Query 003050
Match_columns 853
No_of_seqs 284 out of 670
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 16:02:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003050.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003050hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 2E-261 5E-266 2244.5 72.8 813 27-853 77-918 (918)
2 PLN02337 lipoxygenase 100.0 1E-259 2E-264 2239.1 73.6 821 32-853 19-866 (866)
3 PLN02264 lipoxygenase 100.0 1E-259 2E-264 2230.5 70.6 813 28-853 81-919 (919)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 6E-203 1E-207 1760.3 33.1 656 167-831 1-666 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 2.2E-35 4.7E-40 285.5 12.9 123 32-158 1-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.2 8.6E-11 1.9E-15 108.6 10.6 83 52-145 20-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.9 3.9E-09 8.5E-14 97.9 9.2 93 51-156 17-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.9 3.7E-08 8E-13 92.6 13.1 94 49-155 17-115 (116)
9 cd02899 PLAT_SR Scavenger rece 98.5 4.1E-07 9E-12 85.9 9.0 78 51-145 19-98 (109)
10 cd01753 PLAT_LOX PLAT domain o 98.4 1.8E-06 4E-11 81.9 10.1 86 51-148 19-107 (113)
11 cd01756 PLAT_repeat PLAT/LH2 d 98.1 2.4E-05 5.2E-10 74.7 10.5 93 51-156 19-118 (120)
12 cd01754 PLAT_plant_stress PLAT 98.0 2.3E-05 5.1E-10 76.2 9.4 63 83-148 50-119 (129)
13 cd01752 PLAT_polycystin PLAT/L 97.9 6E-05 1.3E-09 72.1 10.0 86 51-148 19-109 (120)
14 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.5 0.00029 6.3E-09 67.3 7.4 47 102-148 50-100 (114)
15 KOG2080 Uncharacterized conser 25.7 28 0.00062 43.5 0.7 46 102-147 1020-1069(1295)
16 cd01755 PLAT_lipase PLAT/ LH2 25.6 2.8E+02 0.006 26.7 7.4 51 89-141 45-105 (120)
17 PF10474 DUF2451: Protein of u 25.0 48 0.001 35.8 2.3 24 632-661 178-201 (234)
18 PF06232 ATS3: Embryo-specific 24.9 2.8E+02 0.0061 27.5 7.2 53 91-146 65-117 (125)
19 PF10281 Ish1: Putative stress 23.4 1.3E+02 0.0027 23.3 3.7 31 651-690 5-35 (38)
20 PF12588 PSDC: Phophatidylseri 21.6 1.7E+02 0.0036 29.5 5.1 127 647-792 10-139 (141)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=2.2e-261 Score=2244.51 Aligned_cols=813 Identities=43% Similarity=0.765 Sum_probs=777.2
Q ss_pred cccceeEEEeEEEE--------------ECCCCCCCCCCceEEEEEeccccCCCCCCcccCcccccccccccCCCC-Cce
Q 003050 27 AQANHAIIKGKIVI--------------DHSPGQSGPGKSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNG-TKT 91 (853)
Q Consensus 27 ~~~~~~~~~~~~~~--------------~~d~~~~~~g~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~~-~~~ 91 (853)
+.++..+|||+||| .+|.++|++||+|+|||||++. |++||+||++ ++.|++|.++ ... +++
T Consensus 77 ~~~~~~~i~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~-~~~~g~gk~~-~~~l~~~~~~-~~~~~~~ 153 (918)
T PLN02305 77 KYAGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEI-DPVTGSGKSV-ESSVRGWLPK-PSNDPHI 153 (918)
T ss_pred hhccCCeEEEEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccc-cCCCCCcccc-cchhhccccC-CCCCCCc
Confidence 34456689999999 4688999999999999999985 4479999988 9999999976 334 667
Q ss_pred EEEEEEEecCCCCCCceEEEEEecCCCceeeeEEEEecCCCCeEEEEeccccccCCCCCcceeEecCcccccCCCChhhH
Q 003050 92 TTYKLKFYVEPDFGNPGAFVIENQHKYKFFLQAATLHAPDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETPSTLK 171 (853)
Q Consensus 92 ~~y~v~f~~~~~~G~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~Fpc~sWv~~~~~~~~~riff~~~~yLp~~tp~~L~ 171 (853)
++|+++|+||++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||+.++|+++||||+||+|||++||++|+
T Consensus 154 ~~~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~ 233 (918)
T PLN02305 154 VEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIK 233 (918)
T ss_pred eEEEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCccccCeeeeccccCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCC
Q 003050 172 DLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLSTESRPEKIN 251 (853)
Q Consensus 172 ~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~pd~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~~~~~~ 251 (853)
+|||+||++|||||+||||+||||||||+|||||+||++++++|||||||+ ||||||||||||||++||.+|||....
T Consensus 234 ~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~-~PYPRR~RTGR~~t~~Dp~~Esr~~~~- 311 (918)
T PLN02305 234 DLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEE-WPYPRRCRTGRPPTKKDPLCESRIEKP- 311 (918)
T ss_pred HHHHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCC-CCCCCcCcCCCCCCCCCCcccccccCC-
Confidence 999999999999999999999999999999999999999999999999988 999999999999999999999996432
Q ss_pred CccccCCCCCCCcccccchhhhhHHHHHhhhhHHHhhhhcC-CCCCCCHHHHHhhccCCCCcccchhhHHHHhhhchH--
Q 003050 252 LDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEANSLLEK-DPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPE-- 328 (853)
Q Consensus 252 ~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~-~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~p~-- 328 (853)
..+||||||+|+++|++||+++++|+++|.++|.|+++++. ..+|++|+||++||++|++||.. ..+.+++ +|+
T Consensus 312 ~~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~--~~~~~~~-~p~~~ 388 (918)
T PLN02305 312 HPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTE--EPKDIGL-NPFLG 388 (918)
T ss_pred CCcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCch--hhhhhhc-CCchH
Confidence 24799999999999999999999999999999999999887 78999999999999999999973 1134444 887
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCC------CCCCCCCchhhhhc
Q 003050 329 QLFKQITRASKGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLADIEG 402 (853)
Q Consensus 329 ~~~~~~~~~~~~~~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~------g~~~~~it~e~i~~ 402 (853)
+++|++ ++++|.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+ |+++|+||+|||+.
