Your job contains 1 sequence.
>003054
MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE
AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI
LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHVPK
TKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNV
SRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIINVNNGARGVG
FWTPEKGLTQKLSSNSTTKSKLKPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDF
VNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVF
LGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVT
CFCFFIFIGFVVWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLARIVVI
VWCFVVLILTQSYTASLTSLLTVQQLQPTITDVKMLIKRGDNVGYQKGSFVLGILKQLGF
DERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGF
GFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWG
LFLIAGVAAILALIIFMAVFIHQHWNVLKNSESSFLSRIRFFLKIFVSRDLSAHIFKDKG
GMQVHSMDATEASPGSCYPASPSSYSQHADSHFCFCGEQGTPRTEYAQAPLEIVSAVELT
IPDQEIATPSSS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003054
(852 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2066107 - symbol:GLR2.7 "glutamate receptor 2.... 2045 1.5e-211 1
TAIR|locus:2066086 - symbol:GLR2.8 "glutamate receptor 2.... 2024 2.4e-209 1
TAIR|locus:2047256 - symbol:GLR2.2 "glutamate receptor 2.... 1967 2.7e-203 1
TAIR|locus:2066148 - symbol:GLR2.9 "glutamate receptor 2.... 1966 3.4e-203 1
TAIR|locus:2181196 - symbol:GLR2.1 "glutamate receptor 2.... 1910 2.9e-197 1
TAIR|locus:2047251 - symbol:GLR2.3 "glutamate receptor 2.... 1861 4.6e-192 1
TAIR|locus:2206095 - symbol:GLR3.3 "glutamate receptor 3.... 1151 7.9e-117 1
TAIR|locus:2207165 - symbol:GLR3.4 "AT1G05200" species:37... 1118 2.5e-113 1
TAIR|locus:2122128 - symbol:GLUR2 "glutamate receptor 2" ... 1113 8.4e-113 1
TAIR|locus:2081805 - symbol:GLR3.6 "glutamate receptor 3.... 1088 3.8e-110 1
TAIR|locus:2062586 - symbol:GLR5 "glutamate receptor 5" s... 989 1.2e-99 1
TAIR|locus:2079681 - symbol:GLR1.4 "glutamate receptor 1.... 675 2.0e-96 2
TAIR|locus:2166001 - symbol:ATGLR1.2 species:3702 "Arabid... 696 4.8e-95 2
TAIR|locus:2166006 - symbol:GLR1.3 "glutamate receptor 1.... 668 1.5e-91 2
TAIR|locus:2102975 - symbol:GLR1.1 "glutamate receptor 1.... 402 2.1e-63 3
MGI|MGI:95816 - symbol:Grik3 "glutamate receptor, ionotro... 147 1.3e-19 3
UNIPROTKB|F1MCM2 - symbol:GRIK3 "Uncharacterized protein"... 146 1.5e-19 3
UNIPROTKB|F1SV43 - symbol:GRIK3 "Uncharacterized protein"... 146 1.5e-19 3
UNIPROTKB|F1P0L4 - symbol:GRIK3 "Uncharacterized protein"... 144 1.6e-19 3
UNIPROTKB|F1PWT6 - symbol:GRIK3 "Uncharacterized protein"... 146 1.7e-19 3
UNIPROTKB|Q13003 - symbol:GRIK3 "Glutamate receptor ionot... 147 2.7e-19 3
UNIPROTKB|Q38PU2 - symbol:GRIK3 "Glutamate receptor ionot... 147 2.7e-19 3
RGD|71027 - symbol:Grik3 "glutamate receptor, ionotropic,... 147 8.8e-19 3
UNIPROTKB|P42264 - symbol:Grik3 "Glutamate receptor ionot... 147 8.8e-19 3
ZFIN|ZDB-GENE-030616-53 - symbol:gria3b "glutamate recept... 161 3.4e-17 2
UNIPROTKB|F1P2J9 - symbol:GRIN1 "Uncharacterized protein"... 188 6.3e-17 3
UNIPROTKB|F1M4B0 - symbol:Grik1 "Glutamate receptor ionot... 152 3.4e-16 3
UNIPROTKB|F1P0S5 - symbol:GRIA3 "Uncharacterized protein"... 131 9.8e-16 3
RGD|70958 - symbol:Gria3 "glutamate receptor, ionotropic,... 129 1.8e-15 3
UNIPROTKB|P19492 - symbol:Gria3 "Glutamate receptor 3" sp... 129 1.8e-15 3
UNIPROTKB|E1BGZ0 - symbol:GRIA3 "Uncharacterized protein"... 129 2.0e-15 3
UNIPROTKB|F5H470 - symbol:GRIA3 "Glutamate receptor 3" sp... 129 2.2e-15 3
UNIPROTKB|G3V6Z5 - symbol:Gria3 "Glutamate receptor, iono... 129 2.9e-15 3
UNIPROTKB|G3V8Y9 - symbol:Gria3 "Glutamate receptor 3" sp... 129 2.9e-15 3
UNIPROTKB|P42263 - symbol:GRIA3 "Glutamate receptor 3" sp... 129 3.0e-15 3
UNIPROTKB|Q38PU6 - symbol:GRIA3 "Glutamate receptor 3" sp... 129 3.0e-15 3
UNIPROTKB|F1RU73 - symbol:LOC100519996 "Uncharacterized p... 129 3.2e-15 3
UNIPROTKB|E2RHU1 - symbol:GRIA3 "Uncharacterized protein"... 129 3.8e-15 3
ZFIN|ZDB-GENE-030131-8013 - symbol:gria4b "glutamate rece... 176 3.8e-15 2
MGI|MGI:95810 - symbol:Gria3 "glutamate receptor, ionotro... 129 5.9e-15 3
UNIPROTKB|E7EMV5 - symbol:GRIA1 "Glutamate receptor 1" sp... 142 6.5e-15 3
UNIPROTKB|E7EPY9 - symbol:GRIK1 "Glutamate receptor ionot... 152 6.8e-15 3
UNIPROTKB|F1P2K1 - symbol:GRIN1 "Uncharacterized protein"... 188 7.2e-15 4
UNIPROTKB|F1NW92 - symbol:GRIA1 "Uncharacterized protein"... 172 8.0e-15 2
UNIPROTKB|F1NKY9 - symbol:GRIN1 "Uncharacterized protein"... 188 1.1e-14 4
ZFIN|ZDB-GENE-051202-2 - symbol:grin1b "glutamate recepto... 180 1.2e-14 3
UNIPROTKB|F1P2J8 - symbol:GRIN1 "Uncharacterized protein"... 188 1.4e-14 4
UNIPROTKB|I3LT35 - symbol:GRIK1 "Uncharacterized protein"... 153 1.9e-14 3
MGI|MGI:95819 - symbol:Grin1 "glutamate receptor, ionotro... 180 2.0e-14 3
UNIPROTKB|A2AVK2 - symbol:GRIN1 "Glutamate receptor ionot... 179 2.3e-14 3
UNIPROTKB|Q05586 - symbol:GRIN1 "Glutamate receptor ionot... 179 2.6e-14 3
RGD|2736 - symbol:Grin1 "glutamate receptor, ionotropic, ... 179 2.6e-14 3
UNIPROTKB|P35439 - symbol:Grin1 "Glutamate receptor ionot... 179 2.6e-14 3
UNIPROTKB|F1P5Y1 - symbol:GRIA1 "Uncharacterized protein"... 172 2.6e-14 2
ZFIN|ZDB-GENE-020125-5 - symbol:gria3a "glutamate recepto... 161 2.8e-14 2
ZFIN|ZDB-GENE-061207-27 - symbol:grin2bb "glutamate recep... 189 8.7e-14 3
FB|FBgn0039916 - symbol:CG9935 species:7227 "Drosophila m... 190 1.9e-13 2
UNIPROTKB|F1P0E1 - symbol:GRIA4 "Uncharacterized protein"... 172 2.2e-13 2
UNIPROTKB|F1N982 - symbol:GRIA4 "Uncharacterized protein"... 172 2.2e-13 2
UNIPROTKB|F1P0E2 - symbol:GRIA4 "Uncharacterized protein"... 172 2.9e-13 2
RGD|2732 - symbol:Grik1 "glutamate receptor, ionotropic, ... 146 3.3e-13 3
UNIPROTKB|P22756 - symbol:Grik1 "Glutamate receptor ionot... 146 3.3e-13 3
UNIPROTKB|B7Z1W1 - symbol:GRIA1 "Glutamate receptor 1" sp... 166 4.2e-13 2
UNIPROTKB|F1NAD5 - symbol:GRID2 "Uncharacterized protein"... 144 4.6e-13 3
UNIPROTKB|J9NUD0 - symbol:GRIK3 "Uncharacterized protein"... 146 4.8e-13 2
UNIPROTKB|F1PDR1 - symbol:GRIA1 "Uncharacterized protein"... 166 5.8e-13 2
MGI|MGI:95811 - symbol:Gria4 "glutamate receptor, ionotro... 173 5.8e-13 2
RGD|61863 - symbol:Gria4 "glutamate receptor, ionotropic,... 173 5.8e-13 2
UNIPROTKB|G3V6W0 - symbol:Gria4 "Glutamate receptor 4" sp... 173 5.8e-13 2
UNIPROTKB|G3V6W1 - symbol:Gria4 "Glutamate receptor 4" sp... 173 5.8e-13 2
UNIPROTKB|P19493 - symbol:Gria4 "Glutamate receptor 4" sp... 173 5.8e-13 2
ZFIN|ZDB-GENE-020125-1 - symbol:gria1a "glutamate recepto... 135 6.6e-13 3
UNIPROTKB|E7ENK3 - symbol:GRIK1 "Glutamate receptor ionot... 152 7.8e-13 3
UNIPROTKB|F1PDP9 - symbol:GRIA1 "Uncharacterized protein"... 166 7.9e-13 2
UNIPROTKB|P42261 - symbol:GRIA1 "Glutamate receptor 1" sp... 166 7.9e-13 2
UNIPROTKB|Q38PU8 - symbol:GRIA1 "Glutamate receptor 1" sp... 166 7.9e-13 2
UNIPROTKB|E7ESV8 - symbol:GRIA1 "Glutamate receptor 1" sp... 166 8.2e-13 2
UNIPROTKB|B7Z9G9 - symbol:GRIA1 "cDNA, FLJ78833, highly s... 166 8.2e-13 2
UNIPROTKB|G3V164 - symbol:GRIA4 "Glutamate receptor, iono... 173 8.9e-13 2
UNIPROTKB|Q13224 - symbol:GRIN2B "Glutamate receptor iono... 177 9.0e-13 3
UNIPROTKB|P48058 - symbol:GRIA4 "Glutamate receptor 4" sp... 173 9.4e-13 2
UNIPROTKB|Q38PU5 - symbol:GRIA4 "Glutamate receptor 4" sp... 173 9.4e-13 2
UNIPROTKB|E2RIZ6 - symbol:GRIA4 "Uncharacterized protein"... 173 1.0e-12 2
UNIPROTKB|A9Z1Z8 - symbol:GRIK3 "Glutamate receptor, iono... 147 1.1e-12 2
MGI|MGI:95821 - symbol:Grin2b "glutamate receptor, ionotr... 176 1.1e-12 3
RGD|2738 - symbol:Grin2b "glutamate receptor, ionotropic,... 176 1.1e-12 3
UNIPROTKB|Q00960 - symbol:Grin2b "Glutamate receptor iono... 176 1.1e-12 3
UNIPROTKB|Q5R1P3 - symbol:GRIN2B "Glutamate receptor iono... 176 1.2e-12 3
UNIPROTKB|F1MCL3 - symbol:GRIN2B "Uncharacterized protein... 176 1.2e-12 3
UNIPROTKB|J9P2L9 - symbol:GRIN2B "Glutamate receptor iono... 176 1.2e-12 3
UNIPROTKB|J9NWC8 - symbol:GRIN1 "Glutamate receptor ionot... 179 1.3e-12 3
UNIPROTKB|F1N3G8 - symbol:GRIA1 "Uncharacterized protein"... 166 1.3e-12 2
WB|WBGene00001612 - symbol:glr-1 species:6239 "Caenorhabd... 179 1.4e-12 4
ZFIN|ZDB-GENE-051202-1 - symbol:grin1a "glutamate recepto... 178 1.9e-12 4
UNIPROTKB|F1SQ84 - symbol:GRIN2B "Uncharacterized protein... 176 2.1e-12 3
UNIPROTKB|E2R3A6 - symbol:E2R3A6 "Uncharacterized protein... 181 2.3e-12 3
UNIPROTKB|E1C2Q1 - symbol:GRIK4 "Uncharacterized protein"... 127 2.5e-12 3
UNIPROTKB|I3L9I7 - symbol:GRIA1 "Uncharacterized protein"... 158 3.2e-12 2
UNIPROTKB|F1PY46 - symbol:GRIN1 "Glutamate receptor ionot... 179 3.2e-12 3
UNIPROTKB|L7MTP7 - symbol:GRIN1 "Glutamate receptor ionot... 179 3.5e-12 3
WARNING: Descriptions of 206 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2066107 [details] [associations]
symbol:GLR2.7 "glutamate receptor 2.7" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0034976 "response
to endoplasmic reticulum stress" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY495450
EMBL:AY072069 EMBL:AY080587 IPI:IPI00533666 PIR:T02742
RefSeq:NP_180476.3 UniGene:At.38520 ProteinModelPortal:Q8LGN0
PaxDb:Q8LGN0 PRIDE:Q8LGN0 EnsemblPlants:AT2G29120.1 GeneID:817460
KEGG:ath:AT2G29120 TAIR:At2g29120 eggNOG:NOG263961
InParanoid:Q8LGN0 OMA:DSENSFR PhylomeDB:Q8LGN0
ProtClustDB:CLSN2683703 Genevestigator:Q8LGN0 Uniprot:Q8LGN0
Length = 952
Score = 2045 (724.9 bits), Expect = 1.5e-211, P = 1.5e-211
Identities = 403/810 (49%), Positives = 548/810 (67%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
MQ F+I+L +KSQVP ++FSAT P LTSI SPYF R +L+DSSQ AI AI+K+FGWR
Sbjct: 114 MQAEFMIRLADKSQVPTITFSATCPLLTSINSPYFVRATLDDSSQVKAIAAIVKSFGWRN 173
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI 120
V IYVDN++GE ++P LTDALQ + V R +I A DDQI KELYKL TMQTRVF+
Sbjct: 174 VVAIYVDNEFGEGILPLLTDALQDVQAFVVNRCLIPQEANDDQILKELYKLMTMQTRVFV 233
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEP-SVIDSMQGVIGVGPHVP 179
+HM P+LG R F+KA EIG+M +G VW++TDG+ NLL++ E S +++MQGV+GV H+P
Sbjct: 234 VHMPPTLGFRFFQKAREIGMMEEGYVWLLTDGVMNLLKSNERGSSLENMQGVLGVRSHIP 293
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
K+K L+NFR+RW++ F ++ D E+NIF L AYD+ ALA AVEK I S +D
Sbjct: 294 KSKKLKNFRLRWEKMFPKKGN---DEEMNIFALRAYDSITALAMAVEKTNIKSLRYDHPI 350
Query: 240 VS-RNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIINV-NNGAR 297
S N T+L G+S+ GP LL+ALS+ RF GL G++ ++GQL+SS F++IN+ + R
Sbjct: 351 ASGNNKTNLGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLESSVFDVINIIGSEER 410
Query: 298 GVGFWTPEKGXXXXXXXXXXXXXXXX--PIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKK 355
+G W P G P+IWPG S PKGW++PTN K LR+G+PVKK
Sbjct: 411 IIGLWRPSNGIVNAKSKNTTSVLGERLGPVIWPGKSKDVPKGWQIPTNGKMLRVGIPVKK 470
Query: 356 GFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDL 415
GF +FV+ IDP + T TGYC+++F+AV+++LPY+V ++ + PD + Y+++
Sbjct: 471 GFLEFVDAKIDPISNAMTP-TGYCIEIFEAVLKKLPYSVIPKYIAFLSPDEN----YDEM 525
Query: 416 VYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 475
VYQV+ G +DAVVGD+TIV NRS YVDFTLPYTESGVSM+VP+KD+K N WVFL+P +
Sbjct: 526 VYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESGVSMMVPLKDNK--NTWVFLRPWSL 583
Query: 476 DLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLA 535
DLWVT W+LEHRVN DFRGP Q+GTSFWF+FSTM F+ RE+V+SNLA
Sbjct: 584 DLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWFAFSTMNFAHREKVVSNLA 643
Query: 536 RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGIL 595
R VV+VWCFVVL+L QSY +T+ K LIK N+GYQ+G+FV +L
Sbjct: 644 RFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIGYQRGTFVRELL 703
Query: 596 KQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKF 655
K GFDE +L + S +C ELF NG I A+FDE+ Y+K+++ Q SKY M+EP F
Sbjct: 704 KSQGFDESQLKPFGSAVECDELFS----NGTITASFDEVAYIKVILSQNSSKYTMVEPSF 759
Query: 656 KTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGL 715
KTAGFGFVFP SPL DVS+AILNVT+G++M+ IE+ WFKK ++CPD +T +SS L L
Sbjct: 760 KTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTSLSSNHLSL 819
Query: 716 NSFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVL-KNSESSFLSRIRFFLKIFVSRDLSAH 774
+SFW +A F+++H + L +SE+SF +++F ++ F +D+ +H
Sbjct: 820 SSFWGLFLIAGIASFLALLIFVANFLYEHKHTLFDDSENSFRGKLKFLVRNFDEKDIKSH 879
Query: 775 IFKDKGGMQVHSMDATEASPGSCYPASPSS 804
+FK+ VH++ ++ + GS P + S
Sbjct: 880 MFKENA---VHNV-SSPITQGSSSPLTDQS 905
>TAIR|locus:2066086 [details] [associations]
symbol:GLR2.8 "glutamate receptor 2.8" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828 GO:GO:0071230
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 eggNOG:NOG263961
ProtClustDB:CLSN2683703 EMBL:AJ311495 IPI:IPI00537052 PIR:T02741
RefSeq:NP_180475.2 UniGene:At.13039 ProteinModelPortal:Q9C5V5
EnsemblPlants:AT2G29110.1 GeneID:817459 KEGG:ath:AT2G29110
TAIR:At2g29110 InParanoid:Q9C5V5 OMA:DSEDSIW PhylomeDB:Q9C5V5
Genevestigator:Q9C5V5 GermOnline:AT2G29110 Uniprot:Q9C5V5
Length = 947
Score = 2024 (717.5 bits), Expect = 2.4e-209, P = 2.4e-209
Identities = 417/832 (50%), Positives = 535/832 (64%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
MQ F+I+L NK+QVP +SFSATSP LTSI+S YF RG+++DS Q AI AI ++FGWR
Sbjct: 108 MQAKFMIKLANKTQVPTISFSATSPLLTSIKSDYFVRGTIDDSYQVKAIAAIFESFGWRS 167
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI 120
V IYVDN+ GE ++P L DALQ D +V RSVI A DDQI KELYKL T QTRVF+
Sbjct: 168 VVAIYVDNELGEGIMPYLFDALQ--DVQVD-RSVIPSEANDDQILKELYKLMTRQTRVFV 224
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPS-VIDSMQGVIGVGPHVP 179
+HM L SRIFEKA EIG+M +G VW+MT+GMT+++R + ++++ GV+GV HVP
Sbjct: 225 VHMASRLASRIFEKATEIGMMEEGYVWLMTNGMTHMMRHIHHGRSLNTIDGVLGVRSHVP 284
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
K+K LE+FR+RWKRNF +ENP + D +L+IFGL AYD+T ALA AVEK I+SF ++ +
Sbjct: 285 KSKGLEDFRLRWKRNFKKENPWLRD-DLSIFGLWAYDSTTALAMAVEKTNISSFPYNNAS 343
Query: 240 -VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIIN-VNNGAR 297
S N TDL +S+ GP LL+ALS RF GL G + +D QL+S FEIIN V N R
Sbjct: 344 GSSNNMTDLGTLHVSRYGPSLLEALSEIRFNGLAGRFNLIDRQLESPKFEIINFVGNEER 403
Query: 298 GVGFWTPEKGXXXXXXXXXXXXXXXX--PIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKK 355
VGFWTP G P+IWPG ST PKGWE+PTN KK+++GVPVKK
Sbjct: 404 IVGFWTPSNGLVNVNSNKTTSFTGERFGPLIWPGKSTIVPKGWEIPTNGKKIKVGVPVKK 463
Query: 356 GFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDL 415
GF +FV V DP T T+ GY +D+F+A +++LPY+V + + PD Y+DL
Sbjct: 464 GFFNFVEVITDPITNI-TTPKGYAIDIFEAALKKLPYSVIPQYYRFESPDDD----YDDL 518
Query: 416 VYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 475
VY+V G DAVVGD+TI RS Y DFTLPYTESGVSM+VP++D++ +N WVFL+P
Sbjct: 519 VYKVDNGTLDAVVGDVTITAYRSLYADFTLPYTESGVSMMVPVRDNENKNTWVFLKPWGL 578
Query: 476 DLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLA 535
DLWVT W+ EHRVN DFRGP Q+GTSFWFSFSTMVF+ RE+V+SNLA
Sbjct: 579 DLWVTTACFFVLIGFVVWLFEHRVNTDFRGPPHHQIGTSFWFSFSTMVFAHREKVVSNLA 638
Query: 536 RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGIL 595
R VV+VWCFVVL+LTQSY +VK LIK GD VGYQ G+FV L
Sbjct: 639 RFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQPAAINVKDLIKNGDYVGYQHGAFVKDFL 698
Query: 596 KQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKF 655
+ GF+ KL + S E+CH L NG I+AAFDE+ Y++ ++ QYCSKYA++EP F
Sbjct: 699 IKEGFNVSKLKPFGSSEECHALLS----NGSISAAFDEVAYLRAILSQYCSKYAIVEPTF 754
Query: 656 KTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGL 715
KTAGFGF FP +SPL DVSKAILNVT+GD+M+ IE+ WF K + CPD T +SS L L
Sbjct: 755 KTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSSNRLSL 814
Query: 716 NSFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVL-KNSESSFLSRIRFFLKIFVSRDLSAH 774
SFW + +F++++ + L +SE S ++ + F +D+ +H
Sbjct: 815 RSFWGLFLIAGIASFLALLIFVFLFLYENRHTLCDDSEDSIWRKLTSLFRNFDEKDIKSH 874
Query: 775 IFKDKGGMQVHSMDATEASPG-SCYPASPSSYSQHADSHFCFCGEQGTPRTE 825
FK V S T+ P S +P +S D F TP E
Sbjct: 875 TFKSSAVHHVSS-PMTQYIPSPSTLQIAPRPHSPSQDRAFELRRVSFTPNEE 925
>TAIR|locus:2047256 [details] [associations]
symbol:GLR2.2 "glutamate receptor 2.2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:AC007266 GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558
KO:K05387 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 ProtClustDB:CLSN2683132 EMBL:AY072068
IPI:IPI00519275 PIR:B84640 RefSeq:NP_180048.1 UniGene:At.39113
ProteinModelPortal:Q9SHV1 PRIDE:Q9SHV1 EnsemblPlants:AT2G24720.1
GeneID:817008 KEGG:ath:AT2G24720 TAIR:At2g24720 eggNOG:NOG288203
InParanoid:Q9SHV1 OMA:EMPENSN PhylomeDB:Q9SHV1
Genevestigator:Q9SHV1 GermOnline:AT2G24720 Uniprot:Q9SHV1
Length = 920
Score = 1967 (697.5 bits), Expect = 2.7e-203, P = 2.7e-203
Identities = 383/734 (52%), Positives = 502/734 (68%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
MQ +F+I++G KS+VP++S+SATSPSLTS+RSPYFFR + DSSQ AI AIIK FGWRE
Sbjct: 107 MQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYEDSSQVHAIKAIIKLFGWRE 166
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI 120
VP+Y+DN +GE ++P LTD+LQ I+ R+PYRSVI ATD I EL K+ M TRVFI
Sbjct: 167 VVPVYIDNTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATDQDISVELLKMMNMPTRVFI 226
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHVPK 180
+HM SL S +F KA E+GLM G VWI+T+G+ + LR++ + I++M+GV+G+ ++PK
Sbjct: 227 VHMSSSLASTVFIKAKELGLMKPGYVWILTNGVMDGLRSINETGIEAMEGVLGIKTYIPK 286
Query: 181 TKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNV 240
+K LE FR RWKR F Q +ELN++GL AYDAT ALA A+E AGI + F +
Sbjct: 287 SKDLETFRSRWKRRFPQ-------MELNVYGLWAYDATTALAMAIEDAGINNMTFSNVDT 339
Query: 241 SRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIIN-VNNGARGV 299
+N ++L+ G+SQ GPKLLQ +S+ +FKGL GD+ FV GQLQ S FEI+N + G R +
Sbjct: 340 GKNVSELDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQLQPSVFEIVNMIGTGERSI 399
Query: 300 GFWTPEKGXXXXXXXX--XXXXXXXXP-----IIWPGDSTSDPKGWEVPTNEKKLRIGVP 352
GFWT G P IIWPG++ S PKGWE+PTN KKLRIGVP
Sbjct: 400 GFWTEGNGLVKKLDQEPRSIGTLSTWPDHLKHIIWPGEAVSVPKGWEIPTNGKKLRIGVP 459
Query: 353 VKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY 412
+ GF+D V VT DP T T V G+C+D F+AVIQ +PY V+Y+F P+ +P+G +G++
Sbjct: 460 KRIGFTDLVKVTRDPITNS-TVVKGFCIDFFEAVIQAMPYDVSYEFFPFEKPNGEPAGNH 518
Query: 413 NDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQP 472
NDLV+QV+LG+FDAVVGD TI+ NRS++VDFTLP+ +SGV +IVP+KD KR+ + FL+P
Sbjct: 519 NDLVHQVYLGQFDAVVGDTTILANRSSFVDFTLPFMKSGVGLIVPLKDEVKRDKFSFLKP 578
Query: 473 LTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVIS 532
L+ +LW+T W LEHRVN DFRGPA Q T FWF+FSTMVF+ RERV+S
Sbjct: 579 LSIELWLTTLVFFFLVGISVWTLEHRVNSDFRGPANYQASTIFWFAFSTMVFAPRERVLS 638
Query: 533 NLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVL 592
AR +V+ W FV+L+LTQSY IT + L+ RG+ VGYQ+ SF+L
Sbjct: 639 FGARSLVVTWYFVLLVLTQSYTASLASLLTSQQLNPTITSMSSLLHRGETVGYQRTSFIL 698
Query: 593 GILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIE 652
G L + GF + LV +++ E+C EL +KG NGG+AAAF PY++L +GQYC+ Y M+E
Sbjct: 699 GKLNETGFPQSSLVPFDTAEECDELLKKGPKNGGVAAAFLGTPYVRLFLGQYCNTYKMVE 758
Query: 653 PKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKK-HSSCPDAST----- 706
F GFGFVFP+ SPLV DVS+AIL V E K E+E AWFKK SCPD T
Sbjct: 759 EPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAVELEHAWFKKKEQSCPDPVTNPDSN 818
Query: 707 -VVSSRSLGLNSFW 719
V++ LG+ SFW
Sbjct: 819 PTVTAIQLGVGSFW 832
>TAIR|locus:2066148 [details] [associations]
symbol:GLR2.9 "glutamate receptor 2.9" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
eggNOG:NOG263961 ProtClustDB:CLSN2683703 IPI:IPI00520184 PIR:T02740
RefSeq:NP_180474.1 UniGene:At.52963 ProteinModelPortal:O81078
IntAct:O81078 PaxDb:O81078 PRIDE:O81078 EnsemblPlants:AT2G29100.1
GeneID:817458 KEGG:ath:AT2G29100 TAIR:At2g29100 InParanoid:O81078
OMA:WIFTESA PhylomeDB:O81078 Genevestigator:O81078
GermOnline:AT2G29100 Uniprot:O81078
Length = 940
Score = 1966 (697.1 bits), Expect = 3.4e-203, P = 3.4e-203
Identities = 397/812 (48%), Positives = 534/812 (65%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
MQ +F+I+L NK+QVP ++FSATSP LTSI+SPYF R +++DSSQ AI +I K F WR
Sbjct: 105 MQADFMIKLANKTQVPTITFSATSPLLTSIKSPYFVRATIDDSSQVRAIASIFKFFRWRR 164
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI 120
V IYVDN++GE +P L DALQ ++ + RSVI P A DD+I+KEL KL Q RVF+
Sbjct: 165 VVAIYVDNEFGEGFMPFLFDALQDVEVK---RSVIPPEAIDDEIQKELRKLMERQARVFV 221
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPS-VIDSMQGVIGVGPHVP 179
+HM SL R+F+ A +IG+M +G VW+MT+GMT+++R + +++++GV+GV HVP
Sbjct: 222 VHMESSLALRVFQIARDIGMMEEGYVWLMTNGMTHMMRHINNGRSLNTIEGVLGVRSHVP 281
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDK-T 238
K+K L +FR+RWKR F +ENPS+ D +LN+F L AYD+ ALA+AVEKA S +D +
Sbjct: 282 KSKELGDFRLRWKRTFEKENPSMRD-DLNVFALWAYDSITALAKAVEKANTKSLWYDNGS 340
Query: 239 NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIIN-VNNGAR 297
+S+N TDL G+S GP L +A S RF GL G++ +DGQLQS FEIIN V N R
Sbjct: 341 TLSKNRTDLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINFVGNEER 400
Query: 298 GVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGF 357
+GFWTP G P+IWPG S PKGWE+P KKLR+GVP+KKGF
Sbjct: 401 IIGFWTPRDGLMDATSSNKKTLG---PVIWPGKSKIVPKGWEIPG--KKLRVGVPMKKGF 455
Query: 358 SDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVY 417
DFV VTI+P T + T TGY +++F+A ++ELPY V ++V + P+ +YN+LVY
Sbjct: 456 FDFVKVTINPITNKKTP-TGYAIEIFEAALKELPYLVIPEYVSFESPN-----NYNNLVY 509
Query: 418 QVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDL 477
QV+ +DAVVGDITI NRS Y DFTLP+TESGVSM+VP++D++ ++ WVFL+P + +L
Sbjct: 510 QVYDKTWDAVVGDITITANRSLYADFTLPFTESGVSMMVPVRDNENKDTWVFLEPWSLEL 569
Query: 478 WVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLARI 537
WVT W+ EHRVN DFRGP Q+GTS WFSFSTMVF+ RE V+SNLAR
Sbjct: 570 WVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIGTSLWFSFSTMVFAHRENVVSNLARF 629
Query: 538 VVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQ 597
VV+VWCFVVL+LTQSY +T+V LIK D VGYQ G+FV IL
Sbjct: 630 VVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLIKNRDCVGYQGGAFVKDILLG 689
Query: 598 LGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKT 657
LGF E +L ++S +D +L KG + GIAAAFDE+ Y+K ++ Q CSKY M+EP FKT
Sbjct: 690 LGFHEDQLKPFDSAKDADDLLSKGK-SKGIAAAFDEVAYLKAILSQSCSKYVMVEPTFKT 748
Query: 658 AGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
GFGF FP +SPL + S+AILN+T+ + ++IED WF K + CPD T +SS L L+S
Sbjct: 749 GGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCPDPMTALSSNRLNLSS 808
Query: 718 FWXXXXXXXXXXXXXXXXXMAVFIHQHWNVL-KNSESSFLSRIRFFLKIFVSRDLSAHIF 776
F +A+F+++H + L +SE S +++F KIF +D+++H F
Sbjct: 809 FLGLFLIAGTAISFSLLVFVALFLYEHRHTLGDDSEDSLWRKLKFLFKIFDEKDMNSHTF 868
Query: 777 KDKGGMQVHS-MDATEASPGSC----YPASPS 803
K+ + S M SP + +P SPS
Sbjct: 869 KNSAIHNISSPMTHKTPSPSTVQITPWPQSPS 900
>TAIR|locus:2181196 [details] [associations]
symbol:GLR2.1 "glutamate receptor 2.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AF007271 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AK228008 IPI:IPI00532199 PIR:T01809 RefSeq:NP_198062.2
UniGene:At.30826 ProteinModelPortal:O04660 IntAct:O04660
PaxDb:O04660 EnsemblPlants:AT5G27100.1 GeneID:832768
KEGG:ath:AT5G27100 TAIR:At5g27100 eggNOG:NOG323745
InParanoid:O04660 OMA:GWREVAP PhylomeDB:O04660
ProtClustDB:CLSN2683132 Genevestigator:O04660 GermOnline:AT5G27100
Uniprot:O04660
Length = 901
Score = 1910 (677.4 bits), Expect = 2.9e-197, P = 2.9e-197
Identities = 375/734 (51%), Positives = 492/734 (67%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
MQ F+I++G KSQVPI+++SATSPSL SIRS YFFR + +DSSQ AI IIK FGWRE
Sbjct: 107 MQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDDSSQVHAIKEIIKLFGWRE 166
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI 120
P+YVD+ +GE ++P LTD LQ I+ R+PYR+VISP ATDD+I EL ++ T+ TRVF+
Sbjct: 167 VAPVYVDDTFGEGIMPRLTDVLQEINVRIPYRTVISPNATDDEISVELLRMMTLPTRVFV 226
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHVPK 180
+H++ L SR F KA EIGLM +G VWI+T+ +T++L + + I++MQGV+GV +VP+
Sbjct: 227 VHLVELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIMNETEIETMQGVLGVKTYVPR 286
Query: 181 TKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNV 240
+K LENFR RW + F P I D LN++GL AYDAT ALA A+E+AG ++ F K +
Sbjct: 287 SKELENFRSRWTKRF----P-ISD--LNVYGLWAYDATTALALAIEEAGTSNLTFVKMDA 339
Query: 241 SRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIINVNN-GARGV 299
RN ++L+ G+SQ GPKLLQ LS RF+GL GD+ F++G+LQ S FEI+NVN G R +
Sbjct: 340 KRNVSELQGLGVSQYGPKLLQTLSRVRFQGLAGDFQFINGELQPSVFEIVNVNGQGGRTI 399
Query: 300 GFWTPEKGXX-------XXXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVP 352
GFW E G PIIWPGD+TS PKGWE+PTN K+L+IGVP
Sbjct: 400 GFWMKEYGLFKNVDQKPASKTTFSSWQDRLRPIIWPGDTTSVPKGWEIPTNGKRLQIGVP 459
Query: 353 VKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY 412
V F FV T DP T T +G+ +D F+AVIQ +PY ++YDF+P+ G Y
Sbjct: 460 VNNTFQQFVKATRDPITNS-TIFSGFSIDYFEAVIQAIPYDISYDFIPF------QDGGY 512
Query: 413 NDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQP 472
+ LVYQV+LG++DAVV D TI NRS YVDF+LPYT SGV ++VP+KDS +R++ +FL P
Sbjct: 513 DALVYQVYLGKYDAVVADTTISSNRSMYVDFSLPYTPSGVGLVVPVKDSVRRSSTIFLMP 572
Query: 473 LTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVIS 532
LT LW+ WVLEHRVN DF GP Q+ T FWFSFS MVF+ RERV+S
Sbjct: 573 LTLALWLISLLSFFIIGLVVWVLEHRVNPDFDGPGQYQLSTIFWFSFSIMVFAPRERVLS 632
Query: 533 NLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVL 592
AR+VVI+W F+VL+LTQSY +T++ L+ +G++VGYQ SF+L
Sbjct: 633 FWARVVVIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNINSLLAKGESVGYQS-SFIL 691
Query: 593 GILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIE 652
G L+ GF E LV Y SPE C L KG GG++A E+PY+++ +GQYC+KY M++
Sbjct: 692 GRLRDSGFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLMEVPYVRIFLGQYCNKYKMVQ 751
Query: 653 PKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKK-HSSCPDAST----- 706
FK G GFVFP+ SPLV D+S+AIL V E +K ++E+AWFK SCPD T
Sbjct: 752 TPFKVDGLGFVFPIGSPLVADISRAILKVEESNKANQLENAWFKPIDESCPDPLTNPDPN 811
Query: 707 -VVSSRSLGLNSFW 719
VS R LG +SFW
Sbjct: 812 PSVSFRQLGFDSFW 825
>TAIR|locus:2047251 [details] [associations]
symbol:GLR2.3 "glutamate receptor 2.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 EMBL:AC007266 GO:GO:0071230
eggNOG:COG0683 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
ProtClustDB:CLSN2683132 IPI:IPI00526740 PIR:A84640
RefSeq:NP_180047.1 UniGene:At.52897 ProteinModelPortal:Q9SHV2
PaxDb:Q9SHV2 PRIDE:Q9SHV2 EnsemblPlants:AT2G24710.1 GeneID:817007
KEGG:ath:AT2G24710 TAIR:At2g24710 InParanoid:Q9SHV2 OMA:QASTICW
PhylomeDB:Q9SHV2 Genevestigator:Q9SHV2 GermOnline:AT2G24710
Uniprot:Q9SHV2
Length = 895
Score = 1861 (660.2 bits), Expect = 4.6e-192, P = 4.6e-192
Identities = 364/734 (49%), Positives = 489/734 (66%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
MQ +F+I++G KS+VPI+S+SATSP LTS+RSPYF R + DS Q I AIIK FGWRE
Sbjct: 106 MQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYEDSFQVQPIKAIIKLFGWRE 165
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI 120
VP+Y+DN +GE ++P LTDALQ I+ R+PYRSVI+ ATD +I EL K+ M TRVF+
Sbjct: 166 VVPVYIDNTFGEGIMPRLTDALQDINVRIPYRSVIAINATDHEISVELLKMMNMPTRVFL 225
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHVPK 180
+HM L SR F KA E+GLM G VWI+T+G+ + L + + +++M+GV+G+ ++PK
Sbjct: 226 VHMYYDLASRFFIKAKELGLMEPGYVWILTNGVIDDLSLINETAVEAMEGVLGIKTYIPK 285
Query: 181 TKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKT-N 239
+ LE FR RW+ F P VEL+++GL AYDAT ALA A+E+AG + F K +
Sbjct: 286 SPDLEKFRSRWRSLF----PR---VELSVYGLWAYDATTALAVAIEEAGTNNMTFSKVVD 338
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIINV-NNGARG 298
RN ++LEA G+SQ GPKLLQ L + +F+GL G++ F GQLQ S FEI+N+ N G +
Sbjct: 339 TGRNVSELEALGLSQFGPKLLQTLLTVQFRGLAGEFRFFRGQLQPSVFEIVNIINTGEKS 398
Query: 299 VGFWTPEKGXXXXXXXXXXXXXXXXP-------IIWPGDSTSDPKGWEVPTNEKKLRIGV 351
+GFW G I+WPG++ S PKGW++PT KKLRIGV
Sbjct: 399 IGFWKEGNGLVKKLDQQASSISALSTWKDHLKHIVWPGEADSVPKGWQIPTKGKKLRIGV 458
Query: 352 PVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGS 411
P + G++D V VT DP T T VTG+C+D F+AVI+ELPY V+Y+F+P+ +PDG ++G+
Sbjct: 459 PKRTGYTDLVKVTRDPITNS-TVVTGFCIDFFEAVIRELPYDVSYEFIPFEKPDGKTAGN 517
Query: 412 YNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 471
YNDLVYQV+LG +DAVVGD TI+ NRS+YVDFT P+ +SGV +IV + D KR+ +F++
Sbjct: 518 YNDLVYQVYLGRYDAVVGDTTILVNRSSYVDFTFPFIKSGVGLIVEMTDPVKRDYILFMK 577
Query: 472 PLTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVI 531
PL+W LW+T WVLE++ N DF GP Q T WF+FSTMVF+ RERV
Sbjct: 578 PLSWKLWLTSFISFFLVGCTVWVLEYKRNPDFSGPPRFQASTICWFAFSTMVFAPRERVF 637
Query: 532 SNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFV 591
S AR +VI W F+VL+LTQSY IT + L+++G+ VGYQ+ SF+
Sbjct: 638 SFWARALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTITSMSSLLEKGETVGYQRTSFI 697
Query: 592 LGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMI 651
LG LK+ GF + LV +++ E+C EL KG GG++ AF EIPY++L +GQ+C+ Y M+
Sbjct: 698 LGKLKERGFPQSSLVPFDTAEECDELLSKGPKKGGVSGAFLEIPYLRLFLGQFCNTYKMV 757
Query: 652 EPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKK-HSSCPDAST---- 706
E F GFGFVFP+ SPLV DVS+AIL V E K E+E AWFKK SCPD T
Sbjct: 758 EEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAMELERAWFKKKEQSCPDPITNPDP 817
Query: 707 --VVSSRSLGLNSF 718
+SR L ++SF
Sbjct: 818 NPSFTSRQLDIDSF 831
>TAIR|locus:2206095 [details] [associations]
symbol:GLR3.3 "glutamate receptor 3.3" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005262 "calcium channel activity"
evidence=IMP] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0008066 "glutamate receptor activity" evidence=IMP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IMP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 GO:GO:0009630
InterPro:IPR001828 GO:GO:0071230 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AC025815
IPI:IPI00548873 PIR:C96495 RefSeq:NP_174978.1 UniGene:At.39090
ProteinModelPortal:Q9C8E7 TCDB:1.A.10.1.10 PaxDb:Q9C8E7
PRIDE:Q9C8E7 EnsemblPlants:AT1G42540.1 GeneID:840859
KEGG:ath:AT1G42540 TAIR:At1g42540 InParanoid:Q9C8E7 OMA:FTCERRV
PhylomeDB:Q9C8E7 ProtClustDB:CLSN2914596 ArrayExpress:Q9C8E7
Genevestigator:Q9C8E7 Uniprot:Q9C8E7
Length = 933
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 250/739 (33%), Positives = 386/739 (52%)
Query: 4 NFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVP 63
+ I + N+ +VP+LSF+ T P ++ ++ PYF R + +D Q AI +I+ +GW+E +
Sbjct: 107 HMISHMANELRVPLLSFAVTDPVMSPLQFPYFIRTTQSDLYQMDAIASIVDFYGWKEVIA 166
Query: 64 IYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISP--LATDDQIEKELYKLFTMQTRVFIL 121
++VD+ +G + +L D L + R+ Y++ + P ++I L K+ +Q R+ ++
Sbjct: 167 VFVDDDFGRNGVAALNDKLASRRLRITYKAGLHPDTAVNKNEIMNMLIKIMLLQPRIVVI 226
Query: 122 HMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEP---SVIDSMQGVIGVGPHV 178
H+ LG +F++A +G+M G VWI TD ++ L + P ++++QGV+ + PH
Sbjct: 227 HVYSELGFAVFKEAKYLGMMGNGYVWIATDWLSTNLDSSSPLPAERLETIQGVLVLRPHT 286
Query: 179 PKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEK----AGITSFG 234
P + F RW++ S + LN +GL AYD+ LA ++K G SF
Sbjct: 287 PDSDFKREFFKRWRKM------SGASLALNTYGLYAYDSVMLLARGLDKFFKDGGNISFS 340
Query: 235 FDK--TNVSRNAT-DLEAFGISQNGPKLLQALSSTRFKGLTGDYIFV-DGQLQSSAFEII 290
+ ++ +LEA + G LL+ + TR GLTG F D A++II
Sbjct: 341 NHSMLNTLGKSGNLNLEAMTVFDGGEALLKDILGTRMVGLTGQLQFTPDRSRTRPAYDII 400
Query: 291 NV-NNGARGVGFWTPEKGXXXXXXXXXXXXX----XXXP----IIWPGDSTSDPKGWEVP 341
NV G R +G+W+ G P +IWPG++ + P+GW
Sbjct: 401 NVAGTGVRQIGYWSNHSGLSTVLPELLYTKEKPNMSTSPKLKHVIWPGETFTKPRGWVFS 460
Query: 342 TNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPY 401
N K+L+IGVP++ + +FV+ + G+C+DVF A + LPYAV F+PY
Sbjct: 461 NNGKELKIGVPLRVSYKEFVSQIRGTENM----FKGFCIDVFTAAVNLLPYAVPVKFIPY 516
Query: 402 GQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
G +G + SY +V + G FD VVGD+ IV NR+ VDFT PY SG+ ++ P K
Sbjct: 517 G--NGKENPSYTHMVEMITTGNFDGVVGDVAIVTNRTKIVDFTQPYAASGLVVVAPFKKL 574
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFST 521
AW FL+P +W W+LEHR N++FRGP +Q T WFSFST
Sbjct: 575 NS-GAWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVTILWFSFST 633
Query: 522 MVFSQRERVISNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
M F+ RE +S L R+V+I+W FVVLI+ SY I ++ L +R D
Sbjct: 634 MFFAHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLRERDD 693
Query: 582 NVGYQKGSFVLGILK-QLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLL 640
+GYQ GSF L+ +L E +LV +PE + + G GG+AA DE PY++L
Sbjct: 694 PIGYQVGSFAESYLRNELNISESRLVPLGTPEAYAKALKDGPSKGGVAAIVDERPYVELF 753
Query: 641 IGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSS 700
+ C+ Y ++ +F +G+GF FP SPL D+S AIL + E ++ I D W K++
Sbjct: 754 LSSNCA-YRIVGQEFTKSGWGFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNA- 811
Query: 701 CPDASTVVSSRSLGLNSFW 719
C + + S L L SFW
Sbjct: 812 CTLENAELESDRLHLKSFW 830
>TAIR|locus:2207165 [details] [associations]
symbol:GLR3.4 "AT1G05200" species:3702 "Arabidopsis
thaliana" [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0019722
"calcium-mediated signaling" evidence=IDA] [GO:0070417 "cellular
response to cold" evidence=IEP] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEP] [GO:0071311
"cellular response to acetate" evidence=IEP] [GO:0005262 "calcium
channel activity" evidence=IMP] [GO:0006816 "calcium ion transport"
evidence=IDA;IMP] [GO:0008066 "glutamate receptor activity"
evidence=IMP] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IDA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 GO:GO:0009611
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0015276 GO:GO:0071260 GO:GO:0070417 InterPro:IPR001828
GO:GO:0071230 EMBL:AC000098 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 TCDB:1.A.10.1.10
EMBL:AY072070 EMBL:AK118206 EMBL:AF167355 IPI:IPI00517695
IPI:IPI00538965 PIR:D86186 PIR:T51135 RefSeq:NP_001030971.1
RefSeq:NP_172012.2 UniGene:At.10412 UniGene:At.66937
ProteinModelPortal:Q8GXJ4 PRIDE:Q8GXJ4 EnsemblPlants:AT1G05200.1
EnsemblPlants:AT1G05200.2 GeneID:839268 KEGG:ath:AT1G05200
GeneFarm:2532 TAIR:At1g05200 InParanoid:Q8GXJ4 OMA:WHLDEND
PhylomeDB:Q8GXJ4 ProtClustDB:CLSN2690705 Genevestigator:Q8GXJ4
GermOnline:AT1G05200 GO:GO:0071311 Uniprot:Q8GXJ4
Length = 959
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 255/740 (34%), Positives = 381/740 (51%)
Query: 4 NFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVP 63
+ I + N+ VP+LSF AT P+L+S++ PYF R + ND Q AI + GWR+ +
Sbjct: 139 HMISYVANELHVPLLSFGATDPTLSSLQFPYFLRTTQNDYFQMHAIADFLSYSGWRQVIA 198
Query: 64 IYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHM 123
I+VD++ G I L D L +R+ Y++ I+P A I L + M++RVF++H+
Sbjct: 199 IFVDDECGRNGISVLGDVLAKKRSRISYKAAITPGADSSSIRDLLVSVNLMESRVFVVHV 258
Query: 124 LPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE---PSVIDSMQGVIGVGPHVPK 180
P G +F A +G+M G VWI TD + + ++E +D +QGV+ + +
Sbjct: 259 NPDSGLNVFSVAKSLGMMASGYVWIATDWLPTAMDSMEHVDSDTMDLLQGVVAFRHYTIE 318
Query: 181 TKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV-----EKAGITSFGF 235
+ F RWK L+ N N + + AYD+ +A A+ E IT F
Sbjct: 319 SSVKRQFMARWKN--LRPNDGF-----NSYAMYAYDSVWLVARALDVFFRENNNIT-FSN 370
Query: 236 D----KTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQSSAFEII 290
D KTN S L A + G K ++ + G+TG F D + A+E++
Sbjct: 371 DPNLHKTNGS--TIQLSALSVFNEGEKFMKIILGMNHTGVTGPIQFDSDRNRVNPAYEVL 428
Query: 291 NVNNGA-RGVGFWTPEKGXXXXXXXX--------XXXXXXXXPIIWPGDSTSDPKGWEVP 341
N+ A R VG+W+ G II+PG+ T P+GW P
Sbjct: 429 NLEGTAPRTVGYWSNHSGLSVVHPETLYSRPPNTSTANQRLKGIIYPGEVTKPPRGWVFP 488
Query: 342 TNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPY 401
N K LRIGVP + ++D+V+ K + P V GYC+DVF+A I+ LPY V ++ Y
Sbjct: 489 NNGKPLRIGVPNRVSYTDYVS-----KDKNPPGVRGYCIDVFEAAIELLPYPVPRTYILY 543
Query: 402 GQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
G DG + SY++LV +V FD VGDITIV NR+ YVDFT P+ ESG+ ++ P+K++
Sbjct: 544 G--DGKRNPSYDNLVNEVVADNFDVAVGDITIVTNRTRYVDFTQPFIESGLVVVAPVKEA 601
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFST 521
K + W FL+P T ++W W+LEHR N++FRGP +Q+ T FWFSFST
Sbjct: 602 KS-SPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEFRGPPRRQLITIFWFSFST 660
Query: 522 MVFSQRERVISNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
M FS RE +S+L R V+I+W FVVLI+ SY I + L+ +
Sbjct: 661 MFFSHRENTVSSLGRFVLIIWLFVVLIINSSYTASLTSILTIRQLTSRIEGIDSLVTSNE 720
Query: 582 NVGYQKGSFVLG-ILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLL 640
+G Q G+F ++ +L ++V E Q+G GG+AA DE+PY+++L
Sbjct: 721 PIGVQDGTFARNYLINELNILPSRIVPLKDEEQYLSALQRGPNAGGVAAIVDELPYIEVL 780
Query: 641 IGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK-KHS 699
+ K+ + +F G+GF F SPL D+S AIL ++E ++++I W KH
Sbjct: 781 LTNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGELEKIHRKWLNYKHE 840
Query: 700 SCPDASTVVSSRSLGLNSFW 719
S S+ L L SFW
Sbjct: 841 CSMQISNSEDSQ-LSLKSFW 859
>TAIR|locus:2122128 [details] [associations]
symbol:GLUR2 "glutamate receptor 2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=IMP] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IMP] [GO:0030007 "cellular potassium ion
homeostasis" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:AL022604
EMBL:AL161587 GO:GO:0071230 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 EMBL:AF159498 EMBL:AF159499 EMBL:AY059778
IPI:IPI00535851 PIR:T06128 RefSeq:NP_567981.1 RefSeq:NP_974686.1
UniGene:At.2283 ProteinModelPortal:Q93YT1 PRIDE:Q93YT1
EnsemblPlants:AT4G35290.1 EnsemblPlants:AT4G35290.2 GeneID:829682
KEGG:ath:AT4G35290 TAIR:At4g35290 InParanoid:Q93YT1 OMA:MIDELNI
PhylomeDB:Q93YT1 ProtClustDB:CLSN2689771 Genevestigator:Q93YT1
GermOnline:AT4G35290 Uniprot:Q93YT1
Length = 912
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 257/748 (34%), Positives = 400/748 (53%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
+ + + L N+ VP+LSF+A PSL++++ P+F + + +D AI +I +GW E
Sbjct: 105 IMAHVLSHLANELSVPMLSFTALDPSLSALQFPFFVQTAPSDLFLMRAIAEMISYYGWSE 164
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPL----ATDDQIEKELYKLFTMQT 116
+ +Y D+ I +L D L+ ++ Y++V+ PL + +I EL K+ M++
Sbjct: 165 VIALYNDDDNSRNGITALGDELEGRRCKISYKAVL-PLDVVITSPREIINELVKIQGMES 223
Query: 117 RVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEP---SVIDSMQGVIG 173
RV I++ P G +IFE+A ++G+M KG VWI T +T+LL ++ P +S++GV+
Sbjct: 224 RVIIVNTFPKTGKKIFEEAQKLGMMEKGYVWIATTWLTSLLDSVNPLPAKTAESLRGVLT 283
Query: 174 VGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEK-----A 228
+ H P +K ++F RW N L V LN++GL AYD +A AV++ A
Sbjct: 284 LRIHTPNSKKKKDFVARW--NKLSNGT----VGLNVYGLYAYDTVWIIARAVKRLLDSRA 337
Query: 229 GITSFGFDKTNVSRN---ATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFV-DGQLQS 284
I SF D S + +L A I G + L + +T G+TG F+ D +
Sbjct: 338 NI-SFSSDPKLTSMKGGGSLNLGALSIFDQGSQFLDYIVNTNMTGVTGQIQFLPDRSMIQ 396
Query: 285 SAFEIINV-NNGARGVGFWT--------PEKGXXXXXXXXXXXXXXXXPIIWPGDSTSDP 335
+++IINV ++G R +G+W+ P + + WPG ++ P
Sbjct: 397 PSYDIINVVDDGFRQIGYWSNHSGLSIIPPESLYKKLSNRSSSNQHLNNVTWPGGTSETP 456
Query: 336 KGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVA 395
+GW P N ++LRIGVP + F +FV+ +D + V GY +DVF+A ++ + Y V
Sbjct: 457 RGWVFPNNGRRLRIGVPDRASFKEFVS-RLDGSNK----VQGYAIDVFEAAVKLISYPVP 511
Query: 396 YDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMI 455
++FV +G DG + ++N+ V V +G FDAVVGDI IV R+ VDFT PY ESG+ ++
Sbjct: 512 HEFVLFG--DGLKNPNFNEFVNNVTIGVFDAVVGDIAIVTKRTRIVDFTQPYIESGLVVV 569
Query: 456 VPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSF 515
P+ W FL+P T +W W+LEHR+N++FRGP +Q+ T
Sbjct: 570 APVTKLND-TPWAFLRPFTPPMWAVTAAFFLIVGSVIWILEHRINDEFRGPPRKQIVTIL 628
Query: 516 WFSFSTMVFSQRERVISNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKM 575
WFSFSTM FS RE +S L R V+++W FVVLI+T SY I V
Sbjct: 629 WFSFSTMFFSHRENTVSTLGRAVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIRGVDT 688
Query: 576 LIKRGDNVGYQKGSFVLG-ILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEI 634
LI VG+Q GS+ ++ +L +LV SP++ Q NG +AA DE
Sbjct: 689 LISSSGRVGFQVGSYAENYMIDELNIARSRLVPLGSPKEYAAALQ----NGTVAAIVDER 744
Query: 635 PYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 694
PY+ L + ++C +A+ +F +G+GF FP SPL D+S AIL ++E ++++I D W
Sbjct: 745 PYVDLFLSEFCG-FAIRGQEFTRSGWGFAFPRDSPLAIDMSTAILGLSETGQLQKIHDKW 803
Query: 695 FKKHSSCPDASTVVS---SRSLGLNSFW 719
+ S+C + + VS S L L SFW
Sbjct: 804 LSR-SNCSNLNGSVSDEDSEQLKLRSFW 830
>TAIR|locus:2081805 [details] [associations]
symbol:GLR3.6 "glutamate receptor 3.6" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230
EMBL:AL133452 GO:GO:0004965 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:BT004264 IPI:IPI00517161
PIR:T45779 RefSeq:NP_190716.3 UniGene:At.35384
ProteinModelPortal:Q84W41 EnsemblPlants:AT3G51480.1 GeneID:824311
KEGG:ath:AT3G51480 TAIR:At3g51480 InParanoid:Q84W41 OMA:FTKNGWG
PhylomeDB:Q84W41 ProtClustDB:CLSN2918557 Genevestigator:Q84W41
GermOnline:AT3G51480 Uniprot:Q84W41
Length = 903
Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
Identities = 248/730 (33%), Positives = 379/730 (51%)
Query: 6 IIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIY 65
+ + + ++PILSFSAT P+++ ++ P+F R S ND Q AI I++ +GWRE V IY
Sbjct: 110 VAHVATELKIPILSFSATDPTMSPLQFPFFIRTSQNDLFQMAAIADIVQFYGWREVVAIY 169
Query: 66 VDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP 125
D+ YG + +L D L R+ Y++ + P T + I L K+ ++R+ ++H
Sbjct: 170 GDDDYGRNGVAALGDRLSEKRCRISYKAALPPAPTRENITDLLIKVALSESRIIVVHASF 229
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEP---SVIDSMQGVIGVGPHVPKTK 182
G +F A +G+M+ G VWI T+ ++ ++ T P I+++QGVI + H P +
Sbjct: 230 IWGLELFNVARNLGMMSTGYVWIATNWLSTIIDTDSPLPLDTINNIQGVITLRLHTPNSI 289
Query: 183 ALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVE----KAGITSFGFDK- 237
+NF RW ++ V L+ + L AYD LA+A++ K G SF +
Sbjct: 290 MKQNFVQRWH--------NLTHVGLSTYALYAYDTVWLLAQAIDDFFKKGGNVSFSKNPI 341
Query: 238 -TNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFV-DGQLQSSAFEIINV-NN 294
+ + L+A + G L+++ GLTG F D L + AF+++NV
Sbjct: 342 ISELGGGNLHLDALKVFDGGKIFLESILQVDRIGLTGRMKFTSDRNLVNPAFDVLNVIGT 401
Query: 295 GARGVGFWTPEKGXXXXXXXXXXXXXXXXP----IIWPGDSTSDPKGWEVPTNEKKLRIG 350
G +G+W G ++WPG S P+GW N + LRIG
Sbjct: 402 GYTTIGYWFNHSGLSVMPADEMENTSFSGQKLHSVVWPGHSIKIPRGWVFSNNGRHLRIG 461
Query: 351 VPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSG 410
VP + F + V+V K+ +TG+CVDVF A I LPYAV ++ V +G +G +
Sbjct: 462 VPNRYRFEEVVSV----KSNG--MITGFCVDVFIAAINLLPYAVPFELVAFG--NGHDNP 513
Query: 411 SYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFL 470
S ++LV + G +DA VGDITI+ R+ DFT PY ESG+ ++ P++ +A FL
Sbjct: 514 SNSELVRLITTGVYDAGVGDITIITERTKMADFTQPYVESGLVVVAPVRKLGS-SAMAFL 572
Query: 471 QPLTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERV 530
+P T +W+ W LEH+ N++FRGP +QV T+FWFSFST+ FS RE
Sbjct: 573 RPFTPQMWLIAAASFLIVGAVIWCLEHKHNDEFRGPPRRQVITTFWFSFSTLFFSHRETT 632
Query: 531 ISNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSF 590
SNL RIV+I+W FVVLI+ SY I ++ L D +GY +GSF
Sbjct: 633 TSNLGRIVLIIWLFVVLIINSSYTASLTSILTVHQLSSPIKGIETLQTNHDPIGYPQGSF 692
Query: 591 VLG-ILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYA 649
V ++ +L +LV SPE+ + + G GG+AA DE Y++L + C ++
Sbjct: 693 VRDYLIHELNIHVSRLVPLRSPEEYDKALRDGPGKGGVAAVVDERAYIELFLSNRC-EFG 751
Query: 650 MIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVS 709
++ +F G+GF FP +SPL DVS AIL ++E M+ I D W + +C +
Sbjct: 752 IVGQEFTKNGWGFAFPRNSPLAVDVSAAILQLSENGDMQRIRDKWLLR-KACSLQGAEIE 810
Query: 710 SRSLGLNSFW 719
L L SFW
Sbjct: 811 VDRLELKSFW 820
>TAIR|locus:2062586 [details] [associations]
symbol:GLR5 "glutamate receptor 5" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC005700 GO:GO:0004965
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AF210701
IPI:IPI00548986 PIR:F84732 PIR:T51136 RefSeq:NP_565744.1
UniGene:At.13201 ProteinModelPortal:Q9SDQ4 SMR:Q9SDQ4 IntAct:Q9SDQ4
PaxDb:Q9SDQ4 PRIDE:Q9SDQ4 EnsemblPlants:AT2G32400.1 GeneID:817801
KEGG:ath:AT2G32400 GeneFarm:2534 TAIR:At2g32400 eggNOG:NOG282132
InParanoid:Q9SDQ4 OMA:NSSHRIQ PhylomeDB:Q9SDQ4
ProtClustDB:CLSN2688630 Genevestigator:Q9SDQ4 GermOnline:AT2G32400
Uniprot:Q9SDQ4
Length = 921
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 237/722 (32%), Positives = 368/722 (50%)
Query: 16 PILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMI 75
P++SF+AT P+L++++ P+F R + ND+ Q A+ +I +GW+E + +Y D++ G +
Sbjct: 121 PLVSFAATDPTLSALQFPFFLRTTPNDAHQMSALVDLINFYGWKEVISVYSDDELGRNGV 180
Query: 76 PSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKA 135
+L D L +R+ Y+ +S + + + L K ++ RV+ILH P RIF+ A
Sbjct: 181 SALDDELYKKRSRISYKVPLSVHSDEKFLTNALNKSKSIGPRVYILHFGPDPLLRIFDIA 240
Query: 136 NEIGLMNKGCVWIMTDGMTNLLRTL-EPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRN 194
++ +M VW+ TD ++ L +L + + ++GV+G+ H+P++ +E+F +
Sbjct: 241 QKLQMMTHEYVWLATDWLSVTLDSLSDKGTLKRLEGVVGLRQHIPESVKMEHFTHK---- 296
Query: 195 FLQENPSIVDVELNIFGLLAYDATRALAEAVEKA---GIT-SFGFDKTNVSRNATDL--E 248
LQ N S +N + L AYD +A +E+ GI +F + + + T L E
Sbjct: 297 -LQSNRS-----MNAYALHAYDTVWMIAHGIEELLNEGINITFSYSEKLLHARGTKLHLE 350
Query: 249 AFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQ-LQSSAFEIINVNN-GARGVGFWTPEK 306
+G LL+ L F G+ G F G+ + +EIINVN VGFW+
Sbjct: 351 KIKFFNSGELLLEKLLKVNFTGIAGQVQFGSGRNVIGCDYEIINVNKTDVHTVGFWSKNG 410
Query: 307 GXXXXXXXXXXXXXXXX--------PIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFS 358
G I WPG P+GW + + L+I VP + F
Sbjct: 411 GFSVVAPKTRHSQKKTSFVSDEKLGDITWPGGGREKPRGWVIADSADPLKIVVPRRVSFV 470
Query: 359 DFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQ 418
+FV + K + G+C+DVF ++ +PY+V Y F P+G +G SS +YN L+
Sbjct: 471 EFVT---EEKNSSHR-IQGFCIDVFIEALKFVPYSVPYIFEPFG--NGHSSPNYNHLIQM 524
Query: 419 VFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW 478
V G +DA VGDI IV +RS VDF+ PY +G+ +++P D W+FL+P T LW
Sbjct: 525 VTDGVYDAAVGDIAIVPSRSKLVDFSQPYASTGLVVVIPANDDNA--TWIFLRPFTSRLW 582
Query: 479 VTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLARIV 538
W+LEHR+NEDFRGP +Q+ T FSFST+ +E ISNLAR+V
Sbjct: 583 CVVLVSFLVIAVVIWILEHRINEDFRGPPRRQLSTMLLFSFSTLFKRNQEDTISNLARLV 642
Query: 539 VIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK-Q 597
