Query 003049
Match_columns 853
No_of_seqs 471 out of 2962
Neff 8.0
Searched_HMMs 46136
Date Thu Mar 28 16:01:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003049.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003049hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0209 P-type ATPase [Inorgan 100.0 6E-202 1E-206 1659.1 57.1 820 3-833 3-837 (1160)
2 KOG0208 Cation transport ATPas 100.0 4E-142 8E-147 1208.5 61.8 763 51-832 40-882 (1140)
3 TIGR01657 P-ATPase-V P-type AT 100.0 8E-138 2E-142 1286.6 80.3 781 53-852 18-847 (1054)
4 COG0474 MgtA Cation transport 100.0 1E-106 2E-111 989.3 42.7 617 162-852 42-687 (917)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-100 4E-105 942.8 55.8 645 150-852 10-794 (1053)
6 KOG0202 Ca2+ transporting ATPa 100.0 1E-101 3E-106 868.3 35.9 642 150-852 7-726 (972)
7 PRK10517 magnesium-transportin 100.0 1.7E-99 4E-104 923.2 53.0 605 151-852 53-685 (902)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 4.4E-98 1E-102 911.6 54.3 602 151-852 19-650 (867)
9 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.7E-98 6E-103 924.1 50.9 612 153-852 45-717 (941)
10 PRK15122 magnesium-transportin 100.0 8.2E-98 2E-102 909.9 53.6 612 151-852 31-685 (903)
11 TIGR01106 ATPase-IIC_X-K sodiu 100.0 3.5E-97 8E-102 916.5 52.8 647 151-852 21-732 (997)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 3.3E-96 7E-101 884.5 51.8 571 164-852 1-582 (755)
13 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.1E-95 2E-100 895.9 54.4 611 150-852 7-666 (884)
14 KOG0204 Calcium transporting A 100.0 2.1E-94 4.7E-99 808.4 40.1 611 162-852 115-787 (1034)
15 TIGR01116 ATPase-IIA1_Ca sarco 100.0 7.9E-89 1.7E-93 836.9 54.0 599 194-852 1-678 (917)
16 TIGR01652 ATPase-Plipid phosph 100.0 2.4E-82 5.3E-87 791.6 43.9 638 178-846 1-811 (1057)
17 PRK14010 potassium-transportin 100.0 2E-80 4.4E-85 724.0 46.2 455 242-852 92-551 (673)
18 PRK01122 potassium-transportin 100.0 3.4E-80 7.4E-85 722.8 46.8 462 236-852 83-555 (679)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 9.5E-83 2E-87 713.9 17.7 651 148-852 40-754 (1019)
20 PLN03190 aminophospholipid tra 100.0 5.6E-77 1.2E-81 735.9 51.4 647 176-850 85-918 (1178)
21 TIGR01497 kdpB K+-transporting 100.0 5.7E-75 1.2E-79 677.2 47.1 467 235-852 83-556 (675)
22 COG2217 ZntA Cation transport 100.0 8E-72 1.7E-76 651.7 46.5 466 220-851 175-646 (713)
23 KOG0205 Plasma membrane H+-tra 100.0 3.9E-73 8.4E-78 618.5 25.6 586 148-849 19-629 (942)
24 TIGR01494 ATPase_P-type ATPase 100.0 3.2E-68 7E-73 619.3 42.8 423 241-851 21-448 (499)
25 PRK11033 zntA zinc/cadmium/mer 100.0 1.1E-66 2.3E-71 626.4 42.3 459 222-851 209-675 (741)
26 KOG0207 Cation transport ATPas 100.0 2.7E-66 5.9E-71 591.0 34.6 462 238-852 360-833 (951)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 1.6E-64 3.4E-69 593.9 45.1 477 212-851 11-494 (556)
28 TIGR01512 ATPase-IB2_Cd heavy 100.0 3E-64 6.4E-69 588.0 39.9 458 209-851 9-473 (536)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 1.1E-62 2.4E-67 576.6 42.1 454 218-850 53-512 (562)
30 KOG0210 P-type ATPase [Inorgan 100.0 4E-63 8.7E-68 542.4 35.0 631 173-847 74-825 (1051)
31 PRK10671 copA copper exporting 100.0 2.8E-62 6.1E-67 599.4 46.0 466 222-851 289-759 (834)
32 KOG0206 P-type ATPase [General 100.0 2.6E-59 5.6E-64 559.3 30.9 663 174-851 28-842 (1151)
33 COG2216 KdpB High-affinity K+ 100.0 3E-55 6.6E-60 469.6 29.3 439 244-834 94-541 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 9.3E-32 2E-36 282.3 18.5 222 227-479 4-229 (230)
35 PF00702 Hydrolase: haloacid d 99.9 4.1E-26 8.9E-31 236.2 11.1 211 484-822 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.5 1.6E-13 3.4E-18 123.9 9.3 101 664-829 20-120 (152)
37 PF13246 Hydrolase_like2: Puta 99.2 1E-11 2.3E-16 110.0 4.9 73 541-617 19-91 (91)
38 TIGR02137 HSK-PSP phosphoserin 98.8 1.1E-08 2.3E-13 105.0 8.5 103 674-830 68-172 (203)
39 COG0560 SerB Phosphoserine pho 98.6 2.5E-07 5.4E-12 95.4 11.4 108 673-830 76-188 (212)
40 TIGR01487 SPP-like sucrose-pho 98.5 4.5E-07 9.8E-12 94.1 10.2 167 673-846 17-207 (215)
41 PRK11133 serB phosphoserine ph 98.5 3.9E-07 8.4E-12 99.9 9.1 114 673-836 180-297 (322)
42 COG0561 Cof Predicted hydrolas 98.4 2.3E-06 5E-11 91.8 13.4 175 667-846 12-249 (264)
43 PF00690 Cation_ATPase_N: Cati 98.4 2.3E-07 5E-12 77.8 4.0 61 151-212 5-68 (69)
44 PRK10513 sugar phosphate phosp 98.4 4.4E-06 9.6E-11 89.8 14.4 59 789-847 195-257 (270)
45 TIGR02726 phenyl_P_delta pheny 98.4 7.1E-07 1.5E-11 88.5 7.0 95 681-841 41-137 (169)
46 PRK01158 phosphoglycolate phos 98.4 1.4E-06 3E-11 91.4 9.4 169 674-845 20-216 (230)
47 TIGR00338 serB phosphoserine p 98.4 1.2E-06 2.5E-11 91.2 8.6 125 674-851 85-214 (219)
48 PF12710 HAD: haloacid dehalog 98.3 1.4E-06 3.1E-11 88.2 8.5 92 677-819 92-192 (192)
49 TIGR01670 YrbI-phosphatas 3-de 98.3 1.9E-06 4.1E-11 84.5 8.5 87 682-836 36-126 (154)
50 PRK15126 thiamin pyrimidine py 98.3 9.3E-06 2E-10 87.5 13.7 166 673-840 18-242 (272)
51 TIGR01482 SPP-subfamily Sucros 98.3 2.6E-06 5.5E-11 88.9 8.6 170 674-847 15-210 (225)
52 TIGR03333 salvage_mtnX 2-hydro 98.2 5E-06 1.1E-10 86.2 10.3 112 673-828 69-182 (214)
53 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.2 6.5E-06 1.4E-10 84.1 10.8 109 674-831 80-192 (201)
54 PRK13582 thrH phosphoserine ph 98.2 6.6E-06 1.4E-10 84.6 9.6 103 673-829 67-171 (205)
55 smart00831 Cation_ATPase_N Cat 98.2 2.6E-06 5.6E-11 70.2 4.9 52 162-214 8-60 (64)
56 PRK10976 putative hydrolase; P 98.2 2.5E-05 5.4E-10 83.8 14.0 172 673-846 18-252 (266)
57 PLN02887 hydrolase family prot 98.2 2.6E-05 5.5E-10 91.7 14.9 58 790-847 507-568 (580)
58 PF08282 Hydrolase_3: haloacid 98.1 2.4E-05 5.2E-10 82.4 12.7 174 672-847 13-247 (254)
59 KOG1615 Phosphoserine phosphat 98.1 5.5E-06 1.2E-10 80.9 5.7 106 674-828 88-199 (227)
60 PF12409 P5-ATPase: P5-type AT 98.1 5.1E-06 1.1E-10 77.5 5.3 61 50-114 17-77 (119)
61 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.3E-05 2.8E-10 80.9 8.3 114 673-826 71-186 (188)
62 PRK10530 pyridoxal phosphate ( 98.0 7.5E-05 1.6E-09 80.3 14.4 41 674-714 20-60 (272)
63 TIGR01486 HAD-SF-IIB-MPGP mann 98.0 7.9E-05 1.7E-09 79.5 13.9 40 675-714 17-56 (256)
64 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.3E-05 2.7E-10 80.3 7.3 99 674-821 73-177 (177)
65 PRK00192 mannosyl-3-phosphogly 98.0 0.00011 2.3E-09 79.4 14.0 43 672-714 19-61 (273)
66 PRK09484 3-deoxy-D-manno-octul 98.0 2.3E-05 5E-10 79.2 8.2 85 681-833 55-143 (183)
67 PRK09552 mtnX 2-hydroxy-3-keto 97.9 3.2E-05 7E-10 80.5 9.1 108 674-826 74-184 (219)
68 PLN02954 phosphoserine phospha 97.9 5.1E-05 1.1E-09 79.1 9.9 41 674-714 84-124 (224)
69 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 5.3E-05 1.1E-09 77.6 8.8 109 672-828 85-197 (202)
70 TIGR00099 Cof-subfamily Cof su 97.8 0.00024 5.2E-09 75.8 13.9 42 673-714 15-56 (256)
71 PRK03669 mannosyl-3-phosphogly 97.8 0.00048 1E-08 74.2 15.4 41 674-714 24-64 (271)
72 cd01427 HAD_like Haloacid deha 97.6 0.00018 3.9E-09 67.6 8.3 118 670-826 20-138 (139)
73 TIGR02461 osmo_MPG_phos mannos 97.5 0.00048 1E-08 72.0 10.0 43 672-714 13-55 (225)
74 PRK13222 phosphoglycolate phos 97.4 0.00054 1.2E-08 71.3 9.1 101 673-830 92-195 (226)
75 TIGR02463 MPGP_rel mannosyl-3- 97.4 0.0019 4.2E-08 67.1 12.9 39 676-714 18-56 (221)
76 COG1778 Low specificity phosph 97.4 0.00029 6.2E-09 67.0 5.6 94 681-842 42-139 (170)
77 COG0546 Gph Predicted phosphat 97.3 0.00092 2E-08 69.6 9.6 104 672-830 87-193 (220)
78 PRK14502 bifunctional mannosyl 97.3 0.002 4.3E-08 76.0 12.8 40 675-714 434-473 (694)
79 TIGR01485 SPP_plant-cyano sucr 97.2 0.00061 1.3E-08 72.4 6.9 162 672-836 19-218 (249)
80 TIGR02471 sucr_syn_bact_C sucr 97.2 0.00071 1.5E-08 71.3 7.1 54 786-839 153-212 (236)
81 PRK08238 hypothetical protein; 97.1 0.0016 3.6E-08 75.3 9.6 98 674-832 72-169 (479)
82 PLN02382 probable sucrose-phos 97.0 0.0055 1.2E-07 69.9 12.0 156 678-836 32-229 (413)
83 TIGR01454 AHBA_synth_RP 3-amin 97.0 0.0032 7E-08 64.6 9.3 42 673-714 74-115 (205)
84 PRK10187 trehalose-6-phosphate 96.9 0.0061 1.3E-07 65.4 10.8 157 674-833 36-225 (266)
85 PRK12702 mannosyl-3-phosphogly 96.8 0.01 2.2E-07 63.5 11.6 43 673-715 17-59 (302)
86 PRK13223 phosphoglycolate phos 96.8 0.0048 1E-07 66.5 9.5 42 673-714 100-141 (272)
87 TIGR01484 HAD-SF-IIB HAD-super 96.8 0.024 5.3E-07 58.0 13.9 39 674-712 17-55 (204)
88 TIGR01548 HAD-SF-IA-hyp1 haloa 96.6 0.0044 9.6E-08 63.2 6.9 43 672-714 104-146 (197)
89 TIGR01449 PGP_bact 2-phosphogl 96.6 0.0062 1.3E-07 62.7 8.0 42 673-714 84-125 (213)
90 PRK10826 2-deoxyglucose-6-phos 96.6 0.0063 1.4E-07 63.4 7.9 98 673-828 91-191 (222)
91 PRK13288 pyrophosphatase PpaX; 96.4 0.0095 2.1E-07 61.6 8.3 42 674-715 82-123 (214)
92 PRK13226 phosphoglycolate phos 96.4 0.0092 2E-07 62.5 7.8 42 673-714 94-135 (229)
93 PRK11009 aphA acid phosphatase 96.3 0.011 2.3E-07 62.1 7.8 42 673-714 113-158 (237)
94 TIGR01544 HAD-SF-IE haloacid d 96.3 0.019 4.2E-07 61.3 9.7 45 673-717 120-164 (277)
95 TIGR01545 YfhB_g-proteo haloac 96.3 0.022 4.9E-07 58.8 10.0 105 674-828 94-201 (210)
96 PRK11590 hypothetical protein; 96.2 0.044 9.4E-07 56.7 11.3 105 674-828 95-202 (211)
97 TIGR01672 AphA HAD superfamily 96.1 0.016 3.4E-07 60.8 7.7 41 675-715 115-159 (237)
98 PRK13225 phosphoglycolate phos 96.0 0.025 5.3E-07 61.0 8.7 41 674-714 142-182 (273)
99 COG4359 Uncharacterized conser 96.0 0.025 5.4E-07 55.4 7.5 110 674-826 73-183 (220)
100 PTZ00174 phosphomannomutase; P 95.9 0.038 8.2E-07 58.6 9.6 46 789-834 187-237 (247)
101 PLN02770 haloacid dehalogenase 95.7 0.029 6.3E-07 59.6 7.7 42 674-715 108-149 (248)
102 TIGR01428 HAD_type_II 2-haloal 95.7 0.035 7.5E-07 56.6 8.0 41 674-714 92-132 (198)
103 TIGR01422 phosphonatase phosph 95.7 0.04 8.7E-07 58.6 8.7 94 674-824 99-196 (253)
104 PHA02530 pseT polynucleotide k 95.6 0.046 1E-06 59.7 9.2 109 670-826 183-293 (300)
105 PRK14501 putative bifunctional 95.6 0.061 1.3E-06 66.2 11.2 187 620-832 479-704 (726)
106 TIGR03351 PhnX-like phosphonat 95.6 0.044 9.6E-07 56.8 8.6 42 673-714 86-127 (220)
107 TIGR01990 bPGM beta-phosphoglu 95.5 0.026 5.6E-07 56.6 6.4 40 673-714 86-125 (185)
108 PRK11587 putative phosphatase; 95.5 0.09 1.9E-06 54.5 10.2 98 674-830 83-184 (218)
109 TIGR01668 YqeG_hyp_ppase HAD s 95.4 0.093 2E-06 52.2 9.8 41 674-714 43-84 (170)
110 PLN03243 haloacid dehalogenase 95.4 0.05 1.1E-06 58.1 8.4 42 674-715 109-150 (260)
111 TIGR01662 HAD-SF-IIIA HAD-supe 95.3 0.054 1.2E-06 51.3 7.3 42 673-714 24-73 (132)
112 PRK13478 phosphonoacetaldehyde 95.1 0.071 1.5E-06 57.2 8.4 42 673-714 100-141 (267)
113 PRK14988 GMP/IMP nucleotidase; 95.1 0.067 1.4E-06 55.9 7.9 42 673-714 92-133 (224)
114 PRK06698 bifunctional 5'-methy 95.0 0.075 1.6E-06 61.8 8.7 43 673-715 329-371 (459)
115 KOG4383 Uncharacterized conser 95.0 0.056 1.2E-06 62.1 7.2 172 659-832 811-1023(1354)
116 smart00775 LNS2 LNS2 domain. T 95.0 0.18 3.9E-06 49.5 10.0 34 672-705 25-58 (157)
117 TIGR01685 MDP-1 magnesium-depe 94.9 0.09 2E-06 52.5 7.8 50 665-714 36-86 (174)
118 TIGR02253 CTE7 HAD superfamily 94.9 0.069 1.5E-06 55.3 7.3 41 674-714 94-134 (221)
119 PLN02580 trehalose-phosphatase 94.7 0.42 9.1E-06 53.6 13.2 52 783-834 291-357 (384)
120 PF13419 HAD_2: Haloacid dehal 94.6 0.05 1.1E-06 53.4 5.3 42 673-714 76-117 (176)
121 PLN02575 haloacid dehalogenase 94.6 0.14 3.1E-06 57.3 9.3 43 673-715 215-257 (381)
122 PRK06769 hypothetical protein; 94.6 0.13 2.8E-06 51.3 8.1 28 674-701 28-55 (173)
123 TIGR01509 HAD-SF-IA-v3 haloaci 94.4 0.16 3.4E-06 50.7 8.4 41 673-714 84-124 (183)
124 TIGR02009 PGMB-YQAB-SF beta-ph 94.2 0.1 2.3E-06 52.2 6.5 40 673-714 87-126 (185)
125 PLN02779 haloacid dehalogenase 94.1 0.24 5.3E-06 53.7 9.5 38 674-711 144-181 (286)
126 TIGR01656 Histidinol-ppas hist 93.8 0.27 5.8E-06 47.6 8.3 41 674-714 27-82 (147)
127 PLN02940 riboflavin kinase 93.6 0.21 4.5E-06 56.6 8.2 96 673-826 92-191 (382)
128 PRK08942 D,D-heptose 1,7-bisph 93.6 0.24 5.3E-06 49.7 7.9 27 674-700 29-55 (181)
129 PF06888 Put_Phosphatase: Puta 93.1 0.39 8.5E-06 50.2 8.6 111 673-823 70-193 (234)
130 PLN02205 alpha,alpha-trehalose 92.9 1.1 2.3E-05 56.0 13.5 69 621-710 584-653 (854)
131 TIGR01549 HAD-SF-IA-v1 haloaci 92.9 0.17 3.7E-06 49.1 5.4 38 674-711 64-101 (154)
132 PRK05446 imidazole glycerol-ph 92.9 0.34 7.3E-06 54.0 8.2 26 673-698 29-54 (354)
133 PRK09449 dUMP phosphatase; Pro 92.8 0.48 1.1E-05 49.1 9.1 41 673-714 94-134 (224)
134 TIGR02254 YjjG/YfnB HAD superf 92.5 0.74 1.6E-05 47.5 9.9 41 673-714 96-136 (224)
135 TIGR02252 DREG-2 REG-2-like, H 92.3 0.36 7.9E-06 49.2 7.2 40 674-714 105-144 (203)
136 KOG3120 Predicted haloacid deh 92.3 0.65 1.4E-05 47.2 8.4 42 673-714 83-125 (256)
137 PLN02811 hydrolase 92.1 0.42 9.2E-06 49.6 7.5 33 672-704 76-108 (220)
138 TIGR01691 enolase-ppase 2,3-di 91.9 0.41 8.8E-06 49.8 7.0 42 670-711 91-132 (220)
139 smart00577 CPDc catalytic doma 91.9 0.18 4E-06 48.9 4.2 44 670-714 41-84 (148)
140 TIGR01533 lipo_e_P4 5'-nucleot 91.6 0.8 1.7E-05 48.9 8.9 43 672-714 116-161 (266)
141 TIGR01675 plant-AP plant acid 90.1 2 4.3E-05 44.8 9.9 43 672-714 118-163 (229)
142 COG4030 Uncharacterized protei 89.9 1.1 2.4E-05 45.6 7.4 143 674-833 83-240 (315)
143 TIGR01459 HAD-SF-IIA-hyp4 HAD- 89.9 1.3 2.8E-05 46.7 8.6 48 667-714 17-66 (242)
144 COG2179 Predicted hydrolase of 89.8 1.1 2.5E-05 43.6 7.2 67 625-714 20-86 (175)
145 PHA02597 30.2 hypothetical pro 89.4 1.3 2.9E-05 44.9 8.0 40 674-714 74-113 (197)
146 PF05116 S6PP: Sucrose-6F-phos 89.3 0.29 6.3E-06 51.9 3.2 45 789-833 164-212 (247)
147 TIGR01664 DNA-3'-Pase DNA 3'-p 89.1 1.4 3E-05 43.7 7.7 39 676-714 44-94 (166)
148 TIGR01261 hisB_Nterm histidino 89.1 1.1 2.3E-05 44.3 6.7 26 674-699 29-54 (161)
149 TIGR00213 GmhB_yaeD D,D-heptos 88.2 2.1 4.5E-05 42.8 8.3 27 675-701 27-53 (176)
150 PLN02645 phosphoglycolate phos 87.9 1.8 4E-05 47.5 8.4 48 667-714 37-87 (311)
151 TIGR02247 HAD-1A3-hyp Epoxide 87.3 0.92 2E-05 46.5 5.3 32 672-703 92-123 (211)
152 COG3769 Predicted hydrolase (H 86.5 5.8 0.00013 40.5 10.0 38 678-715 27-64 (274)
153 TIGR01681 HAD-SF-IIIC HAD-supe 86.5 2.1 4.6E-05 40.3 6.9 39 674-712 29-68 (128)
154 PRK09456 ?-D-glucose-1-phospha 85.7 1.6 3.5E-05 44.4 6.1 32 674-705 84-115 (199)
155 PRK10563 6-phosphogluconate ph 85.7 2.1 4.6E-05 44.2 7.1 39 673-714 87-125 (221)
156 PF09419 PGP_phosphatase: Mito 85.6 3.5 7.5E-05 40.9 8.0 43 672-714 57-108 (168)
157 PRK10725 fructose-1-P/6-phosph 84.7 2.6 5.6E-05 42.2 7.0 38 675-714 89-126 (188)
158 PLN03017 trehalose-phosphatase 84.2 16 0.00035 40.8 13.3 46 662-708 119-166 (366)
159 TIGR01993 Pyr-5-nucltdase pyri 84.2 2.2 4.7E-05 42.7 6.2 38 674-714 84-121 (184)
160 PLN02919 haloacid dehalogenase 84.2 2.9 6.3E-05 53.7 8.6 41 674-714 161-201 (1057)
161 TIGR00685 T6PP trehalose-phosp 83.1 2.1 4.5E-05 45.3 5.7 49 782-830 159-219 (244)
162 TIGR01686 FkbH FkbH-like domai 82.4 3.9 8.4E-05 45.1 7.8 41 674-714 31-75 (320)
163 PF13344 Hydrolase_6: Haloacid 78.9 1.6 3.5E-05 39.3 2.6 48 667-714 7-57 (101)
164 COG0241 HisB Histidinol phosph 70.9 19 0.0004 36.2 8.0 37 791-828 108-147 (181)
165 PRK10444 UMP phosphatase; Prov 70.0 5.3 0.00012 42.3 4.3 48 667-714 10-60 (248)
166 TIGR01458 HAD-SF-IIA-hyp3 HAD- 69.0 6.7 0.00015 41.8 4.8 48 667-714 10-64 (257)
167 PRK10748 flavin mononucleotide 68.9 9.6 0.00021 40.0 6.0 29 673-702 112-140 (238)
168 TIGR01452 PGP_euk phosphoglyco 67.9 26 0.00056 37.7 9.2 48 667-714 11-61 (279)
169 TIGR01684 viral_ppase viral ph 67.6 7.6 0.00016 41.9 4.7 41 675-715 146-187 (301)
170 PLN02151 trehalose-phosphatase 66.7 71 0.0015 35.7 12.3 47 662-709 106-154 (354)
171 PHA03398 viral phosphatase sup 66.7 8.1 0.00018 41.7 4.8 41 675-715 148-189 (303)
172 COG1011 Predicted hydrolase (H 66.1 22 0.00047 36.6 7.9 43 672-715 97-139 (229)
173 TIGR01457 HAD-SF-IIA-hyp2 HAD- 65.9 11 0.00023 40.0 5.6 49 667-715 10-61 (249)
174 COG0637 Predicted phosphatase/ 64.2 23 0.00049 36.8 7.5 43 673-715 85-127 (221)
175 TIGR01680 Veg_Stor_Prot vegeta 63.0 44 0.00094 35.8 9.3 31 672-702 143-173 (275)
176 PF03767 Acid_phosphat_B: HAD 62.7 9.1 0.0002 40.0 4.3 29 674-702 115-143 (229)
177 TIGR02251 HIF-SF_euk Dullard-l 61.1 4.7 0.0001 39.7 1.7 44 670-714 38-81 (162)
178 PLN02177 glycerol-3-phosphate 56.8 49 0.0011 38.9 9.2 102 675-829 111-215 (497)
179 TIGR01493 HAD-SF-IA-v2 Haloaci 56.7 14 0.00031 36.3 4.4 35 673-714 89-123 (175)
180 COG3700 AphA Acid phosphatase 56.0 23 0.00051 34.9 5.3 93 675-831 115-214 (237)
181 TIGR01663 PNK-3'Pase polynucle 54.7 40 0.00086 39.8 8.1 39 675-713 198-248 (526)
182 PTZ00445 p36-lilke protein; Pr 52.5 25 0.00055 36.1 5.2 62 621-703 31-104 (219)
183 TIGR01689 EcbF-BcbF capsule bi 50.4 16 0.00034 34.5 3.2 33 673-705 23-55 (126)
184 TIGR01501 MthylAspMutase methy 47.0 1.3E+02 0.0027 28.7 8.7 82 626-714 23-112 (134)
185 PLN02423 phosphomannomutase 46.2 26 0.00055 37.1 4.4 41 790-831 189-234 (245)
186 PF00122 E1-E2_ATPase: E1-E2 A 45.2 2.4E+02 0.0051 29.0 11.5 73 224-304 4-88 (230)
187 cd02071 MM_CoA_mut_B12_BD meth 44.9 54 0.0012 30.4 6.0 82 626-714 21-104 (122)
188 COG0647 NagD Predicted sugar p 42.5 33 0.00071 36.8 4.5 47 665-711 15-61 (269)
189 cd02067 B12-binding B12 bindin 41.4 71 0.0015 29.3 6.2 82 626-714 21-104 (119)
190 KOG4383 Uncharacterized conser 40.9 15 0.00032 43.3 1.6 39 259-304 160-198 (1354)
191 TIGR01512 ATPase-IB2_Cd heavy 40.0 7.1E+02 0.015 29.6 15.8 36 261-305 74-109 (536)
192 PRK11507 ribosome-associated p 39.5 34 0.00073 28.6 3.1 26 258-283 38-63 (70)
193 TIGR01647 ATPase-IIIA_H plasma 38.8 2.9E+02 0.0063 34.4 12.6 94 189-283 29-133 (755)
194 PF08235 LNS2: LNS2 (Lipin/Ned 38.5 1.6E+02 0.0034 29.0 8.1 101 673-823 26-140 (157)
195 TIGR02370 pyl_corrinoid methyl 38.0 50 0.0011 33.6 4.9 81 626-714 106-188 (197)
196 PF12710 HAD: haloacid dehalog 37.9 16 0.00034 36.4 1.2 13 487-499 1-13 (192)
197 TIGR01517 ATPase-IIB_Ca plasma 36.5 4.6E+02 0.0099 33.7 14.2 37 261-305 185-221 (941)
198 PRK02261 methylaspartate mutas 36.5 1.2E+02 0.0025 29.1 6.8 82 626-714 25-114 (137)
199 COG2179 Predicted hydrolase of 35.4 1E+02 0.0022 30.4 6.2 79 622-714 52-133 (175)
200 TIGR01456 CECR5 HAD-superfamil 34.8 1.4E+02 0.003 32.9 8.2 48 667-714 9-64 (321)
201 PLN02591 tryptophan synthase 34.2 1.7E+02 0.0037 31.0 8.3 43 788-830 174-220 (250)
202 TIGR01662 HAD-SF-IIIA HAD-supe 32.6 3.3E+02 0.0071 25.1 9.3 94 620-714 29-126 (132)
203 PF06506 PrpR_N: Propionate ca 31.9 1.3E+02 0.0027 30.0 6.6 100 601-714 38-145 (176)
204 PF12689 Acid_PPase: Acid Phos 31.6 68 0.0015 31.8 4.5 41 674-714 45-86 (169)
205 TIGR01458 HAD-SF-IIA-hyp3 HAD- 30.5 59 0.0013 34.5 4.2 38 793-830 187-226 (257)
206 cd02070 corrinoid_protein_B12- 30.2 79 0.0017 32.2 4.9 81 626-714 104-186 (201)
207 TIGR00676 fadh2 5,10-methylene 29.8 1.6E+02 0.0035 31.6 7.4 82 621-702 17-99 (272)
208 PRK11479 hypothetical protein; 29.5 14 0.00031 39.4 -0.7 18 267-284 59-76 (274)
209 KOG3040 Predicted sugar phosph 29.4 94 0.002 31.8 4.9 51 664-714 13-66 (262)
210 PRK06437 hypothetical protein; 28.4 67 0.0015 26.5 3.2 34 248-282 28-61 (67)
211 PRK05585 yajC preprotein trans 28.4 1.4E+02 0.0031 27.1 5.6 12 272-283 52-63 (106)
212 cd02072 Glm_B12_BD B12 binding 27.8 1.6E+02 0.0036 27.7 6.1 81 627-714 22-110 (128)
213 cd04724 Tryptophan_synthase_al 27.7 2.2E+02 0.0047 30.0 7.8 40 790-830 174-217 (242)
214 TIGR00640 acid_CoA_mut_C methy 27.6 1.9E+02 0.004 27.5 6.5 82 626-714 24-107 (132)
215 PRK14715 DNA polymerase II lar 26.7 37 0.00081 43.4 2.0 30 255-284 988-1017(1627)
216 PRK00913 multifunctional amino 26.6 90 0.002 36.4 5.0 51 266-316 309-368 (483)
217 TIGR00739 yajC preprotein tran 26.5 1.4E+02 0.0031 25.9 5.0 13 272-284 37-49 (84)
218 cd05017 SIS_PGI_PMI_1 The memb 26.3 73 0.0016 29.3 3.5 37 676-714 56-92 (119)
219 PRK08508 biotin synthase; Prov 25.8 5.5E+02 0.012 27.6 10.7 45 679-723 101-161 (279)
220 TIGR02329 propionate_PrpR prop 25.2 3.2E+02 0.0069 32.5 9.3 81 620-714 85-165 (526)
221 PF13380 CoA_binding_2: CoA bi 25.1 82 0.0018 29.0 3.6 86 623-714 18-104 (116)
222 cd00433 Peptidase_M17 Cytosol 25.1 1E+02 0.0022 36.0 5.0 63 254-316 283-354 (468)
223 TIGR02250 FCP1_euk FCP1-like p 25.0 90 0.002 30.5 4.0 44 670-714 54-97 (156)
224 KOG1504 Ornithine carbamoyltra 25.0 62 0.0013 33.9 2.9 43 792-834 178-224 (346)
225 PF13275 S4_2: S4 domain; PDB: 24.5 43 0.00093 27.6 1.4 24 259-282 35-58 (65)
226 PF14800 DUF4481: Domain of un 23.6 63 0.0014 34.7 2.8 23 4-26 47-69 (308)
227 TIGR01509 HAD-SF-IA-v3 haloaci 23.5 4.6E+02 0.01 25.3 9.1 85 619-714 88-179 (183)
228 TIGR01522 ATPase-IIA2_Ca golgi 23.5 4.7E+02 0.01 33.3 11.0 93 204-305 69-172 (884)
229 smart00306 HintN Hint (Hedgeho 23.2 87 0.0019 27.3 3.3 28 255-282 72-99 (100)
230 cd04728 ThiG Thiazole synthase 22.9 5E+02 0.011 27.5 9.0 90 621-710 22-143 (248)
231 PRK04302 triosephosphate isome 22.7 3.8E+02 0.0083 27.6 8.5 45 786-830 155-204 (223)
232 PRK05015 aminopeptidase B; Pro 22.7 62 0.0013 36.8 2.6 63 255-317 235-306 (424)
233 PRK06846 putative deaminase; V 22.5 1.2E+03 0.025 26.5 14.8 47 784-830 262-311 (410)
234 PF02699 YajC: Preprotein tran 22.4 1.2E+02 0.0026 26.2 3.8 13 272-284 36-48 (82)
235 PRK14898 DNA-directed RNA poly 22.4 69 0.0015 40.3 3.3 29 255-283 169-197 (858)
236 TIGR01675 plant-AP plant acid 22.0 1.2E+02 0.0025 31.8 4.3 70 622-701 126-206 (229)
237 TIGR00262 trpA tryptophan synt 21.7 6.2E+02 0.013 26.9 9.9 38 792-830 187-229 (256)
238 TIGR01668 YqeG_hyp_ppase HAD s 21.3 3.3E+02 0.0071 26.8 7.3 84 618-714 45-131 (170)
239 TIGR02247 HAD-1A3-hyp Epoxide 21.1 6.4E+02 0.014 25.3 9.7 90 619-714 97-191 (211)
240 TIGR01460 HAD-SF-IIA Haloacid 21.0 1.1E+02 0.0024 31.9 4.1 48 667-714 7-58 (236)
241 PF01455 HupF_HypC: HupF/HypC 21.0 2.1E+02 0.0046 23.7 4.9 32 254-285 16-50 (68)
242 PRK05886 yajC preprotein trans 21.0 2.5E+02 0.0054 25.7 5.7 10 241-250 26-35 (109)
243 PF02219 MTHFR: Methylenetetra 21.0 2E+02 0.0044 31.0 6.2 44 660-703 68-112 (287)
244 PF13242 Hydrolase_like: HAD-h 20.9 1.5E+02 0.0033 24.6 4.1 29 803-831 22-52 (75)
245 cd02069 methionine_synthase_B1 20.4 1.1E+02 0.0023 31.7 3.7 76 626-709 110-185 (213)
246 PRK15424 propionate catabolism 20.3 4.8E+02 0.01 31.1 9.5 81 620-714 95-175 (538)
247 TIGR00677 fadh2_euk methylenet 20.3 3E+02 0.0065 29.7 7.2 43 660-702 57-100 (281)
248 cd04906 ACT_ThrD-I_1 First of 20.1 1.7E+02 0.0038 25.1 4.4 72 617-708 11-83 (85)
249 PF12017 Tnp_P_element: Transp 20.1 1.3E+02 0.0029 31.5 4.3 36 680-715 199-234 (236)
No 1
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-202 Score=1659.11 Aligned_cols=820 Identities=57% Similarity=0.936 Sum_probs=781.0
Q ss_pred ccccCCcceeEEEeeecccccceecchhhHHHHHHHHHHhhccCCc-----cchhhHHHHHHHHHHHHHhhcccccccce
Q 003049 3 SFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDF-----GDAAIVLGGLVAFHILVWLFTAWSVDFKC 77 (853)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~w~~~~~~ 77 (853)
...|. |.|+.+.||++||..+|+|||||++||+.|++.|+...+| +..+++++++.++|+|++|+++|+++++|
T Consensus 3 ~~~v~-~~v~~~~l~~~~~l~~~lyV~Pf~~l~a~~~~~~~~~~~~~~~~~~~t~i~~g~l~~~hilvlL~~~Wsv~v~~ 81 (1160)
T KOG0209|consen 3 KFRVD-PLVEMVILYVKRPLHKRLYVWPFAILYAMWLTLWYPQADFYEEFRELTFIALGALSAIHILVLLFTFWSVKVRC 81 (1160)
T ss_pred ccccc-chhhhheeeeeccccccccccchHHHHHHHHHHhhhccccceeeeeeeEEEecHHHHHHHHHHHHHhhchheeE
Confidence 34455 9999999999999999999999999999999999866652 44569999999999999999999999999
Q ss_pred eEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecccCCCCCCCCCCcEEEEEeeeEEEEecCCCceeecCCCCccccc
Q 003049 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFG 157 (853)
Q Consensus 78 ~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~y~~~~~~~~f~~~~~~~~~~~~ 157 (853)
+++|++.+++++|||++|+|++|+|+.++|||++....+ +..++||+|||.||+|+++++.|.++.||+++.+.
T Consensus 82 ~~~~~~~~~v~~at~i~v~pt~nnGs~~lv~l~~~~~~~------~~~q~~F~Fqk~ry~~~~e~~~F~~~~fp~~~~~g 155 (1160)
T KOG0209|consen 82 FFTCSKTKDVSKATHILVTPTPNNGSSELVPLHRGVLED------GMEQYFFEFQKKRYLYDEEKGKFSRLTFPTDEPFG 155 (1160)
T ss_pred EEeeccccCcccccEEEEEccCCCCCcceeEeeecccCC------CceEEEEEEEEeeEEEcccccceeccccCcCCcch
Confidence 999999999999999999999999999999999876422 24789999999999999999999999999999999
Q ss_pred cccccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 003049 158 YYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMA 237 (853)
Q Consensus 158 ~~~~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~ 237 (853)
.|++++|+..+.++...+.+||+|.+++|+|+|.++|+|+..+|||+||+||++|||+|+|||||+|+++|++.+|++.+
T Consensus 156 ~~~k~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDeyWYySlFtLfMli~fE~tlV 235 (1160)
T KOG0209|consen 156 YFQKSTGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTLFMLIAFEATLV 235 (1160)
T ss_pred hhhhccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCcc
Q 003049 238 KSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGEST 317 (853)
Q Consensus 238 ~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~ 317 (853)
+||.|++.++|+|+.+|+.+.|+|+++|+.+.++||+|||+|+|.+|.+|+ .||||.+|++|+|+||||||||||+
T Consensus 236 ~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~----~vPCDllLL~GsciVnEaMLtGESv 311 (1160)
T KOG0209|consen 236 KQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDS----HVPCDLLLLRGSCIVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccC----cCCceEEEEecceeechhhhcCCCc
Confidence 999999999999999999999999999999999999999999999987666 9999999999999999999999999
Q ss_pred ccccccccCCCCCccccccC-CCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCc
Q 003049 318 PQWKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTA 396 (853)
Q Consensus 318 Pv~K~~~~~~~~~~~~~~~~-~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~ 396 (853)
|++|++++.++.++.+|.++ +|.|++|+||+++|++++.....++|||+|+|+|+||||+|+||+|+|+|+++.++++.
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 99999999999999999998 59999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCC
Q 003049 397 NSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPF 476 (853)
Q Consensus 397 ~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~ 476 (853)
++++++.||+||++||+++++|+|..|..+++|+.+++++.|++|+|++|||+|||+++|||+.|+.+|+|.+|||++|+
T Consensus 392 Nn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPF 471 (1160)
T KOG0209|consen 392 NNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPF 471 (1160)
T ss_pred ccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCcc
Confidence 99999999999999999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred CcccCccccEEEeCCCCcccCCCeEEEEEEecCCC-ccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcC
Q 003049 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555 (853)
Q Consensus 477 ~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~-~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~ 555 (853)
|||++|+||+||||||||||+++|.|+|+.+.+.+ ....+.++.|.++.+++|+||+++..+++++|||+|+|++++.+
T Consensus 472 RIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~ 551 (1160)
T KOG0209|consen 472 RIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVG 551 (1160)
T ss_pred ccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcC
Confidence 99999999999999999999999999999985543 56677888999999999999999999999999999999999999
Q ss_pred ceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCC-----EEEEEEcCcHHHHHHhhccCChhHHHHHHHHHh
Q 003049 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-----EFFAFVKGAPETIQDRLTDLPSSYIETYKKYTH 630 (853)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~-----~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~ 630 (853)
|.+++++.+.+.++...+++|.++|+|+|++|||||+++.++ ++++.+|||||+|.+++.++|++|+++|++|++
T Consensus 552 W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 552 WNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTR 631 (1160)
T ss_pred cccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhh
Confidence 999999999998888889999999999999999999999854 699999999999999999999999999999999
Q ss_pred ccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH
Q 003049 631 QGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ 710 (853)
Q Consensus 631 ~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~ 710 (853)
+|+||+|+|||.++....++.++++|+++|+||+|+||++|.||+|+|++++|++|++++|+++|||||||+||+|||++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCeEEEccCC--CCceeEeecCCcccccccchhhhc-cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeC
Q 003049 711 VHIVTKPVLILCPVK--NGKVYEWVSPDETEKIQYSEKEVE-GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA 787 (853)
Q Consensus 711 ~gI~~~~~~il~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~s 787 (853)
+||+.++..+++.++ +++.+.|+++|++..+|+++.... .+...|++|+||++++++.+++.+.+++++++||||++
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 999998777776654 445899999999999999884433 38889999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 788 PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 788 P~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
|.||+.+|+.||+.|+.|+|||||+||+||||+||||||+.+++++
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e 837 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEE 837 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChh
Confidence 9999999999999999999999999999999999999999988874
No 2
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-142 Score=1208.48 Aligned_cols=763 Identities=30% Similarity=0.487 Sum_probs=645.7
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccceeEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecccCCCCC-----CCCCC
Q 003049 51 AAIVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST-----PVDED 125 (853)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 125 (853)
+++.+++++++ ++++|++||.|+|+.++.+.+| ++++|++|.|.. ++|..++.++.+....+..+. .+...
T Consensus 40 ~~y~v~~vLTl-G~~~Li~rWlP~~~vk~~~~Pc-sl~~ae~V~Ie~--~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 115 (1140)
T KOG0208|consen 40 IFYNVLCVLTL-GLFHLIFRWLPKWKVKLRGSPC-SLADAEWVVIED--QNGTSEIVDVLAQSSEEPLSTSRYSQEGVGR 115 (1140)
T ss_pred hhhHHHHHHHh-hHHHHHHhhcchheEEEEeccc-CcccccEEEEEc--CCCcEEehhhhhhhccCCccccchhhcccch
Confidence 34455666666 5568999999999999999997 799999999986 468889988876553222111 12234
Q ss_pred cEEEEEeeeEEEEecC-CCceeec---CCCCccc-ccccc-ccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhh
Q 003049 126 EICFDFRKQHFIYSRE-KGTFCKL---PYPTKET-FGYYL-KCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCM 199 (853)
Q Consensus 126 ~~~f~~~~~~y~~~~~-~~~f~~~---~~~~~~~-~~~~~-~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~ 199 (853)
.++|.|++.+|.|.++ +..|.+. +...... .++.. .+.||... ++..|+..||+|.+..++++.++++.++.+
T Consensus 116 ~r~~~~kkl~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~gL~~~-~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL 194 (1140)
T KOG0208|consen 116 VRDFAYKKLEYDPVSELRFIWPPFQKAEFRDDPRWYSTESYVSNGLERQ-EIIDRRIIYGRNVISLPIKSISQILVKEVL 194 (1140)
T ss_pred hhhhhhhcceeccccccceeeccccchhhccchhhhccceeccCCccHH-HHHhHHhhcCCceeeeecccHHHHHHHhcc
Confidence 5799999999999886 4444441 1111111 22222 46899986 899999999999999999999999999999
Q ss_pred chhHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEE
Q 003049 200 EPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVV 279 (853)
Q Consensus 200 ~pf~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV 279 (853)
+|||+||+||+++|..|+|+||+.+++++.+.+....+++.++...++|+|...+++|+|+|||.|++|+++|||||||+
T Consensus 195 ~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil 274 (1140)
T KOG0208|consen 195 NPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDIL 274 (1140)
T ss_pred chHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEE
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred EEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccccccccCCCC---CccccccCCCCeEEEeceEEeecCCCC
Q 003049 280 SIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRET---GEKLSARRDKSHVLFGGTKILQHTPDK 356 (853)
Q Consensus 280 ~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~---~~~~~~~~~~~~~lf~GT~v~q~~~~~ 356 (853)
.+.++ +. ..|||++|++|+|+||||||||||+|+.|.+++.... .....++.+++|.+|+||+++|++...
T Consensus 275 ~i~~~-~~-----~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~ 348 (1140)
T KOG0208|consen 275 YIPPP-GK-----IMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYL 348 (1140)
T ss_pred EECCC-Ce-----EeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCC
Confidence 99983 22 9999999999999999999999999999999873222 224445558899999999999988654
Q ss_pred CCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHH
Q 003049 357 TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436 (853)
Q Consensus 357 ~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l 436 (853)
.+.++|+|+||||+|.+|+|+|+|+++++..+.+++++++|++++.++|+++++|..+..... +.+....++
T Consensus 349 -------g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~-g~~~~~iii 420 (1140)
T KOG0208|consen 349 -------GGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLL-GVPLKTIII 420 (1140)
T ss_pred -------CCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHc-CCCHHHHhh
Confidence 788999999999999999999999999999999999999999999999999988866554333 566778899
Q ss_pred HhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC----c
Q 003049 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA----E 512 (853)
Q Consensus 437 ~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~----~ 512 (853)
++++++|.+|||+||+++++++.++..||+|+||||.+|.||+.+|++|++|||||||||+|++++.++...++. .
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~ 500 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGP 500 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999975432 0
Q ss_pred c--------------c-cccCCCC-HHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCc----------c---
Q 003049 513 L--------------E-DDMTKVP-VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDE----------K--- 563 (853)
Q Consensus 513 ~--------------~-~~~~~~~-~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~----------~--- 563 (853)
. . ......+ ......+|+|||+...+|.++|||+|..|+++.+|.+...+ .
T Consensus 501 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p 580 (1140)
T KOG0208|consen 501 ELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIP 580 (1140)
T ss_pred hhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccC
Confidence 0 0 0001112 35677899999999999999999999999999999985421 0
Q ss_pred --cccCC---C-----CCcceEEEEEecCCCCCCceEEEEEeC--CEEEEEEcCcHHHHHHhh--ccCChhHHHHHHHHH
Q 003049 564 --AMPKR---G-----GGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRL--TDLPSSYIETYKKYT 629 (853)
Q Consensus 564 --~~~~~---~-----~~~~~~i~~~~~F~s~~krmsvi~~~~--~~~~~~~KGapE~i~~~~--~~ip~~~~~~~~~~~ 629 (853)
..+.. . ....+.++++|||+|++||||||++.. +++++|+|||||.|.+.| .++|++|.+.+++|+
T Consensus 581 ~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt 660 (1140)
T KOG0208|consen 581 TVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYT 660 (1140)
T ss_pred CEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHH
Confidence 11111 0 112589999999999999999999985 579999999999999999 578999999999999
Q ss_pred hccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHH
Q 003049 630 HQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS 709 (853)
Q Consensus 630 ~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~ 709 (853)
.+|+||||+|+|.++...+++.+.++|+.+|+||+|+|+++|+|+||++++.+|++|++|+||++|+||||.+||+.|||
T Consensus 661 ~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVak 740 (1140)
T KOG0208|consen 661 HQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAK 740 (1140)
T ss_pred hCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhh
Confidence 99999999999999987888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCcCCCCe--EEEccC--CCC--ceeEeecCCcccccccchh-----------hhccccCceeEEEehhhhHHhhc--c
Q 003049 710 QVHIVTKPV--LILCPV--KNG--KVYEWVSPDETEKIQYSEK-----------EVEGLTDAHDLCIGGDCFEMLQQ--T 770 (853)
Q Consensus 710 ~~gI~~~~~--~il~~~--~~~--~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~itG~~l~~l~~--~ 770 (853)
+|||+.+.. .+.... +.+ ..++|..++..+....... .......++++|++|+.|+.+.. .
T Consensus 741 eCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~ 820 (1140)
T KOG0208|consen 741 ECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFP 820 (1140)
T ss_pred cccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcH
Confidence 999997642 222222 222 2799998887665422211 12234567999999999999984 3
Q ss_pred hhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 771 SAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 771 ~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
+.+.+++.+..|||||+|+||.++|+.||+.|++|+|||||+|||+|||+||||||+++++.