T Consensus 389 ~~~~~i-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~ 467 (918)
T PLN02305 389 NFMKQV-LSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIER 467 (918)
T ss_pred HHHHHh-hhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHh
Confidence 899999 67889999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred cCCCCcHHHHhhcCceEEecCCccccccccccCCCCCc-cccceeEEeecCCCceeeEEEEecCCCCCCC-CCCceecCC
Q 003050 403 SLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVC-AYASRTLLFLRSDATLKPVAIELSLPSISSD-EVNRVFLPA 480 (853)
Q Consensus 403 ~L~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~-~yAp~~Lffl~~dg~L~PIAIqL~~p~~~~~-~~~~VftP~ 480 (853)
.|+|+||+|||++|||||+||||++|||+.++|.+.++ .|||+||||++++|+|+||||||+++++.+. ..++||||+
T Consensus 468 ~L~G~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~ 547 (918)
T PLN02305 468 ELEGMTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHG 547 (918)
T ss_pred hcCCCcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCC
Confidence 99999999999999999999999999999999987765 9999999999999999999999999886544 457899998
Q ss_pred CCCCCchHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhHHHHHHhcccCCcCchhhcccccccccccchHHHHhhcccCC
Q 003050 481 KEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAG 560 (853)
Q Consensus 481 d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~g 560 (853)
+++++.|.|+||||||++||++|||+|+||++|||+|||||||||||||++|||||||.||||+||+||++||++|||+|
T Consensus 548 ~d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~g 627 (918)
T PLN02305 548 HDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGG 627 (918)
T ss_pred CCCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 77778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCchhHHHHHHHHHhc-cccCCCCCchHHHhcCCCCCCCCCCcccccCCCCCCcchhcHHHHHHHHHHHHHhh
Q 003050 561 GILEKTLFPGKICMELSSELYKE-WRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYC 639 (853)
Q Consensus 561 Giie~~~~~G~~~~elss~~y~~-w~f~~~~lP~DL~~RGv~~~D~~~p~gl~l~l~dYpYrdDgL~IW~AI~~~V~~yv 639 (853)
|+||++|++|+++|||++++|++ |+|++++||+||++|||+++|+++||||+|.|||||||+|||+||+||++||++||
T Consensus 628 Giie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV 707 (918)
T PLN02305 628 GIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYV 707 (918)
T ss_pred CceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHHHHHhhhccccccccccccccccccCCCCcc
Q 003050 640 SIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRPT 719 (853)
Q Consensus 640 ~~YY~sD~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~ 719 (853)
++||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|+
T Consensus 708 ~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~ 787 (918)
T PLN02305 708 DHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPT 787 (918)
T ss_pred HhhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCChHHHhhhhChHHHHHhhCCCHHHHHHHHHHHHhhccCCCCcccccCCCCC--CCCCcHHHHHHHHHHHH
Q 003050 720 LCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSS--EWTDDQEVLRKFEEFGE 797 (853)
Q Consensus 720 ~~r~p~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~ 797 (853)
+||++||++++.+|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||++.+. .|+.|+++++||++|++
T Consensus 788 ~~Rrp~P~~~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~ 867 (918)
T PLN02305 788 LMRKLIPQENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSA 867 (918)
T ss_pred hhcCCCCCCCCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999875 79999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCCCCcccccccccCCCCCCCCCCCCcCCccCccccC
Q 003050 798 KLKEIEQKIAERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853 (853)
Q Consensus 798 ~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~~~~~~s~~g~t~~~IPnSIsI 853 (853)
+|++||++|++||++++||||+||+++||+||+| +|++||||+||||||||
T Consensus 868 ~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P-----~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 868 RLEEIEKTINERNKDIRLKNRNGAGIPPYELLLP-----TSGPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHHHHHHHHHhCCccccccCCCCCCCccccCC-----CCCCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999 99999999999999998
No 2
>PLN02337 lipoxygenase
Probab=100.00 E-value=1.1e-259 Score=2239.13 Aligned_cols=821 Identities=52% Similarity=0.950 Sum_probs=789.6
Q ss_pred eEEEeEEEE--------------ECCCCCCCCCCceEEEEEeccccCCCCC-CcccCcccccccccccCCC-CCceEEEE
Q 003050 32 AIIKGKIVI--------------DHSPGQSGPGKSASVQIFSCTKVDPGTG-KGKLSHIAYLKNGKSHKHN-GTKTTTYK 95 (853)
Q Consensus 32 ~~~~~~~~~--------------~~d~~~~~~g~~v~lqlvs~~~~~~~~~-~gk~s~~~~l~~~~~~~~~-~~~~~~y~ 95 (853)
.+|||+||| .+|.++|++||+|+|||||++.+||+|| +||+++++.|++|.++.+. .+++++|+
T Consensus 19 ~~~~~~v~l~~k~~ld~~~~~~~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~~~y~ 98 (866)
T PLN02337 19 EKIKGTVVLMKKNVLDFNDFNASVLDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGESAFK 98 (866)
T ss_pred ceEEEEEEEEEecccchhhcccchhhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCceEEE
Confidence 389999999 4689999999999999999998888898 9999999999999986555 56678999
Q ss_pred EEEecCCCCCCceEEEEEecCCCceeeeEEEEecCC-CCeEEEEeccccccCCCCCcceeEecCcccccCCCChhhHHHH
Q 003050 96 LKFYVEPDFGNPGAFVIENQHKYKFFLQAATLHAPD-NQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETPSTLKDLR 174 (853)
Q Consensus 96 v~f~~~~~~G~pgai~v~n~~~~e~~l~~i~l~~~p-~~~~~Fpc~sWv~~~~~~~~~riff~~~~yLp~~tp~~L~~~R 174 (853)
|+|+||++||+||||+|+|.|++||||++|+|+++| +|+|||+||||||++++|+++||||+||+|||++||++|+++|
T Consensus 99 ~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~~~R 178 (866)
T PLN02337 99 VTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRPYR 178 (866)
T ss_pred EEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHHHHHHH
Confidence 999999999999999999999999999999999999 5999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCccccCeeeeccccCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCcc
Q 003050 175 KQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLSTESRPEKINLDI 254 (853)
Q Consensus 175 ~~EL~~lrg~g~g~r~~~driYdy~~yndlG~pd~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~ 254 (853)
|+||++|||||+||||+||||||||+|||||+||++++++|||||||++||||||||||||||++||.+|||..++...+
T Consensus 179 ~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~~~~~~~ 258 (866)
T PLN02337 179 EEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLPLLSLNI 258 (866)
T ss_pred HHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975533358
Q ss_pred ccCCCCCCCcccccchhhhhHHHHHhhhhHHHhhhhcC-CCCCCCHHHHHhhccCCCCcccchhhHHHHhhhchHHHHHH
Q 003050 255 YVPPDERFSPKKLSEFIGNSIRASLHFLIPEANSLLEK-DPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQ 333 (853)
Q Consensus 255 yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~-~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~p~~~~~~ 333 (853)
||||||+|+++|++||+++++|+++|.++|.|+++++. ..+|++|+||++||++|+++|..+ .++.+++.+|++++|+
T Consensus 259 yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~~g~~lp~~~-~~~~~~~~~p~~~~~~ 337 (866)