+IVW F++++LT SY IT + L +GYQ G+F L L
Sbjct: 643 MIVWLFLLMVLTASYTANLTSILTVQQLPSAITGIDSLRASEVPIGYQAGTFTLEYLTYS 702
Query: 598 LGFDERKLVVYNSPEDCHELFQKGSVN-GGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFK 656
LG +LV +S E+ + + G N GG+AA DE+PY++L + + + EP F
Sbjct: 703 LGMARSRLVPLDSTEEYEKALKLGPTNWGGVAAIVDELPYIELFLAERTGFKIVGEP-FM 761
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
G+GF F SPL D+S AIL ++E K++EI W K + ++ L L
Sbjct: 762 HRGWGFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWLCKTNCAGKSNWNPEPNQLHLK 821
Query: 717 SF 718
SF
Sbjct: 822 SF 823
>TAIR|locus:2079681 [details] [associations]
symbol:GLR1.4 "glutamate receptor 1.4" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005261 "cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=IDA] [GO:0030003
"cellular cation homeostasis" evidence=RCA;IDA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC009853 GO:GO:0030003
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072066 EMBL:AY072067
IPI:IPI00529459 RefSeq:NP_187408.2 UniGene:At.40336
ProteinModelPortal:Q8LGN1 STRING:Q8LGN1 PaxDb:Q8LGN1 PRIDE:Q8LGN1
EnsemblPlants:AT3G07520.1 GeneID:819940 KEGG:ath:AT3G07520
TAIR:At3g07520 eggNOG:NOG295667 InParanoid:Q8LGN1 OMA:NENIGFF
PhylomeDB:Q8LGN1 ArrayExpress:Q8LGN1 Genevestigator:Q8LGN1
GermOnline:AT3G07520 Uniprot:Q8LGN1
Length = 861
Score = 675 (242.7 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
Identities = 171/506 (33%), Positives = 261/506 (51%)
Query: 206 ELNIFGLLAYDATRALAEAVEKAGITS-FGFDKT-NVSRNATDLEAFGISQNGPKLLQAL 263
EL+ F L + + L E V + + S + D +++R A + G+S LL+A+
Sbjct: 303 ELHNF-TLRWKRSLRLEEVVTRMSVCSIWAHDIAWSLARAAEVAKLPGLSVYD--LLEAI 359
Query: 264 -SSTRFKGLTGDYIFVDGQLQSSAFEIIN-VNNGARGVGFWTPEKGXXXXXXXXXXXXXX 321
S + KGL+GD F+D + S FEI+N + G R VG W
Sbjct: 360 PESAKHKGLSGDIKFIDKKFISDKFEIVNMIGRGERSVGLWN-SGSFISNRRRRLSSTKA 418
Query: 322 XXPIIWPGDSTSDPKGWEVPTN----EKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTG 377
IIWPG ST PK + +KKLR+ VP + V D KT T+ TG
Sbjct: 419 LETIIWPGGSTRIPKIRSLKEKRHGKKKKLRVLVPAGNITPQILEVKTDFKTGV-TAATG 477
Query: 378 YCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFL--GEFDAVVGDITIVF 435
YC+DVF+ I LP+ +++P+ P + +YNDLVY ++ ++DA VGDITI
Sbjct: 478 YCIDVFETSI--LPFNYEVEYIPW--PGAINYKNYNDLVYTLYSQKDKYDAAVGDITITD 533
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVL 495
NRS YVDFTLP+T+ G++++ +K ++ W+ +PLT LW+T W++
Sbjct: 534 NRSLYVDFTLPFTDMGLAVVT----AKDKSMWIIFKPLTLSLWLTIASFFILTGAIVWLI 589
Query: 496 EHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLARIVVIVWCFVVLILTQSYXX 555
E N DF+G QQ+GT F FST+VF+ RER+ N++R VVIVW F VLILT +Y
Sbjct: 590 ERHDNADFQGSCFQQIGTLLCFGFSTLVFAHRERLQHNMSRFVVIVWIFAVLILTSNYTA 649
Query: 556 XXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLG-FDERKLVVYNSPEDC 614
+ ++ L K +N+G+ S ++ F + + +D
Sbjct: 650 TLTSVMT-------VQQIRGL-KSNENIGFFSASIAANVVNDNPTFQGPRYKGLKTADD- 700
Query: 615 HELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDV 674
F NG I+ DE+PY+KL + ++ S++ ++E + T GFGF F SPLV V
Sbjct: 701 ---FTNALRNGTISFIVDEVPYVKLFVAKHPSEFVIVETESVTNGFGFAFQKGSPLVQKV 757
Query: 675 SKAILNVTEGDKMKEIEDAWFKKHSS 700
S+ I + +K+K IE+ WF++ ++
Sbjct: 758 SREIEKLRRTEKLKAIENWWFQRQTT 783
Score = 303 (111.7 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
Identities = 69/228 (30%), Positives = 116/228 (50%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWRE 60
++ + +LG K++VP++S SL+ + YF + + + SS+A I A+ F WR
Sbjct: 121 LEAKNLAELGEKTKVPVISSFQVPSSLSLAKYNYFIQATHDTSSEAKGIAALFSNFDWRT 180
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFI 120
AV IY D+ E I L Q + Y++ S + ++ I K+L K R+F+
Sbjct: 181 AVLIYEDDDDWRESIQPLVGHFQQNAIHIEYKAEFSVSSNEECIMKQLRKFKASGIRIFV 240
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHVPK 180
H+ + +R+F A +G+M +G WI+T N + + M+GVIG ++P
Sbjct: 241 AHISERIANRLFPCARRLGMMEEGYAWILTARSMNNFQDTNYLAKEEMEGVIGFKSYIPL 300
Query: 181 TKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKA 228
T+ L NF +RWKR+ E V +++ + A+D +LA A E A
Sbjct: 301 TEELHNFTLRWKRSLRLEE---VVTRMSVCSIWAHDIAWSLARAAEVA 345
Score = 38 (18.4 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 746 NVLKNSESSFLSRIRFFLKIFVSRDLSAHI 775
N L+N SF+ ++K+FV++ S +
Sbjct: 703 NALRNGTISFIVDEVPYVKLFVAKHPSEFV 732
>TAIR|locus:2166001 [details] [associations]
symbol:ATGLR1.2 species:3702 "Arabidopsis thaliana"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005217
"intracellular ligand-gated ion channel activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0016036
"cellular response to phosphate starvation" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042631
"cellular response to water deprivation" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072064 EMBL:AY072065
IPI:IPI00536526 IPI:IPI00547562 RefSeq:NP_199651.1
RefSeq:NP_851155.1 UniGene:At.29852 ProteinModelPortal:Q9LV72
IntAct:Q9LV72 PRIDE:Q9LV72 EnsemblPlants:AT5G48400.2 GeneID:834895
KEGG:ath:AT5G48400 TAIR:At5g48400 eggNOG:NOG313824
InParanoid:Q9LV72 OMA:FNANEDY PhylomeDB:Q9LV72
Genevestigator:Q9LV72 GermOnline:AT5G48400 Uniprot:Q9LV72
Length = 867
Score = 696 (250.1 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 169/514 (32%), Positives = 259/514 (50%)
Query: 259 LLQALSSTRFKGLTGDYIFVDGQLQSSAFEIIN-VNNGARGVGFWTPEKGXXXXXXXXXX 317
LL+A+ +RFKGL+G++ D +L S FEI+N + +G R VGFW G
Sbjct: 353 LLEAIKESRFKGLSGNFQLDDMKLLSDKFEIVNMIGSGERRVGFWN-SNGSFSNRRQLSS 411
Query: 318 XXXXXXPIIWPGDSTSDPKGWEV-PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT 376
IIWPG S PKG + + KKLR+ V F + V DP T E T V
Sbjct: 412 THDNLETIIWPGGSAQSPKGRSLRESGRKKLRVLVTSSNRFPRLMKVETDPITHEITIVE 471
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFL--GEFDAVVGDITIV 434
G+C++VF+A I Y V Y + + +G++ Y L Y + ++DA VGDITI
Sbjct: 472 GFCIEVFQASIAPFNYEVEY--IRW--LNGTN---YTKLAYALHSQKDKYDAAVGDITIT 524
Query: 435 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWV 494
+RS YVDFTLPYTE G+ ++ +K+R+ WVF QPLT +LW+T W+
Sbjct: 525 SDRSMYVDFTLPYTEMGLGIVA----AKERSMWVFFQPLTPNLWITSAAFFVLTGIIVWL 580
Query: 495 LEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLARIVVIVWCFVVLILTQSYX 554
+E N++F+G QQ+G WF FST+V++ RE++ NL+R VV VW F VLIL SY
Sbjct: 581 IERAENKEFQGSWPQQIGVVIWFGFSTLVYAHREKLQHNLSRFVVTVWVFAVLILVTSYT 640
Query: 555 XXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGI-LKQLGFDERKLVVYNSPED 613
+ ++ D VG+ GS + L +L+ N+ ED
Sbjct: 641 ATLTSMMT-------VQQIRFNANE-DYVGHLSGSLIANAALTNSSLRAMRLLGLNTSED 692
Query: 614 CHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHD 673
+ + +N ++ E+PY+K+L+G+ + M++ + T GFGF+F S L +
Sbjct: 693 ----YAQALMNKSVSYIVSELPYLKILLGENPGHFLMVKTQSTTNGFGFMFQKGSELAPN 748
Query: 674 VSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXX 733
VS+ I + +++ E+E WF K P +T +S + L F
Sbjct: 749 VSREIAKLRTSERLNEMERRWFDKQ--LP-YTTDDTSNPITLYRFRGLFMITGVSFAFAL 805
Query: 734 XXXMAVFIHQHWNVLKNSESSFLS-RIRFFLKIF 766
+ +++ + W +L NS + + S R+R F +F
Sbjct: 806 AVLLILWLRERWEILVNSVNIYFSQRLRHFRILF 839
Score = 269 (99.8 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 60/230 (26%), Positives = 122/230 (53%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSP-SLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWR 59
++ + +LG K++VP++S + SP SL+ + + + + N +S+ ITA + F W
Sbjct: 115 LEAKLLAELGEKARVPVISLN--SPMSLSLSKYTHLIQATHNSASEVKGITAFLHGFDWN 172
Query: 60 EAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVF 119
+ D+ E + + D + V + S +++D + L +L + T VF
Sbjct: 173 SVALVLEDHDDWRESMHFMVDHFHENNVHVQSKVAFSVTSSEDSLMDRLRELKDLGTTVF 232
Query: 120 ILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLL-RTLEPSVIDSMQGVIGVGPH 177
++H+ + +R+F A ++G+M +G WI+T M++ + ++ ++M+GV+G +
Sbjct: 233 VVHLSEVIATRLFPCAEKLGMMGEGFAWILTSRSMSSFHDQFIDDLTKEAMEGVVGFKSY 292
Query: 178 VPKTKALENFRVRWKRNFLQENPSIVDV-ELNIFGLLAYDATRALAEAVE 226
+P +K L NF +RW++ E + ++ L+I G+ A+D +LA A E
Sbjct: 293 IPMSKELHNFTLRWRKTLPVEEVTGSEITRLSISGVWAHDVAWSLASAAE 342
>TAIR|locus:2166006 [details] [associations]
symbol:GLR1.3 "glutamate receptor 1.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 ProtClustDB:CLSN2684267
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AY091121 EMBL:AY142599 IPI:IPI00522082 RefSeq:NP_199652.1
UniGene:At.66754 UniGene:At.70447 ProteinModelPortal:Q9FH75
PRIDE:Q9FH75 EnsemblPlants:AT5G48410.1 GeneID:834896
KEGG:ath:AT5G48410 TAIR:At5g48410 eggNOG:NOG270167
InParanoid:Q9FH75 OMA:FRASISP PhylomeDB:Q9FH75
Genevestigator:Q9FH75 GermOnline:AT5G48410 Uniprot:Q9FH75
Length = 860
Score = 668 (240.2 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 170/514 (33%), Positives = 257/514 (50%)
Query: 259 LLQALSSTRFKGLTGDYIFVDGQLQSSAFEIIN-VNNGARGVGFWTPEKGXXXXXXXXXX 317
LL+ ++ TRF GL+GD+ D +L S+ FEIIN + + R VGF G
Sbjct: 351 LLEEITKTRFNGLSGDFQLNDKKLLSNKFEIINMIGSSERRVGFLN-SNGSFSNRRHLSS 409
Query: 318 XXXXXXPIIWPGDSTSDPKGWE-VPTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT 376
IIWPG S PKG + ++ KKLR+ V F + V DP T E V
Sbjct: 410 THNKLETIIWPGGSAQSPKGTSLIDSDRKKLRVLVTSSNRFPRLMKVETDPVTNE-LIVE 468
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFL--GEFDAVVGDITIV 434
G+C++VF+A I Y V Y +P+ +GS+ Y++L Y + ++DA VGDITI
Sbjct: 469 GFCIEVFRASISPFNYEVEY--IPW--LNGSN---YDNLAYALHSQKDKYDAAVGDITIT 521
Query: 435 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWV 494
NRS YVDFTLP+TE G+ IV +K+ R+ WVF QPLT DLW+T W+
Sbjct: 522 SNRSTYVDFTLPFTEMGLG-IVAVKE---RSMWVFFQPLTPDLWITSAFFFVLTGVIVWL 577
Query: 495 LEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLARIVVIVWCFVVLILTQSYX 554
+E N++F+G QQ+G WF FST+V++ RE++ NL+R VV VW F VLILT SY
Sbjct: 578 IERAENKEFQGSWPQQIGVVLWFGFSTLVYAHREKLKHNLSRFVVTVWVFAVLILTASYT 637
Query: 555 XXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGI-LKQLGFDERKLVVYNSPED 613
+ ++ D VG+ GS + + L + + NS D
Sbjct: 638 ATLTSMMT-------VQQIRFNSNE-DYVGHLSGSLIANVALTSSSLRAMRSLGLNSAAD 689
Query: 614 CHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHD 673
+ + +N ++ DE+PY+K+++G+ + + M++ + T GFGF+F LV +
Sbjct: 690 ----YAQALLNKTVSFVVDELPYLKVVLGENPTHFFMVKTQSTTNGFGFMFQKGFELVPN 745
Query: 674 VSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXX 733
VS+ I + +K+ E+E WF + P +T +S + L F
Sbjct: 746 VSREISKLRTSEKLNEMEKRWFD--NQLP-YTTDDTSNPITLYRFRGLFIIIGVSFAFAL 802
Query: 734 XXXMAVFIHQHWNVLKNSESSFLSRIRFFLKIFV 767
+ + + W +L ++ R+R F FV
Sbjct: 803 AVLVILCLRDKWEILVDN-LDLSQRLRHFRIHFV 835
Score = 264 (98.0 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 62/228 (27%), Positives = 117/228 (51%)
Query: 1 MQTNFIIQLGNKSQVPILSFSATSP-SLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWR 59
++ + +LG K++VP++S SP SL+ + + + + + +S+A IT+ I F W
Sbjct: 117 LEAKLLGELGEKARVPMISLD--SPFSLSLSKYTHLIQATHDSTSEAKGITSFINVFDWN 174
Query: 60 EAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVF 119
+Y D+ E + L + RV + + +++D + L +L + T VF
Sbjct: 175 SVALVYEDHDDWRESMQLLVEHFHENGVRVQSKVGFTVSSSEDFVMGRLQQLKDLGTTVF 234
Query: 120 ILHMLPSLGSRIFEKANEIGLMNKGCVWIMT-DGMTNLLRTLEPSVIDSMQGVIGVGPHV 178
++H+ + + +F A +GLM G VWI+T M + ++ +M+GV+G ++
Sbjct: 235 VVHLSEVIATHLFPCARRLGLMGDGFVWILTAKTMNSFHENIDDFTKQAMEGVVGFKSYI 294
Query: 179 PKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVE 226
P + L+NF +RW+++ E + L+I G+ A+D ALA A E
Sbjct: 295 PMSIELQNFTLRWRKSLPVEEAELT--RLSISGIWAHDIAFALARAAE 340
>TAIR|locus:2102975 [details] [associations]
symbol:GLR1.1 "glutamate receptor 1.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0005261
"cation channel activity" evidence=IDA] [GO:0005262 "calcium
channel activity" evidence=IDA] [GO:0005267 "potassium channel
activity" evidence=IDA] [GO:0005272 "sodium channel activity"
evidence=IDA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA] [GO:0030003 "cellular cation
homeostasis" evidence=RCA;IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0070838 "divalent metal ion transport"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009738
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0005267 GO:GO:0005272 InterPro:IPR001828 EMBL:AC016829
GO:GO:0071230 GO:GO:0030003 GO:GO:0005234 EMBL:AF079998
EMBL:AK117584 IPI:IPI00529222 PIR:T51138 RefSeq:NP_187061.1
UniGene:At.18800 ProteinModelPortal:Q9M8W7 STRING:Q9M8W7
TCDB:1.A.10.1.7 EnsemblPlants:AT3G04110.1 GeneID:819566
KEGG:ath:AT3G04110 GeneFarm:2528 TAIR:At3g04110 eggNOG:NOG253648
HOGENOM:HOG000239558 InParanoid:Q9M8W7 KO:K05387 OMA:IRFSENE
PhylomeDB:Q9M8W7 ProtClustDB:CLSN2684267 Genevestigator:Q9M8W7
GermOnline:AT3G04110 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 Uniprot:Q9M8W7
Length = 808
Score = 402 (146.6 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 94/233 (40%), Positives = 129/233 (55%)
Query: 325 IIWPGDSTSDPKGWEVPTN-EKK-LRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDV 382
I+WPG S P+ + EKK LR+ V V+V DP+T T V+G+CV+V
Sbjct: 399 IVWPGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPETGVNT-VSGFCVEV 457
Query: 383 FKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFL--GEFDAVVGDITIVFNRSNY 440
FK I P+ +F+PY G+ ++L Y + ++DA VGDITI NRS Y
Sbjct: 458 FKTCIA--PFNYELEFIPY-------RGNNDNLAYLLSTQRDKYDAAVGDITITSNRSLY 508
Query: 441 VDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEHRVN 500
VDFTLPYT+ G+ I+ +K K + W F P LW+ W++E VN
Sbjct: 509 VDFTLPYTDIGIG-ILTVK-KKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSVN 566
Query: 501 EDFRGPAGQQVGTSFWFSFSTMVFSQRERVISNLARIVVIVWCFVVLILTQSY 553
+F+G GQQ+ WF FST+VF+ RE++ +R +VIVW FVVLILT SY
Sbjct: 567 PEFQGSWGQQLSMMLWFGFSTIVFAHREKLQKMSSRFLVIVWVFVVLILTSSY 619
Score = 228 (85.3 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 67/248 (27%), Positives = 123/248 (49%)
Query: 2 QTNFIIQLGNKSQVPILSFSATSPSLTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWRE 60
+ + + K++VP++S P+ S++ F + + + +S+A IT++I+ F +
Sbjct: 106 EAKLLATISEKAKVPVIS--TFLPNTLSLKKYDNFIQWTHDTTSEAKGITSLIQDFSCKS 163
Query: 61 AVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT--DDQIEKELYKLFTMQTRV 118
V IY D E + L + Q + RS +++ ++ + +L KL + V
Sbjct: 164 VVVIYEDADDWSESLQILVENFQDKGIYIA-RSASFAVSSSGENHMMNQLRKLKVSRASV 222
Query: 119 FILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHV 178
F++HM L SR+F+ ++GLM + WI+T N L ++ SMQGVIG ++
Sbjct: 223 FVVHMSEILVSRLFQCVEKLGLMEEAFAWILTARTMNYLEHF--AITRSMQGVIGFKSYI 280
Query: 179 PKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKT 238
P ++ ++NF R ++ + + + I GL A+D LA AVEK ++ +
Sbjct: 281 PVSEEVKNFTSRLRKRMGDDTET--EHSSVIIGLRAHDIACILANAVEKFSVSGKVEASS 338
Query: 239 NVSRNATD 246
NVS + D
Sbjct: 339 NVSADLLD 346
Score = 179 (68.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 66/201 (32%), Positives = 91/201 (45%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRF 268
I GL A+D LA AVEK ++ K S N +S + LL + +RF
Sbjct: 309 IIGLRAHDIACILANAVEKFSVSG----KVEASSN--------VSAD---LLDTIRHSRF 353
Query: 269 KGLTGDYIFVDGQLQSSAFEIINVNNGA-RGVGFWTPEKGXXXXXXXXXXXXXXXXPIIW 327
KGL+GD D + S FEI+N+ R +G W+ G I+W
Sbjct: 354 KGLSGDIQISDNKFISETFEIVNIGREKQRRIGLWS---GGSFSQRRQ---------IVW 401
Query: 328 PGDSTSDPKGWEVPTN-EKK-LRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKA 385
PG S P+ + EKK LR+ V V+V DP+T T V+G+CV+VFK
Sbjct: 402 PGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPETGVNT-VSGFCVEVFKT 460
Query: 386 VIQELPYAVAYDFVPY-GQPD 405
I P+ +F+PY G D
Sbjct: 461 CIA--PFNYELEFIPYRGNND 479
Score = 140 (54.3 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 604 KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFV 663
KL N+ E +L + G++N I +EIPY+ +LIG Y + + M + T GFGF+
Sbjct: 650 KLGSINAVEAYAQLLRDGTLNHVI----NEIPYLSILIGNYPNDFVMTDRVTNTNGFGFM 705
Query: 664 FPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSS 700
F S LV VS+ I + +K++E WF+K S
Sbjct: 706 FQKGSDLVPKVSREIAKLRSLGMLKDMEKKWFQKLDS 742
Score = 40 (19.1 bits), Expect = 9.3e-44, Sum P(3) = 9.3e-44
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 221 LAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQN 255
L + VEK G+ F +R LE F I+++
Sbjct: 235 LFQCVEKLGLMEEAFAWILTARTMNYLEHFAITRS 269
Score = 37 (18.1 bits), Expect = 1.9e-43, Sum P(3) = 1.9e-43
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 325 IIWPGDSTSDPKG 337
I W D+TS+ KG
Sbjct: 139 IQWTHDTTSEAKG 151
>MGI|MGI:95816 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10090 "Mus musculus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007196 "adenylate
cyclase-inhibiting G-protein coupled glutamate receptor signaling
pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling
pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate
receptor signaling pathway" evidence=ISO] [GO:0008066 "glutamate
receptor activity" evidence=ISO] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95816 GO:GO:0005886
GO:GO:0005887 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203
OMA:EEQAFRF GO:GO:0001640 EMBL:AL607090 EMBL:AL627328 EMBL:BC118004
EMBL:AF245444 IPI:IPI00120318 IPI:IPI00986627 RefSeq:NP_001074566.1
UniGene:Mm.40896 ProteinModelPortal:B1AS29 SMR:B1AS29 STRING:B1AS29
PaxDb:B1AS29 PRIDE:B1AS29 DNASU:14807 Ensembl:ENSMUST00000030676
GeneID:14807 KEGG:mmu:14807 UCSC:uc008usa.2 InParanoid:B1AS29
ChiTaRS:GRIK3 NextBio:286987 Bgee:B1AS29 Genevestigator:B1AS29
Uniprot:B1AS29
Length = 919
Score = 147 (56.8 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N +V ++ + D V +TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 642 WWFFTLIIISSY 653
Score = 114 (45.2 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 70/316 (22%), Positives = 138/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI ++++ WR A
Sbjct: 118 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQSLKWRSAT 176
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + P+ +DD + KE+ + + R+ I
Sbjct: 177 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLLKEMKR--GREFRI-I 230
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 231 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 289
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 290 PHV--SAIVE----KWAMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 337
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 338 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P G
Sbjct: 398 KEDGLEKVGVWSPADG 413
Score = 111 (44.1 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 51/253 (20%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 733 DYALLMESTTIEYITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + FI++
Sbjct: 792 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLRK 849
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 850 TAEREQRSFCSTV 862
>UNIPROTKB|F1MCM2 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting
G-protein coupled glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:DAAA02009187 IPI:IPI00709026
Ensembl:ENSBTAT00000012214 Uniprot:F1MCM2
Length = 881
Score = 146 (56.5 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 46/192 (23%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N ++ ++ + D V +TI
Sbjct: 426 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 483
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 484 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 543
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 544 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 603
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 604 WWFFTLIIISSY 615
Score = 116 (45.9 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 71/316 (22%), Positives = 138/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 80 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 138
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + PL +DD + KE+ + + R+ I
Sbjct: 139 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLLKEMKR--GREFRI-I 192
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 193 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 251
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 252 PHV--SAIVE----KWSMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 299
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 300 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 359
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P +G
Sbjct: 360 KEDGLEKVGVWSPAEG 375
Score = 109 (43.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/253 (19%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 575 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 634
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 635 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 694
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 695 DYALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 753
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + F+++
Sbjct: 754 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRK 811
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 812 TAEREQRSFCSTV 824
>UNIPROTKB|F1SV43 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015277 "kainate selective glutamate receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting G-protein
coupled glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GeneTree:ENSGT00590000083056 OMA:EEQAFRF GO:GO:0001640
EMBL:FP104549 Ensembl:ENSSSCT00000004036 Uniprot:F1SV43
Length = 881
Score = 146 (56.5 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 46/192 (23%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N ++ ++ + D V +TI
Sbjct: 426 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 483
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 484 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 543
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 544 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 603
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 604 WWFFTLIIISSY 615
Score = 116 (45.9 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 71/316 (22%), Positives = 138/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 80 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 138
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + PL +DD + KE+ + + R+ I
Sbjct: 139 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLLKEMKR--GREFRI-I 192
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 193 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 251
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 252 PHV--SAIVE----KWSMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 299
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 300 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 359
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P +G
Sbjct: 360 KEDGLEKVGVWSPAEG 375
Score = 109 (43.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/253 (19%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 575 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 634
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 635 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 694
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 695 DYALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 753
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + F+++
Sbjct: 754 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRK 811
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 812 TAEREQRSFCSTV 824
>UNIPROTKB|F1P0L4 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001640
"adenylate cyclase inhibiting G-protein coupled glutamate receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:AADN02043882 EMBL:AADN02043883
IPI:IPI00577160 ProteinModelPortal:F1P0L4
Ensembl:ENSGALT00000003274 Uniprot:F1P0L4
Length = 891
Score = 144 (55.7 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 48/192 (25%), Positives = 81/192 (42%)
Query: 377 GYCVDVFK--AVIQELPYAVAY-DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K AVI Y + + YG D G +N ++ ++ + D V +TI
Sbjct: 436 GYCIDLLKELAVILGFTYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 493
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 494 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSCVLF 553
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P V SFWF ++ E + L+ RI+ +
Sbjct: 554 VIARFSPYEWYDAHPCNPGSDIVENNFTLFNSFWFGMGALMQQGSELMPKALSTRIIGGI 613
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 614 WWFFTLIIISSY 625
Score = 117 (46.2 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 72/317 (22%), Positives = 135/317 (42%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 90 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 148
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + PL TDD + KE+ + + R+ I
Sbjct: 149 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDTDDARPLLKEMKR--GREFRI-I 202
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
+ ++I +A +G+M + +I T + LEP ++ G ++ V
Sbjct: 203 FDCSHLMAAQILRQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVEN 261
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIF-GLLAYDATRALAEAVEKAGITSFG 234
PHV + +E +W LQ P EL + G++ DA L +AV + S
Sbjct: 262 PHV--SSIIE----KWAMERLQSAPK---AELGLLDGVMMTDAA-LLYDAVH---VVSVC 308
Query: 235 FDKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIIN 291
+ + ++ N+ + G + + + +++GLTG +F G +II+
Sbjct: 309 YQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKSSGLRTDFDLDIIS 368
Query: 292 VN-NGARGVGFWTPEKG 307
+ +G VG W P G
Sbjct: 369 LKEDGLEKVGTWNPSNG 385
Score = 110 (43.8 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 50/253 (19%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RI+ +W F LI+ SY I
Sbjct: 585 SFWFGMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 644
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 645 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPTALVKNNEEGIQRTLTA 704
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ + + G+G P+ SP ++ AIL + E DK
Sbjct: 705 DYALLMESTTIEYITQRNCN-LTQVGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 763
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ + CP+ +S +LG+ + M FI++
Sbjct: 764 LHVMKEKWWRGNG-CPEDENKEAS-ALGIQNIGGIFIVLAAGLVLSVFVAMVEFIYKLRK 821
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 822 TAEREQRSFCSAV 834
>UNIPROTKB|F1PWT6 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203 EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 RefSeq:XP_850331.3 Ensembl:ENSCAFT00000005371
GeneID:608269 KEGG:cfa:608269 Uniprot:F1PWT6
Length = 919
Score = 146 (56.5 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 46/192 (23%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N ++ ++ + D V +TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 521
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 642 WWFFTLIIISSY 653
Score = 116 (45.9 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 71/316 (22%), Positives = 138/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 118 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 176
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + PL +DD + KE+ + + R+ I
Sbjct: 177 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLLKEMKR--GREFRI-I 230
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 231 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 289
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 290 PHV--SAIVE----KWSMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 337
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 338 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P +G
Sbjct: 398 KEDGLEKVGVWSPAEG 413
Score = 109 (43.4 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 50/253 (19%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 733 DYALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + F+++
Sbjct: 792 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRK 849
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 850 TAEREQRSFCSTV 862
>UNIPROTKB|Q13003 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0007215 "glutamate receptor signaling
pathway" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042391 "regulation of membrane potential"
evidence=ISS;IDA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISS;IDA] [GO:0030424 "axon" evidence=ISS]
[GO:0032839 "dendrite cytoplasm" evidence=ISS] [GO:0043195
"terminal bouton" evidence=ISS] [GO:0043204 "perikaryon"
evidence=ISS] [GO:0007216 "G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS;IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005887 EMBL:CH471059
GO:GO:0051967 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 DrugBank:DB00142 GO:GO:0042391
GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH EMBL:U16127 EMBL:U16128 EMBL:AL355386
EMBL:AC117945 EMBL:S69349 IPI:IPI00011397 PIR:I59604
RefSeq:NP_000822.2 UniGene:Hs.128848 ProteinModelPortal:Q13003
SMR:Q13003 STRING:Q13003 PhosphoSite:Q13003 DMDM:212276502
PaxDb:Q13003 PRIDE:Q13003 DNASU:2899 Ensembl:ENST00000373091
GeneID:2899 KEGG:hsa:2899 UCSC:uc001caz.2 CTD:2899
GeneCards:GC01M037261 H-InvDB:HIX0028621 HGNC:HGNC:4581
HPA:HPA014709 MIM:138243 neXtProt:NX_Q13003 PharmGKB:PA28975
InParanoid:Q13003 KO:K05203 OMA:EEQAFRF PhylomeDB:Q13003
BindingDB:Q13003 ChEMBL:CHEMBL3684 GenomeRNAi:2899 NextBio:11475
ArrayExpress:Q13003 Bgee:Q13003 CleanEx:HS_GRIK3
Genevestigator:Q13003 GermOnline:ENSG00000163873 GO:GO:0001640
Uniprot:Q13003
Length = 919
Score = 147 (56.8 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N +V ++ + D V +TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 642 WWFFTLIIISSY 653
Score = 111 (44.1 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 50/253 (19%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 733 DYALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + F+++
Sbjct: 792 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRK 849
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 850 TAEREQRSFCSTV 862
Score = 111 (44.1 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 70/316 (22%), Positives = 137/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 118 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 176
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + P+ +DD + KE+ + + R+ I
Sbjct: 177 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLLKEMKR--GREFRI-I 230
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 231 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 289
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 290 PHV--SAIVE----KWSMERLQAAPRSESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 337
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 338 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P G
Sbjct: 398 KEDGLEKVGVWSPADG 413
>UNIPROTKB|Q38PU2 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9541 "Macaca fascicularis" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISS] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0007196 "adenylate cyclase-inhibiting G-protein
coupled glutamate receptor signaling pathway" evidence=ISS]
[GO:0007216 "G-protein coupled glutamate receptor signaling
pathway" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043197
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
HSSP:P22756 GO:GO:0001640 EMBL:DQ159935 ProteinModelPortal:Q38PU2
SMR:Q38PU2 Uniprot:Q38PU2
Length = 919
Score = 147 (56.8 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N +V ++ + D V +TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 642 WWFFTLIIISSY 653
Score = 111 (44.1 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 50/253 (19%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 733 DYALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + F+++
Sbjct: 792 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRK 849
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 850 TAEREQRSFCSTV 862
Score = 111 (44.1 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 70/316 (22%), Positives = 137/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 118 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 176
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + P+ +DD + KE+ + + R+ I
Sbjct: 177 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PVDSDDSRPLLKEMKR--GREFRI-I 230
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 231 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 289
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 290 PHV--SAIVE----KWSMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 337
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 338 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P G
Sbjct: 398 KEDGLEKVGVWSPADG 413
>RGD|71027 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005887
"integral to plasma membrane" evidence=IEA;ISO] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor
signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled
glutamate receptor signaling pathway" evidence=ISO] [GO:0007268
"synaptic transmission" evidence=NAS] [GO:0008066 "glutamate
receptor activity" evidence=IDA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA;ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0032839 "dendrite cytoplasm" evidence=IDA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477
PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N
PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94
PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264 SMR:P42264
STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 147 (56.8 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N +V ++ + D V +TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 642 WWFFTLIIISSY 653
Score = 111 (44.1 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 51/253 (20%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 733 DYALLMESTTIEYITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + FI++
Sbjct: 792 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLRK 849
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 850 TAEREQRSFCSTV 862
Score = 106 (42.4 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 69/316 (21%), Positives = 138/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI ++++ WR A
Sbjct: 118 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQSLKWRSAT 176
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + P+ +DD + KE+ + + R+ I
Sbjct: 177 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLLKEMKR--GREFRI-I 230
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 231 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 289
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
HV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 290 AHV--SAIVE----KWSMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 337
Query: 236 DKTN-VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ + ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 338 QRASQMTVNSLQCHRHKPWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P G
Sbjct: 398 KEDGLEKVGVWSPADG 413
>UNIPROTKB|P42264 [details] [associations]
symbol:Grik3 "Glutamate receptor ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2
UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94
PDB:4E0W PDB:4G8N PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93
PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264
SMR:P42264 STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 147 (56.8 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N +V ++ + D V +TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 642 WWFFTLIIISSY 653
Score = 111 (44.1 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 51/253 (20%), Positives = 96/253 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 733 DYALLMESTTIEYITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHWN 746
+ +++ W++ S CP+ +S +LG+ + FI++
Sbjct: 792 LHIMKEKWWRG-SGCPEEENKEAS-ALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLRK 849
Query: 747 VLKNSESSFLSRI 759
+ + SF S +
Sbjct: 850 TAEREQRSFCSTV 862
Score = 106 (42.4 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 69/316 (21%), Positives = 138/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI ++++ WR A
Sbjct: 118 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQSLKWRSAT 176
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + P+ +DD + KE+ + + R+ I
Sbjct: 177 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLLKEMKR--GREFRI-I 230
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 231 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 289
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
HV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 290 AHV--SAIVE----KWSMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 337
Query: 236 DKTN-VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ + ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 338 QRASQMTVNSLQCHRHKPWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P G
Sbjct: 398 KEDGLEKVGVWSPADG 413
>ZFIN|ZDB-GENE-030616-53 [details] [associations]
symbol:gria3b "glutamate receptor, ionotrophic, AMPA
3b" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030616-53 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 HOVERGEN:HBG051839 KO:K05199 OMA:MVQQFLQ
OrthoDB:EOG4XKV68 EMBL:AL732632 EMBL:BX511226 EMBL:BX539334
EMBL:AF525746 IPI:IPI00510089 RefSeq:NP_938174.1 UniGene:Dr.14975
SMR:Q71E60 Ensembl:ENSDART00000043180 GeneID:368416 KEGG:dre:368416
CTD:368416 InParanoid:Q71E60 NextBio:20812912 Uniprot:Q71E60
Length = 883
Score = 161 (61.7 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 63/253 (24%), Positives = 104/253 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + S+N +V ++ G D V +TI
Sbjct: 443 GYCVDLASEIAKHVGIKYRLSIVMDGKYGARDPETK-SWNGMVGELVYGRADIAVAPLTI 501
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 502 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 561
Query: 494 VL------EHRVNE-----DFRGPAGQQ----VGTSFWFSFSTMVFSQRERVIS--NLA- 535
++ E +++E D + P + S WFS F Q+ IS +L+
Sbjct: 562 LVSRFSPYEWQLDETDEVKDPQTPPDPPNDFGIFNSLWFSLGA--FMQQGCDISPRSLSG 619
Query: 536 RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGIL 595
RIV VW F LI+ SY I + L K+ + + Y G+ G
Sbjct: 620 RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGST 676
Query: 596 KQLGFDERKLVVY 608
K+ F K+ VY
Sbjct: 677 KEF-FRRSKIAVY 688
Score = 140 (54.3 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 58/260 (22%), Positives = 116/260 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ-IE 105
GA+ +++ + W + V +Y D G ++ ++ +A A + +V RSV S TD Q
Sbjct: 137 GAVLSLLSHYKWDKFVYLY-DTDRGFSILQAIMEAAVANNWQVTARSVGS--ITDPQEFR 193
Query: 106 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSV 164
+ + ++ Q + +++ + I E+ +G ++G +I+ + G TN+ +L+
Sbjct: 194 RIIEEMDRRQEKRYLIDCEVDRINVILEQVVTLGKNSRGYHYIIANLGFTNI--SLDKVF 251
Query: 165 IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEA 224
+ + G P+ ++ F RW R +E P + L L+YDA +AEA
Sbjct: 252 LGGAN-ISGFQIINPENLVVQQFLQRWDRLDEREFPEAKNTPLKYTSALSYDAILVIAEA 310
Query: 225 VEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQ 283
+ + + A SQ G + +AL + +G+TG+ F G+
Sbjct: 311 FRYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDSFGRRT 369
Query: 284 SSAFEIINVNNGA-RGVGFW 302
+ ++ + G R +G+W
Sbjct: 370 NYTIDVYEMKTGGPRKIGYW 389
Score = 82 (33.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 655 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFAKTTPDG 710
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 711 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLA 770
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGEC 794
>UNIPROTKB|F1P2J9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00586084
ProteinModelPortal:F1P2J9 Ensembl:ENSGALT00000040369 Uniprot:F1P2J9
Length = 880
Score = 188 (71.2 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 86/378 (22%), Positives = 151/378 (39%)
Query: 350 GVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF--KAVIQELPYAV--AYD--FVPYGQ 403
G PVKK F N TI + G+C+D+ A + Y V D F +
Sbjct: 343 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 402
Query: 404 PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 463
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 403 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 461
Query: 464 RNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTSFW 516
F+QP LW+ ++L+ +VN + + ++ W
Sbjct: 462 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 521
Query: 517 FSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK 574
FS+ ++ S E + ARI+ +VW +I+ SY IT +
Sbjct: 522 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 581
Query: 575 --MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGI 627
L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 582 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLH 640
Query: 628 AAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKM 687
A +D ++ Q C E F++ GFG SP +VS AIL E M
Sbjct: 641 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 698
Query: 688 KEIEDAWFKKHSSCPDAS 705
++++ W + + C S
Sbjct: 699 EDLDKTWVR-YQECDSRS 715
Score = 80 (33.2 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 45/172 (26%), Positives = 72/172 (41%)
Query: 216 DATRALAEAVEKAGITSFGFDKTNVSRNATDLEA-FGISQNGPKLLQALSSTRF-KGLTG 273
DA +A+AV F+K N++ I + GP + L S+++ +G+TG
Sbjct: 198 DAVAVVAQAVHDL------FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTG 251
Query: 274 DYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDS 331
F DG + + + I+N+ N VG + IIWPG
Sbjct: 252 RVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGE 300
Query: 332 TSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF 383
T P+G+++ T KL+I V + + FV V +PT G C + F
Sbjct: 301 TEKPQGYQMST---KLKI-VTIHQ--EPFVYV-------KPTQADGTCREEF 339
Score = 75 (31.5 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 33/156 (21%), Positives = 63/156 (40%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P++ + T S+ S +S + F R S QA +++ F W + I D+ G
Sbjct: 30 RIPVIGLT-TRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEG 88
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
L L+ +++ P T + + L + ++ RV IL + +
Sbjct: 89 RAAQKKLETLLEERESKAEKVLQFDP-GTKN-VTSLLLEAKELEARVIILSASEDDAATV 146
Query: 132 FEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVI 165
+ A + + G VW++ + N LR VI
Sbjct: 147 YRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVI 182
>UNIPROTKB|F1M4B0 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
IPI:IPI00952320 ProteinModelPortal:F1M4B0
Ensembl:ENSRNOT00000067147 ArrayExpress:F1M4B0 Uniprot:F1M4B0
Length = 895
Score = 152 (58.6 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 423 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 482
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 483 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 542
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 543 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 602
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 603 FFTLIIISSY 612
Score = 95 (38.5 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 50/259 (19%), Positives = 94/259 (36%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 572 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 631
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 632 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVL 690
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 691 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 750
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ + +S +LG+ + + F+++
Sbjct: 751 KLHMMKEKWWRGNG-CPEEDSKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSR 808
Query: 746 NVLKNSESSFLSRIRFFLK 764
+ SR+RF+ +
Sbjct: 809 KNNDVEQKGKSSRLRFYFR 827
Score = 91 (37.1 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 63/306 (20%), Positives = 121/306 (39%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ S R ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 85 NALEVPHIQTRWKHPSVDS-RDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDST- 142
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP-SLGS 129
G + L A + ++ R + P A D K L K +++ +
Sbjct: 143 GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KPLLKEMKKSKEFYVIFDCSHETAA 198
Query: 130 RIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVPKTKAL 184
I ++ +G+M + + T D L S ++ M G ++ + PHV + +
Sbjct: 199 EILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV--SSII 255
Query: 185 ENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
E +W LQ P + L + G++ +A + +AV I S + VS +
Sbjct: 256 E----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLTVS--S 306
Query: 245 TDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGF 301
+ GP+ + + R+ GLTG F DG + +II++ G +G
Sbjct: 307 LQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGI 366
Query: 302 WTPEKG 307
W G
Sbjct: 367 WNSNSG 372
Score = 40 (19.1 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 48 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 81
Score = 38 (18.4 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLT 272
G+T F+KT+ R DL+ + + G + + +S +T
Sbjct: 332 GLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMT 376
>UNIPROTKB|F1P0S5 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 OMA:MVQQFLQ EMBL:AADN02013607
EMBL:AADN02013608 IPI:IPI00883216 Ensembl:ENSGALT00000013865
ArrayExpress:F1P0S5 Uniprot:F1P0S5
Length = 804
Score = 131 (51.2 bits), Expect = 9.8e-16, Sum P(3) = 9.8e-16
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 363 GYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 421
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 422 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 467
Score = 118 (46.6 bits), Expect = 9.8e-16, Sum P(3) = 9.8e-16
Identities = 54/259 (20%), Positives = 115/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV S + + +
Sbjct: 57 GAILSLLTYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGS-IKDVQEFRR 114