T Consensus 821 ~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaEA 882 (1140)
T KOG0208|consen 821 ELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAEA 882 (1140)
T ss_pred HHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhhH
Confidence 67899999999999999999999999999999999999999999999999999999986654
No 3
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=7.6e-138 Score=1286.57 Aligned_cols=781 Identities=42% Similarity=0.669 Sum_probs=664.9
Q ss_pred hHHHHHHHHHHHHHhhcccccccceeEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecccCC----CCCCCCCCcEE
Q 003049 53 IVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAV----SSTPVDEDEIC 128 (853)
Q Consensus 53 ~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 128 (853)
++.+..++.|++++|+++|+++||++++|++|+..+.|+|+++.|.+++|..+++++++....+. ....+....+|
T Consensus 18 ~~~~~~~~~~g~~~l~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1054)
T TIGR01657 18 IYLVTLILTFGLVLLLLTWLPEWKVKLRYVPVSNEDAETVVIVDPTPNSGSDYIVELSNKSLSNDLQTENAVEGGEEPIY 97 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhhhEEEeeCCcccCcEEEEEECCcccCCceEEeecccccccccccccccCCCCceEE
Confidence 45556777789999999999999999999999999999999999988899999999876432110 01112245689
Q ss_pred EEEeeeEEEEecCCCc-eeecCCCCccc-ccccc----ccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchh
Q 003049 129 FDFRKQHFIYSREKGT-FCKLPYPTKET-FGYYL----KCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF 202 (853)
Q Consensus 129 f~~~~~~y~~~~~~~~-f~~~~~~~~~~-~~~~~----~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf 202 (853)
|+||+.||+|+++++. |.+++++.++. +..+. ...||+++ |+++|+++||+|++++|.|+++++|++++++||
T Consensus 98 f~~~~~~y~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~GLs~~-e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~ 176 (1054)
T TIGR01657 98 FDFRKQRFSYHEKELKIFSPLPYLFKEKSFGVYSTCAGHSNGLTTG-DIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPF 176 (1054)
T ss_pred EEEEEEEEEEECCCCceEEecccccccccchhhhhhhhhccCCCHH-HHHHHHHhcCCCeeecCCCCHHHHHHHHHhchH
Confidence 9999999999999996 99999987764 44443 35799987 999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEc
Q 003049 203 FVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIG 282 (853)
Q Consensus 203 ~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~ 282 (853)
++||+||+++|++++||+|++++++++++.+....++++|+.++|++|...+..++|+|||+|++|+++||||||+|.|+
T Consensus 177 ~i~~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~ 256 (1054)
T TIGR01657 177 YVFQVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIP 256 (1054)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEe
Confidence 99999999999999999999999999999999999999999999999987788999999999999999999999999999
Q ss_pred --CCCCCCCCCceeecceeeecceeEEeeccCCCCccccccccccCC-CCCc-cccccCCCCeEEEeceEEeecCCCCCC
Q 003049 283 --RSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGR-ETGE-KLSARRDKSHVLFGGTKILQHTPDKTF 358 (853)
Q Consensus 283 --~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~-~~~~-~~~~~~~~~~~lf~GT~v~q~~~~~~~ 358 (853)
+|+ .|||||+|++|+|.||||+|||||.|+.|.+++.. .+++ ......+++|++|+||.|+|++++..
T Consensus 257 ~~~g~-------~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g- 328 (1054)
T TIGR01657 257 RPEEK-------TMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPG- 328 (1054)
T ss_pred cCCCC-------EecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCC-
Confidence 877 99999999999999999999999999999986531 1222 22234478999999999998765321
Q ss_pred CCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHh
Q 003049 359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSC 438 (853)
Q Consensus 359 ~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~ 438 (853)
+|.+.|+|++||++|.+|+++|++.+++++.+++++++..|+.+++++|+++++++|..+... +.++..++++|
T Consensus 329 -----~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~-~~~~~~~~l~~ 402 (1054)
T TIGR01657 329 -----DTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKD-GRPLGKIILRS 402 (1054)
T ss_pred -----CCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHH
Confidence 478999999999999999999999999888899999999999999999988888877666544 56788899999
Q ss_pred heeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCcc----c
Q 003049 439 SLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL----E 514 (853)
Q Consensus 439 ~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~----~ 514 (853)
+.++++++||+||++++++++.|+.+|+|++|+|++|.++|.+|++|+||||||||||+|+|+|.+++..++... .
T Consensus 403 l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~ 482 (1054)
T TIGR01657 403 LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV 482 (1054)
T ss_pred HHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999987543211 0
Q ss_pred cc-cCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccC-cccccCC--------CCCcceEEEEEecCCC
Q 003049 515 DD-MTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSD-EKAMPKR--------GGGNAVQIVQRHHFAS 584 (853)
Q Consensus 515 ~~-~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~-~~~~~~~--------~~~~~~~i~~~~~F~s 584 (853)
.+ ....+.....++++||++...+|+.+|||+|.|++++++|.+..+ +...... .....++++++|||+|
T Consensus 483 ~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S 562 (1054)
T TIGR01657 483 TEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSS 562 (1054)
T ss_pred ccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecC
Confidence 11 112344567789999999988889999999999999999987652 2111110 1125789999999999
Q ss_pred CCCceEEEEEeC--CEEEEEEcCcHHHHHHhhc--cCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhh
Q 003049 585 HLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLT--DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVE 660 (853)
Q Consensus 585 ~~krmsvi~~~~--~~~~~~~KGapE~i~~~~~--~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E 660 (853)
++|||||+++.. +++++++|||||.|+++|. ++|++|.+.+++|+++|+||||+|||.++..+..+..+++|+++|
T Consensus 563 ~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E 642 (1054)
T TIGR01657 563 ALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVE 642 (1054)
T ss_pred CCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHh
Confidence 999999999874 4678999999999999997 789999999999999999999999999986555556678899999
Q ss_pred cCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCC-eEEEcc-----CCCCceeEeec
Q 003049 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLILCP-----VKNGKVYEWVS 734 (853)
Q Consensus 661 ~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~-~~il~~-----~~~~~~~~~~~ 734 (853)
+||+|+|+++|+||+|||++++|++|+++||+++|+||||+.||.+||++|||++++ ..++.. .+....+.|+.
T Consensus 643 ~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~ 722 (1054)
T TIGR01657 643 SNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEV 722 (1054)
T ss_pred cCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEe
Confidence 999999999999999999999999999999999999999999999999999999654 333322 12234688988
Q ss_pred CCcccc------cccch---hhhccccCceeEEEehhhhHHhhc--chhHHhhcccceEEEeeChhhHHHHHHHHHHcCC
Q 003049 735 PDETEK------IQYSE---KEVEGLTDAHDLCIGGDCFEMLQQ--TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR 803 (853)
Q Consensus 735 ~~~~~~------~~~~~---~~~~~~~~~~~l~itG~~l~~l~~--~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~ 803 (853)
.++... .+... .......+.+++|+||++++.+.+ .+++.+++.++.||||++|+||.+||+.||+.|+
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~ 802 (1054)
T TIGR01657 723 IDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDY 802 (1054)
T ss_pred cCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCC
Confidence 876321 11111 112233456789999999998754 3578999999999999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 804 MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 804 ~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+|+|||||+|||||||+|||||||+++ | +..+++...++++|.+|
T Consensus 803 ~V~m~GDG~ND~~ALK~AdVGIam~~~-d---as~AA~f~l~~~~~~~I 847 (1054)
T TIGR01657 803 TVGMCGDGANDCGALKQADVGISLSEA-E---ASVAAPFTSKLASISCV 847 (1054)
T ss_pred eEEEEeCChHHHHHHHhcCcceeeccc-c---ceeecccccCCCcHHHH
Confidence 999999999999999999999999865 3 23567889999998765
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-106 Score=989.28 Aligned_cols=617 Identities=29% Similarity=0.404 Sum_probs=514.9
Q ss_pred cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhH----HHHHHHHHHHHHHHHHH
Q 003049 162 CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW----YYSLFTLFMLFMFESTM 236 (853)
Q Consensus 162 ~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~----~~s~~~l~~lv~~~~~~ 236 (853)
..||+++ |+.+|++.||+|++.... .+++..|..++.+||..+.+++.++..+-+.| .++..+++++++.....
T Consensus 42 ~~GLs~~-e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I~~~i~~n~~~g 120 (917)
T COG0474 42 TTGLSEE-EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLG 120 (917)
T ss_pred ccCCCHH-HHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeeehHHHHHHHHHH
Confidence 5799996 999999999999998654 58999999999999988888877776655555 44444445555444444
Q ss_pred HHHHHHH---HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeeccee-EEeeccC
Q 003049 237 AKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSA-IVNEAIL 312 (853)
Q Consensus 237 ~~~~~k~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~-~VdES~L 312 (853)
.+|+.|+ ++++++|. +.+++|+|||+|++|+++||||||||.++.|+ .||||++|+++++ .||||+|
T Consensus 121 ~~qe~~a~~~l~~lk~~~--~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd-------~vPAD~rLl~~~~l~VdEs~L 191 (917)
T COG0474 121 FVQEYRAEKALEALKKMS--SPKAKVLRDGKFVEIPASELVPGDIVLLEAGD-------VVPADLRLLESSDLEVDESAL 191 (917)
T ss_pred HHHHHHHHHHHHHHHhhc--cCceEEEeCCcEEEecHHHCCCCcEEEECCCC-------ccccceEEEEecCceEEcccc
Confidence 5555554 77777765 46899999999999999999999999999987 9999999999987 8999999
Q ss_pred CCCccccccccccCCCCCccccccC-CCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhcccc
Q 003049 313 TGESTPQWKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFST 391 (853)
Q Consensus 313 TGES~Pv~K~~~~~~~~~~~~~~~~-~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~ 391 (853)
||||.|+.|.+.+....+.. .+ +++|++|+||.|. .|.+.++|++||++|.+|++.+.+...+
T Consensus 192 TGES~pv~K~~~~~~~~~~~---~~~d~~n~l~sGt~V~-------------~G~~~giVvaTG~~T~~G~ia~~~~~~~ 255 (917)
T COG0474 192 TGESLPVEKQALPLTKSDAP---LGLDRDNMLFSGTTVV-------------SGRAKGIVVATGFETEFGKIARLLPTKK 255 (917)
T ss_pred cCCCcchhcccccccccccc---ccCCccceEEeCCEEE-------------cceEEEEEEEEcCccHHHHHHHhhcccc
Confidence 99999999988654432222 23 6789999999999 6899999999999999999999998776
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhccee
Q 003049 392 ERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIF 471 (853)
Q Consensus 392 ~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~ 471 (853)
+..+++++....+..+++.++++++++++..+.......+...++.++.+++++||++||+.++++.+.+..+|+|++++
T Consensus 256 ~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~i 335 (917)
T COG0474 256 EVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAI 335 (917)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccch
Confidence 77889999999999999888888877776665443122267889999999999999999999999999999999999999
Q ss_pred ccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccC-CCC---HHHHHHHHHhccceeeC--CcccCCH
Q 003049 472 CTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMT-KVP---VRTQEILASCHALVFVD--NKLVGDP 545 (853)
Q Consensus 472 ~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~-~~~---~~~~~~la~chsl~~~~--~~~~gdp 545 (853)
|+++.++|.+|++|+||+|||||||+|+|+|.+++..++.....+.. ..+ ....+.++.||+..... ....|||
T Consensus 336 vr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdp 415 (917)
T COG0474 336 VRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDP 415 (917)
T ss_pred hhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCc
Confidence 99999999999999999999999999999999999874111111100 011 13456778999876543 3468999
Q ss_pred HHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHHHHHHhhcc--------
Q 003049 546 LEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTD-------- 616 (853)
Q Consensus 546 le~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE~i~~~~~~-------- 616 (853)
+|.|+++++.+.-...+ ...-...+++++.+||+|++||||++++. ++++++++|||||.|+++|+.
T Consensus 416 tE~Al~~~a~~~~~~~~----~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 416 TEGALVEFAEKLGFSLD----LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cHHHHHHHHHhcCCcCC----HHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 99999999865421000 11112345789999999999999999985 556999999999999999973
Q ss_pred --CChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEE
Q 003049 617 --LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLA 694 (853)
Q Consensus 617 --ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~ 694 (853)
.++.+.+..++|+++|+||+++|||.++...... .. +++|+||+|+|+++|+||+|+|++++|+.|++|||+++
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~---~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD---EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc---hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 2467888999999999999999999776432211 11 78999999999999999999999999999999999999
Q ss_pred EEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCce-eEEEehhhhHHhhcchhH
Q 003049 695 MITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAH-DLCIGGDCFEMLQQTSAV 773 (853)
Q Consensus 695 miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~itG~~l~~l~~~~~~ 773 (853)
||||||+.||.+||++|||..+. . ++++||.+++.+.++ ++
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~-------------------------------------~~~~vi~G~el~~l~~~-el 609 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEA-------------------------------------ESALVIDGAELDALSDE-EL 609 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCC-------------------------------------CceeEeehHHhhhcCHH-HH
Confidence 99999999999999999987431 1 679999999999885 78
Q ss_pred HhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 774 ~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
.+.+.++.||||+||+||.+||+.||+.|++|+|||||+|||||||+|||||||+ +|+|+ +++++|....+++|.++
T Consensus 610 ~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i 687 (917)
T COG0474 610 AELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATI 687 (917)
T ss_pred HHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHH
Confidence 8888888899999999999999999999999999999999999999999999999 68886 88889999999998764
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.8e-100 Score=942.80 Aligned_cols=645 Identities=21% Similarity=0.276 Sum_probs=506.7
Q ss_pred CCCcccccccccc--CCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHH
Q 003049 150 YPTKETFGYYLKC--TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTL 226 (853)
Q Consensus 150 ~~~~~~~~~~~~~--~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l 226 (853)
.+.++.++.++.+ +||+++ |+++|+++||+|+++.+. +++|.+|++++.+||.++++++.++++...+|.++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~-ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~iIl 88 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHD-EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGGVIS 88 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHH-HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3455667777653 699997 999999999999999875 589999999999999999999999999888898888888
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecc
Q 003049 227 FMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG 303 (853)
Q Consensus 227 ~~lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G 303 (853)
+++++......+|+.|+ +++|++| .+.+++|+|||++++|+++||||||||.++.|+ .|||||+|+++
T Consensus 89 ~vv~in~~i~~~QE~~aekal~aL~~l--~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd-------~VPAD~rLi~~ 159 (1053)
T TIGR01523 89 AIIALNILIGFIQEYKAEKTMDSLKNL--ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGD-------TIPADLRLIET 159 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCceEEEeCCeeeecCHhhCCCCCEEEECCCC-------EeeccEEEEEe
Confidence 87777777777776555 4555544 345899999999999999999999999999988 99999999998
Q ss_pred -eeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhH
Q 003049 304 -SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGK 382 (853)
Q Consensus 304 -~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~ 382 (853)
++.||||+|||||.||.|.+.+....++ -...+++.|++|+||.|+ +|.+.|+|++||.+|..|+
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~-~~~~~d~~n~lf~GT~V~-------------~G~g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEE-DTPIGDRINLAFSSSAVT-------------KGRAKGICIATALNSEIGA 225 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccc-cCCcccCCCccccCceEE-------------eeeEEEEEEEecCccHHHH
Confidence 5899999999999999998633211000 112346789999999999 6999999999999999999
Q ss_pred HHHHhccccc-----------------------------------cCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCC
Q 003049 383 LMRTILFSTE-----------------------------------RVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDP 427 (853)
Q Consensus 383 l~r~i~~~~~-----------------------------------~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~ 427 (853)
+.+++...++ ..++.++....+..++.+++++.+++++..+...
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~- 304 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD- 304 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 9998743221 1256666666666666555555444433322111
Q ss_pred CchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEe
Q 003049 428 TRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVG 507 (853)
Q Consensus 428 ~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~ 507 (853)
.....++.++.++++++|++||+.++++.+.+..+|+|++++++++.++|.+|+++++|+|||||||+|+|+|..++.
T Consensus 305 --~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~ 382 (1053)
T TIGR01523 305 --VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWI 382 (1053)
T ss_pred --hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEE
Confidence 123456677888899999999999999999999999999999999999999999999999999999999999999874
Q ss_pred cCC---------C--ccc-cc---------------------c--------C--CCC--------HHHHHHHHHhcccee
Q 003049 508 LSN---------A--ELE-DD---------------------M--------T--KVP--------VRTQEILASCHALVF 536 (853)
Q Consensus 508 ~~~---------~--~~~-~~---------------------~--------~--~~~--------~~~~~~la~chsl~~ 536 (853)
.+. . ... .+ . + +.+ ...+...+.||....
T Consensus 383 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~ 462 (1053)
T TIGR01523 383 PRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATV 462 (1053)
T ss_pred cCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCee
Confidence 310 0 000 00 0 0 000 123445667876554
Q ss_pred eC----C--cccCCHHHHHHHhhcC-ceeccC-----ccccc-------------CCCCCcceEEEEEecCCCCCCceEE
Q 003049 537 VD----N--KLVGDPLEKAALKGID-WSYKSD-----EKAMP-------------KRGGGNAVQIVQRHHFASHLKRMSV 591 (853)
Q Consensus 537 ~~----~--~~~gdple~a~l~~~~-~~~~~~-----~~~~~-------------~~~~~~~~~i~~~~~F~s~~krmsv 591 (853)
.+ + ...|||+|.|++.++. +.+... ..... .......+++++++||+|++||||+
T Consensus 463 ~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msv 542 (1053)
T TIGR01523 463 FKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMAS 542 (1053)
T ss_pred eccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEE
Confidence 32 2 3679999999998863 211100 00000 0011245789999999999999999
Q ss_pred EEEeC-C-EEEEEEcCcHHHHHHhhccC---------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChh--hh-
Q 003049 592 VVRVQ-E-EFFAFVKGAPETIQDRLTDL---------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVS--DA- 651 (853)
Q Consensus 592 i~~~~-~-~~~~~~KGapE~i~~~~~~i---------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~--~~- 651 (853)
+++.+ + ++++++|||||.|+++|... .+.+.+..++|+++|+||||+|||.++..+.. ..
T Consensus 543 v~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~ 622 (1053)
T TIGR01523 543 IYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLK 622 (1053)
T ss_pred EEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhh
Confidence 99874 3 47899999999999999532 13466778899999999999999998753211 11
Q ss_pred -hhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCcee
Q 003049 652 -RSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY 730 (853)
Q Consensus 652 -~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~ 730 (853)
...+|+++|+||+|+|+++|+||+|+|++++|++|+++||+|+|+||||+.||.+||+++||.+++.....
T Consensus 623 ~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~-------- 694 (1053)
T TIGR01523 623 NETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR-------- 694 (1053)
T ss_pred ccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccc--------
Confidence 12356789999999999999999999999999999999999999999999999999999999854210000
Q ss_pred EeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcC
Q 003049 731 EWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGD 810 (853)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GD 810 (853)
+ ......++||.+++.+.+ +++.+++.++.||||++|+||.++|+.||+.|++|+|+||
T Consensus 695 -----~---------------~~~~~~vitG~~l~~l~~-~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GD 753 (1053)
T TIGR01523 695 -----D---------------EIMDSMVMTGSQFDALSD-EEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGD 753 (1053)
T ss_pred -----c---------------ccccceeeehHHhhhcCH-HHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCC
Confidence 0 001347999999999876 5678888899999999999999999999999999999999
Q ss_pred CcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 811 GTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 811 G~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+||+||||+|||||||+ +|++. ++.++|.++.+++|.+|
T Consensus 754 GvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I 794 (1053)
T TIGR01523 754 GVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASI 794 (1053)
T ss_pred CcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHH
Confidence 999999999999999998 78885 88899999999999875
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-101 Score=868.28 Aligned_cols=642 Identities=24% Similarity=0.340 Sum_probs=502.9
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHH
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTL 226 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l 226 (853)
.++++.+++|.. .+||+++ |+.+|+++||.|+++.+. .++|+++.+|+.+|...+++.+.++.+....|..++.+.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~-ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~vI~ 85 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSD-EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFVIT 85 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHH-HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccceeee
Confidence 456677778873 6799997 999999999999998764 689999999999999999888888877766666666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecc-e
Q 003049 227 FMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-S 304 (853)
Q Consensus 227 ~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G-~ 304 (853)
+++++.....++|++++.+++..+ ...|..++|+|+|+.+.+++.||||||||.++-|| +||||.+|++- +
T Consensus 86 liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGD-------kVPADlRl~e~~s 158 (972)
T KOG0202|consen 86 LIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGD-------KIPADLRLIEAKS 158 (972)
T ss_pred eeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCC-------ccccceeEEeeee
Confidence 555555555567766554444443 23567899999999999999999999999999988 99999999997 5
Q ss_pred eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHH
Q 003049 305 AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384 (853)
Q Consensus 305 ~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~ 384 (853)
..||||.|||||.|+.|..-.... +.-...++|.|++|+||.|. .|.++|+|+.||.+|..|++.
T Consensus 159 l~iDeS~LTGEs~pv~K~t~~v~~--~~~~~~~dk~NiaFsGT~V~-------------~G~a~GIVi~TG~nTeiG~I~ 223 (972)
T KOG0202|consen 159 LRIDESSLTGESEPVSKDTDAVPK--DENADVQDKKNIAFSGTLVV-------------AGRAKGIVIGTGLNTEIGKIF 223 (972)
T ss_pred eeeecccccCCcccccccCccccC--CCCCccccceeeEeecceee-------------cCceeEEEEeccccchHHHHH
Confidence 789999999999999996533221 11112348999999999998 799999999999999999999
Q ss_pred HHhccccccCCcchhhHHHHHHHHH-HHHHHHHhhhhh-hcc-cCC---C---chhhHHHHHhheeeEeecCCCchHHHH
Q 003049 385 RTILFSTERVTANSWESGLFILFLV-VFAVIAAGYVLK-KGM-EDP---T---RSKYKLFLSCSLIITSVIPPELPMELS 455 (853)
Q Consensus 385 r~i~~~~~~~~~~~~~~~~fi~~ll-~~ai~~~~~~~~-~~~-~~~---~---~~~~~~~l~~~~ii~~~vP~~Lp~~ls 455 (853)
++|....+.+++.++....|-..|. +++++....|.. .|. .+| + +.....|..++.+.++++|++||+.++
T Consensus 224 ~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT 303 (972)
T KOG0202|consen 224 KMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVT 303 (972)
T ss_pred HHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhh
Confidence 9888776667887765555444333 222222111111 111 111 2 333445667788888999999999999
Q ss_pred HHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC--cc-----------------ccc
Q 003049 456 IAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA--EL-----------------EDD 516 (853)
Q Consensus 456 lav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~--~~-----------------~~~ 516 (853)
.+++.+.+||+|++.+++....+|.||.+++||+|||||||+|+|.+..++..+.. .. ...
T Consensus 304 ~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~ 383 (972)
T KOG0202|consen 304 TTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDG 383 (972)
T ss_pred hhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecC
Confidence 99999999999999999999999999999999999999999999999999865432 00 000
Q ss_pred c----CCCCH----HHHHHHHHhccceeeCCcc-----cCCHHHHHHHhhcCceeccCccc----ccCCCC------Ccc
Q 003049 517 M----TKVPV----RTQEILASCHALVFVDNKL-----VGDPLEKAALKGIDWSYKSDEKA----MPKRGG------GNA 573 (853)
Q Consensus 517 ~----~~~~~----~~~~~la~chsl~~~~~~~-----~gdple~a~l~~~~~~~~~~~~~----~~~~~~------~~~ 573 (853)
. ..... +...+-+.|+......+.. .|.|.|.|+...+.. ++-.+.. ....+. ...
T Consensus 384 ~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeK-m~l~~~~~~~~s~~~~~~c~~~~~~~ 462 (972)
T KOG0202|consen 384 LYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEK-MGLPGTRSTNLSNEEASACNRVYSRL 462 (972)
T ss_pred ccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHH-cCCCcchhhcccccccccchhHHHHh
Confidence 0 01111 2233445676554443444 999999998765421 1111100 000000 123
Q ss_pred eEEEEEecCCCCCCceEEEEEeC-C--EEEEEEcCcHHHHHHhhcc---------CC------hhHHHHHHHHHhccceE
Q 003049 574 VQIVQRHHFASHLKRMSVVVRVQ-E--EFFAFVKGAPETIQDRLTD---------LP------SSYIETYKKYTHQGSRV 635 (853)
Q Consensus 574 ~~i~~~~~F~s~~krmsvi~~~~-~--~~~~~~KGapE~i~~~~~~---------ip------~~~~~~~~~~~~~G~rv 635 (853)
++-.+.+||+|++|+|||.+... + ++.+|+|||||.|+++|++ .| +.+.+...+|+++|+||
T Consensus 463 ~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRv 542 (972)
T KOG0202|consen 463 FKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRV 542 (972)
T ss_pred hhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceE
Confidence 45568999999999999999863 2 3789999999999999943 22 45677788999999999
Q ss_pred EEEEeeeCCCC---ChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcC
Q 003049 636 LALAFKSLPDM---TVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (853)
Q Consensus 636 lala~k~l~~~---~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~g 712 (853)
||+|+++.+.. +....+..+|...|+||+|+|++++.||+|++++++|+.|+++||||+||||||..||.+|||++|
T Consensus 543 LalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iG 622 (972)
T KOG0202|consen 543 LALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIG 622 (972)
T ss_pred EEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhC
Confidence 99999987641 122234567889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHH
Q 003049 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKE 792 (853)
Q Consensus 713 I~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~ 792 (853)
|...+. +-..-++||++|+.|.+ +++.+...++.||||++|++|.
T Consensus 623 i~~~~e----------------------------------d~~~~~~TG~efD~ls~-~~~~~~~~~~~vFaR~~P~HK~ 667 (972)
T KOG0202|consen 623 IFSEDE----------------------------------DVSSMALTGSEFDDLSD-EELDDAVRRVLVFARAEPQHKL 667 (972)
T ss_pred CCcCCc----------------------------------cccccccchhhhhcCCH-HHHHHHhhcceEEEecCchhHH
Confidence 985311 01345899999999987 5677888899999999999999
Q ss_pred HHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 793 LILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 793 ~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+||+.||++|.+|+|+|||+||+||||.|||||||| +||++ ++.++|.++.||||++|
T Consensus 668 kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstI 726 (972)
T KOG0202|consen 668 KIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTI 726 (972)
T ss_pred HHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHH
Confidence 999999999999999999999999999999999999 99997 99999999999999986
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.7e-99 Score=923.17 Aligned_cols=605 Identities=24% Similarity=0.301 Sum_probs=483.4
Q ss_pred CCccccccccc-cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHH
Q 003049 151 PTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFM 228 (853)
Q Consensus 151 ~~~~~~~~~~~-~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~ 228 (853)
+.++.++.++. .+|||++ |+++|+++||+|+++.+++ ++|.+|++++.+||+++++++.++.++.+.|..+++++++
T Consensus 53 ~~~~v~~~l~~~~~GLs~~-ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~a~~I~~i 131 (902)
T PRK10517 53 PEEELWKTFDTHPEGLNEA-EVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVIALM 131 (902)
T ss_pred CHHHHHHHhCCCCCCCCHH-HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 34445666653 4699987 9999999999999998875 6999999999999999887655544443445677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEEC------CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeee
Q 003049 229 LFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLIL 301 (853)
Q Consensus 229 lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~------g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill 301 (853)
+++......+|++|+.+.++++ +..+.+++|+|| |++++|+++||||||+|.|++|+ .|||||+|+
T Consensus 132 v~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd-------~IPaDg~li 204 (902)
T PRK10517 132 VAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD-------MIPADLRIL 204 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC-------EEeeeEEEE
Confidence 7777777777777766555543 224568999999 78999999999999999999988 999999999
Q ss_pred cce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccch
Q 003049 302 GGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (853)
Q Consensus 302 ~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~ 380 (853)
+|+ +.||||+|||||.|+.|.+.+..+.+ ....+++|.+|+||.|+ +|.+.++|++||.+|..
T Consensus 205 ~g~~l~VDES~LTGES~PV~K~~~~~~~~~---~~~~~~~n~vfaGT~V~-------------~G~~~~vV~atG~~T~~ 268 (902)
T PRK10517 205 QARDLFVAQASLTGESLPVEKFATTRQPEH---SNPLECDTLCFMGTNVV-------------SGTAQAVVIATGANTWF 268 (902)
T ss_pred EcCceEEEecCcCCCCCceecccccccccc---cCccccccceeeCceEe-------------eeeEEEEEEEeccccHH
Confidence 996 69999999999999999874321111 11235788999999999 69999999999999999
Q ss_pred hHHHHHhccccccCCcchhhHHHHHHHH----HHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHH
Q 003049 381 GKLMRTILFSTERVTANSWESGLFILFL----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (853)
Q Consensus 381 g~l~r~i~~~~~~~~~~~~~~~~fi~~l----l~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lsl 456 (853)
|++.+.+....+..++.++....+...+ ++++++.+++.++. ..++...++.++.++++++||+||+++++
T Consensus 269 GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~-----~~~~~~~l~~alsv~V~~~Pe~LP~~vt~ 343 (902)
T PRK10517 269 GQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT-----KGDWWEAALFALSVAVGLTPEMLPMIVTS 343 (902)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh-----cCCHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 9999998877666777666554443333 33332222221111 22456678888899999999999999999
Q ss_pred HHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcccee
Q 003049 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (853)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (853)
+++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|+|..+....+. ...+.+...+.|...
T Consensus 344 ~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~--------~~~~ll~~a~l~~~~-- 413 (902)
T PRK10517 344 TLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK--------TSERVLHSAWLNSHY-- 413 (902)
T ss_pred HHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC--------CHHHHHHHHHhcCCc--
Confidence 9999999999999999999999999999999999999999999999987532221 011222222222111
Q ss_pred eCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHHHHHHhhc
Q 003049 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLT 615 (853)
Q Consensus 537 ~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE~i~~~~~ 615 (853)
+ ...|||+|.|++.++.... .. .....++.++++||+|++|||+++++. ++.+.+++|||||.|.++|.
T Consensus 414 -~-~~~~~p~d~All~~a~~~~--~~------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~ 483 (902)
T PRK10517 414 -Q-TGLKNLLDTAVLEGVDEES--AR------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS 483 (902)
T ss_pred -C-CCCCCHHHHHHHHHHHhcc--hh------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhch
Confidence 1 2369999999999865321 00 011346678899999999999999876 45678999999999999995
Q ss_pred cC-------C------hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHH
Q 003049 616 DL-------P------SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKI 682 (853)
Q Consensus 616 ~i-------p------~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~ 682 (853)
.+ | +.+.+..++++++|+||+++|||.++..+. ...+ ..|+||+|+|+++|+||+|||++++
T Consensus 484 ~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~----~~~~-~~e~~l~~lGli~~~Dp~R~~a~~a 558 (902)
T PRK10517 484 QVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQR-ADESDLILEGYIAFLDPPKETTAPA 558 (902)
T ss_pred hhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc----cccc-ccccCceeeehHhhhCcchhhHHHH
Confidence 42 1 235566788999999999999998864321 1112 2488999999999999999999999
Q ss_pred HHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehh
Q 003049 683 LSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGD 762 (853)
Q Consensus 683 I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~ 762 (853)
|++|+++|++|+|+||||+.||.+||+++||... -+++|.
T Consensus 559 I~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~----------------------------------------~v~~G~ 598 (902)
T PRK10517 559 LKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----------------------------------------EVLIGS 598 (902)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc----------------------------------------CceeHH
Confidence 9999999999999999999999999999999521 268999
Q ss_pred hhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccc
Q 003049 763 CFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSE 842 (853)
Q Consensus 763 ~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~ 842 (853)
+++.+.+ +++.+.++++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||++|+|+ +++++|.
T Consensus 599 el~~l~~-~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADi 675 (902)
T PRK10517 599 DIETLSD-DELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADI 675 (902)
T ss_pred HHHhCCH-HHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCE
Confidence 9998865 678899999999999999999999999999999999999999999999999999999999885 8999999
Q ss_pred cccccCCccC
Q 003049 843 ASKDENTKSV 852 (853)
Q Consensus 843 ~~~~~~~~~~ 852 (853)
++.+++|.+|
T Consensus 676 VLldd~~~~I 685 (902)
T PRK10517 676 ILLEKSLMVL 685 (902)
T ss_pred EEecCChHHH
Confidence 9999999875
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=4.4e-98 Score=911.57 Aligned_cols=602 Identities=23% Similarity=0.266 Sum_probs=486.2
Q ss_pred CCccccccccc-cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHH
Q 003049 151 PTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFM 228 (853)
Q Consensus 151 ~~~~~~~~~~~-~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~ 228 (853)
+.++.++.+.. .+||+++ |+++|+++||+|+++.+.+ +++.+|++++.+||.++++++.++|++.+.|+.+++++++
T Consensus 19 ~~~~~~~~l~~~~~GLs~~-ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI~~i 97 (867)
T TIGR01524 19 GKETLLRKLGVHETGLTNV-EVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVIIALM 97 (867)
T ss_pred CHHHHHHHhCCCCCCCCHH-HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHhhhH
Confidence 34444555653 4699997 9999999999999988764 6999999999999999999999988887888888888877
Q ss_pred HHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEE------CCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeeccee
Q 003049 229 LFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHR------CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADML 299 (853)
Q Consensus 229 lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R------~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~i 299 (853)
+++......+++.|+ +++|+++ .+..++|+| ||++++|+++||||||+|.+++|+ .|||||+
T Consensus 98 v~~~~~i~~~~e~~a~ka~~~L~~l--~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd-------~VPaDg~ 168 (867)
T TIGR01524 98 VLASGLLGFIQESRAERAAYALKNM--VKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD-------IIPADAR 168 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--ccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC-------EEcccEE
Confidence 777777777766555 5555554 345799999 999999999999999999999988 9999999
Q ss_pred eecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCccc
Q 003049 300 ILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFET 378 (853)
Q Consensus 300 ll~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T 378 (853)
|++|+ +.||||+|||||.|+.|.+.+..+.+. ...+++|.+|+||.|. +|.+.++|++||.+|
T Consensus 169 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~---~~~~~~n~vfaGT~v~-------------~G~~~~~V~~tG~~T 232 (867)
T TIGR01524 169 VISARDLFINQSALTGESLPVEKFVEDKRARDP---EILERENLCFMGTNVL-------------SGHAQAVVLATGSST 232 (867)
T ss_pred EEecCceEEEcccccCCCCcccccCCccccccc---cccccccceecCCeEE-------------EeEEEEEEEEEcCcc
Confidence 99996 699999999999999998743211111 1236789999999999 699999999999999
Q ss_pred chhHHHHHhccccccCCcchhhHHHHHH----HHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHH
Q 003049 379 SQGKLMRTILFSTERVTANSWESGLFIL----FLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMEL 454 (853)
Q Consensus 379 ~~g~l~r~i~~~~~~~~~~~~~~~~fi~----~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~l 454 (853)
..|++.+.+.. .+..++.++....+.. +.++++++.+++.++. ..++...++.++.++++++||+||+++
T Consensus 233 ~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 233 WFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM-----KGDWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred HHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh-----cCCHHHHHHHHHHHHHHhCcchHHHHH
Confidence 99999998877 4445565554444333 3333333322222111 224566788888899999999999999
Q ss_pred HHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccc
Q 003049 455 SIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHAL 534 (853)
Q Consensus 455 slav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl 534 (853)
+++++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|+|.+++..++. .....+.++++++.
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------~~~~~l~~a~l~~~ 377 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------TSERVLKMAWLNSY 377 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC---------CHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999998643221 12222223333221
Q ss_pred eeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCC-EEEEEEcCcHHHHHHh
Q 003049 535 VFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDR 613 (853)
Q Consensus 535 ~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~-~~~~~~KGapE~i~~~ 613 (853)
. + ...+||+|.|+++++.... .. .....++.++.+||+|++|||+++++..+ .+++++|||||.+.++
T Consensus 378 ~--~-~~~~~p~~~Al~~~~~~~~-~~-------~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~ 446 (867)
T TIGR01524 378 F--Q-TGWKNVLDHAVLAKLDESA-AR-------QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTV 446 (867)
T ss_pred C--C-CCCCChHHHHHHHHHHhhc-hh-------hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHh
Confidence 1 1 2367999999998865320 00 01134667888999999999999987644 4789999999999999
Q ss_pred hccC-------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchH
Q 003049 614 LTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSA 680 (853)
Q Consensus 614 ~~~i-------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~ 680 (853)
|... .+.+.+..+.++++|+||+++|||+++..+. +..+ +.|+||+|+|+++|+||+|+|++
T Consensus 447 c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~----~~~~-~~e~~l~~lGli~l~Dp~R~~~~ 521 (867)
T TIGR01524 447 CTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA----DFTK-TDEEQLIIEGFLGFLDPPKESTK 521 (867)
T ss_pred chhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc----cccc-cccCCcEEEEEEEeeCCCchhHH
Confidence 9642 1346677789999999999999999864321 1112 24889999999999999999999
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
++|++|+++||+++|+||||+.||.+||+++||.++ -+++
T Consensus 522 ~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----------------------------------------~v~~ 561 (867)
T TIGR01524 522 EAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----------------------------------------DFLL 561 (867)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----------------------------------------Ceee
Confidence 999999999999999999999999999999999632 1578
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSS 840 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~ 840 (853)
|.+++.+.+ +++.+++.++.||||++|+||.++|+.||++|++|+|+|||+||+||||+|||||||++|+|+ +++++
T Consensus 562 g~~l~~~~~-~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aA 638 (867)
T TIGR01524 562 GADIEELSD-EELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEAS 638 (867)
T ss_pred cHhhhhCCH-HHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhC
Confidence 888888765 578889999999999999999999999999999999999999999999999999999998885 89999
Q ss_pred cccccccCCccC
Q 003049 841 SEASKDENTKSV 852 (853)
Q Consensus 841 ~~~~~~~~~~~~ 852 (853)
|.++.+++|.+|
T Consensus 639 DiVLldd~~~~I 650 (867)
T TIGR01524 639 DIILLEKSLMVL 650 (867)
T ss_pred CEEEecCChHHH
Confidence 999999999865
No 9
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.7e-98 Score=924.10 Aligned_cols=612 Identities=23% Similarity=0.279 Sum_probs=482.0
Q ss_pred ccccccccc--cCCCC--cHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchh----------
Q 003049 153 KETFGYYLK--CTGHS--TEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDE---------- 217 (853)
Q Consensus 153 ~~~~~~~~~--~~GLs--~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~---------- 217 (853)
++.++.++. .+||+ ++ |+++|+++||+|+++.|.+ +++.+|++++.+|+.++++++.+++++..
T Consensus 45 ~~~~~~l~t~~~~GLs~~~~-ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~ 123 (941)
T TIGR01517 45 EGIATKLKTDLNEGVRLSSS-TLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKAD 123 (941)
T ss_pred HHHHHHhCcCcccCCCCCHH-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCc
Confidence 344555654 46999 76 9999999999999998865 89999999999999888777766665422
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCc
Q 003049 218 ---YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR--VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDK 292 (853)
Q Consensus 218 ---y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~--~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~ 292 (853)
.|+.++++++++++......+++.++.++++++. ..+.+++|+|||+|++|+++||||||+|.|++|+
T Consensus 124 ~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd------- 196 (941)
T TIGR01517 124 TETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD------- 196 (941)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCC-------
Confidence 6777877766665555555556555555554443 2246899999999999999999999999999988
Q ss_pred eeecceeeecc-eeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEE
Q 003049 293 SVPADMLILGG-SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV 371 (853)
Q Consensus 293 ~vPaD~ill~G-~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V 371 (853)
.|||||+|++| ++.||||+|||||.|+.|.+ ++.|++|+||.|. +|.+.++|
T Consensus 197 ~IPaD~~li~g~~l~VdES~LTGES~pv~K~~--------------~~~n~v~~GT~v~-------------~G~~~~iV 249 (941)
T TIGR01517 197 VVPADGVFISGLSLEIDESSITGESDPIKKGA--------------PKDSFLLSGTVVN-------------EGSGRMLV 249 (941)
T ss_pred EecccEEEEEcCcEEEEecccCCCCCcccccC--------------CCCceEEeCCeEE-------------eeEEEEEE
Confidence 99999999999 79999999999999999975 1357899999999 68999999
Q ss_pred EeeCcccchhHHHHHhccccccCCcchhhHH----HHHHHHHHHHHHHHhhh---hhhc-c-cC---C---CchhhHHHH
Q 003049 372 LRTGFETSQGKLMRTILFSTERVTANSWESG----LFILFLVVFAVIAAGYV---LKKG-M-ED---P---TRSKYKLFL 436 (853)
Q Consensus 372 ~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~----~fi~~ll~~ai~~~~~~---~~~~-~-~~---~---~~~~~~~~l 436 (853)
++||.+|..|++++.+..+.+ .++.++... .+..+.++++++.++++ +... . .+ + ...+...++
T Consensus 250 ~~tG~~T~~gki~~~~~~~~~-~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (941)
T TIGR01517 250 TAVGVNSFGGKLMMELRAEGE-DTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFI 328 (941)
T ss_pred EEeCCCcHHHHHHHhhccCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHH
Confidence 999999999999998876543 344433322 33332222222222211 1111 0 00 0 124566788
Q ss_pred HhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC-cccc
Q 003049 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELED 515 (853)
Q Consensus 437 ~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~-~~~~ 515 (853)
.++.+++++|||+||++++++++.++.+|+|++++++++..+|.+|++|++|||||||||+|+|+|.+++..++. ....
T Consensus 329 ~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 408 (941)
T TIGR01517 329 IAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD 408 (941)
T ss_pred HHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc
Confidence 899999999999999999999999999999999999999999999999999999999999999999998754321 0000
Q ss_pred ccCCCCHH---HHHHHHHhccceeeC------CcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCC
Q 003049 516 DMTKVPVR---TQEILASCHALVFVD------NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHL 586 (853)
Q Consensus 516 ~~~~~~~~---~~~~la~chsl~~~~------~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~ 586 (853)
.....+.. .+...+.|++..... ....|||+|.|+++++.+.- .+... ....+++++.+||+|++
T Consensus 409 ~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~-~~~~~-----~~~~~~~~~~~pF~s~~ 482 (941)
T TIGR01517 409 VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLG-RDYQE-----VRAEEKVVKIYPFNSER 482 (941)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcC-CCHHH-----HHhhchhccccccCCCC
Confidence 00111111 222334444432211 24689999999999875421 11000 01235677889999999
Q ss_pred CceEEEEEeCC-EEEEEEcCcHHHHHHhhccC-------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhh
Q 003049 587 KRMSVVVRVQE-EFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR 652 (853)
Q Consensus 587 krmsvi~~~~~-~~~~~~KGapE~i~~~~~~i-------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~ 652 (853)
|||+++++.++ ++++++|||||.|.++|... .+++.+.+++|+++|+||+++|||.++..+..
T Consensus 483 k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~--- 559 (941)
T TIGR01517 483 KFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP--- 559 (941)
T ss_pred CeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc---
Confidence 99999998754 58899999999999999642 13567788999999999999999998643211
Q ss_pred hhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEe
Q 003049 653 SLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEW 732 (853)
Q Consensus 653 ~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~ 732 (853)
..+..|+||+|+|+++|+||+|+|++++|++||++|++++|+||||+.||.+||++|||.++
T Consensus 560 --~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~---------------- 621 (941)
T TIGR01517 560 --RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF---------------- 621 (941)
T ss_pred --cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC----------------
Confidence 12345899999999999999999999999999999999999999999999999999999843
Q ss_pred ecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCc
Q 003049 733 VSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT 812 (853)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ 812 (853)
...+++|++++.+.+ +++.+++.++.||||++|+||.++|+.||+.|++|+|||||+
T Consensus 622 ----------------------~~~vi~G~~~~~l~~-~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGv 678 (941)
T TIGR01517 622 ----------------------GGLAMEGKEFRRLVY-EEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT 678 (941)
T ss_pred ----------------------CceEeeHHHhhhCCH-HHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 124899999998765 678889999999999999999999999999999999999999
Q ss_pred ccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 813 NDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 813 ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||+||||+|||||||+ +|+|. +++++|.++.+|+|.+|
T Consensus 679 NDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I 717 (941)
T TIGR01517 679 NDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASI 717 (941)
T ss_pred chHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHH
Confidence 9999999999999999 89886 89999999999999765
No 10
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8.2e-98 Score=909.94 Aligned_cols=612 Identities=23% Similarity=0.309 Sum_probs=480.9
Q ss_pred CCccccccccc-cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhH---------
Q 003049 151 PTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW--------- 219 (853)
Q Consensus 151 ~~~~~~~~~~~-~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~--------- 219 (853)
+.++.++.++. .+|||++ |+++|+++||+|+++.++ +++|.+|++++.+||.++++++.+++++.++|
T Consensus 31 ~~~~v~~~l~~~~~GLs~~-ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~ 109 (903)
T PRK15122 31 SLEETLANLNTHRQGLTEE-DAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEET 109 (903)
T ss_pred CHHHHHHHhCCCCCCCCHH-HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 44555666664 4699997 999999999999999876 57999999999999999988888888776543
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEEC------CEEEEeecCCcCCCeEEEEcCCCCCCCC
Q 003049 220 --YYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTGE 290 (853)
Q Consensus 220 --~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~------g~~~~I~s~~LvpGDiV~l~~g~~d~~~ 290 (853)
..++++++++++......+|++|+.+.++++. ..+.+++|+|| |++++|+++||||||+|.|++|+
T Consensus 110 ~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd----- 184 (903)
T PRK15122 110 DLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD----- 184 (903)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC-----
Confidence 34555555555656666677666544444432 23568999999 48999999999999999999988
Q ss_pred Cceeecceeeecce-eEEeeccCCCCccccccccccC--C------CCCccccccCCCCeEEEeceEEeecCCCCCCCCC
Q 003049 291 DKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMG--R------ETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLK 361 (853)
Q Consensus 291 ~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~--~------~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~ 361 (853)
.|||||+|++|+ +.||||+|||||.|+.|.+.+. . ..++. ....+++|.+|+||.|+
T Consensus 185 --~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~-~~~~~~~n~vfaGT~V~----------- 250 (903)
T PRK15122 185 --MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDE-GSLLDLPNICFMGTNVV----------- 250 (903)
T ss_pred --EEeeeEEEEEcCceEEEccccCCCCcceeeecccccccccccccccccc-CCcccccceEEeCCEEE-----------
Confidence 999999999996 6899999999999999986210 0 00010 11236789999999999
Q ss_pred CCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhhee
Q 003049 362 TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLI 441 (853)
Q Consensus 362 ~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~i 441 (853)
+|.+.++|++||.+|..|++.+.+.. ++..++.++....+...+..++++....++..+... ..++...++.++.+
T Consensus 251 --~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-~~~~~~~l~~aisl 326 (903)
T PRK15122 251 --SGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-KGDWLEALLFALAV 326 (903)
T ss_pred --eeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cCCHHHHHHHHHHH
Confidence 69999999999999999999998876 334455544333333222222222111111111111 23456678888999
Q ss_pred eEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCC
Q 003049 442 ITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVP 521 (853)
Q Consensus 442 i~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~ 521 (853)
+++++||+||++++++++.+..+|+|+|++++++..+|.+|++|++|||||||||+|+|+|.+++..++. .+
T Consensus 327 ~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~--------~~ 398 (903)
T PRK15122 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR--------KD 398 (903)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC--------Ch
Confidence 9999999999999999999999999999999999999999999999999999999999999998754321 01
Q ss_pred HHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEE
Q 003049 522 VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFF 600 (853)
Q Consensus 522 ~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~ 600 (853)
.+.+. ++.+++.. ....|||+|.|+++++...-. .. ....++.++++||+|.+|||+++++. +++++
T Consensus 399 ~~~l~-~a~l~s~~---~~~~~~p~e~All~~a~~~~~-~~-------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~ 466 (903)
T PRK15122 399 ERVLQ-LAWLNSFH---QSGMKNLMDQAVVAFAEGNPE-IV-------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHL 466 (903)
T ss_pred HHHHH-HHHHhCCC---CCCCCChHHHHHHHHHHHcCc-hh-------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEE
Confidence 12222 22221211 134799999999998754210 00 01245678899999999999999987 56788
Q ss_pred EEEcCcHHHHHHhhccC---------C----hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceee
Q 003049 601 AFVKGAPETIQDRLTDL---------P----SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAG 667 (853)
Q Consensus 601 ~~~KGapE~i~~~~~~i---------p----~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G 667 (853)
+++|||||.++++|..+ + +.+.+..+.++++|+||+++|||.++..+. ....++..|+||+|+|
T Consensus 467 ~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~---~~~~~~~~e~~l~~lG 543 (903)
T PRK15122 467 LICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGES---RAQYSTADERDLVIRG 543 (903)
T ss_pred EEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccc---ccccccccccCcEEEE
Confidence 99999999999999642 2 235566788999999999999998864221 1123345689999999
Q ss_pred EeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhh
Q 003049 668 FAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (853)
Q Consensus 668 ~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (853)
+++|+||+|||++++|++|+++||+|+|+||||+.||.+||+++||...