T PLN02337 259 YVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGP-LLEELRKNIPLEMLKE 337 (866)
T ss_pred ccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhhcCCCCCCch-HHHHhhhcChHHHHHH
Confidence 99999999999999999999999999999999999887 789999999999999999999864 4567888899999999
Q ss_pred HhhcCCCCCCCCCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCC------CCCCCCCchhhhhccCCCC
Q 003050 334 ITRASKGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLADIEGSLDGL 407 (853)
Q Consensus 334 ~~~~~~~~~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~------g~~~~~it~e~i~~~L~G~ 407 (853)
+++++++.++|||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+ |+++|+||+|||++.|+|+
T Consensus 338 ~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~v~~~L~g~ 417 (866)
T PLN02337 338 LLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEGL 417 (866)
T ss_pred HHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHHHHhccCCc
Confidence 9988999999999999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred cHHHHhhcCceEEecCCccccccccccCCCCCccccceeEEeecCCCceeeEEEEecCCCCCCC---CCCceecCCCCCC
Q 003050 408 DITQAMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPVAIELSLPSISSD---EVNRVFLPAKEGI 484 (853)
Q Consensus 408 tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~yAp~~Lffl~~dg~L~PIAIqL~~p~~~~~---~~~~VftP~d~~~ 484 (853)
||+|||++|||||+||||.+|||+.++|..++++|||+||||++++|+|+||||||++|++.++ +.++||||+++++
T Consensus 418 Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~VfTP~~~~~ 497 (866)
T PLN02337 418 TVQEALEKNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKVYTPAEDGV 497 (866)
T ss_pred cHHHHHHcCCEEEEecchhcCcccccccCCCCccccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCeECCCCCCC
Confidence 9999999999999999999999999999887789999999999999999999999998876533 5799999998777
Q ss_pred CchHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhHHHHHHhcccCCcCchhhcccccccccccchHHHHhhcccCCcccc
Q 003050 485 EAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILE 564 (853)
Q Consensus 485 ~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie 564 (853)
++|.|+||||||++||++|||+|+||++||+++|||||||+||||++|||||||.||||+||+||++||+.||++||++|
T Consensus 498 ~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiid 577 (866)
T PLN02337 498 EGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGILE 577 (866)
T ss_pred CcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHheeCCCCeee
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCchhHHHHHHHHHhccccCCCCCchHHHhcCCCCCCCCCCcccccCCCCCCcchhcHHHHHHHHHHHHHhhccccC
Q 003050 565 KTLFPGKICMELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYK 644 (853)
Q Consensus 565 ~~~~~G~~~~elss~~y~~w~f~~~~lP~DL~~RGv~~~D~~~p~gl~l~l~dYpYrdDgL~IW~AI~~~V~~yv~~YY~ 644 (853)
+++++|+++|||++++|++|+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++||++||+
T Consensus 578 ~~~~~g~~~~els~~~yk~w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~i~dYPYrdDGL~iW~AI~~~V~~yv~~YY~ 657 (866)
T PLN02337 578 STVFPGKYALEMSSVVYKNWNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETWVKEYCAFYYP 657 (866)
T ss_pred eeeccchhHHHHHHHHHhcCCcccccCHHHHHHcCCCccccccccccccccCCCcchhhHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHHHHHhhhccccccccccccccccccCCCCccccccc
Q 003050 645 DDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRPTLCRKF 724 (853)
Q Consensus 645 sD~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p 724 (853)
+|++|++|.|||+||+||+++|||++++++|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++
T Consensus 658 ~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfvPN~P~~~r~~ 737 (866)
T PLN02337 658 TDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRF 737 (866)
T ss_pred chHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHhhhhChHHHHHhhCCCHHHHHHHHHHHHhhccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 003050 725 IPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQ 804 (853)
Q Consensus 725 ~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~ 804 (853)
||++++.+|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||+|++..|+.|+++++|+++|+++|++||+
T Consensus 738 ~P~~~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yLG~~~~~~w~~d~~~~~a~~~F~~~L~eIe~ 817 (866)
T PLN02337 738 MPEPGTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLEAFKRFGERLVEIEN 817 (866)
T ss_pred CCCCCchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceeccCcCCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 99988899999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHhcccccccCCCCcccccccccCCCCCCCCCCCCcCCccCccccC
Q 003050 805 KIAERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853 (853)
Q Consensus 805 ~I~~RN~~~~lknr~g~~~~PY~~L~P~~~~~~s~~g~t~~~IPnSIsI 853 (853)
+|++||+++.+|||+||+++||+||+|+.|+.+.++||||+||||||||
T Consensus 818 ~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 818 RIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred HHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 9999999999999999999999999995444444999999999999998
No 3
>PLN02264 lipoxygenase
Probab=100.00 E-value=1.1e-259 Score=2230.46 Aligned_cols=813 Identities=42% Similarity=0.778 Sum_probs=777.2
Q ss_pred ccceeEEEeEEEE--------------ECCCCCCCCCCceEEEEEeccccCCCCCCcccCcccccccccccCCC-CCceE
Q 003050 28 QANHAIIKGKIVI--------------DHSPGQSGPGKSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHN-GTKTT 92 (853)
Q Consensus 28 ~~~~~~~~~~~~~--------------~~d~~~~~~g~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~-~~~~~ 92 (853)
.+-+++|||+||| .+|.++|++||+|+|||||++. |++||+||+|+++.|++|.++ .. .++++
T Consensus 81 ~~~~~~i~~~v~~~~~~~~~~~~~~~~~~D~~~~~~G~~v~lqLVSs~~-~~~tg~~~~~~~a~l~~~~~~-~~~~~~~~ 158 (919)
T PLN02264 81 KAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQV-DPKTKEPKKSKAAVLKDWSKK-SNIKAERV 158 (919)
T ss_pred cceEEEEEEEEEEEeccccchhhcccchhhHHHHHhCCeEEEEEEeccc-cCCCCCccCCCcchhcccccC-CCCCCCce
Confidence 4457889999999 4688999999999999999985 558999999999999999976 44 56678
Q ss_pred EEEEEEecCCCCCCceEEEEEecCCCceeeeEEEEecCCCCeEEEEeccccccCCCCCcceeEecCcccccCCCChhhHH
Q 003050 93 TYKLKFYVEPDFGNPGAFVIENQHKYKFFLQAATLHAPDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETPSTLKD 172 (853)
Q Consensus 93 ~y~v~f~~~~~~G~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~Fpc~sWv~~~~~~~~~riff~~~~yLp~~tp~~L~~ 172 (853)
+|+|+|+||++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||++++|+++||||+||+|||++||++|++
T Consensus 159 ~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~ 238 (919)
T PLN02264 159 HYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRA 238 (919)
T ss_pred EEEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCccccCeeeeccccCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCC
Q 003050 173 LRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLSTESRPEKINL 252 (853)
Q Consensus 173 ~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~pd~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~ 252 (853)
|||+||++|||||+||||+||||||||+|||||+||++++++|||||||+ ||||||||||||||++||.+|||..+. .