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T+++ LE V+
Sbjct: 115 IIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIV--LE-RVM 171
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
V G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 172 HGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAF 231
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 232 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 290
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 291 YTIDVYEMKASGSRKAGYW 309
Score = 84 (34.6 bits), Expect = 9.8e-16, Sum P(3) = 9.8e-16
Identities = 52/222 (23%), Positives = 90/222 (40%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 518 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 575
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 576 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 631
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L V+ A
Sbjct: 632 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLA 691
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
+L ++E + ++++ W+ C D+ + + +L L++
Sbjct: 692 VLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 733
>RGD|70958 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA 3"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0010226 "response to
lithium ion" evidence=IEP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043083 "synaptic
cleft" evidence=IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043198 "dendritic
shaft" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060992 "response to
fungicide" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069
GO:GO:0060992 GO:GO:0010226 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
GO:GO:0032281 GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW
PDB:3LSX PDBsum:3LSW PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062
EMBL:M85036 IPI:IPI00195443 IPI:IPI00231095 PIR:C40170
RefSeq:NP_001106213.1 RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN
PDB:3DP4 PDB:3M3F PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8
PDB:4F1Y PDB:4F22 PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39
PDB:4F3B PDB:4F3G PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K
PDBsum:3O21 PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y
PDBsum:4F22 PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31
PDBsum:4F39 PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492
SMR:P19492 IntAct:P19492 MINT:MINT-86220 STRING:P19492
PhosphoSite:P19492 PRIDE:P19492 GeneID:29628 KEGG:rno:29628
UCSC:RGD:70958 BindingDB:P19492 ChEMBL:CHEMBL3504
EvolutionaryTrace:P19492 NextBio:609848 ArrayExpress:P19492
Genevestigator:P19492 GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 129 (50.5 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 551
Score = 119 (46.9 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 375 YTIDVYEMKVSGSRKAGYW 393
Score = 84 (34.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 602 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 659
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 660 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 715
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 716 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAVNLA 775
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 776 VLKLNEQGLLDKLKNKWWYDKGEC 799
>UNIPROTKB|P19492 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0043195 GO:GO:0032281
GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW PDB:3LSX PDBsum:3LSW
PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062 EMBL:M85036
IPI:IPI00195443 IPI:IPI00231095 PIR:C40170 RefSeq:NP_001106213.1
RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN PDB:3DP4 PDB:3M3F
PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8 PDB:4F1Y PDB:4F22
PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39 PDB:4F3B PDB:4F3G
PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K PDBsum:3O21
PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y PDBsum:4F22
PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31 PDBsum:4F39
PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492 SMR:P19492
IntAct:P19492 MINT:MINT-86220 STRING:P19492 PhosphoSite:P19492
PRIDE:P19492 GeneID:29628 KEGG:rno:29628 UCSC:RGD:70958
BindingDB:P19492 ChEMBL:CHEMBL3504 EvolutionaryTrace:P19492
NextBio:609848 ArrayExpress:P19492 Genevestigator:P19492
GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 129 (50.5 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 551
Score = 119 (46.9 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 375 YTIDVYEMKVSGSRKAGYW 393
Score = 84 (34.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 602 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 659
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 660 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 715
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 716 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAVNLA 775
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 776 VLKLNEQGLLDKLKNKWWYDKGEC 799
>UNIPROTKB|E1BGZ0 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:MVQQFLQ EMBL:DAAA02067291 EMBL:DAAA02067292
EMBL:DAAA02067293 EMBL:DAAA02067294 IPI:IPI00692662
Ensembl:ENSBTAT00000015717 BindingDB:E1BGZ0 Uniprot:E1BGZ0
Length = 754
Score = 129 (50.5 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 313 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 371
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 372 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 417
Score = 116 (45.9 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 53/259 (20%), Positives = 113/259 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 7 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 64
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 65 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 121
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 122 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 181
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 182 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 240
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + G+R G+W
Sbjct: 241 YTIDVYEMKVTGSRKAGYW 259
Score = 84 (34.6 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 468 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 525
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 526 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 581
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 582 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLA 641
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 642 VLKLNEQGLLDKLKNKWWYDKGEC 665
>UNIPROTKB|F5H470 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899 HGNC:HGNC:4573
ChiTaRS:GRIA3 IPI:IPI01012695 ProteinModelPortal:F5H470 SMR:F5H470
Ensembl:ENST00000542149 ArrayExpress:F5H470 Bgee:F5H470
Uniprot:F5H470
Length = 824
Score = 129 (50.5 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 557
Score = 117 (46.2 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 381 YTIDVYEMKVSGSRKAGYW 399
Score = 84 (34.6 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 608 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 665
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 666 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 721
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 722 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLA 781
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 782 VLKLNEQGLLDKLKNKWWYDKGEC 805
>UNIPROTKB|G3V6Z5 [details] [associations]
symbol:Gria3 "Glutamate receptor, ionotropic, AMPA3 (Alpha
3), isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:MVQQFLQ UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V6Z5 Ensembl:ENSRNOT00000010367 Uniprot:G3V6Z5
Length = 888
Score = 129 (50.5 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 551
Score = 117 (46.2 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 375 YTIDVYEMKVSGSRKAGYW 393
Score = 84 (34.6 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 52/222 (23%), Positives = 90/222 (40%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 602 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 659
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 660 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 715
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L V+ A
Sbjct: 716 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLA 775
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
+L ++E + ++++ W+ C D+ + + +L L++
Sbjct: 776 VLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 817
>UNIPROTKB|G3V8Y9 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V8Y9 Ensembl:ENSRNOT00000029031 Uniprot:G3V8Y9
Length = 888
Score = 129 (50.5 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 551
Score = 117 (46.2 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 375 YTIDVYEMKVSGSRKAGYW 393
Score = 84 (34.6 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 602 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 659
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 660 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 715
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 716 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLA 775
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 776 VLKLNEQGLLDKLKNKWWYDKGEC 799
>UNIPROTKB|P42263 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
DrugBank:DB00142 GO:GO:0032281 GO:GO:0043083 GO:GO:0001919
Orphanet:777 EMBL:CH471107 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839
EMBL:U10302 EMBL:U10301 EMBL:X82068 EMBL:AF166365 EMBL:AF166362
EMBL:AF166363 EMBL:AF166364 EMBL:AF167332 EMBL:AF166366
EMBL:AF166367 EMBL:AF166368 EMBL:AF166369 EMBL:AF166370
EMBL:AF166371 EMBL:AF166372 EMBL:AF166373 EMBL:AF166375
EMBL:AF166374 EMBL:AL356213 EMBL:AL035426 EMBL:AL590139 EMBL:Z83848
EMBL:Z82899 IPI:IPI00219315 IPI:IPI00298700 PIR:S49460 PIR:S50128
PIR:S53696 RefSeq:NP_000819.3 RefSeq:NP_015564.4 UniGene:Hs.377070
ProteinModelPortal:P42263 SMR:P42263 DIP:DIP-46195N STRING:P42263
TCDB:1.A.10.1.4 PhosphoSite:P42263 DMDM:77416864 PaxDb:P42263
PRIDE:P42263 DNASU:2892 Ensembl:ENST00000264357
Ensembl:ENST00000371251 Ensembl:ENST00000371256 GeneID:2892
KEGG:hsa:2892 UCSC:uc004etq.4 UCSC:uc004etr.4 CTD:2892
GeneCards:GC0XP122318 HGNC:HGNC:4573 HPA:CAB007799 MIM:300699
MIM:305915 neXtProt:NX_P42263 PharmGKB:PA28968 InParanoid:P42263
KO:K05199 OMA:MVQQFLQ OrthoDB:EOG4XKV68 BindingDB:P42263
ChEMBL:CHEMBL3595 ChiTaRS:GRIA3 GenomeRNAi:2892 NextBio:11437
ArrayExpress:P42263 Bgee:P42263 CleanEx:HS_GRIA3
Genevestigator:P42263 GermOnline:ENSG00000125675 Uniprot:P42263
Length = 894
Score = 129 (50.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 557
Score = 117 (46.2 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 381 YTIDVYEMKVSGSRKAGYW 399
Score = 84 (34.6 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 608 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 665
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 666 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 721
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 722 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLA 781
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 782 VLKLNEQGLLDKLKNKWWYDKGEC 805
>UNIPROTKB|Q38PU6 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839 HSSP:P19491
EMBL:DQ159931 ProteinModelPortal:Q38PU6 SMR:Q38PU6 PRIDE:Q38PU6
Uniprot:Q38PU6
Length = 894
Score = 129 (50.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 557
Score = 117 (46.2 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 381 YTIDVYEMKVSGSRKAGYW 399
Score = 84 (34.6 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 608 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 665
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 666 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 721
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L + V+ A
Sbjct: 722 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAVNLA 781
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 782 VLKLNEQGLLDKLKNKWWYDKGEC 805
>UNIPROTKB|F1RU73 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
OMA:MVQQFLQ EMBL:CU210872 EMBL:CU469331 EMBL:CU856192
Ensembl:ENSSSCT00000013819 Uniprot:F1RU73
Length = 854
Score = 129 (50.5 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 413 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 471
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 472 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 517
Score = 116 (45.9 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 53/259 (20%), Positives = 113/259 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 107 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 164
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 165 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 221
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 222 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 281
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 282 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 340
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + G+R G+W
Sbjct: 341 YTIDVYEMKVTGSRKAGYW 359
Score = 84 (34.6 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 52/222 (23%), Positives = 90/222 (40%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 568 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 625
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 626 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 681
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L V+ A
Sbjct: 682 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLA 741
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
+L ++E + ++++ W+ C D+ + + +L L++
Sbjct: 742 VLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 783
>UNIPROTKB|E2RHU1 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2892
KO:K05199 OMA:MVQQFLQ EMBL:AAEX03026851 EMBL:AAEX03026852
RefSeq:XP_852016.1 ProteinModelPortal:E2RHU1
Ensembl:ENSCAFT00000029477 GeneID:492110 KEGG:cfa:492110
NextBio:20864762 Uniprot:E2RHU1
Length = 894
Score = 129 (50.5 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 557
Score = 116 (45.9 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 53/259 (20%), Positives = 113/259 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + G+R G+W
Sbjct: 381 YTIDVYEMKVTGSRKAGYW 399
Score = 84 (34.6 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 52/222 (23%), Positives = 90/222 (40%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 608 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 665
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 666 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 721
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L V+ A
Sbjct: 722 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLA 781
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
+L ++E + ++++ W+ C D+ + + +L L++
Sbjct: 782 VLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 823
>ZFIN|ZDB-GENE-030131-8013 [details] [associations]
symbol:gria4b "glutamate receptor, ionotropic,
AMPA 4b" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-8013 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
KO:K05200 EMBL:AF525748 IPI:IPI00509003 RefSeq:NP_997917.1
UniGene:Dr.81140 ProteinModelPortal:Q71E58 SMR:Q71E58 GeneID:336069
KEGG:dre:336069 CTD:336069 InParanoid:Q71E58 NextBio:20811163
Uniprot:Q71E58
Length = 904
Score = 176 (67.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 65/253 (25%), Positives = 105/253 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + + VP YG D + +N +V ++ G+ + V +TI
Sbjct: 445 GYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VL------EHRVNEDFRG----PAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA- 535
++ E E G P+ Q + G S WFS F Q+ IS +L+
Sbjct: 564 LVSRFSPYEWHTEEPEEGTDGLPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSG 621
Query: 536 RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGIL 595
RIV VW F LI+ SY I + L K+ D + Y G+ G
Sbjct: 622 RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTD-IAY--GTLDSGST 678
Query: 596 KQLGFDERKLVVY 608
K+ F K+ VY
Sbjct: 679 KEF-FRRSKIAVY 690
Score = 105 (42.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 64/292 (21%), Positives = 117/292 (40%)
Query: 18 LSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPS 77
L S +PS + F L S + GA+ +++ + W V +Y D G ++ +
Sbjct: 113 LHISLITPSFPTEGESQFVL-QLRPSIR-GALLSLLDHYDWNRFVFLY-DTDRGYSILQA 169
Query: 78 LTDALQAIDTRVPYRSVISPLATDDQIEKELYK-LFTMQTRVFILHMLPSLGSRIFEKAN 136
+ + +V S I +D ++L + L Q + F++ + + + E+
Sbjct: 170 IMEKAGQNGWQV---SAICVENFNDASYRQLLEDLDRRQEKTFVIDLEAERLNNMLEQIV 226
Query: 137 EIGLMNKGCVWIMTD-GMT--NLLRTLEPSV-IDSMQGVIGVGPHVPKTKALENFRVRWK 192
+G KG +IM + G NL R + + Q V P V K ++ RW
Sbjct: 227 SVGKHVKGYHYIMANLGFKDINLERFMHGGANVTGFQLVDFSNPMV--IKLMQ----RWN 280
Query: 193 RNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGI 252
+ +E P D L YD +AEA + ++ + A
Sbjct: 281 KLDQREYPGS-DAPPKYTSALTYDGVMVMAEAFRNLRRQKVDISRRGIAGDCLANPAAPW 339
Query: 253 SQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVGFW 302
+Q G + + L R +GLTG+ F G+ + ++ + +NG R +G+W
Sbjct: 340 NQ-GIDMERTLKQVRLQGLTGNVQFDHYGRRVNYTMDVFELKSNGPRRIGYW 390
Score = 90 (36.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 65/303 (21%), Positives = 111/303 (36%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 599 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 656
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ D + Y G+ G K+ F K+ VY S E +F K + G
Sbjct: 657 ESAEDLAKQTD-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPTVFTKTTAEG 712
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ Y LL + +Y + + + G+G P S L V+ A
Sbjct: 713 VARVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSQLGSAVNLA 772
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSCPDAS---TVVSSRSLGLNSFWXXXXXXXXXXXXXXX 734
+L + E + ++++ W+ C SS++L L++
Sbjct: 773 VLKLNEQGLLDKLKNKWWYDKGECGSGGGGEKDKSSQALSLSNVAGVFYILVGGLGLAML 832
Query: 735 XXMAVFIHQHWNVLKNSESSFLSRIRFFLKIFVSRDL--SAHIFKDKGGMQVHSMDATEA 792
+ F ++ N K + +F +R ++ ++ + + + VHS +
Sbjct: 833 VALIEFCYKSRNEAKRMKLTFTEAMRNKARLSITGSVGENGRVLTPDCPKAVHSGPSLRQ 892
Query: 793 SPG 795
S G
Sbjct: 893 SSG 895
>MGI|MGI:95810 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA3 (alpha 3)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043083
"synaptic cleft" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95810 GO:GO:0014069 GO:GO:0060992 GO:GO:0010226
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0043195 GO:GO:0032281 GO:GO:0043083
GO:GO:0001919 InterPro:IPR001828 EMBL:CH466570 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 CTD:2892 KO:K05199
OrthoDB:EOG4XKV68 EMBL:AB022342 EMBL:AB079072 EMBL:AF483494
EMBL:AF483495 EMBL:AK220530 EMBL:AL672290 EMBL:AL672232
EMBL:BC129855 IPI:IPI00131472 RefSeq:NP_058582.3 UniGene:Mm.327681
PDB:3LSW PDB:3LSX PDBsum:3LSW PDBsum:3LSX ProteinModelPortal:Q9Z2W9
SMR:Q9Z2W9 IntAct:Q9Z2W9 STRING:Q9Z2W9 PhosphoSite:Q9Z2W9
PaxDb:Q9Z2W9 PRIDE:Q9Z2W9 Ensembl:ENSMUST00000076349 GeneID:53623
KEGG:mmu:53623 UCSC:uc009tam.2 BindingDB:Q9Z2W9 ChEMBL:CHEMBL3624
EvolutionaryTrace:Q9Z2W9 NextBio:310361 Bgee:Q9Z2W9
CleanEx:MM_GRIA3 Genevestigator:Q9Z2W9
GermOnline:ENSMUSG00000001986 Uniprot:Q9Z2W9
Length = 888
Score = 129 (50.5 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 551
Score = 114 (45.2 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 52/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLGYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDIQEFRR 198
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T+++ LE V+
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIV--LE-RVM 255
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 375 YTIDVYEMKVSGSRKAGYW 393
Score = 84 (34.6 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 52/222 (23%), Positives = 90/222 (40%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 602 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 659
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 660 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFTKTTADG 715
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L V+ A
Sbjct: 716 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLA 775
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
+L ++E + ++++ W+ C D+ + + +L L++
Sbjct: 776 VLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 817
>UNIPROTKB|E7EMV5 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 HGNC:HGNC:4571 IPI:IPI00977433
ProteinModelPortal:E7EMV5 SMR:E7EMV5 Ensembl:ENST00000521843
ArrayExpress:E7EMV5 Bgee:E7EMV5 Uniprot:E7EMV5
Length = 839
Score = 142 (55.0 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 368 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 426
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 427 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 472
Score = 93 (37.8 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 118
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 119 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 178
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 179 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 232
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 233 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 287
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 288 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 316
Score = 90 (36.7 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 46/206 (22%), Positives = 78/206 (37%)
Query: 514 SFWFSFSTMV-----FSQRERVISNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXX 568
S WFS + S R R +S RIV VW F LI+ SY
Sbjct: 521 SLWFSLGAFMQQGCDISPRSRSLSG--RIVGGVWWFFTLIIISSYTANLAAFLTVERMVS 578
Query: 569 XITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSV 623
I + L K+ + + Y G+ G K+ F K+ V+ + +F + +
Sbjct: 579 PIESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTE 634
Query: 624 NGGIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVS 675
G I + Y LL + +Y + + + G+G P S L + V+
Sbjct: 635 EGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVN 694
Query: 676 KAILNVTEGDKMKEIEDAWFKKHSSC 701
A+L + E + ++++ W+ C
Sbjct: 695 LAVLKLNEQGLLDKLKNKWWYDKGEC 720
Score = 42 (19.8 bits), Expect = 9.7e-10, Sum P(3) = 9.7e-10
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 45 PVDTSNQFVLQLRPELQDALISI 67
>UNIPROTKB|E7EPY9 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790891
ProteinModelPortal:E7EPY9 SMR:E7EPY9 Ensembl:ENST00000399914
ArrayExpress:E7EPY9 Bgee:E7EPY9 Uniprot:E7EPY9
Length = 934
Score = 152 (58.6 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 521
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 581
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 582 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 641
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 642 FFTLIIISSY 651
Score = 97 (39.2 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 52/259 (20%), Positives = 93/259 (35%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 671 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVL 729
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 730 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 789
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ +S +LG+ + + FI++
Sbjct: 790 KLHMMKEKWWRGNG-CPEEDNKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSR 847
Query: 746 NVLKNSESSFLSRIRFFLK 764
+ SRIRF+ +
Sbjct: 848 KNNDIEQKGKSSRIRFYFR 866
Score = 77 (32.2 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 63/311 (20%), Positives = 123/311 (39%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + AI ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 233
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 234 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 290
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 291 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 342
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINVNN-GA 296
VS + + GP+ + + R+ GLTG F +G + +II++ G
Sbjct: 343 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGT 400
Query: 297 RGVGFWTPEKG 307
+G W G
Sbjct: 401 EKIGIWNSNSG 411
Score = 43 (20.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLT 272
G+T F+KTN R DL+ + + G + + +S +T
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMT 415
Score = 40 (19.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
>UNIPROTKB|F1P2K1 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00819235
Ensembl:ENSGALT00000040367 Uniprot:F1P2K1
Length = 797
Score = 188 (71.2 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 86/378 (22%), Positives = 151/378 (39%)
Query: 350 GVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF--KAVIQELPYAV--AYD--FVPYGQ 403
G PVKK F N TI + G+C+D+ A + Y V D F +
Sbjct: 364 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 404 PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 463
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 482
Query: 464 RNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTSFW 516
F+QP LW+ ++L+ +VN + + ++ W
Sbjct: 483 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 542
Query: 517 FSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK 574
FS+ ++ S E + ARI+ +VW +I+ SY IT +
Sbjct: 543 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 602
Query: 575 --MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGI 627
L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 603 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLH 661
Query: 628 AAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKM 687
A +D ++ Q C E F++ GFG SP +VS AIL E M
Sbjct: 662 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 719
Query: 688 KEIEDAWFKKHSSCPDAS 705
++++ W + + C S
Sbjct: 720 EDLDKTWVR-YQECDSRS 736
Score = 80 (33.2 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 45/172 (26%), Positives = 72/172 (41%)
Query: 216 DATRALAEAVEKAGITSFGFDKTNVSRNATDLEA-FGISQNGPKLLQALSSTRF-KGLTG 273
DA +A+AV F+K N++ I + GP + L S+++ +G+TG
Sbjct: 219 DAVAVVAQAVHDL------FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTG 272
Query: 274 DYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDS 331
F DG + + + I+N+ N VG + IIWPG
Sbjct: 273 RVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGE 321
Query: 332 TSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF 383
T P+G+++ T KL+I V + + FV V +PT G C + F
Sbjct: 322 TEKPQGYQMST---KLKI-VTIHQ--EPFVYV-------KPTQADGTCREEF 360
Score = 50 (22.7 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 18/82 (21%), Positives = 36/82 (43%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P++ + T S+ S +S + F R S QA +++ F W + I D+ G
Sbjct: 30 RIPVIGLT-TRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEG 88
Query: 72 EEMIPSLTDALQAIDTRVPYRS 93
L L+ +++ R+
Sbjct: 89 RAAQKKLETLLEERESKSKKRN 110
Score = 44 (20.5 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVI 165
++ RV IL + ++ A + + G VW++ + N LR VI
Sbjct: 150 LEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVI 203
>UNIPROTKB|F1NW92 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02028659 EMBL:AADN02028660 IPI:IPI00585053
Ensembl:ENSGALT00000006493 Uniprot:F1NW92
Length = 902
Score = 172 (65.6 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 63/252 (25%), Positives = 103/252 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTK-TWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VL------EHRVNEDFRG---PAGQQVG-----TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ E E G PA Q S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 106 (42.4 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 54/264 (20%), Positives = 113/264 (42%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ ++I+ + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRV 187
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
L++ L + R+ ++ + I K ++ G +I+ + G ++ T
Sbjct: 188 LFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDIDLT---KFR 244
Query: 166 DSMQGVIGVGPHVPKTKALE-NFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEA 224
+S V G V T + +W+ N +E P + L YD R +AEA
Sbjct: 245 ESGANVTGF-QLVNYTDTVPARIMQQWRNNDARELPRVDWKRPKYTSALTYDGVRVMAEA 303
Query: 225 VEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQ 283
+ + + + A Q G + +AL RF+GL+G+ F + G+
Sbjct: 304 FQNLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLSGNVQFNEKGRRT 362
Query: 284 SSAFEIINV-NNGARGVGFWTPEK 306
+ +I + ++G R +G+W ++
Sbjct: 363 NYTLHVIEMKHDGIRKIGYWNEDE 386
Score = 86 (35.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 47/204 (23%), Positives = 80/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGEC 787
Score = 42 (19.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL ++
Sbjct: 114 PVETSNQFVLQLRPELQDALISV 136
Score = 40 (19.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 53 IKAFG-WRE---AVPIYVDNQYGEEMIPSLTDALQAIDTRV--PY 91
I+ G W E VP+ +D Q G E SL + + T + PY
Sbjct: 376 IRKIGYWNEDEKLVPVAIDTQTGNEST-SLQNRTYIVTTILEDPY 419
>UNIPROTKB|F1NKY9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00821429
Ensembl:ENSGALT00000014471 Uniprot:F1NKY9
Length = 856
Score = 188 (71.2 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 86/378 (22%), Positives = 151/378 (39%)
Query: 350 GVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF--KAVIQELPYAV--AYD--FVPYGQ 403
G PVKK F N TI + G+C+D+ A + Y V D F +
Sbjct: 364 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 404 PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 463
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 482
Query: 464 RNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTSFW 516
F+QP LW+ ++L+ +VN + + ++ W
Sbjct: 483 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 542
Query: 517 FSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK 574
FS+ ++ S E + ARI+ +VW +I+ SY IT +
Sbjct: 543 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 602
Query: 575 --MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGI 627
L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 603 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLH 661
Query: 628 AAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKM 687
A +D ++ Q C E F++ GFG SP +VS AIL E M
Sbjct: 662 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 719
Query: 688 KEIEDAWFKKHSSCPDAS 705
++++ W + + C S
Sbjct: 720 EDLDKTWVR-YQECDSRS 736
Score = 80 (33.2 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 45/172 (26%), Positives = 72/172 (41%)
Query: 216 DATRALAEAVEKAGITSFGFDKTNVSRNATDLEA-FGISQNGPKLLQALSSTRF-KGLTG 273
DA +A+AV F+K N++ I + GP + L S+++ +G+TG
Sbjct: 219 DAVAVVAQAVHDL------FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTG 272
Query: 274 DYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDS 331
F DG + + + I+N+ N VG + IIWPG
Sbjct: 273 RVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGE 321
Query: 332 TSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF 383
T P+G+++ T KL+I V + + FV V +PT G C + F
Sbjct: 322 TEKPQGYQMST---KLKI-VTIHQ--EPFVYV-------KPTQADGTCREEF 360
Score = 50 (22.7 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 18/82 (21%), Positives = 36/82 (43%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P++ + T S+ S +S + F R S QA +++ F W + I D+ G
Sbjct: 30 RIPVIGLT-TRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEG 88
Query: 72 EEMIPSLTDALQAIDTRVPYRS 93
L L+ +++ R+
Sbjct: 89 RAAQKKLETLLEERESKSKKRN 110
Score = 44 (20.5 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVI 165
++ RV IL + ++ A + + G VW++ + N LR VI
Sbjct: 150 LEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVI 203
>ZFIN|ZDB-GENE-051202-2 [details] [associations]
symbol:grin1b "glutamate receptor, ionotropic,
N-methyl D-aspartate 1b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-2
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 KO:K05208
InterPro:IPR018882 Pfam:PF10562 HOGENOM:HOG000231491
HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:BX276128 EMBL:AL831768
IPI:IPI00616850 RefSeq:NP_001137603.1 UniGene:Dr.83363 SMR:Q6ZM67
Ensembl:ENSDART00000034849 GeneID:100005675 KEGG:dre:100005675
CTD:100005675 InParanoid:Q6ZM67 NextBio:20786787 Uniprot:Q6ZM67
Length = 937
Score = 180 (68.4 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 85/378 (22%), Positives = 150/378 (39%)
Query: 350 GVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF--KAVIQELPYAV--AYD--FVPYGQ 403
GV +KK N TI + P G+C+D+ A Y V D F +
Sbjct: 446 GVKIKKVICTGPNETIPGRPIVPQCCYGFCIDLLIKLAFTMNFTYEVHLVADGKFGTQER 505
Query: 404 PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 463
+ S+ +N ++ ++ G D +V +TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 506 VNNSNKKEWNGMMGELLSGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 564
Query: 464 RNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTSFW 516
F+QP LW+ ++L+ +VN + + ++ W
Sbjct: 565 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 624
Query: 517 FSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK 574
FS+ ++ S E + ARI+ +VW +I+ SY IT +
Sbjct: 625 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 684
Query: 575 --MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGI 627
L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 685 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLH 743
Query: 628 AAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKM 687
A +D ++ Q C E F++ GFG SP +VS AIL+ E M
Sbjct: 744 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILSSHENGFM 801
Query: 688 KEIEDAWFKKHSSCPDAS 705
++++ W + + C S
Sbjct: 802 EDLDKTWVR-YQECDSRS 818
Score = 85 (35.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 42/168 (25%), Positives = 73/168 (43%)
Query: 215 YDATRALAEAVEKAGITSFGFDKTNVSRNATDLEA-FGISQNGPKLLQALSSTRFK-GLT 272
YDA +A+++++ F+K N++ I + GP + L S+++ GLT
Sbjct: 299 YDAVAVVAQSIQEL------FEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLT 352
Query: 273 GDYIFVD-GQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGD 330
G F D G + + + I+N VG + + IIWPG
Sbjct: 353 GRVEFNDDGDRRFAHYSILNYQKTRLVQVGVYNGSQ----------VVMNAQRKIIWPGG 402
Query: 331 STSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTI-DPKTQEPTSVTG 377
T PKG+++ T +L+I ++ F +V T+ D +E +V G
Sbjct: 403 ETEKPKGYQMST---RLKIVTIHQEPFV-YVKPTLRDGTCKEEHTVNG 446
Score = 57 (25.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 80 DALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIG 139
D L + R P + + D + L + ++ RV IL + I++ A ++
Sbjct: 197 DQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSASEDEAAAIYKVARQLN 256
Query: 140 LMNKGCVWIM 149
+ G VW++
Sbjct: 257 MTGSGYVWLV 266
Score = 50 (22.7 bits), Expect = 6.4e-14, Sum P(3) = 6.4e-14
Identities = 28/125 (22%), Positives = 55/125 (44%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P++ + T S+ S +S + F R S QA +++ F W + I D+ G
Sbjct: 112 RIPVVGLT-TRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEG 170
Query: 72 EEMIPSLTDALQAIDTRVPYRSV--ISPLATDDQIEKELYK--LFTMQTRVF-ILHMLPS 126
L L+ +T+ R+ + L+ D++ + K LF+ T + +L
Sbjct: 171 RAAQKRLETLLEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKE 230
Query: 127 LGSRI 131
L +R+
Sbjct: 231 LEARV 235
>UNIPROTKB|F1P2J8 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 OMA:VYRSAAM EMBL:AADN02026958 IPI:IPI00639787
ProteinModelPortal:F1P2J8 Ensembl:ENSGALT00000040370 Uniprot:F1P2J8
Length = 901
Score = 188 (71.2 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 86/378 (22%), Positives = 151/378 (39%)
Query: 350 GVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF--KAVIQELPYAV--AYD--FVPYGQ 403
G PVKK F N TI + G+C+D+ A + Y V D F +
Sbjct: 364 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 404 PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 463
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 482
Query: 464 RNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTSFW 516
F+QP LW+ ++L+ +VN + + ++ W
Sbjct: 483 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 542
Query: 517 FSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK 574
FS+ ++ S E + ARI+ +VW +I+ SY IT +
Sbjct: 543 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 602
Query: 575 --MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGI 627
L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 603 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLH 661
Query: 628 AAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKM 687
A +D ++ Q C E F++ GFG SP +VS AIL E M
Sbjct: 662 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 719
Query: 688 KEIEDAWFKKHSSCPDAS 705
++++ W + + C S
Sbjct: 720 EDLDKTWVR-YQECDSRS 736
Score = 80 (33.2 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 45/172 (26%), Positives = 72/172 (41%)
Query: 216 DATRALAEAVEKAGITSFGFDKTNVSRNATDLEA-FGISQNGPKLLQALSSTRF-KGLTG 273
DA +A+AV F+K N++ I + GP + L S+++ +G+TG
Sbjct: 219 DAVAVVAQAVHDL------FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTG 272
Query: 274 DYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDS 331
F DG + + + I+N+ N VG + IIWPG
Sbjct: 273 RVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGE 321
Query: 332 TSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF 383
T P+G+++ T KL+I V + + FV V +PT G C + F
Sbjct: 322 TEKPQGYQMST---KLKI-VTIHQ--EPFVYV-------KPTQADGTCREEF 360
Score = 50 (22.7 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 18/82 (21%), Positives = 36/82 (43%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P++ + T S+ S +S + F R S QA +++ F W + I D+ G
Sbjct: 30 RIPVIGLT-TRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEG 88
Query: 72 EEMIPSLTDALQAIDTRVPYRS 93
L L+ +++ R+
Sbjct: 89 RAAQKKLETLLEERESKSKKRN 110
Score = 44 (20.5 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVI 165
++ RV IL + ++ A + + G VW++ + N LR VI
Sbjct: 150 LEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVI 203
>UNIPROTKB|I3LT35 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:CU861922
EMBL:FP325290 Ensembl:ENSSSCT00000028121 Uniprot:I3LT35
Length = 896
Score = 153 (58.9 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 47/190 (24%), Positives = 78/190 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ + D V +TI +
Sbjct: 423 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 482
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 483 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 542
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 543 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 602
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 603 FFTLIIISSY 612
Score = 95 (38.5 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 53/261 (20%), Positives = 96/261 (36%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 572 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 631
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 632 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVL 690
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 691 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 750
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ +S +LG+ + + FI++
Sbjct: 751 KLHMMKEKWWRGNG-CPEEDNKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSR 808
Query: 746 --NVLKNSESSFLSRIRFFLK 764
N ++ + SRIRF+ +
Sbjct: 809 KNNDIEQQKGKS-SRIRFYFR 828
Score = 73 (30.8 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 61/311 (19%), Positives = 123/311 (39%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 85 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDST- 142
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 143 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 194
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 195 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 251
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ ++ +W LQ P + L + G++ +A + +AV I S +
Sbjct: 252 -SSIID----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 303
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINVNN-GA 296
VS + + GP+ + + ++ GLTG F DG + +II++ G
Sbjct: 304 VS--SLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDIISLKEEGT 361
Query: 297 RGVGFWTPEKG 307
+G W G
Sbjct: 362 EKIGIWNSNSG 372
Score = 40 (19.1 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 48 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 81
Score = 38 (18.4 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLT 272
G+T F+KT+ R DL+ + + G + + +S +T
Sbjct: 332 GLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMT 376
>MGI|MGI:95819 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, NMDA1 (zeta 1)"
species:10090 "Mus musculus" [GO:0001661 "conditioned taste
aversion" evidence=IMP] [GO:0001964 "startle response"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IGI;IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005102 "receptor binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=IGI] [GO:0005262 "calcium channel activity"
evidence=IGI;IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=ISO;IGI] [GO:0006816 "calcium ion
transport" evidence=IMP;IDA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0007612 "learning" evidence=IMP] [GO:0007613 "memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008306
"associative learning" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0008542 "visual learning" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010646 "regulation of
cell communication" evidence=IMP] [GO:0010942 "positive regulation
of cell death" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IC;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO;IMP] [GO:0016595 "glutamate binding"
evidence=ISO] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISO;IPI] [GO:0018964 "propylene
metabolic process" evidence=IDA] [GO:0019233 "sensory perception of
pain" evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021586 "pons maturation" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0030426 "growth cone" evidence=NAS] [GO:0032590 "dendrite
membrane" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IDA] [GO:0035176 "social behavior" evidence=IMP]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IMP;IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043083 "synaptic cleft" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IMP] [GO:0043523 "regulation of neuron apoptotic process"
evidence=IGI;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IGI;IMP] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=IMP] [GO:0048168 "regulation of neuronal synaptic
plasticity" evidence=IMP] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048511 "rhythmic
process" evidence=ISO] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050770 "regulation of
axonogenesis" evidence=IMP] [GO:0050905 "neuromuscular process"
evidence=IMP] [GO:0051262 "protein tetramerization" evidence=ISO]
[GO:0051963 "regulation of synapse assembly" evidence=IMP]
[GO:0055074 "calcium ion homeostasis" evidence=IDA] [GO:0060076
"excitatory synapse" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060134 "prepulse inhibition" evidence=IMP] [GO:0060179 "male
mating behavior" evidence=IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO;IGI;IDA] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95819 GO:GO:0021987 GO:GO:0008355 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0019233 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0045944
GO:GO:0008344 GO:GO:0001967 GO:GO:0008542 GO:GO:0007616
GO:GO:0005509 GO:GO:0060079 GO:GO:0001975 GO:GO:0043524
GO:GO:0060134 GO:GO:0035249 GO:GO:0030288 GO:GO:0030426
GO:GO:0043065 GO:GO:0005516 GO:GO:0050770 GO:GO:0048814
GO:GO:0007585 GO:GO:0006874 GO:GO:0001661 GO:GO:0051963
GO:GO:0035176 EMBL:AL732309 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GeneTree:ENSGT00700000104113 GO:GO:0060179
GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562 CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 GO:GO:0018964 EMBL:D10028
EMBL:BC039157 IPI:IPI00118385 IPI:IPI00608056 PIR:S21104
RefSeq:NP_001171127.1 RefSeq:NP_001171128.1 RefSeq:NP_032195.1
UniGene:Mm.278672 ProteinModelPortal:P35438 SMR:P35438
DIP:DIP-31577N IntAct:P35438 MINT:MINT-135802 STRING:P35438
PhosphoSite:P35438 PaxDb:P35438 PRIDE:P35438
Ensembl:ENSMUST00000028335 Ensembl:ENSMUST00000114312 GeneID:14810
KEGG:mmu:14810 UCSC:uc008iri.2 UCSC:uc008irk.2 BindingDB:P35438
ChEMBL:CHEMBL2895 NextBio:286995 Bgee:P35438 CleanEx:MM_GRIN1
Genevestigator:P35438 GermOnline:ENSMUSG00000026959 GO:GO:0021586
Uniprot:P35438
Length = 938
Score = 180 (68.4 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 83/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+CVD+ + + + + V G+
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 488 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 546
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 547 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 606
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 607 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 666
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 667 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 725
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 726 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 783
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 784 FMEDLDKTWVR-YQECDSRS 802