T Consensus 544 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~------------------------------- 592 (903)
T PRK15122 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG------------------------------- 592 (903)
T ss_pred EEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-------------------------------
Confidence 9999999999999999999999999999999999999999999999521
Q ss_pred hccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 748 VEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
-+++|.+++.+.+ +++.+.++++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||
T Consensus 593 ---------~vi~G~el~~~~~-~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 593 ---------EPLLGTEIEAMDD-AALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred ---------CccchHhhhhCCH-HHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe
Confidence 2578999998876 678899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcCcccccccccccccCCccC
Q 003049 828 LNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
++|+|+ +++++|.++.+|+|.+|
T Consensus 663 g~gtdv--AkeaADiVLldd~f~~I 685 (903)
T PRK15122 663 DSGADI--AKESADIILLEKSLMVL 685 (903)
T ss_pred CcccHH--HHHhcCEEEecCChHHH
Confidence 999885 89999999999999865
No 11
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=3.5e-97 Score=916.52 Aligned_cols=647 Identities=22% Similarity=0.264 Sum_probs=494.8
Q ss_pred CCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhh-hcch----------
Q 003049 151 PTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGL-WCLD---------- 216 (853)
Q Consensus 151 ~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~l-w~~~---------- 216 (853)
+.++.++.+.. .+||+++ |+++|+++||+|+++.+.+ ++|.+|.+++++||.+.++++.++ ++..
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~-e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~ 99 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAA-RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEP 99 (997)
T ss_pred CHHHHHHHhCcCcccCCCHH-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 44455666654 4699997 9999999999999987654 699999999999998888777666 3321
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCce
Q 003049 217 --EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKS 293 (853)
Q Consensus 217 --~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~ 293 (853)
.+|+.++++++++++......+|+.|+.+.++++. ..|.+++|+|||++++|+++||||||+|.|++|+ .
T Consensus 100 ~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd-------~ 172 (997)
T TIGR01106 100 QNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGD-------R 172 (997)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCC-------E
Confidence 35777776666666666667778777766666643 3467899999999999999999999999999988 9
Q ss_pred eecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEE
Q 003049 294 VPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL 372 (853)
Q Consensus 294 vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~ 372 (853)
|||||+|++|+ +.||||+|||||.|+.|.+... .+.. .+.+|++|+||.|+ +|.+.++|+
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~--~~~~----~~~~n~l~~Gt~v~-------------~G~~~~~V~ 233 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFT--HENP----LETRNIAFFSTNCV-------------EGTARGIVV 233 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCc--ccCc----cccCCeEEeccEee-------------eeeEEEEEE
Confidence 99999999996 7999999999999999976321 1111 14578999999999 689999999
Q ss_pred eeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHH----HHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCC
Q 003049 373 RTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA----VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPP 448 (853)
Q Consensus 373 ~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~a----i~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~ 448 (853)
+||.+|..|++.+.+....++.++.++....+...+..++ ++.+++++.. +..+...+..++.++++++||
T Consensus 234 ~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~v~v~~iP~ 308 (997)
T TIGR01106 234 NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL-----GYTWLEAVIFLIGIIVANVPE 308 (997)
T ss_pred EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHhhcCCc
Confidence 9999999999999876655555665554444443333332 2222222222 234555677778888888999
Q ss_pred CchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC---ccccc-----cCC-
Q 003049 449 ELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---ELEDD-----MTK- 519 (853)
Q Consensus 449 ~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~---~~~~~-----~~~- 519 (853)
+||++++++...+..+|+|++++++++.++|.+|++|++|||||||||+|+|+|.+++..+.. +.... ...
T Consensus 309 ~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (997)
T TIGR01106 309 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKS 388 (997)
T ss_pred cchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcc
Confidence 999999999999999999999999999999999999999999999999999999998753211 00000 000
Q ss_pred CC--HHHHHHHHHhccceeeC---------CcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCc
Q 003049 520 VP--VRTQEILASCHALVFVD---------NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKR 588 (853)
Q Consensus 520 ~~--~~~~~~la~chsl~~~~---------~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~kr 588 (853)
.. .....+++.||+....+ ....|||+|.|+++++.+...... .....+++++.+||+|++||
T Consensus 389 ~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------~~~~~~~~v~~~pF~s~rK~ 462 (997)
T TIGR01106 389 SATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------EMRERNPKVVEIPFNSTNKY 462 (997)
T ss_pred cHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------HHHhhCceeEEeccCCCCce
Confidence 01 13455678898755432 135799999999998764321110 01234677889999999999
Q ss_pred eEEEEEeC----CEEEEEEcCcHHHHHHhhccC-------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhh
Q 003049 589 MSVVVRVQ----EEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDA 651 (853)
Q Consensus 589 msvi~~~~----~~~~~~~KGapE~i~~~~~~i-------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~ 651 (853)
|++++... +++++++|||||.|+++|+.+ ++.+.+.+++|+++|+||+|+|||.++..+..+.
T Consensus 463 m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~ 542 (997)
T TIGR01106 463 QLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEG 542 (997)
T ss_pred EEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccc
Confidence 99988642 368899999999999999532 2346777889999999999999999875322111
Q ss_pred hhhcHH---hhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCc
Q 003049 652 RSLHRD---EVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGK 728 (853)
Q Consensus 652 ~~~~r~---~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~ 728 (853)
...+++ ..|+||+|+|+++++||+|+|++++|++|+++|++++|+|||++.||.++|+++||++++....
T Consensus 543 ~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~------- 615 (997)
T TIGR01106 543 FQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV------- 615 (997)
T ss_pred ccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch-------
Confidence 112222 3489999999999999999999999999999999999999999999999999999985421100
Q ss_pred eeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccc--eEEEeeChhhHHHHHHHHHHcCCEEE
Q 003049 729 VYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRMTL 806 (853)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~g~~v~ 806 (853)
.++++. ....... ........++++|.+++.+.+ +++.+++.++ .||||++|+||.+||+.||+.|++|+
T Consensus 616 ----~~i~~~--~~~~~~~-~~~~~~~~~vi~G~~l~~l~~-~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~ 687 (997)
T TIGR01106 616 ----EDIAAR--LNIPVSQ-VNPRDAKACVVHGSDLKDMTS-EQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVA 687 (997)
T ss_pred ----hhhhhh--ccccccc-cccccccceEEEhHHhhhCCH-HHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEE
Confidence 000000 0000000 000122358999999999876 4677777765 49999999999999999999999999
Q ss_pred EEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 807 MCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 807 m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+|||+||+||||+|||||||| +|+|+ +++++|.++.+|+|.+|
T Consensus 688 ~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~I 732 (997)
T TIGR01106 688 VTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASI 732 (997)
T ss_pred EECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHH
Confidence 9999999999999999999999 68886 78899999999999875
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.3e-96 Score=884.52 Aligned_cols=571 Identities=23% Similarity=0.272 Sum_probs=464.1
Q ss_pred CCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003049 164 GHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 243 (853)
Q Consensus 164 GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~ 243 (853)
|||++ |+++|+++||+|++..+.+++|.+|.+++.+||.++++++.++.+....|..++++++++++......+|++++
T Consensus 1 GLs~~-ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 1 GLTSA-EAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALENWVDFVIILGLLLLNATIGFIEENKA 79 (755)
T ss_pred CcCHH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhcchhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 89987 99999999999999987788899999999999977666655554444456666666666666666677777776
Q ss_pred HHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce-eEEeeccCCCCcccccc
Q 003049 244 LTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWK 321 (853)
Q Consensus 244 ~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K 321 (853)
.+.++++. ..|.+++|+|||+|++|+++||+|||+|.|++|+ +|||||+|++|+ +.||||+|||||.|+.|
T Consensus 80 ~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd-------~IPaDg~vi~g~~~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGD-------IVPADCRLFEGDYIQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCC-------EEeceEEEEecCceEEEcccccCCccceEe
Confidence 66665543 3467899999999999999999999999999988 999999999997 99999999999999999
Q ss_pred ccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhH
Q 003049 322 VSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWES 401 (853)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~ 401 (853)
.+ ++.+|+||.|. +|.+.++|++||.+|..|++.+.+...++..++.++..
T Consensus 153 ~~----------------~~~v~aGT~v~-------------~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~ 203 (755)
T TIGR01647 153 KT----------------GDIAYSGSTVK-------------QGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKIL 203 (755)
T ss_pred cc----------------CCeeeccCEEE-------------ccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHH
Confidence 75 67899999999 79999999999999999999998877665555655554
Q ss_pred HHHHHHH----HHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCC
Q 003049 402 GLFILFL----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFR 477 (853)
Q Consensus 402 ~~fi~~l----l~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ 477 (853)
..+...+ ++++++.+++++... +.++...+..++.+++++|||+||+++++++..+..+|+|+|++++++..
T Consensus 204 ~~i~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~a 279 (755)
T TIGR01647 204 SKIGLFLIVLIGVLVLIELVVLFFGR----GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTA 279 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHH
Confidence 4433333 333333222222211 24566778888999999999999999999999999999999999999999
Q ss_pred cccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCce
Q 003049 478 IPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWS 557 (853)
Q Consensus 478 i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~ 557 (853)
+|.+|++|++|||||||||+|+|+|.+++..++. ..+.+.+...+.|.. +..+||+|+|+++++...
T Consensus 280 lE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------~~~~~~l~~a~~~~~------~~~~~pi~~Ai~~~~~~~ 346 (755)
T TIGR01647 280 IEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-------FDKDDVLLYAALASR------EEDQDAIDTAVLGSAKDL 346 (755)
T ss_pred HHhccCCcEEEecCCCccccCceEEEEEEecCCC-------CCHHHHHHHHHHhCC------CCCCChHHHHHHHHHHHh
Confidence 9999999999999999999999999999864321 011222333333321 346899999999875421
Q ss_pred eccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe--CCEEEEEEcCcHHHHHHhhcc---CChhHHHHHHHHHhcc
Q 003049 558 YKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV--QEEFFAFVKGAPETIQDRLTD---LPSSYIETYKKYTHQG 632 (853)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~--~~~~~~~~KGapE~i~~~~~~---ip~~~~~~~~~~~~~G 632 (853)
+. ....+++.+.+||+|.+|+|+++++. +++.++++|||||.++++|.. .++.+.+..++++++|
T Consensus 347 ---~~-------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G 416 (755)
T TIGR01647 347 ---KE-------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRG 416 (755)
T ss_pred ---HH-------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCC
Confidence 00 01235678899999999999999876 366788999999999999954 3567788889999999
Q ss_pred ceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcC
Q 003049 633 SRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (853)
Q Consensus 633 ~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~g 712 (853)
+||+++|||+ .|++|+|+|+++|+||+|||++++|++||++|++++|+||||+.||.+||+++|
T Consensus 417 ~rvl~vA~~~----------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lG 480 (755)
T TIGR01647 417 YRALGVARTD----------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLG 480 (755)
T ss_pred CEEEEEEEEc----------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 9999999972 257899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHH
Q 003049 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKE 792 (853)
Q Consensus 713 I~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~ 792 (853)
|.+. +.+. +-..+|+.++.+.+ +++.++++++.||||++|+||.
T Consensus 481 I~~~---~~~~--------------------------------~~l~~~~~~~~~~~-~~~~~~~~~~~vfAr~~Pe~K~ 524 (755)
T TIGR01647 481 LGTN---IYTA--------------------------------DVLLKGDNRDDLPS-GELGEMVEDADGFAEVFPEHKY 524 (755)
T ss_pred CCCC---CcCH--------------------------------HHhcCCcchhhCCH-HHHHHHHHhCCEEEecCHHHHH
Confidence 9642 0000 00122333333332 5678888899999999999999
Q ss_pred HHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 793 LILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 793 ~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
++|+.||+.|++|+|+|||+||+||||+|||||||++|+|. +++++|.++.+++|.+|
T Consensus 525 ~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I 582 (755)
T TIGR01647 525 EIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVI 582 (755)
T ss_pred HHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHH
Confidence 99999999999999999999999999999999999998885 89999999999999765
No 13
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.1e-95 Score=895.93 Aligned_cols=611 Identities=21% Similarity=0.283 Sum_probs=491.8
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHh-hchhHHHHHhhhhhhcchhhHHHHHHH
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENC-MEPFFVFQVFCVGLWCLDEYWYYSLFT 225 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~-~~pf~vf~i~~~~lw~~~~y~~~s~~~ 225 (853)
.+.++.++.++. .+||++++|+++|+++||+|+++.|. +++|.+|++++ .+||+++++++++++++.+.|..++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~~~~i 86 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDDAVSI 86 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhhHHHH
Confidence 345556677764 46999434999999999999999875 68999999999 899999999999888877777777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce
Q 003049 226 LFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304 (853)
Q Consensus 226 l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~ 304 (853)
++++++......+|++++.+.++++. ..|.+++|+|||++++|+++||||||+|.+++|+ .|||||+|++|+
T Consensus 87 ~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd-------~IPaDg~ii~g~ 159 (884)
T TIGR01522 87 TLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGD-------RVPADLRIVEAV 159 (884)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCC-------EEeeeEEEEEcC
Confidence 66666555666667776666666643 3467899999999999999999999999999988 999999999995
Q ss_pred -eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHH
Q 003049 305 -AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (853)
Q Consensus 305 -~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l 383 (853)
+.||||+|||||.|+.|.+.+.... ......+++|.+|+||.|. +|.+.++|++||.+|..|++
T Consensus 160 ~l~VDES~LTGES~pv~K~~~~~~~~--~~~~~~~~~n~v~~GT~v~-------------~G~~~~~V~~tG~~T~~gki 224 (884)
T TIGR01522 160 DLSIDESNLTGETTPVSKVTAPIPAA--TNGDLAERSNIAFMGTLVR-------------CGHGKGIVVGTGSNTEFGAV 224 (884)
T ss_pred ceEEEcccccCCCcceeccccccccc--ccccccccCceEEeCCEEE-------------eeeEEEEEEEecCccHHHHH
Confidence 8999999999999999987432111 1112236789999999998 69999999999999999999
Q ss_pred HHHhccccccCCcchhhHHHHHHHHHHHH----HHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHH
Q 003049 384 MRTILFSTERVTANSWESGLFILFLVVFA----VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVN 459 (853)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi~~ll~~a----i~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~ 459 (853)
.+.+....+.+++.++....+...+..++ ++.++..|.. +.++...+..++.+++++|||+||+++++++.
T Consensus 225 ~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~ 299 (884)
T TIGR01522 225 FKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ-----GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLA 299 (884)
T ss_pred HHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 99988766666766655444433222221 1112222222 23456778888899999999999999999999
Q ss_pred HHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCc-cc-----cccC-----------CCC-
Q 003049 460 TSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LE-----DDMT-----------KVP- 521 (853)
Q Consensus 460 ~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~-~~-----~~~~-----------~~~- 521 (853)
.++.+|+|++++++++..+|.+|++|++|||||||||+|+|+|.+++..++.. .. .... ..+
T Consensus 300 ~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (884)
T TIGR01522 300 LGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTV 379 (884)
T ss_pred HHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCH
Confidence 99999999999999999999999999999999999999999999997543210 00 0000 001
Q ss_pred --HHHHHHHHHhccceee--CCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe--
Q 003049 522 --VRTQEILASCHALVFV--DNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-- 595 (853)
Q Consensus 522 --~~~~~~la~chsl~~~--~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-- 595 (853)
...+...+.||+.... +++..|||+|+|+++++... +.+. ....++.++++||+|++|||+++++.
T Consensus 380 ~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~-~~~~-------~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 380 AVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF-GLDD-------LRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred HHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHc-CcHh-------HHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 1233455678876443 24677999999999986432 1000 01246788999999999999999887
Q ss_pred CCEEEEEEcCcHHHHHHhhccC----------C----hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhc
Q 003049 596 QEEFFAFVKGAPETIQDRLTDL----------P----SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVEN 661 (853)
Q Consensus 596 ~~~~~~~~KGapE~i~~~~~~i----------p----~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~ 661 (853)
++++++++|||||.|+.+|... . +.+.+..++|+++|+||+++|||.+ +.
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------~~ 515 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------KG 515 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------CC
Confidence 5678999999999999999531 1 2456677889999999999999875 35
Q ss_pred CcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCccccc
Q 003049 662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKI 741 (853)
Q Consensus 662 dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~ 741 (853)
+|+|+|+++|+||+|||++++|++|+++|++++|+|||++.||.++|+++||...
T Consensus 516 ~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~------------------------- 570 (884)
T TIGR01522 516 QLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK------------------------- 570 (884)
T ss_pred CeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-------------------------
Confidence 8999999999999999999999999999999999999999999999999999743
Q ss_pred ccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhC
Q 003049 742 QYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 742 ~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~A 821 (853)
...+++|++++.+.+ +++.+++.++.||||++|+||..+|+.||+.|+.|+|+|||+||+||||+|
T Consensus 571 -------------~~~~v~g~~l~~~~~-~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~A 636 (884)
T TIGR01522 571 -------------TSQSVSGEKLDAMDD-QQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLA 636 (884)
T ss_pred -------------CCceeEhHHhHhCCH-HHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhC
Confidence 112578999988765 678888999999999999999999999999999999999999999999999
Q ss_pred CceEEec-cCCCcCcccccccccccccCCccC
Q 003049 822 HVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 822 dVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||||||| +|++. ++.++|..+.+++|.+|
T Consensus 637 dVGia~g~~g~~v--a~~aaDivl~dd~~~~i 666 (884)
T TIGR01522 637 DIGVAMGQTGTDV--AKEAADMILTDDDFATI 666 (884)
T ss_pred CeeEecCCCcCHH--HHHhcCEEEcCCCHHHH
Confidence 9999998 57774 77889999999998764
No 14
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-94 Score=808.44 Aligned_cols=611 Identities=22% Similarity=0.293 Sum_probs=483.9
Q ss_pred cCCCCc-HHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcc--------hhhHHHHHHHHHHH--
Q 003049 162 CTGHST-EAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL--------DEYWYYSLFTLFML-- 229 (853)
Q Consensus 162 ~~GLs~-~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~--------~~y~~~s~~~l~~l-- 229 (853)
..|++. ++++.+|++.||.|.++.++ ++|+.+.+|.+.+...+++.+|.++.+. .+.||.+..+++.+
T Consensus 115 ~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~ 194 (1034)
T KOG0204|consen 115 NEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVIL 194 (1034)
T ss_pred ccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEE
Confidence 468876 34899999999999998765 4899999999999988777766655432 34588776655432
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecc-eeEE
Q 003049 230 -FMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-SAIV 307 (853)
Q Consensus 230 -v~~~~~~~~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G-~~~V 307 (853)
++..+..-|++.+..+.|++.. .+.++.|+|||+.++|+..|||+|||+.++.|+ .|||||++++| ++.+
T Consensus 195 VV~VtA~nDy~qe~QF~~L~~~k-~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GD-------qvPADGvli~gn~L~i 266 (1034)
T KOG0204|consen 195 VVLVTAVNDYRQELQFRKLQKEK-RNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGD-------QVPADGVLIQGNSLKI 266 (1034)
T ss_pred EEEEeecchhHHhhhhhhhhhhh-hceEEEEEECCEEEEEEEeeeeeccEEEeecCC-------ccccceEEEeccceeE
Confidence 2334555666666666666432 347899999999999999999999999999987 99999999999 6899
Q ss_pred eeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHh
Q 003049 308 NEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTI 387 (853)
Q Consensus 308 dES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i 387 (853)
|||+|||||.++.|.+ +++.+|++||+++ +|.+.++|+.+|.+|..|+++.++
T Consensus 267 DESSlTGESd~v~k~~--------------~~dPfLlSGTkv~-------------eGsgkMlVTaVGmnt~wG~~m~~l 319 (1034)
T KOG0204|consen 267 DESSLTGESDHVQKSL--------------DKDPFLLSGTKVM-------------EGSGKMLVTAVGMNTQWGIIMTLL 319 (1034)
T ss_pred ecccccCCCcceeccC--------------CCCCeEeecceee-------------cCcceEEEEEeeecchHhhHHHhh
Confidence 9999999999999975 2467999999999 899999999999999999999988
Q ss_pred ccccccCCcchhhHHHHHH----HHHHHHHHHHhhh----hhhcccCCCc-----------hhhHHHHHhheeeEeecCC
Q 003049 388 LFSTERVTANSWESGLFIL----FLVVFAVIAAGYV----LKKGMEDPTR-----------SKYKLFLSCSLIITSVIPP 448 (853)
Q Consensus 388 ~~~~~~~~~~~~~~~~fi~----~ll~~ai~~~~~~----~~~~~~~~~~-----------~~~~~~l~~~~ii~~~vP~ 448 (853)
....+..++.+........ +-+.+|.+.++.+ +.......++ .+.+.|..++.+++.+||+
T Consensus 320 ~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPE 399 (1034)
T KOG0204|consen 320 GAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPE 399 (1034)
T ss_pred hcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCC
Confidence 7776666766543322211 1122222222111 1111111011 1234567788899999999
Q ss_pred CchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCcccccc--CCCCHHHHH
Q 003049 449 ELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDM--TKVPVRTQE 526 (853)
Q Consensus 449 ~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~--~~~~~~~~~ 526 (853)
+||++++++.++|+.+|.|.+.+++...+.|++|..+++|.|||||||.|+|+|...+........... +.+|.....
T Consensus 400 GLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ 479 (1034)
T KOG0204|consen 400 GLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLD 479 (1034)
T ss_pred CccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987765443221111 346655443
Q ss_pred HHH------HhccceeeC-C----cccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe
Q 003049 527 ILA------SCHALVFVD-N----KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV 595 (853)
Q Consensus 527 ~la------~chsl~~~~-~----~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~ 595 (853)
++- ++.++..-+ | +.+|+|.|+|+|.+... ++.+.... +....+.+.+||+|.+|||+++++.
T Consensus 480 ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~-LG~~~~~~-----R~e~~v~kv~~FNS~kK~~gvvi~~ 553 (1034)
T KOG0204|consen 480 LLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLK-LGMDFQDV-----RPEEKVVKVYPFNSVKKRMGVVIKL 553 (1034)
T ss_pred HHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHH-hCcchHhh-----cchhheeEEeccCcccceeeEEEEc
Confidence 332 333333322 2 58999999999987532 33322111 1456789999999999999999997
Q ss_pred CCEE-EEEEcCcHHHHHHhhccC--------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhh
Q 003049 596 QEEF-FAFVKGAPETIQDRLTDL--------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVE 660 (853)
Q Consensus 596 ~~~~-~~~~KGapE~i~~~~~~i--------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E 660 (853)
.++. ++++|||+|.++.+|..+ ...+++.++.|+.+|+|++|+|||++.....++.+.-+.+..+
T Consensus 554 ~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~ 633 (1034)
T KOG0204|consen 554 PDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPE 633 (1034)
T ss_pred CCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCC
Confidence 4433 499999999999999653 1357788999999999999999999754311111222235678
Q ss_pred cCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccc
Q 003049 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEK 740 (853)
Q Consensus 661 ~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~ 740 (853)
.+|+++|+++++||+|||++++|+.|++||+.|.|+||||..||++||++|||.+++
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~----------------------- 690 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPG----------------------- 690 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCC-----------------------
Confidence 899999999999999999999999999999999999999999999999999999641
Q ss_pred cccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHh
Q 003049 741 IQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQ 820 (853)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~ 820 (853)
...++++|.+|+.+.+ +++.+++++.+|+||.||.||..+|+.|+++|++|+.+|||+||+||||.
T Consensus 691 -------------~d~~~lEG~eFr~~s~-ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALke 756 (1034)
T KOG0204|consen 691 -------------GDFLALEGKEFRELSQ-EERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKE 756 (1034)
T ss_pred -------------CccceecchhhhhcCH-HHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhh
Confidence 1357999999998877 68899999999999999999999999999999999999999999999999
Q ss_pred CCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 821 AHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 821 AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||||.||| .|||+ |+.++|+++.||||.||
T Consensus 757 ADVGlAMGIaGTeV--AKEaSDIIi~DDNFssI 787 (1034)
T KOG0204|consen 757 ADVGLAMGIAGTEV--AKEASDIIILDDNFSSI 787 (1034)
T ss_pred cccchhccccchhh--hhhhCCeEEEcCchHHH
Confidence 99999999 88997 99999999999999986
No 15
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=7.9e-89 Score=836.93 Aligned_cols=599 Identities=23% Similarity=0.303 Sum_probs=461.7
Q ss_pred HHHHhhchhHHHHHhhhhhhcch----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEEC
Q 003049 194 MKENCMEPFFVFQVFCVGLWCLD----------EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRC 262 (853)
Q Consensus 194 ~~~~~~~pf~vf~i~~~~lw~~~----------~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~ 262 (853)
+++++.+|+.++.+++.++.+.. ..|+.++++++++++......+|++|+.+.++++. ..+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 35788999988877776665443 24777777777777777777888877766666653 34678999999
Q ss_pred CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCe
Q 003049 263 GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSH 341 (853)
Q Consensus 263 g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~ 341 (853)
|++++|+++||||||+|.+++|+ .|||||+|++|+ +.||||+|||||.|+.|.+.+..+.+ ....+++|
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd-------~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~---~~~~~~~n 150 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGD-------KVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDER---AVNQDKKN 150 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCC-------EeeccEEEEEecceEEEcccccCCCCcccccccccCccc---cCcccccc
Confidence 99999999999999999999988 999999999995 99999999999999999864321111 11235679
Q ss_pred EEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHH----HHHHHHh
Q 003049 342 VLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVV----FAVIAAG 417 (853)
Q Consensus 342 ~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~----~ai~~~~ 417 (853)
++|+||.|. +|.+.++|++||.+|..|++.+.+...+++.++.++....+...+.. ++++.++
T Consensus 151 ~l~~GT~v~-------------~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~ 217 (917)
T TIGR01116 151 MLFSGTLVV-------------AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWV 217 (917)
T ss_pred eeeeCCEEe-------------cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 69999999999999999999999888777777776655444333222 2222222
Q ss_pred hhhhhccc-CCCchh----hHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCC
Q 003049 418 YVLKKGME-DPTRSK----YKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492 (853)
Q Consensus 418 ~~~~~~~~-~~~~~~----~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKT 492 (853)
+.+..... .....+ ...+..++.++++++|++||++++++...+..+|+|++++++++..+|.+|++|++|||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKT 297 (917)
T TIGR01116 218 INIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKT 297 (917)
T ss_pred HHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCC
Confidence 11111000 001111 2334456778889999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEEEEecCCCc----------ccc-c----cCC-------C---CHHHHHHHHHhccceeeC----C--cc
Q 003049 493 GTLTSDDMEFRGVVGLSNAE----------LED-D----MTK-------V---PVRTQEILASCHALVFVD----N--KL 541 (853)
Q Consensus 493 GTLT~~~~~v~~i~~~~~~~----------~~~-~----~~~-------~---~~~~~~~la~chsl~~~~----~--~~ 541 (853)
||||+|+|+|.+++..++.. ... + ..+ . ......+++.||...... + +.
T Consensus 298 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~ 377 (917)
T TIGR01116 298 GTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK 377 (917)
T ss_pred ccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee
Confidence 99999999999997643210 000 0 000 0 122455678899765431 1 24
Q ss_pred cCCHHHHHHHhhcC---ceeccCc--cc-ccCC----CCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHH
Q 003049 542 VGDPLEKAALKGID---WSYKSDE--KA-MPKR----GGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (853)
Q Consensus 542 ~gdple~a~l~~~~---~~~~~~~--~~-~~~~----~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~ 611 (853)
.|||+|.|+++++. ....... .. .... .....+++++.+||+|++|||||+++.++++++++|||||.|+
T Consensus 378 ~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il 457 (917)
T TIGR01116 378 VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVL 457 (917)
T ss_pred ccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHH
Confidence 69999999998753 1111100 00 0000 0123567899999999999999999987888999999999999
Q ss_pred HhhccC--------C------hhHHHHHHHHHh-ccceEEEEEeeeCCCCChh--hhhhhcHHhhhcCcceeeEeeecCC
Q 003049 612 DRLTDL--------P------SSYIETYKKYTH-QGSRVLALAFKSLPDMTVS--DARSLHRDEVENGLTFAGFAVFNCP 674 (853)
Q Consensus 612 ~~~~~i--------p------~~~~~~~~~~~~-~G~rvlala~k~l~~~~~~--~~~~~~r~~~E~dl~f~G~l~~~d~ 674 (853)
++|+.. | +.+.+..++|++ +|+||+|+|||.++..... ......++++|+||+|+|+++|+||
T Consensus 458 ~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dp 537 (917)
T TIGR01116 458 ERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDP 537 (917)
T ss_pred HhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCC
Confidence 999642 1 235667889999 9999999999998642211 0112345678999999999999999
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (853)
+|++++++|++|+++|++++|+|||++.||.++|+++||..++.. .
T Consensus 538 lr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~----------------------------------v 583 (917)
T TIGR01116 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED----------------------------------V 583 (917)
T ss_pred CchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc----------------------------------c
Confidence 999999999999999999999999999999999999999843110 0
Q ss_pred eeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
....++|.+++.+.+ +++.+...++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||++|++.
T Consensus 584 ~~~~~~g~~l~~~~~-~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~- 661 (917)
T TIGR01116 584 TFKSFTGREFDEMGP-AKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV- 661 (917)
T ss_pred cceeeeHHHHhhCCH-HHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHH-
Confidence 134688999888765 456777888899999999999999999999999999999999999999999999999988875
Q ss_pred cccccccccccccCCccC
Q 003049 835 QSGNSSSEASKDENTKSV 852 (853)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~ 852 (853)
+++++|.++.+|+|.+|
T Consensus 662 -ak~aAD~vl~dd~f~~i 678 (917)
T TIGR01116 662 -AKEASDMVLADDNFATI 678 (917)
T ss_pred -HHHhcCeEEccCCHHHH
Confidence 78889999999999765
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.4e-82 Score=791.59 Aligned_cols=638 Identities=21% Similarity=0.278 Sum_probs=446.8
Q ss_pred cCCcccccCCccH----HHHHHHHhhchhHHHHHhhhhhhcchh----hHHHHHHHHHHHH-HH---HHHHHHHHHHHHH
Q 003049 178 WGRNVFEYPQPTF----QKLMKENCMEPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLF-MF---ESTMAKSRLKTLT 245 (853)
Q Consensus 178 yG~N~~~~~~~~~----~~l~~~~~~~pf~vf~i~~~~lw~~~~----y~~~s~~~l~~lv-~~---~~~~~~~~~k~~~ 245 (853)
|..|.+...+.++ +..|++|+..|+.++.++..++-+... .+...++.+++++ +. +....++|.++-
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d- 79 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRD- 79 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhH-
Confidence 5678887777654 478889999998776665555544321 2222233333222 22 222233333333
Q ss_pred HHHhhhcCCceEEEEEC-CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCCCcccc
Q 003049 246 EIRRVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQ 319 (853)
Q Consensus 246 ~l~~m~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~Pv 319 (853)
+++ .+..++|+|+ |++++|+++||+|||+|.|++|| .||||++|++ |.|.||||+|||||.|+
T Consensus 80 --~~~--n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~-------~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 80 --KEV--NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDE-------RIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred --HHH--hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCC-------cccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 222 3468999997 89999999999999999999988 9999999997 77999999999999999
Q ss_pred ccccccCCCC----Cc------ccccc----------------------CCCCeEEEeceEEeecCCCCCCCCCCCCCcE
Q 003049 320 WKVSIMGRET----GE------KLSAR----------------------RDKSHVLFGGTKILQHTPDKTFPLKTPDGGC 367 (853)
Q Consensus 320 ~K~~~~~~~~----~~------~~~~~----------------------~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~ 367 (853)
.|.+.+.... ++ .+..+ -+..|+++.||.+.. .|++
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~n------------t~~~ 216 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRN------------TDWV 216 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecC------------CCeE
Confidence 9987542110 00 00000 023466677777652 4899
Q ss_pred EEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHH----HHhh--hhhhcc-c-CC-----------C
Q 003049 368 LAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVI----AAGY--VLKKGM-E-DP-----------T 428 (853)
Q Consensus 368 ~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~----~~~~--~~~~~~-~-~~-----------~ 428 (853)
.|+|++||.+|..++ ....+..+.+..++....++.++++++++ ++++ +|.... . .. .
T Consensus 217 ~gvVvyTG~~Tk~~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~ 293 (1057)
T TIGR01652 217 IGVVVYTGHDTKLMR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAA 293 (1057)
T ss_pred EEEEEEEchhhhhhh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccch
Confidence 999999999996655 33344455677776666665544433322 2221 121100 0 00 0
Q ss_pred chhhHHHHHhheeeEeecCCCchHHHHHHHHHHH------HHHHhc----ceeccCCCCcccCccccEEEeCCCCcccCC
Q 003049 429 RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL------IALARR----GIFCTEPFRIPFAGKVDMCCFDKTGTLTSD 498 (853)
Q Consensus 429 ~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~------~~l~k~----~I~~~~~~~i~~lG~vd~icfDKTGTLT~~ 498 (853)
......++.++.++..++|.+||+.++++..... .+|.++ ++.+++...+|.||+|+++|+|||||||+|
T Consensus 294 ~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N 373 (1057)
T TIGR01652 294 ANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQN 373 (1057)
T ss_pred hHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeee
Confidence 1122256778888899999999999998877776 567653 589999999999999999999999999999
Q ss_pred CeEEEEEEecCCC-----c--------ccc-----------c--------------c--C-CC---CHHHHHHHHHhccc
Q 003049 499 DMEFRGVVGLSNA-----E--------LED-----------D--------------M--T-KV---PVRTQEILASCHAL 534 (853)
Q Consensus 499 ~~~v~~i~~~~~~-----~--------~~~-----------~--------------~--~-~~---~~~~~~~la~chsl 534 (853)
+|+++++...+.. . ... . . . +. -.+...+++.||++
T Consensus 374 ~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v 453 (1057)
T TIGR01652 374 IMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTV 453 (1057)
T ss_pred eEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcc
Confidence 9999998642210 0 000 0 0 0 00 12345688999998
Q ss_pred eee--CCc------ccCCHHHHHHHhhc---CceeccCcc-----cccCCCCCcceEEEEEecCCCCCCceEEEEEeC-C
Q 003049 535 VFV--DNK------LVGDPLEKAALKGI---DWSYKSDEK-----AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-E 597 (853)
Q Consensus 535 ~~~--~~~------~~gdple~a~l~~~---~~~~~~~~~-----~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~-~ 597 (853)
... ++. ..|+|.|.|+++++ ++.+...+. .....+....+++++.+||+|++|||||+++.+ +
T Consensus 454 ~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~ 533 (1057)
T TIGR01652 454 VPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG 533 (1057)
T ss_pred cccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC
Confidence 654 211 15899999999875 454432211 111223345799999999999999999999984 4
Q ss_pred EEEEEEcCcHHHHHHhhccC----ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhh-----------------hhcH
Q 003049 598 EFFAFVKGAPETIQDRLTDL----PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR-----------------SLHR 656 (853)
Q Consensus 598 ~~~~~~KGapE~i~~~~~~i----p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~-----------------~~~r 656 (853)
++++++|||||.|.++|... ++.+.+.+++|+++|+||+++|||.+++.+..++. ...+
T Consensus 534 ~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~ 613 (1057)
T TIGR01652 534 RIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVA 613 (1057)
T ss_pred eEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 68999999999999999753 35677889999999999999999999764332221 0112
Q ss_pred HhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeE--EEccCCCCceeEeec
Q 003049 657 DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL--ILCPVKNGKVYEWVS 734 (853)
Q Consensus 657 ~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~--il~~~~~~~~~~~~~ 734 (853)
+++|+||+|+|+++++||||+|++++|+.|++|||++||+|||+++||++||++|||++++.. +++.+... .+..
T Consensus 614 ~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~---~~~~ 690 (1057)
T TIGR01652 614 ESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLD---ATRS 690 (1057)
T ss_pred HHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchh---hhHH
Confidence 568999999999999999999999999999999999999999999999999999999975432 22221100 0000
Q ss_pred CCccccccc----chhhhccccCceeEEEehhhhHHhhcch---hHHhhcccc--eEEEeeChhhHHHHHHHHHHc-CCE
Q 003049 735 PDETEKIQY----SEKEVEGLTDAHDLCIGGDCFEMLQQTS---AVLRVIPYV--KVFARVAPEQKELILTTFKAV-GRM 804 (853)
Q Consensus 735 ~~~~~~~~~----~~~~~~~~~~~~~l~itG~~l~~l~~~~---~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~-g~~ 804 (853)
.++...... ..........++.++++|++++.+.+++ .+.+++.++ .||||++|+||.+||+.+|+. |++
T Consensus 691 ~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~ 770 (1057)
T TIGR01652 691 VEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKT 770 (1057)
T ss_pred HHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCe
Confidence 000000000 0000011134567899999999877643 456666655 499999999999999999998 999
Q ss_pred EEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 805 TLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 805 v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
|+|+|||+||+||||+|||||++ .|++..+|..++|.++.+
T Consensus 771 vl~iGDG~ND~~mlk~AdVGIgi-~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 771 TLAIGDGANDVSMIQEADVGVGI-SGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred EEEEeCCCccHHHHhhcCeeeEe-cChHHHHHHHhhhhhhhh
Confidence 99999999999999999999988 466655788889998876
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2e-80 Score=724.02 Aligned_cols=455 Identities=20% Similarity=0.236 Sum_probs=360.0
Q ss_pred HHHHHHHhhhcCCceEE-EEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccc
Q 003049 242 KTLTEIRRVRVDNQTIM-VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQW 320 (853)
Q Consensus 242 k~~~~l~~m~~~~~~v~-V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~ 320 (853)
+++++|+++.. +.+++ |.|||++++|++++|+|||+|.+++|| .|||||++++|.+.||||+|||||.|+.
T Consensus 92 ~~~~~L~~~~~-~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd-------~IPaDG~vieG~~~VDESaLTGES~PV~ 163 (673)
T PRK14010 92 AQANALRQTQT-EMKARRIKQDGSYEMIDASDLKKGHIVRVATGE-------QIPNDGKVIKGLATVDESAITGESAPVI 163 (673)
T ss_pred HHHHHHHcCCC-cceEEEEEeCCEEEEEEHHHcCCCCEEEECCCC-------cccCCeEEEEcceEEecchhcCCCCcee
Confidence 34455555432 22565 779999999999999999999999988 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhh
Q 003049 321 KVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE 400 (853)
Q Consensus 321 K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~ 400 (853)
|++- +++ +.+|+||.|. +|.+.++|++||.+|..|++++.+..+++++++++..
T Consensus 164 K~~g------------~d~-~~V~aGT~v~-------------~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~ 217 (673)
T PRK14010 164 KESG------------GDF-DNVIGGTSVA-------------SDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIA 217 (673)
T ss_pred ccCC------------Ccc-CeeecCceee-------------cceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHH
Confidence 9861 122 3499999999 7999999999999999999999998777777777654
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCccc
Q 003049 401 SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480 (853)
Q Consensus 401 ~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~ 480 (853)
...+...+.+++++...+++..... ..+...+...+.++++++|++||..++++...++.+|+|+|++++++..+|.
T Consensus 218 l~~l~~~l~ii~l~~~~~~~~~~~~---~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~ 294 (673)
T PRK14010 218 LFTLLMTLTIIFLVVILTMYPLAKF---LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVET 294 (673)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHH
Confidence 4333322222222211111111100 0112233344445556689999999999999999999999999999999999
Q ss_pred CccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceecc
Q 003049 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKS 560 (853)
Q Consensus 481 lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~ 560 (853)
+|++|++|||||||||+|++.+..+.+.++. ...+.....+.|.. ...||+++|+++++... +.
T Consensus 295 lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~--------~~~~ll~~a~~~~~-------~s~~P~~~AIv~~a~~~-~~ 358 (673)
T PRK14010 295 CGDVNVLILDKTGTITYGNRMADAFIPVKSS--------SFERLVKAAYESSI-------ADDTPEGRSIVKLAYKQ-HI 358 (673)
T ss_pred hhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc--------cHHHHHHHHHHhcC-------CCCChHHHHHHHHHHHc-CC
Confidence 9999999999999999998888776643221 11122233333431 23599999999876421 00
Q ss_pred CcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHHHHHHHhccceEE
Q 003049 561 DEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQGSRVL 636 (853)
Q Consensus 561 ~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~~~~~~~~G~rvl 636 (853)
+. .....+..||++++|+|++.+ +++ .+.|||||.+.++|. .+|.++++..++++++|+|++
T Consensus 359 ~~----------~~~~~~~~pF~~~~k~~gv~~--~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l 424 (673)
T PRK14010 359 DL----------PQEVGEYIPFTAETRMSGVKF--TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPL 424 (673)
T ss_pred Cc----------hhhhcceeccccccceeEEEE--CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEE
Confidence 00 001123479999999999874 343 355999999999995 356677888889999999999
Q ss_pred EEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC
Q 003049 637 ALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (853)
Q Consensus 637 ala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~ 716 (853)
+++. |++|+|++.|+||+|||++++|++||++|++++|+||||+.||.+||+++||.
T Consensus 425 ~v~~---------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~-- 481 (673)
T PRK14010 425 VVLE---------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD-- 481 (673)
T ss_pred EEEE---------------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--
Confidence 8753 67899999999999999999999999999999999999999999999999996
Q ss_pred CeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHH
Q 003049 717 PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILT 796 (853)
Q Consensus 717 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~ 796 (853)
.+|||++|+||.++|+
T Consensus 482 ----------------------------------------------------------------~v~A~~~PedK~~iV~ 497 (673)
T PRK14010 482 ----------------------------------------------------------------RFVAECKPEDKINVIR 497 (673)
T ss_pred ----------------------------------------------------------------eEEcCCCHHHHHHHHH
Confidence 5899999999999999
Q ss_pred HHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 797 TFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 797 ~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
.||++|++|+|+|||+||+||||+|||||||++|++. +++++|.++.+++|.+|
T Consensus 498 ~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~I 551 (673)
T PRK14010 498 EEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKL 551 (673)
T ss_pred HHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHH
Confidence 9999999999999999999999999999999999995 99999999999998765
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.4e-80 Score=722.75 Aligned_cols=462 Identities=20% Similarity=0.237 Sum_probs=369.4
Q ss_pred HHHHHHHHHHHHHhhhc-CC-ceEEEEECCE-EEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccC
Q 003049 236 MAKSRLKTLTEIRRVRV-DN-QTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAIL 312 (853)
Q Consensus 236 ~~~~~~k~~~~l~~m~~-~~-~~v~V~R~g~-~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~L 312 (853)
..+++.|+.+.++.+.. .| .+++|+|||+ +++|++++|+|||+|.|++|| .|||||++++|.+.||||+|
T Consensus 83 e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd-------~IPaDG~vieG~a~VDESaL 155 (679)
T PRK01122 83 EALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGE-------IIPADGEVIEGVASVDESAI 155 (679)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCC-------EEEEEEEEEEccEEEEcccc
Confidence 34555555444444322 34 3699999988 999999999999999999988 99999999999999999999
Q ss_pred CCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccc
Q 003049 313 TGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTE 392 (853)
Q Consensus 313 TGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~ 392 (853)
||||.|+.|++- +..+.+|+||.|+ +|.+.++|+++|.+|..|++++.+...+.
T Consensus 156 TGES~PV~K~~G-------------~~~~~V~aGT~v~-------------~G~~~i~Vta~g~~S~lgki~~lve~a~~ 209 (679)
T PRK01122 156 TGESAPVIRESG-------------GDFSSVTGGTRVL-------------SDWIVIRITANPGESFLDRMIALVEGAKR 209 (679)
T ss_pred cCCCCceEeCCC-------------CccCeEEeceEEE-------------eeeEEEEEEEecccCHHHHHHHHHHhccc
Confidence 999999999861 1123499999999 69999999999999999999998887777
Q ss_pred cCCcchhhHHHHHHHHHH---HHHHHHh-hhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhc
Q 003049 393 RVTANSWESGLFILFLVV---FAVIAAG-YVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARR 468 (853)
Q Consensus 393 ~~~~~~~~~~~fi~~ll~---~ai~~~~-~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~ 468 (853)
++++++.....+...+.+ ++++..+ +.|+.+ .. ..+..++.+++++|||+|+..++++...++.+|.|+
T Consensus 210 ~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g-----~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~ 282 (679)
T PRK01122 210 QKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSG-----GA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQA 282 (679)
T ss_pred cCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-----ch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcC
Confidence 677765443332222111 1111111 112211 12 245666777888999999999998888999999999
Q ss_pred ceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHH
Q 003049 469 GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEK 548 (853)
Q Consensus 469 ~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~ 548 (853)
|++++++..+|.+|++|++|||||||||+|+|.+..+++.++. .........+.|. ....||..+
T Consensus 283 gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------~~~~ll~~a~~~s-------~~s~hP~~~ 347 (679)
T PRK01122 283 NVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV--------TEEELADAAQLSS-------LADETPEGR 347 (679)
T ss_pred CeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------CHHHHHHHHHHhc-------CCCCCchHH
Confidence 9999999999999999999999999999999999998764331 0112222233332 123579999
Q ss_pred HHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHH
Q 003049 549 AALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIET 624 (853)
Q Consensus 549 a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~ 624 (853)
|+++++....+... ....+...+.+||++.+++|++.. ++ ..+.|||||.+++.|. .+|+++++.
T Consensus 348 AIv~~a~~~~~~~~-------~~~~~~~~~~~pF~s~~~~~gv~~--~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~ 416 (679)
T PRK01122 348 SIVVLAKQRFNLRE-------RDLQSLHATFVPFSAQTRMSGVDL--DG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416 (679)
T ss_pred HHHHHHHhhcCCCc-------hhhccccceeEeecCcCceEEEEE--CC--EEEEECCHHHHHHHHHhcCCcChHHHHHH
Confidence 99987642111100 001134556789999988888754 33 4789999999999994 357788888
Q ss_pred HHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH
Q 003049 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (853)
Q Consensus 625 ~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA 704 (853)
.++++++|.|++++|+ |++|+|++.++||+|||++++|++||++|++++|+||||+.||
T Consensus 417 ~~~~a~~G~~~l~va~---------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA 475 (679)
T PRK01122 417 VDEVARKGGTPLVVAE---------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 475 (679)
T ss_pred HHHHHhCCCcEEEEEE---------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 9999999999999996 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEE
Q 003049 705 CYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA 784 (853)
Q Consensus 705 ~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfA 784 (853)
.+||+++||. .+||
T Consensus 476 ~aIA~elGId------------------------------------------------------------------~v~A 489 (679)
T PRK01122 476 AAIAAEAGVD------------------------------------------------------------------DFLA 489 (679)
T ss_pred HHHHHHcCCc------------------------------------------------------------------EEEc
Confidence 9999999995 5899
Q ss_pred eeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 785 RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 785 r~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|++|+||.++|+.||+.|+.|+|+|||+||+||||+|||||||++|++. +++++|.++.+++|.++
T Consensus 490 ~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~I 555 (679)
T PRK01122 490 EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKL 555 (679)
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHH
Confidence 9999999999999999999999999999999999999999999999995 99999999999998764
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-83 Score=713.95 Aligned_cols=651 Identities=22% Similarity=0.268 Sum_probs=500.3
Q ss_pred cCCCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchhhHH----
Q 003049 148 LPYPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWY---- 220 (853)
Q Consensus 148 ~~~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~---- 220 (853)
.+.|.++..+.|.. ++||+.+ ++.+++.+-|+|.+.+|+. +-|..|.+++++-|-+....+..+.++ .|.+
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~-~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~-~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQ-EAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFV-AYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHH-HHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHH-HHhhhccc
Confidence 34566777777873 6899997 9999999999999998875 356778888877776554443333222 1211
Q ss_pred ---------H-HHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCC
Q 003049 221 ---------Y-SLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQ 287 (853)
Q Consensus 221 ---------~-s~~~l~~lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d 287 (853)
| ++++....++......+|..+. ++++++| .|+.++|+|||+...+.++|||+||+|.++.|+
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l--~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd-- 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNL--VPQQALVIRDGEKMTINAEELVVGDLVEVKGGD-- 193 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhcc--chhhheeeecceeEEechhhcccccceeeccCC--
Confidence 1 1111111122223334555443 5666665 467899999999999999999999999999987
Q ss_pred CCCCceeecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCc
Q 003049 288 TGEDKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGG 366 (853)
Q Consensus 288 ~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~ 366 (853)
+||||.+++++. +.||+|+|||||.|+...+.... +.. .+..|+-|.+|.++ +|.
