BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003050
(853 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/818 (48%), Positives = 557/818 (68%), Gaps = 29/818 (3%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKNG-KSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGKL +L+ S G + +K+ F + G PG
Sbjct: 55 GRSVSLQLISATKAD-ANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPG 113
Query: 109 AFVIENQHKYKFFLQAATLH-APDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL + TL P++ +IHF C SW+Y KL K+ RIFF+N++YLPSETP
Sbjct: 114 AFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETP 173
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL +LRGDGTGERKEWERIYDYD YNDLGDPD G +ARPVLGG+++ PYP
Sbjct: 174 APLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYP 233
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR R D ++ESR D+Y+P DE F K S+F+ +++ ++P
Sbjct: 234 RRGRTGRKPTRKDPNSESRSN----DVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQ 289
Query: 288 SLLEKD---PHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMR 344
S + + F SFDE+ G++S T + K+ P + K+I R ++
Sbjct: 290 SAFDLNFTPREFDSFDEVHGLYSGGIKLP-----TDIISKISPLPVLKEIFRTDGEQALK 344
Query: 345 FPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLA 398
FP P++I + AW DEEF R+MLAG+NP IRCL+ FPP+ K S IT
Sbjct: 345 FPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKE 404
Query: 399 DIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKP 458
+E +L+GL + +A+ R+++LDHHD +MP+L RIN +S AYA+RT+LFL++D TL+P
Sbjct: 405 HLEPNLEGLTVDEAIQNKRLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRP 464
Query: 459 VAIELSLPSISSDE---VNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHA 515
+AIELSLP D+ ++VFLPA EG+E+++W LAKA+V+ NDS YHQLV+HWL+THA
Sbjct: 465 LAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHA 524
Query: 516 VVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICME 575
VVEPF+IAT R LSV+HP+++LL PH++DTM++N LAR L+N GG++E+T G+ +E
Sbjct: 525 VVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVE 584
Query: 576 LSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWV 635
+S+ +YK+W F +QALP DLIKR +A+ED P G +++ +DYPY +DGL++W AI TWV
Sbjct: 585 MSAVVYKDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWV 644
Query: 636 KDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWT 695
+Y ++YK DD+++ D E+QA WKE+ EVGHGDK+N WW +M +R+ L++A I+IWT
Sbjct: 645 HEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWT 704
Query: 696 SSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAIT 755
+SALHA+VNFGQY Y NRPTL R+F+P++G+ E+ EL + K YLK + +F
Sbjct: 705 ASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTL 764
Query: 756 LSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARL 815
+ +++E+LSRH SDEVYLG+R + WT D L F+ FG KL +IE K++ERN + +L
Sbjct: 765 IDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKL 824
Query: 816 KNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
+NR GP ++ Y L+ P + G+T +GIPNSISI
Sbjct: 825 RNRCGPVQMPYTLLLPSSKE-----GLTFRGIPNSISI 857
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/818 (48%), Positives = 555/818 (67%), Gaps = 29/818 (3%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKNG-KSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGKL +L+ S G + +K+ F + G PG
Sbjct: 55 GRSVSLQLISATKAD-ANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPG 113
Query: 109 AFVIENQHKYKFFLQAATLH-APDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL + TL P++ +IHF C SW+Y KL K+ RIFF+N++YLPSETP
Sbjct: 114 AFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETP 173
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL +LRGDGTGERKEWERIYDYD YNDLGDPD G +ARPVLGG+++ PYP
Sbjct: 174 APLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYP 233
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR R D ++ESR D+Y+P DE F K S+F+ +++ ++P
Sbjct: 234 RRGRTGRKPTRKDPNSESRSN----DVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQ 289
Query: 288 SLLEKD---PHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMR 344
S + + F SFDE+ G++S T + K+ P + K+I R ++
Sbjct: 290 SAFDLNFTPREFDSFDEVHGLYSGGIKLP-----TDIISKISPLPVLKEIFRTDGEQALK 344
Query: 345 FPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLA 398
FP P++I + AW DEEF R+MLAG+NP IRCL+ FPP+ K S IT
Sbjct: 345 FPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKE 404
Query: 399 DIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKP 458
+E +L+GL + +A+ R+++LDHHD +MP+L RIN +S AYA+RT+LFL++D TL+P
Sbjct: 405 HLEPNLEGLTVDEAIQNKRLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRP 464
Query: 459 VAIELSLPSISSDE---VNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHA 515
+AIELSLP D+ ++VFLPA EG+E+++W LAKA+V+ NDS YHQLV+H L+THA
Sbjct: 465 LAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHA 524
Query: 516 VVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICME 575
VVEPF+IAT R LSV+HP+++LL PH++DTM++N LAR +N GG++E+T G+ +E
Sbjct: 525 VVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVE 584
Query: 576 LSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWV 635