Score = 75 (31.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 266 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 325
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 326 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 374
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 375 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTMSDGTCKEEFTVNG-- 428
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 429 -DPVKKVI 435
Score = 65 (27.9 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 33/164 (20%), Positives = 67/164 (40%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P+L + T S+ S +S + F R S Q+ +++ + W + + D+ G
Sbjct: 115 RIPVLGLT-TRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEG 173
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
L L+ +++ P T + + L + ++ RV IL + +
Sbjct: 174 RAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEARDLEARVIILSASEDDAATV 231
Query: 132 FEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGVIG 173
+ A + + G VW++ + N LR P I +Q + G
Sbjct: 232 YRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLING 274
>UNIPROTKB|A2AVK2 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOVERGEN:HBG052638 UniGene:Hs.558334 HGNC:HGNC:4584 ChiTaRS:GRIN1
IPI:IPI00789973 SMR:A2AVK2 Ensembl:ENST00000350902 UCSC:uc004cli.1
Uniprot:A2AVK2
Length = 909
Score = 179 (68.1 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 488 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 546
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 547 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 606
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 607 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 666
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 667 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 725
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 726 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 783
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 784 FMEDLDKTWVR-YQECDSRS 802
Score = 76 (31.8 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 266 ILGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 325
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 326 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 374
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 375 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 428
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 429 -DPVKKVI 435
Score = 64 (27.6 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 26/138 (18%), Positives = 57/138 (41%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P+L + T S+ S +S + F R S Q+ +++ + W + + D+ G
Sbjct: 115 RIPVLGLT-TRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEG 173
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
L L+ +++ P T + + L + ++ RV IL + +
Sbjct: 174 RAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEAKELEARVIILSASEDDAATV 231
Query: 132 FEKANEIGLMNKGCVWIM 149
+ A + + G VW++
Sbjct: 232 YRAAAMLNMTGSGYVWLV 249
>UNIPROTKB|Q05586 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IMP;IDA] [GO:0016595 "glutamate binding" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0045471 "response to ethanol"
evidence=IDA] [GO:0006812 "cation transport" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042391 "regulation
of membrane potential" evidence=IDA] [GO:0005262 "calcium channel
activity" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0008542 "visual
learning" evidence=ISS] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0055074 "calcium ion homeostasis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0018964 "propylene
metabolic process" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0043083 "synaptic cleft" evidence=ISS] [GO:0042165
"neurotransmitter binding" evidence=ISS] [GO:0043195 "terminal
bouton" evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0060076 "excitatory synapse" evidence=ISS] [GO:0070588 "calcium
ion transmembrane transport" evidence=IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0045471 GO:GO:0030054 GO:GO:0045211
GO:GO:0008021 GO:GO:0045944 GO:GO:0035235 GO:GO:0008542
GO:GO:0005509 GO:GO:0043195 DrugBank:DB00142 GO:GO:0030288
GO:GO:0005516 GO:GO:0043083 EMBL:AL929554 InterPro:IPR001828
GO:GO:0070588 GO:GO:0055074 GO:GO:0060076 Orphanet:178469 PDB:3BYA
PDBsum:3BYA DrugBank:DB01173 GO:GO:0016595 GO:GO:2000463
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
eggNOG:NOG282132 GO:GO:0016594 KO:K05208 InterPro:IPR018882
Pfam:PF10562 TCDB:1.A.10.1.6 CTD:2902 HOVERGEN:HBG052638
OrthoDB:EOG4CG07J EMBL:L13266 EMBL:L13267 EMBL:L13268 EMBL:D13515
EMBL:L05666 EMBL:AF015730 EMBL:AF015731 EMBL:Z32772 EMBL:Z32773
EMBL:Z32774 EMBL:U08106 EMBL:U08107 EMBL:S57708 IPI:IPI00011989
IPI:IPI00013915 IPI:IPI00335571 IPI:IPI00465228 IPI:IPI00470730
IPI:IPI00470731 IPI:IPI00646891 PIR:A46612 PIR:A47551
RefSeq:NP_000823.4 RefSeq:NP_001172019.1 RefSeq:NP_001172020.1
RefSeq:NP_015566.1 RefSeq:NP_067544.1 UniGene:Hs.558334 PDB:2NR1
PDBsum:2NR1 ProteinModelPortal:Q05586 SMR:Q05586 IntAct:Q05586
MINT:MINT-1900224 STRING:Q05586 PhosphoSite:Q05586 DMDM:548377
PaxDb:Q05586 PRIDE:Q05586 Ensembl:ENST00000315048
Ensembl:ENST00000371546 Ensembl:ENST00000371550
Ensembl:ENST00000371553 Ensembl:ENST00000371559
Ensembl:ENST00000371560 Ensembl:ENST00000371561 GeneID:2902
KEGG:hsa:2902 UCSC:uc004clk.3 UCSC:uc004cll.3 UCSC:uc004clm.3
GeneCards:GC09P140032 HGNC:HGNC:4584 HPA:CAB006831 MIM:138249
MIM:614254 neXtProt:NX_Q05586 PharmGKB:PA28978 OMA:VYRSAAM
PhylomeDB:Q05586 BindingDB:Q05586 ChEMBL:CHEMBL2015 ChiTaRS:GRIN1
EvolutionaryTrace:Q05586 GenomeRNAi:2902 NextBio:11487
PMAP-CutDB:Q5VSF3 ArrayExpress:Q05586 Bgee:Q05586 CleanEx:HS_GRIN1
Genevestigator:Q05586 GermOnline:ENSG00000176884 GO:GO:0018964
Uniprot:Q05586
Length = 938
Score = 179 (68.1 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 488 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 546
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 547 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 606
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 607 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 666
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 667 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 725
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 726 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 783
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 784 FMEDLDKTWVR-YQECDSRS 802
Score = 76 (31.8 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 266 ILGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 325
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 326 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 374
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 375 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 428
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 429 -DPVKKVI 435
Score = 64 (27.6 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 26/138 (18%), Positives = 57/138 (41%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P+L + T S+ S +S + F R S Q+ +++ + W + + D+ G
Sbjct: 115 RIPVLGLT-TRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEG 173
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
L L+ +++ P T + + L + ++ RV IL + +
Sbjct: 174 RAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEAKELEARVIILSASEDDAATV 231
Query: 132 FEKANEIGLMNKGCVWIM 149
+ A + + G VW++
Sbjct: 232 YRAAAMLNMTGSGYVWLV 249
>RGD|2736 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, N-methyl D-aspartate
1" species:10116 "Rattus norvegicus" [GO:0001661 "conditioned taste
aversion" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IDA;TAS]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP;IDA;TAS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO] [GO:0005262 "calcium channel activity"
evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0006812
"cation transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA;ISO] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA;ISO] [GO:0007611 "learning or memory" evidence=ISO;TAS]
[GO:0007612 "learning" evidence=ISO] [GO:0007613 "memory"
evidence=ISO] [GO:0007616 "long-term memory" evidence=IEA;ISO]
[GO:0008021 "synaptic vesicle" evidence=IEA;ISO] [GO:0008306
"associative learning" evidence=ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0008355 "olfactory learning"
evidence=IEA;ISO] [GO:0008542 "visual learning" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0010646 "regulation
of cell communication" evidence=ISO] [GO:0010942 "positive regulation
of cell death" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0014075 "response to amine stimulus" evidence=IEP]
[GO:0016020 "membrane" evidence=ISO] [GO:0016594 "glycine binding"
evidence=ISO;IDA] [GO:0016595 "glutamate binding" evidence=ISO;IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA;TAS] [GO:0018964 "propylene metabolic
process" evidence=IEA;ISO] [GO:0019233 "sensory perception of pain"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021586 "pons maturation" evidence=IEA;ISO] [GO:0021987 "cerebral
cortex development" evidence=IEA;ISO] [GO:0022843 "voltage-gated
cation channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032590
"dendrite membrane" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0035254 "glutamate
receptor binding" evidence=IPI] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IEA;ISO] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=ISO] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA;ISO]
[GO:0048511 "rhythmic process" evidence=IDA] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=IEA;ISO] [GO:0050770 "regulation
of axonogenesis" evidence=IEA;ISO] [GO:0050905 "neuromuscular
process" evidence=ISO] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051592 "response to calcium ion" evidence=IEP]
[GO:0051963 "regulation of synapse assembly" evidence=IEA;ISO]
[GO:0055074 "calcium ion homeostasis" evidence=ISO] [GO:0060076
"excitatory synapse" evidence=IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060134
"prepulse inhibition" evidence=IEA;ISO] [GO:0060179 "male mating
behavior" evidence=IEA;ISO] [GO:0060992 "response to fungicide"
evidence=IEP] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2736 GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288 GO:GO:0007611
GO:GO:0014070 GO:GO:0043083 GO:GO:0010942 GO:GO:0032590
InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076 GO:GO:0016595
GO:GO:2000463 GO:GO:0071287 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GeneTree:ENSGT00700000104113
GO:GO:0022843 GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562
PDB:2A5T PDBsum:2A5T CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638
OMA:VYRSAAM EMBL:X63255 EMBL:AY157515 EMBL:U08261 EMBL:U08262
EMBL:U08263 EMBL:U08264 EMBL:U08265 EMBL:U08267 EMBL:U08268
EMBL:S39217 EMBL:S39218 EMBL:S39219 EMBL:S39220 EMBL:S39221
EMBL:X65227 IPI:IPI00198625 IPI:IPI00231254 IPI:IPI00231255
IPI:IPI00231256 IPI:IPI00231257 IPI:IPI00231259 IPI:IPI00389747
PIR:JN0336 PIR:JN0337 PIR:JN0338 PIR:JN0339 PIR:JN0340 PIR:JN0341
PIR:JN0342 PIR:S19710 RefSeq:NP_001257531.1 RefSeq:NP_001257532.1
RefSeq:NP_001257534.1 RefSeq:NP_001257537.1 RefSeq:NP_001257539.1
RefSeq:NP_058706.1 UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9
PDB:1PBQ PDB:1Y1M PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8
PDBsum:1PB9 PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20
PDBsum:3Q41 ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N
IntAct:P35439 MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439
PRIDE:P35439 Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408 UCSC:RGD:2736
BindingDB:P35439 ChEMBL:CHEMBL330 EvolutionaryTrace:P35439
NextBio:603223 ArrayExpress:P35439 Genevestigator:P35439
GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 179 (68.1 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 488 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 546
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 547 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 606
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 607 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 666
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 667 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 725
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 726 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 783
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 784 FMEDLDKTWVR-YQECDSRS 802
Score = 75 (31.5 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 266 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 325
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 326 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 374
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 375 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTMSDGTCKEEFTVNG-- 428
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 429 -DPVKKVI 435
Score = 65 (27.9 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 33/164 (20%), Positives = 67/164 (40%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P+L + T S+ S +S + F R S Q+ +++ + W + + D+ G
Sbjct: 115 RIPVLGLT-TRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEG 173
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
L L+ +++ P T + + L + ++ RV IL + +
Sbjct: 174 RAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEARELEARVIILSASEDDAATV 231
Query: 132 FEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGVIG 173
+ A + + G VW++ + N LR P I +Q + G
Sbjct: 232 YRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLING 274
>UNIPROTKB|P35439 [details] [associations]
symbol:Grin1 "Glutamate receptor ionotropic, NMDA 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2736
GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288
GO:GO:0007611 GO:GO:0014070 GO:GO:0043083 GO:GO:0010942
GO:GO:0032590 InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076
GO:GO:0016595 GO:GO:2000463 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0022843 GO:GO:0004972 KO:K05208
InterPro:IPR018882 Pfam:PF10562 PDB:2A5T PDBsum:2A5T CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:X63255
EMBL:AY157515 EMBL:U08261 EMBL:U08262 EMBL:U08263 EMBL:U08264
EMBL:U08265 EMBL:U08267 EMBL:U08268 EMBL:S39217 EMBL:S39218
EMBL:S39219 EMBL:S39220 EMBL:S39221 EMBL:X65227 IPI:IPI00198625
IPI:IPI00231254 IPI:IPI00231255 IPI:IPI00231256 IPI:IPI00231257
IPI:IPI00231259 IPI:IPI00389747 PIR:JN0336 PIR:JN0337 PIR:JN0338
PIR:JN0339 PIR:JN0340 PIR:JN0341 PIR:JN0342 PIR:S19710
RefSeq:NP_001257531.1 RefSeq:NP_001257532.1 RefSeq:NP_001257534.1
RefSeq:NP_001257537.1 RefSeq:NP_001257539.1 RefSeq:NP_058706.1
UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9 PDB:1PBQ PDB:1Y1M
PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8 PDBsum:1PB9
PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20 PDBsum:3Q41
ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N IntAct:P35439
MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439 PRIDE:P35439
Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408
UCSC:RGD:2736 BindingDB:P35439 ChEMBL:CHEMBL330
EvolutionaryTrace:P35439 NextBio:603223 ArrayExpress:P35439
Genevestigator:P35439 GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 179 (68.1 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 488 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 546
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 547 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 606
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 607 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 666
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 667 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 725
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 726 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 783
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 784 FMEDLDKTWVR-YQECDSRS 802
Score = 75 (31.5 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 266 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 325
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 326 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 374
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 375 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTMSDGTCKEEFTVNG-- 428
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 429 -DPVKKVI 435
Score = 65 (27.9 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 33/164 (20%), Positives = 67/164 (40%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P+L + T S+ S +S + F R S Q+ +++ + W + + D+ G
Sbjct: 115 RIPVLGLT-TRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEG 173
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
L L+ +++ P T + + L + ++ RV IL + +
Sbjct: 174 RAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEARELEARVIILSASEDDAATV 231
Query: 132 FEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGVIG 173
+ A + + G VW++ + N LR P I +Q + G
Sbjct: 232 YRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLING 274
>UNIPROTKB|F1P5Y1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0032590 "dendrite
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0032281 GO:GO:0031623 GO:GO:0032590
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:ARIMQQW EMBL:AADN02028659 EMBL:AADN02028660
IPI:IPI00820450 ProteinModelPortal:F1P5Y1
Ensembl:ENSGALT00000040661 Uniprot:F1P5Y1
Length = 904
Score = 172 (65.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 63/252 (25%), Positives = 103/252 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y + V YG D + ++N +V ++ G D V +TI
Sbjct: 439 GYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTK-TWNGMVGELVYGRADVAVAPLTI 497
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 498 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 557
Query: 494 VL------EHRVNEDFRG---PAGQQVG-----TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ E E G PA Q S WFS F Q+ IS +L+ R
Sbjct: 558 LVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 615
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 616 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 672
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 673 EF-FRRSKIAVF 683
Score = 101 (40.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 54/266 (20%), Positives = 114/266 (42%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ ++I+ + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRV 187
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
L++ L + R+ ++ + I K ++ G +I+ + G ++ T
Sbjct: 188 LFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDIDLT---KFR 244
Query: 166 DSMQGVIGVGPHVPKTKALE-NFRVRWKRNFLQENPSI--VDVELNIFGLLAYDATRALA 222
+S V G V T + +W+ N +E P + + L YD R +A
Sbjct: 245 ESGANVTGF-QLVNYTDTVPARIMQQWRNNDARELPRVDWKRPKATYTSALTYDGVRVMA 303
Query: 223 EAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQ 281
EA + + + + A Q G + +AL RF+GL+G+ F + G+
Sbjct: 304 EAFQNLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLSGNVQFNEKGR 362
Query: 282 LQSSAFEIINV-NNGARGVGFWTPEK 306
+ +I + ++G R +G+W ++
Sbjct: 363 RTNYTLHVIEMKHDGIRKIGYWNEDE 388
Score = 85 (35.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 50/222 (22%), Positives = 88/222 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 592 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 649
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 650 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 705
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L V+ A
Sbjct: 706 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLA 765
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
+L ++E + +++ W+ C D+ + + +L L++
Sbjct: 766 VLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 807
Score = 42 (19.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL ++
Sbjct: 114 PVETSNQFVLQLRPELQDALISV 136
Score = 40 (19.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 53 IKAFG-WRE---AVPIYVDNQYGEEMIPSLTDALQAIDTRV--PY 91
I+ G W E VP+ +D Q G E SL + + T + PY
Sbjct: 378 IRKIGYWNEDEKLVPVAIDTQTGNEST-SLQNRTYIVTTILEDPY 421
>ZFIN|ZDB-GENE-020125-5 [details] [associations]
symbol:gria3a "glutamate receptor, ionotropic, AMPA
3a" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
HOVERGEN:HBG051839 KO:K05199 EMBL:AF525745 IPI:IPI00483360
RefSeq:NP_938153.1 UniGene:Dr.133590 ProteinModelPortal:Q71E61
SMR:Q71E61 GeneID:170452 KEGG:dre:170452 CTD:170452
InParanoid:Q71E61 NextBio:20797093 Uniprot:Q71E61
Length = 886
Score = 161 (61.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 62/253 (24%), Positives = 103/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + ++N +V ++ G D V +TI
Sbjct: 446 GYCVDLASEIAKHVGIKYKLSIVADGKYGARDPETK-TWNGMVGELVYGRADIAVAPLTI 504
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 505 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 564
Query: 494 VL------EHRV--NEDFRGPAGQQ-------VGTSFWFSFSTMVFSQRERVIS--NLA- 535
++ E + NE+ + P + S WFS F Q+ IS +L+
Sbjct: 565 LVSRFSPYEWHLDDNEETKDPQTPPDPPNDFGIFNSLWFSLGA--FMQQGCDISPRSLSG 622
Query: 536 RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGIL 595
RIV VW F LI+ SY I + L K+ + + Y G+ G
Sbjct: 623 RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGST 679
Query: 596 KQLGFDERKLVVY 608
K+ F K+ VY
Sbjct: 680 KEF-FRRSKIAVY 691
Score = 112 (44.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 56/265 (21%), Positives = 114/265 (43%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV---ISPLAT 100
S GA+ +++ + W + V +Y D G ++ ++ ++ + +V RSV + PL
Sbjct: 137 SLRGALLSLLAHYKWEKFVYLY-DTDRGFSILQAIMESAVMNNWQVTARSVGNIVDPL-- 193
Query: 101 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRT 159
+ + + ++ Q + F++ + I E+ G ++G +I+ + G TN+ +
Sbjct: 194 --EYRRIIEEMDRRQEKRFLIDCEVERINSILEQVVIAGKNSRGYHYILANLGFTNM--S 249
Query: 160 LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATR 219
L+ V + G P + ++ F R +R +E P L L +DA
Sbjct: 250 LD-KVFPGGANITGFQIINPDSPIVQQFLQRRERLDEREFPESRSSPLKYTSALTHDAIL 308
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD 279
+AEA + + + A SQ G + +AL + +G+TG+ F
Sbjct: 309 VIAEAFRYLRRQRVDISRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDS 367
Query: 280 -GQLQSSAFEIINVN-NGARGVGFW 302
G+ + ++ + GAR +G+W
Sbjct: 368 FGRRSNYTVDVYEMKPGGARKIGYW 392
Score = 87 (35.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 52/219 (23%), Positives = 87/219 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 600 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 657
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + +G
Sbjct: 658 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFVKTTPDG 713
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + LL + +Y + + + G+G P S L VS A
Sbjct: 714 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVSLA 773
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
+L ++E + ++++ W+ C +V ++ L+
Sbjct: 774 VLKLSEQGILDKLKNKWWYDKGECGTKDSVSKDKTSALS 812
Score = 39 (18.8 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 34 YFFRGSLND-SSQAGAI-TAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPY 91
++ R S+N +S GA+ T+ I + P D Q+ +M PSL AL ++ +
Sbjct: 97 FYDRRSMNTLTSFCGALHTSFITP-----SFPTDTDVQFVLQMRPSLRGALLSLLAHYKW 151
Query: 92 RSVISPLATD 101
+ TD
Sbjct: 152 EKFVYLYDTD 161
>ZFIN|ZDB-GENE-061207-27 [details] [associations]
symbol:grin2bb "glutamate receptor, ionotropic,
N-methyl D-aspartate 2B, genome duplicate b" species:7955 "Danio
rerio" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-061207-27 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX537268 EMBL:BX901927
EMBL:BX901961 IPI:IPI00508048 ProteinModelPortal:F1RDX3
Ensembl:ENSDART00000092613 Bgee:F1RDX3 Uniprot:F1RDX3
Length = 1770
Score = 189 (71.6 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 58/226 (25%), Positives = 102/226 (45%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP +K N+T D G+C+D+ K + + + + V
Sbjct: 503 PLSGTCMRNTVPCRKQLK-LQNLTGDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVT 561
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ +G++N +V +V L VG +TI RS +DF++P+ E+G+S++V +
Sbjct: 562 NGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVS-RS 620
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH-------RVNEDFRGPAGQQ-- 510
+ + FL+P + D+WV +V E+ R D R P G
Sbjct: 621 NGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFT 680
Query: 511 VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 681 IGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 725
Score = 78 (32.5 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 30/143 (20%), Positives = 60/143 (41%)
Query: 12 KSQVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGW---REAVPIYV 66
++ +PIL S + + + + FF+ + QA + I++ + W Y
Sbjct: 192 QTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYP 251
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPS 126
+Q I S D + + ++ ++ DD K ++ +Q+ V +L+
Sbjct: 252 GHQDFVNRIRSTVDN-SFVGWELE-EVLLLDMSVDDGDSKIQNQMKKLQSPVILLYCTKE 309
Query: 127 LGSRIFEKANEIGLMNKGCVWIM 149
+ IFE A+ +GL G WI+
Sbjct: 310 EATTIFEVAHSVGLTGYGYTWIV 332
Score = 56 (24.8 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G S V AIL + +M+E+E W C + V S L
Sbjct: 836 FATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 893
Query: 715 LNS 717
+++
Sbjct: 894 VDN 896
>FB|FBgn0039916 [details] [associations]
symbol:CG9935 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0060025 "regulation
of synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR001828 EMBL:AE014135 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0015277 RefSeq:NP_001036250.1 UniGene:Dm.14094
ProteinModelPortal:Q0KIF2 SMR:Q0KIF2 STRING:Q0KIF2 PRIDE:Q0KIF2
EnsemblMetazoa:FBtr0110906 GeneID:43806 KEGG:dme:Dmel_CG9935
UCSC:CG9935-RB FlyBase:FBgn0039916 OMA:MISQIAN OrthoDB:EOG48CZB3
PhylomeDB:Q0KIF2 GenomeRNAi:43806 NextBio:835962 Bgee:Q0KIF2
Uniprot:Q0KIF2
Length = 899
Score = 190 (71.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 52/194 (26%), Positives = 91/194 (46%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + +E+ + D VP YG D +G +N +V Q+ + D VG +TI
Sbjct: 432 GFCVDILETISREVGFDYILDLVPDRKYGAKD-PETGEWNGMVAQLMKYKADLAVGSMTI 490
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
+ R + +DFT P+ G+S++ + S+ + F+ PL ++W+ +
Sbjct: 491 TYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIY 550
Query: 494 V------LEHR-VNE-DFRGPA-GQQVGT--SFWFSFSTMVFSQRE---RVISNLARIVV 539
+ +E + +N D + G Q SFWF+ T + + R +S RI+
Sbjct: 551 IVGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMST--RIIS 608
Query: 540 IVWCFVVLILTQSY 553
W F LI+ SY
Sbjct: 609 STWGFFSLIIVASY 622
Score = 108 (43.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 51/217 (23%), Positives = 84/217 (38%)
Query: 514 SFWFSFSTMVFSQRE---RVISNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
SFWF+ T + + R +S RI+ W F LI+ SY I
Sbjct: 582 SFWFTIGTFMQQSPDIYPRAMST--RIISSTWGFFSLIIVASYTANLAAFLTTERMINPI 639
Query: 571 TDVKMLIKRGD-NVGYQKGSFVLGILKQLGFDERKLV---VYNS-PEDCHELFQKG--SV 623
+ + L + + + G + + + K + + N P ++ G V
Sbjct: 640 ENAEDLASQTEISYGTLDSGSTMTFFRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRV 699
Query: 624 NGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTE 683
N G A E + ++ + C+ I T G+G P SP +S AIL + E
Sbjct: 700 NQGNYAFLMESTMLDYIVQRDCN-LTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQE 758
Query: 684 GDKMKEIEDAWFKK-HSSCPDASTVVSSR--SLGLNS 717
++ + D W+K +C +T S+ SLGL S
Sbjct: 759 RGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLES 795
Score = 74 (31.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 256 GPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIINVN-NGARGVGFWTP 304
G L+ L++ +KGLTG F DGQ ++I + + VG WTP
Sbjct: 334 GLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVGEWTP 383
>UNIPROTKB|F1P0E1 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00681402 Ensembl:ENSGALT00000027749 Uniprot:F1P0E1
Length = 819
Score = 172 (65.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 65/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + V +TI
Sbjct: 362 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 420
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 421 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 480
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 481 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 538
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 539 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 595
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 596 EF-FRRSKIAVY 606
Score = 94 (38.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 70/327 (21%), Positives = 124/327 (37%)
Query: 501 EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQ 551
ED + GP+ Q + G S WFS F Q+ IS +L+ RIV VW F LI+
Sbjct: 496 EDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIIS 553
Query: 552 SYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP 611
SY I + L K+ + + Y G+ G K+ F K+ VY
Sbjct: 554 SYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKM 609
Query: 612 ----EDCH-ELFQKGSVNGGIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTA 658
+ +F + + G + + LL + +Y + + +
Sbjct: 610 WTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSK 669
Query: 659 GFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DASTVVSSRSLGLN 716
G+G P SPL V+ A+L ++E + ++++ W+ C P D+ + + +L L+
Sbjct: 670 GYGVATPKGSPLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLS 729
Query: 717 SFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVLKNSESSFLSRIRFFLKIFVSRDL--SAH 774
+ + F ++ K + +F IR ++ ++ + +
Sbjct: 730 NVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKLTFSEAIRNKARLSITGSVGENGR 789
Query: 775 IFKDKGGMQVHSMDATEASPGSCYPAS 801
+ VHS A S G AS
Sbjct: 790 VLTPDCPKAVHSGTAIRQSSGLAVIAS 816
Score = 91 (37.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 57/266 (21%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + +V ++ D
Sbjct: 54 SLRGALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS--AICVENFNDAS 110
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L L Q + F++ + E+ +G KG +I+ + G ++ +LE
Sbjct: 111 YRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDI--SLE- 167
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ V G T + RWK+ +E P + L YD +A
Sbjct: 168 RFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 226
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E + K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 227 ETFR-----NLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 281
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + N G R VG+W
Sbjct: 282 HYGRRVNYTMDVFELKNTGPRKVGYW 307
>UNIPROTKB|F1N982 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00821478 ProteinModelPortal:F1N982
Ensembl:ENSGALT00000036434 Uniprot:F1N982
Length = 819
Score = 172 (65.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 65/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + V +TI
Sbjct: 362 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 420
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 421 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 480
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 481 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 538
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 539 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 595
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 596 EF-FRRSKIAVY 606
Score = 91 (37.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 57/266 (21%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + +V ++ D
Sbjct: 54 SLRGALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS--AICVENFNDAS 110
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L L Q + F++ + E+ +G KG +I+ + G ++ +LE
Sbjct: 111 YRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDI--SLE- 167
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ V G T + RWK+ +E P + L YD +A
Sbjct: 168 RFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 226
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E + K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 227 ETFR-----NLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 281
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + N G R VG+W
Sbjct: 282 HYGRRVNYTMDVFELKNTGPRKVGYW 307
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 53/223 (23%), Positives = 89/223 (39%)
Query: 501 EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQ 551
ED + GP+ Q + G S WFS F Q+ IS +L+ RIV VW F LI+
Sbjct: 496 EDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIIS 553
Query: 552 SYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP 611
SY I + L K+ + + Y G+ G K+ F K+ VY
Sbjct: 554 SYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKM 609
Query: 612 ----EDCH-ELFQKGSVNGGIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTA 658
+ +F + + G + + LL + +Y + + +
Sbjct: 610 WTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSK 669
Query: 659 GFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC 701
G+G P SPL + V+ A+L + E + ++++ W+ C
Sbjct: 670 GYGVATPKGSPLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 712
>UNIPROTKB|F1P0E2 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AADN02005016 EMBL:AADN02005017
EMBL:AADN02005018 IPI:IPI00581692 ProteinModelPortal:F1P0E2
Ensembl:ENSGALT00000027747 Uniprot:F1P0E2
Length = 902
Score = 172 (65.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 65/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + V +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 91 (37.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 57/266 (21%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + +V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS--AICVENFNDAS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L L Q + F++ + E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRRLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFMHGGANVTGFQLVDFSTPMVTKLMQRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E + K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----NLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + N G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKNTGPRKVGYW 390
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 53/223 (23%), Positives = 89/223 (39%)
Query: 501 EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQ 551
ED + GP+ Q + G S WFS F Q+ IS +L+ RIV VW F LI+
Sbjct: 579 EDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIIS 636
Query: 552 SYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP 611
SY I + L K+ + + Y G+ G K+ F K+ VY
Sbjct: 637 SYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKM 692
Query: 612 ----EDCH-ELFQKGSVNGGIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTA 658
+ +F + + G + + LL + +Y + + +
Sbjct: 693 WTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSK 752
Query: 659 GFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC 701
G+G P SPL + V+ A+L + E + ++++ W+ C
Sbjct: 753 GYGVATPKGSPLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 795
>RGD|2732 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=IDA] [GO:0022843 "voltage-gated cation
channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=ISO] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=IDA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=ISO;IDA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042391 "regulation of membrane
potential" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043235 "receptor
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal synaptic
plasticity" evidence=IDA] [GO:0048266 "behavioral response to pain"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560
EMBL:M83561 EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402
IPI:IPI00569872 IPI:IPI00951061 IPI:IPI00952320 PIR:S19808
RefSeq:NP_001104584.1 RefSeq:NP_001104587.1 RefSeq:NP_058937.1
UniGene:Rn.10449 PDB:1TXF PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35
PDB:2F36 PDB:2OJT PDB:2PBW PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4
PDB:2WKY PDB:3C31 PDB:3C32 PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36
PDB:3GBA PDB:3GBB PDB:3S2V PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO
PDBsum:1YCJ PDBsum:2F34 PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT
PDBsum:2PBW PDBsum:2QS1 PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4
PDBsum:2WKY PDBsum:3C31 PDBsum:3C32 PDBsum:3C33 PDBsum:3C34
PDBsum:3C35 PDBsum:3C36 PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V
PDBsum:4DLD PDBsum:4E0X ProteinModelPortal:P22756 SMR:P22756
DIP:DIP-29257N STRING:P22756 TCDB:1.A.10.1.5 PhosphoSite:P22756
PRIDE:P22756 GeneID:29559 KEGG:rno:29559 UCSC:RGD:2732
InParanoid:P22756 BindingDB:P22756 ChEMBL:CHEMBL2919
EvolutionaryTrace:P22756 NextBio:609606 ArrayExpress:P22756
Genevestigator:P22756 GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 146 (56.5 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 46/189 (24%), Positives = 76/189 (40%)
Query: 378 YCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVFN 436
YC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 478 YCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYV 537
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------XX 486
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 538 REKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIA 597
Query: 487 XXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCF 544
W H N D + SFWF ++ E + L+ RIV +W F
Sbjct: 598 RFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWF 657
Query: 545 VVLILTQSY 553
LI+ SY
Sbjct: 658 FTLIIISSY 666
Score = 95 (38.5 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 50/259 (19%), Positives = 94/259 (36%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 626 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 685
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 686 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVL 744
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 745 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 804
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ + +S +LG+ + + F+++
Sbjct: 805 KLHMMKEKWWRGNG-CPEEDSKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSR 862
Query: 746 NVLKNSESSFLSRIRFFLK 764
+ SR+RF+ +
Sbjct: 863 KNNDVEQKGKSSRLRFYFR 881
Score = 69 (29.3 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 59/290 (20%), Positives = 114/290 (39%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ S R ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDS-RDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP-SLGS 129
G + L A + ++ R + P A D K L K +++ +
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KPLLKEMKKSKEFYVIFDCSHETAA 237
Query: 130 RIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQGV--IGV-GPHVPKTKAL 184
I ++ +G+M + + T D L S ++ M G + + PHV + +
Sbjct: 238 EILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRKLNIDNPHV--SSII 294
Query: 185 ENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
E +W LQ P + L + G++ +A + +AV I S + VS +
Sbjct: 295 E----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLTVS--S 345
Query: 245 TDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
GP+ + + R+ GLTG F DG + +II++
Sbjct: 346 LQCHRHKPCALGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISL 395
Score = 40 (19.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
Score = 37 (18.1 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 371 GLTGRITFNKTDGLRKDFDLDIISLKEEG 399
>UNIPROTKB|P22756 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967
GO:GO:0007268 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0030425 GO:GO:0048266 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0032230 GO:GO:0060080
GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828 GO:GO:0048172
GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560 EMBL:M83561
EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402 IPI:IPI00569872
IPI:IPI00951061 IPI:IPI00952320 PIR:S19808 RefSeq:NP_001104584.1
RefSeq:NP_001104587.1 RefSeq:NP_058937.1 UniGene:Rn.10449 PDB:1TXF
PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35 PDB:2F36 PDB:2OJT PDB:2PBW
PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4 PDB:2WKY PDB:3C31 PDB:3C32
PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36 PDB:3GBA PDB:3GBB PDB:3S2V
PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO PDBsum:1YCJ PDBsum:2F34
PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT PDBsum:2PBW PDBsum:2QS1
PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4 PDBsum:2WKY PDBsum:3C31
PDBsum:3C32 PDBsum:3C33 PDBsum:3C34 PDBsum:3C35 PDBsum:3C36
PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V PDBsum:4DLD PDBsum:4E0X
ProteinModelPortal:P22756 SMR:P22756 DIP:DIP-29257N STRING:P22756
TCDB:1.A.10.1.5 PhosphoSite:P22756 PRIDE:P22756 GeneID:29559
KEGG:rno:29559 UCSC:RGD:2732 InParanoid:P22756 BindingDB:P22756
ChEMBL:CHEMBL2919 EvolutionaryTrace:P22756 NextBio:609606
ArrayExpress:P22756 Genevestigator:P22756
GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 146 (56.5 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 46/189 (24%), Positives = 76/189 (40%)
Query: 378 YCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVFN 436
YC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 478 YCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYV 537
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------XX 486
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 538 REKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIA 597
Query: 487 XXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCF 544
W H N D + SFWF ++ E + L+ RIV +W F
Sbjct: 598 RFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWF 657
Query: 545 VVLILTQSY 553
LI+ SY
Sbjct: 658 FTLIIISSY 666
Score = 95 (38.5 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 50/259 (19%), Positives = 94/259 (36%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 626 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 685
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 686 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVL 744
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 745 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 804
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ + +S +LG+ + + F+++
Sbjct: 805 KLHMMKEKWWRGNG-CPEEDSKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSR 862
Query: 746 NVLKNSESSFLSRIRFFLK 764
+ SR+RF+ +
Sbjct: 863 KNNDVEQKGKSSRLRFYFR 881
Score = 69 (29.3 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 59/290 (20%), Positives = 114/290 (39%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ S R ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDS-RDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP-SLGS 129
G + L A + ++ R + P A D K L K +++ +
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KPLLKEMKKSKEFYVIFDCSHETAA 237
Query: 130 RIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQGV--IGV-GPHVPKTKAL 184
I ++ +G+M + + T D L S ++ M G + + PHV + +
Sbjct: 238 EILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRKLNIDNPHV--SSII 294
Query: 185 ENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
E +W LQ P + L + G++ +A + +AV I S + VS +
Sbjct: 295 E----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLTVS--S 345
Query: 245 TDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
GP+ + + R+ GLTG F DG + +II++
Sbjct: 346 LQCHRHKPCALGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISL 395
Score = 40 (19.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
Score = 37 (18.1 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 371 GLTGRITFNKTDGLRKDFDLDIISLKEEG 399
>UNIPROTKB|B7Z1W1 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AC010613
EMBL:AC025156 EMBL:AC091960 EMBL:AC091962 UniGene:Hs.519693
UniGene:Hs.737709 HGNC:HGNC:4571 HOVERGEN:HBG051839 EMBL:AK294011
IPI:IPI00956375 SMR:B7Z1W1 STRING:B7Z1W1 Ensembl:ENST00000537037
Uniprot:B7Z1W1
Length = 716
Score = 166 (63.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 391 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 449
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 450 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 509
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 510 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 567
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 568 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 624
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 625 EF-FRRSKIAVF 635
Score = 93 (37.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 86 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 141
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 142 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 201
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 202 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 255
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 256 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 310
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 311 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 339
Score = 42 (19.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 68 PVDTSNQFVLQLRPELQDALISI 90
>UNIPROTKB|F1NAD5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0043523 "regulation