T Consensus 194 -----rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~--~~~----~Et~Ni~f~st~~v-------------eG~ 249 (1019)
T KOG0203|consen 194 -----RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTH--ENP----LETRNIAFFSTNCV-------------EGT 249 (1019)
T ss_pred -----cccceeEEEEecceeEeccccccccCCccCCccccc--cCc----hhheeeeeeeeEEe-------------cce
Confidence 999999999995 89999999999999999774321 111 24588999999999 899
Q ss_pred EEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeec
Q 003049 367 CLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVI 446 (853)
Q Consensus 367 ~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~v 446 (853)
+.++|++||.+|..|++......-....++..++...|+.++..+|+...+.++..+..- ++.+...+...+.++++.+
T Consensus 250 ~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy~~l~avv~~i~iivAnv 328 (1019)
T KOG0203|consen 250 GRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GYEWLRAVVFLIGIIVANV 328 (1019)
T ss_pred EEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cchhHHHhhhhheeEEecC
Confidence 999999999999999998766555566778888888888888887777655554433322 4556677777899999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC---cc-------ccc
Q 003049 447 PPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---EL-------EDD 516 (853)
Q Consensus 447 P~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~---~~-------~~~ 516 (853)
|++||..++...+....+|++++.++++..+++++|...++|.|||||||+|.|+|..+|..+.- +. ..+
T Consensus 329 PeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~ 408 (1019)
T KOG0203|consen 329 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFD 408 (1019)
T ss_pred cCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999864321 00 001
Q ss_pred c-CCCCHHHHHHHHHhccceeeCC---------cccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCC
Q 003049 517 M-TKVPVRTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHL 586 (853)
Q Consensus 517 ~-~~~~~~~~~~la~chsl~~~~~---------~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~ 586 (853)
. +..-.....+...|+......| ...||+.|.|+++++...+.+-... ....+.+...||+|.+
T Consensus 409 ~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~------R~~~~kv~eipfNSt~ 482 (1019)
T KOG0203|consen 409 KSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMEL------RERNPKVAEIPFNSTN 482 (1019)
T ss_pred ccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHH------HHhhHHhhcCCccccc
Confidence 1 1112334566777888776654 3789999999999876544332111 1334556678999999
Q ss_pred CceEEEEEeCC----EEEEEEcCcHHHHHHhhccC-------C------hhHHHHHHHHHhccceEEEEEeeeCCCCChh
Q 003049 587 KRMSVVVRVQE----EFFAFVKGAPETIQDRLTDL-------P------SSYIETYKKYTHQGSRVLALAFKSLPDMTVS 649 (853)
Q Consensus 587 krmsvi~~~~~----~~~~~~KGapE~i~~~~~~i-------p------~~~~~~~~~~~~~G~rvlala~k~l~~~~~~ 649 (853)
|..-.+...++ ++.+.+|||||.++++|+++ | +.+.+.+.++...|-||++++++.++...+.
T Consensus 483 Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p 562 (1019)
T KOG0203|consen 483 KYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFP 562 (1019)
T ss_pred ceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCC
Confidence 99988887754 68889999999999999764 3 5678888999999999999999999854322
Q ss_pred hh---hhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCC
Q 003049 650 DA---RSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKN 726 (853)
Q Consensus 650 ~~---~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~ 726 (853)
+- ..-.-...-.+|.|+|++.+-||+|..+++++..||.|||+|+|+|||+|.||.++|+++||+..+..+.+..
T Consensus 563 ~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~-- 640 (1019)
T KOG0203|consen 563 RGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDI-- 640 (1019)
T ss_pred CceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhh--
Confidence 11 1111123346899999999999999999999999999999999999999999999999999986432221110
Q ss_pred CceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccc--eEEEeeChhhHHHHHHHHHHcCCE
Q 003049 727 GKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRM 804 (853)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~g~~ 804 (853)
.+....+.+ ..........+++|.++..++. +++.+++.+- .||||.||+||..||+..|++|.+
T Consensus 641 ---------a~r~~~~v~---~vn~~~a~a~VihG~eL~~~~~-~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~Gai 707 (1019)
T KOG0203|consen 641 ---------AKRLNIPVE---QVNSRDAKAAVIHGSELPDMSS-EQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAI 707 (1019)
T ss_pred ---------HHhcCCccc---ccCccccceEEEecccccccCH-HHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcE
Confidence 000000110 0111124678999999998876 5677777633 699999999999999999999999
Q ss_pred EEEEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 805 TLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 805 v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+.+|||+||+||||.|||||||| .|+|+ +++++|.++.||||.||
T Consensus 708 VaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASI 754 (1019)
T KOG0203|consen 708 VAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASI 754 (1019)
T ss_pred EEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhh
Confidence 999999999999999999999998 88886 99999999999999987
No 20
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=5.6e-77 Score=735.86 Aligned_cols=647 Identities=20% Similarity=0.245 Sum_probs=437.6
Q ss_pred HhcCCcccccCCccHHH----HHHHHhhchhHHHHHhhhhhhcch----hhHHHHHHHHHHHH----HHHHHHHHHHHHH
Q 003049 176 EKWGRNVFEYPQPTFQK----LMKENCMEPFFVFQVFCVGLWCLD----EYWYYSLFTLFMLF----MFESTMAKSRLKT 243 (853)
Q Consensus 176 ~~yG~N~~~~~~~~~~~----l~~~~~~~pf~vf~i~~~~lw~~~----~y~~~s~~~l~~lv----~~~~~~~~~~~k~ 243 (853)
.+|..|.+...+-+++. .+.+|+..+.+++-++..++-+.. ......++.+++++ +.+....++|.|+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~ 164 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRS 164 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35999999887766544 455666555444333322222211 11222222222222 2333344444444
Q ss_pred HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCCCccc
Q 003049 244 LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTP 318 (853)
Q Consensus 244 ~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~P 318 (853)
-++. .+..++|+|+|+++++++++|+|||+|.|++|| .+|||++|++ |.|.||||.|||||.|
T Consensus 165 d~~~-----N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge-------~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 165 DRIE-----NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQAND-------TLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHhh-----cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCC-------EeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 3332 346899999999999999999999999999988 9999999998 8899999999999999
Q ss_pred cccccccCCC----CCc----cccccC---------------------CCCeEEEeceEEeecCCCCCCCCCCCCCcEEE
Q 003049 319 QWKVSIMGRE----TGE----KLSARR---------------------DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (853)
Q Consensus 319 v~K~~~~~~~----~~~----~~~~~~---------------------~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~ 369 (853)
+.|.+.+... +.. .+..+. ..+|++..|+.+.. ..++.|
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lrn------------T~~i~G 300 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKN------------TAWAIG 300 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecC------------CceEEE
Confidence 9998753210 000 000001 11233334443331 458999
Q ss_pred EEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHH----HHHHHhh--hhhh-cccCC---------------
Q 003049 370 VVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVF----AVIAAGY--VLKK-GMEDP--------------- 427 (853)
Q Consensus 370 ~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~----ai~~~~~--~~~~-~~~~~--------------- 427 (853)
+|+.||.+|. ++..-..+..+.+..++....++.+++++ +++++++ +|.. +....
T Consensus 301 vVVYTG~dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 377 (1178)
T PLN03190 301 VAVYCGRETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGG 377 (1178)
T ss_pred EEEEechhhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence 9999999994 44433333345566665555554433322 2222211 2221 10000
Q ss_pred --Cc-------hhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcc----------eeccCCCCcccCccccEEE
Q 003049 428 --TR-------SKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRG----------IFCTEPFRIPFAGKVDMCC 488 (853)
Q Consensus 428 --~~-------~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~----------I~~~~~~~i~~lG~vd~ic 488 (853)
.. .....++.++.++..+||.+|++.+.++-......+.+.. ..|++....|.||+|+++|
T Consensus 378 ~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIf 457 (1178)
T PLN03190 378 PKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVF 457 (1178)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEE
Confidence 00 0122344556777789999999999988855444444322 5689999999999999999
Q ss_pred eCCCCcccCCCeEEEEEEecC----CCcc------------cc--------cc------------C-CCC-----HHHHH
Q 003049 489 FDKTGTLTSDDMEFRGVVGLS----NAEL------------ED--------DM------------T-KVP-----VRTQE 526 (853)
Q Consensus 489 fDKTGTLT~~~~~v~~i~~~~----~~~~------------~~--------~~------------~-~~~-----~~~~~ 526 (853)
+|||||||+|.|.++.+...+ +... .. .. . +.+ .+.++
T Consensus 458 SDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 537 (1178)
T PLN03190 458 SDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFL 537 (1178)
T ss_pred EcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHH
Confidence 999999999999999875321 0000 00 00 0 000 23567
Q ss_pred HHHHhccceee--CC---------cccC-CHHHHHHHhhcC---ceeccCc---ccccCCCCCcceEEEEEecCCCCCCc
Q 003049 527 ILASCHALVFV--DN---------KLVG-DPLEKAALKGID---WSYKSDE---KAMPKRGGGNAVQIVQRHHFASHLKR 588 (853)
Q Consensus 527 ~la~chsl~~~--~~---------~~~g-dple~a~l~~~~---~~~~~~~---~~~~~~~~~~~~~i~~~~~F~s~~kr 588 (853)
+++.||++... ++ +..| +|.|.|+++++. ..+...+ ......+....+++++.+||+|++||
T Consensus 538 ~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKr 617 (1178)
T PLN03190 538 ALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKR 617 (1178)
T ss_pred HHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccE
Confidence 89999998653 21 1334 899999999863 3222211 11122334567999999999999999
Q ss_pred eEEEEEe-CCEEEEEEcCcHHHHHHhhcc-----CChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhh---------
Q 003049 589 MSVVVRV-QEEFFAFVKGAPETIQDRLTD-----LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS--------- 653 (853)
Q Consensus 589 msvi~~~-~~~~~~~~KGapE~i~~~~~~-----ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~--------- 653 (853)
||||++. ++++++++|||||.|+++|.. .++.+.+.+++|+++|+|||++|||.+++.++.++..
T Consensus 618 MSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~ 697 (1178)
T PLN03190 618 MSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL 697 (1178)
T ss_pred EEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh
Confidence 9999987 456899999999999999953 3456788899999999999999999997643332210
Q ss_pred --------hcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCC
Q 003049 654 --------LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVK 725 (853)
Q Consensus 654 --------~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~ 725 (853)
.-++++|+||+|+|+++++||+|++++++|++|+++|++++|+|||++.||.+||++|||++++...+..+.
T Consensus 698 ~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~ 777 (1178)
T PLN03190 698 IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINS 777 (1178)
T ss_pred hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecC
Confidence 112568999999999999999999999999999999999999999999999999999999976532221111
Q ss_pred CCceeEeecCCccc----ccc-c----ch--hhhccccCceeEEEehhhhHHhhcc---hhHHhhcccce--EEEeeChh
Q 003049 726 NGKVYEWVSPDETE----KIQ-Y----SE--KEVEGLTDAHDLCIGGDCFEMLQQT---SAVLRVIPYVK--VFARVAPE 789 (853)
Q Consensus 726 ~~~~~~~~~~~~~~----~~~-~----~~--~~~~~~~~~~~l~itG~~l~~l~~~---~~~~~~~~~~~--VfAr~sP~ 789 (853)
+.....|...++.. ... . +. ........+..++++|.+++.+.+. +.+.++..++. ||||++|+
T Consensus 778 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~ 857 (1178)
T PLN03190 778 NSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPL 857 (1178)
T ss_pred CchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHH
Confidence 11000011000000 000 0 00 0001112456799999999998763 45777777665 79999999
Q ss_pred hHHHHHHHHHHc-CCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCc
Q 003049 790 QKELILTTFKAV-GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTK 850 (853)
Q Consensus 790 qK~~iV~~Lq~~-g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~ 850 (853)
||++||+.+|+. +++|+|||||+||++|||+|||||++ +|+|..+|..++|+++.+.+++
T Consensus 858 QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI-sG~EG~qA~~aSDfaI~~Fr~L 918 (1178)
T PLN03190 858 QKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMASDFAMGQFRFL 918 (1178)
T ss_pred HHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee-cCchhHHHHHhhccchhhhHHH
Confidence 999999999997 58999999999999999999999977 6888889999999999987765
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=5.7e-75 Score=677.16 Aligned_cols=467 Identities=19% Similarity=0.218 Sum_probs=364.6
Q ss_pred HHHHHHHHHHHHHHhhh-cCC-ceEEEEE-CCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeecc
Q 003049 235 TMAKSRLKTLTEIRRVR-VDN-QTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAI 311 (853)
Q Consensus 235 ~~~~~~~k~~~~l~~m~-~~~-~~v~V~R-~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~ 311 (853)
...+++.|+.++++++. ..| ..++|+| ||++++|++++|+|||+|.+++|| .|||||++++|.+.||||+
T Consensus 83 ~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd-------~IPaDG~vieG~~~VDESa 155 (675)
T TIGR01497 83 AEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGD-------VIPCDGEVIEGVASVDESA 155 (675)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCC-------EEeeeEEEEEccEEEEccc
Confidence 33445554444444432 233 3578885 899999999999999999999988 9999999999999999999
Q ss_pred CCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhcccc
Q 003049 312 LTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFST 391 (853)
Q Consensus 312 LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~ 391 (853)
|||||.||.|++-. ..+.+|+||.+. +|.+.++|+++|.+|..|++++.+..++
T Consensus 156 LTGES~PV~K~~g~-------------~~~~V~aGT~v~-------------~G~~~i~Vt~~g~~S~lgri~~lve~a~ 209 (675)
T TIGR01497 156 ITGESAPVIKESGG-------------DFASVTGGTRIL-------------SDWLVVECTANPGETFLDRMIALVEGAQ 209 (675)
T ss_pred ccCCCCceeecCCC-------------CcceeecCcEEE-------------eeEEEEEEEEecccCHHHHHHHHHHhcc
Confidence 99999999998611 112499999999 7999999999999999999999988777
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhccee
Q 003049 392 ERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIF 471 (853)
Q Consensus 392 ~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~ 471 (853)
.++++++.....+..++.++.+++.+.+|...... +.. ..+...+.+++++|||+|+..++.....++.++.|+|++
T Consensus 210 ~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~-~~~--~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvL 286 (675)
T TIGR01497 210 RRKTPNEIALTILLIALTLVFLLVTATLWPFAAYG-GNA--ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVI 286 (675)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Chh--HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeE
Confidence 76777664433333332222221111112111111 111 124445667788899988877776666789999999999
Q ss_pred ccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHH
Q 003049 472 CTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAAL 551 (853)
Q Consensus 472 ~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l 551 (853)
++++..+|.+|++|++|||||||||+|+|.+..+++.++. ...+.....+.|. ....||+++|++
T Consensus 287 vK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------~~~~ll~~aa~~~-------~~s~hP~a~Aiv 351 (675)
T TIGR01497 287 ATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV--------DEKTLADAAQLAS-------LADDTPEGKSIV 351 (675)
T ss_pred eeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC--------cHHHHHHHHHHhc-------CCCCCcHHHHHH
Confidence 9999999999999999999999999999999998864321 1122233333332 124689999999
Q ss_pred hhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHHHHH
Q 003049 552 KGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKK 627 (853)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~~~~ 627 (853)
+++... +.+.. .......+..||++..++|++... ++ ..+.|||||.+++.|. ..|+++++.+++
T Consensus 352 ~~a~~~-~~~~~-------~~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~ 420 (675)
T TIGR01497 352 ILAKQL-GIRED-------DVQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQ 420 (675)
T ss_pred HHHHHc-CCCcc-------ccccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 876421 11000 011234567899999766665433 33 4688999999998883 357888889999
Q ss_pred HHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHH
Q 003049 628 YTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYV 707 (853)
Q Consensus 628 ~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~V 707 (853)
++++|.|++++|+ |.+++|++.++||+|||++++|++||++|++++|+||||+.||.++
T Consensus 421 ~a~~G~r~l~va~---------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~i 479 (675)
T TIGR01497 421 VARQGGTPLVVCE---------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAI 479 (675)
T ss_pred HHhCCCeEEEEEE---------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 9999999999997 3589999999999999999999999999999999999999999999
Q ss_pred HHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeC
Q 003049 708 ASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA 787 (853)
Q Consensus 708 A~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~s 787 (853)
|+++||. .+|||++
T Consensus 480 A~~lGI~------------------------------------------------------------------~v~a~~~ 493 (675)
T TIGR01497 480 AAEAGVD------------------------------------------------------------------DFIAEAT 493 (675)
T ss_pred HHHcCCC------------------------------------------------------------------EEEcCCC
Confidence 9999996 5899999
Q ss_pred hhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 788 PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 788 P~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+||..+|+.+|+.|+.|+|+|||+||+|||++|||||||++|++. ++++++..+.+++|.++
T Consensus 494 PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~I 556 (675)
T TIGR01497 494 PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKL 556 (675)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHH
Confidence 9999999999999999999999999999999999999999998885 88888999999998764
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-72 Score=651.74 Aligned_cols=466 Identities=25% Similarity=0.310 Sum_probs=385.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcCCceEEEEE-CCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecc
Q 003049 220 YYSLFTLFMLFMFESTMAKSRLKTLTEIRR-VRVDNQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPAD 297 (853)
Q Consensus 220 ~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~-m~~~~~~v~V~R-~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD 297 (853)
..+..+++++.+.+....+.+.|+.+.++. +...|.++++++ ||++++|+.++|.|||+|.|++|| +||+|
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE-------~IPvD 247 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGE-------RIPVD 247 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCC-------EecCC
Confidence 334455555556666677777788888877 467888998877 566999999999999999999998 99999
Q ss_pred eeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcc
Q 003049 298 MLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377 (853)
Q Consensus 298 ~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~ 377 (853)
|++++|+..||||+|||||+|+.|.+ ++.+|+||.+. +|.....|+++|.+
T Consensus 248 G~V~~G~s~vDeS~iTGEs~PV~k~~----------------Gd~V~aGtiN~-------------~G~l~i~vt~~~~d 298 (713)
T COG2217 248 GVVVSGSSSVDESMLTGESLPVEKKP----------------GDEVFAGTVNL-------------DGSLTIRVTRVGAD 298 (713)
T ss_pred eEEEeCcEEeecchhhCCCCCEecCC----------------CCEEeeeEEEC-------------CccEEEEEEecCcc
Confidence 99999999999999999999999986 77899999998 89999999999999
Q ss_pred cchhHHHHHhccccccCCcc----hhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHH
Q 003049 378 TSQGKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPME 453 (853)
Q Consensus 378 T~~g~l~r~i~~~~~~~~~~----~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~ 453 (853)
|..+++++.+..++.++.+. ++.+.+|++..++++++.++.|++.+ +.++...+.+++.+++++|||+|.++
T Consensus 299 t~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~----~~~~~~a~~~a~avLVIaCPCALgLA 374 (713)
T COG2217 299 TTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG----GGDWETALYRALAVLVIACPCALGLA 374 (713)
T ss_pred CHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHhheeeeCccHHHhH
Confidence 99999999998887766654 45566788877777777666443333 13456678899999999999999999
Q ss_pred HHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcc
Q 003049 454 LSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHA 533 (853)
Q Consensus 454 lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chs 533 (853)
.++++..++.+.+|+||++|++..+|.++++|+++||||||||+|+|.|..+...++ +.+..+.+++ +
T Consensus 375 tP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~----------~e~~~L~laA--a 442 (713)
T COG2217 375 TPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG----------DEDELLALAA--A 442 (713)
T ss_pred HHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC----------CHHHHHHHHH--H
Confidence 999999999999999999999999999999999999999999999999999986542 1222223333 3
Q ss_pred ceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHh
Q 003049 534 LVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDR 613 (853)
Q Consensus 534 l~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~ 613 (853)
+. ..+.||+.+|+.+++...- . ...+..+.+ ...++....+|+ .+..|+++.+.+.
T Consensus 443 lE----~~S~HPiA~AIv~~a~~~~-~-----------~~~~~~~~i------~G~Gv~~~v~g~--~v~vG~~~~~~~~ 498 (713)
T COG2217 443 LE----QHSEHPLAKAIVKAAAERG-L-----------PDVEDFEEI------PGRGVEAEVDGE--RVLVGNARLLGEE 498 (713)
T ss_pred HH----hcCCChHHHHHHHHHHhcC-C-----------CCccceeee------ccCcEEEEECCE--EEEEcCHHHHhhc
Confidence 32 4678999999999654220 0 011111222 244555555663 3345999999877
Q ss_pred hccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcE
Q 003049 614 LTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDL 693 (853)
Q Consensus 614 ~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v 693 (853)
-...+. ..+..+.+.++|..++.++. |.+++|++.++|++|||++++|++||+.|+++
T Consensus 499 ~~~~~~-~~~~~~~~~~~G~t~v~va~---------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~ 556 (713)
T COG2217 499 GIDLPL-LSERIEALESEGKTVVFVAV---------------------DGKLVGVIALADELRPDAKEAIAALKALGIKV 556 (713)
T ss_pred CCCccc-hhhhHHHHHhcCCeEEEEEE---------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeE
Confidence 666655 77778899999999888876 55899999999999999999999999999999
Q ss_pred EEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhH
Q 003049 694 AMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAV 773 (853)
Q Consensus 694 ~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~ 773 (853)
+|+||||..||.+||+++||.
T Consensus 557 ~mLTGDn~~~A~~iA~~lGId----------------------------------------------------------- 577 (713)
T COG2217 557 VMLTGDNRRTAEAIAKELGID----------------------------------------------------------- 577 (713)
T ss_pred EEEcCCCHHHHHHHHHHcChH-----------------------------------------------------------
Confidence 999999999999999999996
Q ss_pred HhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 774 ~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
.|+|.+.|+||.++|+.||+.|++|+|+|||+||+|||++||||||||+|+|. +.+.+|..+.+++..+
T Consensus 578 -------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~ 646 (713)
T COG2217 578 -------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSA 646 (713)
T ss_pred -------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHH
Confidence 58999999999999999999999999999999999999999999999999996 7778888888877654
No 23
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-73 Score=618.47 Aligned_cols=586 Identities=24% Similarity=0.302 Sum_probs=434.2
Q ss_pred cCCCCcccccccc-ccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchh-HHHHHhhhhhhcch------hhH
Q 003049 148 LPYPTKETFGYYL-KCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF-FVFQVFCVGLWCLD------EYW 219 (853)
Q Consensus 148 ~~~~~~~~~~~~~-~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf-~vf~i~~~~lw~~~------~y~ 219 (853)
...|.++.++++. +..||++. |+++|+++||+|+++.++.+-+..|...+.+|. ++++..++....+. .-|
T Consensus 19 ~~~p~eeVfeeL~~t~~GLt~~-E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW 97 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTREGLTSD-EVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDW 97 (942)
T ss_pred ccCchhhhHHHHhcCCCCCchH-HHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcch
Confidence 3456777888887 45699997 999999999999999877766666667778887 45555444333332 134
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeec
Q 003049 220 YYSLFTLFMLFMFESTMAKSRL---KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPA 296 (853)
Q Consensus 220 ~~s~~~l~~lv~~~~~~~~~~~---k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPa 296 (853)
.....+..++++.....+.++. ....+|++ ....+..|+|||+|.++++++||||||++++.|+ +|||
T Consensus 98 ~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a--~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~Gd-------IiPa 168 (942)
T KOG0205|consen 98 QDFVGICCLLLINSTISFIEENNAGNAAAALMA--GLAPKAKVLRDGKWSEQEASILVPGDILSIKLGD-------IIPA 168 (942)
T ss_pred hhhhhhheeeeecceeeeeeccccchHHHHHHh--ccCcccEEeecCeeeeeeccccccCceeeeccCC-------EecC
Confidence 4433333333333333333333 33445543 1123688999999999999999999999999987 9999
Q ss_pred ceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeC
Q 003049 297 DMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375 (853)
Q Consensus 297 D~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG 375 (853)
|++|++|+ ..||+|.|||||.|+.|.+ ++.+|+|++|.| |.+.++|++||
T Consensus 169 DaRLl~gD~LkiDQSAlTGESLpvtKh~----------------gd~vfSgSTcKq-------------GE~eaVViATg 219 (942)
T KOG0205|consen 169 DARLLEGDPLKIDQSALTGESLPVTKHP----------------GDEVFSGSTCKQ-------------GEIEAVVIATG 219 (942)
T ss_pred ccceecCCccccchhhhcCCccccccCC----------------CCceeccccccc-------------ceEEEEEEEec
Confidence 99999997 7799999999999999976 678999999984 89999999999
Q ss_pred cccchhHHHHHhccccccCCcchhhH---HHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeE-eecCCCch
Q 003049 376 FETSQGKLMRTILFSTERVTANSWES---GLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIIT-SVIPPELP 451 (853)
Q Consensus 376 ~~T~~g~l~r~i~~~~~~~~~~~~~~---~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~-~~vP~~Lp 451 (853)
..|..|+-...+-. ...+.-+++.. ..|.+.++.+.+++ .|..... . .+-.+.....-++++. .-+|.++|
T Consensus 220 ~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~li-e~~vmy~--~-q~R~~r~~i~nLlvllIGgiPiamP 294 (942)
T KOG0205|consen 220 VHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLI-EITVMYP--I-QHRLYRDGIDNLLVLLIGGIPIAMP 294 (942)
T ss_pred cceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHH-HHHhhhh--h-hhhhhhhhhhheheeeecccccccc
Confidence 99999998876643 33332222221 12222222222211 1111111 1 1122333334444444 44999999
Q ss_pred HHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEE--EEecCCCccccccCCCCHHHHHHHH
Q 003049 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRG--VVGLSNAELEDDMTKVPVRTQEILA 529 (853)
Q Consensus 452 ~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~la 529 (853)
..++..++.+..+|+++|.+.+...+||.++.+|++|+|||||||.|++.|.+ +... .+..+.+...++|
T Consensus 295 tVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~--------v~gv~~D~~~L~A 366 (942)
T KOG0205|consen 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--------VKGVDKDDVLLTA 366 (942)
T ss_pred eeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee--------ecCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 3111 1223344444444
Q ss_pred HhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHH
Q 003049 530 SCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPE 608 (853)
Q Consensus 530 ~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE 608 (853)
|.+. ..+| .|.+|+|++..++.. +.....++.++-+||++..||.+..+.. +|+.+..+|||||
T Consensus 367 -~rAs-r~en---~DAID~A~v~~L~dP----------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPe 431 (942)
T KOG0205|consen 367 -ARAS-RKEN---QDAIDAAIVGMLADP----------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPE 431 (942)
T ss_pred -HHHh-hhcC---hhhHHHHHHHhhcCH----------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChH
Confidence 4333 2222 589999999987632 1123568899999999999998887776 6678889999999
Q ss_pred HHHHhh---ccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHH
Q 003049 609 TIQDRL---TDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSE 685 (853)
Q Consensus 609 ~i~~~~---~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~ 685 (853)
.|++.| ..+|+...+.+++|+++|+|-+++|++..++... +.-.....|+|++-+-||+|.|+.++|++
T Consensus 432 qil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--------~~~g~pw~~~gllp~fdpprhdsa~tirr 503 (942)
T KOG0205|consen 432 QILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--------ESPGGPWEFVGLLPLFDPPRHDSAETIRR 503 (942)
T ss_pred HHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccc--------cCCCCCcccccccccCCCCccchHHHHHH
Confidence 999999 4689999999999999999999999998774321 12234578999999999999999999999
Q ss_pred HhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--C-eEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehh
Q 003049 686 LKNSSQDLAMITGDQALTACYVASQVHIVTK--P-VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGD 762 (853)
Q Consensus 686 L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~-~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~ 762 (853)
....|.+|.|+|||....|...+|++|+-.+ + ...+....++ .+.|
T Consensus 504 al~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~------------------------------~~~~- 552 (942)
T KOG0205|consen 504 ALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG------------------------------SMPG- 552 (942)
T ss_pred HHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC------------------------------CCCC-
Confidence 9999999999999999999999999999643 0 1011110000 0011
Q ss_pred hhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccc
Q 003049 763 CFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSE 842 (853)
Q Consensus 763 ~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~ 842 (853)
....+++.+..=||.+.|+||..+|+.||++||.++|+|||+||+||||.||+|||+.++++. +..++|+
T Consensus 553 --------~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda--ar~asdi 622 (942)
T KOG0205|consen 553 --------SPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARSASDI 622 (942)
T ss_pred --------CcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh--hcccccE
Confidence 123445556678999999999999999999999999999999999999999999999999995 7778887
Q ss_pred cccccCC
Q 003049 843 ASKDENT 849 (853)
Q Consensus 843 ~~~~~~~ 849 (853)
++.+...
T Consensus 623 Vltepgl 629 (942)
T KOG0205|consen 623 VLTEPGL 629 (942)
T ss_pred EEcCCCc
Confidence 7766443
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=3.2e-68 Score=619.26 Aligned_cols=423 Identities=36% Similarity=0.565 Sum_probs=356.8
Q ss_pred HHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccc
Q 003049 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQW 320 (853)
Q Consensus 241 ~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~ 320 (853)
.+.++.++++...|..++|+|+| |++|++++|+|||+|.+++|+ .|||||+|++|.+.||||+|||||.|+.
T Consensus 21 ~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~-------~iP~Dg~vl~g~~~vdes~LTGEs~pv~ 92 (499)
T TIGR01494 21 EDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGE-------IVPADGVLLSGSCFVDESNLTGESVPVL 92 (499)
T ss_pred HHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCC-------EeeeeEEEEEccEEEEcccccCCCCCee
Confidence 34444554433677899999999 999999999999999999988 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcc---
Q 003049 321 KVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTAN--- 397 (853)
Q Consensus 321 K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~--- 397 (853)
|.+ ++.+|+||.+. +|.....|+++|.+|..+++.+.+....+..++.
T Consensus 93 k~~----------------g~~v~~gs~~~-------------~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~ 143 (499)
T TIGR01494 93 KTA----------------GDAVFAGTYVF-------------NGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPK 143 (499)
T ss_pred ecc----------------CCccccCcEEe-------------ccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHH
Confidence 986 55689999998 6889999999999999999998876555433332
Q ss_pred -hhhH-HHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCC
Q 003049 398 -SWES-GLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEP 475 (853)
Q Consensus 398 -~~~~-~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~ 475 (853)
++.. .+|+.++++++++++++++..+.. ..++...+..++.++++++||+||++++++...+..++.|+||+++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~~~--~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~ 221 (499)
T TIGR01494 144 LDRLSDIIFILFVLLIALAVFLFWAIGLWD--PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSL 221 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEech
Confidence 2333 456666666666655554433211 113567789999999999999999999999999999999999999999
Q ss_pred CCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcC
Q 003049 476 FRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555 (853)
Q Consensus 476 ~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~ 555 (853)
..+|.+|++|++|||||||||+|+|+|.+++..+. ...++||+|+|+++++.
T Consensus 222 ~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------------------~~~s~hp~~~ai~~~~~ 273 (499)
T TIGR01494 222 NALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG----------------------------EYLSGHPDERALVKSAK 273 (499)
T ss_pred hhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------CcCCCChHHHHHHHHhh
Confidence 99999999999999999999999999999875321 13468999999999876
Q ss_pred ceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccceE
Q 003049 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRV 635 (853)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rv 635 (853)
+. .++.+||++..++|+++++.+++ .++||+||.+.+.|.. +.+..+.++++|+|+
T Consensus 274 ~~------------------~~~~~~f~~~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~----~~~~~~~~~~~g~~~ 329 (499)
T TIGR01494 274 WK------------------ILNVFEFSSVRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD----LEEKVKELAQSGLRV 329 (499)
T ss_pred hc------------------CcceeccCCCCceEEEEEecCCc--EEEeCCHHHHHHhhHH----HHHHHHHHHhCCCEE
Confidence 42 12457999999999999986443 3689999999998853 445556788999999
Q ss_pred EEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 636 LALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 636 lala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
+++|++. +++|++.++|++|++++++|+.|+++|++++|+|||++.||.++|+++||
T Consensus 330 ~~~a~~~---------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-- 386 (499)
T TIGR01494 330 LAVASKE---------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-- 386 (499)
T ss_pred EEEEECC---------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--
Confidence 9999843 69999999999999999999999999999999999999999999999975
Q ss_pred CCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHH
Q 003049 716 KPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELIL 795 (853)
Q Consensus 716 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV 795 (853)
+||++|+||.++|
T Consensus 387 -------------------------------------------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 387 -------------------------------------------------------------------FARVTPEEKAALV 399 (499)
T ss_pred -------------------------------------------------------------------eeccCHHHHHHHH
Confidence 5789999999999
Q ss_pred HHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 796 TTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 796 ~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
+.+|+.|+.|+|+|||+||+|||++|||||||+ +...+|..+.++++.+
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-------a~~~adivl~~~~l~~ 448 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-------AKAAADIVLLDDNLST 448 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-------hHHhCCeEEecCCHHH
Confidence 999999999999999999999999999999996 3555777777766543
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.1e-66 Score=626.44 Aligned_cols=459 Identities=21% Similarity=0.245 Sum_probs=369.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceee
Q 003049 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (853)
Q Consensus 222 s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~il 300 (853)
+.++++++.+.+....+++.|+.+.++++ ...|.+++|+|||++++|++++|+|||+|.|++|+ +|||||+|
T Consensus 209 a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~-------~IP~Dg~v 281 (741)
T PRK11033 209 AAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGG-------RLPADGKL 281 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCC-------EEecceEE
Confidence 34444444455556666677776666663 45678999999999999999999999999999988 99999999
Q ss_pred ecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccch
Q 003049 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (853)
Q Consensus 301 l~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~ 380 (853)
++|++.||||+|||||.|+.|.+ ++.+|+||.++ +|.+.+.|+++|.+|..
T Consensus 282 i~g~~~vdes~lTGEs~Pv~k~~----------------Gd~V~aGt~~~-------------~G~~~i~V~~~g~~s~l 332 (741)
T PRK11033 282 LSPFASFDESALTGESIPVERAT----------------GEKVPAGATSV-------------DRLVTLEVLSEPGASAI 332 (741)
T ss_pred EECcEEeecccccCCCCCEecCC----------------CCeeccCCEEc-------------CceEEEEEEeccccCHH
Confidence 99999999999999999999975 67899999998 79999999999999999
Q ss_pred hHHHHHhccccccCCcch----hhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHH
Q 003049 381 GKLMRTILFSTERVTANS----WESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (853)
Q Consensus 381 g~l~r~i~~~~~~~~~~~----~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lsl 456 (853)
|++++.+....+++++.+ +.+.+|+.++++++++.+++++... +.++...+..++.++++.|||+|.++.++
T Consensus 333 ~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~----~~~~~~~i~~a~svlviacPcaL~latP~ 408 (741)
T PRK11033 333 DRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF----AAPWQEWIYRGLTLLLIGCPCALVISTPA 408 (741)
T ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCCHHHHHHHHHHHHHHhchhhhhhhhHH
Confidence 999999988776666544 4455666666666666655443221 22345567788888899999999999999
Q ss_pred HHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcccee
Q 003049 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (853)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (853)
++..++.+++|+||+++++..+|.++++|++|||||||||+|+|+|..+...++ ...+..+.+++ ++.
T Consensus 409 a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------~~~~~~l~~aa--~~e- 476 (741)
T PRK11033 409 AITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG---------ISESELLALAA--AVE- 476 (741)
T ss_pred HHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC---------CCHHHHHHHHH--HHh-
Confidence 999999999999999999999999999999999999999999999999876432 12222222222 221
Q ss_pred eCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceE---EEEEeCCEEEEEEcCcHHHHHHh
Q 003049 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMS---VVVRVQEEFFAFVKGAPETIQDR 613 (853)
Q Consensus 537 ~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krms---vi~~~~~~~~~~~KGapE~i~~~ 613 (853)
..+.||+++|+++++... + + .+||.++.+.+. +....+++.+ ..|+|+.+.+
T Consensus 477 ---~~s~hPia~Ai~~~a~~~---~------------~----~~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~- 531 (741)
T PRK11033 477 ---QGSTHPLAQAIVREAQVR---G------------L----AIPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP- 531 (741)
T ss_pred ---cCCCCHHHHHHHHHHHhc---C------------C----CCCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh-
Confidence 346899999999876321 0 0 135555555542 3334455543 3489998865
Q ss_pred hccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcE
Q 003049 614 LTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDL 693 (853)
Q Consensus 614 ~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v 693 (853)
+++.+.+.++.+..+|+|++++|+ |.+|+|++.|+|++|||++++|++|++.|+++
T Consensus 532 ---~~~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~ 587 (741)
T PRK11033 532 ---LADAFAGQINELESAGKTVVLVLR---------------------NDDVLGLIALQDTLRADARQAISELKALGIKG 587 (741)
T ss_pred ---ccHHHHHHHHHHHhCCCEEEEEEE---------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEE
Confidence 345666777889999999999997 56899999999999999999999999999999
Q ss_pred EEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhH
Q 003049 694 AMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAV 773 (853)
Q Consensus 694 ~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~ 773 (853)
+|+|||+..+|.++|+++||.
T Consensus 588 ~llTGd~~~~a~~ia~~lgi~----------------------------------------------------------- 608 (741)
T PRK11033 588 VMLTGDNPRAAAAIAGELGID----------------------------------------------------------- 608 (741)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-----------------------------------------------------------
Confidence 999999999999999999994
Q ss_pred HhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 774 ~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
+++++.|+||..+|+.||+. +.|+|+|||+||+|||++|||||||++|++. +.+.+|..+.++++..
T Consensus 609 --------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~adivl~~~~l~~ 675 (741)
T PRK11033 609 --------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALETADAALTHNRLRG 675 (741)
T ss_pred --------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHH
Confidence 46778999999999999965 5899999999999999999999999999886 4455677777766643
No 26
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-66 Score=591.04 Aligned_cols=462 Identities=22% Similarity=0.261 Sum_probs=378.5
Q ss_pred HHHHHHHHHHHh-hhcCCceEEEEECCE-EEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCC
Q 003049 238 KSRLKTLTEIRR-VRVDNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE 315 (853)
Q Consensus 238 ~~~~k~~~~l~~-m~~~~~~v~V~R~g~-~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGE 315 (853)
..+.|+-..+.+ |+..|.++.++.+|+ .++|+.+.|.+||+|.|.+|+ +||+||++++|++.||||++|||
T Consensus 360 ~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~-------kiPvDG~Vv~Gss~VDEs~iTGE 432 (951)
T KOG0207|consen 360 LAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGE-------KIPVDGVVVDGSSEVDESLITGE 432 (951)
T ss_pred HhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCC-------ccccccEEEeCceeechhhccCC
Confidence 344555555555 577888999999997 899999999999999999998 99999999999999999999999
Q ss_pred ccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCC
Q 003049 316 STPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVT 395 (853)
Q Consensus 316 S~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~ 395 (853)
|+||.|++ ++.+.+||.+. +|.....++++|.+|..++++|.+..++..+.
T Consensus 433 s~PV~Kk~----------------gs~ViaGsiN~-------------nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKa 483 (951)
T KOG0207|consen 433 SMPVPKKK----------------GSTVIAGSINL-------------NGTLLVKATKVGGDTTLAQIVKLVEEAQLSKA 483 (951)
T ss_pred ceecccCC----------------CCeeeeeeecC-------------CceEEEEEEeccccchHHHHHHHHHHHHcccc
Confidence 99999986 78999999998 79999999999999999999999988776665
Q ss_pred cc----hhhHHHHHHHHHHHHHHHHhhhhhhcccCCC------chhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHH
Q 003049 396 AN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPT------RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIAL 465 (853)
Q Consensus 396 ~~----~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~------~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l 465 (853)
+. ++.+.+|..++++++++.+.+|.+.+..... ......|..++.+++++|||+|.++.+.|+..+..-.
T Consensus 484 piQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg 563 (951)
T KOG0207|consen 484 PIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG 563 (951)
T ss_pred hHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh
Confidence 54 4556778888888887776666555542211 2233456778999999999999999999998888888
Q ss_pred HhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCH
Q 003049 466 ARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDP 545 (853)
Q Consensus 466 ~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdp 545 (853)
+++|+++|..+.+|.+.+|++++||||||||+|++.|..+....+. .+....+.+++... ..+.||
T Consensus 564 A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~--------~~~~e~l~~v~a~E------s~SeHP 629 (951)
T KOG0207|consen 564 ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP--------ISLKEALALVAAME------SGSEHP 629 (951)
T ss_pred hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc--------ccHHHHHHHHHHHh------cCCcCc
Confidence 9999999999999999999999999999999999999999876542 23333333322211 356899
Q ss_pred HHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCChhHHHHH
Q 003049 546 LEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETY 625 (853)
Q Consensus 546 le~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~ 625 (853)
+.+|+.+++......... ..++..-.|..+-.. +=+..+++. ..-|+-|.+...-...|++.++..
T Consensus 630 ig~AIv~yak~~~~~~~~----------~~~~~~~~~pg~g~~--~~~~~~~~~--i~iGN~~~~~r~~~~~~~~i~~~~ 695 (951)
T KOG0207|consen 630 IGKAIVDYAKEKLVEPNP----------EGVLSFEYFPGEGIY--VTVTVDGNE--VLIGNKEWMSRNGCSIPDDILDAL 695 (951)
T ss_pred hHHHHHHHHHhcccccCc----------cccceeecccCCCcc--cceEEeeeE--EeechHHHHHhcCCCCchhHHHhh
Confidence 999999998644311110 011111112111111 222222322 456999999998888999999999
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
++..++|..+..+++ |-+++|++.++|++|||+..+|+.||+.|++++|+||||..||.
T Consensus 696 ~~~e~~g~tvv~v~v---------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~ 754 (951)
T KOG0207|consen 696 TESERKGQTVVYVAV---------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAAR 754 (951)
T ss_pred hhHhhcCceEEEEEE---------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHH
Confidence 999999999999988 66899999999999999999999999999999999999999999
Q ss_pred HHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEe
Q 003049 706 YVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR 785 (853)
Q Consensus 706 ~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr 785 (853)
++|+++||. .|||.
T Consensus 755 svA~~VGi~------------------------------------------------------------------~V~ae 768 (951)
T KOG0207|consen 755 SVAQQVGID------------------------------------------------------------------NVYAE 768 (951)
T ss_pred HHHHhhCcc------------------------------------------------------------------eEEec
Confidence 999999964 69999
Q ss_pred eChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 786 VAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 786 ~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+.|+||.++|+.||+.|..|+|||||+||+|||.+|||||||+.|++. |..++|.++..++..+|
T Consensus 769 v~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v 833 (951)
T KOG0207|consen 769 VLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDV 833 (951)
T ss_pred cCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhh
Confidence 999999999999999999999999999999999999999999999885 77788888888776654
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.6e-64 Score=593.90 Aligned_cols=477 Identities=22% Similarity=0.266 Sum_probs=374.8
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECC-EEEEeecCCcCCCeEEEEcCCCCCCC
Q 003049 212 LWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCG-KWVKLAGTDLVPGDVVSIGRSSGQTG 289 (853)
Q Consensus 212 lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g-~~~~I~s~~LvpGDiV~l~~g~~d~~ 289 (853)
++++...|..+..+++++++......++++|+.+.++++. ..|..++|+|+| ++++|++++|+|||+|.+++|+
T Consensus 11 ~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~---- 86 (556)
T TIGR01525 11 AAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGE---- 86 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCC----
Confidence 3333344556666677777777777888888888888763 456789999996 9999999999999999999988
Q ss_pred CCceeecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEE
Q 003049 290 EDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (853)
Q Consensus 290 ~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~ 369 (853)
.|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+
T Consensus 87 ---~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~-------------~g~~~~ 134 (556)
T TIGR01525 87 ---RIPVDGVVISGESEVDESALTGESMPVEKKE----------------GDEVFAGTING-------------DGSLTI 134 (556)
T ss_pred ---EeccceEEEecceEEeehhccCCCCCEecCC----------------cCEEeeceEEC-------------CceEEE
Confidence 9999999999999999999999999999975 67899999998 799999
Q ss_pred EEEeeCcccchhHHHHHhccccccCCcchh----hHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEee
Q 003049 370 VVLRTGFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSV 445 (853)
Q Consensus 370 ~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~----~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~ 445 (853)
+|++||.+|..|++.+.+..+.+++++.++ .+.+|+.+.++++++++++++..+. . ..+..++.+++..
T Consensus 135 ~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-----~--~~~~~~~~vlv~~ 207 (556)
T TIGR01525 135 RVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-----L--GALYRALAVLVVA 207 (556)
T ss_pred EEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c--hHHHHHHHHHhhc
Confidence 999999999999999998876665555443 3445666666666666555544321 1 5677888899999
Q ss_pred cCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHH
Q 003049 446 IPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQ 525 (853)
Q Consensus 446 vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 525 (853)
+||+||+++++++..++.+|+|+||+++++..+|.+|++|++|||||||||+|+|+|.++...++.. ...+
T Consensus 208 ~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~~~-- 278 (556)
T TIGR01525 208 CPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------ISEE-- 278 (556)
T ss_pred cccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------ccHH--
Confidence 9999999999999999999999999999999999999999999999999999999999988643310 0012
Q ss_pred HHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcC
Q 003049 526 EILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKG 605 (853)
Q Consensus 526 ~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KG 605 (853)
.++..|.++. ....||+++|+++++... +.+.. . . .++ +.++ ..++....++. .-+..|
T Consensus 279 ~~l~~a~~~e----~~~~hp~~~Ai~~~~~~~-~~~~~---~-~--~~~---~~~~------~~gi~~~~~g~-~~~~lg 337 (556)
T TIGR01525 279 ELLALAAALE----QSSSHPLARAIVRYAKKR-GLELP---K-Q--EDV---EEVP------GKGVEATVDGQ-EEVRIG 337 (556)
T ss_pred HHHHHHHHHh----ccCCChHHHHHHHHHHhc-CCCcc---c-c--cCe---eEec------CCeEEEEECCe-eEEEEe
Confidence 2333343332 246799999999887421 00000 0 0 001 1111 11233333442 234459
Q ss_pred cHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHH
Q 003049 606 APETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSE 685 (853)
Q Consensus 606 apE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~ 685 (853)
+++.+...-...+ .+.+..+.++++|+|++.++. |.+++|.+.++|++||+++++|++
T Consensus 338 ~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~---------------------~~~~~g~i~~~d~~~~g~~e~l~~ 395 (556)
T TIGR01525 338 NPRLLELAAEPIS-ASPDLLNEGESQGKTVVFVAV---------------------DGELLGVIALRDQLRPEAKEAIAA 395 (556)
T ss_pred cHHHHhhcCCCch-hhHHHHHHHhhCCcEEEEEEE---------------------CCEEEEEEEecccchHhHHHHHHH
Confidence 9987721112222 334566778899999999986 558999999999999999999999
Q ss_pred HhhCC-CcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhh
Q 003049 686 LKNSS-QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCF 764 (853)
Q Consensus 686 L~~ag-i~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l 764 (853)
|++.| +++.|+|||+..+|.++++++||.