+S+ +YK+W F +QALP DLIKR +A+ED P G +++ +DYPY +DGL++W AI TWV
Sbjct: 585 MSAVVYKDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWV 644
Query: 636 KDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWT 695
+Y ++YK DD+++ D E+QA WKE+ EVGHGDK+N WW +M +R+ L++A I+IWT
Sbjct: 645 HEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWT 704
Query: 696 SSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAIT 755
+SALHA+VNFGQY Y NRPTL R+F+P++G+ E+ EL + K YLK + +F
Sbjct: 705 ASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTL 764
Query: 756 LSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARL 815
+ +++E+LSRH SDEVYLG+R + WT D L F+ FG KL +IE K++ERN + +L
Sbjct: 765 IDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKL 824
Query: 816 KNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
+NR GP ++ Y L+ P + G+T +GIPNSISI
Sbjct: 825 RNRCGPVQMPYTLLLPSSKE-----GLTFRGIPNSISI 857
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/818 (45%), Positives = 539/818 (65%), Gaps = 35/818 (4%)
Query: 52 SASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNGTKTTTYKLKFYVEPDFGNPGAFV 111
S S+Q+ S TK D GKGK+ L+ + G K Y +F + DFG PGAF
Sbjct: 55 SISIQLISATKAD--GGKGKVGKATNLRGKITLPTIGAKEEAYDAQFDWDSDFGIPGAFY 112
Query: 112 IENQHKYKFFLQAATLH-APDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETPSTL 170
I+N + +F+L++ L P++ IHF C SWVY K KT RIFF+N +YLPSETP+ L
Sbjct: 113 IKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPSETPAPL 172
Query: 171 KDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRG 230
R++EL ++RGDGTGERKEW+RIYDYD YNDLGDPD G + ARPVLGGS +LPYPRRG
Sbjct: 173 VKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGS-ALPYPRRG 231
Query: 231 RTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN--- 287
RTGR K R D ++E +P +Y+P DE F K S+F+ I++ ++P
Sbjct: 232 RTGRGKTRKDPNSE-KPGDF---VYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAF 287
Query: 288 --SLLEKDPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMRF 345
+LL D F +F E+R ++ + T L + P + K++ R +++
Sbjct: 288 DGNLLSLD--FDNFAEVRKLYEGGVTLP-----TNFLSNITPIPIIKELFRTDGEQFLKY 340
Query: 346 PEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLAD 399
P P+++ + AW DEEF R+ +AG+NP I+ +E FP K IT
Sbjct: 341 PPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITKEH 400
Query: 400 IEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPV 459
+E +L GL + QA+ +++ILDHHDYL+P+L +IN ++ YA+RT+ FL++D TL P+
Sbjct: 401 LEPNLGGLTVEQAIQNKKLFILDHHDYLIPYLRKINANTTKTYATRTIFFLKNDGTLTPL 460
Query: 460 AIELSLPSISSDE---VNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAV 516
AIELS P +E V+ V++P+ EG+EA +W LAKA+V+ ND+ YHQ+++HWL+THAV
Sbjct: 461 AIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAV 520
Query: 517 VEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICMEL 576
VEPFVIAT R LSV+HP+++LL PH++DTM++N+LAR L+NA GI+EKT G+ +E+
Sbjct: 521 VEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEM 580
Query: 577 SSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVK 636
S+ +YK+W F +QALP DL+KR +A++D P G ++L +DYPY DGL++W AI +WV+
Sbjct: 581 SAVIYKDWVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVE 640
Query: 637 DYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTS 696
+Y S +YK D+ ++ D E+QAWWKE+ EVGHGD ++ WW +M +R+ L++A LIW +
Sbjct: 641 EYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIA 700
Query: 697 SALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITL 756
SALHA+VNFGQY Y NRPT+ R+F+P++G+ E+ L + +K +LK + + +
Sbjct: 701 SALHAAVNFGQYPYGGLILNRPTISRRFMPEKGSPEYDALAKNPEKEFLKTITGKKETLI 760
Query: 757 STALVEVLSRHTSDEVYLGQRQSSE-WTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARL 815
++E+LSRH SDE YLGQR + WT D L F+ FG+ L+EIE+K+ E+N + L
Sbjct: 761 DLTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETL 820
Query: 816 KNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
+NR+GPAK+ Y L++P + G+T +GIPNSISI
Sbjct: 821 RNRYGPAKMPYTLLYPSSEE-----GLTFRGIPNSISI 853
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/821 (45%), Positives = 531/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L + R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GILE T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGILETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/821 (45%), Positives = 531/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L + R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/821 (45%), Positives = 531/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L + R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIVETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/821 (45%), Positives = 530/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/821 (45%), Positives = 530/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L + R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/821 (45%), Positives = 530/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L + R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIGETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/821 (45%), Positives = 