T Consensus 239 ~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~-~PYPRR~RTGR~~t~~dp~~Esr~~~~-~ 316 (919)
T PLN02264 239 LREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKK-IPYPRRCRTGRLPTDSDMMAESRVEKP-L 316 (919)
T ss_pred HHHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCC-CCCCCCCcCCCCCCCCCCcccccccCC-C
Confidence 99999999999999999999999999999999999999999999999987 999999999999999999999996532 2
Q ss_pred ccccCCCCCCCcccccchhhhhHHHHHhhhhHHHhhhhcCCCCCCCHHHHHhhccCCCCcccchhhHHHHhhhchH-HHH
Q 003050 253 DIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEANSLLEKDPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPE-QLF 331 (853)
Q Consensus 253 ~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~p~-~~~ 331 (853)
.+||||||+|+++|+++|+++++|+++|.++|.|+++++.. +|+||+||++||++|+++|.. +.+.+.+.+|+ +++
T Consensus 317 ~iYvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~-~F~~f~~i~~Ly~~g~~l~~~--~~~~~~~~~p~~~~~ 393 (919)
T PLN02264 317 PMYVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE-DFANFGEIDSLYKEGLLLKLG--FQDDIFKKFPLPKVV 393 (919)
T ss_pred ceeCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC-CCCCHHHHHHHHhcCCcCCcc--hhhhHhhcCChHHHH
Confidence 47999999999999999999999999999999999998766 999999999999999999873 22333344998 899
Q ss_pred HHHhhcCCCCCCCCCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCC------CCCCCCCchhhhhccCC
Q 003050 332 KQITRASKGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLADIEGSLD 405 (853)
Q Consensus 332 ~~~~~~~~~~~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~------g~~~~~it~e~i~~~L~ 405 (853)
|++ +++++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+ |+++|+||++||+..|+
T Consensus 394 ~~~-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~ 472 (919)
T PLN02264 394 TTL-QESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLD 472 (919)
T ss_pred HHh-hhcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccC
Confidence 998 67889999999999999999999999999999999999999999999999997 99999999999999999
Q ss_pred CCcHHHHhhcCceEEecCCccccccccccCCCCCc-cccceeEEeecCCCceeeEEEEecCCCCCCC-CCCceecCCCCC
Q 003050 406 GLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVC-AYASRTLLFLRSDATLKPVAIELSLPSISSD-EVNRVFLPAKEG 483 (853)
Q Consensus 406 G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~-~yAp~~Lffl~~dg~L~PIAIqL~~p~~~~~-~~~~VftP~d~~ 483 (853)
|+||+|||++|||||+||||++|||++++|.++++ .|||+||||++++|+|+||||||+++++.+. ..++||||++++
T Consensus 473 G~Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~~d~ 552 (919)
T PLN02264 473 GLSVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPVDA 552 (919)
T ss_pred CCcHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcceeECCCCCC
Confidence 99999999999999999999999999999988776 9999999999999999999999999986444 467999997767
Q ss_pred CCchHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhHHHHHHhcccCCcCchhhcccccccccccchHHHHhhcccCCccc
Q 003050 484 IEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGIL 563 (853)
Q Consensus 484 ~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGii 563 (853)
+++|.|+||||||++||++|||+|+||++||++||||||||+||||.+|||||||.||||+||+||++||++|||+||++
T Consensus 553 ~~~w~W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGii 632 (919)
T PLN02264 553 TSNWMWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVI 632 (919)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceE
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCchhHHHHHHHHHhc-cccCCCCCchHHHhcCCCCCCCCCCcccccCCCCCCcchhcHHHHHHHHHHHHHhhccc
Q 003050 564 EKTLFPGKICMELSSELYKE-WRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIF 642 (853)
Q Consensus 564 e~~~~~G~~~~elss~~y~~-w~f~~~~lP~DL~~RGv~~~D~~~p~gl~l~l~dYpYrdDgL~IW~AI~~~V~~yv~~Y 642 (853)
|++|++|+++|||++++|++ |+|++++||+||++|||+++|+++||||++.|||||||+|||+||+||++||++||++|
T Consensus 633 d~~f~pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv~~Y 712 (919)
T PLN02264 633 ESCFTAGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERY 712 (919)
T ss_pred EEeeccchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchhhccCCCcchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHHHHHhhhccccccccccccccccccCCCCccccc
Q 003050 643 YKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRPTLCR 722 (853)
Q Consensus 643 Y~sD~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~~r 722 (853)
|++|++|++|.|||+||+||++.||+++++++|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||
T Consensus 713 Y~~D~~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~r 792 (919)
T PLN02264 713 YPDPSLICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMR 792 (919)
T ss_pred CCChhhhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhhhhcCcccccccCCCCChHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCChHHHhhhhChHHHHHhhCCCHHHHHHHHHHHHhhccCCCCcccccCCCCC-CCCCcHHHHHHHHHHHHHHHH
Q 003050 723 KFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSS-EWTDDQEVLRKFEEFGEKLKE 801 (853)
Q Consensus 723 ~p~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~-~~~~d~~~~~a~~~F~~~L~~ 801 (853)
+|||++++++|++|..+|+++||++||++.||+.+|+++++||+|++||+|||++..+ .|+.|+++++||++|+++|++
T Consensus 793 rp~P~~~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~yLG~~~~~~~w~~D~~~~~af~rF~~~L~e 872 (919)
T PLN02264 793 RLIPDESDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFSAEIGR 872 (919)
T ss_pred CCCCCCCChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCceeccCCCCccccccCHHHHHHHHHHHHHHHH
Confidence 9999988899999999999999999999999999999999999999999999998755 799999999999999999999
Q ss_pred HHHHHHHHhcccccccCCCCcccccccccCCCCCCCCCCCCcCCccCccccC
Q 003050 802 IEQKIAERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853 (853)
Q Consensus 802 Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~~~~~~s~~g~t~~~IPnSIsI 853 (853)
||++|++||++++||||+||+++||+||+| +|++||||+||||||||
T Consensus 873 Ie~~I~~RN~~~~~knR~G~~~~PY~lL~P-----~s~~G~T~~gIPNSISI 919 (919)
T PLN02264 873 IEKEIEKRNADPSRRNRCGAGVLPYELLAP-----SSEPGVTCRGVPNSVSI 919 (919)
T ss_pred HHHHHHHHcCCccccccCCCCCCCceeeCC-----CCCCCCCcCCCCCcccC
Confidence 999999999999999999999999999999 99999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=5.9e-203 Score=1760.27 Aligned_cols=656 Identities=51% Similarity=0.900 Sum_probs=573.7
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCccccCeeeeccccCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003050 167 PSTLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLSTESR 246 (853)
Q Consensus 167 p~~L~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~pd~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~ 246 (853)
|.+|+++|++||++|||||+||||+||||||||||||||+||++++++|||||||++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccCCCCCCCcccccchhhhhHHHHHhhhhHHHhhhhcC-CCCCCCHHHHHhhccCCCCcccchhhHHHHhhh
Q 003050 247 PEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEANSLLEK-DPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKL 325 (853)
Q Consensus 247 ~~~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~-~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~ 325 (853)
+ .++||||||+|++.|+++|.++++||++|.++|.|++++.. ..+|+||+||++||++|+++|. +.+++.