of neuron apoptotic process" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0043197 GO:GO:0035235 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:CSFYTVG
EMBL:AADN02016072 EMBL:AADN02016073 EMBL:AADN02016074
EMBL:AADN02016075 EMBL:AADN02016076 EMBL:AADN02016077
EMBL:AADN02016078 EMBL:AADN02016079 IPI:IPI00591618
Ensembl:ENSGALT00000016932 Uniprot:F1NAD5
Length = 908
Score = 144 (55.7 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 52/219 (23%), Positives = 85/219 (38%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAV 427
+P G+ +DV +A+ L + P YG P GS+N L+ ++ D
Sbjct: 364 KPKKYQGFSIDVLEALANYLGFKYEIYVAPDHKYGSPQ--DDGSWNGLIGELVFKRADIG 421
Query: 428 VGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+ +TI +R N VDFT Y + V +++ K K + + L P LW
Sbjct: 422 ISALTITPDRENVVDFTTRYMDYSVGVLLR-KAEKTVDMFACLAPFDLSLWACIAGTVLL 480
Query: 488 XXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L +N R G T S WF + + V E + LA R+++ W
Sbjct: 481 VGLLVYLLNW-LNPP-RLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMGAW 538
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
LI+ SY I ++ L ++ D
Sbjct: 539 WLFALIVISSYTANLAAFLTITRIENSIQSLQDLSRQTD 577
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 70/298 (23%), Positives = 121/298 (40%)
Query: 29 SIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG----EEMIPSLTD---- 80
S+R P + LND I +I + W++ + I+ DN Y +E + ++
Sbjct: 46 SVRPPVY----LND-----VILRVITEYAWQKFI-IFYDNDYDIRGIQEFLDKVSQQGMD 95
Query: 81 -ALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIG 139
ALQ ++ + +I+ L +IE EL + + R IL M P + E
Sbjct: 96 VALQKVENNI--NKMITGLFATMRIE-ELNR-YRDTLRRAILVMNPLTAKSFLTEVVETN 151
Query: 140 LMNKGCVWIM-TDGMTNL-LRTLEPSVIDSMQGVIGVGPHVPKTKALENFRVRWK-RNFL 196
L+ C WI+ + +++L ++ L I + + P VP+ + FR + + L
Sbjct: 152 LVAFDCHWIIINEEISDLDVQELVRRSIGRLTIIRQTFP-VPQNISQRCFRGNHRISSSL 210
Query: 197 QENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNG 256
+ + I L YD LA A K +++ + + + Q G
Sbjct: 211 CDPKDPFSQSMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLTCIRKNSKPW---QGG 267
Query: 257 PKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNG---ARGV---GFWTPEKG 307
+L+ + GLTG+ F + G + FEI+ N G RG+ G W P G
Sbjct: 268 RSMLETIKKGGVNGLTGELEFAENGGNPNVHFEILGTNYGEDLGRGIRKLGCWNPITG 325
Score = 62 (26.9 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 624 NGGIAAAFDE--IPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNV 681
+G A +D + Y+ + G CS Y + G+G SP S+ IL +
Sbjct: 635 HGNYAFVWDAAVLEYVAINDGD-CSFYT-VGNTVADRGYGIALQHGSPYRDVFSQRILEL 692
Query: 682 TEGDKMKEIEDAWFKKHSSCPDASTVVSSR---SLGLNSF 718
+ M ++ W+ K+ C S+V + + +L + SF
Sbjct: 693 QQNGDMDILKHKWWPKNGQCDFYSSVDTKQKGGALDIKSF 732
>UNIPROTKB|J9NUD0 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:EEQAFRF EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 Ensembl:ENSCAFT00000048003 Uniprot:J9NUD0
Length = 918
Score = 146 (56.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 46/192 (23%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N ++ ++ + D V +TI
Sbjct: 518 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 575
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 576 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 635
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 636 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 695
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 696 WWFFTLIIISSY 707
Score = 116 (45.9 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 71/316 (22%), Positives = 138/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 172 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 230
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + PL +DD + KE+ + + R+ I
Sbjct: 231 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLLKEMKR--GREFRI-I 284
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 285 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 343
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 344 PHV--SAIVE----KWSMERLQAAPRAESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 391
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 392 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 451
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P +G
Sbjct: 452 KEDGLEKVGVWSPAEG 467
Score = 64 (27.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/178 (20%), Positives = 66/178 (37%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 667 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 726
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 727 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 786
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEG 684
A E ++ + + C+ I + G+G P+ SP ++ AIL+ G
Sbjct: 787 DYALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILSAAGG 843
>UNIPROTKB|F1PDR1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03003077 Ensembl:ENSCAFT00000028234
Uniprot:F1PDR1
Length = 806
Score = 166 (63.5 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 93 (37.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 248 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 301
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 302 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 86 (35.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 47/204 (23%), Positives = 80/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGEC 787
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>MGI|MGI:95811 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA4 (alpha 4)"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050804 "regulation of
synaptic transmission" evidence=ISO] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95811 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0045202 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2893 KO:K05200 OrthoDB:EOG4DBTD0 ChiTaRS:GRIA4
GO:GO:0032983 EMBL:AB022913 EMBL:AB079073 EMBL:BC060697
IPI:IPI00131471 RefSeq:NP_001106651.1 RefSeq:NP_001106652.1
RefSeq:NP_062665.3 UniGene:Mm.209263 ProteinModelPortal:Q9Z2W8
SMR:Q9Z2W8 IntAct:Q9Z2W8 STRING:Q9Z2W8 PhosphoSite:Q9Z2W8
PaxDb:Q9Z2W8 PRIDE:Q9Z2W8 Ensembl:ENSMUST00000063508 GeneID:14802
KEGG:mmu:14802 UCSC:uc009obo.2 InParanoid:Q9Z2W8 BindingDB:Q9Z2W8
ChEMBL:CHEMBL3615 NextBio:286965 Bgee:Q9Z2W8 CleanEx:MM_GRIA4
Genevestigator:Q9Z2W8 GermOnline:ENSMUSG00000025892 Uniprot:Q9Z2W8
Length = 902
Score = 173 (66.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 87 (35.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>RGD|61863 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IMP;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007268 "synaptic
transmission" evidence=IMP;TAS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA;IMP] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050803
"regulation of synapse structure and activity" evidence=TAS]
[GO:0050804 "regulation of synaptic transmission" evidence=IMP]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069
GO:GO:0060992 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0050803 GO:GO:0043195 GO:GO:0051968 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893
KO:K05200 OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037
EMBL:M38063 EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131
IPI:IPI00231132 PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1
RefSeq:NP_058959.2 UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS
PDB:3FAT PDB:3KEI PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE
PDBsum:3FAS PDBsum:3FAT PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA
ProteinModelPortal:P19493 SMR:P19493 DIP:DIP-41142N MINT:MINT-86166
STRING:P19493 TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493
GeneID:29629 KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493
BindingDB:P19493 ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493
NextBio:609852 ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 173 (66.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 87 (35.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|G3V6W0 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
CTD:2893 KO:K05200 RefSeq:NP_058959.2 UniGene:Rn.10938 GeneID:29629
KEGG:rno:29629 NextBio:609852 ProteinModelPortal:G3V6W0
Ensembl:ENSRNOT00000009514 Uniprot:G3V6W0
Length = 902
Score = 173 (66.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 87 (35.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|G3V6W1 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 CTD:2893 KO:K05200 OMA:RIGYWND
RefSeq:NP_001106655.1 UniGene:Rn.10938 GeneID:29629 KEGG:rno:29629
NextBio:609852 ProteinModelPortal:G3V6W1 Ensembl:ENSRNOT00000009542
Uniprot:G3V6W1
Length = 902
Score = 173 (66.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 87 (35.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|P19493 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069 GO:GO:0060992
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0050803
GO:GO:0043195 GO:GO:0051968 GO:GO:0032281 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893 KO:K05200
OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037 EMBL:M38063
EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131 IPI:IPI00231132
PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1 RefSeq:NP_058959.2
UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS PDB:3FAT PDB:3KEI
PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE PDBsum:3FAS PDBsum:3FAT
PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA ProteinModelPortal:P19493
SMR:P19493 DIP:DIP-41142N MINT:MINT-86166 STRING:P19493
TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493 GeneID:29629
KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493 BindingDB:P19493
ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493 NextBio:609852
ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 173 (66.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 87 (35.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>ZFIN|ZDB-GENE-020125-1 [details] [associations]
symbol:gria1a "glutamate receptor, ionotropic, AMPA
1a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05197 EMBL:AF525741
IPI:IPI00512681 RefSeq:NP_991161.1 UniGene:Dr.88082
ProteinModelPortal:Q71E65 SMR:Q71E65 GeneID:798689 KEGG:dre:798689
CTD:798689 InParanoid:Q71E65 NextBio:20933517 Uniprot:Q71E65
Length = 914
Score = 135 (52.6 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y V YG D + +N +V ++ G+ D V +TI
Sbjct: 435 GYCVELAAEIAKHVGYHYILKIVADGKYGARDAETM-MWNGMVGELVYGKADVAVAPLTI 493
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 494 TLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWM 539
Score = 93 (37.8 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 50/205 (24%), Positives = 81/205 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 609 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 666
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVV------YNSPEDCHELFQKGSVN 624
+ L K+ + + Y G+ G K+ F K+ V Y D +F K +
Sbjct: 667 ESAEDLAKQTE-IAY--GTLDAGSTKEF-FRRSKIAVFEKMWSYMKSAD-PSVFVKTTDE 721
Query: 625 GGIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSK 676
G + + Y LL + +Y + + + G+G P SPL + V+
Sbjct: 722 GVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNPVNL 781
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSC 701
A+L + E + ++++ W+ C
Sbjct: 782 AVLKLNEQGLLDKLKNKWWYDKGEC 806
Score = 79 (32.9 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 55/274 (20%), Positives = 114/274 (41%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +I+ + W + V +Y + L+ + +DT + +++ + + E
Sbjct: 131 ALVGVIEHYRWSKFVYMYSSDS-------GLSVLQKVLDTAAEHNWLVTSVNVETMTEAS 183
Query: 108 LYKLFT-----MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTL 160
K+F + ++ I L L S I +K E+G K +I+ + G ++ L
Sbjct: 184 FLKVFQDLDKKKEGQIIIDCELERLTS-ILKKIIELGKNVKSYHYILANLGFLDIDLTEF 242
Query: 161 EPSV--IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q V P+V +T +W F ++ + L G L YD
Sbjct: 243 KKGEANVTGFQLVNYADPNVSRTVQ------QWME-FDNKDAKVPKRRLKYTGALTYDGV 295
Query: 219 RALAEAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGD 274
+ ++ A + + + ++SR NA + A + G + +AL R +GLTG
Sbjct: 296 KVMSTAFQ-----NLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIEGLTGH 350
Query: 275 YIFVD-GQLQSSAFEIINVN-NGARGVGFWTPEK 306
F + G+ + + ++ + G + VG+W ++
Sbjct: 351 IQFNEKGRRTNYSISVMELRPTGPKKVGYWNEDE 384
Score = 38 (18.4 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 6 IIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLND-SSQAGAITAIIKAFGWREAVPI 64
+++LGN + S S + +I Y R ++N S GA+ + P+
Sbjct: 60 MVKLGNSFSMTYAFCSQFSKGVYAIIGVYD-RKTVNMLMSFCGALHVCFVT----PSFPM 114
Query: 65 YVDNQYGEEMIPSLTDALQAI 85
NQ+ ++ P L DAL +
Sbjct: 115 ENSNQFVIQLRPELQDALVGV 135
>UNIPROTKB|E7ENK3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790860
ProteinModelPortal:E7ENK3 SMR:E7ENK3 Ensembl:ENST00000327783
OMA:KELIDHR ArrayExpress:E7ENK3 Bgee:E7ENK3 Uniprot:E7ENK3
Length = 949
Score = 152 (58.6 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 657 FFTLIIISSY 666
Score = 97 (39.2 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 52/259 (20%), Positives = 93/259 (35%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 626 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 685
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 686 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVL 744
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 745 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 804
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ +S +LG+ + + FI++
Sbjct: 805 KLHMMKEKWWRGNG-CPEEDNKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSR 862
Query: 746 NVLKNSESSFLSRIRFFLK 764
+ SRIRF+ +
Sbjct: 863 KNNDIEQKGKSSRIRFYFR 881
Score = 57 (25.1 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 59/295 (20%), Positives = 118/295 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + AI ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 233
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 234 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 290
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 291 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 342
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
VS + + GP+ + + R+ GLTG F +G + +II++
Sbjct: 343 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KTN R DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
Score = 40 (19.1 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
>UNIPROTKB|F1PDP9 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2890 KO:K05197 OMA:ARIMQQW EMBL:AAEX03003077
RefSeq:XP_853398.1 ProteinModelPortal:F1PDP9
Ensembl:ENSCAFT00000028256 GeneID:489168 KEGG:cfa:489168
Uniprot:F1PDP9
Length = 906
Score = 166 (63.5 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 93 (37.8 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 248 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 301
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 302 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 86 (35.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 47/204 (23%), Positives = 80/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGEC 787
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>UNIPROTKB|P42261 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007616 "long-term memory" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030425 "dendrite"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0008066 "glutamate
receptor activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0009986 "cell
surface" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0044309 "neuron spine" evidence=ISS] [GO:0030165
"PDZ domain binding" evidence=ISS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 GO:GO:0009986 EMBL:CH471062 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 DrugBank:DB00142 GO:GO:0030288
GO:GO:0032281 GO:GO:0031623 GO:GO:0030165 GO:GO:0032590
DrugBank:DB01159 InterPro:IPR001828 DrugBank:DB01189
DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028 DrugBank:DB01236
GO:GO:0030666 Pathway_Interaction_DB:ephbfwdpathway
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 EMBL:M64752 EMBL:X58633 EMBL:M81886
EMBL:AK295039 EMBL:AK295827 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 EMBL:BC111734 IPI:IPI00030880
IPI:IPI00219124 PIR:A40222 PIR:A41273 PIR:S25852 PIR:S38723
RefSeq:NP_000818.2 RefSeq:NP_001107655.1 RefSeq:NP_001244948.1
RefSeq:NP_001244950.1 RefSeq:NP_001244952.1 UniGene:Hs.519693
UniGene:Hs.737709 ProteinModelPortal:P42261 SMR:P42261
DIP:DIP-41487N MINT:MINT-271172 STRING:P42261 PhosphoSite:P42261
DMDM:116242505 PaxDb:P42261 PRIDE:P42261 Ensembl:ENST00000285900
Ensembl:ENST00000340592 Ensembl:ENST00000518142
Ensembl:ENST00000544403 Ensembl:ENST00000544794 GeneID:2890
KEGG:hsa:2890 UCSC:uc003luy.4 UCSC:uc003lva.4 CTD:2890
GeneCards:GC05P152850 H-InvDB:HIX0032120 HGNC:HGNC:4571
HPA:CAB001965 MIM:138248 neXtProt:NX_P42261 PharmGKB:PA28966
HOVERGEN:HBG051839 KO:K05197 OrthoDB:EOG479F6B PhylomeDB:P42261
BindingDB:P42261 ChEMBL:CHEMBL2009 GenomeRNAi:2890 NextBio:11425
ArrayExpress:P42261 Bgee:P42261 CleanEx:HS_GRIA1
Genevestigator:P42261 GermOnline:ENSG00000155511 GO:GO:0015277
Uniprot:P42261
Length = 906
Score = 166 (63.5 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 93 (37.8 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 248 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 301
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 302 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 86 (35.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 47/204 (23%), Positives = 80/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGEC 787
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>UNIPROTKB|Q38PU8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0014069
"postsynaptic density" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0043197 "dendritic
spine" evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0005789 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 EMBL:DQ159929 HSSP:P19491
ProteinModelPortal:Q38PU8 SMR:Q38PU8 Uniprot:Q38PU8
Length = 906
Score = 166 (63.5 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 93 (37.8 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 248 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 301
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 302 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 86 (35.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 47/204 (23%), Positives = 80/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGEC 787
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>UNIPROTKB|E7ESV8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
KO:K05197 OMA:ARIMQQW IPI:IPI00978580 ProteinModelPortal:E7ESV8
SMR:E7ESV8 Ensembl:ENST00000518783 UCSC:uc011dcz.2
ArrayExpress:E7ESV8 Bgee:E7ESV8 Uniprot:E7ESV8
Length = 916
Score = 166 (63.5 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 447 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 505
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 565
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 566 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 623
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 624 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 680
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 681 EF-FRRSKIAVF 691
Score = 93 (37.8 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 197
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 198 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 257
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 258 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 311
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 312 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 366
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 395
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 47/204 (23%), Positives = 80/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 600 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 657
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 658 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 713
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 714 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 773
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 774 VLKLNEQGLLDKLKNKWWYDKGEC 797
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 124 PVDTSNQFVLQLRPELQDALISI 146
>UNIPROTKB|B7Z9G9 [details] [associations]
symbol:GRIA1 "cDNA, FLJ78833, highly similar to Glutamate
receptor 1" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
HOVERGEN:HBG051839 KO:K05197 EMBL:AK315934 IPI:IPI00978580
RefSeq:NP_001244951.1 SMR:B7Z9G9 STRING:B7Z9G9
Ensembl:ENST00000448073 UCSC:uc011dcy.2 Uniprot:B7Z9G9
Length = 916
Score = 166 (63.5 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 447 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 505
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 565
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 566 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 623
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 624 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 680
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 681 EF-FRRSKIAVF 691
Score = 93 (37.8 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 56/269 (20%), Positives = 120/269 (44%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 197
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 198 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 257
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 258 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 311
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
EA + S + ++SR NA D A G + +AL RF+GLTG+ F
Sbjct: 312 EAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFN 366
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+ G+ + +I + ++G R +G+W +
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWNED 395
Score = 85 (35.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 50/222 (22%), Positives = 88/222 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 600 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 657
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 658 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 713
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L V+ A
Sbjct: 714 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLA 773
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
+L ++E + +++ W+ C D+ + + +L L++
Sbjct: 774 VLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 815
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 124 PVDTSNQFVLQLRPELQDALISI 146
>UNIPROTKB|G3V164 [details] [associations]
symbol:GRIA4 "Glutamate receptor, ionotrophic, AMPA 4,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471065 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 UniGene:Hs.503743
HGNC:HGNC:4574 ChiTaRS:GRIA4 EMBL:AP001023 SMR:G3V164
Ensembl:ENST00000393127 Ensembl:ENST00000525187 Uniprot:G3V164
Length = 884
Score = 173 (66.0 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 85 (35.0 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVIKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|Q13224 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016594 "glycine binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0007611
"learning or memory" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0043005 "neuron
projection" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0030018 GO:GO:0071363
GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0043005
GO:GO:0007616 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0001975 GO:GO:0014049 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043083
GO:GO:0010942 GO:GO:0001508 GO:GO:0008306 GO:GO:0043113
GO:GO:0009743 Pathway_Interaction_DB:reelinpathway GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597 GO:GO:0060416
GO:GO:0071230 GO:GO:0071396 DrugBank:DB00836 Orphanet:178469
GO:GO:0001964 GO:GO:0050806 GO:GO:0032026 DrugBank:DB00502
DrugBank:DB01043 DrugBank:DB00949 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM
EMBL:U90278 EMBL:U88963 EMBL:U11287 EMBL:BC113618 EMBL:BC113620
EMBL:U28758 EMBL:U28861 EMBL:U28862 IPI:IPI00297933 PIR:I39066
PIR:S52086 RefSeq:NP_000825.2 UniGene:Hs.654430 PDB:1S11 PDB:1S2S
PDB:2IPV PDBsum:1S11 PDBsum:1S2S PDBsum:2IPV
ProteinModelPortal:Q13224 SMR:Q13224 IntAct:Q13224 MINT:MINT-127466
STRING:Q13224 PhosphoSite:Q13224 DMDM:14548162 PaxDb:Q13224
PeptideAtlas:Q13224 PRIDE:Q13224 Ensembl:ENST00000279593
GeneID:2904 KEGG:hsa:2904 UCSC:uc001rbt.2 GeneCards:GC12M013614
H-InvDB:HIX0036873 HGNC:HGNC:4586 MIM:138252 MIM:613970
neXtProt:NX_Q13224 PharmGKB:PA28980 InParanoid:Q13224 OMA:CTNRSHL
PhylomeDB:Q13224 BindingDB:Q13224 ChEMBL:CHEMBL1904 GenomeRNAi:2904
NextBio:11499 ArrayExpress:Q13224 Bgee:Q13224 CleanEx:HS_GRIN2B
Genevestigator:Q13224 GermOnline:ENSG00000150086 Uniprot:Q13224
Length = 1484
Score = 177 (67.4 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 53/208 (25%), Positives = 97/208 (46%)
Query: 363 VTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQ 418
VT + +EP + G+C+D+ K + + + + V G+ +G++N ++ +
Sbjct: 441 VTENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGE 500
Query: 419 VFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW 478
V + VG +TI RS VDF++P+ E+G+S++V + + + FL+P + D+W
Sbjct: 501 VVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVW 559
Query: 479 VTXXXXXXXXXXXX-WVLEH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRE 528
V +V E+ R D R P G +G + W + +VF+
Sbjct: 560 VMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSV 618
Query: 529 RVIS---NLARIVVIVWCFVVLILTQSY 553
V + ++I+V VW F +I SY
Sbjct: 619 PVQNPKGTTSKIMVSVWAFFAVIFLASY 646
Score = 79 (32.9 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 31/139 (22%), Positives = 58/139 (41%)
Query: 16 PILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYG 71
PIL S + + + S FF+ + QA + I++ + W V Y Y
Sbjct: 122 PILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y- 179
Query: 72 EEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSR 130
++ + + ++ V+ ++ DD K +L +Q+ + +L+ +
Sbjct: 180 QDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATY 239
Query: 131 IFEKANEIGLMNKGCVWIM 149
IFE AN +GL G WI+
Sbjct: 240 IFEVANSVGLTGYGYTWIV 258
Score = 55 (24.4 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 757 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 814
Query: 715 LNS 717
+++
Sbjct: 815 IDN 817
>UNIPROTKB|P48058 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISS]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISS]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISS]
[GO:0006810 "transport" evidence=TAS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0043195 GO:GO:0051968
DrugBank:DB00142 GO:GO:0032281 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:U16129 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 EMBL:BC045546
EMBL:BC142654 EMBL:BC150209 IPI:IPI00007632 IPI:IPI00791228
RefSeq:NP_000820.3 RefSeq:NP_001070711.2 RefSeq:NP_001070712.1
RefSeq:NP_001106283.1 UniGene:Hs.503743 ProteinModelPortal:P48058
SMR:P48058 MINT:MINT-95403 STRING:P48058 PhosphoSite:P48058
DMDM:218512059 PRIDE:P48058 DNASU:2893 Ensembl:ENST00000282499
Ensembl:ENST00000393125 Ensembl:ENST00000428631
Ensembl:ENST00000530497 GeneID:2893 KEGG:hsa:2893 UCSC:uc001pix.2
CTD:2893 GeneCards:GC11P105514 H-InvDB:HIX0026176 HGNC:HGNC:4574
MIM:138246 neXtProt:NX_P48058 PharmGKB:PA28969 InParanoid:P48058
KO:K05200 OMA:RIGYWND OrthoDB:EOG4DBTD0 PhylomeDB:P48058
BindingDB:P48058 ChEMBL:CHEMBL3190 ChiTaRS:GRIA4 GenomeRNAi:2893
NextBio:11443 ArrayExpress:P48058 Bgee:P48058 CleanEx:HS_GRIA4
Genevestigator:P48058 GO:GO:0032983 Uniprot:P48058
Length = 902
Score = 173 (66.0 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 85 (35.0 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVIKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|Q38PU5 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISS] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
GO:GO:0032983 EMBL:DQ159932 ProteinModelPortal:Q38PU5 SMR:Q38PU5
Uniprot:Q38PU5
Length = 902
Score = 173 (66.0 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 85 (35.0 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 59/266 (22%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVIKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E S K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----SLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|E2RIZ6 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:RIGYWND EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023560 Uniprot:E2RIZ6
Length = 854
Score = 173 (66.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 564 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 621
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 622 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 678
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 679 EF-FRRSKIAVY 689
Score = 97 (39.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 61/240 (25%), Positives = 98/240 (40%)
Query: 501 EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQ 551
ED + GP+ Q + G S WFS F Q+ IS +L+ RIV VW F LI+
Sbjct: 579 EDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIIS 636
Query: 552 SYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN-- 609
SY I + L K+ + + Y G+ G K+ F K+ VY
Sbjct: 637 SYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKM 692
Query: 610 -----SPEDCHELFQKGSVNGGIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFK 656
S E +F + + G + + LL + +Y + +
Sbjct: 693 WTYMRSAEP--SVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLD 750
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DASTVVSSRSLG 714
+ G+G P S L V+ A+L ++E + ++++ W+ C P D+ + VS RS G
Sbjct: 751 SKGYGVATPKGSSLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKVSRRSSG 810
Score = 84 (34.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 58/266 (21%), Positives = 104/266 (39%)
Query: 44 SQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
S GA+ +++ + W V +Y D G ++ ++ + V ++ D
Sbjct: 137 SLRGALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQHGWHVS--AICVENFNDVS 193
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 162
+ L +L Q + F++ I E+ +G KG +I+ + G ++ +LE
Sbjct: 194 YRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE- 250
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
I V G T + RWK+ +E P + L YD +A
Sbjct: 251 RFIHGGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMA 309
Query: 223 EAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFV 278
E + K ++SR NA D A + G + + L R +GLTG+ F
Sbjct: 310 ETFR-----NLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFD 364
Query: 279 D-GQLQSSAFEIINVNN-GARGVGFW 302
G+ + ++ + + G R VG+W
Sbjct: 365 HYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|A9Z1Z8 [details] [associations]
symbol:GRIK3 "Glutamate receptor, ionotropic, kainate 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471059 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 HSSP:P19491 EMBL:AL355386 EMBL:AC117945
RefSeq:NP_000822.2 UniGene:Hs.128848 DNASU:2899 GeneID:2899
KEGG:hsa:2899 CTD:2899 HGNC:HGNC:4581 PharmGKB:PA28975 KO:K05203
GenomeRNAi:2899 NextBio:11475 EMBL:AL591883 EMBL:AJ249210
IPI:IPI00646850 SMR:A9Z1Z8 STRING:A9Z1Z8 Ensembl:ENST00000373093
UCSC:uc001cba.1 Uniprot:A9Z1Z8
Length = 872
Score = 147 (56.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ K + L ++ V YG D G +N +V ++ + D V +TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ GVS++ + + + FL PL+ D+W+ +
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 494 VLEHRVNEDFR-----GPAGQQVGT------SFWFSFSTMVFSQRERVISNLA-RIVVIV 541
V+ ++ P + V SFWF +++ E + L+ RI+ +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 642 WWFFTLIIISSY 653
Score = 111 (44.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 70/316 (22%), Positives = 137/316 (43%)
Query: 3 TNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAV 62
TN + + N +VP + L + + ++ + +S + AI +++ WR A
Sbjct: 118 TNAVQSICNALEVPHIQLRWKHHPLDN-KDTFYVNLYPDYASLSHAILDLVQYLKWRSAT 176
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ--IEKELYKLFTMQTRVFI 120
+Y D+ G + L A + R+ R + P+ +DD + KE+ + + R+ I
Sbjct: 177 VVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLLKEMKR--GREFRI-I 230
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVID--SMQG--VIGV-G 175
++ ++I ++A +G+M + +I T + LEP ++ G ++ V
Sbjct: 231 FDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRYSGVNLTGFRILNVDN 289
Query: 176 PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGF 235
PHV + +E +W LQ P L+ G++ DA L +AV I S +
Sbjct: 290 PHV--SAIVE----KWSMERLQAAPRSESGLLD--GVMMTDAA-LLYDAVH---IVSVCY 337
Query: 236 DKT-NVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ ++ N+ + G + + + +++GLTG +F G +II++
Sbjct: 338 QRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISL 397
Query: 293 N-NGARGVGFWTPEKG 307
+G VG W+P G
Sbjct: 398 KEDGLEKVGVWSPADG 413
Score = 105 (42.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 46/209 (22%), Positives = 85/209 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF +++ E + L+ RI+ +W F LI+ SY I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 573 VKMLIKRGD-NVGYQKGSFVLGILKQLG---FDERKLVVYNSPEDCHELFQKGSVNGGIA 628
L K+ G K + K+ F++ + + P + ++G A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 629 --AAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDK 686
A E ++ + + C+ I + G+G P+ SP ++ AIL + E DK
Sbjct: 733 DYALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 687 MKEIEDAWFKKHSSCPDASTVVSSRSLGL 715
+ +++ W++ S CP+ +S +LG+
Sbjct: 792 LHIMKEKWWRG-SGCPEEENKEAS-ALGI 818
>MGI|MGI:95821 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, NMDA2B (epsilon
2)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001964 "startle response" evidence=IGI;IMP]
[GO:0001967 "suckling behavior" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IGI;IMP] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005149 "interleukin-1
receptor binding" evidence=ISO] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity" evidence=IGI]
[GO:0005262 "calcium channel activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IGI] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007423
"sensory organ development" evidence=IMP] [GO:0007611 "learning or
memory" evidence=TAS] [GO:0007612 "learning" evidence=IMP;IDA]
[GO:0007613 "memory" evidence=ISO;IMP;IDA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014049 "positive
regulation of glutamate secretion" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030018 "Z disc" evidence=ISO] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0031749 "D2 dopamine receptor
binding" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0042596 "fear
response" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043083 "synaptic cleft" evidence=ISO] [GO:0043113 "receptor
clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043408 "regulation of MAPK cascade" evidence=ISO] [GO:0045202
"synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045471 "response to ethanol" evidence=ISO;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048167 "regulation
of synaptic plasticity" evidence=IMP] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=TAS] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=ISO]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050806 "positive regulation
of synaptic transmission" evidence=ISO] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IGI;IMP] [GO:0070588
"calcium ion transmembrane transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95821
GO:GO:0014069 GO:GO:0009986 GO:GO:0007423 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0007612 GO:GO:0008021 GO:GO:0048266
GO:GO:0050966 GO:GO:0008270 GO:GO:0001701 GO:GO:0001967
GO:GO:0060079 GO:GO:0042734 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0048168 GO:GO:0001964 GO:GO:0017146
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 CTD:2904
KO:K05210 OrthoDB:EOG4Z8XVM EMBL:D10651 EMBL:AK002963
IPI:IPI00321320 PIR:I49704 RefSeq:NP_032197.3 UniGene:Mm.436649
ProteinModelPortal:Q01097 SMR:Q01097 DIP:DIP-31568N IntAct:Q01097
MINT:MINT-135847 STRING:Q01097 PhosphoSite:Q01097 PaxDb:Q01097
PRIDE:Q01097 GeneID:14812 KEGG:mmu:14812 UCSC:uc009elq.1
InParanoid:Q01097 BindingDB:Q01097 ChEMBL:CHEMBL3442 NextBio:287003
Genevestigator:Q01097 GermOnline:ENSMUSG00000030209 Uniprot:Q01097
Length = 1482
Score = 176 (67.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V + VG +TI
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 519 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 636
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 637 FFAVIFLASY 646
Score = 79 (32.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 31/139 (22%), Positives = 58/139 (41%)
Query: 16 PILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYG 71
PIL S + + + S FF+ + QA + I++ + W V Y Y
Sbjct: 122 PILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y- 179
Query: 72 EEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSR 130
++ + + ++ V+ ++ DD K +L +Q+ + +L+ +
Sbjct: 180 QDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATY 239
Query: 131 IFEKANEIGLMNKGCVWIM 149
IFE AN +GL G WI+
Sbjct: 240 IFEVANSVGLTGYGYTWIV 258
Score = 55 (24.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 757 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 814
Query: 715 LNS 717
+++
Sbjct: 815 IDN 817
>RGD|2738 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, N-methyl D-aspartate
2B" species:10116 "Rattus norvegicus" [GO:0001101 "response to acid"
evidence=IEP] [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001662 "behavioral fear response"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=IEA;ISO]
[GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0001975
"response to amphetamine" evidence=IEP] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA;ISO;IDA] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005149 "interleukin-1 receptor binding" evidence=IPI]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0007423
"sensory organ development" evidence=IEA;ISO] [GO:0007611 "learning
or memory" evidence=TAS] [GO:0007612 "learning" evidence=IEA;ISO]
[GO:0007613 "memory" evidence=IEA;ISO;IDA] [GO:0007616 "long-term
memory" evidence=IEP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008021 "synaptic vesicle" evidence=IEA;ISO]
[GO:0008144 "drug binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009790 "embryo development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010042 "response to
manganese ion" evidence=IEP] [GO:0010350 "cellular response to
magnesium starvation" evidence=IEP] [GO:0010942 "positive regulation
of cell death" evidence=IMP;IDA] [GO:0014049 "positive regulation of
glutamate secretion" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016594
"glycine binding" evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=IEA;ISO;IDA]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0021987
"cerebral cortex development" evidence=IEP] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA] [GO:0031749
"D2 dopamine receptor binding" evidence=IPI] [GO:0032026 "response to
magnesium ion" evidence=IEP] [GO:0033555 "multicellular organismal
response to stress" evidence=IEP] [GO:0034097 "response to cytokine
stimulus" evidence=IEP] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035255 "ionotropic glutamate receptor
binding" evidence=IPI] [GO:0042165 "neurotransmitter binding"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042596 "fear response" evidence=ISO] [GO:0042734 "presynaptic
membrane" evidence=ISO;IDA] [GO:0043005 "neuron projection"
evidence=ISO;IDA] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043408 "regulation of MAPK cascade" evidence=IMP] [GO:0045202
"synapse" evidence=ISO;IDA;TAS] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEA;IEP;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IEA;ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048266 "behavioral
response to pain" evidence=IEA;ISO] [GO:0048511 "rhythmic process"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IEA;ISO] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051602 "response to electrical
stimulus" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA;ISO] [GO:0060416
"response to growth hormone stimulus" evidence=IEP] [GO:0060992
"response to fungicide" evidence=IEP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO] [GO:0071230 "cellular response
to amino acid stimulus" evidence=IEP] [GO:0071287 "cellular response
to manganese ion" evidence=IEP] [GO:0071359 "cellular response to
dsRNA" evidence=IEP] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071396 "cellular response to lipid"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738
GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966 GO:GO:0051602
GO:GO:0008270 GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975 GO:GO:0014049
GO:GO:0048511 GO:GO:0030288 GO:GO:0051707 GO:GO:0043083 GO:GO:0010942
GO:GO:0001508 GO:GO:0008306 GO:GO:0043113 GO:GO:0033555 GO:GO:0046982
GO:GO:0009743 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0051597 GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0043408 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0071359 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 TCDB:1.A.10.1.6
CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419
IPI:IPI00326061 PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711
PDB:3JPW PDB:3JPY PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY
PDBsum:3QEL PDBsum:3QEM ProteinModelPortal:Q00960 SMR:Q00960
DIP:DIP-33702N IntAct:Q00960 MINT:MINT-104014 STRING:Q00960
PhosphoSite:Q00960 PRIDE:Q00960 GeneID:24410 KEGG:rno:24410
UCSC:RGD:2738 InParanoid:Q00960 BindingDB:Q00960 ChEMBL:CHEMBL311
EvolutionaryTrace:Q00960 NextBio:603231 Genevestigator:Q00960
GermOnline:ENSRNOG00000008766 Uniprot:Q00960
Length = 1482
Score = 176 (67.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V + VG +TI
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 519 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 636
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 637 FFAVIFLASY 646
Score = 79 (32.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 31/139 (22%), Positives = 58/139 (41%)
Query: 16 PILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYG 71
PIL S + + + S FF+ + QA + I++ + W V Y Y
Sbjct: 122 PILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y- 179
Query: 72 EEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSR 130
++ + + ++ V+ ++ DD K +L +Q+ + +L+ +
Sbjct: 180 QDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATY 239
Query: 131 IFEKANEIGLMNKGCVWIM 149
IFE AN +GL G WI+
Sbjct: 240 IFEVANSVGLTGYGYTWIV 258
Score = 55 (24.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 757 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 814
Query: 715 LNS 717
+++
Sbjct: 815 IDN 817
>UNIPROTKB|Q00960 [details] [associations]
symbol:Grin2b "Glutamate receptor ionotropic, NMDA 2B"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738 GO:GO:0021987
GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0008144 GO:GO:0042220
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975
GO:GO:0014049 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043083 GO:GO:0010942 GO:GO:0001508 GO:GO:0008306
GO:GO:0043113 GO:GO:0033555 GO:GO:0046982 GO:GO:0009743
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597
GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 TCDB:1.A.10.1.6 CTD:2904 KO:K05210
OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419 IPI:IPI00326061
PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711 PDB:3JPW PDB:3JPY
PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY PDBsum:3QEL PDBsum:3QEM
ProteinModelPortal:Q00960 SMR:Q00960 DIP:DIP-33702N IntAct:Q00960
MINT:MINT-104014 STRING:Q00960 PhosphoSite:Q00960 PRIDE:Q00960
GeneID:24410 KEGG:rno:24410 UCSC:RGD:2738 InParanoid:Q00960
BindingDB:Q00960 ChEMBL:CHEMBL311 EvolutionaryTrace:Q00960
NextBio:603231 Genevestigator:Q00960 GermOnline:ENSRNOG00000008766
Uniprot:Q00960
Length = 1482
Score = 176 (67.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V + VG +TI
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 519 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 636
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 637 FFAVIFLASY 646
Score = 79 (32.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 31/139 (22%), Positives = 58/139 (41%)
Query: 16 PILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYG 71
PIL S + + + S FF+ + QA + I++ + W V Y Y
Sbjct: 122 PILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y- 179
Query: 72 EEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSR 130
++ + + ++ V+ ++ DD K +L +Q+ + +L+ +
Sbjct: 180 QDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATY 239
Query: 131 IFEKANEIGLMNKGCVWIM 149
IFE AN +GL G WI+
Sbjct: 240 IFEVANSVGLTGYGYTWIV 258
Score = 55 (24.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 757 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 814
Query: 715 LNS 717
+++
Sbjct: 815 IDN 817