530/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFG+Y Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGEYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/821 (45%), Positives = 530/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YH+L++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHELMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/821 (45%), Positives = 530/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+V+FGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVHFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/821 (45%), Positives = 529/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFG Y Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGNYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/821 (45%), Positives = 529/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+V FGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVGFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/821 (45%), Positives = 529/821 (64%), Gaps = 35/821 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S TK D GKGK+ +L+ S G + + + F + G PG
Sbjct: 37 GRSVSLQLISATKAD-AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLHAPDNQA-IHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL A NQ I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SL--LEKDP-HFRSFDEIRGMFSSNKS--RKVEGWLTKKLQKLLPEQLFKQITRASKGDP 342
S L+ P F SF ++ ++ R V + ++P + K++ R
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV-------ISTIIPLPVIKELYRTDGQHI 324
Query: 343 MRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK-----NGKMSSITL 397
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK G SS
Sbjct: 325 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 384
Query: 398 ADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSDATL 456
AD LDG + +A+ R+++LD+HD MP++ +IN +S YA+RT+LFLR D TL
Sbjct: 385 AD-SLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 443
Query: 457 KPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHT 513
KPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YH L++HWL+T
Sbjct: 444 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHALMSHWLNT 503
Query: 514 HAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC 573
HA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K
Sbjct: 504 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYS 563
Query: 574 MELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMT 633
+E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI T
Sbjct: 564 VEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKT 623
Query: 634 WVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILI 693
WV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+I
Sbjct: 624 WVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIII 683
Query: 694 WTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFA 753
W +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 684 WIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLP 743
Query: 754 ITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNA 813
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 744 TLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 814 RLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P + + G+T +GIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/823 (44%), Positives = 526/823 (63%), Gaps = 40/823 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYL-KNGKSHKHNGTKTTTYKLKFYVEPDFGNPG 108
G++ S+Q+ S T+ D G+G GK+ YL K+ + G + + + F + FG PG
Sbjct: 63 GRNISMQLISATQTD-GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPG 121
Query: 109 AFVIENQHKYKFFLQAATLH-APDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N +FFL + L P++ I F C SWVY + K RIFF N +YLPS TP
Sbjct: 122 AFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATP 181
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L RK+E LRGDGTG+RK+++RIYDYD YNDLG+PD G + RP+LGG PYP
Sbjct: 182 APLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGG--DPRPILGGCSIYPYP 239
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
R RTGR + R D ++E E +YVP DE F K S+F+ I++ H +IP
Sbjct: 240 LRVRTGRERTRTDPNSEKPGE-----VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFK 294
Query: 288 S----LLEKDPHFRSFDEIRGMFSSNKSRKVEGWL---TKKLQKLLPEQLFKQITRASKG 340
S L F SF+++R ++ EG + T L ++ P K+I R
Sbjct: 295 SAIFQLRVTSSEFESFEDVRSLY--------EGGIKLPTDILSQISPLPALKEIFRTDGE 346
Query: 341 DPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSS 394
+ ++FP P + + DEEF R+++AG+NP IR L+ FPPK + S+
Sbjct: 347 NVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTST 406
Query: 395 ITLADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINT-SSVCAYASRTLLFLRSD 453
IT +E ++ G+ + +A++ R++ILD+ D +P+L+RIN+ + AYA+RT+LFL+ D
Sbjct: 407 ITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDD 466
Query: 454 ATLKPVAIELSLPSISSDEV---NRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHW 510
TLKP+AIELS P D + + V LPA EG+++ +W LAKAHV+ NDS YHQLV+HW
Sbjct: 467 GTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHW 526
Query: 511 LHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPG 570
L+THAV+EPF IAT R LSV+HP+++LL PH++DT+++N LAR L+NA GI+EK+ PG