T Consensus 81 ~----~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~~-----~~~~~~ 151 (667)
T PF00305_consen 81 S----GDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLPT-----DLLKKL 151 (667)
T ss_dssp -----SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE--H-----HHHCCH
T ss_pred c----ccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccchh-----hHhhhc
Confidence 4 37999999999999999999999999999999999998766 7899999999999999999884 356677
Q ss_pred chHHHHHHHhhcCCCCCCCCCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCC------CCCCCCCchhh
Q 003050 326 LPEQLFKQITRASKGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLAD 399 (853)
Q Consensus 326 ~p~~~~~~~~~~~~~~~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~------g~~~~~it~e~ 399 (853)
+|+++++++++++++.++|||+|+|++.++++|++|+|||||+|||+||++|+||++||++++ |+++++||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~ 231 (667)
T PF00305_consen 152 IPLELLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEH 231 (667)
T ss_dssp TTSTTCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHH
T ss_pred CcHHHHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHH
Confidence 899999999988999999999999999999999999999999999999999999999999996 89999999999
Q ss_pred hhccCCCCcHHHHhhcCceEEecCCccccccccccCCCCCccccceeEEeecCCCceeeEEEEecCCCCCCC-CCCceec
Q 003050 400 IEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPVAIELSLPSISSD-EVNRVFL 478 (853)
Q Consensus 400 i~~~L~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~yAp~~Lffl~~dg~L~PIAIqL~~p~~~~~-~~~~Vft 478 (853)
|+..|+|+||++||++|||||+|||++++|+++++|......|||+||||++++|+|+||||||++|++.+. ..++|||
T Consensus 232 i~~~l~g~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~t 311 (667)
T PF00305_consen 232 IEPQLEGLTLEEALKDGRLFILDYHDLFGPYLNKINEKGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFT 311 (667)
T ss_dssp HHHHCHCS-HHHHHHTT-EEEEEEGGGTTHHHHHHTTCCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-
T ss_pred hhhccCCCcHHHHHhcCCeEEEeehhhccccccccccCCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeee
Confidence 999999999999999999999999999999999999843449999999999999999999999998865332 3578999
Q ss_pred CCCCCCCchHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhHHHHHHhcccCCcCchhhcccccccccccchHHHHhhccc
Q 003050 479 PAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLN 558 (853)
Q Consensus 479 P~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~ 558 (853)
|+++++.+|.|+||||||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||+
T Consensus 312 P~~d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~ 391 (667)
T PF00305_consen 312 PSDDGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLIN 391 (667)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTSS
T ss_pred cCCCCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhhc
Confidence 99655567889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCchhHHHHHHHHHhccccCCCCCchHHHhcCCCCCCCCCCcccccCCCCCCcchhcHHHHHHHHHHHHHh
Q 003050 559 AGGILEKTLFPGKICMELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDY 638 (853)
Q Consensus 559 ~gGiie~~~~~G~~~~elss~~y~~w~f~~~~lP~DL~~RGv~~~D~~~p~gl~l~l~dYpYrdDgL~IW~AI~~~V~~y 638 (853)
+||+||++|++|+++|+|++++|++|+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++|
T Consensus 392 ~gG~id~~~~~g~~~~~l~~~~y~~~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~~ 471 (667)
T PF00305_consen 392 AGGIIDKTFSPGKYGMELSSRAYKNWRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSDY 471 (667)
T ss_dssp TTSHHHHHSTTTTTHHHHHHHHHTT--GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhHHHHHHHHHHhhCCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCccccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHHHHHhhhccccccccccccccccccCCCCc
Q 003050 639 CSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRP 718 (853)
Q Consensus 639 v~~YY~sD~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P 718 (853)
|++||++|++|++|.|||+||+||+++|||++++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+|
T Consensus 472 v~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~P 551 (667)
T PF00305_consen 472 VNLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNRP 551 (667)
T ss_dssp HHHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS-
T ss_pred hhhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCCC
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCChH--HHhhhhChHHHHHhhCCCHHHHHHHHHHHHhhccCCCCcccccCCCCCCCCCcHHHHHHHHHHH
Q 003050 719 TLCRKFIPDEGTQE--FAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFG 796 (853)
Q Consensus 719 ~~~r~p~P~~g~~~--~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~ 796 (853)
++||+++|.+++.+ |+++.++||+++|++||++.||+.+|+++++||+|++||+|||+|++.+|+.|+++++|+++|+
T Consensus 552 ~~~r~~~P~~~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~~~F~ 631 (667)
T PF00305_consen 552 TALRRPMPPPTTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAFERFQ 631 (667)
T ss_dssp S-BSSSS--TSSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHHHHHH
T ss_pred hhhcccCCCCCcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHHHHHH
Confidence 99999999877766 9999999999999999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCcccccccccC
Q 003050 797 EKLKEIEQKIAERNRNARLKNRWGPAKIAYKLMHP 831 (853)
Q Consensus 797 ~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P 831 (853)
++|++||++|++||+++++|||+|++++||+||+|
T Consensus 632 ~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~P 666 (667)
T PF00305_consen 632 EELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLP 666 (667)
T ss_dssp HHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSS
T ss_pred HHHHHHHHHHHHHhCCccccccCCCCCCCccccCC
Confidence 99999999999999999999999999999999999
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=2.2e-35 Score=285.49 Aligned_cols=123 Identities=34% Similarity=0.587 Sum_probs=112.2
Q ss_pred eEEEeEEEE-------------ECCCCCCCCCCceEEEEEeccccCCCCCCcccCcccccccccccCCCCCceEEEEEEE
Q 003050 32 AIIKGKIVI-------------DHSPGQSGPGKSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNGTKTTTYKLKF 98 (853)
Q Consensus 32 ~~~~~~~~~-------------~~d~~~~~~g~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~~~~~~~y~v~f 98 (853)
++|||+|+| .+|.++|++||+|+||||||+. ||+||+||+++++.|++|..+. +++++|+++|
T Consensus 1 ~~vka~V~v~~k~~~~~~~~~~~~D~~~~llGk~v~lqLVSs~~-d~~tg~~k~~~~~~l~~~~~~~---~~e~~y~~~F 76 (137)
T cd01751 1 VKVKATVTVMKKNKLDLNDDGSGLDDLDDLLGRSLLLELVSSEL-DPKTGKGKKGKAAFLEGWGKSL---AGESAYEAEF 76 (137)
T ss_pred CEEEEEEEEEEeeccccccccchhhhHHHhhCCeEEEEEEEeee-cCCCCCcccccceeeecccccC---CcceEEEEEE
Confidence 368888888 2588899999999999999985 5579999999999999998543 4567999999
Q ss_pred ecCCCCCCceEEEEEecCCCceeeeEEEEecCC-CCeEEEEeccccccCCCCCcceeEecC
Q 003050 99 YVEPDFGNPGAFVIENQHKYKFFLQAATLHAPD-NQAIHFDCRSWVYPIKLTKTPRIFFSN 158 (853)
Q Consensus 99 ~~~~~~G~pgai~v~n~~~~e~~l~~i~l~~~p-~~~~~Fpc~sWv~~~~~~~~~riff~~ 158 (853)
+||++||+||||+|+|.|++||||++|+|+++| .|++||+|||||||+++|+++||||+|
T Consensus 77 ~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 77 EVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 999999999999999999999999999999999 499999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.20 E-value=8.6e-11 Score=108.61 Aligned_cols=83 Identities=36% Similarity=0.636 Sum_probs=62.8
Q ss_pred ceEEEEEeccccCCCCCCcccCcccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEecC-CCceeeeEEEEecC
Q 003050 52 SASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQH-KYKFFLQAATLHAP 130 (853)
Q Consensus 52 ~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~-~~e~~l~~i~l~~~ 130 (853)
+|.|+|++++ .| +| .+....++.|. |+ .+. .|+..|.++.++|++++|.|++++ ..+|||++|+|++.