T Consensus 396 L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-------------------------------------------------- 425 (556)
T TIGR01525 396 LKRAGGIKLVMLTGDNRSAAEAVAAELGID-------------------------------------------------- 425 (556)
T ss_pred HHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--------------------------------------------------
Confidence 99999 999999999999999999999995
Q ss_pred HHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccc
Q 003049 765 EMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844 (853)
Q Consensus 765 ~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~ 844 (853)
.+|+++.|++|..+++.+++.|+.|+|+|||.||++|+++|||||+++++++. ++..+|...
T Consensus 426 ----------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~--~~~~Ad~vi 487 (556)
T TIGR01525 426 ----------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDV--AIEAADIVL 487 (556)
T ss_pred ----------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH--HHHhCCEEE
Confidence 58999999999999999999999999999999999999999999999976664 556778887
Q ss_pred cccCCcc
Q 003049 845 KDENTKS 851 (853)
Q Consensus 845 ~~~~~~~ 851 (853)
.++++.+
T Consensus 488 ~~~~~~~ 494 (556)
T TIGR01525 488 LNDDLSS 494 (556)
T ss_pred eCCCHHH
Confidence 7777654
No 28
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3e-64 Score=587.97 Aligned_cols=458 Identities=23% Similarity=0.272 Sum_probs=361.4
Q ss_pred hhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCC
Q 003049 209 CVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQ 287 (853)
Q Consensus 209 ~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d 287 (853)
+++.|.+.+ |+.+.++++++.+......++++|+.+.++++. ..|.+++|+|||++++|++++|+|||+|.+++|+
T Consensus 9 ~~~~~~~~~-~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~-- 85 (536)
T TIGR01512 9 ALGAVAIGE-YLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGE-- 85 (536)
T ss_pred HHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCC--
Confidence 344444444 455666666666667777788888888887754 4678999999999999999999999999999988
Q ss_pred CCCCceeecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcE
Q 003049 288 TGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGC 367 (853)
Q Consensus 288 ~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~ 367 (853)
.|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+
T Consensus 86 -----~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~-------------~G~~ 131 (536)
T TIGR01512 86 -----RVPVDGVVLSGTSTVDESALTGESVPVEKAP----------------GDEVFAGAINL-------------DGVL 131 (536)
T ss_pred -----EeecceEEEeCcEEEEecccCCCCCcEEeCC----------------CCEEEeeeEEC-------------CceE
Confidence 9999999999999999999999999999975 67899999998 7999
Q ss_pred EEEEEeeCcccchhHHHHHhccccccCCcchhh----HHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeE
Q 003049 368 LAVVLRTGFETSQGKLMRTILFSTERVTANSWE----SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIIT 443 (853)
Q Consensus 368 ~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~----~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~ 443 (853)
.++|++||.+|..|++.+.+..+....++.++. +.+|+.+++.++++.+++++..+ .. ...+..++.+++
T Consensus 132 ~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~svlv 205 (536)
T TIGR01512 132 TIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK----RW--PFWVYRALVLLV 205 (536)
T ss_pred EEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cc--HHHHHHHHHHHh
Confidence 999999999999999999888766655554443 44555555555555444443322 11 125777888899
Q ss_pred eecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHH
Q 003049 444 SVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVR 523 (853)
Q Consensus 444 ~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~ 523 (853)
.+|||+||+++++++..++.+++|+||+++++.++|.+|++|++|||||||||+|+|++.++.+. +
T Consensus 206 ~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--------------~ 271 (536)
T TIGR01512 206 VASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--------------E 271 (536)
T ss_pred hcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH--------------H
Confidence 99999999999999999999999999999999999999999999999999999999999988631 2
Q ss_pred HHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEE
Q 003049 524 TQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFV 603 (853)
Q Consensus 524 ~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~ 603 (853)
++..+.++. ....||+++|+++++... + .+.-.+.+| ...+....+++.+ .
T Consensus 272 ---~l~~a~~~e----~~~~hp~~~Ai~~~~~~~---~-----------~~~~~~~~~------g~gi~~~~~g~~~--~ 322 (536)
T TIGR01512 272 ---VLRLAAAAE----QASSHPLARAIVDYARKR---E-----------NVESVEEVP------GEGVRAVVDGGEV--R 322 (536)
T ss_pred ---HHHHHHHHh----ccCCCcHHHHHHHHHHhc---C-----------CCcceEEec------CCeEEEEECCeEE--E
Confidence 222222222 345799999999876421 0 001111112 1223333345433 3
Q ss_pred cCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHH
Q 003049 604 KGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKIL 683 (853)
Q Consensus 604 KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I 683 (853)
.|+++.+.+... ..+..+|.+++.++. |..++|.+.++|++||+++++|
T Consensus 323 ig~~~~~~~~~~----------~~~~~~~~~~~~v~~---------------------~~~~~g~i~~~d~l~~~~~e~i 371 (536)
T TIGR01512 323 IGNPRSLEAAVG----------ARPESAGKTIVHVAR---------------------DGTYLGYILLSDEPRPDAAEAI 371 (536)
T ss_pred EcCHHHHhhcCC----------cchhhCCCeEEEEEE---------------------CCEEEEEEEEeccchHHHHHHH
Confidence 599877654321 145677888876653 6789999999999999999999
Q ss_pred HHHhhCCC-cEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehh
Q 003049 684 SELKNSSQ-DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGD 762 (853)
Q Consensus 684 ~~L~~agi-~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~ 762 (853)
++|+++|+ ++.|+|||+..+|..+++++||.
T Consensus 372 ~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------------------------------ 403 (536)
T TIGR01512 372 AELKALGIEKVVMLTGDRRAVAERVARELGID------------------------------------------------ 403 (536)
T ss_pred HHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------------------------------
Confidence 99999999 99999999999999999999995
Q ss_pred hhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec-cCCCcCccccccc
Q 003049 763 CFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSS 841 (853)
Q Consensus 763 ~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~ 841 (853)
.+|+++.|++|..+++.+++.++.|+|+|||.||++|+++||+||+++ ++++. +...+|
T Consensus 404 ------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~--~~~~ad 463 (536)
T TIGR01512 404 ------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV--AIETAD 463 (536)
T ss_pred ------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH--HHHhCC
Confidence 468899999999999999999999999999999999999999999999 66664 555667
Q ss_pred ccccccCCcc
Q 003049 842 EASKDENTKS 851 (853)
Q Consensus 842 ~~~~~~~~~~ 851 (853)
....++++..
T Consensus 464 ~vl~~~~l~~ 473 (536)
T TIGR01512 464 VVLLNDDLSR 473 (536)
T ss_pred EEEECCCHHH
Confidence 7776665543
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.1e-62 Score=576.63 Aligned_cols=454 Identities=21% Similarity=0.266 Sum_probs=353.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEEC-CEEEEeecCCcCCCeEEEEcCCCCCCCCCceee
Q 003049 218 YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295 (853)
Q Consensus 218 y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vP 295 (853)
||..+..+++++.+.+....+.+.|+.+.++++ ...|.+++++|+ |++++|++++|+|||+|.|++|+ .||
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge-------~iP 125 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGE-------KIP 125 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCC-------Eec
Confidence 333333334444444555566666666666654 446778999985 77899999999999999999988 999
Q ss_pred cceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeC
Q 003049 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375 (853)
Q Consensus 296 aD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG 375 (853)
|||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+.|++||
T Consensus 126 ~Dg~v~~g~~~vdes~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~g~~~~~v~~~g 176 (562)
T TIGR01511 126 VDGTVIEGESEVDESLVTGESLPVPKKV----------------GDPVIAGTVNG-------------TGSLVVRATATG 176 (562)
T ss_pred CceEEEECceEEehHhhcCCCCcEEcCC----------------CCEEEeeeEEC-------------CceEEEEEEEec
Confidence 9999999999999999999999999976 67899999998 799999999999
Q ss_pred cccchhHHHHHhccccccCCcchh----hHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCch
Q 003049 376 FETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELP 451 (853)
Q Consensus 376 ~~T~~g~l~r~i~~~~~~~~~~~~----~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp 451 (853)
.+|..|++++.+..+..++++.++ .+.+|+..+++++++++.+|+ ..+..++.++++.|||+|+
T Consensus 177 ~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------~~~~~~~svlvvacPcaL~ 244 (562)
T TIGR01511 177 EDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------FALEFAVTVLIIACPCALG 244 (562)
T ss_pred CCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHhccchhh
Confidence 999999999999877666655544 344555555555554433321 2467788889999999999
Q ss_pred HHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHh
Q 003049 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASC 531 (853)
Q Consensus 452 ~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~c 531 (853)
+++++++..++.+++|+||+++++..+|.++++|++|||||||||+|+|++.++...++. ..+ .++..|
T Consensus 245 la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~---------~~~--~~l~~a 313 (562)
T TIGR01511 245 LATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR---------DRT--ELLALA 313 (562)
T ss_pred hHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC---------CHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999999999998764321 112 223333
Q ss_pred ccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHH
Q 003049 532 HALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (853)
Q Consensus 532 hsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~ 611 (853)
+++. ..+.||+++|+++++... +... ....-.+.+ ...++....+++. +..|+++.+.
T Consensus 314 a~~e----~~s~HPia~Ai~~~~~~~---~~~~-------~~~~~~~~~------~g~Gi~~~~~g~~--~~iG~~~~~~ 371 (562)
T TIGR01511 314 AALE----AGSEHPLAKAIVSYAKEK---GITL-------VEVSDFKAI------PGIGVEGTVEGTK--IQLGNEKLLG 371 (562)
T ss_pred HHHh----ccCCChHHHHHHHHHHhc---CCCc-------CCCCCeEEE------CCceEEEEECCEE--EEEECHHHHH
Confidence 3333 245799999999876421 0000 000001111 1223444445543 4569999886
Q ss_pred HhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC
Q 003049 612 DRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ 691 (853)
Q Consensus 612 ~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi 691 (853)
+....++ .+.++|.+++.++. |.+++|++.++|++||+++++|++|++.|+
T Consensus 372 ~~~~~~~--------~~~~~g~~~~~~~~---------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi 422 (562)
T TIGR01511 372 ENAIKID--------GKAEQGSTSVLVAV---------------------NGELAGVFALEDQLRPEAKEVIQALKRRGI 422 (562)
T ss_pred hCCCCCC--------hhhhCCCEEEEEEE---------------------CCEEEEEEEecccccHHHHHHHHHHHHcCC
Confidence 5443333 23578999888764 678999999999999999999999999999
Q ss_pred cEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcch
Q 003049 692 DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTS 771 (853)
Q Consensus 692 ~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~ 771 (853)
+++|+|||+..+|..+|+++||.
T Consensus 423 ~v~ilSgd~~~~a~~ia~~lgi~--------------------------------------------------------- 445 (562)
T TIGR01511 423 EPVMLTGDNRKTAKAVAKELGIN--------------------------------------------------------- 445 (562)
T ss_pred eEEEEcCCCHHHHHHHHHHcCCc---------------------------------------------------------
Confidence 99999999999999999999983
Q ss_pred hHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCc
Q 003049 772 AVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTK 850 (853)
Q Consensus 772 ~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~ 850 (853)
+|+++.|++|..+++.+++.|+.|+|+|||.||++|+++|||||+++.+++. +...+|....++++.
T Consensus 446 ----------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Advvl~~~~l~ 512 (562)
T TIGR01511 446 ----------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADVVLMRNDLN 512 (562)
T ss_pred ----------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCEEEeCCCHH
Confidence 5788899999999999999999999999999999999999999999987764 555677777665543
No 30
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-63 Score=542.41 Aligned_cols=631 Identities=22% Similarity=0.277 Sum_probs=445.3
Q ss_pred HHHHhcCCcccccCCc---cH-HHHHHHHhhchh---HHHHHhhhhh-----hcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 003049 173 VATEKWGRNVFEYPQP---TF-QKLMKENCMEPF---FVFQVFCVGL-----WCLDEYWYYSLFTLFMLFMFESTMAKSR 240 (853)
Q Consensus 173 ~~~~~yG~N~~~~~~~---~~-~~l~~~~~~~pf---~vf~i~~~~l-----w~~~~y~~~s~~~l~~lv~~~~~~~~~~ 240 (853)
.++++|-+|++...+. +| ...+.+++...+ |++..++.+. -.+..||..-.|.+.+.++-|+....+|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3567799999887654 33 234444443322 2222222111 1234566655666666666666655555
Q ss_pred HHHHHHHHhhhcCCceEEEE-ECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCC
Q 003049 241 LKTLTEIRRVRVDNQTIMVH-RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTG 314 (853)
Q Consensus 241 ~k~~~~l~~m~~~~~~v~V~-R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTG 314 (853)
++.-++.. ....+++ |+|...+ +++++.+||+|.+..++ +||||++||+ |+|.+-.-.|.|
T Consensus 154 ~~rd~~~N-----se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~-------RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 154 RRRDRELN-----SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDE-------RVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHhhhhhh-----hhhheeeccCCcccc-cccccccccEEEEecCC-------cCCcceEEEEccCCCCceEEeccccCC
Confidence 44333322 1233344 6776554 99999999999999988 9999999995 789999999999
Q ss_pred CccccccccccCCC----CCccccc--------------------------cC-CCCeEEEeceEEeecCCCCCCCCCCC
Q 003049 315 ESTPQWKVSIMGRE----TGEKLSA--------------------------RR-DKSHVLFGGTKILQHTPDKTFPLKTP 363 (853)
Q Consensus 315 ES~Pv~K~~~~~~~----~~~~~~~--------------------------~~-~~~~~lf~GT~v~q~~~~~~~~~~~~ 363 (853)
|..-..|-|+|... +++.... +. .-.|+|+++|.+.
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvA------------- 287 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVA------------- 287 (1051)
T ss_pred cccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEe-------------
Confidence 99988887775210 0010000 01 2257888888887
Q ss_pred CCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHh-hhhhhcccCCCchhhHHHHHhheee
Q 003049 364 DGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAG-YVLKKGMEDPTRSKYKLFLSCSLII 442 (853)
Q Consensus 364 ~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~-~~~~~~~~~~~~~~~~~~l~~~~ii 442 (853)
+|+++|+|+.||.+|.+- +. -..++.++...+.+...+..+|.++.++.+. .+...|. +..|+..+++.+.++
T Consensus 288 s~t~~gvVvYTG~dtRsv--MN-ts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~---~~~wyi~~~RfllLF 361 (1051)
T KOG0210|consen 288 SGTAIGVVVYTGRDTRSV--MN-TSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF---GSDWYIYIIRFLLLF 361 (1051)
T ss_pred cCcEEEEEEEecccHHHH--hc-cCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC---CCchHHHHHHHHHHH
Confidence 688999999999999421 11 1122234444566666666666666555443 3445554 346888899999999
Q ss_pred EeecCCCchHHHHHHHHHHHHHHHh----cceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecC----CC---
Q 003049 443 TSVIPPELPMELSIAVNTSLIALAR----RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLS----NA--- 511 (853)
Q Consensus 443 ~~~vP~~Lp~~lslav~~s~~~l~k----~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~----~~--- 511 (853)
.+++|..|-+.+.+|-..-.....+ -|..+++...-|.+|+|..+.+|||||||+|+|.+++++... .+
T Consensus 362 S~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~ 441 (1051)
T KOG0210|consen 362 SSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMD 441 (1051)
T ss_pred hhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHH
Confidence 9999999999988886655444433 256778877778999999999999999999999999987421 10
Q ss_pred -------ccc---------------cccCCCCHHHHHHHHHhccceeeC---Cc---ccCCHHHHHHHhhc---Cceecc
Q 003049 512 -------ELE---------------DDMTKVPVRTQEILASCHALVFVD---NK---LVGDPLEKAALKGI---DWSYKS 560 (853)
Q Consensus 512 -------~~~---------------~~~~~~~~~~~~~la~chsl~~~~---~~---~~gdple~a~l~~~---~~~~~~ 560 (853)
... .+.+..-.+..+.+|.||.+...- |+ ....|.|.|+++++ |..+..
T Consensus 442 eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~ 521 (1051)
T KOG0210|consen 442 EVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAK 521 (1051)
T ss_pred HHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEee
Confidence 000 011111235678899999987542 22 45689999998765 333332
Q ss_pred Ccc----cccCCCCCcceEEEEEecCCCCCCceEEEEEeC--CEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccce
Q 003049 561 DEK----AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSR 634 (853)
Q Consensus 561 ~~~----~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~--~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~r 634 (853)
.+. .....+....++|++.|||.|+.|||++|++.+ ++...+.|||.-.|..+. +..++.++....||++|+|
T Consensus 522 Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~NdWleEE~gNMAREGLR 600 (1051)
T KOG0210|consen 522 RDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QYNDWLEEECGNMAREGLR 600 (1051)
T ss_pred cccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-ccchhhhhhhhhhhhhcce
Confidence 221 111223346899999999999999999999995 789999999988887664 3467888999999999999
Q ss_pred EEEEEeeeCCCCChhhhhh---------hcH---------HhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEE
Q 003049 635 VLALAFKSLPDMTVSDARS---------LHR---------DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696 (853)
Q Consensus 635 vlala~k~l~~~~~~~~~~---------~~r---------~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~mi 696 (853)
++.+|.|.+++.+++.++. .+| ..+|.||.++|+.+.||+|++|++.+++-||+|||++||+
T Consensus 601 tLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWML 680 (1051)
T KOG0210|consen 601 TLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWML 680 (1051)
T ss_pred EEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEE
Confidence 9999999998765443322 122 2689999999999999999999999999999999999999
Q ss_pred cCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcc--hhHH
Q 003049 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--SAVL 774 (853)
Q Consensus 697 TGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~--~~~~ 774 (853)
|||..+||+.||+..+++.++..+.... ++...... ........-..+..++|.|+.++...+. .++.
T Consensus 681 TGDKlETA~ciAkSs~L~sR~q~ihv~~---------~v~sr~da-h~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~ 750 (1051)
T KOG0210|consen 681 TGDKLETAICIAKSSRLFSRGQYIHVIR---------SVTSRGDA-HNELNNLRRKTDCALVIDGESLEFCLKYYEDEFI 750 (1051)
T ss_pred cCcchhheeeeehhccceecCceEEEEE---------ecCCchHH-HHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHH
Confidence 9999999999999999998765543221 11000000 0001112234567899999999887753 4566
Q ss_pred hhcc--cceEEEeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 775 RVIP--YVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 775 ~~~~--~~~VfAr~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
++.. ...|+||++|.||+++++.||+ .|..|+.+|||.||++|+++|||||.+ .|.|..+|.-++|..+.+.
T Consensus 751 el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI-~gkEGkQASLAADfSItqF 825 (1051)
T KOG0210|consen 751 ELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGI-VGKEGKQASLAADFSITQF 825 (1051)
T ss_pred HHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceee-ecccccccchhccccHHHH
Confidence 6554 4579999999999999999998 689999999999999999999999999 5666667777777766553
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.8e-62 Score=599.43 Aligned_cols=466 Identities=23% Similarity=0.283 Sum_probs=366.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceee
Q 003049 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (853)
Q Consensus 222 s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~il 300 (853)
+..+++++.+......+.+.|+.+.++++ ...|.+++|+|+|++++|+.++|+|||+|.|++|+ +|||||+|
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~-------~iP~Dg~v 361 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGD-------RVPVDGEI 361 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCC-------EeeeeEEE
Confidence 34444444455555556666666666663 45678999999999999999999999999999998 99999999
Q ss_pred ecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccch
Q 003049 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (853)
Q Consensus 301 l~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~ 380 (853)
++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+.|+++|.+|..
T Consensus 362 ~~g~~~vdeS~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~G~~~~~v~~~g~~t~l 412 (834)
T PRK10671 362 TQGEAWLDEAMLTGEPIPQQKGE----------------GDSVHAGTVVQ-------------DGSVLFRASAVGSHTTL 412 (834)
T ss_pred EEceEEEeehhhcCCCCCEecCC----------------CCEEEecceec-------------ceeEEEEEEEEcCcChH
Confidence 99999999999999999999986 67899999998 79999999999999999
Q ss_pred hHHHHHhccccccCCcc----hhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHH
Q 003049 381 GKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (853)
Q Consensus 381 g~l~r~i~~~~~~~~~~----~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lsl 456 (853)
|++++.+..+...+.+. ++.+.+|+.++++++++.+++|+..+. ...+...+..++.+++++|||+|++++++
T Consensus 413 ~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~---~~~~~~~~~~a~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 413 SRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP---APQIVYTLVIATTVLIIACPCALGLATPM 489 (834)
T ss_pred HHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---chHHHHHHHHHHHHHHHhcccchhhhHHH
Confidence 99999987765544443 344566777777777766555544331 11233456678888889999999999999
Q ss_pred HHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcccee
Q 003049 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (853)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (853)
++..++.+++|+||+++++..+|.+|++|++|||||||||+|+|+|..+...++ ......+.++ .++.
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------~~~~~~l~~a--~~~e- 557 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG---------VDEAQALRLA--AALE- 557 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC---------CCHHHHHHHH--HHHh-
Confidence 999999999999999999999999999999999999999999999998875432 1122222222 2221
Q ss_pred eCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhcc
Q 003049 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTD 616 (853)
Q Consensus 537 ~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ 616 (853)
..+.||+++|+++++... . . + .. .+|... ...++-...+++. +.+|+++.+.+....
T Consensus 558 ---~~s~hp~a~Ai~~~~~~~---~--~-~------~~-----~~~~~~-~g~Gv~~~~~g~~--~~~G~~~~~~~~~~~ 614 (834)
T PRK10671 558 ---QGSSHPLARAILDKAGDM---T--L-P------QV-----NGFRTL-RGLGVSGEAEGHA--LLLGNQALLNEQQVD 614 (834)
T ss_pred ---CCCCCHHHHHHHHHHhhC---C--C-C------Cc-----ccceEe-cceEEEEEECCEE--EEEeCHHHHHHcCCC
Confidence 345799999999875310 0 0 0 00 011111 1123333345543 356999988654332
Q ss_pred CChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEE
Q 003049 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696 (853)
Q Consensus 617 ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~mi 696 (853)
. +...+.++.+.++|.+++.+++ |..++|++.+.|++||+++++|++|++.|++++|+
T Consensus 615 ~-~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~ 672 (834)
T PRK10671 615 T-KALEAEITAQASQGATPVLLAV---------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVML 672 (834)
T ss_pred h-HHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEE
Confidence 2 3456667788999999999987 34689999999999999999999999999999999
Q ss_pred cCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhh
Q 003049 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRV 776 (853)
Q Consensus 697 TGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~ 776 (853)
|||+..+|..+|+++||.
T Consensus 673 Tgd~~~~a~~ia~~lgi~-------------------------------------------------------------- 690 (834)
T PRK10671 673 TGDNPTTANAIAKEAGID-------------------------------------------------------------- 690 (834)
T ss_pred cCCCHHHHHHHHHHcCCC--------------------------------------------------------------
Confidence 999999999999999995
Q ss_pred cccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 777 ~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
.+|+++.|++|.++++.++..|+.|+|+|||.||++||++|||||||++|++. +...+|.+..++++..
T Consensus 691 ----~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~ad~vl~~~~~~~ 759 (834)
T PRK10671 691 ----EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETAAITLMRHSLMG 759 (834)
T ss_pred ----EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHH
Confidence 58999999999999999999999999999999999999999999999999886 5556666666665543
No 32
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.6e-59 Score=559.32 Aligned_cols=663 Identities=22% Similarity=0.283 Sum_probs=429.9
Q ss_pred HHHhcCCcccccCCccHH----HHHHHHhhchhHHHHHhhhhhhcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003049 174 ATEKWGRNVFEYPQPTFQ----KLMKENCMEPFFVFQVFCVGLWCL---DEYWYYSLFTLFMLFMFESTMAKSRLKTLTE 246 (853)
Q Consensus 174 ~~~~yG~N~~~~~~~~~~----~l~~~~~~~pf~vf~i~~~~lw~~---~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~ 246 (853)
+...|-.|.+...+.+++ .-+.+|+..+-.+|-++..+|-+. .-.++.++..++ ++...+.+++.....++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~--~vl~~t~iKd~~eD~rR 105 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLL--FVLGITAIKDAIEDYRR 105 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeecee--eeehHHHHHHHHhhhhh
Confidence 455899999987665433 345555555433332322222222 122333332222 22223333332222222
Q ss_pred HHh-hhcCCceEEEEECCE-EEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCCCcccc
Q 003049 247 IRR-VRVDNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQ 319 (853)
Q Consensus 247 l~~-m~~~~~~v~V~R~g~-~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~Pv 319 (853)
-+. ...+..++.|.|++. +++..+++|++||+|.+..++ .+|||.+|++ |.|.|+.++|.||....
T Consensus 106 ~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~-------~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 106 HKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDE-------FVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred hhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCC-------ccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 221 123346788998543 899999999999999999977 9999999996 66999999999999999
Q ss_pred ccccccCCCCC---c-cc------cccC-CCCeEEEeceEEeecCC-CCC--------CCCCCCCCcEEEEEEeeCcccc
Q 003049 320 WKVSIMGRETG---E-KL------SARR-DKSHVLFGGTKILQHTP-DKT--------FPLKTPDGGCLAVVLRTGFETS 379 (853)
Q Consensus 320 ~K~~~~~~~~~---~-~~------~~~~-~~~~~lf~GT~v~q~~~-~~~--------~~~~~~~g~~~~~V~~tG~~T~ 379 (853)
.|.+++..... + .. ..+. +..-.-|-|+.-.+... +.. +.+++ ...+.++|+-||.+|.
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrN-T~~v~G~vv~tG~dtK 257 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRN-TEWVYGVVVFTGHDTK 257 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceecc-CcEEEEEEEEcCCcch
Confidence 99876532110 0 00 0000 11111223333222111 000 11111 4689999999999995
Q ss_pred hhHHHHHhccccccCCcchhhHHHHHHHH----HHHHHHHH--hhhhhhc--c-------cCCC---chhhHHHHHhhee
Q 003049 380 QGKLMRTILFSTERVTANSWESGLFILFL----VVFAVIAA--GYVLKKG--M-------EDPT---RSKYKLFLSCSLI 441 (853)
Q Consensus 380 ~g~l~r~i~~~~~~~~~~~~~~~~fi~~l----l~~ai~~~--~~~~~~~--~-------~~~~---~~~~~~~l~~~~i 441 (853)
.++ .-..+..+.+...+....++..+ +.++++.+ ..+|... . ..+. ...+..++..+.+
T Consensus 258 ~~~---n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 258 LMQ---NSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred HHH---hcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 443 33333334444333332222211 11111111 1112110 0 0001 1223446677788
Q ss_pred eEeecCCCchHHHHHHHHHHHH------HHH----hcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC
Q 003049 442 ITSVIPPELPMELSIAVNTSLI------ALA----RRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA 511 (853)
Q Consensus 442 i~~~vP~~Lp~~lslav~~s~~------~l~----k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~ 511 (853)
+..++|..|.+.+.+.-..... .|. .....|++.+--|.+|+|+++..|||||||+|.|++......+..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999876654433322 121 345678888888999999999999999999999999876543211
Q ss_pred -----c---------c--------c-----cc------------cCCCCHHHHHHHHHhccceeeC-C------cccCCH
Q 003049 512 -----E---------L--------E-----DD------------MTKVPVRTQEILASCHALVFVD-N------KLVGDP 545 (853)
Q Consensus 512 -----~---------~--------~-----~~------------~~~~~~~~~~~la~chsl~~~~-~------~~~gdp 545 (853)
. . . .+ ..........++|.||++.... . .....|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 0 0 0 00 0011134678899999987654 1 235689
Q ss_pred HHHHHHhhcC---ceeccC--cc-cccCCCCCcceEEEEEecCCCCCCceEEEEEeCC-EEEEEEcCcHHHHHHhhccC-
Q 003049 546 LEKAALKGID---WSYKSD--EK-AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRLTDL- 617 (853)
Q Consensus 546 le~a~l~~~~---~~~~~~--~~-~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~-~~~~~~KGapE~i~~~~~~i- 617 (853)
.|.|+++++. ..+-.. +. .....+....++++...+|+|.|||||||++.++ +..++||||+.+|.+++..-
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~ 574 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNG 574 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcc
Confidence 9999998763 222111 11 1122233568999999999999999999999954 89999999999999999632
Q ss_pred ---ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhh---------cH--------HhhhcCcceeeEeeecCCCCc
Q 003049 618 ---PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL---------HR--------DEVENGLTFAGFAVFNCPIRE 677 (853)
Q Consensus 618 ---p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~---------~r--------~~~E~dl~f~G~l~~~d~lr~ 677 (853)
-+.-.+.+++|+.+|+|+|++|||++++.+++++... +| +.+|+||+++|..++||+|++
T Consensus 575 ~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQd 654 (1151)
T KOG0206|consen 575 EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQD 654 (1151)
T ss_pred hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhcc
Confidence 2334457889999999999999999998776555332 33 469999999999999999999
Q ss_pred chHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCccc------ccccch----hh
Q 003049 678 DSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETE------KIQYSE----KE 747 (853)
Q Consensus 678 ~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~------~~~~~~----~~ 747 (853)
+++++|+.|++|||++||+|||..+||++||..|+++++++..+..+..... .-...+... ....+. ..
T Consensus 655 gVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 733 (1151)
T KOG0206|consen 655 GVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE-ELSSLDATAALKETLLRKFTEELEEAK 733 (1151)
T ss_pred CchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh-hhcchhhHHHHHHHHHHhhhHHHHHHh
Confidence 9999999999999999999999999999999999999775543322221110 000111100 000000 00
Q ss_pred hccccCceeEEEehhhhHHhhcchhH---Hhhcc--cceEEEeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhC
Q 003049 748 VEGLTDAHDLCIGGDCFEMLQQTSAV---LRVIP--YVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~---~~~~~--~~~VfAr~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~A 821 (853)
.....+...++++|+.+.+..+.+.. ..+.. +..++||+||.||+.+|+..++ .+.+|+.+|||+||++|++.|
T Consensus 734 ~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~A 813 (1151)
T KOG0206|consen 734 LEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEA 813 (1151)
T ss_pred hccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeC
Confidence 01111368999999999998875332 33332 5679999999999999999984 789999999999999999999
Q ss_pred CceEEeccCCCcCcccccccccccccCCcc
Q 003049 822 HVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 822 dVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
||||.+ +|.|..+|..++|.++.+.+|+.
T Consensus 814 hVGVGI-sG~EGmQAvmsSD~AIaqFrfL~ 842 (1151)
T KOG0206|consen 814 HVGVGI-SGQEGMQAVMSSDFAIAQFRFLE 842 (1151)
T ss_pred CcCeee-ccchhhhhhhcccchHHHHHHHh
Confidence 999999 57777799999999998887753
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-55 Score=469.57 Aligned_cols=439 Identities=23% Similarity=0.273 Sum_probs=329.8
Q ss_pred HHHHHhhhcCCceEEEEEC-CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccccc
Q 003049 244 LTEIRRVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKV 322 (853)
Q Consensus 244 ~~~l~~m~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~ 322 (853)
-++||+.+.. ..++++++ |.++.+++.+|..||+|.|..|| +||+||.+++|.+.||||.+||||.||.|+
T Consensus 94 AdsLr~~~~~-~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age-------~IP~DGeVIeG~asVdESAITGESaPVire 165 (681)
T COG2216 94 ADSLRKTKTE-TIARLLRADGSIEMVPATELKKGDIVLVEAGE-------IIPSDGEVIEGVASVDESAITGESAPVIRE 165 (681)
T ss_pred HHHHHHHHHH-HHHHHhcCCCCeeeccccccccCCEEEEecCC-------CccCCCeEEeeeeecchhhccCCCcceeec
Confidence 3455543322 34556665 89999999999999999999988 999999999999999999999999999998
Q ss_pred cccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHH
Q 003049 323 SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESG 402 (853)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~ 402 (853)
+- +|. +-+-+||.++ +.+.+..++....+|...+++..+..++.++++|.....
T Consensus 166 sG------------gD~-ssVtGgT~v~-------------SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~ 219 (681)
T COG2216 166 SG------------GDF-SSVTGGTRVL-------------SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT 219 (681)
T ss_pred cC------------CCc-ccccCCcEEe-------------eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH
Confidence 61 122 3488999999 689999999999999999999999888888888876544
Q ss_pred HHHHHH-HHHHHH-HHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCccc
Q 003049 403 LFILFL-VVFAVI-AAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480 (853)
Q Consensus 403 ~fi~~l-l~~ai~-~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~ 480 (853)
.+...| ++|.++ +..|.+..... +..... ...+.++++.+|-...--+|.-=..++.|+.+.+++.+++.++|.
T Consensus 220 iLL~~LTliFL~~~~Tl~p~a~y~~--g~~~~i--~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEa 295 (681)
T COG2216 220 ILLSGLTLIFLLAVATLYPFAIYSG--GGAASV--TVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295 (681)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHcC--CCCcCH--HHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhh
Confidence 443322 222222 22332222111 111112 222334445678776666664444568899999999999999999
Q ss_pred CccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCce-ec
Q 003049 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWS-YK 559 (853)
Q Consensus 481 lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~-~~ 559 (853)
+|.||++..|||||+|-|+-.-..+.+.++. ..+.+.-.|.-.|+. |.. |--+.+++.+... ..
T Consensus 296 aGDvdtliLDKTGTIT~GnR~A~~f~p~~gv---------~~~~la~aa~lsSl~--DeT----pEGrSIV~LA~~~~~~ 360 (681)
T COG2216 296 AGDVDTLLLDKTGTITLGNRQASEFIPVPGV---------SEEELADAAQLASLA--DET----PEGRSIVELAKKLGIE 360 (681)
T ss_pred cCCccEEEecccCceeecchhhhheecCCCC---------CHHHHHHHHHHhhhc--cCC----CCcccHHHHHHHhccC
Confidence 9999999999999999998887777766542 222222222222322 222 2223333332211 00
Q ss_pred cCcccccCCCCCcceE-EEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHHHHHHHhccce
Q 003049 560 SDEKAMPKRGGGNAVQ-IVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQGSR 634 (853)
Q Consensus 560 ~~~~~~~~~~~~~~~~-i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~~~~~~~~G~r 634 (853)
.+. .... -..-.||+.+. |||-+-..++ .-+-|||+..++.... ++|++.+..+++-++.|-.
T Consensus 361 ~~~---------~~~~~~~~fvpFtA~T-RmSGvd~~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGT 428 (681)
T COG2216 361 LRE---------DDLQSHAEFVPFTAQT-RMSGVDLPGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGT 428 (681)
T ss_pred CCc---------ccccccceeeecceec-ccccccCCCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence 000 0000 12456897664 5655443333 4567999999998874 4899999999999999999
Q ss_pred EEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 635 VLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 635 vlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.|+++. |-.++|.+.++|-+||+.+|-+.+||+.||+++|+||||+.||..||+|.|+.
T Consensus 429 PL~V~~---------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 429 PLVVVE---------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred ceEEEE---------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 999875 56899999999999999999999999999999999999999999999999996
Q ss_pred CCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHH
Q 003049 715 TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELI 794 (853)
Q Consensus 715 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~i 794 (853)
...|+++||+|.++
T Consensus 488 ------------------------------------------------------------------dfiAeatPEdK~~~ 501 (681)
T COG2216 488 ------------------------------------------------------------------DFIAEATPEDKLAL 501 (681)
T ss_pred ------------------------------------------------------------------hhhhcCChHHHHHH
Confidence 36789999999999
Q ss_pred HHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 795 LTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 795 V~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
|+.-|..|+.|+|||||+||+|||.|||||+||.+|+..+
T Consensus 502 I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAA 541 (681)
T COG2216 502 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA 541 (681)
T ss_pred HHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHH
Confidence 9999999999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.98 E-value=9.3e-32 Score=282.25 Aligned_cols=222 Identities=25% Similarity=0.442 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-cCCce-EEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-c
Q 003049 227 FMLFMFESTMAKSRLKTLTEIRRVR-VDNQT-IMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-G 303 (853)
Q Consensus 227 ~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~-v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-G 303 (853)
+++++......+++.|+.+.++++. ..+.+ +.|+|||+|++++++||+|||+|.+++|+ .+||||+|++ |
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~-------~vPaD~~ll~~g 76 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGD-------IVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTE-------BESSEEEEEESS
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeeccccc-------ccccCccceecc
Confidence 3334444445555556656665542 23334 99999999999999999999999999988 9999999999 9
Q ss_pred eeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHH
Q 003049 304 SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (853)
Q Consensus 304 ~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l 383 (853)
.+.||||.||||+.|+.|.+. ..+.++.+|+||.+. +|.+.++|++||.+|..|++
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~-----------~~~~~~~i~~Gs~v~-------------~g~~~~~Vi~tG~~t~~~~~ 132 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL-----------PLNPGNIIFAGSIVV-------------SGWGIGVVIATGSDTKLGRI 132 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS-----------CCCTTTEE-TTEEEE-------------EEEEEEEEEE-GGGSHHHHH
T ss_pred ccccccccccccccccccccc-----------cccccchhhcccccc-------------ccccccccceeeeccccccc
Confidence 999999999999999999863 124589999999999 68999999999999999999
Q ss_pred HHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhccc-CCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHH
Q 003049 384 MRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGME-DPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL 462 (853)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~-~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~ 462 (853)
.+.+..+..+.+..++....+...++.++++.+.+.+..+.. ....++...+..++.+++.++|++||+.++++...+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~ 212 (230)
T PF00122_consen 133 LQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAA 212 (230)
T ss_dssp HHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHH
Confidence 999887776667676666655555443333332222222111 2356778889999999999999999999999999999
Q ss_pred HHHHhcceeccCCCCcc
Q 003049 463 IALARRGIFCTEPFRIP 479 (853)
Q Consensus 463 ~~l~k~~I~~~~~~~i~ 479 (853)
.+|.|+||+|+++..+|
T Consensus 213 ~~~~~~~i~v~~~~a~E 229 (230)
T PF00122_consen 213 RRLAKNGIIVKNLSALE 229 (230)
T ss_dssp HHHHHTTEEESSTTHHH
T ss_pred HHHHHCCEEEeCccccc
Confidence 99999999999998876
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=4.1e-26 Score=236.19 Aligned_cols=211 Identities=31% Similarity=0.376 Sum_probs=150.9
Q ss_pred ccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcc
Q 003049 484 VDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEK 563 (853)
Q Consensus 484 vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~ 563 (853)
|+++|||||||||++++.+ .. ........++.+. . ..+.||+..++..+.......
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~------------~~~~~~~~~~~~~--~----~~s~~p~~~~~~~~~~~~~~~--- 56 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP------------PSNEAALAIAAAL--E----QGSEHPIGKAIVEFAKNHQWS--- 56 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES------------CSHHHHHHHHHHH--H----CTSTSHHHHHHHHHHHHHHHH---
T ss_pred CeEEEEecCCCcccCeEEE---Ee------------ccHHHHHHHHHHh--h----hcCCCcchhhhhhhhhhccch---
Confidence 6899999999999999998 10 1122222222222 1 345789999998876432100
Q ss_pred cccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeC
Q 003049 564 AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSL 643 (853)
Q Consensus 564 ~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l 643 (853)
. . +.-...++ .++ ......+. +. |+++.+....... ............+|.+++.++.
T Consensus 57 ----~---~-~~~~~~~~-----~~~-~~~~~~~~---~~-g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 114 (215)
T PF00702_consen 57 ----K---S-LESFSEFI-----GRG-ISGDVDGI---YL-GSPEWIHELGIRV-ISPDLVEEIQESQGRTVIVLAV--- 114 (215)
T ss_dssp ----S---C-CEEEEEET-----TTE-EEEEEHCH---EE-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCEEEEE---
T ss_pred ----h---h-hhhheeee-----ecc-cccccccc---cc-ccchhhhhccccc-cccchhhhHHHhhCCcccceee---
Confidence 0 0 11111111 111 11111111 22 9999998877442 1222333344666777776664
Q ss_pred CCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEcc
Q 003049 644 PDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCP 723 (853)
Q Consensus 644 ~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~ 723 (853)
++.++|.+.+.|++||+++++|++|+++|++++|+|||+..+|.++|+++||.+.
T Consensus 115 ------------------~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------- 169 (215)
T PF00702_consen 115 ------------------NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------- 169 (215)
T ss_dssp ------------------SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------
T ss_pred ------------------cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------
Confidence 6789999999999999999999999999999999999999999999999999521
Q ss_pred CCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEee--ChhhH--HHHHHHHH
Q 003049 724 VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARV--APEQK--ELILTTFK 799 (853)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~--sP~qK--~~iV~~Lq 799 (853)
.|||++ +|++| ..+++.||
T Consensus 170 ---------------------------------------------------------~v~a~~~~kP~~k~~~~~i~~l~ 192 (215)
T PF00702_consen 170 ---------------------------------------------------------IVFARVIGKPEPKIFLRIIKELQ 192 (215)
T ss_dssp ---------------------------------------------------------EEEESHETTTHHHHHHHHHHHHT
T ss_pred ---------------------------------------------------------cccccccccccchhHHHHHHHHh
Confidence 699999 99999 99999999
Q ss_pred HcCCEEEEEcCCcccHHHHHhCC
Q 003049 800 AVGRMTLMCGDGTNDVGALKQAH 822 (853)
Q Consensus 800 ~~g~~v~m~GDG~ND~~ALk~Ad 822 (853)
..++.|+|+|||.||++|||+||
T Consensus 193 ~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 193 VKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp CTGGGEEEEESSGGHHHHHHHSS
T ss_pred cCCCEEEEEccCHHHHHHHHhCc
Confidence 77779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.47 E-value=1.6e-13 Score=123.88 Aligned_cols=101 Identities=25% Similarity=0.367 Sum_probs=91.9
Q ss_pred ceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCccccccc
Q 003049 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQY 743 (853)
Q Consensus 664 ~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~ 743 (853)
...+.++---++=++++++|++|++. +++.+.|||..-+-...|+-+||...
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 34566666777888999999999999 99999999999999999999998632
Q ss_pred chhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc
Q 003049 744 SEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV 823 (853)
Q Consensus 744 ~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV 823 (853)
+|||...|+.|..+|+.|++.++.|.|+|||+||.+||+.||+
T Consensus 72 -------------------------------------rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADl 114 (152)
T COG4087 72 -------------------------------------RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADL 114 (152)
T ss_pred -------------------------------------eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhccc
Confidence 7999999999999999999999999999999999999999999
Q ss_pred eEEecc
Q 003049 824 GVALLN 829 (853)
Q Consensus 824 GIAl~~ 829 (853)
||-...
T Consensus 115 GI~tiq 120 (152)
T COG4087 115 GICTIQ 120 (152)
T ss_pred ceEEec
Confidence 997753
No 37
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.21 E-value=1e-11 Score=109.97 Aligned_cols=73 Identities=40% Similarity=0.496 Sum_probs=56.6
Q ss_pred ccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccC
Q 003049 541 LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDL 617 (853)
Q Consensus 541 ~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~i 617 (853)
..|||.|.|++.++.+.-...+ .......+++++.+||+|++|||+|+++.++.+++++|||||.|+++|+.+
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~----~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGID----IKEIRSKYKIVAEIPFDSERKRMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCc----HHHHHhhcceeEEEccCcccceeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 8999999999999764311101 111235688999999999999999999943457779999999999999763
No 38
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.81 E-value=1.1e-08 Score=105.01 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=80.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--CeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
+++|++++.|+.|++.+ +++++||-....+..+++++||..- +.+..+.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~---------------------------- 118 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD---------------------------- 118 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEec----------------------------
Confidence 68999999999999975 9999999999999999999999621 0000000
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
.-.+||. .. ..|+.|..+++.+++.|..+.|+|||.||.+|++.|++||++...
T Consensus 119 ----~g~~tG~-------------------~~--~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 119 ----SDRVVGY-------------------QL--RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred ----CCeeECe-------------------ee--cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 0012332 11 357889999999999998899999999999999999999999543
No 39
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.61 E-value=2.5e-07 Score=95.42 Aligned_cols=108 Identities=21% Similarity=0.271 Sum_probs=84.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.+++|++.+.++.++++|++|+++||-...-+..+|+++|+...-...+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~----------------------------- 126 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEI----------------------------- 126 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEE-----------------------------
Confidence 689999999999999999999999999999999999999997421111100
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeCh-hhHHHHHHHHHH-cCCE---EEEEcCCcccHHHHHhCCceEEe
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP-EQKELILTTFKA-VGRM---TLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP-~qK~~iV~~Lq~-~g~~---v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.+ . ++|| +|..+... +.|...++.+.+ .|.. +.++|||.||.|+|+.|+.+|++
T Consensus 127 ~d-G-~ltG-------------------~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 127 DD-G-KLTG-------------------RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred eC-C-EEec-------------------eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 01 1 4555 45655555 789988866655 5665 89999999999999999999999
Q ss_pred ccC
Q 003049 828 LNA 830 (853)
Q Consensus 828 ~~~ 830 (853)
...
T Consensus 186 n~~ 188 (212)
T COG0560 186 NPK 188 (212)
T ss_pred CcC
Confidence 543
No 40
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.51 E-value=4.5e-07 Score=94.11 Aligned_cols=167 Identities=13% Similarity=0.094 Sum_probs=98.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-----CeEEEccCCCCceeEeecCCccccccc--ch
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-----PVLILCPVKNGKVYEWVSPDETEKIQY--SE 745 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-----~~~il~~~~~~~~~~~~~~~~~~~~~~--~~ 745 (853)
..+-+.+.++|++|++.|++++++||.+...+..+++++++... ..++.+..+ .+.+........... ..
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~---~~~~~~~~~~~~~~~~~~~ 93 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKE---DIFLANMEEEWFLDEEKKK 93 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCC---cEEEecccchhhHHHhhhh
Confidence 34888999999999999999999999999999999999997521 223333211 122211111100000 00
Q ss_pred ----hhh-ccccCc-eeEEEehhhhHHhhcchhHHhhcccce-----EEEeeC--hhhHHHHHHHHHH-cCC---EEEEE
Q 003049 746 ----KEV-EGLTDA-HDLCIGGDCFEMLQQTSAVLRVIPYVK-----VFARVA--PEQKELILTTFKA-VGR---MTLMC 808 (853)
Q Consensus 746 ----~~~-~~~~~~-~~l~itG~~l~~l~~~~~~~~~~~~~~-----VfAr~s--P~qK~~iV~~Lq~-~g~---~v~m~ 808 (853)
... ...... ..+..+++..+.+.. .+... ... .+..+. ...|...++.+.+ .|. .++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i 169 (215)
T TIGR01487 94 RFPRDRLSNEYPRASLVIMREGKDVDEVRE--IIKER--GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI 169 (215)
T ss_pred hhhhhhcccccceeEEEEecCCccHHHHHH--HHHhC--CeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 000 000011 111223333222221 11110 111 122333 3589988888765 343 48999
Q ss_pred cCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 809 GDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 809 GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
||+.||.+|++.|+.|+||+++.+..++.++.++..++
T Consensus 170 GDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 170 GDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPY 207 (215)
T ss_pred CCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCC
Confidence 99999999999999999999999886666555554333
No 41
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.48 E-value=3.9e-07 Score=99.86 Aligned_cols=114 Identities=22% Similarity=0.336 Sum_probs=81.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.+.|+.|++.|+++.++||.....+..+.+++|+..- .. +.+..
