGLQYLACGKPVLAARCFQKSSLVFY 474
AL+ L ++ + L T S +S I YN G+ L +P A +CF F+
Sbjct: 313 FQNALNFDQQLARNLRQSTLQTMSSARSCEILYNLGVAMLHLRRPKEAFQCFLVPVKQFH 372
Query: 475 KQPLLWLRLAECCLMALEKGLVAPGR-SLSDGSEVK 509
P LWLR+AE C+M E LV R S S+ K
Sbjct: 373 SNPRLWLRMAEACIMEHEAKLVEEERQSQSETPSTK 408
Score = 105 (42.0 bits), Expect = 1.4e-25, Sum P(5) = 1.4e-25
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 650 ENQMIKQALLANLAYVELEMENPVKALAAARSLLELPDCSRIYIFLGHIYAAEALCLLNR 709
EN M A+ A ++V L + + V AL + LL S + LGH+YA EAL L+++
Sbjct: 487 ENMMA--AIYAAHSFVSLRLGDHVTALEMSEKLLACERLSDAHKLLGHMYAGEALMLMDK 544
Query: 710 PKEAAEHFSMYLSGGDN-FDLPFSGEDCEQWRVEKI 744
EA +H G N FD F D W+++ +
Sbjct: 545 ASEARDHLDPTFVGTLNAFD--FETRD---WQLKSV 575
Score = 102 (41.0 bits), Expect = 1.4e-25, Sum P(5) = 1.4e-25
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 146 SVAKLNIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALQICLLLLDVALACHDAFRSA 205
+VA+ N AVI++H H + AL L PL +E +++ A + L L + LA + R+
Sbjct: 105 TVARYNRAVIYYHRHMFGTALEKLAPLVARLEALEKAMAALVATLQLQLLLATNQLNRAE 164
Query: 206 DVLIYLEKAFSVGCVNQVDSGSMGQQS 232
L YL+ + + V S + +++
Sbjct: 165 AFLDYLQ--YKLNLVATAPSSNAAEEA 189
Score = 72 (30.4 bits), Expect = 1.4e-25, Sum P(5) = 1.4e-25
Identities = 25/88 (28%), Positives = 36/88 (40%)
Query: 1 MDSRDSTQSTAAGNTSGEDDSGVLSVTATLAKEAALYFQSRKFDECXXXXXXXXXXXXXX 60
MDS +S T AG ED++ +L +A F + +FD C
Sbjct: 1 MDSAESPTKTQAG----EDEN------YSLLCQAHEQFNNSEFDRCLELLQELETRGESS 50
Query: 61 X-XXXHNIAIAEYFRDGCTDPKKLLEAL 87
HN A+ Y++ GCT LL+ L
Sbjct: 51 GPVLRHNRAVVSYYKTGCTQHSVLLKEL 78
Score = 47 (21.6 bits), Expect = 1.4e-25, Sum P(5) = 1.4e-25
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 764 DSRDTMFPKPEEARGTLYVNIAAMFAMQGEFERAHHFVTQALSILPRSTEATLTAIYVDL 823
++RD + A+ + N+A A+Q + +A + L + L ++DL
Sbjct: 566 ETRDWQLKSVDAAQNVVRYNLAVAMALQNDLPQAKALLANLTHSLVANKALALRR-FMDL 624
Query: 824 MLG 826
+G
Sbjct: 625 KMG 627
>DICTYBASE|DDB_G0281363 [details] [associations]
symbol:DDB_G0281363 "putative CCR4-NOT complex
subunit 10" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR011990 dictyBase:DDB_G0281363 EMBL:AAFI02000040
Gene3D:1.25.40.10 eggNOG:NOG256461 KO:K12607 RefSeq:XP_640748.1
EnsemblProtists:DDB0237640 GeneID:8623027 KEGG:ddi:DDB_G0281363
OMA:RNAHYLE Uniprot:Q54U17
Length = 934
Score = 156 (60.0 bits), Expect = 3.5e-18, Sum P(6) = 3.5e-18
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 377 IKLLLALSNRTEM-GIS-SMFNNNLGCIYYQLAKYHTSSVFLSKALSNSASLRKDKPLKL 434