Sbjct: 527 LNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPG 586
Query: 571 KICMELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLA 630
K +E+SS +YK W F QALP DL+KR LA+ED P G +++ +DYPY +DGL++W A
Sbjct: 587 KYSIEMSSSVYKNWVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDA 646
Query: 631 IMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALT 690
I TWV +Y S++Y D +V+ D E+QAWWKE E GHGD + WW + + ++LIQ+ +
Sbjct: 647 IKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCS 706
Query: 691 ILIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPE 750
I++WT+SALHA+VNFGQY Y NRPTL R+FIP EGT E+ E++ + K YL+ +
Sbjct: 707 IIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITP 766
Query: 751 RFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERN 810
+F + +++E+LSRH SDE+YLG+R++ WT D++ L F+ FG KL IE KI RN
Sbjct: 767 KFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARN 826
Query: 811 RNARLKNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
+ L+NR GP ++ Y L+H + G+T KGIPNSISI
Sbjct: 827 SDPSLRNRTGPVQLPYTLLHRSSEE-----GLTFKGIPNSISI 864
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 225/481 (46%), Gaps = 58/481 (12%)
Query: 358 WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDITQAMNQW 416
W ED FG Q L G NP + +A P +T + SLD G ++ + +
Sbjct: 599 WHEDRWFGYQFLNGANPVILTRCDALPSN------FPVTNEHVNASLDRGKNLDEEIKDG 652
Query: 417 RIYILDHH------DYLMPFLSRINTS------------SVCAYASRTLLFLRSDATLKP 458
IYI+D Y P L I CA A L ++ L P
Sbjct: 653 HIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA-APLALFYVNKLGHLMP 711
Query: 459 VAIELSLPSISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVE 518
+AI+++ N ++ P +E W +AK + +S +HQL TH L TH E
Sbjct: 712 IAIQINQ---EPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHLLRTHLTTE 766
Query: 519 PFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTL-FPGKICMELS 577
F ++T R L+ HP+ +LL PH + ++ + R L+ +GGI++++L G +
Sbjct: 767 SFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFM 826
Query: 578 SELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKD 637
+ +KE + LP L K+R + S LP + Y DGL +W AI T++ +
Sbjct: 827 EKCFKEVNLQDYHLPNAL-KKRGVDDPSKLPG--------FYYRDDGLALWEAIETFIGE 877
Query: 638 YCSIFYKDDDSVKSDEEIQAWWKEIRE------VGHGDKRNASWWFEMNSRDNLIQALTI 691
+IFYK+DD VK D EIQ+W ++ + GH D + SR+ L + LT
Sbjct: 878 IIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESREQLKEVLTS 934
Query: 692 LIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPER 751
L++T S HA+VNF Q + + PN P + R P + + + + L LP +
Sbjct: 935 LVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEATLQSI-------LSTLPSK 987
Query: 752 FAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNR 811
+ A V +L++ + DE YLG ++ W +D++ L F +KL++I +KI +RN
Sbjct: 988 SQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNE 1046
Query: 812 N 812
N
Sbjct: 1047 N 1047
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 226/484 (46%), Gaps = 58/484 (11%)
Query: 358 WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDITQAMNQW 416
W ED FG Q L G NP + +A P +T + SLD G ++ + +
Sbjct: 232 WHEDRWFGYQFLNGANPVILTRCDALPSN------FPVTNEHVNASLDRGKNLDEEIKDG 285
Query: 417 RIYILDHH------DYLMPFLSRINTS------------SVCAYASRTLLFLRSDATLKP 458
IYI+D Y P L I CA A L ++ L P
Sbjct: 286 HIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA-APLALFYVNKLGHLMP 344
Query: 459 VAIELSLPSISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVE 518
+AI+++ N ++ P +E W +AK + +S +HQL TH L TH E
Sbjct: 345 IAIQINQ---EPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHLLRTHLTTE 399
Query: 519 PFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTL-FPGKICMELS 577
F ++T R L+ HPV +LL PH + ++ + R L+ +GGI++++L G +
Sbjct: 400 SFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFM 459
Query: 578 SELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKD 637
+ +KE + LP L K+R + S LP + Y DGL +W AI T++ +
Sbjct: 460 EKCFKEVNLQDYHLPNAL-KKRGVDDPSKLPG--------FYYRDDGLALWEAIETFIGE 510
Query: 638 YCSIFYKDDDSVKSDEEIQAWWKEIRE------VGHGDKRNASWWFEMNSRDNLIQALTI 691
+IFYK+DD VK D EIQ+W ++ + GH D + SR+ L + LT
Sbjct: 511 IIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESREQLKEVLTS 567
Query: 692 LIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPER 751
L++T S HA+VNF Q + + PN P + R P + + + + L LP +
Sbjct: 568 LVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPPKKKGEATLQSI-------LSTLPSK 620
Query: 752 FAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNR 811
+ A V +L++ + DE YLG ++ W +D++ L F +KL++I +KI +RN
Sbjct: 621 SQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNE 679
Query: 812 NARL 815
N +
Sbjct: 680 NLEV 683
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 226/484 (46%), Gaps = 58/484 (11%)
Query: 358 WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDITQAMNQW 416
W ED FG Q L G NP + +A P +T + SLD G ++ + +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALPSN------FPVTNEHVNASLDRGKNLDEEIKDG 282
Query: 417 RIYILDHH------DYLMPFLSRINTS------------SVCAYASRTLLFLRSDATLKP 458
IYI+D Y P L I CA A L ++ L P
Sbjct: 283 HIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA-APLALFYVNKLGHLMP 341