T Consensus 20 ~V~l~L~g~~-~~--s~---~~~~~~~~~~~--f~-~g~--~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~ 88 (105)
T smart00308 20 SVSLSLVGAE-GD--GK---ESKLDYLFKGI--FA-RGS--TYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDL 88 (105)
T ss_pred eEEEEEEeCC-CC--Cc---ceeccccCCcc--cc-CCc--eEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEEC
Confidence 6999999865 23 22 23344555543 54 333 444555588999999999999999 89999999999876
Q ss_pred C-CCeEEEEecccccc
Q 003050 131 D-NQAIHFDCRSWVYP 145 (853)
Q Consensus 131 p-~~~~~Fpc~sWv~~ 145 (853)
+ +..++|+||+||++
T Consensus 89 ~~~~~~~F~c~~Wl~~ 104 (105)
T smart00308 89 PTGGKYHFPCNSWVYP 104 (105)
T ss_pred CCCCEEEEEcCceeCC
Confidence 6 67899999999986
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.93 E-value=3.9e-09 Score=97.95 Aligned_cols=93 Identities=22% Similarity=0.417 Sum_probs=70.2
Q ss_pred CceEEEEEeccccCCCCCCcccCcccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEec---CCCceeeeEEEE
Q 003050 51 KSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQ---HKYKFFLQAATL 127 (853)
Q Consensus 51 ~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~---~~~e~~l~~i~l 127 (853)
..|.++|+.+. |+.+....++.+... .+...+|.++ .+.++|+|.+|.|.++ +...|||++|+|
T Consensus 17 ~~V~i~l~G~~--------g~s~~~~l~~~~~~~---~g~~d~F~i~--~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V 83 (113)
T PF01477_consen 17 ANVYITLYGSK--------GKSGEIELLDPSGFN---FGSTDTFTIE--TPEDLGEIQKIRIWHDGSGPSPSWYLDSVVV 83 (113)
T ss_dssp SEEEEEEEETT--------EEEEEEEEEEEEETS---TTEEEEEEEE--ESSCGCSEEEEEEEEESSSSSSEEEEEEEEE
T ss_pred CeEEEEEEECC--------CCcceEEEeeeeecc---cCceEEeeee--ecccCCCCcEEEEEEccCCCccceEEEEEEE
Confidence 45888888632 232223333333321 1445677666 5679999999999999 788999999999
Q ss_pred ecCC-CCeEEEEeccccccCCCCCcceeEe
Q 003050 128 HAPD-NQAIHFDCRSWVYPIKLTKTPRIFF 156 (853)
Q Consensus 128 ~~~p-~~~~~Fpc~sWv~~~~~~~~~riff 156 (853)
...+ +..+.|+||+||....+++.+|+||
T Consensus 84 ~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 84 TDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred EeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 8766 6689999999999999999999997
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.85 E-value=3.7e-08 Score=92.59 Aligned_cols=94 Identities=16% Similarity=0.250 Sum_probs=69.4
Q ss_pred CCCceEEEEEeccccCCCCCCcccCcccccc-cccccCCCCCceEEEEEEEecCCCCCCceEEEEEecCCC---ceeeeE
Q 003050 49 PGKSASVQIFSCTKVDPGTGKGKLSHIAYLK-NGKSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQHKY---KFFLQA 124 (853)
Q Consensus 49 ~g~~v~lqlvs~~~~~~~~~~gk~s~~~~l~-~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~~~---e~~l~~ 124 (853)
..-+|.|+|+.+. |. +....|. .+.. |+ .+...+|.++ .+.++|++.+|.|++++.. +|||++
T Consensus 17 T~~~v~i~l~g~~--------g~-s~~~~l~~~~~~-f~-~g~~~~f~v~--~~~~lG~i~~v~l~~d~~g~~~~W~l~~ 83 (116)
T cd00113 17 TDSNISLALYGEN--------GN-SSDIPILDGPGS-FE-RGSTDTFQID--LKLDIGDITKVYLRRDGSGLSDGWYCES 83 (116)
T ss_pred ccCEEEEEEEeCC--------CC-cccEEccCCCCc-cc-CCCceEEEEe--ccCCCcCeEEEEEEECCCCCCCCEEEeE
Confidence 3457999999642 11 1223333 3322 55 3445667665 6689999999999998765 999999
Q ss_pred EEEecCC-CCeEEEEeccccccCCCCCcceeE
Q 003050 125 ATLHAPD-NQAIHFDCRSWVYPIKLTKTPRIF 155 (853)
Q Consensus 125 i~l~~~p-~~~~~Fpc~sWv~~~~~~~~~rif 155 (853)
|+|.+.. +..++|+||+||.....++.+|+|
T Consensus 84 V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~ 115 (116)
T cd00113 84 ITVQALGTKKVYTFPVNRWVLGGKWYTSVRSL 115 (116)
T ss_pred EEEEeCCCCCEEEEEeCCCcccCCCCCceeec
Confidence 9998776 578999999999998888888876
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.51 E-value=4.1e-07 Score=85.89 Aligned_cols=78 Identities=9% Similarity=0.268 Sum_probs=59.0
Q ss_pred CceEEEEEeccccCCCCCCcccCcccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEecC-CCceeeeEEEEec
Q 003050 51 KSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQH-KYKFFLQAATLHA 129 (853)
Q Consensus 51 ~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~-~~e~~l~~i~l~~ 129 (853)
.+|.|+||.++ .+ ++ +..|++ +|+ .+.+++|.|+ ++++|++-.|.|.|.. .+.|||+.|+|.+
T Consensus 19 ~~V~i~L~G~~-g~--S~------~~~L~~---~F~-~G~~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~ 82 (109)
T cd02899 19 GTIEITLLGSS-GR--SN------PKTLSQ---GFY-PGSLKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIKS 82 (109)
T ss_pred ceEEEEEEECC-CC--cC------CEEccC---ccC-CCceEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEEC
Confidence 36999999753 11 22 233443 365 4557889777 5899999999998875 5689999999986
Q ss_pred CC-CCeEEEEecccccc
Q 003050 130 PD-NQAIHFDCRSWVYP 145 (853)
Q Consensus 130 ~p-~~~~~Fpc~sWv~~ 145 (853)
| +..++||||+|+..