>UNIPROTKB|Q5R1P3 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0007423 GO:GO:0045471 GO:GO:0046872
GO:GO:0007613 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966
GO:GO:0008270 GO:GO:0001701 GO:GO:0035235 GO:GO:0001967
GO:GO:0060079 GO:GO:0030288 GO:GO:0001662 InterPro:IPR001828
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0004972 HOVERGEN:HBG052635 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
EMBL:AB195992 RefSeq:NP_001008719.1 UniGene:Cfa.16222 HSSP:Q00959
ProteinModelPortal:Q5R1P3 SMR:Q5R1P3 STRING:Q5R1P3 PRIDE:Q5R1P3
Ensembl:ENSCAFT00000020886 GeneID:494009 KEGG:cfa:494009 CTD:2904
InParanoid:Q5R1P3 KO:K05210 OrthoDB:EOG4Z8XVM NextBio:20865538
Uniprot:Q5R1P3
Length = 1485
Score = 176 (67.0 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V + VG +TI
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 519 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 636
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 637 FFAVIFLASY 646
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 31/139 (22%), Positives = 58/139 (41%)
Query: 16 PILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYG 71
PIL S + + + S FF+ + QA + I++ + W V Y Y
Sbjct: 122 PILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y- 179
Query: 72 EEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSR 130
++ + + ++ V+ ++ DD K +L +Q+ + +L+ +
Sbjct: 180 QDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATY 239
Query: 131 IFEKANEIGLMNKGCVWIM 149
IFE AN +GL G WI+
Sbjct: 240 IFEVANSVGLTGYGYTWIV 258
Score = 55 (24.4 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 757 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 814
Query: 715 LNS 717
+++
Sbjct: 815 IDN 817
>UNIPROTKB|F1MCL3 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 CTD:2904 KO:K05210 OMA:CTNRSHL
EMBL:DAAA02014263 EMBL:DAAA02014253 EMBL:DAAA02014254
EMBL:DAAA02014255 EMBL:DAAA02014256 EMBL:DAAA02014257
EMBL:DAAA02014258 EMBL:DAAA02014259 EMBL:DAAA02014260
EMBL:DAAA02014261 EMBL:DAAA02014262 IPI:IPI00717585
RefSeq:NP_001179850.1 UniGene:Bt.61353 ProteinModelPortal:F1MCL3
Ensembl:ENSBTAT00000000263 GeneID:537804 KEGG:bta:537804
NextBio:20877218 Uniprot:F1MCL3
Length = 1497
Score = 176 (67.0 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V + VG +TI
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 519 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 636
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 637 FFAVIFLASY 646
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 31/139 (22%), Positives = 58/139 (41%)
Query: 16 PILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYG 71
PIL S + + + S FF+ + QA + I++ + W V Y Y
Sbjct: 122 PILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y- 179
Query: 72 EEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSR 130
++ + + ++ V+ ++ DD K +L +Q+ + +L+ +
Sbjct: 180 QDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATY 239
Query: 131 IFEKANEIGLMNKGCVWIM 149
IFE AN +GL G WI+
Sbjct: 240 IFEVANSVGLTGYGYTWIV 258
Score = 55 (24.4 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 757 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 814
Query: 715 LNS 717
+++
Sbjct: 815 IDN 817
>UNIPROTKB|J9P2L9 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
OMA:CTNRSHL EMBL:AAEX03015244 Ensembl:ENSCAFT00000044471
Uniprot:J9P2L9
Length = 1513
Score = 176 (67.0 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V + VG +TI
Sbjct: 487 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 546
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 547 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 605
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 606 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 664
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 665 FFAVIFLASY 674
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 31/139 (22%), Positives = 58/139 (41%)
Query: 16 PILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYG 71
PIL S + + + S FF+ + QA + I++ + W V Y Y
Sbjct: 122 PILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y- 179
Query: 72 EEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSR 130
++ + + ++ V+ ++ DD K +L +Q+ + +L+ +
Sbjct: 180 QDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATY 239
Query: 131 IFEKANEIGLMNKGCVWIM 149
IFE AN +GL G WI+
Sbjct: 240 IFEVANSVGLTGYGYTWIV 258
Score = 55 (24.4 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 785 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 842
Query: 715 LNS 717
+++
Sbjct: 843 IDN 845
>UNIPROTKB|J9NWC8 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000044506 Uniprot:J9NWC8
Length = 730
Score = 179 (68.1 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 220 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 279
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 280 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 338
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 339 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 398
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 399 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 458
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 459 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 517
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 518 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 575
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 576 FMEDLDKTWVR-YQECDSRS 594
Score = 76 (31.8 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 58 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 117
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 118 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 166
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 167 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 220
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 221 -DPVKKVI 227
Score = 43 (20.2 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGV 171
++ RV IL + ++ A + + G VW++ + N LR P I +Q +
Sbjct: 6 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLI 64
Query: 172 IG 173
G
Sbjct: 65 NG 66
>UNIPROTKB|F1N3G8 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0009986
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 GO:GO:0030288 GO:GO:0032281
GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2890
KO:K05197 OMA:ARIMQQW EMBL:DAAA02020690 EMBL:DAAA02020691
EMBL:DAAA02020692 EMBL:DAAA02020693 EMBL:DAAA02020694
EMBL:DAAA02020695 EMBL:DAAA02020696 EMBL:DAAA02020697
EMBL:DAAA02020698 EMBL:DAAA02020699 EMBL:DAAA02020700
EMBL:DAAA02020701 EMBL:DAAA02020702 IPI:IPI01000809
RefSeq:XP_002704933.2 UniGene:Bt.110838 Ensembl:ENSBTAT00000007628
GeneID:529618 KEGG:bta:529618 Uniprot:F1N3G8
Length = 837
Score = 166 (63.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 368 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 426
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 427 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 486
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 487 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 544
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 545 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 601
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 602 EF-FRRSKIAVF 612
Score = 90 (36.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 51/265 (19%), Positives = 115/265 (43%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 118
Query: 108 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTLEPSV 164
L++ L + R+ ++ + I + ++ G +I+ + G ++ L + S
Sbjct: 119 LFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESG 178
Query: 165 --IDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALA 222
+ Q ++ +P K ++ +WK + +++ + L YD + +A
Sbjct: 179 ANVTGFQ-LVNYTDTIP-AKIMQ----QWKNSDARDHTRVDWKRPKYTSALTYDGVKVMA 232
Query: 223 EAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQ 281
EA + + + + A Q G + +AL RF+GLTG+ F + G+
Sbjct: 233 EAFQNLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTGNVQFNEKGR 291
Query: 282 LQSSAFEIINV-NNGARGVGFWTPE 305
+ +I + ++G R +G+W +
Sbjct: 292 RTNYTLHVIEMKHDGIRKIGYWNED 316
Score = 86 (35.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 47/204 (23%), Positives = 80/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 521 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 578
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSP----EDCH-ELFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ + +F + + G
Sbjct: 579 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 634
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
I + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 635 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 694
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 695 VLKLNEQGLLDKLKNKWWYDKGEC 718
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L DAL +I
Sbjct: 45 PVDTSNQFVLQLRPELQDALISI 67
>WB|WBGene00001612 [details] [associations]
symbol:glr-1 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009612
"response to mechanical stimulus" evidence=IMP] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
[GO:0007631 "feeding behavior" evidence=IMP] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISS;IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0016595 "glutamate
binding" evidence=ISS] [GO:0050913 "sensory perception of bitter
taste" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0014069 "postsynaptic density" evidence=IDA] [GO:0007614
"short-term memory" evidence=IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IDA] [GO:0006972
"hyperosmotic response" evidence=IMP] [GO:0001966 "thigmotaxis"
evidence=IMP] [GO:0032589 "neuron projection membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009612 GO:GO:0007631 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0035249 GO:GO:0006972 GO:GO:0007614
InterPro:IPR001828 GO:GO:0001966 GO:GO:0016595 EMBL:FO080280
GO:GO:0032589 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
KO:K05313 GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 EMBL:U34661
PIR:B88533 PIR:S60225 RefSeq:NP_498887.2 UniGene:Cel.6005
ProteinModelPortal:P34299 SMR:P34299 STRING:P34299 PaxDb:P34299
EnsemblMetazoa:C06E1.4 GeneID:176204 KEGG:cel:CELE_C06E1.4
UCSC:C06E1.4 CTD:176204 WormBase:C06E1.4 HOGENOM:HOG000234372
InParanoid:P34299 OMA:LINIRSA NextBio:891570 GO:GO:0050913
Uniprot:P34299
Length = 962
Score = 179 (68.1 bits), Expect = 1.4e-12, Sum P(4) = 1.4e-12
Identities = 59/262 (22%), Positives = 112/262 (42%)
Query: 351 VPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGS--S 408
V +K+ + N+T + Q G+C+D+ K + ++ Y+ + G GS +
Sbjct: 471 VMIKRECLEMANLT---ECQGNNKFEGFCIDLLKLLADKIE-EFNYE-IKLGTKAGSKQA 525
Query: 409 SGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWV 468
GS++ ++ ++ G AVV +TI R VDF+ P+ +G+S+++ D ++ + +
Sbjct: 526 DGSWDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFS 585
Query: 469 FLQPLTWDLWVTXXXXXXXXXXXXWVL------EHRVNEDFRGPAGQQVGTSF------W 516
F+QPL+ ++W+ +++ E RV E RG G + F W
Sbjct: 586 FMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRVEETSRG--GFTISNDFSVYNCLW 643
Query: 517 FSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKM 575
F+ + + + + +++ RI W F +I+ SY I V+
Sbjct: 644 FTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAPIESVED 703
Query: 576 LIKRGD-NVGYQKGSFVLGILK 596
L K+ G Q G K
Sbjct: 704 LAKQSKIKYGIQGGGSTASFFK 725
Score = 79 (32.9 bits), Expect = 1.4e-12, Sum P(4) = 1.4e-12
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 659 GFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
G+G P S ++ AIL + E ++K++E+ W+ C DA V S LN
Sbjct: 796 GYGIATPFGSDWKDHINLAILALQERGELKKLENKWWYDRGQC-DAGITVDGSSASLN 852
Score = 47 (21.6 bits), Expect = 1.4e-12, Sum P(4) = 1.4e-12
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 66 VDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHML 124
VD + G E I ++DAL+ +P S ++ L+ DD +++ LF + R I +L
Sbjct: 102 VDGK-GREGIRGVSDALE-----MPLVS-LTALSNDDHQQQQFGNLFEVSVRPPISELL 153
Score = 39 (18.8 bits), Expect = 1.4e-12, Sum P(4) = 1.4e-12
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 276 IFVDGQLQSSAFEIINVNNGARGVGFWTPEK 306
+F +G + S F IIN + G +W+ +K
Sbjct: 268 MFQNGNINISGFNIINKD----GREYWSLKK 294
>ZFIN|ZDB-GENE-051202-1 [details] [associations]
symbol:grin1a "glutamate receptor, ionotropic,
N-methyl D-aspartate 1a" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:BX005379 IPI:IPI00920462
Ensembl:ENSDART00000129744 Uniprot:E7F101
Length = 966
Score = 178 (67.7 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 85/378 (22%), Positives = 151/378 (39%)
Query: 350 GVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVF--KAVIQELPYAV--AYD--FVPYGQ 403
GV +KK N TI + P G+C+D+ A+ Y V D F +
Sbjct: 446 GVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLIKLALTMNFTYEVHLVADGKFGTQER 505
Query: 404 PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 463
+ S+ +N ++ ++ G D +V +TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 506 VNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 564
Query: 464 RNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTSFW 516
F+QP LW+ ++L+ +VN + + ++ W
Sbjct: 565 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 624
Query: 517 FSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK 574
FS+ ++ S E + ARI+ +VW +I+ SY IT +
Sbjct: 625 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 684
Query: 575 --MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGI 627
L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 685 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLH 743
Query: 628 AAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKM 687
A +D ++ Q C E F++ GFG SP +VS AIL+ E M
Sbjct: 744 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILSSHENGFM 801
Query: 688 KEIEDAWFKKHSSCPDAS 705
++++ W + + C S
Sbjct: 802 EDLDKTWVR-YQECDSRS 818
Score = 75 (31.5 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 33/138 (23%), Positives = 59/138 (42%)
Query: 216 DATRALAEAVEKAGITSFGFDKTNVSRNATDLEA-FGISQNGPKLLQALSSTRF-KGLTG 273
DA +A+++++ F+K N++ I + GP + L S+++ +GLTG
Sbjct: 300 DAVAVVAQSIQEL------FEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTG 353
Query: 274 DYIFVD-GQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDS 331
F D G + + + I+N VG + + IIWPG
Sbjct: 354 RVEFNDDGDRKYAHYSILNYQKSRLIQVGIYNGTQ----------VVMNKQRKIIWPGGE 403
Query: 332 TSDPKGWEVPTNEKKLRI 349
T P+G+++ T K + I
Sbjct: 404 TERPRGFQMSTRLKIVTI 421
Score = 46 (21.3 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 13/70 (18%), Positives = 28/70 (40%)
Query: 80 DALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIG 139
D L + R P + + + L + ++ RV IL + +++ A +
Sbjct: 197 DQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSASEEDAAAVYKTARFLN 256
Query: 140 LMNKGCVWIM 149
+ G VW++
Sbjct: 257 MTGSGYVWLV 266
Score = 44 (20.5 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 14 QVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYG 71
++P++ + T S+ S +S + F R S QA +++ F W + I D+ G
Sbjct: 112 RIPVVGLT-TRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEG 170
Query: 72 EEMIPSLTDALQAIDTR 88
L L+ +T+
Sbjct: 171 RAAQKRLETLLEERETK 187
>UNIPROTKB|F1SQ84 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTNRSHL EMBL:CU463198
EMBL:CU694276 Ensembl:ENSSSCT00000000660 Uniprot:F1SQ84
Length = 1351
Score = 176 (67.0 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V + VG +TI
Sbjct: 326 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 385
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 386 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 444
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 445 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 503
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 504 FFAVIFLASY 513
Score = 75 (31.5 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 27/121 (22%), Positives = 51/121 (42%)
Query: 32 SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYGEEMIPSLTDALQAIDTRV 89
S FF+ + QA + I++ + W V Y Y ++ + + ++
Sbjct: 7 SSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGW 64
Query: 90 PYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWI 148
V+ ++ DD K +L +Q+ + +L+ + IFE AN +GL G WI
Sbjct: 65 ELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 124
Query: 149 M 149
+
Sbjct: 125 V 125
Score = 55 (24.4 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G S V AIL + +M+E+E W C + V S L
Sbjct: 624 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT--GICHNEKNEVMSSQLD 681
Query: 715 LNS 717
+++
Sbjct: 682 IDN 684
>UNIPROTKB|E2R3A6 [details] [associations]
symbol:E2R3A6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882
Pfam:PF10562 ProteinModelPortal:E2R3A6 Ensembl:ENSCAFT00000035191
Uniprot:E2R3A6
Length = 957
Score = 181 (68.8 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 81/378 (21%), Positives = 150/378 (39%)
Query: 350 GVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ------ 403
G PVKK N T + P G+C+D+ + + + + V G+
Sbjct: 449 GDPVKKVICTGPNDTSPARHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 508
Query: 404 PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 463
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 509 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 567
Query: 464 RNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTSFW 516
F+QP LW+ ++L+ +VN + + ++ W
Sbjct: 568 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 627
Query: 517 FSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK 574
FS+ ++ S E + ARI+ +VW +I+ SY IT +
Sbjct: 628 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 687
Query: 575 --MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGI 627
L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 688 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLH 746
Query: 628 AAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKM 687
A +D ++ Q C E F++ GFG SP +VS +IL E M
Sbjct: 747 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFM 804
Query: 688 KEIEDAWFKKHSSCPDAS 705
++++ W + + C S
Sbjct: 805 EDLDKTWVR-YQECDSRS 821
Score = 76 (31.8 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 287 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 346
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 347 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 395
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 396 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 449
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 450 -DPVKKVI 456
Score = 43 (20.2 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGV 171
++ RV IL + ++ A + + G VW++ + N LR P I +Q +
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLI 293
Query: 172 IG 173
G
Sbjct: 294 NG 295
>UNIPROTKB|E1C2Q1 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AADN02041869 EMBL:AADN02041870
IPI:IPI00596764 ProteinModelPortal:E1C2Q1
Ensembl:ENSGALT00000010723 Uniprot:E1C2Q1
Length = 869
Score = 127 (49.8 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 45/195 (23%), Positives = 82/195 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ K + + L + V YG P+ ++G++ +V ++ + D V +TI
Sbjct: 431 GFCVDMLKELAEILRFNYKIHLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 488
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S++ + +K + FL P + +W+ +
Sbjct: 489 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 548
Query: 494 VLEHRVNEDFRGP----AGQ--------QVGTSFWFSFSTMVFSQRERVISNLA---RIV 538
++ ++ P G+ +G S WF F Q+ I+ A R V
Sbjct: 549 LVARLTPYEWYSPHPCSQGRCNLLINQYSLGNSLWFPVGG--FMQQGSTIAPQALSTRCV 606
Query: 539 VIVWCFVVLILTQSY 553
VW LI+ SY
Sbjct: 607 SGVWWAFTLIIISSY 621
Score = 106 (42.4 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 46/199 (23%), Positives = 86/199 (43%)
Query: 115 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+T I+H S+ I +KA E+G+ + +I T+ +L R L+ S +D ++G
Sbjct: 196 KTATIIVHANASMSHTILQKAAELGMASAYYTYIFTNLEFSLQR-LD-SQLDDRVNILGF 253
Query: 175 G----PHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGI 230
H + +++ W+ N ++ L+ L +DA A+ AV++
Sbjct: 254 SIFNQSHAFFQEFVQSLNQSWQENC--DHAPFTGPALS--SALLFDAVYAVVSAVQELNR 309
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEI 289
+ + + I Q+G L+ L +GLTG F GQ + A +I
Sbjct: 310 SQ------EIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKI 363
Query: 290 I-NVNNGARGVGFWTPEKG 307
+ + ++G R +G W +G
Sbjct: 364 LQHTHSGFRQIGHWHVSEG 382
Score = 68 (29.0 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 29/130 (22%), Positives = 55/130 (42%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
T G+G P+ S + AIL + E ++++ ++ W++ CP ++ LG+
Sbjct: 731 TKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGME 788
Query: 717 SFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVLKNSESSFLS----RIRFFLKIFVSRDLS 772
+ M F+ W+ L++SE S +S + I + +D S
Sbjct: 789 NIGGIFVVLICGLIVAIFMAMLEFL---WS-LRHSEQSEVSVCQEMVTELRNIILCKD-S 843
Query: 773 AHIFKDKGGM 782
H + +GGM
Sbjct: 844 FHPRRRRGGM 853
>UNIPROTKB|I3L9I7 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0009986 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
EMBL:FP312836 Ensembl:ENSSSCT00000032251 OMA:SHERREQ Uniprot:I3L9I7
Length = 530
Score = 158 (60.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 206 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 264
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 265 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 324
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 325 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 382
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 383 IVGGVWWFFTLIIISSYTANLAAFLTERMVSP-IESAEDLAKQTE-IAY--GTLEAGSTK 438
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 439 EF-FRRSKIAVF 449
Score = 89 (36.4 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 190 RWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSR--NATDL 247
+WK + +++ + L YD + +AEA + S + ++SR NA D
Sbjct: 38 QWKTSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQ-----SLRRQRIDISRRGNAGDC 92
Query: 248 EAFGISQ--NGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVGFWT 303
A G + +AL RF+GLTG+ F + G+ + +I + ++G R +G+W
Sbjct: 93 LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWN 152
Query: 304 PE 305
+
Sbjct: 153 ED 154
>UNIPROTKB|F1PY46 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000031011 Uniprot:F1PY46
Length = 921
Score = 179 (68.1 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 427 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 486
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 487 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 545
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 546 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 605
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 606 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 665
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 666 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 724
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 725 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 782
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 783 FMEDLDKTWVR-YQECDSRS 801
Score = 76 (31.8 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 265 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 324
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 325 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 373
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 374 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 427
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 428 -DPVKKVI 434
Score = 43 (20.2 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGV 171
++ RV IL + ++ A + + G VW++ + N LR P I +Q +
Sbjct: 213 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLI 271
Query: 172 IG 173
G
Sbjct: 272 NG 273
>UNIPROTKB|L7MTP7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA]
GeneTree:ENSGT00700000104113 EMBL:AAEX03006734
Ensembl:ENSCAFT00000031003 Uniprot:L7MTP7
Length = 942
Score = 179 (68.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 448 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 507
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 508 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 566
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 567 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 626
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 627 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 686
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 687 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 745
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 746 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 803
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 804 FMEDLDKTWVR-YQECDSRS 822
Score = 76 (31.8 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 286 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 345
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 346 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 394
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 395 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 448
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 449 -DPVKKVI 455
Score = 43 (20.2 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGV 171
++ RV IL + ++ A + + G VW++ + N LR P I +Q +
Sbjct: 234 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLI 292
Query: 172 IG 173
G
Sbjct: 293 NG 294
>UNIPROTKB|Q5R1P0 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 InterPro:IPR018882
Pfam:PF10562 EMBL:AB195993 EMBL:AB195994 EMBL:AB195995
RefSeq:NP_001008717.1 UniGene:Cfa.16224 ProteinModelPortal:Q5R1P0
SMR:Q5R1P0 STRING:Q5R1P0 PRIDE:Q5R1P0 GeneID:494007 KEGG:cfa:494007
CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638 OrthoDB:EOG4CG07J
NextBio:20865536 Uniprot:Q5R1P0
Length = 943
Score = 179 (68.1 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 449 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 508
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 509 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 567
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 568 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 627
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 628 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 687
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 688 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 746
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 747 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 804
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 805 FMEDLDKTWVR-YQECDSRS 823
Score = 76 (31.8 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 287 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 346
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 347 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 395
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 396 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 449
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 450 -DPVKKVI 456
Score = 43 (20.2 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGV 171
++ RV IL + ++ A + + G VW++ + N LR P I +Q +
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLI 293
Query: 172 IG 173
G
Sbjct: 294 NG 295
>UNIPROTKB|F6Y5R7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
OMA:VYRSAAM Ensembl:ENSCAFT00000035191 EMBL:AAEX03006734
Uniprot:F6Y5R7
Length = 949
Score = 179 (68.1 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 455 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 514
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 515 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 573
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 574 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 633
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 634 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 693
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 694 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 752
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 753 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 810
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 811 FMEDLDKTWVR-YQECDSRS 829
Score = 76 (31.8 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 293 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 352
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 353 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 401
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 402 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 455
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 456 -DPVKKVI 462
Score = 43 (20.2 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGV 171
++ RV IL + ++ A + + G VW++ + N LR P I +Q +
Sbjct: 241 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLI 299
Query: 172 IG 173
G
Sbjct: 300 NG 301
>UNIPROTKB|Q5VSF9 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOGENOM:HOG000231491 HOVERGEN:HBG052638 UniGene:Hs.558334
HGNC:HGNC:4584 ChiTaRS:GRIN1 IPI:IPI00647309 SMR:Q5VSF9
STRING:Q5VSF9 Ensembl:ENST00000371555 Uniprot:Q5VSF9
Length = 922
Score = 179 (68.1 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 82/380 (21%), Positives = 151/380 (39%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+C+D+ + + + + V G+
Sbjct: 449 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 508
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 509 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 567
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEH-------RVNEDFRGPAGQQVGTS 514
+ F+QP LW+ ++L+ +VN + + ++
Sbjct: 568 PRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSA 627
Query: 515 FWFSFSTMVFSQ-RERVISNL-ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
WFS+ ++ S E + ARI+ +VW +I+ SY IT
Sbjct: 628 MWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITG 687
Query: 573 VK--MLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNG 625
+ L D Y ++ S + +Q+ R + +N E E Q N
Sbjct: 688 INDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNK 746
Query: 626 GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
A +D ++ Q C E F++ GFG SP +VS +IL E
Sbjct: 747 LHAFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENG 804
Query: 686 KMKEIEDAWFKKHSSCPDAS 705
M++++ W + + C S
Sbjct: 805 FMEDLDKTWVR-YQECDSRS 823
Score = 76 (31.8 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 287 ILGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 346
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 347 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 395
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 396 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 449
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 450 -DPVKKVI 456
Score = 42 (19.8 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
++ RV IL + ++ A + + G VW++
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 270
>UNIPROTKB|F1PG03 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023554 Uniprot:F1PG03
Length = 740
Score = 173 (66.0 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 283 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 341
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 342 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 401
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 402 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 459
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 460 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 516
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 517 EF-FRRSKIAVY 527
Score = 74 (31.1 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 108 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVID 166
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE I
Sbjct: 36 LEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLE-RFIH 92
Query: 167 SMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVE 226
V G T + RWK+ +E P + L YD +AE
Sbjct: 93 GGANVTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETFR 151
Query: 227 KAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIFVD-GQ 281
+ K ++SR NA D A + G + + L R +GLTG+ F G+
Sbjct: 152 -----NLRRQKIDISRRGNAGDCLANPAAPWGQGIDMERTLKQVRIQGLTGNVQFDHYGR 206
Query: 282 LQSSAFEIINVNN-GARGVGFW 302
+ ++ + + G R VG+W
Sbjct: 207 RVNYTMDVFELKSTGPRKVGYW 228
>UNIPROTKB|B7Z4C0 [details] [associations]
symbol:GRIA3 "cDNA FLJ51894, highly similar to Glutamate
receptor 3" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 SMART:SM00918
Pfam:PF01094 GO:GO:0016020 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899
UniGene:Hs.377070 HGNC:HGNC:4573 ChiTaRS:GRIA3 EMBL:AK297136
IPI:IPI00921875 SMR:B7Z4C0 STRING:B7Z4C0 Ensembl:ENST00000541091
UCSC:uc011muf.1 Uniprot:B7Z4C0
Length = 662
Score = 129 (50.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 437 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 541
Score = 117 (46.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 53/259 (20%), Positives = 114/259 (44%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 131 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 188
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 189 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 245
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 246 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 305
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 306 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 364
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + +G+R G+W
Sbjct: 365 YTIDVYEMKVSGSRKAGYW 383
>ZFIN|ZDB-GENE-020125-2 [details] [associations]
symbol:gria1b "glutamate receptor, ionotropic, AMPA
1b" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:BX890629 EMBL:CR749161 IPI:IPI00993241
ProteinModelPortal:F1QCH0 Ensembl:ENSDART00000129703 Bgee:F1QCH0
Uniprot:F1QCH0
Length = 930
Score = 141 (54.7 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + +N +V ++ G+ D V +TI
Sbjct: 436 GYCVELAAEIAKHVGYSYRLELVGDGKYGARDAETM-MWNGMVGELVYGKADVAVAPLTI 494
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 495 TLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWM 540
Score = 83 (34.3 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 49/204 (24%), Positives = 81/204 (39%)
Query: 514 SFWFSFSTMVFSQRERVIS--NLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXI 570
S WFS F Q+ IS +L+ RIV VW F LI+ SY I
Sbjct: 616 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 673
Query: 571 TDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNG 625
+ L K+ + + Y G+ G K+ F K+ V+ S E +F K + G
Sbjct: 674 ESAEDLAKQTE-IAY--GTLDGGSTKEF-FRRSKIAVFEKMWSYMKSAEPTVFVKTTDEG 729
Query: 626 GIAAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKA 677
+ + Y LL + +Y + + + G+G P S L + V+ A
Sbjct: 730 VVRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNPVNLA 789
Query: 678 ILNVTEGDKMKEIEDAWFKKHSSC 701
+L + E + ++++ W+ C
Sbjct: 790 VLKLNEQGLLDKLKNKWWYDKGEC 813
Score = 65 (27.9 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 207 LNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQA 262
L G L YD +A A + + + ++SR NA + A + G + +A
Sbjct: 285 LKYTGALTYDGVTVMATAFQ-----NLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRA 339
Query: 263 LSSTRFKGLTGDYIFVD-GQLQSSAFEIINVN-NGARGVGFW 302
L +F+GLTG F D G + ++ +G + VG+W
Sbjct: 340 LQQVQFEGLTGHVQFNDKGHRTNFTVSVMEFGPSGPKKVGYW 381
Score = 48 (22.0 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQ 103
PI +NQ+ ++ P L DAL A+ + + ++D +
Sbjct: 113 PIDTNNQFVIQLRPELQDALIALVEHYKWNKFVYMYSSDSE 153
Score = 41 (19.5 bits), Expect = 5.4e-11, Sum P(4) = 5.4e-11
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTD 80
A+ A+++ + W + V +Y + G ++ + D
Sbjct: 131 ALIALVEHYKWNKFVYMYSSDSEGLTVLQKILD 163
>UNIPROTKB|K7GPI4 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00918 Pfam:PF01094 InterPro:IPR001828
GeneTree:ENSGT00590000082809 EMBL:CU210872 EMBL:CU469331
EMBL:CU856192 Ensembl:ENSSSCT00000032933 Ensembl:ENSSSCT00000036560
Uniprot:K7GPI4
Length = 625
Score = 129 (50.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G D V +TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 557
Score = 116 (45.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 53/259 (20%), Positives = 113/259 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 106
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 107 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVI 165
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V+
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 166 DSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAV 225
+ G + ++ F RW R +E P + L L +DA +AEA
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 226 EKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-VDGQLQS 284
+ + + A SQ G + +AL + +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 285 SAFEIINVN-NGARGVGFW 302
++ + G+R G+W
Sbjct: 381 YTIDVYEMKVTGSRKAGYW 399
>UNIPROTKB|F8W7L6 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4572
EMBL:AC079233 EMBL:AC112240 IPI:IPI01012058
ProteinModelPortal:F8W7L6 SMR:F8W7L6 Ensembl:ENST00000323661
ArrayExpress:F8W7L6 Bgee:F8W7L6 Uniprot:F8W7L6
Length = 730
Score = 156 (60.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 397 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 455
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 456 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 515
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 516 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 573
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 574 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 630
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 631 EF-FRRSKIAVFD 642
Score = 89 (36.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 55/267 (20%), Positives = 116/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 87 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 143
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 144 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 203
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 204 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 257
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 258 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 316
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 317 QNGKRINYTINIMELKTNGPRKIGYWS 343
>ZFIN|ZDB-GENE-070821-5 [details] [associations]
symbol:grik4 "glutamate receptor, ionotropic, kainate
4" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:BX571886 EMBL:BX572079 EMBL:CR626883
EMBL:CU104717 IPI:IPI00505029 Ensembl:ENSDART00000035812
Uniprot:E7F1P4
Length = 965
Score = 125 (49.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 48/196 (24%), Positives = 84/196 (42%)
Query: 377 GYCVDVFK--AVIQELPYAVAY--DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDIT 432
G+CVD+ K A I + Y + D V YG P ++G++ +V ++ + D V +T
Sbjct: 446 GFCVDMLKELADILKFKYRIRLVGDGV-YGVP--GANGTWTGMVGELISRKADLAVAALT 502
Query: 433 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX 492
I R +DF+ P+ G+S++ + ++ + FL P + +W+
Sbjct: 503 ITAEREKVIDFSKPFMTLGISIMYRVHIGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVL 562
Query: 493 WVLEHRVNEDFRGP----AGQ--------QVGTSFWFSFSTMVFSQRERVISNLA---RI 537
+++ ++ P G+ +G SFWF F Q+ I+ A R
Sbjct: 563 FLVARLTPYEWYNPHPCLKGRCSLLINQYSLGNSFWFPVGG--FMQQGSTIAPRALSTRC 620
Query: 538 VVIVWCFVVLILTQSY 553
V VW LI+ SY
Sbjct: 621 VSGVWWAFTLIIISSY 636
Score = 115 (45.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 47/196 (23%), Positives = 86/196 (43%)
Query: 115 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+T I+ ++ I E+A+E+G+++ +I+T +LLR L+ + D ++G
Sbjct: 211 KTATIIVDANATMSHVILERASELGMLSVYYTYILTSLEFSLLR-LD-DLADQRVNIVGF 268
Query: 175 GPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRALAEAVEKAGITSF 233
++F + R++ QEN + L +DA + AV++ +
Sbjct: 269 SVFNRTHPFFQDFVLSLNRSW-QENCDHAPFAGTPLSSALLFDAVHTVVAAVQELNRSQ- 326
Query: 234 GFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEII-N 291
NV ++ I ++G L+ L +GLTG F GQ + A I+ N
Sbjct: 327 -----NVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALRIMQN 381
Query: 292 VNNGARGVGFWTPEKG 307
+G R +G W E+G
Sbjct: 382 SRDGLRQIGQWHSEQG 397
Score = 55 (24.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCP 702
T G+G PL S + AIL + E ++++ ++ W+ CP
Sbjct: 746 TKGYGIGMPLGSVYRDEFDLAILRLQEENRLEILKRKWWDG-GKCP 790
>ZFIN|ZDB-GENE-070424-223 [details] [associations]
symbol:grin2ab "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-223
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:BX005261
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:CT573178 IPI:IPI00489045
Ensembl:ENSDART00000103652 Ensembl:ENSDART00000137900
Uniprot:F1QDE5
Length = 1445
Score = 148 (57.2 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 50/220 (22%), Positives = 95/220 (43%)
Query: 347 LRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDG 406
+R VP +K D N T ++ G+C+D+ K + + + + V G+
Sbjct: 420 MRNSVPCRKHIKD--NTTEGSYVKK--CCKGFCIDILKKIARNVKFTYDLYLVTNGKHGK 475
Query: 407 SSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNA 466
+ +N +V +V + VG +TI RS +DF++P+ E+G+S++V + + +
Sbjct: 476 KINNVWNGMVGEVVYKKAVMAVGSLTINEERSEAIDFSVPFVETGISVMVS-RSNGTVSP 534
Query: 467 WVFLQPLTWDLWVTXXXXXXXXXXXXWVLEHRV-----NEDF---RGPAGQQ--VGTSFW 516
FL+P + +WV L + N + + P G +G + W
Sbjct: 535 SAFLEPFSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVW 594
Query: 517 FSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+ +VF+ V + ++ +V VW F +I SY
Sbjct: 595 LLWG-LVFNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASY 633
Score = 81 (33.6 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 34/168 (20%), Positives = 72/168 (42%)
Query: 9 LGNKSQVPILSFSATSPSLTSIR--SPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ +PIL S + + S FF+ + +A + AI++ + W +
Sbjct: 105 VSSQTSMPILGIHGGSAMTMAEKDSSSSFFQFGASLQQEALLMLAIMEEYDWHVFSVVTT 164
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPS 126
+E I ++ + R +SV++ + ++ +L +Q+ V +L+
Sbjct: 165 KFPGFQEFIATVRVTVDHSFVRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKD 224
Query: 127 LGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+ + E+A +GL G VWI+ T L + P + G+I V
Sbjct: 225 EAALVMEEARSLGLTGAGFVWIVPSLTTGNLEHI-PEAFPA--GMISV 269
Score = 60 (26.2 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 772 SAHIFKDKG-GMQVHSMDATEASPGSCYPASPSSYSQHADS 811
SAHI+ G Q++S+D+ + G YP +S H D+
Sbjct: 1083 SAHIYSQSSQGSQIYSIDSIDQEHGLHYP---DIFSDHRDN 1120
Score = 55 (24.4 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G S V AIL + +M+E+E W C + V S L
Sbjct: 744 FATTGYGIAMQKGSYWKRLVDLAILGIIGDGEMEELEAQWLT--GICHNEKNEVMSSQLD 801
Query: 715 LNS 717
+++
Sbjct: 802 VDN 804
>MGI|MGI:95808 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA1 (alpha 1)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0001965 "G-protein alpha-subunit
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IGI] [GO:0007616 "long-term memory" evidence=ISO;IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008179 "adenylate
cyclase binding" evidence=ISO] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IDA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0009986 "cell surface" evidence=IDA]
[GO:0014069 "postsynaptic density" evidence=ISO;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0031267 "small GTPase binding" evidence=ISO]
[GO:0031489 "myosin V binding" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] [GO:0031623 "receptor
internalization" evidence=ISO;IMP] [GO:0031681 "G-protein
beta-subunit binding" evidence=ISO] [GO:0031698 "beta-2 adrenergic
receptor binding" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032590 "dendrite
membrane" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043197
"dendritic spine" evidence=ISO;IDA] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044309 "neuron spine" evidence=ISO;IDA] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045838 "positive regulation of membrane potential"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=ISO] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISO] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0060076 "excitatory synapse" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95808 GO:GO:0014069
GO:GO:0009986 GO:GO:0005789 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0008021 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 HOGENOM:HOG000234372 CTD:2890 HOVERGEN:HBG051839
KO:K05197 EMBL:X57497 IPI:IPI00136965 PIR:S12874
RefSeq:NP_001106796.1 UniGene:Mm.4920 ProteinModelPortal:P23818
SMR:P23818 DIP:DIP-31970N IntAct:P23818 MINT:MINT-1897734
STRING:P23818 PhosphoSite:P23818 PaxDb:P23818 PRIDE:P23818
Ensembl:ENSMUST00000036315 GeneID:14799 KEGG:mmu:14799
UCSC:uc007izs.2 InParanoid:P23818 OMA:ARIMQQW BindingDB:P23818
ChEMBL:CHEMBL3502 ChiTaRS:GRIA1 NextBio:286953 Bgee:P23818
CleanEx:MM_GRIA1 Genevestigator:P23818
GermOnline:ENSMUSG00000020524 Uniprot:P23818
Length = 907
Score = 166 (63.5 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 87 (35.7 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 213 LAYDATRALAEAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRF 268
L YD + +AEA + S + ++SR NA D A G + +AL RF
Sbjct: 292 LTYDGVKVMAEAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRF 346