Query: 459 VAIELSLPSISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVE 518
+AI+++ N ++ P +E W +AK + +S +HQL TH L TH E
Sbjct: 342 IAIQINQ---EPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHLLRTHLTTE 396
Query: 519 PFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTL-FPGKICMELS 577
F ++T R L+ HP+ +LL PH + ++ + R L+ +GGI++++L G +
Sbjct: 397 SFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFM 456
Query: 578 SELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKD 637
+ +KE + LP L K+R + S LP + Y DGL +W AI T++ +
Sbjct: 457 EKCFKEVNLQDYHLPNAL-KKRGVDDPSKLPG--------FYYRDDGLALWEAIETFIGE 507
Query: 638 YCSIFYKDDDSVKSDEEIQAWWKEIRE------VGHGDKRNASWWFEMNSRDNLIQALTI 691
+IFYK+DD VK D EIQ+W ++ + GH D + SR+ L + LT
Sbjct: 508 IIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESREQLKEVLTS 564
Query: 692 LIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPER 751
L++T S HA+VNF Q + + PN P + R P + + + + L LP +
Sbjct: 565 LVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEATLQSI-------LSTLPSK 617
Query: 752 FAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNR 811
+ A V +L++ + DE YLG ++ W +D++ L F +KL++I +KI +RN
Sbjct: 618 SQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNE 676
Query: 812 NARL 815
N +
Sbjct: 677 NLEV 680
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 225/484 (46%), Gaps = 58/484 (11%)
Query: 358 WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDITQAMNQW 416
W ED FG Q L G NP + +A P +T + SLD G ++ + +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALPSN------FPVTNEHVNASLDRGKNLDEEIKDG 282
Query: 417 RIYILDHH------DYLMPFLSRINTS------------SVCAYASRTLLFLRSDATLKP 458
IYI+D Y P L I CA A L ++ L P
Sbjct: 283 HIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA-APLALFYVNKLGHLMP 341
Query: 459 VAIELSLPSISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVE 518
+AI+++ N ++ P +E W +AK + +S +HQL TH L TH E
Sbjct: 342 IAIQINQ---EPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHLLRTHLTTE 396
Query: 519 PFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTL-FPGKICMELS 577
F ++T R L+ HP+ +LL PH + ++ + R L +GGI++++L G +
Sbjct: 397 SFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGGIVDQSLSLGGGGHVTFM 456
Query: 578 SELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKD 637
+ +KE + LP L K+R + S LP + Y DGL +W AI T++ +
Sbjct: 457 EKCFKEVNLQDYHLPNAL-KKRGVDDPSKLPG--------FYYRDDGLALWEAIETFIGE 507
Query: 638 YCSIFYKDDDSVKSDEEIQAWWKEIRE------VGHGDKRNASWWFEMNSRDNLIQALTI 691
+IFYK+DD VK D EIQ+W ++ + GH D + SR+ L + LT
Sbjct: 508 IIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESREQLKEVLTS 564
Query: 692 LIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPER 751
L++T S HA+VNF Q + + PN P + R P + + + + L LP +
Sbjct: 565 LVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEATLQSI-------LSTLPSK 617
Query: 752 FAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNR 811
+ A V +L++ + DE YLG ++ W +D++ L F +KL++I +KI +RN
Sbjct: 618 SQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNE 676
Query: 812 NARL 815
N +
Sbjct: 677 NLEV 680
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 225/484 (46%), Gaps = 58/484 (11%)
Query: 358 WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDITQAMNQW 416
W ED FG Q L G NP + +A P +T + SLD G ++ + +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALPSN------FPVTNEHVNASLDRGKNLDEEIKDG 282
Query: 417 RIYILDHH------DYLMPFLSRINTS------------SVCAYASRTLLFLRSDATLKP 458
IYI+D Y P L I CA A L ++ L P
Sbjct: 283 HIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA-APLALFYVNKLGHLMP 341
Query: 459 VAIELSLPSISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVE 518
+AI+++ N ++ P +E W +AK + +S +HQL TH L TH E
Sbjct: 342 IAIQINQ---EPGPENPIWTPHEENEHD--WMMAKFWLGVAESNFHQLNTHLLRTHLTTE 396
Query: 519 PFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTL-FPGKICMELS 577
F ++T R L+ HP+ +LL PH + ++ + R L +GGI++++L G +
Sbjct: 397 SFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGGIVDQSLSLGGGGHVTFM 456
Query: 578 SELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKD 637
+ +KE + LP L K+R + S LP + Y DGL +W AI T++ +
Sbjct: 457 EKCFKEVNLQDYHLPNAL-KKRGVDDPSKLPG--------FYYRDDGLALWEAIETFIGE 507
Query: 638 YCSIFYKDDDSVKSDEEIQAWWKEIRE------VGHGDKRNASWWFEMNSRDNLIQALTI 691
+IFYK+DD VK D EIQ+W ++ + GH D + SR+ L + LT
Sbjct: 508 IIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESREQLKEVLTS 564
Query: 692 LIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPER 751
L++T S HA+VNF Q + + PN P + R P + + + + L LP +
Sbjct: 565 LVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEATLQSI-------LSTLPSK 617
Query: 752 FAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNR 811
+ A V +L++ + DE YLG ++ W +D++ L F +KL++I +KI +RN
Sbjct: 618 SQAAKAIATVYILTKFSEDERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNE 676
Query: 812 NARL 815
N +
Sbjct: 677 NLEV 680
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 255/568 (44%), Gaps = 76/568 (13%)
Query: 299 FDEIRGM-FSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMRFPEPQIIANNDLA 357
FD +G+ F N S+ +E + F + ++S D F + + +N ++
Sbjct: 187 FDSEKGVDFVLNYSKAMENLFINR---------FMHMFQSSWNDFADFEKIFVKISNTIS 237
Query: 358 ------WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDIT 410
W+ED FG Q L G NP IR P K +T +E SL+ L +
Sbjct: 238 ERVMNHWQEDLMFGYQFLNGANPVLIRRCTELPEK------LPVTTEMVECSLERQLSLE 291
Query: 411 QAMNQWRIYILDHHDYLMPFLSRI--NTSSVCA--YASRTLLFLRSDATLKPVAIELSLP 466
Q + Q I+I+D L I N + C + + + L + K V I + L
Sbjct: 292 QEVQQGNIFIVD-----FELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLN 346
Query: 467 SISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRR 526
I DE N +FLP+ + W LAK V ++D HQ +TH L TH V E F IA R
Sbjct: 347 QIPGDE-NPIFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 527 QLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKT-LFPGKICMELSSELYKEWR 585
QL +HP+ +LL H + T+ +N AR L+ G+ +K G +++ K+
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLT 462
Query: 586 FDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKD 645
+ P + IK R D+P Y Y DGL VW AI T+ + I+Y+
Sbjct: 463 YASLCFP-EAIKARGMESKEDIPY--------YFYRDDGLLVWEAIRTFTAEVVDIYYEG 513
Query: 646 DDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNF 705
D V+ D E+Q + ++ G ++++ + + SR+ L + LT++I+T+SA HA+VNF
Sbjct: 514 DQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 573
Query: 706 GQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLS 765
GQY +A++ PN P R P E ++D+ LP+R V LS
Sbjct: 574 GQYDWASWIPNAPPTMRAPPPTAKGVVTIEQIVDT-------LPDRGRSCWHLGAVWALS 626
Query: 766 RHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARLKNRWGPAKIA 825
+ +E++LG + ++ V F + L+ I IAERN N +L
Sbjct: 627 QFQENELFLGMYPEEHFI-EKPVKEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 826 YKLMHPDTSNVKNDGGITGKGIPNSISI 853
Y + PD IPNS++I
Sbjct: 677 YYYLSPDR-------------IPNSVAI 691
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 255/568 (44%), Gaps = 76/568 (13%)
Query: 299 FDEIRGM-FSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMRFPEPQIIANNDLA 357
FD +G+ F N S+ +E + F + ++S D F + + +N ++
Sbjct: 187 FDSEKGVDFVLNYSKAMENLFINR---------FMHMFQSSWNDFADFEKIFVKISNTIS 237
Query: 358 ------WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDIT 410
W+ED FG Q L G NP IR P K +T +E SL+ L +
Sbjct: 238 ERVMNHWQEDLMFGYQFLNGANPVLIRRCTELPEK------LPVTTEMVECSLERQLSLE 291
Query: 411 QAMNQWRIYILDHHDYLMPFLSRI--NTSSVCA--YASRTLLFLRSDATLKPVAIELSLP 466
Q + Q I+I+D L I N + C + + + L + K V I + L
Sbjct: 292 QEVQQGNIFIVD-----FELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLN 346
Query: 467 SISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRR 526
I DE N +FLP+ + W LAK V ++D HQ +TH L TH V E F IA R
Sbjct: 347 QIPGDE-NPIFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 527 QLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKT-LFPGKICMELSSELYKEWR 585
QL +HP+ +LL H + T+ +N AR L+ G+ +K G +++ K+
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLT 462
Query: 586 FDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKD 645
+ P + IK R D+P Y Y DGL VW AI T+ + I+Y+
Sbjct: 463 YASLCFP-EAIKARGMESKEDIPY--------YFYRDDGLLVWEAIRTFTAEVVDIYYEG 513
Query: 646 DDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNF 705
D V+ D E+Q + ++ G ++++ + + SR+ L + LT++I+T+SA HA+VNF
Sbjct: 514 DQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 573
Query: 706 GQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLS 765
GQY +A++ PN P R P E ++D+ LP+R V LS
Sbjct: 574 GQYDWASWIPNAPPTMRAPPPTAKGVVTIEQIVDT-------LPDRGRSCWHLGAVWALS 626
Query: 766 RHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARLKNRWGPAKIA 825
+ +E++LG + ++ V F + L+ I IAERN N +L
Sbjct: 627 QFQENELFLGMYPEEHFI-EKPVKEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 826 YKLMHPDTSNVKNDGGITGKGIPNSISI 853
Y + PD IPNS++I
Sbjct: 677 YYYLDPDR-------------IPNSVAI 691
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 255/568 (44%), Gaps = 76/568 (13%)
Query: 299 FDEIRGM-FSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMRFPEPQIIANNDLA 357
FD +G+ F N S+ +E + F + ++S D F + + +N ++
Sbjct: 187 FDSEKGVDFVLNYSKAMENLFINR---------FMHMFQSSWNDFADFEKIFVKISNTIS 237
Query: 358 ------WKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLD-GLDIT 410
W+ED FG Q L G NP IR P K +T +E SL+ L +
Sbjct: 238 ERVMNHWQEDLMFGYQFLNGANPVLIRRCTELPEK------LPVTTEMVECSLERQLSLE 291
Query: 411 QAMNQWRIYILDHHDYLMPFLSRI--NTSSVCA--YASRTLLFLRSDATLKPVAIELSLP 466
Q + Q I+I+D L I N + C + + + L + K V I + L
Sbjct: 292 QEVQQGNIFIVD-----FELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLN 346
Query: 467 SISSDEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRR 526
I DE N +FLP+ + W LAK V ++D HQ +TH L TH V E F IA R
Sbjct: 347 QIPGDE-NPIFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 527 QLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKT-LFPGKICMELSSELYKEWR 585
QL +HP+ +LL H + T+ +N AR L+ G+ +K G +++ K+
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLT 462
Query: 586 FDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKD 645
+ P + IK R D+P Y Y DGL VW AI T+ + I+Y+