T Consensus 83 -~~g~~~~Fpc~rWla~ 98 (109)
T cd02899 83 -EDGKVFAFNVKRWIGY 98 (109)
T ss_pred -CCCCEEEEEcceeeCC
Confidence 6 66899999999974
No 10
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=98.39 E-value=1.8e-06 Score=81.90 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=64.2
Q ss_pred CceEEEEEeccccCCCCCCcccCcccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEecC---CCceeeeEEEE
Q 003050 51 KSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQH---KYKFFLQAATL 127 (853)
Q Consensus 51 ~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~---~~e~~l~~i~l 127 (853)
-+|.|+|+.+. .+ |.+..|++...+|+ .+.+++|.++ .+.++|++-.|.|..+. ...|||+.|+|
T Consensus 19 a~V~i~l~G~~-g~--------S~~~~L~~~~~~Fe-rG~~d~F~v~--~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V 86 (113)
T cd01753 19 DYIYLTLVGTA-GE--------SEKQLLDRPGYDFE-RGAVDEYKVK--VPEDLGELLLVRLRKRKYLLFDAWFCNYITV 86 (113)
T ss_pred cEEEEEEEECC-Cc--------ccCEEcCCCCCccC-CCCeeEEEEe--cccCCCCcEEEEEEECCCCCCCCeeecEEEE
Confidence 36999999644 22 22445655433476 4557788877 66899999999999874 67999999999
Q ss_pred ecCCCCeEEEEeccccccCCC
Q 003050 128 HAPDNQAIHFDCRSWVYPIKL 148 (853)
Q Consensus 128 ~~~p~~~~~Fpc~sWv~~~~~ 148 (853)
++..+..++||||+|+.+...
T Consensus 87 ~~~~~~~~~F~c~rWl~~~~~ 107 (113)
T cd01753 87 TGPGGDEYHFPCYRWIEGYGT 107 (113)
T ss_pred EcCCCCEEEEEhHHeECCCCE
Confidence 865566899999999987543
No 11
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.08 E-value=2.4e-05 Score=74.75 Aligned_cols=93 Identities=16% Similarity=0.327 Sum_probs=66.9
Q ss_pred CceEEEEEeccccCCCCCCcccCcccccccc--cccCCCCCceEEEEEEEecCCCCCCceEEEEEecC---CCceeeeEE
Q 003050 51 KSASVQIFSCTKVDPGTGKGKLSHIAYLKNG--KSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQH---KYKFFLQAA 125 (853)
Q Consensus 51 ~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~--~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~---~~e~~l~~i 125 (853)
-+|.|+|+-+. | .|....|+++ ..+|+ .+...+|.++. .++|++-.|.|.... ...|||+.|
T Consensus 19 a~V~i~L~G~~------g---~s~~~~L~~~~~~~~Fe-rGs~d~F~i~~---~~lG~l~~i~i~~d~~g~~~~W~~~~V 85 (120)
T cd01756 19 ANVFITLYGEN------G---DTGKRKLKKSNNKNKFE-RGQTDKFTVEA---VDLGKLKKIRIGHDNSGLGAGWFLDKV 85 (120)
T ss_pred cEEEEEEEeCC------C---ccccEEccCCCcCCccc-CCCeEEEEEEe---cCCCCeEEEEEEECCCCCCCCcEEeEE
Confidence 46999998632 1 2334566663 44566 45577898874 789999999999875 469999999
Q ss_pred EEecCC-CCeEEEEeccccccCCCC-CcceeEe
Q 003050 126 TLHAPD-NQAIHFDCRSWVYPIKLT-KTPRIFF 156 (853)
Q Consensus 126 ~l~~~p-~~~~~Fpc~sWv~~~~~~-~~~riff 156 (853)
+|.+.. +..++||||+|+...+.. .-.|++.
T Consensus 86 ~V~~~~~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 86 EIREPGTGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred EEEECCCceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 998655 668999999999876542 2245543
No 12
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.03 E-value=2.3e-05 Score=76.23 Aligned_cols=63 Identities=5% Similarity=0.028 Sum_probs=49.9
Q ss_pred ccCCCCCceEEEEEEEecCCCCCCceEEEEEecC---CCceeeeEEEEecCC-C---CeEEEEeccccccCCC
Q 003050 83 SHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQH---KYKFFLQAATLHAPD-N---QAIHFDCRSWVYPIKL 148 (853)
Q Consensus 83 ~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~---~~e~~l~~i~l~~~p-~---~~~~Fpc~sWv~~~~~ 148 (853)
..|+ .+..++|.|+ .+.++|++-.|.|.... ...|||..|+|.+.. + ..++||||+|+...+.
T Consensus 50 ~~Fe-rG~~d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 50 DYFE-RGNLDRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred cccc-CCCccEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 3466 4557899888 56889999999999764 679999999998754 2 3799999999976554
No 13
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.92 E-value=6e-05 Score=72.08 Aligned_cols=86 Identities=10% Similarity=0.222 Sum_probs=61.9
Q ss_pred CceEEEEEeccccCCCCCCcccCccccccc-ccccCCCCCceEEEEEEEecCCCCCCceEEEEEecC---CCceeeeEEE
Q 003050 51 KSASVQIFSCTKVDPGTGKGKLSHIAYLKN-GKSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQH---KYKFFLQAAT 126 (853)
Q Consensus 51 ~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~-~~~~~~~~~~~~~y~v~f~~~~~~G~pgai~v~n~~---~~e~~l~~i~ 126 (853)
-+|.|+|+.+. .+ |.+..|.+ ...+|+ .+.+.+|.+. .+.++|++-.|.|..+. ...|||++|+
T Consensus 19 a~V~i~L~G~~-g~--------s~~~~L~~~~~~~F~-rG~~~~f~i~--~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~ 86 (120)
T cd01752 19 AKVTITLYGAE-GE--------SEPHHLRDPEKPIFE-RGSVDSFLLT--TPFPLGELQSIRLWHDNSGLSPSWYLSRVI 86 (120)
T ss_pred cEEEEEEEeCC-CC--------cccEEcCCCCcccee-CCCeeEEEec--CccCCCCccEEEEEECCCCCCCCeEEEEEE
Confidence 46999999743 22 22344544 223465 4446677766 56899999999998764 5699999999
Q ss_pred EecCC-CCeEEEEeccccccCCC
Q 003050 127 LHAPD-NQAIHFDCRSWVYPIKL 148 (853)
Q Consensus 127 l~~~p-~~~~~Fpc~sWv~~~~~ 148 (853)
|.+.. +..++||||+|+...+.
T Consensus 87 V~~~~t~~~~~F~~~rWl~~~~~ 109 (120)
T cd01752 87 VRDLQTGKKWFFLCNDWLSVEEG 109 (120)
T ss_pred EEECCCCcEEEEEeCcEECCcCC
Confidence 98655 66899999999987644
No 14
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.50 E-value=0.00029 Score=67.32 Aligned_cols=47 Identities=13% Similarity=0.263 Sum_probs=40.6
Q ss_pred CCCCCceEEEEEecC---CCceeeeEEEEecCC-CCeEEEEeccccccCCC
Q 003050 102 PDFGNPGAFVIENQH---KYKFFLQAATLHAPD-NQAIHFDCRSWVYPIKL 148 (853)
Q Consensus 102 ~~~G~pgai~v~n~~---~~e~~l~~i~l~~~p-~~~~~Fpc~sWv~~~~~ 148 (853)
.++|+.-.|.|.... ...|||+.|+|++.+ +..++||||+|+...+.