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~----~a-----n~lei-------------------- 230 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA----VA-----NELEI-------------------- 230 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE----EE-----eEEEE--------------------
Confidence 36899999999999999999999999998888999999998521 00 00000
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+-.+||.... .+ +..+.|...++.+.+ .| ..+.|+|||.||.+|++.|++|||+
T Consensus 231 --~dg~ltg~v~g---------------~i---v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~- 289 (322)
T PRK11133 231 --MDGKLTGNVLG---------------DI---VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY- 289 (322)
T ss_pred --ECCEEEeEecC---------------cc---CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-
Confidence 00011221100 00 234678888887765 44 5699999999999999999999999
Q ss_pred cCCCcCcc
Q 003049 829 NAVPPTQS 836 (853)
Q Consensus 829 ~~~~~~~~ 836 (853)
++.+..++
T Consensus 290 nAkp~Vk~ 297 (322)
T PRK11133 290 HAKPKVNE 297 (322)
T ss_pred CCCHHHHh
Confidence 77776433
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.43 E-value=2.3e-06 Score=91.78 Aligned_cols=175 Identities=21% Similarity=0.224 Sum_probs=99.3
Q ss_pred eEeeecCC-CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCCCceeEeecCCcccc
Q 003049 667 GFAVFNCP-IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGKVYEWVSPDETEK 740 (853)
Q Consensus 667 G~l~~~d~-lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~~~~~~~~~~~~~ 740 (853)
|.+.-.+. +.+.++++|+++++.|++++++||.....+..+.+++++.. +...+.... ..+.-...+....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~---~~i~~~~l~~~~~ 88 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGG---ELLFQKPLSREDV 88 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCC---cEEeeecCCHHHH
Confidence 33334444 89999999999999999999999999999999999999974 122222210 0000000000000
Q ss_pred ------------c---cc-------------ch-------------hhhccccC--ceeEEEehhhhHHhhcchhHHhhc
Q 003049 741 ------------I---QY-------------SE-------------KEVEGLTD--AHDLCIGGDCFEMLQQTSAVLRVI 777 (853)
Q Consensus 741 ------------~---~~-------------~~-------------~~~~~~~~--~~~l~itG~~l~~l~~~~~~~~~~ 777 (853)
. .. .. ........ ...+...-+.+..+. ..+.+..
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~ 166 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELV--EALRKRF 166 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHH--HHHhhhc
Confidence 0 00 00 00000000 000111111111111 1122222
Q ss_pred c-cceEEEeeCh---------hhHHHHHHHHHH-cCCE---EEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccc
Q 003049 778 P-YVKVFARVAP---------EQKELILTTFKA-VGRM---TLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (853)
Q Consensus 778 ~-~~~VfAr~sP---------~qK~~iV~~Lq~-~g~~---v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~ 843 (853)
. ....+.+..| ..|..-++.|.+ .|.. |+++||+.||.+||+.|..||||++|.+..++.++..+.
T Consensus 167 ~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~ 246 (264)
T COG0561 167 PDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTT 246 (264)
T ss_pred cccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccC
Confidence 2 2233333333 369888888876 6665 999999999999999999999999998876555554434
Q ss_pred ccc
Q 003049 844 SKD 846 (853)
Q Consensus 844 ~~~ 846 (853)
.++
T Consensus 247 ~n~ 249 (264)
T COG0561 247 SND 249 (264)
T ss_pred Ccc
Confidence 443
No 43
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=98.41 E-value=2.3e-07 Score=77.76 Aligned_cols=61 Identities=16% Similarity=0.322 Sum_probs=51.1
Q ss_pred CCcccccccc--ccCCCCcHHHHHHHHHhcCCccccc-CCccHHHHHHHHhhchhHHHHHhhhhh
Q 003049 151 PTKETFGYYL--KCTGHSTEAKIAVATEKWGRNVFEY-PQPTFQKLMKENCMEPFFVFQVFCVGL 212 (853)
Q Consensus 151 ~~~~~~~~~~--~~~GLs~~~~~~~~~~~yG~N~~~~-~~~~~~~l~~~~~~~pf~vf~i~~~~l 212 (853)
+.++.++.++ ...||+++ |+++|+++||+|++.. +.++++.+|.+++.+||.++++++.++
T Consensus 5 ~~~~v~~~l~t~~~~GLs~~-ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aail 68 (69)
T PF00690_consen 5 SVEEVLKRLNTSSSQGLSSE-EVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAIL 68 (69)
T ss_dssp SHHHHHHHHTTBTSSBBTHH-HHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred CHHHHHHHHCcCCCCCCCHH-HHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4455566675 36899997 9999999999999954 567999999999999999998887765
No 44
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.38 E-value=4.4e-06 Score=89.83 Aligned_cols=59 Identities=27% Similarity=0.347 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
-.|..-++.|.+ .| ..|+++|||.||.+||+.|++||||++|.+..++.++.++..+++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCc
Confidence 368777777765 34 348999999999999999999999999999877766666554443
No 45
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.36 E-value=7.1e-07 Score=88.49 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=72.4
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
..|+.|++.|+++.++|+.+...+....+.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 68999999999999999999999999999999961
Q ss_pred hhhhHHhhcchhHHhhcccceEEEee--ChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARV--APEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~--sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~ 838 (853)
.|... .|+--..+++.++-....++|+||+.||.+|++.|++++||.++.+..++..
T Consensus 76 ---------------------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A 134 (169)
T TIGR02726 76 ---------------------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA 134 (169)
T ss_pred ---------------------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence 11111 2333344444443333569999999999999999999999999988755444
Q ss_pred ccc
Q 003049 839 SSS 841 (853)
Q Consensus 839 ~~~ 841 (853)
+.+
T Consensus 135 ~~I 137 (169)
T TIGR02726 135 AYV 137 (169)
T ss_pred CEE
Confidence 333
No 46
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.36 E-value=1.4e-06 Score=91.38 Aligned_cols=169 Identities=14% Similarity=0.082 Sum_probs=94.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-----CeEEEccCCCCceeEeecCCccc-ccccchhh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-----PVLILCPVKNGKVYEWVSPDETE-KIQYSEKE 747 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-----~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~~ 747 (853)
++-+.+.++|++|++.|++++++||.....+..+++++|+... ...+.+...+ ..+.....+... .+..-...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG-KRIFLGDIEECEKAYSELKKR 98 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC-CEEEEcchHHHHHHHHHHHHh
Confidence 3788999999999999999999999999999999999998521 1222221111 111111111000 00000000
Q ss_pred h-------ccccC---ceeEE-EehhhhHHhhcchhHHhhcccce-----EEEeeChhh--HHHHHHHHHH-cC---CEE
Q 003049 748 V-------EGLTD---AHDLC-IGGDCFEMLQQTSAVLRVIPYVK-----VFARVAPEQ--KELILTTFKA-VG---RMT 805 (853)
Q Consensus 748 ~-------~~~~~---~~~l~-itG~~l~~l~~~~~~~~~~~~~~-----VfAr~sP~q--K~~iV~~Lq~-~g---~~v 805 (853)
. ..... ...+. .+....+.+. +.+.+.-.... .+....|.. |..-++.+.+ .| ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~ 176 (230)
T PRK01158 99 FPEASTSLTKLDPDYRKTEVALRRTVPVEEVR--ELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV 176 (230)
T ss_pred ccccceeeecCCcccccceeeecccccHHHHH--HHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 0 00000 00111 1111111111 11111111111 233555554 8887777765 33 348
Q ss_pred EEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccc
Q 003049 806 LMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASK 845 (853)
Q Consensus 806 ~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~ 845 (853)
+++|||.||.+|++.|++|+||+++.+..++.+..++..+
T Consensus 177 i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n 216 (230)
T PRK01158 177 AAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216 (230)
T ss_pred EEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCC
Confidence 9999999999999999999999999998666555544433
No 47
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.35 E-value=1.2e-06 Score=91.23 Aligned_cols=125 Identities=24% Similarity=0.306 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++++.++.|++.|+++.++||.+...+..+++.+|+..- +.. .+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~----~~~-----~~~~~-------------------- 135 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA----FAN-----RLEVE-------------------- 135 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce----Eee-----EEEEE--------------------
Confidence 6899999999999999999999999999999999999998631 000 00000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEe-eChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr-~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
+-.++|. +.++ ..+..|..+++.+.+ .| ..+.|+||+.||..|+++|++++++.
T Consensus 136 --~~~~~~~-------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~ 194 (219)
T TIGR00338 136 --DGKLTGL-------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194 (219)
T ss_pred --CCEEEEE-------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC
Confidence 0001110 1111 123346666665544 33 24889999999999999999999984
Q ss_pred cCCCcCcccccccccccccCCcc
Q 003049 829 NAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
+.+ .....++.++.+.+|.+
T Consensus 195 -~~~--~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 195 -AKP--KLQQKADICINKKDLTD 214 (219)
T ss_pred -CCH--HHHHhchhccCCCCHHH
Confidence 333 24445666666665543
No 48
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.33 E-value=1.4e-06 Score=88.24 Aligned_cols=92 Identities=17% Similarity=0.176 Sum_probs=71.4
Q ss_pred cchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCcee
Q 003049 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD 756 (853)
Q Consensus 677 ~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (853)
+++.+.|+.++++|++++++||+....+.++|+.+|+......-... ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~----------------------------- 141 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDN----------------------------- 141 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECT-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eec-----------------------------
Confidence 78889999999999999999999999999999999997432111100 000
Q ss_pred EEEehhhhHHhhcchhHHhhcccceEEEeeChh-h--HHHHHHHH------HHcCCEEEEEcCCcccHHHHH
Q 003049 757 LCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE-Q--KELILTTF------KAVGRMTLMCGDGTNDVGALK 819 (853)
Q Consensus 757 l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~-q--K~~iV~~L------q~~g~~v~m~GDG~ND~~ALk 819 (853)
......+|.+|. + |...++.+ +.....+.++|||.||.+|||
T Consensus 142 ---------------------~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 142 ---------------------GGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ---------------------TCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred ---------------------ccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 012456677766 4 99999999 445788999999999999997
No 49
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.31 E-value=1.9e-06 Score=84.52 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=66.8
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+|++|++.|+++.++||++...+..+++++|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999851
Q ss_pred hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHH-HHc---CCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KAV---GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~L-q~~---g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.|... ..|...++.+ ++. ...++|+||+.||.+|++.|++++++.++.+..+.
T Consensus 70 --------------------~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~ 126 (154)
T TIGR01670 70 --------------------LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIP 126 (154)
T ss_pred --------------------EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHH
Confidence 11111 1233333333 333 35699999999999999999999999988775433
No 50
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.27 E-value=9.3e-06 Score=87.50 Aligned_cols=166 Identities=17% Similarity=0.181 Sum_probs=95.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCCCc-------------------
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGK------------------- 728 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~------------------- 728 (853)
..+-+.++++|++|++.|+++++.||.+...+..+.+++|+.. +...+.+..+...
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 4588999999999999999999999999999999999999852 2233332111000
Q ss_pred ---eeEeecCCcccccccchhh---------------hccc--cCceeEEEehh--hhHHhhcchhHHhhcc-cceE---
Q 003049 729 ---VYEWVSPDETEKIQYSEKE---------------VEGL--TDAHDLCIGGD--CFEMLQQTSAVLRVIP-YVKV--- 782 (853)
Q Consensus 729 ---~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~~~l~itG~--~l~~l~~~~~~~~~~~-~~~V--- 782 (853)
.+.+...+........... ...+ ..-..+++-++ .++.+. ..+.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~--~~l~~~~~~~~~~~~s 175 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQ--IQLNEALGERAHLCFS 175 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHH--HHHHHHhcCCEEEEEc
Confidence 0000000000000000000 0000 00112222221 111111 11222221 1121
Q ss_pred ---EEeeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccc
Q 003049 783 ---FARVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSS 840 (853)
Q Consensus 783 ---fAr~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~ 840 (853)
+-.+.|. .|..-++.|.+ .| ..|+.+|||-||.+||+.|+.||||++|.+..++.++.
T Consensus 176 ~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~ 242 (272)
T PRK15126 176 ATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPH 242 (272)
T ss_pred CCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCC
Confidence 2345555 49888888865 34 35899999999999999999999999999987665543
No 51
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.25 E-value=2.6e-06 Score=88.94 Aligned_cols=170 Identities=16% Similarity=0.154 Sum_probs=95.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-----CeEEEccCCCCceeEeec-CCcccc------c
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-----PVLILCPVKNGKVYEWVS-PDETEK------I 741 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-----~~~il~~~~~~~~~~~~~-~~~~~~------~ 741 (853)
.+-+.++++|++|++.|++++++||.+...+..+++++|+... ...+.+... ....|.. .+.... .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~--~~~~~~~~~~~~~~~~~~~~~ 92 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEG--MDDIFLAYLEEEWFLDIVIAK 92 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCC--CceEEecccCHHHHHHHHHhc
Confidence 4778899999999999999999999999999999999995321 112222111 0112221 111000 0
Q ss_pred ccc-hhhhcccc-CceeEE-EehhhhHHhhcchhHHhhcccce-----EEEeeCh--hhHHHHHHHHHH-cC---CEEEE
Q 003049 742 QYS-EKEVEGLT-DAHDLC-IGGDCFEMLQQTSAVLRVIPYVK-----VFARVAP--EQKELILTTFKA-VG---RMTLM 807 (853)
Q Consensus 742 ~~~-~~~~~~~~-~~~~l~-itG~~l~~l~~~~~~~~~~~~~~-----VfAr~sP--~qK~~iV~~Lq~-~g---~~v~m 807 (853)
... ........ ...... ......+.+.. .+..+-.... .+....| ..|..-++.+.+ .| ..|++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~ 170 (225)
T TIGR01482 93 TFPFSRLKVQYPRRASLVKMRYGIDVDTVRE--IIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLV 170 (225)
T ss_pred ccchhhhccccccccceEEEeecCCHHHHHH--HHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE
Confidence 000 00000000 001111 11111111110 0111101111 1233444 378888877755 34 45899
Q ss_pred EcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 808 CGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 808 ~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
+||+.||.+||+.|++|+||+++.+..++.++..+..+++
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 9999999999999999999999999866666656554443
No 52
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.24 E-value=5e-06 Score=86.23 Aligned_cols=112 Identities=15% Similarity=0.158 Sum_probs=76.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~---i~~n----------------------------- 116 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR---IYCN----------------------------- 116 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc---EEec-----------------------------
Confidence 57899999999999999999999999999999999988744211 1100
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEE--EeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF--ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf--Ar~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+.++|..+..-. ++-..+ .......|..+++.++.....+.|+|||.||..|++.||+++|=+
T Consensus 117 ---~~~~~~~~~~~~~---------p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 117 ---EADFSNEYIHIDW---------PHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ---eeEeeCCeeEEeC---------CCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 0011111100000 000000 001134799999999888888999999999999999999988754
No 53
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.23 E-value=6.5e-06 Score=84.13 Aligned_cols=109 Identities=20% Similarity=0.211 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.+.++.|++.|+++.++||-....+..+++.+|+..--...+...+..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 689999999999999999999999999999999999999742100000000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
..++ ..+-.+.|..|..+++.+.+ .| ..+.|+||+.||.+|+++|++++++..
T Consensus 134 ----~~~p-------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 134 ----FIQP-------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGD 190 (201)
T ss_pred ----eEec-------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECC
Confidence 0000 11223556778777776654 33 348999999999999999999999964
Q ss_pred CC
Q 003049 830 AV 831 (853)
Q Consensus 830 ~~ 831 (853)
+.
T Consensus 191 ~~ 192 (201)
T TIGR01491 191 EG 192 (201)
T ss_pred Cc
Confidence 43
No 54
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.18 E-value=6.6e-06 Score=84.57 Aligned_cols=103 Identities=19% Similarity=0.185 Sum_probs=78.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--CeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
.++.|++++.++.|+++ +++.++||-....+..+.+++|+..- .....+.
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------------------- 118 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDE--------------------------- 118 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECC---------------------------
Confidence 35789999999999999 99999999999999999999998521 0000000
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
+-.++|. . -..|+.|...++.++..+..++|+|||.||..|.++|++|++.+.
T Consensus 119 -----~~~i~~~------------------~---~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 119 -----DGMITGY------------------D---LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRP 171 (205)
T ss_pred -----CCeEECc------------------c---ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECC
Confidence 0001111 0 124778999999999888999999999999999999999998754
No 55
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.16 E-value=2.6e-06 Score=70.24 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=45.6
Q ss_pred cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhc
Q 003049 162 CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWC 214 (853)
Q Consensus 162 ~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~ 214 (853)
..||+++ ++++|+++||+|++..+. ++++.++++++.+|+.++++++.++++
T Consensus 8 ~~GLs~~-~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~ 60 (64)
T smart00831 8 ESGLSSE-EAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSA 60 (64)
T ss_pred ccCCCHH-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3599987 999999999999998875 789999999999999988887776654
No 56
>PRK10976 putative hydrolase; Provisional
Probab=98.16 E-value=2.5e-05 Score=83.81 Aligned_cols=172 Identities=16% Similarity=0.100 Sum_probs=96.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCCC--------------------
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNG-------------------- 727 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~-------------------- 727 (853)
..+-+.++++|++|+++|+++++.||.+...+..+.+++|+.. +...+.+.++..
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 3588899999999999999999999999999999999999752 223333211100
Q ss_pred --c-eeEeecCCcccccccchh---hhc------------ccc--CceeEEEeh---hhhHHhhcchhHHhhcc-cceE-
Q 003049 728 --K-VYEWVSPDETEKIQYSEK---EVE------------GLT--DAHDLCIGG---DCFEMLQQTSAVLRVIP-YVKV- 782 (853)
Q Consensus 728 --~-~~~~~~~~~~~~~~~~~~---~~~------------~~~--~~~~l~itG---~~l~~l~~~~~~~~~~~-~~~V- 782 (853)
. .+.+...+.......... ... .+. .-..+.+.. +.++.+. +.+.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~--~~l~~~~~~~~~~~ 175 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLE--QAINARWGDRVNVS 175 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHH--HHHHHHhCCcEEEE
Confidence 0 000000000000000000 000 000 011122211 1111111 11222111 1221
Q ss_pred -----EEeeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccc--ccccccc
Q 003049 783 -----FARVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS--SSEASKD 846 (853)
Q Consensus 783 -----fAr~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~--~~~~~~~ 846 (853)
+-.+.|. .|..-++.|.+ .| ..|+++|||.||.+||+.|+.||||++|.+..++.++ .++..++
T Consensus 176 ~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~ 252 (266)
T PRK10976 176 FSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNA 252 (266)
T ss_pred EeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCc
Confidence 2344554 58888887765 44 3489999999999999999999999999998766654 3444443
No 57
>PLN02887 hydrolase family protein
Probab=98.15 E-value=2.6e-05 Score=91.72 Aligned_cols=58 Identities=31% Similarity=0.379 Sum_probs=45.8
Q ss_pred hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 790 QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 790 qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
.|..-|+.|.+ .| .-|+++|||.||.+||+.|+.||||+||.+..++.++.++..+++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdE 568 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDE 568 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCc
Confidence 46666666654 34 248999999999999999999999999999877777766665554
No 58
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.12 E-value=2.4e-05 Score=82.42 Aligned_cols=174 Identities=18% Similarity=0.222 Sum_probs=97.7
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCC--------------------
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKN-------------------- 726 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~-------------------- 726 (853)
...+-+.+.++|++|+++|+++++.||.++..+..+.+++++.. ++..+......
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577899999999999999999999999999999999999862 12222010000
Q ss_pred --CceeEeecCCccccccc-ch------------------hhhccccCceeEEEeh--hhhHHhhcchhHHhhcccceEE
Q 003049 727 --GKVYEWVSPDETEKIQY-SE------------------KEVEGLTDAHDLCIGG--DCFEMLQQTSAVLRVIPYVKVF 783 (853)
Q Consensus 727 --~~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~l~itG--~~l~~l~~~~~~~~~~~~~~Vf 783 (853)
...+.+...+....... .. ........-..+.+.+ +.+..+. +.+.+.......+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~--~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLR--EELKKKFPNLIDV 170 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHH--HHHHHHHTTTEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhh--hhhccccCcceeE
Confidence 00011111000000000 00 0000000111122221 1222221 1233333221122
Q ss_pred E-------eeCh--hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 784 A-------RVAP--EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 784 A-------r~sP--~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
. .++| -.|..-++.|.+ .| ..++++||+.||.+||+.|+.|+||+++++..+..++..+...++
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 2 3334 478888888765 33 468999999999999999999999999999866666555544443
No 59
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.06 E-value=5.5e-06 Score=80.87 Aligned_cols=106 Identities=19% Similarity=0.214 Sum_probs=75.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCC----eEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP----VLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~----~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
.+-|++++.++.|++.|.++.++||--..-+..||.++||...+ .+..+.++.-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 35789999999999999999999999999999999999998432 1111111100
Q ss_pred cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc--CCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV--GRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~--g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.+++... .-....-|..+|..+++. -..++|+|||+||.+|+.-||.=|+.
T Consensus 146 ---------~gfd~~~------------------ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~ 198 (227)
T KOG1615|consen 146 ---------LGFDTNE------------------PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGF 198 (227)
T ss_pred ---------cccccCC------------------ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhcc
Confidence 0000000 001234699999999882 24689999999999999997776666
Q ss_pred c
Q 003049 828 L 828 (853)
Q Consensus 828 ~ 828 (853)
+
T Consensus 199 ~ 199 (227)
T KOG1615|consen 199 G 199 (227)
T ss_pred C
Confidence 4
No 60
>PF12409 P5-ATPase: P5-type ATPase cation transporter
Probab=98.06 E-value=5.1e-06 Score=77.55 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=50.3
Q ss_pred chhhHHHHHHHHHHHHHhhcccccccceeEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecc
Q 003049 50 DAAIVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQ 114 (853)
Q Consensus 50 ~~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~ 114 (853)
..+.+++++++++ +++|++||+|+|+.+++|++| ++++||||+|.. ..|..+++++.....
T Consensus 17 ~~l~~~l~ilT~G-ll~L~~~W~p~~~~~~~~~~c-~l~~A~~vlI~~--~~~~~~i~~v~~~~~ 77 (119)
T PF12409_consen 17 TILYYFLCILTLG-LLYLVFRWFPKWWLKLTFKKC-SLEEADHVLIED--QDGEYEIVKVQKITY 77 (119)
T ss_pred HHHHHHHHHHHHH-HHHHHHhhHHHhheeeeEeEC-CHHHCcEEEEEe--CCCCEEEEEEEEEEC
Confidence 3456677777774 558999999999999999998 699999999985 457889999987544
No 61
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.04 E-value=1.3e-05 Score=80.93 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=76.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++++++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..++.... .+.. ++
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~-----~~~~-~g--------------- 129 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPA-----SFDN-DG--------------- 129 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCc-----eECC-CC---------------
Confidence 58999999999999999999999999999999999999998532111111100 0000 00
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEe-eChhhHHHHHHHHHHc-CCEEEEEcCCcccHHHHHhCCceEE
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKAV-GRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr-~sP~qK~~iV~~Lq~~-g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
.+++. -.++.++.. .....|..+++.+++. ...+.|+|||.||..|.++||+=.|
T Consensus 130 -----~~~~~--------------~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 130 -----RHIVW--------------PHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred -----cEEEe--------------cCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 00000 000111111 1223589999999887 8889999999999999999987543
No 62
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.02 E-value=7.5e-05 Score=80.29 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=38.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+-+.++++|++|++.|+++++.||.+...+..+++++++.
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47889999999999999999999999999999999999875
No 63
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.00 E-value=7.9e-05 Score=79.53 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=36.9
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.-+.++++|++|++.|++++++||..+..+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456999999999999999999999999999999999974
No 64
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.00 E-value=1.3e-05 Score=80.28 Aligned_cols=99 Identities=22% Similarity=0.224 Sum_probs=70.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--CeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
+++|++.+.++.+++.|++++++||.+...+..+++.+|+..- ..+..+ ++
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~--~~------------------------- 125 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFD--DN------------------------- 125 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEEC--CC-------------------------
Confidence 3689999999999999999999999999999999999998521 000000 00
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc----CCEEEEEcCCcccHHHHHhC
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV----GRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~----g~~v~m~GDG~ND~~ALk~A 821 (853)
. .++|.... . ....+..|..+++.+++. ...+.|+|||.||.+|++.|
T Consensus 126 ---g--~~~g~~~~---------------~--~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 126 ---G--LLTGPIEG---------------Q--VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ---C--EEeCccCC---------------c--ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 0 12221000 0 124567899999887653 24589999999999999876
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.96 E-value=0.00011 Score=79.39 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=39.2
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+.+.++++++|++|++.|++++++||.....+..+++++|+.
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 3456778999999999999999999999999999999999986
No 66
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.95 E-value=2.3e-05 Score=79.18 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=65.8
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
.+|+.|++.|+++.++||.+...+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999999851
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHH-HHHcC---CEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTT-FKAVG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~-Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
+|. ..+.|...++. +++.| ..++|+||+.||.+|++.|.++++++++.+.
T Consensus 90 ---------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~ 143 (183)
T PRK09484 90 ---------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPL 143 (183)
T ss_pred ---------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHH
Confidence 121 11234444433 34444 3599999999999999999999998765543
No 67
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.93 E-value=3.2e-05 Score=80.50 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.+.++.|++.|+++.++||-+...+..+.+.+ +......-.+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~------------------------------- 121 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNG------------------------------- 121 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeE-------------------------------
Confidence 68999999999999999999999999999999999988 6431111000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEE---EeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEE
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVF---ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf---Ar~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
..++|+.+..-.. +-... .++ ...|..+++.++.....+.|+|||.||..|.++||+.++
T Consensus 122 ---~~~~~~~~~~~kp---------~p~~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 122 ---SDFSGEYITITWP---------HPCDEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ---EEecCCeeEEecc---------CCccccccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 0111111000000 00000 001 123788888888777789999999999999999999777
No 68
>PLN02954 phosphoserine phosphatase
Probab=97.90 E-value=5.1e-05 Score=79.14 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=39.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+++|++.++++.|++.|+++.++||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999996
No 69
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.85 E-value=5.3e-05 Score=77.65 Aligned_cols=109 Identities=12% Similarity=0.071 Sum_probs=77.5
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
..++++++.+.|+.+++.|++++++||-....+..+++.+|+..- +.. .+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~----~~~-----~l~~------------------- 136 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA----IGT-----RLEE------------------- 136 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce----Eec-----ceEE-------------------
Confidence 457899999999999999999999999999999999999998521 000 0000
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHH-HcCC---EEEEEcCCcccHHHHHhCCceEEe
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVGR---MTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq-~~g~---~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
..+-..+|+... -.+.++.|...++.+. +.|. .+.++||+.||.++++.|+.++++
T Consensus 137 --~~~g~~~g~~~~------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 137 --SEDGIYTGNIDG------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred --cCCCEEeCCccC------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 000012222100 1234677888777654 3453 578999999999999999999988
Q ss_pred c
Q 003049 828 L 828 (853)
Q Consensus 828 ~ 828 (853)
.
T Consensus 197 ~ 197 (202)
T TIGR01490 197 N 197 (202)
T ss_pred C
Confidence 5
No 70
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.83 E-value=0.00024 Score=75.79 Aligned_cols=42 Identities=12% Similarity=0.201 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++-+++.++|++|++.|++++++||.+...+..+.+++|+.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 357889999999999999999999999999999999999875
No 71
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.78 E-value=0.00048 Score=74.20 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=37.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+-+.++++|++|++.||++++.||.....+..+++++|+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 34567999999999999999999999999999999999984
No 72
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.64 E-value=0.00018 Score=67.62 Aligned_cols=118 Identities=18% Similarity=0.110 Sum_probs=79.0
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
....++.+++.+.+++|++.|++++++||.+...+..+.+++|+......++....... ..+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~---------------- 82 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAI-YYPK---------------- 82 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhh-hccc----------------
Confidence 34458899999999999999999999999999999999999998422111111100000 0000
Q ss_pred cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHh-CCceEE
Q 003049 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQ-AHVGVA 826 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~-AdVGIA 826 (853)
...........+.+-.|+.+..+.+.+......++|+||+.||+.|++. +.-+|+
T Consensus 83 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 83 ----------------------EGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred ----------------------ccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 0000011123455667777777777776666779999999999999998 555554
No 73
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.50 E-value=0.00048 Score=71.99 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=38.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+..-++++++|++|++.|++++++||..+..+..+++++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455667999999999999999999999999999999999984
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.41 E-value=0.00054 Score=71.32 Aligned_cols=101 Identities=21% Similarity=0.251 Sum_probs=71.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.++||.....+..+.+..|+...-
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----------------------------------- 136 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF----------------------------------- 136 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----------------------------------
Confidence 568999999999999999999999999999999999999985321
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeCh--hhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEecc
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLN 829 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP--~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~~ 829 (853)
+.+++++. +.+..| +--..+++.++.....++|+||+.||+.|.++|++ +|.+..
T Consensus 137 ---~~~~~~~~-------------------~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~ 194 (226)
T PRK13222 137 ---SVVIGGDS-------------------LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTY 194 (226)
T ss_pred ---cEEEcCCC-------------------CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECc
Confidence 11111110 111223 22234444444444669999999999999999998 666654
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
|
T Consensus 195 g 195 (226)
T PRK13222 195 G 195 (226)
T ss_pred C
Confidence 3
No 75
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.39 E-value=0.0019 Score=67.14 Aligned_cols=39 Identities=15% Similarity=0.245 Sum_probs=36.0
Q ss_pred CcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 676 REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 676 r~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-+.++++|++|++.|++++++||..+..+..+++++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
No 76
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.37 E-value=0.00029 Score=66.97 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=72.4
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
..|+.|.++|+++.+|||.+......=|+++||..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47899999999999999999999999999999961
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
+| .--++|....+.|.+ .+ .-|+++||-.||-|+|++...++|..++-+....
T Consensus 77 ---------------------~~--qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~ 133 (170)
T COG1778 77 ---------------------LY--QGISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQ 133 (170)
T ss_pred ---------------------ee--echHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHH
Confidence 22 123456666665554 33 3489999999999999999888888888776444
Q ss_pred cccccc
Q 003049 837 GNSSSE 842 (853)
Q Consensus 837 ~~~~~~ 842 (853)
..+..+
T Consensus 134 ~a~~Vt 139 (170)
T COG1778 134 RADYVT 139 (170)
T ss_pred hhHhhh
Confidence 444433
No 77
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.33 E-value=0.00092 Score=69.64 Aligned_cols=104 Identities=24% Similarity=0.269 Sum_probs=75.7
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
..++=|++++++..|+++|++..++|+++...+..+.+..|+..--..+.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~------------------------------ 136 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIV------------------------------ 136 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEE------------------------------
Confidence 55788999999999999999999999999999999999999974311111
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCC---ceEEec
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH---VGVALL 828 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~Ad---VGIAl~ 828 (853)
+|+.. -...=.|.....+++.+......++|+||..+|.-|=|+|+ ||+..+
T Consensus 137 --------g~~~~-----------------~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 137 --------GGDDV-----------------PPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred --------cCCCC-----------------CCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECC
Confidence 11100 01112455555555555544346999999999999999998 667666
Q ss_pred cC
Q 003049 829 NA 830 (853)
Q Consensus 829 ~~ 830 (853)
.+
T Consensus 192 ~~ 193 (220)
T COG0546 192 YN 193 (220)
T ss_pred CC
Confidence 43
No 78
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.30 E-value=0.002 Score=75.99 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=36.6
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.-+.++++|++|+++|+.+++.||.....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4457899999999999999999999999999999999974
No 79
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.22 E-value=0.00061 Score=72.39 Aligned_cols=162 Identities=16% Similarity=0.179 Sum_probs=92.3
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCc--------eeEeecCCc-----c
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGK--------VYEWVSPDE-----T 738 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~--------~~~~~~~~~-----~ 738 (853)
..+..|...++|+++++.|+.++.+||........+.+++++..++..|. .++... ...|...-+ .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~-~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT-SVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE-cCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 34567899999999999999999999999999999999999875443332 221100 011100000 0
Q ss_pred cc----cccchhhhc--cccCceeEEEeh--hhhHHhhcchhHHhhcc----cceE-EE-----eeCh--hhHHHHHHHH
Q 003049 739 EK----IQYSEKEVE--GLTDAHDLCIGG--DCFEMLQQTSAVLRVIP----YVKV-FA-----RVAP--EQKELILTTF 798 (853)
Q Consensus 739 ~~----~~~~~~~~~--~~~~~~~l~itG--~~l~~l~~~~~~~~~~~----~~~V-fA-----r~sP--~qK~~iV~~L 798 (853)
.. ..+...... .....+.+.+-. +....+. ..+.+.+. .+.+ ++ ...| ..|..-++.|
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l 175 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI--KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYL 175 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH--HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHH
Confidence 00 000000000 011123333322 1211111 11122111 1222 11 3344 4788888888
Q ss_pred HH-cC---CEEEEEcCCcccHHHHHh-CCceEEeccCCCcCcc
Q 003049 799 KA-VG---RMTLMCGDGTNDVGALKQ-AHVGVALLNAVPPTQS 836 (853)
Q Consensus 799 q~-~g---~~v~m~GDG~ND~~ALk~-AdVGIAl~~~~~~~~~ 836 (853)
.+ .| ..|+++||+.||.+||+. +..||+|+++.+..++
T Consensus 176 ~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~ 218 (249)
T TIGR01485 176 LQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQ 218 (249)
T ss_pred HHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHH
Confidence 65 33 468999999999999998 6799999999887543
No 80
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.20 E-value=0.00071 Score=71.25 Aligned_cols=54 Identities=30% Similarity=0.334 Sum_probs=43.7
Q ss_pred eChh--hHHHHHHHHHH-cCC---EEEEEcCCcccHHHHHhCCceEEeccCCCcCccccc
Q 003049 786 VAPE--QKELILTTFKA-VGR---MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839 (853)
Q Consensus 786 ~sP~--qK~~iV~~Lq~-~g~---~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~ 839 (853)
..|. .|...++.|.+ .|. .++++||+.||.+||+.|+.||+|+++.+..++.++
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRH 212 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhc
Confidence 4453 78888888865 442 488999999999999999999999999888655544
No 81
>PRK08238 hypothetical protein; Validated
Probab=97.12 E-value=0.0016 Score=75.26 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
|++|++.+.|+++++.|++++++|+-+...+..+++.+|+.+. ++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~---Vig------------------------------- 117 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG---VFA------------------------------- 117 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE---EEe-------------------------------
Confidence 5789999999999999999999999999999999999998421 111
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
++. ..+..|+.|...+......+ ...|+||..||.++++.|+-.++++.+..
T Consensus 118 -------sd~-------------------~~~~kg~~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 118 -------SDG-------------------TTNLKGAAKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred -------CCC-------------------ccccCCchHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 100 01356677766554322222 15789999999999999999999975443
No 82
>PLN02382 probable sucrose-phosphatase
Probab=96.98 E-value=0.0055 Score=69.90 Aligned_cols=156 Identities=21% Similarity=0.189 Sum_probs=89.8
Q ss_pred chHHHH-HHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCC--------ceeEeecCCcc----c-----
Q 003049 678 DSAKIL-SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNG--------KVYEWVSPDET----E----- 739 (853)
Q Consensus 678 ~a~~~I-~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~--------~~~~~~~~~~~----~----- 739 (853)
....++ +++++.|+..+..||..+..+..+.++.++..+...|.. ++.. ....|...-+. .
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~-nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~ 110 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMS-VGTEIAYGESMVPDHGWVEYLNKKWDREIVVEE 110 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEc-CCcEEEeCCCCccChhHHHHHhccCChhhHHHH
Confidence 345555 889999999999999999999999999998866544432 2110 01111110000 0
Q ss_pred ccccch--hhhccccCceeEEEehh--hhHHhhcchhHHhhcc----cce------EEEeeChh--hHHHHHHHHHHc--
Q 003049 740 KIQYSE--KEVEGLTDAHDLCIGGD--CFEMLQQTSAVLRVIP----YVK------VFARVAPE--QKELILTTFKAV-- 801 (853)
Q Consensus 740 ~~~~~~--~~~~~~~~~~~l~itG~--~l~~l~~~~~~~~~~~----~~~------VfAr~sP~--qK~~iV~~Lq~~-- 801 (853)
...++. .........+.+.+-.+ ....+. +.+.+.+. ++. -+-.+.|. .|..-++.|.+.
T Consensus 111 ~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~--~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 111 TSKFPELKLQPETEQRPHKVSFYVDKKKAQEVI--KELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HhcCCCcccCCcccCCCeEEEEEechHHhHHHH--HHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000000 00000012233333322 222221 12222221 122 13456665 499888888664
Q ss_pred --C---CEEEEEcCCcccHHHHHhCC-ceEEeccCCCcCcc
Q 003049 802 --G---RMTLMCGDGTNDVGALKQAH-VGVALLNAVPPTQS 836 (853)
Q Consensus 802 --g---~~v~m~GDG~ND~~ALk~Ad-VGIAl~~~~~~~~~ 836 (853)
| ..|+.+||+.||.+||+.|+ .||||+|+.+..++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~ 229 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQ 229 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHH
Confidence 4 36899999999999999999 69999999987654
No 83
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.98 E-value=0.0032 Score=64.64 Aligned_cols=42 Identities=17% Similarity=0.251 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++||.+...+..+-+..|+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 478899999999999999999999999999999989999885
No 84
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=96.88 E-value=0.0061 Score=65.44 Aligned_cols=157 Identities=13% Similarity=0.109 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHhh-CCCcEEEEcCCChhhHHHHHHHcCcC---CCCeEEEccCCCCceeEeecCCcccccccch---h
Q 003049 674 PIREDSAKILSELKN-SSQDLAMITGDQALTACYVASQVHIV---TKPVLILCPVKNGKVYEWVSPDETEKIQYSE---K 746 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~-agi~v~miTGDn~~TA~~VA~~~gI~---~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~---~ 746 (853)
.+-++++++|+.|++ .|+.++++||.....+..+.+.+++. .+...+.+..+ .+.+...+......+-. .
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~---~~~~~~l~~~~~~~i~~~l~~ 112 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDING---KTHIVHLPDAIARDISVQLHT 112 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCC---CeeeccCChhHHHHHHHHHHH
Confidence 455789999999998 79999999999999999888877642 11222221110 11111111110000000 0
Q ss_pred hh------ccccCceeEEEehhhh----HHhhc-chhHHhhcc-----cceEEEeeChh--hHHHHHHHHHH-cC---CE
Q 003049 747 EV------EGLTDAHDLCIGGDCF----EMLQQ-TSAVLRVIP-----YVKVFARVAPE--QKELILTTFKA-VG---RM 804 (853)
Q Consensus 747 ~~------~~~~~~~~l~itG~~l----~~l~~-~~~~~~~~~-----~~~VfAr~sP~--qK~~iV~~Lq~-~g---~~ 804 (853)
.. .-..+...++...... +.+.. ...+.+... ...-+-.+.|. .|..-|+.+.+ .| ..
T Consensus 113 ~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~ 192 (266)
T PRK10187 113 ALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRT 192 (266)
T ss_pred HhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCe
Confidence 00 0001112223222111 00000 011111111 11233344554 89888887654 43 56
Q ss_pred EEEEcCCcccHHHHHhC----CceEEeccCCCc
Q 003049 805 TLMCGDGTNDVGALKQA----HVGVALLNAVPP 833 (853)
Q Consensus 805 v~m~GDG~ND~~ALk~A----dVGIAl~~~~~~ 833 (853)
++++||+.||.+|++.+ ..||+|+++.+.
T Consensus 193 v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~~ 225 (266)
T PRK10187 193 PVFVGDDLTDEAGFAVVNRLGGISVKVGTGATQ 225 (266)
T ss_pred EEEEcCCccHHHHHHHHHhcCCeEEEECCCCCc
Confidence 88999999999999999 999999987654
No 85
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.84 E-value=0.01 Score=63.46 Aligned_cols=43 Identities=12% Similarity=0.060 Sum_probs=38.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
+..-+.++++|++|++.||.+++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
No 86
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.83 E-value=0.0048 Score=66.50 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=38.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++||-+...+..+.++.|+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 478999999999999999999999999999899898888875
No 87
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.77 E-value=0.024 Score=58.02 Aligned_cols=39 Identities=13% Similarity=0.260 Sum_probs=35.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~g 712 (853)
++-+++.++|++|++.|++++++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999998854
No 88
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.60 E-value=0.0044 Score=63.21 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=38.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+++.+.+.++++.|++.|+++.++||-....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 3456777899999999999999999999999999999999986
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.59 E-value=0.0062 Score=62.73 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=39.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.++++.|++.|+++.++|+-+...+..+.+..|+.
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 368999999999999999999999999999999999999986
No 90
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.57 E-value=0.0063 Score=63.36 Aligned_cols=98 Identities=14% Similarity=0.122 Sum_probs=70.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|++.|+++.++||........+.+..||..--
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----------------------------------- 135 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF----------------------------------- 135 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----------------------------------
Confidence 578899999999999999999999999999999999999986321
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
+..++++.. ....|+- .-+...+++.| ..++|+||..||+.|-+.|++.....
T Consensus 136 ---~~~~~~~~~-------------------~~~Kp~~-~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v 191 (222)
T PRK10826 136 ---DALASAEKL-------------------PYSKPHP-EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVV 191 (222)
T ss_pred ---cEEEEcccC-------------------CCCCCCH-HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence 111111100 0112222 13444555555 34899999999999999999876554
No 91
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.44 E-value=0.0095 Score=61.59 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=38.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++.++++.|++.|+++.++||.....+..+-+..|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 478999999999999999999999999999999999999863
No 92
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.39 E-value=0.0092 Score=62.52 Aligned_cols=42 Identities=12% Similarity=0.130 Sum_probs=37.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 367999999999999999999999999998888888888875
No 93
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.32 E-value=0.011 Score=62.07 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCC----ChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGD----n~~TA~~VA~~~gI~ 714 (853)
..+.+++++.+++|++.|+++.++||. ...|+..+.+..||.
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 457888999999999999999999995 466999999999994
No 94
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.31 E-value=0.019 Score=61.26 Aligned_cols=45 Identities=9% Similarity=0.095 Sum_probs=41.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP 717 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~ 717 (853)
-++||++.+.++.|++.|+++.++||-....+..+.++.|+....
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 578999999999999999999999999999999999999986443
No 95
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.30 E-value=0.022 Score=58.78 Aligned_cols=105 Identities=19% Similarity=0.053 Sum_probs=72.5
Q ss_pred CCCcchHHHHH-HHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 674 PIREDSAKILS-ELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 674 ~lr~~a~~~I~-~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..++......+-+. ++-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~------le~-------------------- 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQ------IER-------------------- 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEE------eEE--------------------
Confidence 46999999996 889999999999999999999999997765321111100 000
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEE-EeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF-ARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf-Ar~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
-.| .++- ..+.-++|..-++..-. .....-+=||..||.|+|+.||-.+++.
T Consensus 148 ------~~g------------------g~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 148 ------GNG------------------GWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ------eCC------------------ceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 000 0110 12566788887764422 2233457799999999999999999984
No 96
>PRK11590 hypothetical protein; Provisional
Probab=96.16 E-value=0.044 Score=56.66 Aligned_cols=105 Identities=19% Similarity=0.054 Sum_probs=73.2
Q ss_pred CCCcchHHHH-HHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 674 PIREDSAKIL-SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 674 ~lr~~a~~~I-~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
++.|++.+.| +.|++.|++++++|+-....+..+++.+|+.....++-+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~----------------------------- 145 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQ----------------------------- 145 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEE-----------------------------
Confidence 4589999999 5788899999999999999999999999973211111000
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEE-EeeChhhHHHHHHHH-HHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF-ARVAPEQKELILTTF-KAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf-Ar~sP~qK~~iV~~L-q~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
-....||. +. ..+.-++|..-++.. .......-+=||..||.|+|+.|+-.+++.
T Consensus 146 --l~~~~tg~-------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 146 --MQRRYGGW-------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred --EEEEEccE-------------------ECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 01122232 11 126678888877654 222233446799999999999999999985
No 97
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.10 E-value=0.016 Score=60.83 Aligned_cols=41 Identities=15% Similarity=0.248 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCC----ChhhHHHHHHHcCcCC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIVT 715 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGD----n~~TA~~VA~~~gI~~ 715 (853)
+++.+++.+++|++.|+++.++|+- ...++..+.+.+||..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 4455999999999999999999997 6679999999999963
No 98
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.98 E-value=0.025 Score=60.96 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=38.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++-|++.++++.|++.|+++.++|+.+...+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999999986
No 99
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.95 E-value=0.025 Score=55.36 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=68.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
.++|+-++.++-+++.+++++++|+--.--...+-..++=-. ...-.+...+.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke-~i~~idi~sn~-------------------------- 125 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE-RIYCIDIVSNN-------------------------- 125 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc-ceeeeEEeecC--------------------------
Confidence 579999999999999999999998766555555555443100 00000000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcc-cceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEE
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIP-YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~-~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
..+-..|. ..++. .-..| -.+|...|..|++....+.|||||+.|..|-|.+|+=.|
T Consensus 126 -~~ih~dg~-----------h~i~~~~ds~f----G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 126 -DYIHIDGQ-----------HSIKYTDDSQF----GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred -ceEcCCCc-----------eeeecCCcccc----CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 00000000 00000 00122 247899999999999999999999999999999987554
No 100
>PTZ00174 phosphomannomutase; Provisional
Probab=95.90 E-value=0.038 Score=58.63 Aligned_cols=46 Identities=20% Similarity=0.217 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHcCCEEEEEcC----CcccHHHHHhC-CceEEeccCCCcC
Q 003049 789 EQKELILTTFKAVGRMTLMCGD----GTNDVGALKQA-HVGVALLNAVPPT 834 (853)
Q Consensus 789 ~qK~~iV~~Lq~~g~~v~m~GD----G~ND~~ALk~A-dVGIAl~~~~~~~ 834 (853)
-.|..-|+.|.+.-.-|+.+|| |-||.+||+.| -.|+++.++++..
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~ 237 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTI 237 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHH
Confidence 4799999999887778999999 99999999987 7889988777653
No 101
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.69 E-value=0.029 Score=59.56 Aligned_cols=42 Identities=12% Similarity=0.014 Sum_probs=39.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++.++++.|++.|+++.++|+-+...+..+-+..||..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 578999999999999999999999999999999999999863
No 102
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.68 E-value=0.035 Score=56.58 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=37.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 67899999999999999999999999888888888899975
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.67 E-value=0.04 Score=58.57 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++||.....+..+-++.|+..--
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f------------------------------------ 142 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR------------------------------------ 142 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC------------------------------------
Confidence 56899999999999999999999999999999999999886320
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCC----EEEEEcCCcccHHHHHhCCce
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR----MTLMCGDGTNDVGALKQAHVG 824 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~----~v~m~GDG~ND~~ALk~AdVG 824 (853)
.+.+++++. + .+..| +...+...+++.|. .++|+||..+|+-|-+.|.+-
T Consensus 143 -~d~ii~~~~------------------~-~~~KP-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 143 -PDYNVTTDD------------------V-PAGRP-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -CceEEcccc------------------C-CCCCC-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 011122211 1 11234 23445555666553 389999999999999999963
No 104
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.62 E-value=0.046 Score=59.66 Aligned_cols=109 Identities=12% Similarity=-0.024 Sum_probs=75.4
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
...+++.+++.++|++|++.|++++++||....++..+.+.+|+..... +
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f---~--------------------------- 232 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF---D--------------------------- 232 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch---h---------------------------
Confidence 3678899999999999999999999999999999999999998863100 0
Q ss_pred cccCceeEEEehhhhH-HhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhCCceEE
Q 003049 750 GLTDAHDLCIGGDCFE-MLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~-~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
..+..+... +|.+ .. --+-.|+-+...++.+-. .-..++|+||..+|+-|-+.|.+-.-
T Consensus 233 -------~i~~~~~~~~~~~~----------~~-~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 233 -------DLIGRPPDMHFQRE----------QG-DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred -------hhhCCcchhhhccc----------CC-CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 000000000 0000 00 014456677777776533 22568999999999999999998643
No 105
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.62 E-value=0.061 Score=66.24 Aligned_cols=187 Identities=19% Similarity=0.212 Sum_probs=99.9
Q ss_pred hHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEee--ecCCCCcchHHHHHHHhh-CCCcEEEE
Q 003049 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAV--FNCPIREDSAKILSELKN-SSQDLAMI 696 (853)
Q Consensus 620 ~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~--~~d~lr~~a~~~I~~L~~-agi~v~mi 696 (853)
+.+.....|.+.-.|.+++-| |.|++.... -...+-+++.++|++|.+ .|+.|+++
T Consensus 479 ~~~~~~~~y~~~~~rLi~~D~---------------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~iv 537 (726)
T PRK14501 479 AAEEIIARYRAASRRLLLLDY---------------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAII 537 (726)
T ss_pred CHHHHHHHHHhccceEEEEec---------------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEE
Confidence 455666777777778888865 445554311 112356799999999999 69999999
Q ss_pred cCCChhhHHHHHHHcCcC---CCCeEEEccCCCCceeEeecCCc-cc--ccccch--hh-hc----cc--cCceeEEEe-
Q 003049 697 TGDQALTACYVASQVHIV---TKPVLILCPVKNGKVYEWVSPDE-TE--KIQYSE--KE-VE----GL--TDAHDLCIG- 760 (853)
Q Consensus 697 TGDn~~TA~~VA~~~gI~---~~~~~il~~~~~~~~~~~~~~~~-~~--~~~~~~--~~-~~----~~--~~~~~l~it- 760 (853)
||.............++. .+...+... +-.|..... .. .-.... .. .. .. .+...+...