Sbjct: 463 YASLCFP-EAIKARGMESKEDIPY--------YFYRDDGLLVWEAIRTFTAEVVDIYYEG 513
Query: 646 DDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNF 705
D V+ D E+Q + ++ G ++++ + + SR+ L + LT++I+T+SA HA+VNF
Sbjct: 514 DQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 573
Query: 706 GQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLS 765
GQY +A++ PN P R P E ++D+ LP+R V LS
Sbjct: 574 GQYDWASWIPNAPPTMRAPPPTAKGVVTIEQIVDT-------LPDRGRSCWHLGAVWALS 626
Query: 766 RHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARLKNRWGPAKIA 825
+ +E++LG + ++ V F + L+ I IAERN N +L
Sbjct: 627 QFQENELFLGMYPEEHFI-EKPVKEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 826 YKLMHPDTSNVKNDGGITGKGIPNSISI 853
Y + PD IPNS++I
Sbjct: 677 YYYLAPDR-------------IPNSVAI 691
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 224/475 (47%), Gaps = 52/475 (10%)
Query: 358 WKEDEEFGRQMLAGINPTRIRCL----EAFPPKGKNGKMSSITLADIEGSLD-GLDITQA 412
W++D FG Q L G NP IR E FP K + +E LD G + +A
Sbjct: 251 WRDDVWFGSQFLNGSNPEVIRRCDKLPENFPVKNEM----------VEKLLDRGYTLEKA 300
Query: 413 MNQWRIYILDHHDYLMPFLSRINTSSVCAYASR--TLLFLRSDATLKPVAIELSLPSISS 470
M + I+I D+ ++ + ++T Y + L +L+++ + P+AI+L
Sbjct: 301 MKEGLIFITDYK--ILEGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLYQ---QP 355
Query: 471 DEVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSV 530
E N ++ P K+ W +AK + D+ YHQ++TH L H ++EP +++ R L
Sbjct: 356 GENNSIWTPLKD--TEWDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWRNLPS 413
Query: 531 MHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTL-FPGKICMELSSELYKEWRFDEQ 589
+HPV +LL PH K M +N L R+ L+ GG +K L G + L + Y+ FD
Sbjct: 414 VHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSVTFDSY 473
Query: 590 ALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSV 649
L KDL +R G L + Y Y D L +W I +V+D I+Y DDDSV
Sbjct: 474 DLVKDLRQR-----------GVDGLRKFY-YKDDALLLWNVIHQFVQDIIQIYYNDDDSV 521
Query: 650 KSDEEIQAWWKEIREVGH-----GDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVN 704
K D EIQ W +++ E G+ G + FE +R+ L+ LT++++T S HA+VN
Sbjct: 522 KKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFE--NREELVHFLTVVVFTCSCQHAAVN 579
Query: 705 FGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVL 764
F Q A + PN PTL R+ P E + ++++ S L + ++V L
Sbjct: 580 FSQMATYGFHPNSPTLMRQPPPTEKGKSNHKVIMAS-------LANKHQAVTMVSVVNAL 632
Query: 765 SRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARLKNRW 819
+ E +LG + + D +F L I ++I ERN+ W
Sbjct: 633 TTIYPTEKFLGDYADNLF-GDAAAHAAMAKFKSNLANITKQITERNQGMVSPYTW 686
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 218/490 (44%), Gaps = 52/490 (10%)
Query: 357 AWKEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLDGLDITQAMNQW 416
+WKED FG Q L G NP +R P + K A +E L G + +A
Sbjct: 132 SWKEDALFGYQFLNGTNPMLLRHSVELPARLKFPPGMEELQAQLEKELQGGTLFEA---- 187
Query: 417 RIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPVAIELSLPSISSDEVNRV 476
+LD + I +S +L L+ D L P+ I+L LP S + +
Sbjct: 188 DFSLLDGIKA-----NVILSSQQYLAVPLVMLKLQPDGKLLPMVIQLQLPREGS-PLPPL 241
Query: 477 FLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHR 536
FLP + +W LAK V ++D H+L +H L H + E +AT R L +HP+ +
Sbjct: 242 FLPTDPPM---VWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFK 298
Query: 537 LLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC-MELSSELYKEWRFDEQALPKDL 595
LL PHF+ TM +N AR+ L++ GI ++ + G +EL + P DL
Sbjct: 299 LLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALLTYSSFCPPDDL 358
Query: 596 IKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEI 655
R L +S Y D L +W I +V+ S+ YK D+SVK D E+
Sbjct: 359 ADRGLLGVESSF------------YAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFEL 406
Query: 656 QAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPP 715
QAW +E E+G ++ + + S++ L +T+ I+T + H+S + GQ + + P
Sbjct: 407 QAWCREFTEIGLLGAQDRGFPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVP 466
Query: 716 NRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLG 775
N P C +P T++ + + + LP +L ++ L R V LG
Sbjct: 467 NAP--CTMRLPPPTTKD------ATLETVMATLPNFHQASLQMSITWQLGRCQPTMVALG 518
Query: 776 QRQSSEWT--DDQEVLRKF-EEFGEKLKEIEQKIAERNRNARLKNRWGPAKIAYKLMHPD 832
Q + ++ + VL KF EE K+IE RNA+L + Y+ + P
Sbjct: 519 QHEEEYFSGPGPKAVLTKFREELAALDKDIEV------RNAKL-------ALPYEYLRP- 564
Query: 833 TSNVKNDGGI 842
S V+N I
Sbjct: 565 -SRVENSVAI 573
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 201/462 (43%), Gaps = 48/462 (10%)
Query: 357 AWKEDEEFGRQMLAGINPTRIRCLEAFP-----PKGKNGKMSSITLADIEGSLDGLDITQ 411
W++DE F Q L G NP +R + P P G + + GSL D
Sbjct: 67 CWQDDELFSYQFLNGANPMLLRRSTSLPSRLVLPSGMEELRAQLEKELQNGSLFEADFIL 126
Query: 412 AMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPVAIELSLPSISSD 471
I YL A +L + + L+P+ I++ S
Sbjct: 127 LDGIPANVIRGEKQYLA--------------APLVMLKMEPNGKLQPMVIQIQP-PNPSS 171
Query: 472 EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVM 531
+FLP+ + W LAK+ V +D H++ H L+TH V E +AT R L +
Sbjct: 172 PTPTLFLPSDPPLA---WLLAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGL 228
Query: 532 HPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC-MELSSELYKEWRFDEQA 590