Query: 269 KGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+GLTG+ F + G+ + +I + ++G R +G+W +
Sbjct: 347 EGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 38 (18.4 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L +AL +I
Sbjct: 114 PVDTSNQFVLQLRPELQEALISI 136
>RGD|621531 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA 1"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0001965 "G-protein
alpha-subunit binding" evidence=IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0007268
"synaptic transmission" evidence=ISO] [GO:0007616 "long-term
memory" evidence=ISO;IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008179 "adenylate cyclase binding" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISO;TAS] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010226
"response to lithium ion" evidence=IEP] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0016020 "membrane" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;ISS]
[GO:0031267 "small GTPase binding" evidence=IPI] [GO:0031489
"myosin V binding" evidence=IPI] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031623 "receptor internalization"
evidence=ISO;IDA] [GO:0031681 "G-protein beta-subunit binding"
evidence=IDA] [GO:0031698 "beta-2 adrenergic receptor binding"
evidence=IPI] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISO;IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032590 "dendrite membrane" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=NAS]
[GO:0042220 "response to cocaine" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=TAS] [GO:0043005 "neuron
projection" evidence=ISO;IDA] [GO:0043025 "neuronal cell body"
evidence=ISO;IDA] [GO:0043197 "dendritic spine" evidence=ISO;IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0044309 "neuron spine"
evidence=ISO;IDA] [GO:0045202 "synapse" evidence=IDA;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045838
"positive regulation of membrane potential" evidence=IMP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0048167 "regulation of synaptic plasticity"
evidence=NAS;IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051018 "protein kinase A binding"
evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEP] [GO:0060076 "excitatory synapse" evidence=IDA]
[GO:0060992 "response to fungicide" evidence=IEP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEP]
[GO:0071359 "cellular response to dsRNA" evidence=IEP] [GO:0071363
"cellular response to growth factor stimulus" evidence=IEP]
[GO:0071375 "cellular response to peptide hormone stimulus"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] [GO:0071418 "cellular response to amine
stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531
GO:GO:0005829 GO:GO:0048167 GO:GO:0042803 GO:GO:0014069
GO:GO:0071363 GO:GO:0005789 GO:GO:0046685 GO:GO:0042493
GO:GO:0032355 GO:GO:0060992 GO:GO:0010226 GO:GO:0042220
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0051602 GO:GO:0031594 GO:GO:0007616 GO:GO:0032279
GO:GO:0035249 GO:GO:0030288 GO:GO:0032281 GO:GO:0031623
GO:GO:0001919 GO:GO:0019228 GO:GO:0008179 GO:GO:0051018
GO:GO:0021510 GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828
GO:GO:0071375 GO:GO:0060076 GO:GO:0071418 GO:GO:0071230
GO:GO:0050806 PDB:2AWW PDBsum:2AWW GO:GO:0031681 GO:GO:0004971
GO:GO:0005234 CTD:2890 HOVERGEN:HBG051839 KO:K05197 EMBL:X17184
EMBL:M36418 EMBL:M38060 IPI:IPI00231012 IPI:IPI00324555 PIR:A40170
PIR:S07059 RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 166 (63.5 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 87 (35.7 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 213 LAYDATRALAEAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRF 268
L YD + +AEA + S + ++SR NA D A G + +AL RF
Sbjct: 292 LTYDGVKVMAEAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRF 346
Query: 269 KGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+GLTG+ F + G+ + +I + ++G R +G+W +
Sbjct: 347 EGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 38 (18.4 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L +AL +I
Sbjct: 114 PVDTSNQFVLQLRPELQEALISI 136
>UNIPROTKB|P19490 [details] [associations]
symbol:Gria1 "Glutamate receptor 1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531 GO:GO:0005829
GO:GO:0048167 GO:GO:0042803 GO:GO:0014069 GO:GO:0071363
GO:GO:0005789 GO:GO:0046685 GO:GO:0042493 GO:GO:0032355
GO:GO:0060992 GO:GO:0010226 GO:GO:0042220 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051602
GO:GO:0031594 GO:GO:0007616 GO:GO:0032279 GO:GO:0035249
GO:GO:0030288 GO:GO:0032281 GO:GO:0031623 GO:GO:0001919
GO:GO:0019228 GO:GO:0008179 GO:GO:0051018 GO:GO:0021510
GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828 GO:GO:0071375
GO:GO:0060076 GO:GO:0071418 GO:GO:0071230 GO:GO:0050806 PDB:2AWW
PDBsum:2AWW GO:GO:0031681 GO:GO:0004971 GO:GO:0005234 CTD:2890
HOVERGEN:HBG051839 KO:K05197 EMBL:X17184 EMBL:M36418 EMBL:M38060
IPI:IPI00231012 IPI:IPI00324555 PIR:A40170 PIR:S07059
RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 166 (63.5 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCV++ + + + Y+ + V YG D + ++N +V ++ G D V +TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFRGPAGQ-------QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ +E+F Q + G S WFS F Q+ IS +L+ R
Sbjct: 556 LVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 613
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAGSTK 670
Query: 597 QLGFDERKLVVY 608
+ F K+ V+
Sbjct: 671 EF-FRRSKIAVF 681
Score = 87 (35.7 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 213 LAYDATRALAEAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRF 268
L YD + +AEA + S + ++SR NA D A G + +AL RF
Sbjct: 292 LTYDGVKVMAEAFQ-----SLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRF 346
Query: 269 KGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVGFWTPE 305
+GLTG+ F + G+ + +I + ++G R +G+W +
Sbjct: 347 EGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 38 (18.4 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
P+ NQ+ ++ P L +AL +I
Sbjct: 114 PVDTSNQFVLQLRPELQEALISI 136
>UNIPROTKB|G3N3K3 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060179 "male mating behavior" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043278 "response to morphine" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021586
"pons maturation" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0018964 "propylene metabolic process"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0008542 "visual
learning" evidence=IEA] [GO:0008355 "olfactory learning"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0007616 "long-term
memory" evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0021987 GO:GO:0008355 GO:GO:0014069 GO:GO:0009986
GO:GO:0043278 GO:GO:0019233 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0008344
GO:GO:0001967 GO:GO:0008542 GO:GO:0007616 GO:GO:0005509
GO:GO:0060079 GO:GO:0001975 GO:GO:0043524 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043065 GO:GO:0050770
GO:GO:0048814 GO:GO:0007585 GO:GO:0006874 GO:GO:0001661
GO:GO:0051963 GO:GO:0035176 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0060179 GO:GO:0004972
InterPro:IPR018882 Pfam:PF10562 OMA:VYRSAAM GO:GO:0021586
EMBL:DAAA02032413 EMBL:DAAA02032414 EMBL:DAAA02032415
Ensembl:ENSBTAT00000065439 Uniprot:G3N3K3
Length = 931
Score = 172 (65.6 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 83/373 (22%), Positives = 145/373 (38%)
Query: 350 GVPVKKGFSDFVNVTI--DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQ---- 403
G PVKK N T P+ P G+CVD+ + + + + V G+
Sbjct: 449 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQ 508
Query: 404 --PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDS 461
+ S+ +N ++ ++ G+ D +V +TI R+ Y++F+ P+ G++++V K+
Sbjct: 509 ERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEI 567
Query: 462 KKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFST 521
+ F+QP LW+ V ED + ++ WFS+
Sbjct: 568 PRSTLDSFMQPFQSTLWLLRPLRPRSPFGRFKVNSEEEEED-----ALTLSSAMWFSWGV 622
Query: 522 MVFSQ--RERVISNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK--MLI 577
++ S S ARI+ +VW +I+ SY IT + L
Sbjct: 623 LLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLR 682
Query: 578 KRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSPEDCHELFQKGSVNGGIAAAFD 632
D Y ++ S + +Q+ R + +N E E Q N A +D
Sbjct: 683 NPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY-ESAAEAIQAVRDNKLHAFIWD 741
Query: 633 EIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIED 692
++ Q C E F++ GFG SP +VS +IL E M++++
Sbjct: 742 SA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDK 799
Query: 693 AWFKKHSSCPDAS 705
W + + C S
Sbjct: 800 TWVR-YQECDSRS 811
Score = 76 (31.8 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 209 IFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATD-----LEAFGISQNGPKLLQAL 263
I GL + A + G+ + + N TD + I + GP + L
Sbjct: 287 IIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVL 346
Query: 264 SSTRFK-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWTPEKGXXXXXXXXXXXXX 320
S+++ G+TG F DG + + + I+N+ N VG +
Sbjct: 347 MSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-----------GTHVIP 395
Query: 321 XXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKT-QEPTSVTGYC 379
IIWPG T P+G+++ T +L+I ++ F +V T+ T +E +V G
Sbjct: 396 NDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDGTCKEEFTVNG-- 449
Query: 380 VDVFKAVI 387
D K VI
Sbjct: 450 -DPVKKVI 456
Score = 43 (20.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT--NLLRTLEPSVIDSMQGV 171
++ RV IL + ++ A + + G VW++ + N LR P I +Q +
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALR-YAPDGIIGLQLI 293
Query: 172 IG 173
G
Sbjct: 294 NG 295
>UNIPROTKB|A8MT92 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0032279
GO:GO:0042734 GO:GO:0043195 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HGNC:HGNC:4572 OrthoDB:EOG4TB49K EMBL:AC079233 EMBL:AC112240
IPI:IPI00789563 SMR:A8MT92 STRING:A8MT92 Ensembl:ENST00000393815
Ensembl:ENST00000449365 Ensembl:ENST00000507898 UCSC:uc011cit.2
Uniprot:A8MT92
Length = 836
Score = 156 (60.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 397 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 455
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 456 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 515
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 516 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 573
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 574 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 630
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 631 EF-FRRSKIAVFD 642
Score = 89 (36.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 55/267 (20%), Positives = 116/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 87 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 143
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 144 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 203
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 204 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 257
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 258 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 316
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 317 QNGKRINYTINIMELKTNGPRKIGYWS 343
>UNIPROTKB|P42262 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0007165
"signal transduction" evidence=TAS] [GO:0008066 "glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0005789
GO:GO:0060992 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0042734
GO:GO:0043195 DrugBank:DB00142 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:L20814 EMBL:BC010574
IPI:IPI00030882 IPI:IPI00219216 IPI:IPI00871510 PIR:I58181
RefSeq:NP_000817.2 RefSeq:NP_001077088.1 RefSeq:NP_001077089.1
UniGene:Hs.32763 PDB:2WJW PDB:2WJX PDB:2XHD PDB:3R7X PDB:3RN8
PDB:3RNN PDB:3UA8 PDBsum:2WJW PDBsum:2WJX PDBsum:2XHD PDBsum:3R7X
PDBsum:3RN8 PDBsum:3RNN PDBsum:3UA8 ProteinModelPortal:P42262
SMR:P42262 DIP:DIP-42852N IntAct:P42262 MINT:MINT-2791741
STRING:P42262 PhosphoSite:P42262 DMDM:23831146 PaxDb:P42262
PRIDE:P42262 Ensembl:ENST00000264426 Ensembl:ENST00000296526
GeneID:2891 KEGG:hsa:2891 UCSC:uc003ipm.4 CTD:2891
GeneCards:GC04P158141 HGNC:HGNC:4572 HPA:CAB006830 HPA:CAB007812
HPA:CAB012981 HPA:HPA008441 MIM:138247 neXtProt:NX_P42262
PharmGKB:PA28967 KO:K05198 OMA:HAVPYVS OrthoDB:EOG4TB49K
BindingDB:P42262 ChEMBL:CHEMBL4016 EvolutionaryTrace:P42262
GenomeRNAi:2891 NextBio:11429 ArrayExpress:P42262 Bgee:P42262
CleanEx:HS_GRIA2 Genevestigator:P42262 GermOnline:ENSG00000120251
Uniprot:P42262
Length = 883
Score = 156 (60.0 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 89 (36.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 55/267 (20%), Positives = 116/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>ZFIN|ZDB-GENE-020125-7 [details] [associations]
symbol:gria4a "glutamate receptor, ionotropic, AMPA
4a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-7 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05200 EMBL:AF525747
IPI:IPI01016706 RefSeq:NP_999971.1 UniGene:Dr.89716
ProteinModelPortal:Q71E59 SMR:Q71E59 GeneID:407735 KEGG:dre:407735
CTD:407735 NextBio:20818588 Uniprot:Q71E59
Length = 898
Score = 156 (60.0 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 58/251 (23%), Positives = 97/251 (38%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ V + + V YG D + +N +V ++ G+ + V + I
Sbjct: 439 GYCVDLASEVAKHIGIKYKISIVLDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLAI 497
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 498 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 557
Query: 494 VLE-------H--RVNEDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVISNLA-RI 537
++ H E GP Q + S WFS + + +L+ RI
Sbjct: 558 LVSRFSPYEWHTEEPEEGSDGPPSDQPPNEFGIFNSLWFSLGAFMQQGCDFTPRSLSGRI 617
Query: 538 VVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQ 597
V VW F LI+ SY I + L K+ + + Y G+ G K+
Sbjct: 618 VGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKE 674
Query: 598 LGFDERKLVVY 608
F K+ VY
Sbjct: 675 F-FRRSKIAVY 684
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 52/221 (23%), Positives = 87/221 (39%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
S WFS + + +L+ RIV VW F LI+ SY I
Sbjct: 593 SLWFSLGAFMQQGCDFTPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES 652
Query: 573 VKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SPEDCHE--LFQKGSVNGGI 627
+ L K+ + + Y G+ G K+ F K+ VY S E +F K + G
Sbjct: 653 AEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPTVFTKTTAEGVA 708
Query: 628 AAAFDEIPYMKLL---IGQYCSKYAMIEP-----KFKTAGFGFVFPLHSPLVHDVSKAIL 679
+ Y LL + +Y + + + G+G P S L V+ A+L
Sbjct: 709 RVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSQLGTPVNLAVL 768
Query: 680 NVTEGDKMKEIEDAWFKKHSSC-P--DASTVVSSRSLGLNS 717
++E + ++++ W+ C P S SS++L L++
Sbjct: 769 KLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKSSQALSLSN 809
Score = 89 (36.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 64/293 (21%), Positives = 117/293 (39%)
Query: 18 LSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPS 77
L S +PS + F L S + GA+ +++ + W V +Y D G ++ +
Sbjct: 108 LHISLVTPSFPAEGETQFVL-QLRPSIR-GALLSLLDHYDWSRFVFLY-DTDRGYAVLQA 164
Query: 78 LTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANE 137
+ + +V ++ D + L L Q + F++ + I E+
Sbjct: 165 IMEKAGQNGWQVS--AICVENFNDASYRRLLEDLDRRQEKKFVIDLEAERLQNILEQIVS 222
Query: 138 IGLMNKGCVWIMTD-GMTNLLRTLEPSVIDSMQGVIGVGPHVPKTKALE-NFRVRWKRNF 195
+G KG +I+ + G ++ +LE + V G V +K + RW +
Sbjct: 223 VGKHVKGYHYIVANLGFKDI--SLE-RFMHGGANVTGF-QLVDFSKPMVIKLMQRWNKLD 278
Query: 196 LQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSR--NATDLEAFGIS 253
+E P + L YD +AEA + K ++SR NA D A +
Sbjct: 279 QREYPGS-ESPPRYTSSLTYDGVLVMAEAFR-----NLRRQKIDISRRGNAGDCLANPAA 332
Query: 254 --QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVGFW 302
G + + L R +GLTG+ F G+ + ++ + +NG R +G+W
Sbjct: 333 PWNQGIDMERTLKQVRIQGLTGNIQFDHYGRRVNYTMDVFELKSNGPRKIGYW 385
>UNIPROTKB|F1LNE4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 IPI:IPI00952011 ProteinModelPortal:F1LNE4
Ensembl:ENSRNOT00000067113 ArrayExpress:F1LNE4 Uniprot:F1LNE4
Length = 756
Score = 156 (60.0 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 317 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 375
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 376 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 435
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 436 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 493
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 494 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 550
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 551 EF-FRRSKIAVFD 562
Score = 87 (35.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 7 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 63
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 64 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 123
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 124 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTATIKYTSALTYDAV 177
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 178 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 236
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 237 QNGKRINYTINIMELKTNGPRKIGYWS 263
>UNIPROTKB|F1PE26 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:HAVPYVS EMBL:AAEX03010079
Ensembl:ENSCAFT00000013743 Uniprot:F1PE26
Length = 842
Score = 156 (60.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 378 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 436
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 437 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 496
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 497 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 554
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 555 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 611
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 612 EF-FRRSKIAVFD 623
Score = 87 (35.7 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 68 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 124
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 125 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 184
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 185 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 238
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 239 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 297
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 298 QNGKRINYTINIMELKTNGPRKIGYWS 324
>UNIPROTKB|I3LHM1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:CU915394 EMBL:FP325266 Ensembl:ENSSSCT00000022356
Uniprot:I3LHM1
Length = 854
Score = 156 (60.0 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 397 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 455
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 456 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 515
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 516 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 573
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 574 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 630
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 631 EF-FRRSKIAVFD 642
Score = 87 (35.7 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 87 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 143
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 144 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 203
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 204 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 257
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 258 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 316
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 317 QNGKRINYTINIMELKTNGPRKIGYWS 343
>UNIPROTKB|F1MBY1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00908138
Ensembl:ENSBTAT00000056038 Uniprot:F1MBY1
Length = 883
Score = 156 (60.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 87 (35.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|F1MK58 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00705733
ProteinModelPortal:F1MK58 Ensembl:ENSBTAT00000006271 Uniprot:F1MK58
Length = 883
Score = 156 (60.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 87 (35.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>MGI|MGI:95809 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA2 (alpha 2)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030672 "synaptic vesicle membrane" evidence=ISO]
[GO:0031623 "receptor internalization" evidence=ISO] [GO:0032279
"asymmetric synapse" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IDA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=ISO] [GO:0043198 "dendritic shaft" evidence=ISO]
[GO:0043204 "perikaryon" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045184 "establishment of protein
localization" evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051966
"regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95809 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0032281 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 OrthoDB:EOG4TB49K EMBL:X57498
EMBL:L32204 EMBL:L32189 EMBL:L32190 EMBL:L32192 EMBL:L32194
EMBL:L32196 EMBL:L32198 EMBL:L32200 EMBL:L32202 EMBL:L32203
EMBL:L32201 EMBL:L32199 EMBL:L32197 EMBL:L32195 EMBL:L32193
EMBL:L32191 EMBL:L32372 EMBL:AK014389 EMBL:AK043490 EMBL:AK044574
EMBL:AK046861 IPI:IPI00136967 IPI:IPI00466699 IPI:IPI00608015
IPI:IPI00845711 PIR:I49695 PIR:I49696 RefSeq:NP_001034284.1
RefSeq:NP_001077275.1 RefSeq:NP_038568.2 UniGene:Mm.220224
ProteinModelPortal:P23819 SMR:P23819 IntAct:P23819
MINT:MINT-1776844 STRING:P23819 PhosphoSite:P23819 PaxDb:P23819
PRIDE:P23819 GeneID:14800 KEGG:mmu:14800 UCSC:uc008pnz.1
UCSC:uc008pof.1 BindingDB:P23819 ChEMBL:CHEMBL3205 NextBio:286957
CleanEx:MM_GRIA2 Genevestigator:P23819
GermOnline:ENSMUSG00000033981 Uniprot:P23819
Length = 883
Score = 156 (60.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 87 (35.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTATIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>RGD|61862 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA 2"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA;TAS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;ISO] [GO:0005246 "calcium channel regulator activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=TAS] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IDA;IPI]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030672 "synaptic vesicle membrane" evidence=IDA]
[GO:0031623 "receptor internalization" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=IDA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;ISS] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA;IPI]
[GO:0045184 "establishment of protein localization" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051966 "regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069
GO:GO:0051262 GO:GO:0005789 GO:GO:0060992 GO:GO:0010226
GO:GO:0007268 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0042734 GO:GO:0043195
GO:GO:0030672 GO:GO:0032281 GO:GO:0030426 GO:GO:0045184
GO:GO:0031623 GO:GO:0001919 GO:GO:0032839 GO:GO:0030165
InterPro:IPR001828 DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419
EMBL:M38061 EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 156 (60.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 87 (35.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTATIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|G3V914 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 EMBL:CH473976 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V914 Ensembl:ENSRNOT00000039587 Uniprot:G3V914
Length = 883
Score = 156 (60.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 87 (35.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTATIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|G3V938 [details] [associations]
symbol:Gria2 "Glutamate receptor, ionotropic, AMPA2,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
EMBL:CH473976 GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V938 Ensembl:ENSRNOT00000039610 Uniprot:G3V938
Length = 883
Score = 156 (60.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 87 (35.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTATIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|P19491 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069 GO:GO:0051262
GO:GO:0005789 GO:GO:0060992 GO:GO:0010226 GO:GO:0007268
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0042734 GO:GO:0043195 GO:GO:0030672
GO:GO:0032281 GO:GO:0030426 GO:GO:0045184 GO:GO:0031623
GO:GO:0001919 GO:GO:0032839 GO:GO:0030165 InterPro:IPR001828
DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419 EMBL:M38061
EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 156 (60.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 87 (35.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTATIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|Q16099 [details] [associations]
symbol:GRIK4 "Glutamate receptor ionotropic, kainate 4"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005634 GO:GO:0005887 EMBL:CH471065 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0043204
GO:GO:0042734 GO:GO:0043195 DrugBank:DB00142 InterPro:IPR001828
GO:GO:0031960 eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:S67803
EMBL:AK292726 IPI:IPI00292269 PIR:JH0826 RefSeq:NP_055434.2
UniGene:Hs.568901 ProteinModelPortal:Q16099 SMR:Q16099
STRING:Q16099 TCDB:1.A.10.1.9 PhosphoSite:Q16099 DMDM:209572625
PaxDb:Q16099 PRIDE:Q16099 Ensembl:ENST00000438375
Ensembl:ENST00000527524 GeneID:2900 KEGG:hsa:2900 UCSC:uc001pxn.2
CTD:2900 GeneCards:GC11P120480 H-InvDB:HIX0036043 HGNC:HGNC:4582
MIM:600282 neXtProt:NX_Q16099 PharmGKB:PA28976 InParanoid:Q16099
KO:K05204 OMA:NRAPERL PhylomeDB:Q16099 BindingDB:Q16099
ChEMBL:CHEMBL2829 GenomeRNAi:2900 NextBio:11479 Bgee:Q16099
CleanEx:HS_GRIK4 Genevestigator:Q16099 GermOnline:ENSG00000149403
Uniprot:Q16099
Length = 956
Score = 126 (49.4 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 45/195 (23%), Positives = 82/195 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ K + + L + V YG P+ ++G++ +V ++ + D V +TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S++ + +K + FL P + +W+ +
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 494 VLEHRVNEDFRGP----AGQ--------QVGTSFWFSFSTMVFSQRERVISNLA---RIV 538
++ ++ P G+ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 539 VIVWCFVVLILTQSY 553
VW LI+ SY
Sbjct: 622 SGVWWAFTLIIISSY 636
Score = 106 (42.4 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 47/196 (23%), Positives = 81/196 (41%)
Query: 115 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+T I+H S+ I KA E+G+++ +I T+ +L R S++D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 175 GPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRALAEAVEKAGITSF 233
+ F +++ QEN V + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFAQSLNQSW-QENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQ- 326
Query: 234 GFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIIN- 291
+ + I Q+G L+ L +GLTG F GQ + A +I+
Sbjct: 327 -----EIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQF 381
Query: 292 VNNGARGVGFWTPEKG 307
NG R +G W +G
Sbjct: 382 TRNGFRQIGQWHVAEG 397
Score = 58 (25.5 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 21/101 (20%), Positives = 43/101 (42%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
T G+G P+ S + AIL + E ++++ ++ W++ CP ++ LG+
Sbjct: 746 TKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGME 803
Query: 717 SFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVLKNSESSFLS 757
+ M F+ W L++SE++ +S
Sbjct: 804 NIGGIFVVLICGLIVAIFMAMLEFL---WT-LRHSEATEVS 840
>UNIPROTKB|Q38PU7 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
EMBL:DQ159930 ProteinModelPortal:Q38PU7 SMR:Q38PU7 Uniprot:Q38PU7
Length = 883
Score = 153 (58.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 56/251 (22%), Positives = 99/251 (39%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVISNLA-RIV 538
++ H ED R + + S WFS + + +L+ RIV
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIV 622
Query: 539 VIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQL 598
VW F LI+ SY I + L K+ + + Y G+ G K+
Sbjct: 623 GGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTKEF 679
Query: 599 GFDERKLVVYN 609
F K+ V++
Sbjct: 680 -FRRSKIAVFD 689
Score = 89 (36.4 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 55/267 (20%), Positives = 116/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYDAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|F1M5R4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951831
Ensembl:ENSRNOT00000066006 ArrayExpress:F1M5R4 Uniprot:F1M5R4
Length = 912
Score = 152 (58.6 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 440 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 499
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 500 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 559
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 560 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 619
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 620 FFTLIIISSY 629
Score = 95 (38.5 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 50/259 (19%), Positives = 94/259 (36%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 589 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 648
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 649 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVL 707
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 708 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 767
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ + +S +LG+ + + F+++
Sbjct: 768 KLHMMKEKWWRGNG-CPEEDSKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSR 825
Query: 746 NVLKNSESSFLSRIRFFLK 764
+ SR+RF+ +
Sbjct: 826 KNNDVEQKGKSSRLRFYFR 844
Score = 40 (19.1 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 48 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 81
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 334 GLTGRITFNKTDGLRKDFDLDIISLKEEG 362
>UNIPROTKB|F1NMB0 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0043408 "regulation of MAPK cascade"
evidence=ISS] [GO:0008021 "synaptic vesicle" evidence=ISS]
[GO:0014049 "positive regulation of glutamate secretion"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0045471 GO:GO:0007613
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0042734 GO:GO:0014049 GO:GO:0030288
GO:GO:0046982 InterPro:IPR001828 GO:GO:0017146 GO:GO:0043408
GO:GO:0005234 GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTNRSHL
EMBL:AADN02006024 EMBL:AADN02006025 EMBL:AADN02006026
EMBL:AADN02006027 IPI:IPI00599161 ProteinModelPortal:F1NMB0
Ensembl:ENSGALT00000019272 Uniprot:F1NMB0
Length = 1370
Score = 173 (66.0 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 49/190 (25%), Positives = 89/190 (46%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ +G++N ++ +V VG +TI
Sbjct: 323 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEE 382
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVL 495
RS VDF++P+ E+G+S++V + + + FL+P + D+WV +V
Sbjct: 383 RSEVVDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVF 441
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWC 543
E+ R D R P G +G + W + +VF+ V + ++I+V VW
Sbjct: 442 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 500
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 501 FFAVIFLASY 510
Score = 76 (31.8 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 32 SPYFFRGSLNDSSQAGAITAIIKAFGWR--EAVPIYVDNQYGEEMIPSLTDALQAIDTRV 89
S FF+ + QA + I++ + W V Y Y ++ + + ++
Sbjct: 2 SSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIEHSFVGW 59
Query: 90 PYRSVIS-PLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWI 148
V+ ++ DD K +L +Q+ V +L+ + IFE AN +GL G WI
Sbjct: 60 ELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYIFEVANSVGLTGYGYTWI 119
Query: 149 M 149
+
Sbjct: 120 V 120
Score = 43 (20.2 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 789 ATEASPGSCYPASPSS 804
AT A+ S YP SPS+
Sbjct: 1153 ATSATSSSKYPQSPSN 1168
>UNIPROTKB|F1M7M9 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0051967 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0048266 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0032230 GO:GO:0060080 GO:GO:0035249
GO:GO:0030534 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 IPI:IPI00231402 GeneTree:ENSGT00590000083056
OMA:KELIDHR ProteinModelPortal:F1M7M9 Ensembl:ENSRNOT00000050073
ArrayExpress:F1M7M9 Uniprot:F1M7M9
Length = 951
Score = 152 (58.6 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 479 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 538
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 539 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 598
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 599 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 658
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 659 FFTLIIISSY 668
Score = 95 (38.5 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 50/259 (19%), Positives = 94/259 (36%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 628 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 687
Query: 573 VKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAA 629
L K+ + Y + GS + K K+ + S L +
Sbjct: 688 ADDLAKQ-TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVL 746
Query: 630 AFDEIPYMKLLIGQYCSK----YAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGD 685
D M+ +Y ++ I + G+G P+ SP ++ AIL + E
Sbjct: 747 TTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEG 806
Query: 686 KMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXXMAVFIHQHW 745
K+ +++ W++ + CP+ + +S +LG+ + + F+++
Sbjct: 807 KLHMMKEKWWRGNG-CPEEDSKEAS-ALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSR 864
Query: 746 NVLKNSESSFLSRIRFFLK 764
+ SR+RF+ +
Sbjct: 865 KNNDVEQKGKSSRLRFYFR 883
Score = 40 (19.1 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
Score = 37 (18.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 373 GLTGRITFNKTDGLRKDFDLDIISLKEEG 401
>WB|WBGene00001615 [details] [associations]
symbol:glr-4 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371 HSSP:P19491
EMBL:FO080131 GeneID:174258 KEGG:cel:CELE_C06A8.9 CTD:174258
PIR:T15429 RefSeq:NP_001254126.1 ProteinModelPortal:Q17697
SMR:Q17697 EnsemblMetazoa:C06A8.9a UCSC:C06A8.9 WormBase:C06A8.9a
InParanoid:Q17697 OMA:IESRHEA NextBio:883261 ArrayExpress:Q17697
Uniprot:Q17697
Length = 951
Score = 148 (57.2 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 35/118 (29%), Positives = 63/118 (53%)
Query: 368 KTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEF 424
KT E G+C+D+ + Q L + V YG D SG +N ++ + E
Sbjct: 423 KTGE-NQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIED--ESGRWNGIIGALQRHEA 479
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVP--IKDSKKRNAWVFLQPLTWDLWVT 480
D + +TI ++R+ VDFTLP+ G+S+++ +++ K + W FL+PL+ +W++
Sbjct: 480 DLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVWIS 537
Score = 100 (40.3 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 49/234 (20%), Positives = 89/234 (38%)
Query: 493 WVLEHRVNE-DFRGPAGQQ----VGTSFWFSFSTMVFSQRERVISNLA--RIVVIVWCFV 545
W R++E DF Q+ V SFWF+ +++ Q VI A R++ +VW
Sbjct: 560 WYNLERIDERDFENIKNQKNQFTVLNSFWFTMGSLM-QQGSDVIPRAAATRLIAVVWWMF 618
Query: 546 VLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD-NVGYQKGSFVLGILKQ--LGFDE 602
I+ SY I + L + G K + ++ + E
Sbjct: 619 TQIIISSYTAQLAAFLTVERMSTPIESTQDLANQQKIRYGVLKSGSTMDFFRESKIPMYE 678
Query: 603 RKLVVY--NSPEDCHELFQKG--SVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTA 658
R V +SP ++G V G A E ++ + + C + I +
Sbjct: 679 RMWSVMESSSPGVFVNSSREGIARVKSGGYAYMMESSMLEYYLERDCELQS-IGGLLDSK 737
Query: 659 GFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRS 712
G+G P SPL +S+ +L + E ++ +++ W++ P S ++
Sbjct: 738 GYGIALPKGSPLRDILSRTVLQLQERTILEALKNKWWRDRREGPSCGPPPSEKA 791
Score = 39 (18.8 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 63 PIYVDNQYGEEMIPSLTDALQAI 85
PI DN Y E M + + A+
Sbjct: 69 PIRYDNNYEERMCEIMQQGIVAV 91
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 87 TRVPYRSVISPLATDDQIEKELYKL 111
T++ + S++SP+ D+ E+ + ++
Sbjct: 60 TQIKF-SIVSPIRYDNNYEERMCEI 83
>UNIPROTKB|F1PHA8 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2900 KO:K05204 OMA:NRAPERL EMBL:AAEX03003415
EMBL:AAEX03003416 EMBL:AAEX03003417 EMBL:AAEX03003418
EMBL:AAEX03003419 RefSeq:XP_853030.3 Ensembl:ENSCAFT00000018877
GeneID:610429 KEGG:cfa:610429 Uniprot:F1PHA8
Length = 956
Score = 126 (49.4 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 45/195 (23%), Positives = 82/195 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ K + + L + V YG P+ ++G++ +V ++ + D V +TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S++ + +K + FL P + +W+ +
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 494 VLEHRVNEDFRGP----AGQ--------QVGTSFWFSFSTMVFSQRERVISNLA---RIV 538
++ ++ P G+ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 539 VIVWCFVVLILTQSY 553
VW LI+ SY
Sbjct: 622 SGVWWAFTLIIISSY 636
Score = 104 (41.7 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 46/191 (24%), Positives = 79/191 (41%)
Query: 115 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+T I+H S+ I KA E+G+++ +I T+ +L R S++D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 175 GPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRALAEAVEKAGITSF 233
+ F +++ QEN V + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFAQSLNQSW-QENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQ- 326
Query: 234 GFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIIN- 291
+ + I Q+G L+ L +GLTG F GQ + A +I+
Sbjct: 327 -----EIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQF 381
Query: 292 VNNGARGVGFW 302
NG R +G W
Sbjct: 382 TRNGFRQIGQW 392
Score = 58 (25.5 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 21/101 (20%), Positives = 43/101 (42%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
T G+G P+ S + AIL + E ++++ ++ W++ CP ++ LG+
Sbjct: 746 TKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGME 803
Query: 717 SFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVLKNSESSFLS 757
+ M F+ W L++SE++ +S
Sbjct: 804 NIGGIFVVLICGLIVAIFMAMLEFL---WT-LRHSEATEVS 840
>UNIPROTKB|F1LPK4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00948300
ProteinModelPortal:F1LPK4 Ensembl:ENSRNOT00000039491
ArrayExpress:F1LPK4 Uniprot:F1LPK4
Length = 920
Score = 156 (60.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 60/253 (23%), Positives = 102/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 443 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 501
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 502 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 561
Query: 494 VLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + S WFS F Q+ IS +L+ R
Sbjct: 562 LVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 619
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 620 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 676
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 677 EF-FRRSKIAVFD 688
Score = 87 (35.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 55/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 133 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 189
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 190 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 249
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L YDA
Sbjct: 250 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTATIKYTSALTYDAV 303
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 304 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 362
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 363 QNGKRINYTINIMELKTNGPRKIGYWS 389
Score = 41 (19.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 9/46 (19%), Positives = 25/46 (54%)
Query: 674 VSKAILNVTEGDKMKEIEDAWFKKHSSC--PDASTVVSSRSLGLNS 717
V+ A+L ++E + ++++ W+ C D+ + + +L L++
Sbjct: 804 VNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 849
>MGI|MGI:95817 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95817
GO:GO:0005634 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0043204 GO:GO:0035235 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 EMBL:AC160123 GO:GO:0031960 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0032983 CTD:2900
KO:K05204 OMA:NRAPERL EMBL:AK032029 EMBL:AC122449 EMBL:AC136903
EMBL:AC140387 IPI:IPI00273856 RefSeq:NP_780690.2 UniGene:Mm.370291
ProteinModelPortal:Q8BMF5 SMR:Q8BMF5 STRING:Q8BMF5
PhosphoSite:Q8BMF5 PRIDE:Q8BMF5 Ensembl:ENSMUST00000034515
Ensembl:ENSMUST00000114865 GeneID:110637 KEGG:mmu:110637
InParanoid:Q8BMF5 OrthoDB:EOG402WRF NextBio:364375 Bgee:Q8BMF5
CleanEx:MM_GRIK4 Genevestigator:Q8BMF5
GermOnline:ENSMUSG00000032017 Uniprot:Q8BMF5
Length = 956
Score = 123 (48.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 44/195 (22%), Positives = 82/195 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ K + + L + V YG P+ ++G++ +V ++ + D V +TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S++ + ++ + FL P + +W+ +
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 494 VLEHRVNEDFRGP----AGQ--------QVGTSFWFSFSTMVFSQRERVISNLA---RIV 538
++ ++ P G+ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 539 VIVWCFVVLILTQSY 553
VW LI+ SY
Sbjct: 622 SGVWWAFTLIIISSY 636
Score = 102 (41.0 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 46/196 (23%), Positives = 81/196 (41%)
Query: 115 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+T I+H S+ I KA E+G+++ +I T+ +L R S++D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 175 GPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRALAEAVEKAGITSF 233
+ F +++ QEN V + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFSQSLNQSW-QENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQ- 326
Query: 234 GFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIIN- 291
+ + I Q+G L+ L +GLTG F GQ + A +I+
Sbjct: 327 -----EIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQF 381
Query: 292 VNNGARGVGFWTPEKG 307
NG + +G W +G
Sbjct: 382 TRNGFQQIGQWHVAEG 397
Score = 61 (26.5 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 22/101 (21%), Positives = 43/101 (42%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
T G+G P+ S + AIL + E ++++ ++ W++ CP ++ LG+
Sbjct: 746 TKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGME 803
Query: 717 SFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVLKNSESSFLS 757
+ M F+ W L++SE+S +S
Sbjct: 804 NIGGIFVVLICGLIVAIFMAMLEFL---WT-LRHSEASEVS 840
>WB|WBGene00001614 [details] [associations]
symbol:glr-3 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HSSP:P19491 EMBL:Z75545 PIR:T23570 RefSeq:NP_492017.3
UniGene:Cel.19345 ProteinModelPortal:Q21415 SMR:Q21415
EnsemblMetazoa:K10D3.1 GeneID:172449 KEGG:cel:CELE_K10D3.1
UCSC:K10D3.1 CTD:172449 WormBase:K10D3.1 InParanoid:Q21415
OMA:RIVINIP NextBio:875561 ArrayExpress:Q21415 Uniprot:Q21415
Length = 836
Score = 185 (70.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 374 SVTGYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGD 430
S GYC+D+ + L + V YG + S+G ++ +V ++ G+ D V
Sbjct: 421 SYEGYCIDLLHKIANILKFTYTIQKVRDNAYGSKE--SNGKWSGMVGELQRGDADLAVAS 478
Query: 431 ITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNA-WV-FLQPLTWDLWVTXXXXXXXX 488
+TI + RS +DFT+PY G+S++ K + R++ W F+ PL+ +W+
Sbjct: 479 LTISYGRSEVIDFTVPYMHLGISIL--FKKPRIRDSDWFKFMDPLSTQVWIMTFASYFVV 536
Query: 489 XXXXWVL------EHRVNEDFRG---PAGQQVG--TSFWFSFSTMVFSQRERVISNLA-- 535
W++ E ++ G P Q SFWF+ +++ Q + A
Sbjct: 537 SVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLM-QQGSELCPRAAST 595
Query: 536 RIVVIVWCFVVLILTQSY 553
R++ +W F LIL SY
Sbjct: 596 RLLTGIWWFFALILISSY 613
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 43/192 (22%), Positives = 84/192 (43%)
Query: 6 IIQ-LGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPI 64
I+Q + + + VP +S + P+ S LN S A + A IK W++ V +
Sbjct: 101 IVQSIADNTNVPCVSLHLSPPTRPSTH----LHPHLNAKSLA--VAAFIKREKWKDVVVV 154
Query: 65 YVDNQYGEEMIPSLTDALQA--IDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILH 122
+ + +E++ +TD + A D + S + L D EL + R I+
Sbjct: 155 FEEP---DELL-EITDMITAGHFDPD-SFSSQLVRLKHGDDYGNELKHIKNKLDRYRIVI 209
Query: 123 MLPSLGSRIF-EKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGV-----IGVGP 176
+P + F E+A + + +++ D +L+ T++ IDS++G+ G
Sbjct: 210 NIPLQKALHFLEQAANMSMCGVLYHYVVMD--MDLV-TVD---IDSIRGIEDCNITSFGV 263
Query: 177 HVPKTKALENFR 188
H ++ +E+ R
Sbjct: 264 HDVNSEYIEDIR 275
>UNIPROTKB|F1PEI5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 OMA:CSFYTVG
EMBL:AAEX03016767 EMBL:AAEX03016766 Ensembl:ENSCAFT00000015920
GeneTree:ENSGT00610000087353 Uniprot:F1PEI5
Length = 922
Score = 138 (53.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 52/219 (23%), Positives = 84/219 (38%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAV 427
+P G+ +DV A+ L + P YG P G++N LV ++ D
Sbjct: 378 KPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIG 435
Query: 428 VGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+ +TI +R N VDFT Y + V +++ + K + + L P LW
Sbjct: 436 ISALTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLL 494