T Consensus 538 SGR~~~~l~~~~~~~~l~liaenG~~i~~~-----~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~ 612 (726)
T PRK14501 538 SGRDRDTLERWFGDLPIHLVAEHGAWSRAP-----GGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHY 612 (726)
T ss_pred eCCCHHHHHHHhCCCCeEEEEeCCEEEeCC-----CCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEc
Confidence 999999888776655431 112222110 112322111 00 000000 00 00 00 011122221
Q ss_pred -h--hhhHHhhcc---hhHHhhcc--cceEE-----EeeCh--hhHHHHHHHHHHcC--CEEEEEcCCcccHHHHHhC--
Q 003049 761 -G--DCFEMLQQT---SAVLRVIP--YVKVF-----ARVAP--EQKELILTTFKAVG--RMTLMCGDGTNDVGALKQA-- 821 (853)
Q Consensus 761 -G--~~l~~l~~~---~~~~~~~~--~~~Vf-----Ar~sP--~qK~~iV~~Lq~~g--~~v~m~GDG~ND~~ALk~A-- 821 (853)
. ..+...... ..+...+. .+.+. -.+.| -.|...++.+.+.. ..++++||+.||.+|++.+
T Consensus 613 r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~ 692 (726)
T PRK14501 613 RNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPE 692 (726)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhccc
Confidence 0 111111100 11222221 11221 13334 57999999988732 4699999999999999997
Q ss_pred -CceEEeccCCC
Q 003049 822 -HVGVALLNAVP 832 (853)
Q Consensus 822 -dVGIAl~~~~~ 832 (853)
..||+|+++.+
T Consensus 693 ~~~~v~vG~~~s 704 (726)
T PRK14501 693 TAITVKVGPGES 704 (726)
T ss_pred CceEEEECCCCC
Confidence 58888887544
No 106
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=95.59 E-value=0.044 Score=56.77 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.||+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 478999999999999999999999999999999999999875
No 107
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.54 E-value=0.026 Score=56.65 Aligned_cols=40 Identities=15% Similarity=0.300 Sum_probs=32.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++|+.|+++|+++.++|+... +..+.+.+|+.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 46789999999999999999999997432 45567777764
No 108
>PRK11587 putative phosphatase; Provisional
Probab=95.45 E-value=0.09 Score=54.52 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++|+.+...+...-+..|+...
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------------------------------------- 125 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------------------------------------- 125 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-------------------------------------
Confidence 5789999999999999999999999887666655556665211
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCce-EEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVG-VALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVG-IAl~~ 829 (853)
+.+++++.. .+..|+ -.-+...+++.| ..++|+||..+|+.|-++|++- |++..
T Consensus 126 --~~i~~~~~~-------------------~~~KP~-p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 126 --EVFVTAERV-------------------KRGKPE-PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred --cEEEEHHHh-------------------cCCCCC-cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 112233211 112332 223333444444 5689999999999999999984 55544
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
+
T Consensus 184 ~ 184 (218)
T PRK11587 184 P 184 (218)
T ss_pred C
Confidence 3
No 109
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.43 E-value=0.093 Score=52.25 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=34.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC-hhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn-~~TA~~VA~~~gI~ 714 (853)
.+-|++.++++.|++.|+++.++|+-+ ...+..+++.+|+.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 567899999999999999999999987 56677777777763
No 110
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=95.43 E-value=0.05 Score=58.13 Aligned_cols=42 Identities=14% Similarity=0.109 Sum_probs=38.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 568999999999999999999999999999999999999863
No 111
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.28 E-value=0.054 Score=51.27 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=36.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCC--------hhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQ--------ALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn--------~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 4678999999999999999999999988 66777788888774
No 112
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.10 E-value=0.071 Score=57.22 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 367899999999999999999999999998888887777765
No 113
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.07 E-value=0.067 Score=55.85 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=37.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.+.++.|++.|+++.++|.-+...+...-+..|+.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 467899999999999999999999998888888877778875
No 114
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=94.97 E-value=0.075 Score=61.80 Aligned_cols=43 Identities=7% Similarity=0.067 Sum_probs=39.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
-++.|++.+.++.|++.|+++.++|+-....+..+.+.+|+..
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 3789999999999999999999999999999999999999863
No 115
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.97 E-value=0.056 Score=62.13 Aligned_cols=172 Identities=16% Similarity=0.175 Sum_probs=104.7
Q ss_pred hhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-CeEEEccCCCCce--------
Q 003049 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-PVLILCPVKNGKV-------- 729 (853)
Q Consensus 659 ~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-~~~il~~~~~~~~-------- 729 (853)
.-++-.|.|++..+.+.++|....|+.|-++-||.+-.+-.+.+..+-.|.++||-.. +.-|.-..+++..
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~ 890 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAH 890 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCC
Confidence 3367799999999999999999999999999999999999999999999999999743 2322211111100
Q ss_pred -----------eEeecC--CcccccccchhhhccccCceeEEEehhhhHHhhcchh-----------------HHhhccc
Q 003049 730 -----------YEWVSP--DETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA-----------------VLRVIPY 779 (853)
Q Consensus 730 -----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~-----------------~~~~~~~ 779 (853)
-.|..+ ++.+..-.+... .-...-.+--+..+...+.+.+. +.+.=.-
T Consensus 891 ~q~a~qkpSlhddlnqia~ddaeg~lL~~Ee--g~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLL 968 (1354)
T KOG4383|consen 891 EQFAAQKPSLHDDLNQIALDDAEGELLDCEE--GARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLL 968 (1354)
T ss_pred hhhhccCcchhHHHHHhhhcccccceeehhh--cccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCccee
Confidence 001000 000000000000 00000000000001111111111 1111112
Q ss_pred ceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccH--HHHHhCCceEEeccCCC
Q 003049 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDV--GALKQAHVGVALLNAVP 832 (853)
Q Consensus 780 ~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~--~ALk~AdVGIAl~~~~~ 832 (853)
+-.|..++|+--.+.|+.+|+.|.+|+..|.-.|-. --.-+||++||+..-.+
T Consensus 969 V~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~ 1023 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEE 1023 (1354)
T ss_pred eeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCC
Confidence 357999999999999999999999999999988733 34468999999975443
No 116
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.96 E-value=0.18 Score=49.55 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=31.1
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
++.+.++++++++++++.|++++.+||.....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4677899999999999999999999999988875
No 117
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.89 E-value=0.09 Score=52.46 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=42.4
Q ss_pred eeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCC-ChhhHHHHHHHcCcC
Q 003049 665 FAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD-QALTACYVASQVHIV 714 (853)
Q Consensus 665 f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGD-n~~TA~~VA~~~gI~ 714 (853)
......-+-++.|++.++++.|++.|+++.++|+- ...++..+-..+|+.
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 44455556678999999999999999999999965 888999998888874
No 118
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=94.86 E-value=0.069 Score=55.27 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=37.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++.|+++.++|+=+...+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 68999999999999999999999998888888888888875
No 119
>PLN02580 trehalose-phosphatase
Probab=94.68 E-value=0.42 Score=53.58 Aligned_cols=52 Identities=19% Similarity=0.292 Sum_probs=39.8
Q ss_pred EEeeChh---hHHHHHHHHHH-cC-----C-EEEEEcCCcccHHHHHh-----CCceEEeccCCCcC
Q 003049 783 FARVAPE---QKELILTTFKA-VG-----R-MTLMCGDGTNDVGALKQ-----AHVGVALLNAVPPT 834 (853)
Q Consensus 783 fAr~sP~---qK~~iV~~Lq~-~g-----~-~v~m~GDG~ND~~ALk~-----AdVGIAl~~~~~~~ 834 (853)
+-.+.|. +|..-|+.|-+ .| . .++++||+.||-.|++. +++||+|+++.+..
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t 357 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES 357 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc
Confidence 4466774 89988887765 33 1 25799999999999996 68999999876543
No 120
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=94.61 E-value=0.05 Score=53.39 Aligned_cols=42 Identities=12% Similarity=0.099 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.+.+++|++.|++++++|+-+......+.+++|+.
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 467899999999999999999999999999999999999987
No 121
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.60 E-value=0.14 Score=57.31 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
.++.|++.+.++.|++.|+++.++|+-+...+..+-+..||..
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 3578999999999999999999999999999999999999863
No 122
>PRK06769 hypothetical protein; Validated
Probab=94.55 E-value=0.13 Score=51.34 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=25.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQA 701 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~ 701 (853)
++.|++++++++|++.|+++.++|+...
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4789999999999999999999998764
No 123
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.43 E-value=0.16 Score=50.68 Aligned_cols=41 Identities=12% Similarity=0.176 Sum_probs=34.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.++++.|++.|+++.++|+-.... ..+..++|+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 3688999999999999999999999988777 5555557775
No 124
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.15 E-value=0.1 Score=52.20 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=34.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++|+- ..+..+-+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 478999999999999999999999986 5567777788875
No 125
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.05 E-value=0.24 Score=53.73 Aligned_cols=38 Identities=11% Similarity=0.267 Sum_probs=33.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
++.|++.+.++.|++.|+++.++|+-+......+-+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 67899999999999999999999998887777665554
No 126
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.78 E-value=0.27 Score=47.61 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=32.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCh---------------hhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~---------------~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5789999999999999999999998762 2345566677764
No 127
>PLN02940 riboflavin kinase
Probab=93.60 E-value=0.21 Score=56.63 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=65.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHH-HcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS-QVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~-~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
-++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+...
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~----------------------------------- 136 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES----------------------------------- 136 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----------------------------------
Confidence 3568999999999999999999999998888776654 5676421
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCceEE
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
.+.+++++.. .+..|+ ...+.+.+++.| ..++|+||..+|+.|-++|++...
T Consensus 137 ---Fd~ii~~d~v-------------------~~~KP~-p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 137 ---FSVIVGGDEV-------------------EKGKPS-PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred ---CCEEEehhhc-------------------CCCCCC-HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 1222332211 122332 223334444443 558999999999999999998643
No 128
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.56 E-value=0.24 Score=49.67 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=25.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQ 700 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn 700 (853)
.+.|++.+++++|++.|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999876
No 129
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.10 E-value=0.39 Score=50.23 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=71.6
Q ss_pred CCCCcchHHHHHHH--hhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 673 CPIREDSAKILSEL--KNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 673 d~lr~~a~~~I~~L--~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
=|+-|+.+++++.| ++.|+.++++|.-|..--.++-+.-|+...-..|.+.+ ..|..
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNp-----a~~~~---------------- 128 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNP-----ACFDA---------------- 128 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCC-----ceecC----------------
Confidence 37889999999999 56899999999999999999999999863211122211 00000
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChh-hHHHHHHHHHHc----C---CEEEEEcCCccc-HHHHH--
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE-QKELILTTFKAV----G---RMTLMCGDGTND-VGALK-- 819 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~-qK~~iV~~Lq~~----g---~~v~m~GDG~ND-~~ALk-- 819 (853)
+..+.+.-. +.+-+.++.|. =|..+++.+++. | ..|.++|||.|| ||+++
T Consensus 129 ---~G~l~v~py----------------h~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 129 ---DGRLRVRPY----------------HSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred ---CceEEEeCc----------------cCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 001111100 00113355553 699999988875 4 689999999999 45554
Q ss_pred hCCc
Q 003049 820 QAHV 823 (853)
Q Consensus 820 ~AdV 823 (853)
.+|+
T Consensus 190 ~~D~ 193 (234)
T PF06888_consen 190 PRDV 193 (234)
T ss_pred CCCE
Confidence 4555
No 130
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=92.93 E-value=1.1 Score=55.99 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=48.2
Q ss_pred HHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHH-hhCCCcEEEEcCC
Q 003049 621 YIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSEL-KNSSQDLAMITGD 699 (853)
Q Consensus 621 ~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L-~~agi~v~miTGD 699 (853)
.++....|.+...|.+++-| |.|++-.-...-.+-+++.+++++| ++.|+.|+++||.
T Consensus 584 ~~~i~~~y~~~~~rlI~LDy---------------------DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR 642 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLDY---------------------DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSAR 642 (854)
T ss_pred HHHHHHHHHhhcCeEEEEec---------------------CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCC
Confidence 34455666666677777655 4444433222335567899999997 7789999999999
Q ss_pred ChhhHHHHHHH
Q 003049 700 QALTACYVASQ 710 (853)
Q Consensus 700 n~~TA~~VA~~ 710 (853)
...+....-..
T Consensus 643 ~~~~L~~~f~~ 653 (854)
T PLN02205 643 SRKTLADWFSP 653 (854)
T ss_pred CHHHHHHHhCC
Confidence 99998877644
No 131
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=92.92 E-value=0.17 Score=49.10 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=33.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
+..+++.+.++.|++.|+++.++|+-+...+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34579999999999999999999999999888887775
No 132
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.86 E-value=0.34 Score=53.97 Aligned_cols=26 Identities=19% Similarity=0.267 Sum_probs=24.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITG 698 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTG 698 (853)
.++.|++.+++++|++.|+++.++|.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 57899999999999999999999998
No 133
>PRK09449 dUMP phosphatase; Provisional
Probab=92.84 E-value=0.48 Score=49.10 Aligned_cols=41 Identities=12% Similarity=0.194 Sum_probs=35.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|+ .|+++.++|......+...-+..|+.
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 357899999999999 68999999998888888777888875
No 134
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=92.50 E-value=0.74 Score=47.51 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=37.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++. +++.++|+-....+..+.+++|+.
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 46789999999999999 999999999888888888888885
No 135
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.35 E-value=0.36 Score=49.20 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=32.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++-|++.++++.|++.|+++.++|+-.. .+..+.+.+|+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~ 144 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLL 144 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcH
Confidence 5789999999999999999999997554 346667777774
No 136
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.27 E-value=0.65 Score=47.16 Aligned_cols=42 Identities=10% Similarity=0.169 Sum_probs=38.0
Q ss_pred CCCCcchHHHHHHHhhCCC-cEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQ-DLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi-~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
=|+-|+..++|+.+++.|. .++++|--|..--..+-+..||.
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 3778999999999999998 99999999999888888888885
No 137
>PLN02811 hydrolase
Probab=92.11 E-value=0.42 Score=49.57 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=28.3
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA 704 (853)
..++.|++.+.|+.|++.|+++.++||-+....
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 346789999999999999999999999776543
No 138
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=91.91 E-value=0.41 Score=49.79 Aligned_cols=42 Identities=10% Similarity=0.052 Sum_probs=34.8
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
.++.++.||+.+++++|+++|+++.++|..+......+-+..
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 345689999999999999999999999998877666655544
No 139
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.90 E-value=0.18 Score=48.87 Aligned_cols=44 Identities=14% Similarity=0.026 Sum_probs=38.8
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+.-++||++.+.++.|+ .++++.++|.=+...+..+-+.+|+.
T Consensus 41 ~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 41 GVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345578999999999999 57999999999999999999988874
No 140
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.57 E-value=0.8 Score=48.95 Aligned_cols=43 Identities=2% Similarity=-0.038 Sum_probs=33.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH---HHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTA---CYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA---~~VA~~~gI~ 714 (853)
..++-|++.+.++.|++.|+++.++|+-..... ...-+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 456789999999999999999999999764433 3445567775
No 141
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=90.08 E-value=2 Score=44.79 Aligned_cols=43 Identities=7% Similarity=0.074 Sum_probs=33.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH---HHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTAC---YVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~---~VA~~~gI~ 714 (853)
+.|.-|++.++++.|++.|++|+++||....... .--++.|+.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3588899999999999999999999999975522 222345654
No 142
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=89.89 E-value=1.1 Score=45.57 Aligned_cols=143 Identities=20% Similarity=0.215 Sum_probs=77.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc-cc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG-LT 752 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 752 (853)
++-|++.++++.|++. ...+++|---..-+..+|+.+|+......-- .+ +.|. ++.......+ +.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~T-------e~---~lD~---~~~PeeeR~E~L~ 148 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGT-------EV---DLDS---IAVPEEEREELLS 148 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccc-------cc---cCcc---ccCChHHHHHHHH
Confidence 5679999999999865 5667777778888999999999964321100 00 0000 0111111101 11
Q ss_pred Cce-eEEEehhhh-HHhhc---c---hhHHhhcccceEEEeeChhhHHHHHHHHHH---cCCEEEEEcCCcccHHHHHhC
Q 003049 753 DAH-DLCIGGDCF-EMLQQ---T---SAVLRVIPYVKVFARVAPEQKELILTTFKA---VGRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 753 ~~~-~l~itG~~l-~~l~~---~---~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~---~g~~v~m~GDG~ND~~ALk~A 821 (853)
.-+ .-.++|+.+ +.+.+ + .+..+++..+++... ..|.++++.+-+ .....+.+||.+.|+.+|+.+
T Consensus 149 ~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~ 225 (315)
T COG4030 149 IIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAA 225 (315)
T ss_pred hcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHh
Confidence 111 224566643 22221 1 233444444444333 345556555444 234456779999999999988
Q ss_pred C-c-eEEec-cCCCc
Q 003049 822 H-V-GVALL-NAVPP 833 (853)
Q Consensus 822 d-V-GIAl~-~~~~~ 833 (853)
. - |+|+. ||.+-
T Consensus 226 rgrGglAvaFNGNeY 240 (315)
T COG4030 226 RGRGGLAVAFNGNEY 240 (315)
T ss_pred hccCceEEEecCCcc
Confidence 6 2 36655 66544
No 143
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=89.86 E-value=1.3 Score=46.75 Aligned_cols=48 Identities=6% Similarity=0.046 Sum_probs=36.7
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH--HHHHHcCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC--YVASQVHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~--~VA~~~gI~ 714 (853)
|.+.-...+-|++.+++++|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 445556778999999999999999999999995443333 455777775
No 144
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=89.83 E-value=1.1 Score=43.62 Aligned_cols=67 Identities=13% Similarity=0.212 Sum_probs=50.6
Q ss_pred HHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH
Q 003049 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (853)
Q Consensus 625 ~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA 704 (853)
.+.+.++|.|-+.+-. ++ +++..= ....-|+.++-+.+++++|++++++|--++..+
T Consensus 20 ~~~L~~~Gikgvi~Dl---DN------------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV 76 (175)
T COG2179 20 PDILKAHGIKGVILDL---DN------------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRV 76 (175)
T ss_pred HHHHHHcCCcEEEEec---cC------------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHH
Confidence 4677889999887632 21 222111 123567888999999999999999999999999
Q ss_pred HHHHHHcCcC
Q 003049 705 CYVASQVHIV 714 (853)
Q Consensus 705 ~~VA~~~gI~ 714 (853)
..+|+.+|+.
T Consensus 77 ~~~~~~l~v~ 86 (175)
T COG2179 77 ARAAEKLGVP 86 (175)
T ss_pred HhhhhhcCCc
Confidence 9999999985
No 145
>PHA02597 30.2 hypothetical protein; Provisional
Probab=89.41 E-value=1.3 Score=44.87 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=28.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++.+ +.+++|.-+..+....-+.+|+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~ 113 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLN 113 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHH
Confidence 47899999999999875 56677765544444455566653
No 146
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=89.34 E-value=0.29 Score=51.91 Aligned_cols=45 Identities=31% Similarity=0.409 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHc-C---CEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 789 EQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 789 ~qK~~iV~~Lq~~-g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
..|...|+.|++. | ..|+.|||..||.+||..++-||.++|+.++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4699999988863 3 3578899999999999999999999998887
No 147
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=89.10 E-value=1.4 Score=43.65 Aligned_cols=39 Identities=10% Similarity=0.193 Sum_probs=30.5
Q ss_pred CcchHHHHHHHhhCCCcEEEEcCCChh------------hHHHHHHHcCcC
Q 003049 676 REDSAKILSELKNSSQDLAMITGDQAL------------TACYVASQVHIV 714 (853)
Q Consensus 676 r~~a~~~I~~L~~agi~v~miTGDn~~------------TA~~VA~~~gI~ 714 (853)
-|++.++++.|++.|+++.++|.-... .+..+.+.+|+.
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999965432 345566777763
No 148
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=89.08 E-value=1.1 Score=44.30 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=23.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGD 699 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGD 699 (853)
++-|++.+++++|++.|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999999999974
No 149
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=88.19 E-value=2.1 Score=42.76 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=24.5
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCh
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQA 701 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~ 701 (853)
+.|++.++|+.|+++|+++.++|.=+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999997663
No 150
>PLN02645 phosphoglycolate phosphatase
Probab=87.89 E-value=1.8 Score=47.53 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=40.2
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH---HHcCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVA---SQVHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA---~~~gI~ 714 (853)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556667799999999999999999999999988888887 456664
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=87.30 E-value=0.92 Score=46.54 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=27.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhh
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALT 703 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~T 703 (853)
.-++.|++.++++.|++.|+++.++|......
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~ 123 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTD 123 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 34678999999999999999999999876543
No 152
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=86.52 E-value=5.8 Score=40.48 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=34.3
Q ss_pred chHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 678 DSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 678 ~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
.+.+.+.+|+++|++|+.+|--....-...-+.+|.-.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 58899999999999999999998888888899999863
No 153
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=86.51 E-value=2.1 Score=40.33 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC-ChhhHHHHHHHcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGD-QALTACYVASQVH 712 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGD-n~~TA~~VA~~~g 712 (853)
++.+++.+.++.|++.|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6776666666666
No 154
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=85.70 E-value=1.6 Score=44.41 Aligned_cols=32 Identities=13% Similarity=0.385 Sum_probs=27.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
++.|++.++++.|++.|+++.++|.-+.....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~ 115 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT 115 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHH
Confidence 57899999999999999999999997765443
No 155
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=85.67 E-value=2.1 Score=44.17 Aligned_cols=39 Identities=3% Similarity=0.071 Sum_probs=32.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.| ++++.++|+.....+..+=+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 45678999999999 4899999999887777777777775
No 156
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=85.65 E-value=3.5 Score=40.86 Aligned_cols=43 Identities=19% Similarity=0.184 Sum_probs=36.9
Q ss_pred cCCCCcchHHHHHHHhhCCC--cEEEEcCC-------ChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQ--DLAMITGD-------QALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi--~v~miTGD-------n~~TA~~VA~~~gI~ 714 (853)
++.+-|+..+.+++|++.+. +++++|-- +...|.++++.+||.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 46678899999999999886 59999986 478899999999975
No 157
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=84.74 E-value=2.6 Score=42.22 Aligned_cols=38 Identities=11% Similarity=0.117 Sum_probs=32.3
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+-| ..++++.|++. ++..++||.....+..+-+..|+.
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 445 46899999875 899999999999999999999986
No 158
>PLN03017 trehalose-phosphatase
Probab=84.19 E-value=16 Score=40.81 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=36.6
Q ss_pred CcceeeEeeecC--CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH
Q 003049 662 GLTFAGFAVFNC--PIREDSAKILSELKNSSQDLAMITGDQALTACYVA 708 (853)
Q Consensus 662 dl~f~G~l~~~d--~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA 708 (853)
|.|++-+.--.+ .+-+++.++|++|. .+++++++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 566665554333 36789999999999 77999999999999988873
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.19 E-value=2.2 Score=42.70 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=33.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.+++.+++++|+ .++.++|.-+...+..+.+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46789999999998 479999999888899999999985
No 160
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=84.18 E-value=2.9 Score=53.69 Aligned_cols=41 Identities=7% Similarity=0.050 Sum_probs=37.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+-|++.+.+++|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 35799999999999999999999999999988888888884
No 161
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=83.15 E-value=2.1 Score=45.27 Aligned_cols=49 Identities=16% Similarity=0.064 Sum_probs=36.5
Q ss_pred EEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhC--------CceEEeccC
Q 003049 782 VFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQA--------HVGVALLNA 830 (853)
Q Consensus 782 VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~A--------dVGIAl~~~ 830 (853)
+-.+-.+-+|...++.+.+ .+ ..++|+||+.||..|++.+ ..||+++.+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g 219 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG 219 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC
Confidence 3444556688888877654 33 4689999999999999999 478888533
No 162
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=82.42 E-value=3.9 Score=45.13 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=36.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH----cCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ----VHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~----~gI~ 714 (853)
++.+++.++|+.|++.|+.+.++|.-+...|..+-++ +|+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~ 75 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA 75 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH
Confidence 4578999999999999999999999999999998887 6654
No 163
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=78.90 E-value=1.6 Score=39.35 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=37.1
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH---HHcCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVA---SQVHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA---~~~gI~ 714 (853)
|.+...+.+=|++.++|+.|++.|.+++++|-....+...++ +.+||.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667888899999999999999999999999888766666 445654
No 164
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=70.90 E-value=19 Score=36.19 Aligned_cols=37 Identities=22% Similarity=0.392 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 791 KELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 791 K~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
...+.+.+++.+ ....|+||-..|..|-..|+++ .+.
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~~ 147 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GVL 147 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ceE
Confidence 345666777765 5678999999999999998887 543
No 165
>PRK10444 UMP phosphatase; Provisional
Probab=70.03 E-value=5.3 Score=42.33 Aligned_cols=48 Identities=15% Similarity=0.181 Sum_probs=42.2
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc---CcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV---HIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~---gI~ 714 (853)
|.+.-.+.+=|++.++|+.|++.|++++++||....+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 666667788899999999999999999999999999998888875 663
No 166
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=69.03 E-value=6.7 Score=41.78 Aligned_cols=48 Identities=10% Similarity=0.092 Sum_probs=37.9
Q ss_pred eEeeecCC----CCcchHHHHHHHhhCCCcEEEEcCCChhh---HHHHHHHcCcC
Q 003049 667 GFAVFNCP----IREDSAKILSELKNSSQDLAMITGDQALT---ACYVASQVHIV 714 (853)
Q Consensus 667 G~l~~~d~----lr~~a~~~I~~L~~agi~v~miTGDn~~T---A~~VA~~~gI~ 714 (853)
|.+.-.+. +=|++.++|++|++.|++++++||.+..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 77899999999999999999999988877 44445567875
No 167
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=68.94 E-value=9.6 Score=39.97 Aligned_cols=29 Identities=21% Similarity=0.246 Sum_probs=23.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChh
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQAL 702 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~ 702 (853)
-++-||+.++++.|++. +++.++|.-+..
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 35678999999999975 899999986653
No 168
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=67.90 E-value=26 Score=37.72 Aligned_cols=48 Identities=8% Similarity=0.156 Sum_probs=35.8
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHH---HHHcCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYV---ASQVHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~V---A~~~gI~ 714 (853)
|.+.-.+.+=|++.++|++|++.|++++.+||....+...+ -+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44444566678899999999999999999999776555443 3556764
No 169
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=67.59 E-value=7.6 Score=41.89 Aligned_cols=41 Identities=20% Similarity=0.109 Sum_probs=38.4
Q ss_pred CC-cchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 675 IR-EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 675 lr-~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
+| |++.+++++|++.|+++.++|+-+...+.++-+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999999999999999999975
No 170
>PLN02151 trehalose-phosphatase
Probab=66.74 E-value=71 Score=35.68 Aligned_cols=47 Identities=9% Similarity=-0.009 Sum_probs=33.3
Q ss_pred CcceeeEeeecC--CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHH
Q 003049 662 GLTFAGFAVFNC--PIREDSAKILSELKNSSQDLAMITGDQALTACYVAS 709 (853)
Q Consensus 662 dl~f~G~l~~~d--~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~ 709 (853)
|.|++-+.---+ .+-++++++|+.|. .+..+.++||.+......+..
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 445554332222 25578999999999 457999999999988777653
No 171
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=66.72 E-value=8.1 Score=41.70 Aligned_cols=41 Identities=17% Similarity=0.067 Sum_probs=37.3
Q ss_pred CC-cchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 675 IR-EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 675 lr-~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
+| |++.+++++|+++|+++.++|+-+...+.++.+++|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 56 899999999999999999999878888899999999964
No 172
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=66.06 E-value=22 Score=36.59 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=36.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
.-++-+++.++++.|++. .++.++|--....+....+++||..
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 346778899999999888 9999999978888899999999653
No 173
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=65.90 E-value=11 Score=39.98 Aligned_cols=49 Identities=10% Similarity=0.092 Sum_probs=39.3
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcC---CChhhHHHHHHHcCcCC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIVT 715 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTG---Dn~~TA~~VA~~~gI~~ 715 (853)
|.+.-.+.+=|++.++|++|++.|++++++|| ..+.......+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44445566667999999999999999999996 66777777788888753
No 174
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=64.18 E-value=23 Score=36.79 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=40.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
.++.|++.+.+++|++.|+.+.+.|+-....+..+.+.+|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 5789999999999999999999999999999999999999974
No 175
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=63.02 E-value=44 Score=35.80 Aligned_cols=31 Identities=13% Similarity=0.202 Sum_probs=27.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChh
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQAL 702 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~ 702 (853)
+.|.=|++.+..+.+++.|++|+.+||....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 4567789999999999999999999999854
No 176
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=62.73 E-value=9.1 Score=40.04 Aligned_cols=29 Identities=14% Similarity=0.224 Sum_probs=25.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQAL 702 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~ 702 (853)
|.=|++.+.++.+++.|++|+.|||.+..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 55678999999999999999999998765
No 177
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=61.11 E-value=4.7 Score=39.73 Aligned_cols=44 Identities=14% Similarity=0.000 Sum_probs=38.8
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+.=..||++.+.+++|.+. .++++.|--....|..+.+.++..
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 44446799999999999987 999999999999999999988864
No 178
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=56.78 E-value=49 Score=38.87 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=63.2
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH-cCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQ-VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~-~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++++.+.+ ++.|.+ +++|+=...-+..+|++ +|+.. ++... ++ .
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VIgTe-----Le---------------------v 156 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADK----VLGTE-----LE---------------------V 156 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EEecc-----cE---------------------E
Confidence 677766554 456654 99999999999999988 89861 11100 00 0
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEE--eeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA--RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfA--r~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
..+=.+||. +-. .+.=++|..-++...........-||..||.++|+.|+-+.++..
T Consensus 157 ~~~G~~TG~-------------------i~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 157 SKSGRATGF-------------------MKKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CcCCEEeee-------------------ecCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 000122332 111 134466877776433211223578999999999999999999975
No 179
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=56.72 E-value=14 Score=36.27 Aligned_cols=35 Identities=23% Similarity=0.217 Sum_probs=27.6
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.++++ ++.++|.=+......+.+..|+.
T Consensus 89 ~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~ 123 (175)
T TIGR01493 89 LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP 123 (175)
T ss_pred CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH
Confidence 368899999998 36788888887777778888875
No 180
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=56.02 E-value=23 Score=34.93 Aligned_cols=93 Identities=22% Similarity=0.281 Sum_probs=63.9
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChh----hHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQAL----TACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~----TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
+|+-+++.|.+=++.|=.++.+||..+- ++...|+...|.+...
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~p-------------------------------- 162 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNP-------------------------------- 162 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcc--------------------------------
Confidence 5777899999999999999999999875 4555666666643211
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeCh--hhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEe
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVAL 827 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP--~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl 827 (853)
.+|+.-.| .| ..-...+|+.+- -..-||.-||.-|-|.|.+ ||-+
T Consensus 163 ------------------------------v~f~Gdk~k~~q-y~Kt~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 163 ------------------------------VIFAGDKPKPGQ-YTKTQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred ------------------------------eeeccCCCCccc-ccccHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 23444333 22 122234555553 4578999999999999997 8887
Q ss_pred ccCC
Q 003049 828 LNAV 831 (853)
Q Consensus 828 ~~~~ 831 (853)
..+.
T Consensus 211 lRAa 214 (237)
T COG3700 211 LRAA 214 (237)
T ss_pred EecC
Confidence 6443
No 181
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=54.74 E-value=40 Score=39.84 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=30.9
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCh------------hhHHHHHHHcCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQA------------LTACYVASQVHI 713 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~------------~TA~~VA~~~gI 713 (853)
+-|++.+++++|++.|++++++|.=.. ..+.++.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999997444 235566666665
No 182
>PTZ00445 p36-lilke protein; Provisional
Probab=52.52 E-value=25 Score=36.06 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=43.0
Q ss_pred HHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceee-----E-------eeecCCCCcchHHHHHHHhh
Q 003049 621 YIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAG-----F-------AVFNCPIREDSAKILSELKN 688 (853)
Q Consensus 621 ~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G-----~-------l~~~d~lr~~a~~~I~~L~~ 688 (853)
.+.-.+.+.+.|.|++++=+ |+|+++ . ..+--.++|+.+..+++|++
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~---------------------DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~ 89 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDF---------------------DLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN 89 (219)
T ss_pred HHHHHHHHHHcCCeEEEecc---------------------hhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH
Confidence 34446678899999998844 222222 1 11122379999999999999
Q ss_pred CCCcEEEEcCCChhh
Q 003049 689 SSQDLAMITGDQALT 703 (853)
Q Consensus 689 agi~v~miTGDn~~T 703 (853)
+||+++++|=-...+
T Consensus 90 ~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 90 SNIKISVVTFSDKEL 104 (219)
T ss_pred CCCeEEEEEccchhh
Confidence 999999999655443
No 183
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=50.45 E-value=16 Score=34.49 Aligned_cols=33 Identities=9% Similarity=-0.045 Sum_probs=28.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
+++.+++.+++++|++.|+.++++||.+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567889999999999999999999999886644
No 184
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=47.00 E-value=1.3e+02 Score=28.74 Aligned_cols=82 Identities=11% Similarity=0.055 Sum_probs=54.3
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC--cEEEEcCCCh--
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ--DLAMITGDQA-- 701 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi--~v~miTGDn~-- 701 (853)
.-+...|++|+-++...-+ +..-+.-.|.+-.++|+=.+--.--+..+++++.|+++|. .++|+=|--.
T Consensus 23 ~~l~~~GfeVi~LG~~v~~-------e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~ 95 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVLSPQ-------EEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVG 95 (134)
T ss_pred HHHHHCCCEEEECCCCCCH-------HHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcC
Confidence 3456789999988764321 2222334556778888888777777789999999999987 3455666321
Q ss_pred h----hHHHHHHHcCcC
Q 003049 702 L----TACYVASQVHIV 714 (853)
Q Consensus 702 ~----TA~~VA~~~gI~ 714 (853)
. .-..-++++|+.
T Consensus 96 ~~d~~~~~~~l~~~Gv~ 112 (134)
T TIGR01501 96 KQDFPDVEKRFKEMGFD 112 (134)
T ss_pred hhhhHHHHHHHHHcCCC
Confidence 1 113447888864
No 185
>PLN02423 phosphomannomutase
Probab=46.16 E-value=26 Score=37.05 Aligned_cols=41 Identities=20% Similarity=0.222 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHcCCEEEEEcC----CcccHHHHHh-CCceEEeccCC
Q 003049 790 QKELILTTFKAVGRMTLMCGD----GTNDVGALKQ-AHVGVALLNAV 831 (853)
Q Consensus 790 qK~~iV~~Lq~~g~~v~m~GD----G~ND~~ALk~-AdVGIAl~~~~ 831 (853)
.|..-++.|+ ...-|+..|| |-||.+||+. -=.||++.+-.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 6999999999 6667899999 8999999997 66788886433
No 186
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=45.16 E-value=2.4e+02 Score=29.01 Aligned_cols=73 Identities=21% Similarity=0.215 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---Hhh-----hcCCceEEE----EECCEEEEeecCCcCCCeEEEEcCCCCCCCCC
Q 003049 224 FTLFMLFMFESTMAKSRLKTLTEI---RRV-----RVDNQTIMV----HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGED 291 (853)
Q Consensus 224 ~~l~~lv~~~~~~~~~~~k~~~~l---~~m-----~~~~~~v~V----~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~ 291 (853)
+++++..+++....+++++..+++ ... ........+ ++-|....+...|.+|-|.+.++.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g------- 76 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG------- 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-------
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-------
Confidence 345555556666767777776665 111 111122222 2468899999999999999999844
Q ss_pred ceeecceeeecce
Q 003049 292 KSVPADMLILGGS 304 (853)
Q Consensus 292 ~~vPaD~ill~G~ 304 (853)
.+=+|---+.|+
T Consensus 77 -~~~vd~s~ltGe 88 (230)
T PF00122_consen 77 -SAYVDESALTGE 88 (230)
T ss_dssp -EEEEECHHHHSB
T ss_pred -cccccccccccc
Confidence 344455555564
No 187
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=44.92 E-value=54 Score=30.43 Aligned_cols=82 Identities=7% Similarity=0.140 Sum_probs=57.5
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC-cE-EEEcCCChhh
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DL-AMITGDQALT 703 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi-~v-~miTGDn~~T 703 (853)
.-+...|++|+.++-. .+ ..+.-+.-.+.+-.++++-.......+.+++.+++|++.|. ++ +|+=|-.+.-
T Consensus 21 ~~l~~~G~~vi~lG~~-vp------~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~ 93 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QT------PEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPE 93 (122)
T ss_pred HHHHHCCCEEEECCCC-CC------HHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHH
Confidence 3567899999888653 11 22333444566778888888888899999999999999977 44 5555555433
Q ss_pred HHHHHHHcCcC
Q 003049 704 ACYVASQVHIV 714 (853)
Q Consensus 704 A~~VA~~~gI~ 714 (853)
-..-.++.|+.
T Consensus 94 ~~~~~~~~G~d 104 (122)
T cd02071 94 DYELLKEMGVA 104 (122)
T ss_pred HHHHHHHCCCC
Confidence 35566799975
No 188
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=42.51 E-value=33 Score=36.79 Aligned_cols=47 Identities=17% Similarity=0.222 Sum_probs=41.0
Q ss_pred eeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 665 FAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 665 f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
.=|.+.-.+.+=|++.++|+.|+++|++++.+|--...+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34778888899999999999999999999999999999888666554
No 189
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=41.44 E-value=71 Score=29.26 Aligned_cols=82 Identities=13% Similarity=0.230 Sum_probs=57.6
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC-cE-EEEcCCChhh
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DL-AMITGDQALT 703 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi-~v-~miTGDn~~T 703 (853)
..+...|++|+-++.. ++ .+++...-.+.+-.++|+-....+--+.+++.++++|+.+- .+ +++-|-.+..
T Consensus 21 ~~l~~~G~~V~~lg~~-~~------~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~ 93 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VP------PEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTR 93 (119)
T ss_pred HHHHHCCCEEEECCCC-CC------HHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCCh
Confidence 4566799999877632 22 12233334566778899888877777999999999999986 44 6777755444
Q ss_pred HHHHHHHcCcC
Q 003049 704 ACYVASQVHIV 714 (853)
Q Consensus 704 A~~VA~~~gI~ 714 (853)
.-..+++.|..
T Consensus 94 ~~~~~~~~G~D 104 (119)
T cd02067 94 DFKFLKEIGVD 104 (119)
T ss_pred hHHHHHHcCCe
Confidence 35688999975
No 190
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.90 E-value=15 Score=43.32 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=35.5
Q ss_pred EEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce
Q 003049 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304 (853)
Q Consensus 259 V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~ 304 (853)
.+|||+..++|..-||.||||-+++|+ .-||.+.=++|+
T Consensus 160 afRDGhlm~lP~~LLVeGDiIa~RPGQ-------eafan~~g~~dd 198 (1354)
T KOG4383|consen 160 AFRDGHLMELPRILLVEGDIIAFRPGQ-------EAFANCEGFDDD 198 (1354)
T ss_pred HhccCeeeecceeEEEeccEEEecCCc-------cccccccccCCC
Confidence 479999999999999999999999998 889988877774
No 191
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=39.97 E-value=7.1e+02 Score=29.57 Aligned_cols=36 Identities=25% Similarity=0.308 Sum_probs=27.1
Q ss_pred ECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeeccee
Q 003049 261 RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSA 305 (853)
Q Consensus 261 R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~ 305 (853)
.-|....+...|.+|-|-+.+.. + .=+|--.+.|+.
T Consensus 74 ~~GDiv~v~~G~~iP~Dg~ii~g-~--------~~vdes~lTGEs 109 (536)
T TIGR01512 74 KVGDVVVVKPGERVPVDGVVLSG-T--------STVDESALTGES 109 (536)
T ss_pred CCCCEEEEcCCCEeecceEEEeC-c--------EEEEecccCCCC
Confidence 46888999999999999999973 2 235666666653
No 192
>PRK11507 ribosome-associated protein; Provisional
Probab=39.50 E-value=34 Score=28.63 Aligned_cols=26 Identities=23% Similarity=0.208 Sum_probs=22.6
Q ss_pred EEEECCEEEEeecCCcCCCeEEEEcC
Q 003049 258 MVHRCGKWVKLAGTDLVPGDVVSIGR 283 (853)
Q Consensus 258 ~V~R~g~~~~I~s~~LvpGDiV~l~~ 283 (853)
.|..||+...-....|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 46779998888899999999999963
No 193
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=38.78 E-value=2.9e+02 Score=34.45 Aligned_cols=94 Identities=12% Similarity=0.027 Sum_probs=48.4
Q ss_pred cHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hh----hcCCceEEE--
Q 003049 189 TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIR---RV----RVDNQTIMV-- 259 (853)
Q Consensus 189 ~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~---~m----~~~~~~v~V-- 259 (853)
.|++.|++-+.--+.+..+++.++.-+.+..... +++++...+.....++..+++++|+ .. ........|
T Consensus 29 ~~~~~~~~~~~~lL~~aa~~s~~~~~~~~~~~i~-~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~ 107 (755)
T TIGR01647 29 KFLGFFWNPLSWVMEAAAIIAIALENWVDFVIIL-GLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPA 107 (755)
T ss_pred HHHHHHhchHHHHHHHHHHHHHhhcchhhhhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEh
Confidence 3444444443333444445555555555544333 3333333444444444444443332 21 111122222
Q ss_pred --EECCEEEEeecCCcCCCeEEEEcC
Q 003049 260 --HRCGKWVKLAGTDLVPGDVVSIGR 283 (853)
Q Consensus 260 --~R~g~~~~I~s~~LvpGDiV~l~~ 283 (853)
+.-|....+...|.+|-|.+.++.
T Consensus 108 ~~Lv~GDiV~l~~Gd~IPaDg~vi~g 133 (755)
T TIGR01647 108 SELVPGDVVRLKIGDIVPADCRLFEG 133 (755)
T ss_pred hhCcCCCEEEECCCCEEeceEEEEec
Confidence 346888999999999999999974
No 194
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=38.53 E-value=1.6e+02 Score=28.95 Aligned_cols=101 Identities=18% Similarity=0.207 Sum_probs=66.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc--------CcCCCCeEEEccCCCCceeEeecCCcccccccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV--------HIVTKPVLILCPVKNGKVYEWVSPDETEKIQYS 744 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~--------gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~ 744 (853)
|..++++.+..+.+++.|.+++-+|+...--|...-.-+ ++...+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv-------------------------- 79 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPV-------------------------- 79 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCE--------------------------
Confidence 589999999999999999999999999866554332222 2221111
Q ss_pred hhhhccccCceeEEEeh-hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc---C--CEEEEEcCCcccHHHH
Q 003049 745 EKEVEGLTDAHDLCIGG-DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV---G--RMTLMCGDGTNDVGAL 818 (853)
Q Consensus 745 ~~~~~~~~~~~~l~itG-~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~---g--~~v~m~GDG~ND~~AL 818 (853)
..+- .-+..+.. .|..|-.-+.|...++.+++. . -..+..|...+|+.|-
T Consensus 80 -------------~~sP~~l~~al~r-----------Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY 135 (157)
T PF08235_consen 80 -------------LLSPDSLFSALHR-----------EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAY 135 (157)
T ss_pred -------------EECCcchhhhhhc-----------cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHH
Confidence 1110 00111111 456665667899999999875 2 3355667788999998
Q ss_pred HhCCc
Q 003049 819 KQAHV 823 (853)
Q Consensus 819 k~AdV 823 (853)
+++.|
T Consensus 136 ~~vGi 140 (157)
T PF08235_consen 136 KAVGI 140 (157)
T ss_pred HHcCC
Confidence 87765
No 195
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=37.97 E-value=50 Score=33.61 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=57.4
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCc--EEEEcCCChhh
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD--LAMITGDQALT 703 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~--v~miTGDn~~T 703 (853)
.-+...|++|+-++... + .+++-..-.+.+-.++|+-....+--+..++.|+.|++.|.+ +.++=|-.+.+
T Consensus 106 ~~l~~~G~~vi~LG~~v-p------~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~~ 178 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDV-P------IDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPVT 178 (197)
T ss_pred HHHHhCCcEEEECCCCC-C------HHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhcC
Confidence 35677999999887521 1 122223334567788999888888899999999999999875 44444446666
Q ss_pred HHHHHHHcCcC
Q 003049 704 ACYVASQVHIV 714 (853)
Q Consensus 704 A~~VA~~~gI~ 714 (853)
. ..|+++|-.
T Consensus 179 ~-~~~~~~gad 188 (197)
T TIGR02370 179 Q-DWADKIGAD 188 (197)
T ss_pred H-HHHHHhCCc
Confidence 4 688988865
No 196
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=37.87 E-value=16 Score=36.42 Aligned_cols=13 Identities=54% Similarity=0.733 Sum_probs=12.1
Q ss_pred EEeCCCCcccCCC
Q 003049 487 CCFDKTGTLTSDD 499 (853)
Q Consensus 487 icfDKTGTLT~~~ 499 (853)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999987
No 197
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=36.52 E-value=4.6e+02 Score=33.66 Aligned_cols=37 Identities=32% Similarity=0.381 Sum_probs=27.4
Q ss_pred ECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeeccee
Q 003049 261 RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSA 305 (853)
Q Consensus 261 R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~ 305 (853)
.-|....+...|.+|.|.+.+... ..=+|=-.|.|+.
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~g~--------~l~VdES~LTGES 221 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFISGL--------SLEIDESSITGES 221 (941)
T ss_pred CCCCEEEECCCCEecccEEEEEcC--------cEEEEecccCCCC
Confidence 468889999999999999999742 2445666666643
No 198
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=36.46 E-value=1.2e+02 Score=29.06 Aligned_cols=82 Identities=11% Similarity=0.060 Sum_probs=58.7
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC-c-EEEEcCCC---
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-D-LAMITGDQ--- 700 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi-~-v~miTGDn--- 700 (853)
.-+..+|++|+.++... ...++-+.-.+.+-.++|+-.+...-.+.+++.+++|++.+. . .+++-|--
T Consensus 25 ~~lr~~G~eVi~LG~~v-------p~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~ 97 (137)
T PRK02261 25 RALTEAGFEVINLGVMT-------SQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVG 97 (137)
T ss_pred HHHHHCCCEEEECCCCC-------CHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCC
Confidence 45668999999988642 123344455667888899988888999999999999999966 3 35555533
Q ss_pred ---hhhHHHHHHHcCcC
Q 003049 701 ---ALTACYVASQVHIV 714 (853)
Q Consensus 701 ---~~TA~~VA~~~gI~ 714 (853)
+.-....++++|+.