HP+ + L PH + TM +N AR+ L++ GGI +K + G ++L + +
Sbjct: 229 HPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQLTYCSLC 288
Query: 591 LPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVK 650
P DL R L LP Y D L +W I +V+ +FY+ DD VK
Sbjct: 289 PPDDLADRGLL----GLPGAL--------YAHDALRLWEIIARYVEGIVHLFYQRDDIVK 336
Query: 651 SDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAY 710
D E+QAW +EI EVG ++ + S+ L LT+ ++T +A HA++N GQ +
Sbjct: 337 GDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDW 396
Query: 711 AAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSD 770
A+ PN P C +P T+E + + LP+ L A+ LSR D
Sbjct: 397 YAWVPNAP--CTMRMPPPTTKEDVTM-----ATVMGSLPDVRQACLQMAISWHLSRRQPD 449
Query: 771 EVYLGQRQSSEWT--DDQEVLRKFEEFGEKLKEIEQKIAERN 810
V LG + ++ + VL +F L+++E++I RN
Sbjct: 450 MVPLGHHKEKYFSGPKPKAVLNQFR---TDLEKLEKEITARN 488
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 203/460 (44%), Gaps = 45/460 (9%)
Query: 357 AWKEDEEFGRQMLAGINPTRIRCLEAFP-----PKGKNGKMSSITLADIEGSLDGLDITQ 411
+W+ED FG Q L G NP +R P P G + + G+L D
Sbjct: 221 SWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGMEELQAQLEKELKAGTLFEADFAL 280
Query: 412 AMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPVAIELSLPSISSD 471
N IL YL A +L L+ D L P+ I+L LP I S
Sbjct: 281 LDNIKANVILYCQQYLA--------------APLVMLKLQPDGKLMPMVIQLHLPKIGSS 326
Query: 472 EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVM 531
+FLP + +W LAK V ++D H+L +H L H + E F +AT R L +
Sbjct: 327 P-PPLFLPTDPPM---VWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCLPSI 382
Query: 532 HPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC-MELSSELYKEWRFDEQA 590
HPV +L+ PH + T+ +N AR+ L++ GI ++ + G ++L + +
Sbjct: 383 HPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFC 442
Query: 591 LPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVK 650
P DL R L +S Y D L +W I +V+ ++YK D++V+
Sbjct: 443 PPDDLADRGLLGVESSF------------YAQDALRLWEIISRYVQGIMGLYYKTDEAVR 490
Query: 651 SDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAY 710
D E+Q+W +EI E+G + + + S +T+ I+T + H+S++ GQ +
Sbjct: 491 DDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDW 550
Query: 711 AAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSD 770
+ PN P C +P T++ + + + LP +L ++V L R
Sbjct: 551 FTWVPNAP--CTMRLPPPTTKD------ATLETVMATLPNLHQSSLQMSIVWQLGRDQPI 602
Query: 771 EVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERN 810
V LGQ Q E+ E E+F E+L ++++I RN
Sbjct: 603 MVPLGQHQ-EEYFSGPEPRAVLEKFREELAIMDKEIEVRN 641
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 203/460 (44%), Gaps = 45/460 (9%)
Query: 357 AWKEDEEFGRQMLAGINPTRIRCLEAFP-----PKGKNGKMSSITLADIEGSLDGLDITQ 411
+W+ED FG Q L G NP +R P P G + + G+L D
Sbjct: 221 SWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGMEELQAQLEKELKAGTLFEADFAL 280
Query: 412 AMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPVAIELSLPSISSD 471
N IL YL A +L L+ D L P+ I+L LP I S
Sbjct: 281 LDNIKANVILYCQQYLA--------------APLVMLKLQPDGKLMPMVIQLHLPKIGSS 326
Query: 472 EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVM 531
+FLP + +W LAK V ++D H+L +H L H + E F +AT R L +
Sbjct: 327 P-PPLFLPTDPPM---VWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCLPSI 382
Query: 532 HPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKIC-MELSSELYKEWRFDEQA 590
HPV +L+ PH + T+ +N AR+ L++ GI ++ + G ++L + +
Sbjct: 383 HPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFC 442
Query: 591 LPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVK 650
P DL R L +S Y D L +W I +V+ ++YK D++V+
Sbjct: 443 PPDDLADRGLLGVESSF------------YAQDALRLWEIISRYVQGIMGLYYKTDEAVR 490
Query: 651 SDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAY 710
D E+Q+W +EI E+G + + + S +T+ I+T + H+S++ GQ +
Sbjct: 491 DDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDW 550
Query: 711 AAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSD 770
+ PN P C +P T++ + + + LP +L ++V L R
Sbjct: 551 FTWVPNAP--CTMRLPPPTTKD------ATLETVMATLPNLKQSSLQMSIVWQLGRDQPI 602
Query: 771 EVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERN 810
V LGQ Q E+ E E+F E+L ++++I RN
Sbjct: 603 MVPLGQHQ-EEYFSGPEPRAVLEKFREELAIMDKEIEVRN 641
>pdb|3ISX|A Chain A, Crystal Structure Of Endoglucanase (Tm1050) From
Thermotoga Maritima At 1.40 A Resolution
Length = 343
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 378 RCLEAFPPKGKNGKMSSITLADIEGSLDG--LDITQAMNQW-----RIYILDHH 424
+ EAF P G+ ++ SI L ++EG +DG +D + W + ILD H
Sbjct: 19 KLTEAFGPSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWKGSGEKKVILDAH 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,683,258
Number of Sequences: 62578
Number of extensions: 1237172
Number of successful extensions: 2842
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2634
Number of HSP's gapped (non-prelim): 41
length of query: 853
length of database: 14,973,337
effective HSP length: 107
effective length of query: 746
effective length of database: 8,277,491
effective search space: 6175008286
effective search space used: 6175008286
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)