+K L+ N M I+ +F NN+G +++ + Y ++ + SK+L +
Sbjct: 330 VKSSLSFGNDLIMESITPGIFYNNIGSLHFNIQDYTLANYYFSKSLKETQPTSTSSTTAT 389
Query: 435 LT--------FSQDKSLLITYNCGLQYLACGKPVLAARCFQKSSLVFYKQPLLWLRLAEC 486
T S DK + +N G+ +A GK LA C Q+S ++ PL+WLRLAEC
Sbjct: 390 ATTTTTPQTLISTDKRAQVFFNTGIVLMASGKYELAFSCLQESCILLRCSPLVWLRLAEC 449
Query: 487 CLMALEKGLVAPGRSLSDGS 506
C++A + L S SD S
Sbjct: 450 CILAHQNKL-KDKLSQSDNS 468
Score = 102 (41.0 bits), Expect = 3.5e-18, Sum P(6) = 3.5e-18
Identities = 18/65 (27%), Positives = 40/65 (61%)
Query: 151 NIAVIWFHLHEYAKALSVLEPLYQNIEPIDETTALQICLLLLDVALACHDAFRSADVLIY 210
N AVI+F++ ++ + +LE L+ + D+ ++ICLL ++V + ++ +L++
Sbjct: 152 NQAVIYFNIKQHGSSYKILEQLFSQVLSFDDFLGIRICLLFINVTIEGQLYDKAYSILLF 211
Query: 211 LEKAF 215
L+K+F
Sbjct: 212 LDKSF 216
Score = 63 (27.2 bits), Expect = 3.5e-18, Sum P(6) = 3.5e-18
Identities = 26/142 (18%), Positives = 53/142 (37%)
Query: 692 YIFLGHIYAAEALCLLNRPKEAAEHFSM-YLSGGDNFDLPFSGEDCEQWRVEKIIDCEEL 750
Y + H+YA EA LN K+A + S+ ++ + + +Q + + +L
Sbjct: 782 YKYYAHLYATEACLFLNLQKQAIQFLSLDFIQQLQQQHQQYQQQQQQQQQQQHTSLALDL 841
Query: 751 NGGPAAAKNPSPEDSRDTMFPKPEEARGTLYVNIAAMFAMQGEFERAHHFVTQALSILPR 810
N + + F E + L + + F + + Q +
Sbjct: 842 ESSSTLYLNLAIAHLINNDFESAEISIQQLQSYLVNQYNQYHNFYSQNQQMIQLQQLYEI 901
Query: 811 STEATLTAIYVDLMLGKSQEAL 832
S + L +Y++L G ++ AL
Sbjct: 902 SKKINLLKVYIELRKGNTENAL 923
Score = 61 (26.5 bits), Expect = 3.5e-18, Sum P(6) = 3.5e-18
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 657 ALLANLAYVELEMENPVKALAAARSLLEL 685
++LA+ AYV L NP+ AL+A++ +L +
Sbjct: 722 SILASQAYVSLCTRNPILALSASQQILNI 750
Score = 55 (24.4 bits), Expect = 3.5e-18, Sum P(6) = 3.5e-18
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 66 NIAIAEYFRDGCTDPKKLLEALNNV 90
NI +AE++ C + KL+E LN +
Sbjct: 44 NILVAEFYNRNCLNHLKLIEDLNQL 68
Score = 41 (19.5 bits), Expect = 3.5e-18, Sum P(6) = 3.5e-18
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 534 DSPEKDDSSLGSDGQPKLSMPLARQCLLNALHL 566
D E+ S LG+ LS+ A +CL NA +L
Sbjct: 625 DDMEESLSRLGT-----LSLDFANKCLRNAHYL 652
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 854 775 0.00093 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 619 (66 KB)
Total size of DFA: 359 KB (2179 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.83u 0.10s 58.93t Elapsed: 00:00:03
Total cpu time: 58.84u 0.10s 58.94t Elapsed: 00:00:03
Start: Fri May 10 13:29:19 2013 End: Fri May 10 13:29:22 2013