T Consensus 98 ~~~~~~~~~~l~~~G~~ 114 (137)
T PRK02261 98 KHDFEEVEKKFKEMGFD 114 (137)
T ss_pred ccChHHHHHHHHHcCCC
Confidence 23344678899964
No 199
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=35.36 E-value=1e+02 Score=30.43 Aligned_cols=79 Identities=14% Similarity=0.175 Sum_probs=53.3
Q ss_pred HHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC---cEEEEcC
Q 003049 622 IETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ---DLAMITG 698 (853)
Q Consensus 622 ~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi---~v~miTG 698 (853)
.+-+.++...|.+++.++=. ++.-+..=..=+|+=.+.--.||-.+..=+.|++.++ +|+|+ |
T Consensus 52 ~~W~~e~k~~gi~v~vvSNn-------------~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-G 117 (175)
T COG2179 52 RAWLAELKEAGIKVVVVSNN-------------KESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-G 117 (175)
T ss_pred HHHHHHHHhcCCEEEEEeCC-------------CHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-c
Confidence 45567888999999988531 1111111122244444455567777777777777777 57776 9
Q ss_pred CChhhHHHHHHHcCcC
Q 003049 699 DQALTACYVASQVHIV 714 (853)
Q Consensus 699 Dn~~TA~~VA~~~gI~ 714 (853)
|...|-+--|+..|+-
T Consensus 118 DqL~TDVlggnr~G~~ 133 (175)
T COG2179 118 DQLFTDVLGGNRAGMR 133 (175)
T ss_pred chhhhhhhcccccCcE
Confidence 9999999999999986
No 200
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=34.80 E-value=1.4e+02 Score=32.85 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=38.1
Q ss_pred eEeeecCCCCcchHHHHHHHhhC----CCcEEEEcCCChhh----HHHHHHHcCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNS----SQDLAMITGDQALT----ACYVASQVHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~a----gi~v~miTGDn~~T----A~~VA~~~gI~ 714 (853)
|.+.-.+++-+++.+++++|+.. |+++..+|--.-.+ +..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 67777888999999999999998 99999999665333 45555777774
No 201
>PLN02591 tryptophan synthase
Probab=34.25 E-value=1.7e+02 Score=31.03 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=30.8
Q ss_pred hhhHHHHHHHHHHcCCEEEEEcCCcc---cHHHHHhC-CceEEeccC
Q 003049 788 PEQKELILTTFKAVGRMTLMCGDGTN---DVGALKQA-HVGVALLNA 830 (853)
Q Consensus 788 P~qK~~iV~~Lq~~g~~v~m~GDG~N---D~~ALk~A-dVGIAl~~~ 830 (853)
|++=...++.+|+....-.+||=|++ |+..+.++ -=|+-+|++
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 56667778888887677788999999 77776654 225656554
No 202
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=32.56 E-value=3.3e+02 Score=25.11 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=47.2
Q ss_pred hHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhC-CC---cEEE
Q 003049 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNS-SQ---DLAM 695 (853)
Q Consensus 620 ~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~a-gi---~v~m 695 (853)
...+.++.+.++|+++..++-+..............+---.-++.+-.........||...-....+++. ++ +++|
T Consensus 29 ~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 108 (132)
T TIGR01662 29 EVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVY 108 (132)
T ss_pred CHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCChhheEE
Confidence 3445667788899988777654311100000000000000112222222211124466554444445555 35 3444
Q ss_pred EcCCChhhHHHHHHHcCcC
Q 003049 696 ITGDQALTACYVASQVHIV 714 (853)
Q Consensus 696 iTGDn~~TA~~VA~~~gI~ 714 (853)
=||+..+-...|+++|+.
T Consensus 109 -IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 109 -VGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -EcCCCcccHHHHHHCCCe
Confidence 599878889999999986
No 203
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=31.92 E-value=1.3e+02 Score=29.98 Aligned_cols=100 Identities=12% Similarity=0.304 Sum_probs=58.3
Q ss_pred EEEcCcHHHHHHhhccCC--------hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeec
Q 003049 601 AFVKGAPETIQDRLTDLP--------SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFN 672 (853)
Q Consensus 601 ~~~KGapE~i~~~~~~ip--------~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~ 672 (853)
+...|..-..+..-.++| .++.+.+......|.++-.++|...-.. ...+..+ + ++ =+-...+.
T Consensus 38 iIsRG~ta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~-~~~~~~l----l--~~-~i~~~~~~ 109 (176)
T PF06506_consen 38 IISRGGTAELLRKHVSIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPG-LESIEEL----L--GV-DIKIYPYD 109 (176)
T ss_dssp EEEEHHHHHHHHCC-SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCC-HHHHHHH----H--T--EEEEEEES
T ss_pred EEECCHHHHHHHHhCCCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHH-HHHHHHH----h--CC-ceEEEEEC
Confidence 344454444444333555 3455566666667788888999765421 1211111 1 11 12333444
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+ ..|....|+++++.|+++++ |+. .++..|++.|+.
T Consensus 110 ~--~~e~~~~i~~~~~~G~~viV--Gg~--~~~~~A~~~gl~ 145 (176)
T PF06506_consen 110 S--EEEIEAAIKQAKAEGVDVIV--GGG--VVCRLARKLGLP 145 (176)
T ss_dssp S--HHHHHHHHHHHHHTT--EEE--ESH--HHHHHHHHTTSE
T ss_pred C--HHHHHHHHHHHHHcCCcEEE--CCH--HHHHHHHHcCCc
Confidence 4 56999999999999999888 665 468999999996
No 204
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=31.62 E-value=68 Score=31.85 Aligned_cols=41 Identities=27% Similarity=0.261 Sum_probs=31.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEc-CCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMIT-GDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miT-GDn~~TA~~VA~~~gI~ 714 (853)
.+-||+++++++|++.|+++.+.| =|.|..|..+-+.++|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467999999999999999999999 58999999999999997
No 205
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=30.51 E-value=59 Score=34.52 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=25.5
Q ss_pred HHHHHHHHcCCEEEEEcCCc-ccHHHHHhCCce-EEeccC
Q 003049 793 LILTTFKAVGRMTLMCGDGT-NDVGALKQAHVG-VALLNA 830 (853)
Q Consensus 793 ~iV~~Lq~~g~~v~m~GDG~-ND~~ALk~AdVG-IAl~~~ 830 (853)
.+++.+......++|+||.. +|..+-++|.+- |.+..|
T Consensus 187 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G 226 (257)
T TIGR01458 187 EALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTG 226 (257)
T ss_pred HHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence 33344433346799999996 999999998874 444344
No 206
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=30.20 E-value=79 Score=32.22 Aligned_cols=81 Identities=12% Similarity=0.220 Sum_probs=57.5
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC--cEEEEcCCChhh
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ--DLAMITGDQALT 703 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi--~v~miTGDn~~T 703 (853)
.-+...|++|+-++. .++ ..++-+.-.+.+-.++|+-.....--+..++.|+.||+.+. ++.++=|-.+.+
T Consensus 104 ~~l~~~G~~vi~lG~-~~p------~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~ 176 (201)
T cd02070 104 TMLEANGFEVIDLGR-DVP------PEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN 176 (201)
T ss_pred HHHHHCCCEEEECCC-CCC------HHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC
Confidence 456789999987763 222 12233333456778899888888888999999999999987 665444555666
Q ss_pred HHHHHHHcCcC
Q 003049 704 ACYVASQVHIV 714 (853)
Q Consensus 704 A~~VA~~~gI~ 714 (853)
. ..++++|-.
T Consensus 177 ~-~~~~~~GaD 186 (201)
T cd02070 177 Q-EFADEIGAD 186 (201)
T ss_pred H-HHHHHcCCc
Confidence 4 589998864
No 207
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=29.77 E-value=1.6e+02 Score=31.57 Aligned_cols=82 Identities=16% Similarity=0.200 Sum_probs=49.2
Q ss_pred HHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCc-EEEEcCC
Q 003049 621 YIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD-LAMITGD 699 (853)
Q Consensus 621 ~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~-v~miTGD 699 (853)
..+..+.+...|---+.+.+............-..+-.-+.++..+--+...|.=|.+..+.+..++++|++ +..+|||
T Consensus 17 l~~~~~~l~~~~pd~isvT~~~~~~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD 96 (272)
T TIGR00676 17 LWETVDRLSPLDPDFVSVTYGAGGSTRDRTVRIVRRIKKETGIPTVPHLTCIGATREEIREILREYRELGIRHILALRGD 96 (272)
T ss_pred HHHHHHHHhcCCCCEEEeccCCCCCcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 344455555444444555553332111111111111112346777777888887788899999999999997 5559999
Q ss_pred Chh
Q 003049 700 QAL 702 (853)
Q Consensus 700 n~~ 702 (853)
.+.
T Consensus 97 ~~~ 99 (272)
T TIGR00676 97 PPK 99 (272)
T ss_pred CCC
Confidence 984
No 208
>PRK11479 hypothetical protein; Provisional
Probab=29.47 E-value=14 Score=39.42 Aligned_cols=18 Identities=28% Similarity=0.523 Sum_probs=16.0
Q ss_pred EeecCCcCCCeEEEEcCC
Q 003049 267 KLAGTDLVPGDVVSIGRS 284 (853)
Q Consensus 267 ~I~s~~LvpGDiV~l~~g 284 (853)
.|+.++|.|||||....+
T Consensus 59 ~Vs~~~LqpGDLVFfst~ 76 (274)
T PRK11479 59 EITAPDLKPGDLLFSSSL 76 (274)
T ss_pred ccChhhCCCCCEEEEecC
Confidence 789999999999998754
No 209
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=29.41 E-value=94 Score=31.81 Aligned_cols=51 Identities=8% Similarity=0.124 Sum_probs=42.2
Q ss_pred ceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH---cCcC
Q 003049 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ---VHIV 714 (853)
Q Consensus 664 ~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~---~gI~ 714 (853)
.+-|.+-.++-.=|++.++++.|+.++.+|.-+|.-....-..+.++ ||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 35688999999999999999999999999999987777666666654 5654
No 210
>PRK06437 hypothetical protein; Provisional
Probab=28.37 E-value=67 Score=26.50 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=25.7
Q ss_pred HhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEc
Q 003049 248 RRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIG 282 (853)
Q Consensus 248 ~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~ 282 (853)
+.+...+..+.|.+||+... +..-|..||-|.|-
T Consensus 28 ~~Lgi~~~~vaV~vNg~iv~-~~~~L~dgD~Veiv 61 (67)
T PRK06437 28 KDLGLDEEEYVVIVNGSPVL-EDHNVKKEDDVLIL 61 (67)
T ss_pred HHcCCCCccEEEEECCEECC-CceEcCCCCEEEEE
Confidence 44555667888889998876 55668899998874
No 211
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=28.35 E-value=1.4e+02 Score=27.15 Aligned_cols=12 Identities=33% Similarity=0.407 Sum_probs=5.8
Q ss_pred CcCCCeEEEEcC
Q 003049 272 DLVPGDVVSIGR 283 (853)
Q Consensus 272 ~LvpGDiV~l~~ 283 (853)
+|+|||-|....
T Consensus 52 ~Lk~Gd~VvT~g 63 (106)
T PRK05585 52 SLAKGDEVVTNG 63 (106)
T ss_pred hcCCCCEEEECC
Confidence 345555554443
No 212
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=27.80 E-value=1.6e+02 Score=27.74 Aligned_cols=81 Identities=11% Similarity=0.067 Sum_probs=57.1
Q ss_pred HHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC-cEEEEcCCCh----
Q 003049 627 KYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DLAMITGDQA---- 701 (853)
Q Consensus 627 ~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi-~v~miTGDn~---- 701 (853)
-+...|+.|+-++...-+ +..-+...|.+-.++|+-.+--.--+..+++++.|+++|+ .+.++=|-++
T Consensus 22 ~L~~~GfeVidLG~~v~~-------e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~ 94 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQ-------EEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGK 94 (128)
T ss_pred HHHHCCCEEEECCCCCCH-------HHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCCh
Confidence 456799999988764321 2233344566888999988888888999999999999998 5544444442
Q ss_pred ---hhHHHHHHHcCcC
Q 003049 702 ---LTACYVASQVHIV 714 (853)
Q Consensus 702 ---~TA~~VA~~~gI~ 714 (853)
.....-.+++|+.
T Consensus 95 ~d~~~~~~~L~~~Gv~ 110 (128)
T cd02072 95 QDFEDVEKRFKEMGFD 110 (128)
T ss_pred hhhHHHHHHHHHcCCC
Confidence 2233558888885
No 213
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=27.72 E-value=2.2e+02 Score=29.99 Aligned_cols=40 Identities=15% Similarity=0.290 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCcc---cHHHHHh-CCceEEeccC
Q 003049 790 QKELILTTFKAVGRMTLMCGDGTN---DVGALKQ-AHVGVALLNA 830 (853)
Q Consensus 790 qK~~iV~~Lq~~g~~v~m~GDG~N---D~~ALk~-AdVGIAl~~~ 830 (853)
.-...|+.+++....-.++|=|+| |+..+.. || |+-+|++
T Consensus 174 ~~~~~i~~lr~~~~~pI~vggGI~~~e~~~~~~~~AD-gvVvGSa 217 (242)
T cd04724 174 DLKELIKRIRKYTDLPIAVGFGISTPEQAAEVAKYAD-GVIVGSA 217 (242)
T ss_pred hHHHHHHHHHhcCCCcEEEEccCCCHHHHHHHHccCC-EEEECHH
Confidence 344566667765556678899999 5666665 44 6666643
No 214
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=27.62 E-value=1.9e+02 Score=27.46 Aligned_cols=82 Identities=13% Similarity=0.142 Sum_probs=58.9
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC-cE-EEEcCCChhh
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DL-AMITGDQALT 703 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi-~v-~miTGDn~~T 703 (853)
..+...|+.|+-++...- ....-+...|.+-..+|+-++...-.+..++.++.|+++|. ++ +|+=|-.+..
T Consensus 24 ~~l~~~GfeVi~lg~~~s-------~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~ 96 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQT-------PEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQ 96 (132)
T ss_pred HHHHhCCcEEEECCCCCC-------HHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChH
Confidence 456788999987765321 12233344577889999999999999999999999999987 44 5554445544
Q ss_pred HHHHHHHcCcC
Q 003049 704 ACYVASQVHIV 714 (853)
Q Consensus 704 A~~VA~~~gI~ 714 (853)
-..--+++|+.
T Consensus 97 ~~~~l~~~Gvd 107 (132)
T TIGR00640 97 DFDELKEMGVA 107 (132)
T ss_pred hHHHHHHCCCC
Confidence 46668888985
No 215
>PRK14715 DNA polymerase II large subunit; Provisional
Probab=26.74 E-value=37 Score=43.42 Aligned_cols=30 Identities=30% Similarity=0.504 Sum_probs=27.3
Q ss_pred ceEEEEECCEEEEeecCCcCCCeEEEEcCC
Q 003049 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRS 284 (853)
Q Consensus 255 ~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g 284 (853)
.++.|+++|+|....+.+|.|||.|.|...
T Consensus 988 HPVLv~~~Gk~i~K~A~dlK~GD~vvIPK~ 1017 (1627)
T PRK14715 988 HPVMVYENGKFIKKRAMDVKEGDLMLIPKL 1017 (1627)
T ss_pred CceEEeccCccceeehhhcCcCceeecccc
Confidence 567889999999999999999999999864
No 216
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=26.58 E-value=90 Score=36.43 Aligned_cols=51 Identities=31% Similarity=0.399 Sum_probs=40.1
Q ss_pred EEeecCCcCCCeEEEEcCCC-----CCCCCCceeecceeeec----ceeEEeeccCCCCc
Q 003049 266 VKLAGTDLVPGDVVSIGRSS-----GQTGEDKSVPADMLILG----GSAIVNEAILTGES 316 (853)
Q Consensus 266 ~~I~s~~LvpGDiV~l~~g~-----~d~~~~~~vPaD~ill~----G~~~VdES~LTGES 316 (853)
-.++..-.+|||||.-..|. ...++|+.|=||++..- ...+||=+.|||--
T Consensus 309 Nm~~~~A~rPgDVi~~~~GkTVEV~NTDAEGRLvLADal~ya~~~~p~~iiDiATLTGa~ 368 (483)
T PRK00913 309 NMPSGNAYRPGDVLTSMSGKTIEVLNTDAEGRLVLADALTYAERFKPDAIIDVATLTGAC 368 (483)
T ss_pred cCCCCCCCCCCCEEEECCCcEEEeecCCcccceeehhHHHHhhhcCCCEEEEecchHHHH
Confidence 34778899999999888764 11267889999998764 35899999999975
No 217
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=26.46 E-value=1.4e+02 Score=25.89 Aligned_cols=13 Identities=31% Similarity=0.192 Sum_probs=6.4
Q ss_pred CcCCCeEEEEcCC
Q 003049 272 DLVPGDVVSIGRS 284 (853)
Q Consensus 272 ~LvpGDiV~l~~g 284 (853)
+|.|||-|....|
T Consensus 37 ~L~~Gd~VvT~gG 49 (84)
T TIGR00739 37 SLKKGDKVLTIGG 49 (84)
T ss_pred hCCCCCEEEECCC
Confidence 4455555554443
No 218
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.30 E-value=73 Score=29.29 Aligned_cols=37 Identities=16% Similarity=0.216 Sum_probs=28.4
Q ss_pred CcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 676 REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 676 r~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-+++.++++.+++.|++++.+|++.++ ...|.+-|+.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~l--~~~~~~~~~~ 92 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGKL--LEMAREHGVP 92 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCchH--HHHHHHcCCc
Confidence 457889999999999999999998863 3356555543
No 219
>PRK08508 biotin synthase; Provisional
Probab=25.82 E-value=5.5e+02 Score=27.59 Aligned_cols=45 Identities=20% Similarity=0.037 Sum_probs=30.5
Q ss_pred hHHHHHHHhhCCCcEE-------------EEcCCChhh---HHHHHHHcCcCCCCeEEEcc
Q 003049 679 SAKILSELKNSSQDLA-------------MITGDQALT---ACYVASQVHIVTKPVLILCP 723 (853)
Q Consensus 679 a~~~I~~L~~agi~v~-------------miTGDn~~T---A~~VA~~~gI~~~~~~il~~ 723 (853)
+++.+++|+++|..-+ +.||....- +...|+++||......++..
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~Gl 161 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFGL 161 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEec
Confidence 6899999999998433 456655554 55568899986544444443
No 220
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=25.22 E-value=3.2e+02 Score=32.45 Aligned_cols=81 Identities=11% Similarity=0.190 Sum_probs=51.1
Q ss_pred hHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCC
Q 003049 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699 (853)
Q Consensus 620 ~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGD 699 (853)
++...+......+.++-.++|..+... ...+.+ -+ ++.+-- ..++ =..|+...|++|++.|+++++ ||
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~-~~~~~~----ll--~~~i~~-~~~~--~~~e~~~~~~~l~~~G~~~vi--G~ 152 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPA-LRRFQA----AF--NLDIVQ-RSYV--TEEDARSCVNDLRARGIGAVV--GA 152 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHH-HHHHHH----Hh--CCceEE-EEec--CHHHHHHHHHHHHHCCCCEEE--CC
Confidence 344445555556678888888665421 111111 11 222222 2222 357999999999999999998 88
Q ss_pred ChhhHHHHHHHcCcC
Q 003049 700 QALTACYVASQVHIV 714 (853)
Q Consensus 700 n~~TA~~VA~~~gI~ 714 (853)
. ++...|++.|+.
T Consensus 153 ~--~~~~~A~~~gl~ 165 (526)
T TIGR02329 153 G--LITDLAEQAGLH 165 (526)
T ss_pred h--HHHHHHHHcCCc
Confidence 8 668999999996
No 221
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=25.13 E-value=82 Score=29.03 Aligned_cols=86 Identities=14% Similarity=0.133 Sum_probs=48.1
Q ss_pred HHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCc-EEEEcCCCh
Q 003049 623 ETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD-LAMITGDQA 701 (853)
Q Consensus 623 ~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~-v~miTGDn~ 701 (853)
..++.+.+.|++|..+.-|.-+-....-..++. +...+.. +++-.-..+.+.++++++.+.|++ +|+.+|...
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~--e~p~~iD----lavv~~~~~~~~~~v~~~~~~g~~~v~~~~g~~~ 91 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLA--EIPEPID----LAVVCVPPDKVPEIVDEAAALGVKAVWLQPGAES 91 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGG--GCSST-S----EEEE-S-HHHHHHHHHHHHHHT-SEEEE-TTS--
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeecccc--CCCCCCC----EEEEEcCHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence 456777789999998855431100000001111 0111111 222233466899999999999995 899999999
Q ss_pred hhHHHHHHHcCcC
Q 003049 702 LTACYVASQVHIV 714 (853)
Q Consensus 702 ~TA~~VA~~~gI~ 714 (853)
..+...|++.||-
T Consensus 92 ~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 92 EELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHTT-E
T ss_pred HHHHHHHHHcCCE
Confidence 9999999999884
No 222
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=25.08 E-value=1e+02 Score=36.00 Aligned_cols=63 Identities=24% Similarity=0.264 Sum_probs=44.7
Q ss_pred CceEEEEECCEEEEeecCCcCCCeEEEEcCCC-----CCCCCCceeecceeeec----ceeEEeeccCCCCc
Q 003049 254 NQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSS-----GQTGEDKSVPADMLILG----GSAIVNEAILTGES 316 (853)
Q Consensus 254 ~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~-----~d~~~~~~vPaD~ill~----G~~~VdES~LTGES 316 (853)
|.++..+--=-.-.++.+-.+|||||.-..|. ...++|+.|=||++--- -+.+||=+.|||--
T Consensus 283 ~vnV~~i~~~~EN~is~~A~rPgDVi~s~~GkTVEI~NTDAEGRLVLaDal~ya~~~~p~~iIDiATLTGA~ 354 (468)
T cd00433 283 PVNVVGVLPLAENMISGNAYRPGDVITSRSGKTVEILNTDAEGRLVLADALTYAQEFKPDLIIDIATLTGAA 354 (468)
T ss_pred CceEEEEEEeeecCCCCCCCCCCCEeEeCCCcEEEEecCCcccceeehhHHHHHhhcCCCEEEEecchHHHH
Confidence 34444443323335788999999999888764 11367889999998753 35899999999975
No 223
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=25.03 E-value=90 Score=30.48 Aligned_cols=44 Identities=14% Similarity=0.037 Sum_probs=38.9
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
...-.+||++.+.+++|++. +++.+.|.=....|..+.+.++..
T Consensus 54 ~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 54 WYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34456899999999999955 999999999999999999999875
No 224
>KOG1504 consensus Ornithine carbamoyltransferase OTC/ARG3 [Amino acid transport and metabolism]
Probab=25.00 E-value=62 Score=33.93 Aligned_cols=43 Identities=28% Similarity=0.355 Sum_probs=32.9
Q ss_pred HHHHHHH-HH-cCCEEEEEcCCccc--HHHHHhCCceEEeccCCCcC
Q 003049 792 ELILTTF-KA-VGRMTLMCGDGTND--VGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 792 ~~iV~~L-q~-~g~~v~m~GDG~ND--~~ALk~AdVGIAl~~~~~~~ 834 (853)
..|++.+ |. .|.+++.+|||-|= .-++.+|-+||.++-+++-.
T Consensus 178 LTi~E~f~ks~~glkvawiGD~NNvlhs~mia~ak~gih~s~atPkg 224 (346)
T KOG1504|consen 178 LTIIEHFGKSVEGLKVAWIGDGNNVLHSWMIAAAKFGIHFSCATPKG 224 (346)
T ss_pred HHHHHHHhccccccEEEEEccccHHHHHHHHHhhhcceEEEecCCCC
Confidence 4566666 42 68899999999883 44678899999998777654
No 225
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=24.47 E-value=43 Score=27.61 Aligned_cols=24 Identities=42% Similarity=0.556 Sum_probs=13.7
Q ss_pred EEECCEEEEeecCCcCCCeEEEEc
Q 003049 259 VHRCGKWVKLAGTDLVPGDVVSIG 282 (853)
Q Consensus 259 V~R~g~~~~I~s~~LvpGDiV~l~ 282 (853)
|..||+...-....|.|||+|.+.
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~~ 58 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEID 58 (65)
T ss_dssp HEETTB----SS----SSEEEEET
T ss_pred eEECCEEccccCCcCCCCCEEEEC
Confidence 567888888888999999999994
No 226
>PF14800 DUF4481: Domain of unknown function (DUF4481)
Probab=23.64 E-value=63 Score=34.68 Aligned_cols=23 Identities=13% Similarity=0.059 Sum_probs=17.5
Q ss_pred cccCCcceeEEEeeeccccccee
Q 003049 4 FHVGGKVVDRVDLLRKKHWVWRL 26 (853)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~ 26 (853)
-++.+|.|.+..+|+-+++-+-.
T Consensus 47 ~al~~p~VRRy~~yNs~~fr~~~ 69 (308)
T PF14800_consen 47 SALLDPQVRRYTLYNSRYFRLLV 69 (308)
T ss_pred HhccchhheeeeeecchHHHHHH
Confidence 35778999999999988754433
No 227
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=23.54 E-value=4.6e+02 Score=25.27 Aligned_cols=85 Identities=15% Similarity=0.110 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCc--ceeeEeeecC--CCCcchHHHHHHHhhCCC---
Q 003049 619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGL--TFAGFAVFNC--PIREDSAKILSELKNSSQ--- 691 (853)
Q Consensus 619 ~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl--~f~G~l~~~d--~lr~~a~~~I~~L~~agi--- 691 (853)
+...+.++.+.++|+++..+.-..-. . .... .. .++ .|-..+.-++ .-||+..-....+++.|+
T Consensus 88 ~g~~~~l~~l~~~g~~~~i~Tn~~~~-----~-~~~~-~~--~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 158 (183)
T TIGR01509 88 PGVEPLLEALRARGKKLALLTNSPRD-----H-AVLV-QE--LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPE 158 (183)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCchH-----H-HHHH-Hh--cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 44566677888889988666432211 1 0000 00 122 1333333221 246655555555566665
Q ss_pred cEEEEcCCChhhHHHHHHHcCcC
Q 003049 692 DLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 692 ~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+++|+ ||++ .-+.-|+++|+.
T Consensus 159 ~~~~v-gD~~-~di~aA~~~G~~ 179 (183)
T TIGR01509 159 ECLFV-DDSP-AGIEAAKAAGMH 179 (183)
T ss_pred eEEEE-cCCH-HHHHHHHHcCCE
Confidence 46666 9998 478889999985
No 228
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=23.51 E-value=4.7e+02 Score=33.28 Aligned_cols=93 Identities=19% Similarity=0.134 Sum_probs=52.7
Q ss_pred HHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhh----cCCceEEE----EECCEEEEeecCC
Q 003049 204 VFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIR---RVR----VDNQTIMV----HRCGKWVKLAGTD 272 (853)
Q Consensus 204 vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~---~m~----~~~~~v~V----~R~g~~~~I~s~~ 272 (853)
+..+++++++.+.+.....+++++. +++.....++..+++++|+ ... .......+ +.-|....+...|
T Consensus 69 ~aa~ls~~~g~~~~~~~i~~~i~~~-~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd 147 (884)
T TIGR01522 69 ASAVISVFMGNIDDAVSITLAILIV-VTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGD 147 (884)
T ss_pred HHHHHHHHHcchhhHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCC
Confidence 3345566666666766554443333 3444444445555555553 210 11112222 2358889999999
Q ss_pred cCCCeEEEEcCCCCCCCCCceeecceeeeccee
Q 003049 273 LVPGDVVSIGRSSGQTGEDKSVPADMLILGGSA 305 (853)
Q Consensus 273 LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~ 305 (853)
.+|-|.+.++..+ .=+|=-.+.|+.
T Consensus 148 ~IPaDg~ii~g~~--------l~VDES~LTGES 172 (884)
T TIGR01522 148 RVPADLRIVEAVD--------LSIDESNLTGET 172 (884)
T ss_pred EEeeeEEEEEcCc--------eEEEcccccCCC
Confidence 9999999998532 346666777753
No 229
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=23.15 E-value=87 Score=27.25 Aligned_cols=28 Identities=32% Similarity=0.516 Sum_probs=22.4
Q ss_pred ceEEEEECCEEEEeecCCcCCCeEEEEc
Q 003049 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIG 282 (853)
Q Consensus 255 ~~v~V~R~g~~~~I~s~~LvpGDiV~l~ 282 (853)
..+.+.++|+.+.+.+++|.+||.|.+.
T Consensus 72 H~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 72 HLLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred CEEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 5667777777667889999999999764
No 230
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=22.89 E-value=5e+02 Score=27.47 Aligned_cols=90 Identities=9% Similarity=0.017 Sum_probs=64.2
Q ss_pred HHHHHHHHHhccceEEEEEeeeCCC--CChhh---------------------------hhhhcHHhhhcCcceeeEeee
Q 003049 621 YIETYKKYTHQGSRVLALAFKSLPD--MTVSD---------------------------ARSLHRDEVENGLTFAGFAVF 671 (853)
Q Consensus 621 ~~~~~~~~~~~G~rvlala~k~l~~--~~~~~---------------------------~~~~~r~~~E~dl~f~G~l~~ 671 (853)
.+...+.+...|..++-+|.|..+. ...+. ...+-||-...|+.=+=.+.=
T Consensus 22 ~~~~~~ai~aSg~~ivTva~rR~~~~~~~~~~~~~~i~~~~~~~lpNTaG~~ta~eAv~~a~lare~~~~~~iKlEVi~d 101 (248)
T cd04728 22 PAIMKEAIEASGAEIVTVALRRVNIGDPGGESFLDLLDKSGYTLLPNTAGCRTAEEAVRTARLAREALGTDWIKLEVIGD 101 (248)
T ss_pred HHHHHHHHHHhCCCEEEEEEEecccCCCCcchHHhhccccCCEECCCCCCCCCHHHHHHHHHHHHHHhCCCeEEEEEecC
Confidence 3444456677888888888887752 11000 012345656667666666666
Q ss_pred cCCCCcchHHHHHHHhhC---CCcEEEEcCCChhhHHHHHHH
Q 003049 672 NCPIREDSAKILSELKNS---SQDLAMITGDQALTACYVASQ 710 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~a---gi~v~miTGDn~~TA~~VA~~ 710 (853)
..-|-||..++|+.+++. |..|+=.+-|++.+|.+++.-
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 677899999999999999 999997888999999988864
No 231
>PRK04302 triosephosphate isomerase; Provisional
Probab=22.70 E-value=3.8e+02 Score=27.64 Aligned_cols=45 Identities=31% Similarity=0.464 Sum_probs=28.9
Q ss_pred eChhhHHHHHHHHHHc-CCEEEEEcCCcc---cHHHHHhCCc-eEEeccC
Q 003049 786 VAPEQKELILTTFKAV-GRMTLMCGDGTN---DVGALKQAHV-GVALLNA 830 (853)
Q Consensus 786 ~sP~qK~~iV~~Lq~~-g~~v~m~GDG~N---D~~ALk~AdV-GIAl~~~ 830 (853)
.+|++=.++++.+++. .....+.|=|+| |+..+.++++ |+.+|++
T Consensus 155 ~~~~~i~~~~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVGsa 204 (223)
T PRK04302 155 AKPEVVEDAVEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLASG 204 (223)
T ss_pred CCHHHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEehH
Confidence 4577777777777763 345567788885 4555555553 6777654
No 232
>PRK05015 aminopeptidase B; Provisional
Probab=22.66 E-value=62 Score=36.82 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=44.9
Q ss_pred ceEEEEECCEEEEeecCCcCCCeEEEEcCCC-----CCCCCCceeecceeeec----ceeEEeeccCCCCcc
Q 003049 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSS-----GQTGEDKSVPADMLILG----GSAIVNEAILTGEST 317 (853)
Q Consensus 255 ~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~-----~d~~~~~~vPaD~ill~----G~~~VdES~LTGES~ 317 (853)
.++..+--=-.-.|+..-.+|||||.-..|. ...++|+.|=||++... -+.+||=+.|||..+
T Consensus 235 ~nV~~il~~aENmisg~A~kpgDVIt~~nGkTVEI~NTDAEGRLVLAD~L~yA~~~~p~~IID~ATLTGA~~ 306 (424)
T PRK05015 235 KRVKLFLCCAENLISGNAFKLGDIITYRNGKTVEVMNTDAEGRLVLADGLIDASEQGPPLIIDAATLTGAAK 306 (424)
T ss_pred ceEEEEEEecccCCCCCCCCCCCEEEecCCcEEeeeccCccceeeehhHHHHhhhcCCCEEEEeeccchhhH
Confidence 3444443222335788899999999888764 11267889999998773 358999999999864
No 233
>PRK06846 putative deaminase; Validated
Probab=22.53 E-value=1.2e+03 Score=26.51 Aligned_cols=47 Identities=19% Similarity=0.123 Sum_probs=37.2
Q ss_pred EeeChhhHHHHHHHHHHcCCEEEE---EcCCcccHHHHHhCCceEEeccC
Q 003049 784 ARVAPEQKELILTTFKAVGRMTLM---CGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 784 Ar~sP~qK~~iV~~Lq~~g~~v~m---~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
+..+.++-..+++.+++.|-.|.- .|.|......|++|+|-+++|+.
T Consensus 262 ~~~~~~e~~~li~~la~~g~~v~~~~~~~~g~~p~~~l~~~Gv~v~lGtD 311 (410)
T PRK06846 262 GDLNEEEVEELAERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLGTD 311 (410)
T ss_pred hcCCHHHHHHHHHHHHHcCCeEEEeCCCCCCCCCHHHHHhCCCeEEEecC
Confidence 345666667778999999976654 38999999999999999999753
No 234
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=22.43 E-value=1.2e+02 Score=26.16 Aligned_cols=13 Identities=38% Similarity=0.424 Sum_probs=0.0
Q ss_pred CcCCCeEEEEcCC
Q 003049 272 DLVPGDVVSIGRS 284 (853)
Q Consensus 272 ~LvpGDiV~l~~g 284 (853)
+|+|||-|....|
T Consensus 36 ~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 36 SLKPGDEVVTIGG 48 (82)
T ss_dssp -------------
T ss_pred cCCCCCEEEECCc
Confidence 5666666665544
No 235
>PRK14898 DNA-directed RNA polymerase subunit A''; Provisional
Probab=22.40 E-value=69 Score=40.35 Aligned_cols=29 Identities=17% Similarity=0.399 Sum_probs=26.7
Q ss_pred ceEEEEECCEEEEeecCCcCCCeEEEEcC
Q 003049 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGR 283 (853)
Q Consensus 255 ~~v~V~R~g~~~~I~s~~LvpGDiV~l~~ 283 (853)
.++.|++||++..+.+++|.+||.|.+..
T Consensus 169 H~~~v~~~g~~~~~~a~~l~~GD~i~~~~ 197 (858)
T PRK14898 169 HSFVTRKDNEVIPVEGSELKIGDWLPVVR 197 (858)
T ss_pred CeEEEeeCCeEEEeeHHhCCCCCEEeeee
Confidence 67888999999999999999999998876
No 236
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=21.97 E-value=1.2e+02 Score=31.84 Aligned_cols=70 Identities=19% Similarity=0.199 Sum_probs=42.3
Q ss_pred HHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeE-----eeecC--CCCcch---HHH-HHHHhhCC
Q 003049 622 IETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGF-----AVFNC--PIREDS---AKI-LSELKNSS 690 (853)
Q Consensus 622 ~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~-----l~~~d--~lr~~a---~~~-I~~L~~ag 690 (853)
.+.++.+.++|.+|+-+.-|.-. .|+..+.+|.-.|+ +.|+. .-++++ |+. -+++.+.|
T Consensus 126 l~l~~~l~~~G~~Vf~lTGR~e~----------~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~G 195 (229)
T TIGR01675 126 LKLYQKIIELGIKIFLLSGRWEE----------LRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEG 195 (229)
T ss_pred HHHHHHHHHCCCEEEEEcCCChH----------HHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCC
Confidence 45677888999999988776421 12223333333443 33332 222222 333 33778899
Q ss_pred CcEEEEcCCCh
Q 003049 691 QDLAMITGDQA 701 (853)
Q Consensus 691 i~v~miTGDn~ 701 (853)
.+|++.-||+.
T Consensus 196 YrIv~~iGDq~ 206 (229)
T TIGR01675 196 YRIWGNIGDQW 206 (229)
T ss_pred ceEEEEECCCh
Confidence 99999999995
No 237
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=21.71 E-value=6.2e+02 Score=26.88 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=23.4
Q ss_pred HHHHHHHHHcCCEEEEEcCCcc---cHHHHHh--CCceEEeccC
Q 003049 792 ELILTTFKAVGRMTLMCGDGTN---DVGALKQ--AHVGVALLNA 830 (853)
Q Consensus 792 ~~iV~~Lq~~g~~v~m~GDG~N---D~~ALk~--AdVGIAl~~~ 830 (853)
...|+.+++.-..-.++|=|+| |+..+.. || |+-+|++
T Consensus 187 ~~~i~~lr~~~~~pi~vgfGI~~~e~~~~~~~~GAD-gvVvGSa 229 (256)
T TIGR00262 187 NELVKRLKAYSAKPVLVGFGISKPEQVKQAIDAGAD-GVIVGSA 229 (256)
T ss_pred HHHHHHHHhhcCCCEEEeCCCCCHHHHHHHHHcCCC-EEEECHH
Confidence 3455556554333467899998 6666554 56 6666654
No 238
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=21.25 E-value=3.3e+02 Score=26.77 Aligned_cols=84 Identities=10% Similarity=0.153 Sum_probs=50.6
Q ss_pred ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCc---EE
Q 003049 618 PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD---LA 694 (853)
Q Consensus 618 p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~---v~ 694 (853)
.+...+.++.+.++|+++..+.-+.- ......+. + ..++.+ .....||...-....+++.|++ ++
T Consensus 45 ~pgv~e~L~~Lk~~g~~l~I~Sn~~~----~~~~~~~~-~--~~gl~~-----~~~~~KP~p~~~~~~l~~~~~~~~~~l 112 (170)
T TIGR01668 45 YPALRDWIEELKAAGRKLLIVSNNAG----EQRAKAVE-K--ALGIPV-----LPHAVKPPGCAFRRAHPEMGLTSEQVA 112 (170)
T ss_pred ChhHHHHHHHHHHcCCEEEEEeCCch----HHHHHHHH-H--HcCCEE-----EcCCCCCChHHHHHHHHHcCCCHHHEE
Confidence 34566778888899988876654320 00001000 0 122222 2234577666556666777763 55
Q ss_pred EEcCCChhhHHHHHHHcCcC
Q 003049 695 MITGDQALTACYVASQVHIV 714 (853)
Q Consensus 695 miTGDn~~TA~~VA~~~gI~ 714 (853)
|| ||+..+-..-|+++|+.
T Consensus 113 ~I-GDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 113 VV-GDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-CCcchHHHHHHHHcCCe
Confidence 55 99999999999999995
No 239
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=21.09 E-value=6.4e+02 Score=25.28 Aligned_cols=90 Identities=12% Similarity=0.089 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecC--CCCcchHHHHHHHhhCCC---cE
Q 003049 619 SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC--PIREDSAKILSELKNSSQ---DL 693 (853)
Q Consensus 619 ~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d--~lr~~a~~~I~~L~~agi---~v 693 (853)
+...+.++.+.++|+++..+.-....... ......+..+.. -|-..+.-.+ ..||+..-....+++.|+ ++
T Consensus 97 ~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~--~~~~~~~~~l~~--~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 97 PSMMAAIKTLRAKGFKTACITNNFPTDHS--AEEALLPGDIMA--LFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred hhHHHHHHHHHHCCCeEEEEeCCCCccch--hhhHhhhhhhHh--hCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 44566778888899988776532211000 000011111111 1222222111 247777666666777776 48
Q ss_pred EEEcCCChhhHHHHHHHcCcC
Q 003049 694 AMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 694 ~miTGDn~~TA~~VA~~~gI~ 714 (853)
+|+ ||. ..-+.-|+++|+.
T Consensus 173 l~i-~D~-~~di~aA~~aG~~ 191 (211)
T TIGR02247 173 VFL-DDL-GSNLKPAAALGIT 191 (211)
T ss_pred EEE-cCC-HHHHHHHHHcCCE
Confidence 999 876 5578889999995
No 240
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=21.04 E-value=1.1e+02 Score=31.95 Aligned_cols=48 Identities=13% Similarity=0.120 Sum_probs=33.3
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEc---CCChhhHHHHHHH-cCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQ-VHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miT---GDn~~TA~~VA~~-~gI~ 714 (853)
|.+.-.+.+=|++.++|+.|++.|++++++| |..+......-++ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4444455566799999999999999999999 4444444433333 5663
No 241
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=21.02 E-value=2.1e+02 Score=23.73 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=23.8
Q ss_pred CceEEEEECCEEEEeec---CCcCCCeEEEEcCCC
Q 003049 254 NQTIMVHRCGKWVKLAG---TDLVPGDVVSIGRSS 285 (853)
Q Consensus 254 ~~~v~V~R~g~~~~I~s---~~LvpGDiV~l~~g~ 285 (853)
...+.|-.+|..++++. .++.|||.|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 35677888899888864 568899999999874
No 242
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=21.01 E-value=2.5e+02 Score=25.74 Aligned_cols=10 Identities=10% Similarity=0.099 Sum_probs=4.2
Q ss_pred HHHHHHHHhh
Q 003049 241 LKTLTEIRRV 250 (853)
Q Consensus 241 ~k~~~~l~~m 250 (853)
+|..++.++|
T Consensus 26 kKr~K~~~~m 35 (109)
T PRK05886 26 RKAMQATIDL 35 (109)
T ss_pred HHHHHHHHHH
Confidence 3334444444
No 243
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=21.00 E-value=2e+02 Score=31.04 Aligned_cols=44 Identities=18% Similarity=0.106 Sum_probs=34.0
Q ss_pred hcCcceeeEeeecCCCCcchHHHHHHHhhCCC-cEEEEcCCChhh
Q 003049 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQ-DLAMITGDQALT 703 (853)
Q Consensus 660 E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi-~v~miTGDn~~T 703 (853)
+.++..+--+...|.=|.+....+..++++|+ .+..+|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 45788888888888878888899999999999 589999998755
No 244
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=20.93 E-value=1.5e+02 Score=24.60 Aligned_cols=29 Identities=31% Similarity=0.485 Sum_probs=23.2
Q ss_pred CEEEEEcCC-cccHHHHHhCCc-eEEeccCC
Q 003049 803 RMTLMCGDG-TNDVGALKQAHV-GVALLNAV 831 (853)
Q Consensus 803 ~~v~m~GDG-~ND~~ALk~AdV-GIAl~~~~ 831 (853)
..++|+||. ..|..+=+++++ +|.+.+|.
T Consensus 22 ~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 22 SRCVMVGDSLETDIEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp GGEEEEESSTTTHHHHHHHTTSEEEEESSSS
T ss_pred HHEEEEcCCcHhHHHHHHHcCCcEEEECCCC
Confidence 469999999 999999999997 44444544
No 245
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=20.43 E-value=1.1e+02 Score=31.67 Aligned_cols=76 Identities=13% Similarity=0.253 Sum_probs=55.8
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
.-+...|++|+-++... + ..++-+.-.+.+-.++|+-.+...-.+..++.+++|++.|.++.++=|-++.+ .
T Consensus 110 ~~l~~~G~~Vi~LG~~v-p------~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG~~~~-~ 181 (213)
T cd02069 110 VILSNNGYEVIDLGVMV-P------IEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGGAATS-R 181 (213)
T ss_pred HHHHhCCCEEEECCCCC-C------HHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEEChhcC-H
Confidence 35677999999887532 1 22333344566778899988888999999999999999999877777777666 3
Q ss_pred HHHH
Q 003049 706 YVAS 709 (853)
Q Consensus 706 ~VA~ 709 (853)
..|+
T Consensus 182 ~~~~ 185 (213)
T cd02069 182 KHTA 185 (213)
T ss_pred HHHh
Confidence 3443
No 246
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=20.27 E-value=4.8e+02 Score=31.07 Aligned_cols=81 Identities=11% Similarity=0.149 Sum_probs=50.4
Q ss_pred hHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCC
Q 003049 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699 (853)
Q Consensus 620 ~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGD 699 (853)
++...+......+.++-.++|..+... ...+.+ -+ ++.+-- +.-.=..|+...|++|++.|+++++ ||
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~-~~~~~~----~l--~~~i~~---~~~~~~~e~~~~v~~lk~~G~~~vv--G~ 162 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPA-LVAFQK----TF--NLRIEQ---RSYVTEEDARGQINELKANGIEAVV--GA 162 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHH-HHHHHH----Hh--CCceEE---EEecCHHHHHHHHHHHHHCCCCEEE--cC
Confidence 344445555556678888888765421 111111 11 222222 2222357999999999999999998 88
Q ss_pred ChhhHHHHHHHcCcC
Q 003049 700 QALTACYVASQVHIV 714 (853)
Q Consensus 700 n~~TA~~VA~~~gI~ 714 (853)
. ++...|++.|+.
T Consensus 163 ~--~~~~~A~~~g~~ 175 (538)
T PRK15424 163 G--LITDLAEEAGMT 175 (538)
T ss_pred c--hHHHHHHHhCCc
Confidence 4 457999999986
No 247
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase, eukaryotic type. This protein is an FAD-containing flavoprotein.
Probab=20.26 E-value=3e+02 Score=29.74 Aligned_cols=43 Identities=12% Similarity=0.017 Sum_probs=34.6
Q ss_pred hcCcceeeEeeecCCCCcchHHHHHHHhhCCCc-EEEEcCCChh
Q 003049 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQD-LAMITGDQAL 702 (853)
Q Consensus 660 E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~-v~miTGDn~~ 702 (853)
+.++..+--+...|.-|.+..+.+..+.++|++ +..+|||.+.
T Consensus 57 ~~g~~~i~Hltcr~~~~~~l~~~L~~~~~~Gi~niLal~GD~p~ 100 (281)
T TIGR00677 57 VVGVETCMHLTCTNMPIEMIDDALERAYSNGIQNILALRGDPPH 100 (281)
T ss_pred hcCCCeeEEeccCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 336666777777777788888999999999995 7799999963
No 248
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.10 E-value=1.7e+02 Score=25.07 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=46.3
Q ss_pred CChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCC-CcchHHHHHHHhhCCCcEEE
Q 003049 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPI-REDSAKILSELKNSSQDLAM 695 (853)
Q Consensus 617 ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~l-r~~a~~~I~~L~~agi~v~m 695 (853)
.|..+.+.++.++ |.-+.-+.|...... .---.++++.+= +.+..++++.|+++|+++..
T Consensus 11 ~PG~L~~ll~~l~--~anI~~~~y~~~~~~-----------------~~~v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~ 71 (85)
T cd04906 11 RPGSFKKFCELIG--PRNITEFNYRYADEK-----------------DAHIFVGVSVANGAEELAELLEDLKSAGYEVVD 71 (85)
T ss_pred CCcHHHHHHHHhC--CCceeEEEEEccCCC-----------------eeEEEEEEEeCCcHHHHHHHHHHHHHCCCCeEE
Confidence 3555666666666 445556666543310 112346677766 78899999999999999876
Q ss_pred EcCCChhhHHHHH
Q 003049 696 ITGDQALTACYVA 708 (853)
Q Consensus 696 iTGDn~~TA~~VA 708 (853)
..||+.+..|+.
T Consensus 72 -~~~~~~~~~~l~ 83 (85)
T cd04906 72 -LSDDELAKTHLR 83 (85)
T ss_pred -CCCCHHHHHHhh
Confidence 556666655543
No 249
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=20.06 E-value=1.3e+02 Score=31.53 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=33.6
Q ss_pred HHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 680 AKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 680 ~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++|+++|+.|+=++-|...+-+..-+++||..
T Consensus 199 ~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 199 KNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 568999999999999999999999999999999974
Done!