T Consensus 50 ~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 50 QNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred CCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 899999999999874 579999999998877 66899999999986543
No 15
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=25.67 E-value=28 Score=43.45 Aligned_cols=46 Identities=20% Similarity=0.385 Sum_probs=33.5
Q ss_pred CCCCCceEEEEEecC---CCceeeeEEEEec-CCCCeEEEEeccccccCC
Q 003050 102 PDFGNPGAFVIENQH---KYKFFLQAATLHA-PDNQAIHFDCRSWVYPIK 147 (853)
Q Consensus 102 ~~~G~pgai~v~n~~---~~e~~l~~i~l~~-~p~~~~~Fpc~sWv~~~~ 147 (853)
+++|..--+.|-... ...||+++|.|.. +-|.+|.|||++|.-+..
T Consensus 1020 kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~ge 1069 (1295)
T KOG2080|consen 1020 KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGE 1069 (1295)
T ss_pred cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCcc
Confidence 688986666665432 3489999998854 337799999999986643
No 16
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=25.60 E-value=2.8e+02 Score=26.73 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=37.0
Q ss_pred CceEEEEEEEecCCCCCCceEEEEEecC----------CCceeeeEEEEecCCCCeEEEEecc
Q 003050 89 TKTTTYKLKFYVEPDFGNPGAFVIENQH----------KYKFFLQAATLHAPDNQAIHFDCRS 141 (853)
Q Consensus 89 ~~~~~y~v~f~~~~~~G~pgai~v~n~~----------~~e~~l~~i~l~~~p~~~~~Fpc~s 141 (853)
+.+.+|-+. .+.++|..-.|.++-+. ...||++.|+|+....+....-|.+
T Consensus 45 g~~~sfli~--t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 45 NKTYSFLID--TEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred CCEEEEEEE--cCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 334455444 78999999888888542 3489999999987776656666876
No 17
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=24.97 E-value=48 Score=35.76 Aligned_cols=24 Identities=25% Similarity=0.774 Sum_probs=20.1
Q ss_pred HHHHHHhhccccCCCccccCCHHHHHHHHH
Q 003050 632 MTWVKDYCSIFYKDDDSVKSDEEIQAWWKE 661 (853)
Q Consensus 632 ~~~V~~yv~~YY~sD~~V~~D~ELQaW~~E 661 (853)
.+||..||..|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 479999999999 345689999976
No 18
>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress). ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].
Probab=24.90 E-value=2.8e+02 Score=27.46 Aligned_cols=53 Identities=6% Similarity=0.004 Sum_probs=39.1
Q ss_pred eEEEEEEEecCCCCCCceEEEEEecCCCceeeeEEEEecCCCCeEEEEeccccccC
Q 003050 91 TTTYKLKFYVEPDFGNPGAFVIENQHKYKFFLQAATLHAPDNQAIHFDCRSWVYPI 146 (853)
Q Consensus 91 ~~~y~v~f~~~~~~G~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~Fpc~sWv~~~ 146 (853)
.++|+|. -+- ++.+=-+.+...-.+.|+.++|+|.+....+++|.-|.||-..
T Consensus 65 ~DtF~v~--G~C-~~~IC~lyL~r~G~dGW~Pe~V~Iy~~~~~~~~F~~~~~lp~~ 117 (125)
T PF06232_consen 65 TDTFQVT--GPC-LYQICYLYLYRSGSDGWKPEWVQIYGSGSKPVTFYFNTFLPNG 117 (125)
T ss_pred cceeEee--ccc-CCcccEEEEEEccCCCCEeCeEEEEEcCCCCeEEECCCcCCCC
Confidence 5678776 222 3355567777776789999999997644678999999999653
No 19
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=23.37 E-value=1.3e+02 Score=23.26 Aligned_cols=31 Identities=29% Similarity=0.562 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHHH
Q 003050 651 SDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALT 690 (853)
Q Consensus 651 ~D~ELQaW~~Ei~~~G~gd~k~~~~~P~l~T~~~Li~~lT 690 (853)
.+.+|++|..+ ||-... +...|+++|++.+-
T Consensus 5 s~~~L~~wL~~-----~gi~~~----~~~~~rd~Ll~~~k 35 (38)
T PF10281_consen 5 SDSDLKSWLKS-----HGIPVP----KSAKTRDELLKLAK 35 (38)
T ss_pred CHHHHHHHHHH-----cCCCCC----CCCCCHHHHHHHHH
Confidence 46789999987 442221 12369999998764
No 20
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=21.58 E-value=1.7e+02 Score=29.51 Aligned_cols=127 Identities=17% Similarity=0.205 Sum_probs=73.5
Q ss_pred ccccCCHHHHHHHHHHHHhcCCCCCCCCCCC-CCCCHHHHHHHHHHHhhhccccccccccccccccccCCCCcccccccC
Q 003050 647 DSVKSDEEIQAWWKEIREVGHGDKRNASWWF-EMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFI 725 (853)
Q Consensus 647 ~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~P-~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~ 725 (853)
+.|.+|++|-.+.+++.++ .-..++..|.| .+++.++|..++-.||-+|=.... .-.+-..-|+.-|. .+-.||
T Consensus 10 ~lIe~dp~l~ml~~~Mf~q-~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~AP~~~~--~~~~~glvG~P~na--iLdwpM 84 (141)
T PF12588_consen 10 DLIESDPRLYMLFTQMFDQ-PPYNADPTGNPPQIRDYDEMLQLLNHIMTTAPEFSD--ANEPVGLVGFPMNA--ILDWPM 84 (141)
T ss_pred HHHhcCHHHHHHHHHHHhC-cccccCCCCCccccccHHHHHHHHHHHHhhCCcccc--cCCCCCccccChHH--HHHhhc
Confidence 3568999999999999987 32233445777 799999999999999965443332 11123345554443 233345
Q ss_pred CCCCChHHHhhhhChHHHHHhhCCCHHHHHHHHHH--HHhhccCCCCcccccCCCCCCCCCcHHHHHHH
Q 003050 726 PDEGTQEFAELLIDSDKYYLKMLPERFAITLSTAL--VEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKF 792 (853)
Q Consensus 726 P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~--~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~ 792 (853)
-|+. .|.- |+ -|...+.+..+.- ...|++..+- ..|...+...|++ +.+++.+
T Consensus 85 ~T~s--G~a~--------F~--~p~vN~~lK~ILn~W~~fL~sp~S~-~vL~~~~~~GWfs-~~A~~~l 139 (141)
T PF12588_consen 85 GTPS--GYAF--------FL--DPDVNAQLKKILNEWGEFLSSPASR-SVLNTDPPNGWFS-PEALKEL 139 (141)
T ss_pred cChH--HHHH--------Hc--CHHHHHHHHHHHHHHHHHcCChhhh-ccccCCCCCCccC-HHHHHHh
Confidence 4432 3422 22 2344455555433 3467765443 3366653457997 4444443
Done!