Query: 488 XXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L +N R G T S WF + + V E + LA R+++ W
Sbjct: 495 VGLLVYLLNW-LNPP-RLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAW 552
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
LI+ SY I ++ L K+ D
Sbjct: 553 WLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTD 591
Score = 100 (40.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 68/294 (23%), Positives = 115/294 (39%)
Query: 29 SIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDAL--QAID 86
S+R P + LND I ++ + W++ + I+ D++Y I D + Q +D
Sbjct: 60 SVRPPVY----LND-----VILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMD 109
Query: 87 TRVP-YRSVISPLATD--DQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNK 143
+ + I+ + T D + E + R IL M P+ + E L+
Sbjct: 110 VALQKVENNINKMITTLFDTLRIEELNRYRDTLRRAILVMNPATAKSFITEVVETNLVAF 169
Query: 144 GCVWIMTDGMTNLL--RTLEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPS 201
C WI+ + N + + L I + + P VP+ + FR + + +P
Sbjct: 170 DCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFP-VPQNISQRCFRGNHRISSTLCDPK 228
Query: 202 IVDVE-LNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLL 260
+ + I L YD LA A K ++S + + + Q G +L
Sbjct: 229 DPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSML 285
Query: 261 QALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNG---ARGV---GFWTPEKG 307
+ + GLTG+ F + G + FEI+ N G RGV G W P G
Sbjct: 286 ETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 339
>RGD|68368 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA;ISO] [GO:0010975 "regulation of neuron projection
development" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA;ISO;IPI]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO]
[GO:0043197 "dendritic spine" evidence=IEA;ISO] [GO:0043523
"regulation of neuron apoptotic process" evidence=IEA;ISO]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA;ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA;ISO]
[GO:0060134 "prepulse inhibition" evidence=IEA;ISO] [GO:0097110
"scaffold protein binding" evidence=IEA;ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68368 GO:GO:0014069 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895 KO:K05207
OrthoDB:EOG4SBDX4 OMA:CSFYTVG EMBL:Z17239 EMBL:U08256
IPI:IPI00206854 PIR:S28858 RefSeq:NP_077355.1 RefSeq:XP_003749821.1
UniGene:Rn.10046 PDB:2V3T PDB:2V3U PDBsum:2V3T PDBsum:2V3U
ProteinModelPortal:Q63226 SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054
STRING:Q63226 PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304
GeneID:79220 KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 138 (53.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 52/219 (23%), Positives = 84/219 (38%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAV 427
+P G+ +DV A+ L + P YG P G++N LV ++ D
Sbjct: 463 KPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIG 520
Query: 428 VGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+ +TI +R N VDFT Y + V +++ + K + + L P LW
Sbjct: 521 ISALTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLL 579
Query: 488 XXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L +N R G T S WF + + V E + LA R+++ W
Sbjct: 580 VGLLVYLLNW-LNPP-RLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAW 637
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
LI+ SY I ++ L K+ D
Sbjct: 638 WLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTD 676
Score = 100 (40.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 63/274 (22%), Positives = 107/274 (39%)
Query: 49 ITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDAL--QAIDTRVP-YRSVISPLATD--DQ 103
I ++ + W++ + I+ D++Y I D + Q +D + + I+ + T D
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDT 214
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLL--RTLE 161
+ E + R IL M P+ + E L+ C WI+ + N + + L
Sbjct: 215 MRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELV 274
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRA 220
I + + P VP+ + FR + + +P + + I L YD
Sbjct: 275 RRSIGRLTIIRQTFP-VPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLL 333
Query: 221 LAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD- 279
LA A K ++S + + + Q G +L+ + GLTGD F +
Sbjct: 334 LANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVNGLTGDLEFGEN 390
Query: 280 GQLQSSAFEIINVNNG---ARGV---GFWTPEKG 307
G + FEI+ N G RGV G W P G
Sbjct: 391 GGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>UNIPROTKB|Q63226 [details] [associations]
symbol:Grid2 "Glutamate receptor ionotropic, delta-2"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:68368 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0060079 GO:GO:0060134 GO:GO:0035249 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:Z17239 EMBL:U08256 IPI:IPI00206854 PIR:S28858
RefSeq:NP_077355.1 RefSeq:XP_003749821.1 UniGene:Rn.10046 PDB:2V3T
PDB:2V3U PDBsum:2V3T PDBsum:2V3U ProteinModelPortal:Q63226
SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054 STRING:Q63226
PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304 GeneID:79220
KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 138 (53.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 52/219 (23%), Positives = 84/219 (38%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAV 427
+P G+ +DV A+ L + P YG P G++N LV ++ D
Sbjct: 463 KPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIG 520
Query: 428 VGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+ +TI +R N VDFT Y + V +++ + K + + L P LW
Sbjct: 521 ISALTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLL 579
Query: 488 XXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L +N R G T S WF + + V E + LA R+++ W
Sbjct: 580 VGLLVYLLNW-LNPP-RLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAW 637
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
LI+ SY I ++ L K+ D
Sbjct: 638 WLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTD 676
Score = 100 (40.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 63/274 (22%), Positives = 107/274 (39%)
Query: 49 ITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDAL--QAIDTRVP-YRSVISPLATD--DQ 103
I ++ + W++ + I+ D++Y I D + Q +D + + I+ + T D
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDT 214
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLL--RTLE 161
+ E + R IL M P+ + E L+ C WI+ + N + + L
Sbjct: 215 MRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELV 274
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRA 220
I + + P VP+ + FR + + +P + + I L YD
Sbjct: 275 RRSIGRLTIIRQTFP-VPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLL 333
Query: 221 LAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD- 279
LA A K ++S + + + Q G +L+ + GLTGD F +
Sbjct: 334 LANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVNGLTGDLEFGEN 390
Query: 280 GQLQSSAFEIINVNNG---ARGV---GFWTPEKG 307
G + FEI+ N G RGV G W P G
Sbjct: 391 GGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>UNIPROTKB|F1NKF1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00603883
ProteinModelPortal:F1NKF1 Ensembl:ENSGALT00000038841
ArrayExpress:F1NKF1 Uniprot:F1NKF1
Length = 883
Score = 156 (60.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 61/253 (24%), Positives = 103/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 444 GYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 562
Query: 494 VLE-------HRVN-EDFR----GPAGQQVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + G S WFS F Q+ IS +L+ R
Sbjct: 563 LVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 620
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 621 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 677
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 678 EF-FRRSKIAVFD 689
Score = 80 (33.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 59/272 (21%), Positives = 116/272 (42%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ W++ I ++ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYSSWQKYAKI-LNTSLGLSTLQAVLDS--AAEKKWQVTAINVGNINNDRKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM-----TDGMTNLL 157
+ L++ L + R IL + I ++ IG KG +I+ TDG + +
Sbjct: 191 TYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLSKI 250
Query: 158 RTLEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDA 217
+ + + Q V P V K F RW +E P + L YDA
Sbjct: 251 Q-FGGANVSGFQIVDYDDPLVSK------FIQRWSTLEEKEYPGAHTSTIKYTSALTYDA 303
Query: 218 TRALAEAVEKAGITSFGFDKTNVSR--NATDLEAFGISQ--NGPKLLQALSSTRFKGLTG 273
+ + EA + + +SR NA D A +G ++ +AL + +GLTG
Sbjct: 304 VQVMTEAFR-----NLRKQRIEISRRGNAGDCLANPAVPWGHGVEIERALKQVQVEGLTG 358
Query: 274 DYIF-VDGQLQSSAFEIINVNN-GARGVGFWT 303
+ F +G+ + ++ + + G R +G+W+
Sbjct: 359 NIKFDQNGKRINFTINVMELKSTGPRKIGYWS 390
>UNIPROTKB|F8WEZ8 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0051402 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 EMBL:AL109919
EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 HGNC:HGNC:4580
IPI:IPI01012035 ProteinModelPortal:F8WEZ8 SMR:F8WEZ8
Ensembl:ENST00000369134 ArrayExpress:F8WEZ8 Bgee:F8WEZ8
Uniprot:F8WEZ8
Length = 859
Score = 144 (55.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 46/192 (23%), Positives = 78/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 412 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 470
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 471 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 530
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 531 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 590
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 591 WWFFTLIIISSY 602
Score = 92 (37.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 105 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 161
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 162 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 218
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 219 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 272
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 273 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 330
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 331 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 361
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 562 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 621
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 622 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 678
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 679 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 735
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 736 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 770
>UNIPROTKB|Q13002 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IMP] [GO:0050804 "regulation
of synaptic transmission" evidence=IDA] [GO:0050806 "positive
regulation of synaptic transmission" evidence=IMP] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=NAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0005887 GO:GO:0051967 GO:GO:0007268 EMBL:CH471051
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 DrugBank:DB00142 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
Orphanet:88616 GO:GO:0050806 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:U16126
EMBL:AJ252246 EMBL:AJ301608 EMBL:AJ301609 EMBL:AJ301610
EMBL:HM149335 EMBL:HM149336 EMBL:HM149337 EMBL:HM149338
EMBL:HM149339 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529
EMBL:AP002530 IPI:IPI00011396 IPI:IPI00396613 IPI:IPI00642591
IPI:IPI00746275 IPI:IPI00815931 PIR:A54260 RefSeq:NP_001159719.1
RefSeq:NP_068775.1 RefSeq:NP_786944.1 UniGene:Hs.98262 PDB:3QXM
PDBsum:3QXM ProteinModelPortal:Q13002 SMR:Q13002 IntAct:Q13002
STRING:Q13002 PhosphoSite:Q13002 DMDM:2492627 PaxDb:Q13002
PRIDE:Q13002 DNASU:2898 Ensembl:ENST00000318991
Ensembl:ENST00000369137 Ensembl:ENST00000369138
Ensembl:ENST00000413795 Ensembl:ENST00000421544 GeneID:2898
KEGG:hsa:2898 UCSC:uc003pqn.3 UCSC:uc003pqo.4 UCSC:uc010kcw.3
CTD:2898 GeneCards:GC06P101846 H-InvDB:HIX0006094 HGNC:HGNC:4580
HPA:CAB022463 HPA:HPA014395 HPA:HPA014623 MIM:138244 MIM:611092
neXtProt:NX_Q13002 PharmGKB:PA164741600 InParanoid:Q13002 KO:K05202
OMA:VNGQWNG OrthoDB:EOG41C6VH PhylomeDB:Q13002 BindingDB:Q13002
ChEMBL:CHEMBL3683 GenomeRNAi:2898 NextBio:11469 ArrayExpress:Q13002
Bgee:Q13002 CleanEx:HS_GRIK2 Genevestigator:Q13002
GermOnline:ENSG00000164418 Uniprot:Q13002
Length = 908
Score = 144 (55.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 46/192 (23%), Positives = 78/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 519
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 580 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 639
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 640 WWFFTLIIISSY 651
Score = 92 (37.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 210
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 211 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 268 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 321
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 322 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 379
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 380 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 727
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 728 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 819
>UNIPROTKB|Q38PU3 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9541 "Macaca fascicularis" [GO:0030424 "axon" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0030424 GO:GO:0043197 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159934
HSSP:P22756 ProteinModelPortal:Q38PU3 SMR:Q38PU3 Uniprot:Q38PU3
Length = 908
Score = 144 (55.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 46/192 (23%), Positives = 78/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 519
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX--------- 484
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 579
Query: 485 -XXXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 580 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKALSTRIVGGI 639
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 640 WWFFTLIIISSY 651
Score = 92 (37.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 210
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 211 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 268 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 321
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 322 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 379
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 380 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 611 SFWFGVGALMRQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 727
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 728 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 819
>ZFIN|ZDB-GENE-020125-3 [details] [associations]
symbol:gria2a "glutamate receptor, ionotropic, AMPA
2a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05198 EMBL:AF525743
IPI:IPI00486705 RefSeq:NP_571969.1 UniGene:Dr.107958
ProteinModelPortal:Q71E63 SMR:Q71E63 PRIDE:Q71E63 GeneID:170450
KEGG:dre:170450 CTD:170450 InParanoid:Q71E63 NextBio:20797091
ArrayExpress:Q71E63 Bgee:Q71E63 Uniprot:Q71E63
Length = 875
Score = 158 (60.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 57/250 (22%), Positives = 99/250 (39%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D V +TI
Sbjct: 437 GYCVDLAAEIAKHCGFKYQLRIVADGKYGARDAETK-IWNGMVGELVYGKADIAVAPLTI 495
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 555
Query: 494 VLEHRV-----NEDFR-GPAGQQVGT-------SFWFSFSTMVFSQRERVISNLA-RIVV 539
++ E+F G G T S WFS + + +L+ RIV
Sbjct: 556 LVSRFSPYEWHTEEFEDGQLGPSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVG 615
Query: 540 IVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLG 599
VW F LI+ SY I + L K+ + + Y G+ G K+
Sbjct: 616 GVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDAGSTKEF- 671
Query: 600 FDERKLVVYN 609
F K+ +++
Sbjct: 672 FRRSKIALFD 681
Score = 77 (32.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 56/266 (21%), Positives = 108/266 (40%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
G + ++++ + W + +Y D+ G + ++ D A + + ++ + L + D+
Sbjct: 129 GPLISLVEYYKWEKFAYLY-DSDRGLSTLQAVLDT--AAERKWQVTAINVGNLKDEWKDE 185
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL-LRTL 160
+ L++ L R IL I E+ IG KG +I+ + G + L +
Sbjct: 186 AYRSLFQDLENKNERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANFGFVDGDLSKI 245
Query: 161 E--PSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + + Q V P V K F RW+ +E P D + L YDA
Sbjct: 246 QYGGANVSGFQIVDFDDPLVAK------FDQRWEALEEKEYPG-ADSRIRYTSALTYDAV 298
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFV 278
+ + EA + + + A +Q G ++ +AL R GLTG+ F
Sbjct: 299 QVMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQ-GVEIERALKQVRVDGLTGNIQFD 357
Query: 279 D-GQLQSSAFEIINV-NNGARGVGFW 302
G+ + ++ + N+G +G+W
Sbjct: 358 QYGRRVNYTVNVMELKNSGPVKIGYW 383
>MGI|MGI:95813 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=IDA] [GO:0010975 "regulation
of neuron projection development" evidence=IMP] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=ISO;IPI] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IMP] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0043523 "regulation of neuron apoptotic
process" evidence=IGI;IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=ISO;IDA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] [GO:0060134 "prepulse inhibition" evidence=IMP]
[GO:0097110 "scaffold protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95813
GO:GO:0014069 GO:GO:0034613 GO:GO:0030054 GO:GO:0045211
GO:GO:0043197 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:D13266 EMBL:BC139823 IPI:IPI00123534 PIR:PN0156
RefSeq:NP_032193.1 UniGene:Mm.439651 UniGene:Mm.447390
ProteinModelPortal:Q61625 SMR:Q61625 IntAct:Q61625 MINT:MINT-126960
STRING:Q61625 TCDB:1.A.10.1.8 PhosphoSite:Q61625 PaxDb:Q61625
PRIDE:Q61625 Ensembl:ENSMUST00000095852 GeneID:14804 KEGG:mmu:14804
UCSC:uc009cdz.1 InParanoid:A4QPG1 BindingDB:Q61625 ChiTaRS:GRID2
NextBio:286973 Bgee:Q61625 CleanEx:MM_GRID2 Genevestigator:Q61625
GermOnline:ENSMUSG00000071424 Uniprot:Q61625
Length = 1007
Score = 138 (53.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 52/219 (23%), Positives = 84/219 (38%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAV 427
+P G+ +DV A+ L + P YG P G++N LV ++ D
Sbjct: 463 KPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIG 520
Query: 428 VGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+ +TI +R N VDFT Y + V +++ + K + + L P LW
Sbjct: 521 ISALTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLL 579
Query: 488 XXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L +N R G T S WF + + V E + LA R+++ W
Sbjct: 580 VGLLVYLLNW-LNPP-RLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAW 637
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
LI+ SY I ++ L K+ D
Sbjct: 638 WLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTD 676
Score = 99 (39.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 63/274 (22%), Positives = 107/274 (39%)
Query: 49 ITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDAL--QAIDTRVP-YRSVISPLATD--DQ 103
I ++ + W++ + I+ D++Y I D + Q +D + + I+ + T D
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDT 214
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLL--RTLE 161
+ E + R IL M P+ + E L+ C WI+ + N + + L
Sbjct: 215 MRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELV 274
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRA 220
I + + P VP+ + FR + + +P + + I L YD
Sbjct: 275 RRSIGRLTIIRQTFP-VPQNISQRCFRGNHRISSSLCDPKDPFAQNMEISNLYIYDTVLL 333
Query: 221 LAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD- 279
LA A K ++S + + + Q G +L+ + GLTGD F +
Sbjct: 334 LANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVNGLTGDLEFGEN 390
Query: 280 GQLQSSAFEIINVNNG---ARGV---GFWTPEKG 307
G + FEI+ N G RGV G W P G
Sbjct: 391 GGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>MGI|MGI:95814 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO;IC] [GO:0014054 "positive regulation of
gamma-aminobutyric acid secretion" evidence=IMP] [GO:0015277
"kainate selective glutamate receptor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=IMP] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=ISO] [GO:0032230
"positive regulation of synaptic transmission, GABAergic"
evidence=ISO;IMP] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IPI] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IGI;IMP] [GO:0042391
"regulation of membrane potential" evidence=IDA;IMP] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=ISO;TAS] [GO:0048266 "behavioral
response to pain" evidence=IMP] [GO:0051899 "membrane
depolarization" evidence=IMP] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=ISO;IGI] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IGI;IMP] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95814 GO:GO:0051967
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:X66118
EMBL:U31444 IPI:IPI00122550 PIR:A41053 UniGene:Mm.5134
ProteinModelPortal:Q60934 SMR:Q60934 STRING:Q60934
PhosphoSite:Q60934 PRIDE:Q60934 UCSC:uc007zuw.2 CleanEx:MM_GRIK1
Genevestigator:Q60934 Uniprot:Q60934
Length = 836
Score = 152 (58.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 462 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 521
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 581
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 582 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 641
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 642 FFTLIIISSY 651
Score = 82 (33.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 64/311 (20%), Positives = 123/311 (39%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + R ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN-RDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 233
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 234 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 290
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 291 -SSIIE----KWSMERLQAPPR-PETGL-LDGVMTTEAA-LMYDAVYMVAIASHRASQLT 342
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINVNN-GA 296
VS + + GP+ + + R+ GLTG F DG + +II++ G
Sbjct: 343 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGT 400
Query: 297 RGVGFWTPEKG 307
+G W G
Sbjct: 401 EKIGIWNSNSG 411
Score = 40 (19.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
Score = 38 (18.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLT 272
G+T F+KT+ R DL+ + + G + + +S +T
Sbjct: 371 GLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMT 415
>UNIPROTKB|F1P7K5 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005767 Uniprot:F1P7K5
Length = 859
Score = 144 (55.7 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 46/192 (23%), Positives = 78/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 412 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 470
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 471 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 530
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 531 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 590
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 591 WWFFTLIIISSY 602
Score = 90 (36.7 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 105 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 161
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 162 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 218
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 219 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 272
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 273 LMYDAVHVVSVGVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 330
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 331 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 361
Score = 88 (36.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 562 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 621
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 622 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 678
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 679 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 735
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 736 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 770
>RGD|2734 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=TAS] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISO]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=TAS] [GO:0042734 "presynaptic membrane" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2734 GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 115 (45.5 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 43/195 (22%), Positives = 81/195 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ K + + L + V YG P+ ++G++ +V ++ + D V +TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S++ + ++ + L P + +W+ +
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 494 VLEHRVNEDFRGP----AGQ--------QVGTSFWFSFSTMVFSQRERVISNLA---RIV 538
++ ++ P G+ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 539 VIVWCFVVLILTQSY 553
VW LI+ SY
Sbjct: 622 SGVWWAFTLIIISSY 636
Score = 106 (42.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 47/196 (23%), Positives = 81/196 (41%)
Query: 115 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+T I+H S+ I KA E+G+++ +I T+ +L R S++D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 175 GPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRALAEAVEKAGITSF 233
+ F +++ QEN V + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFSQSLNQSW-QENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQ- 326
Query: 234 GFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIIN- 291
+ + I Q+G L+ L +GLTG F GQ + A +I+
Sbjct: 327 -----EIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQF 381
Query: 292 VNNGARGVGFWTPEKG 307
NG R +G W +G
Sbjct: 382 TRNGFRQIGQWHVAEG 397
Score = 61 (26.5 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 22/101 (21%), Positives = 43/101 (42%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
T G+G P+ S + AIL + E ++++ ++ W++ CP ++ LG+
Sbjct: 746 TKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGME 803
Query: 717 SFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVLKNSESSFLS 757
+ M F+ W L++SE+S +S
Sbjct: 804 NIGGIFVVLICGLIVAIFMAMLEFL---WT-LRHSEASEVS 840
>UNIPROTKB|Q01812 [details] [associations]
symbol:Grik4 "Glutamate receptor ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2734
GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 115 (45.5 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 43/195 (22%), Positives = 81/195 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ K + + L + V YG P+ ++G++ +V ++ + D V +TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S++ + ++ + L P + +W+ +
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 494 VLEHRVNEDFRGP----AGQ--------QVGTSFWFSFSTMVFSQRERVISNLA---RIV 538
++ ++ P G+ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 539 VIVWCFVVLILTQSY 553
VW LI+ SY
Sbjct: 622 SGVWWAFTLIIISSY 636
Score = 106 (42.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 47/196 (23%), Positives = 81/196 (41%)
Query: 115 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+T I+H S+ I KA E+G+++ +I T+ +L R S++D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 175 GPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRALAEAVEKAGITSF 233
+ F +++ QEN V + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFSQSLNQSW-QENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQ- 326
Query: 234 GFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIIN- 291
+ + I Q+G L+ L +GLTG F GQ + A +I+
Sbjct: 327 -----EIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQF 381
Query: 292 VNNGARGVGFWTPEKG 307
NG R +G W +G
Sbjct: 382 TRNGFRQIGQWHVAEG 397
Score = 61 (26.5 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 22/101 (21%), Positives = 43/101 (42%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
T G+G P+ S + AIL + E ++++ ++ W++ CP ++ LG+
Sbjct: 746 TKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGME 803
Query: 717 SFWXXXXXXXXXXXXXXXXXMAVFIHQHWNVLKNSESSFLS 757
+ M F+ W L++SE+S +S
Sbjct: 804 NIGGIFVVLICGLIVAIFMAMLEFL---WT-LRHSEASEVS 840
>FB|FBgn0264000 [details] [associations]
symbol:GluRIB "Glutamate receptor IB" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0006812 "cation
transport" evidence=ISS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 InterPro:IPR001828 OrthoDB:EOG4WM38M
GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 HSSP:P19491
FlyBase:FBgn0264000 EMBL:AJ251886 EMBL:AJ251887 SMR:Q9TVG7
STRING:Q9TVG7 InParanoid:Q9TVG7 Uniprot:Q9TVG7
Length = 1095
Score = 127 (49.8 bits), Expect = 3.5e-10, Sum P(4) = 3.5e-10
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC D+ + +EL V YG S+ G ++ +V ++ E D + +TI
Sbjct: 530 GYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMTI 589
Query: 434 VFNRSNYVDFTLPYTESGVSMIV--PIKDSKKRNAWVFLQPLTWDLWVT 480
R +DF+ P+ G+S+++ P+K + + F+ PL+ ++WV+
Sbjct: 590 TAERERVIDFSKPFMSLGISIMIKKPVKQTP--GVFSFMNPLSQEIWVS 636
Score = 88 (36.0 bits), Expect = 3.5e-10, Sum P(4) = 3.5e-10
Identities = 52/220 (23%), Positives = 82/220 (37%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA---RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXX 567
V SFWFS + F Q+ +S + RI W F LIL SY
Sbjct: 739 VWNSFWFSLAA--FMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMV 796
Query: 568 XXITDVKMLIKRGDNVGYQKGSFVLGIL------KQLGFDERKLVVYNSPEDCH-ELFQK 620
I + L + + V Y G+ + G Q+G + NS + + +
Sbjct: 797 TPINSPEDLAMQTE-VQY--GTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853
Query: 621 G--SVNG--GIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSK 676
G V G A E P + + + + T GFG PL S L ++
Sbjct: 854 GIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINL 913
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSCP---DASTVVSSRSL 713
A+L + E ++ ++ + W+ + + C D T S SL
Sbjct: 914 AVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHSELSL 953
Score = 59 (25.8 bits), Expect = 3.5e-10, Sum P(4) = 3.5e-10
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIIN--VNNGARGVGFWTPEKG 307
++G K+ + L +GLTGD F D G+ + ++ VN+ V W + G
Sbjct: 421 EHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAG 477
Score = 52 (23.4 bits), Expect = 3.5e-10, Sum P(4) = 3.5e-10
Identities = 38/186 (20%), Positives = 76/186 (40%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV--ISPLATDDQIE 105
AI I+ +GWR+ + +Y D+ G + + L+ + V IS ++ +
Sbjct: 160 AIIDTIQFYGWRKIIYLY-DSHDGLLRLQQIYQGLRPGNESFQVELVKRISNVSMAIEFL 218
Query: 106 KELYKLFTMQTRVFILHMLPSLGSRIF-EKANEIGLMNKGCVWIMTDGMTNLLRTLEPSV 164
L ++ + + +L + +I + ++ L + ++++ G+ R E +
Sbjct: 219 HTLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLS-GLVMDDRW-ESEI 276
Query: 165 IDSMQGVIGV-GPHVPKT--KALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRAL 221
I+ G I + G + T + + F WKR Q + ++ L YDA L
Sbjct: 277 IEF--GAINITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVL 334
Query: 222 AEAVEK 227
EA K
Sbjct: 335 VEAFNK 340
>UNIPROTKB|F1P7K6 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IEA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005766 Uniprot:F1P7K6
Length = 891
Score = 144 (55.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 46/192 (23%), Positives = 78/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 444 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 503 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 562
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 563 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 622
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 623 WWFFTLIIISSY 634
Score = 90 (36.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 137 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 193
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 194 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 250
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 251 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 304
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 305 LMYDAVHVVSVGVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 362
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 363 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 393
Score = 88 (36.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 594 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 653
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 654 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 710
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 711 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 767
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 768 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 802
>UNIPROTKB|F1MG21 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 CTD:2898 KO:K05202 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:DAAA02026130 EMBL:DAAA02026131
EMBL:DAAA02026132 EMBL:DAAA02026133 EMBL:DAAA02026134
EMBL:DAAA02026135 EMBL:DAAA02026136 EMBL:DAAA02026137
EMBL:DAAA02026138 EMBL:DAAA02026139 EMBL:DAAA02026140
EMBL:DAAA02026141 EMBL:DAAA02026142 IPI:IPI00706450
RefSeq:NP_001179992.1 UniGene:Bt.32868 ProteinModelPortal:F1MG21
Ensembl:ENSBTAT00000015563 GeneID:615226 KEGG:bta:615226
NextBio:20899512 Uniprot:F1MG21
Length = 908
Score = 144 (55.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 46/192 (23%), Positives = 78/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 519
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 580 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 639
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 640 WWFFTLIIISSY 651
Score = 90 (36.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 210
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 211 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 268 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 321
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 322 LMYDAVHVVSVGVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 379
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 380 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
Score = 88 (36.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 727
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 728 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 819
>MGI|MGI:95815 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2 (beta
2)" species:10090 "Mus musculus" [GO:0001662 "behavioral fear
response" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IGI;IMP] [GO:0008066
"glutamate receptor activity" evidence=ISO] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=ISO;IC] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP;IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP]
[GO:0042391 "regulation of membrane potential"
evidence=IGI;IMP;IDA] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043113
"receptor clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IGI]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;TAS] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0046328 "regulation of
JNK cascade" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=ISO;IMP]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IGI] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IGI;IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95815 Pfam:PF01094
GO:GO:0006886 GO:GO:0016020 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0043204
GO:GO:0051402 GO:GO:0045202 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249
GO:GO:0005622 GO:GO:0006874 GO:GO:0019228 GO:GO:0043113
GO:GO:0032839 GO:GO:0046328 GO:GO:0001662 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 eggNOG:NOG316680
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
OrthoDB:EOG41C6VH EMBL:X66117 EMBL:D10054 EMBL:U31443 EMBL:AC113305
IPI:IPI00131566 IPI:IPI00223171 PIR:A43954 PIR:S35792
UniGene:Mm.332838 ProteinModelPortal:P39087 SMR:P39087
IntAct:P39087 STRING:P39087 PhosphoSite:P39087 PaxDb:P39087
PRIDE:P39087 Ensembl:ENSMUST00000079751 Ensembl:ENSMUST00000105484
Ensembl:ENSMUST00000105485 Ensembl:ENSMUST00000105487
GeneTree:ENSGT00590000083056 InParanoid:P39087 Bgee:P39087
Genevestigator:P39087 GermOnline:ENSMUSG00000056073 Uniprot:P39087
Length = 908
Score = 141 (54.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 46/192 (23%), Positives = 77/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D +G +N +V ++ + D V + I
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DVNGQWNGMVRELIDHKADLAVAPLAI 519
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 580 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 639
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 640 WWFFTLIIISSY 651
Score = 93 (37.8 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 210
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 211 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 268 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 321
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 322 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 379
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 380 TNGLRTDFDLDVISLKEEGLEKIGTWDPSSG 410
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 727
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 728 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 819
>UNIPROTKB|F1NU20 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0019228 "regulation of action
potential in neuron" evidence=IEA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=IEA]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0051967
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0042734
GO:GO:0043524 GO:GO:0005622 GO:GO:0042391 GO:GO:0006874
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AADN02002208 EMBL:AADN02002209
EMBL:AADN02002210 EMBL:AADN02002211 EMBL:AADN02002212
EMBL:AADN02002213 EMBL:AADN02002214 EMBL:AADN02002215
EMBL:AADN02002216 EMBL:AADN02002217 EMBL:AADN02002218
EMBL:AADN02002219 EMBL:AADN02002220 EMBL:AADN02002221
EMBL:AADN02002222 IPI:IPI00573083 ProteinModelPortal:F1NU20
Ensembl:ENSGALT00000024893 Uniprot:F1NU20
Length = 877
Score = 144 (55.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 46/192 (23%), Positives = 79/192 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L ++ V YG + +SG +N +V ++ + D V + I
Sbjct: 430 GYCIDLLRELSTILGFSYEIRLVEDGKYGAQE-DASGQWNGMVRELIDHKADLAVAPLAI 488
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 489 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 548
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 549 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 608
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 609 WWFFTLIIISSY 620
Score = 89 (36.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 59/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 123 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 179
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 180 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 236
Query: 162 PSVIDSMQGVIGVGPHVPKTK--ALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 237 PY---RYSGVNMTGFRILNTENSQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 290
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 291 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 348
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G VG W P G
Sbjct: 349 SNGLRTDFDLDVISLKEEGLEKVGTWDPLSG 379
Score = 88 (36.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 580 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 639
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 640 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 696
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 697 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 753
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 754 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 788
>UNIPROTKB|F1LP48 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation
of synaptic transmission" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
IPI:IPI00324708 PRIDE:F1LP48 Ensembl:ENSRNOT00000000415
ArrayExpress:F1LP48 Uniprot:F1LP48
Length = 870
Score = 141 (54.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 46/192 (23%), Positives = 77/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D +G +N +V ++ + D V + I
Sbjct: 423 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DVNGQWNGMVRELIDHKADLAVAPLAI 481
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 482 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 541
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 542 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 601
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 602 WWFFTLIIISSY 613
Score = 92 (37.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 116 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 172
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 173 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 229
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 230 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 283
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 284 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 341
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 342 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 372
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 573 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 632
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 633 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 689
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 690 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 746
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 747 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 781
>RGD|2733 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA;ISO;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030424 "axon"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0032839
"dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;TAS] [GO:0035249
"synaptic transmission, glutamatergic" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043113 "receptor clustering" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0046328
"regulation of JNK cascade" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048172
"regulation of short-term neuronal synaptic plasticity" evidence=ISO]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=IMP]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708 PIR:S19098
RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T
PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT
PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G
PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT
PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3
PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR
PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX
PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I
PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT
PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260 SMR:P42260
DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260 PRIDE:P42260
GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260
BindingDB:P42260 ChEMBL:CHEMBL3607 EvolutionaryTrace:P42260
NextBio:610770 ArrayExpress:P42260 Genevestigator:P42260
GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 141 (54.7 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 46/192 (23%), Positives = 77/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D +G +N +V ++ + D V + I
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DVNGQWNGMVRELIDHKADLAVAPLAI 519
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 580 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 639
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 640 WWFFTLIIISSY 651
Score = 92 (37.4 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 210
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 211 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 268 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 321
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 322 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 379
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 380 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 727
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 728 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 819
>UNIPROTKB|P42260 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228
GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708
PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y
PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR
PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F
PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H
PDB:3QLT PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T
PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C
PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW
PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H
PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H
PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260
SMR:P42260 DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260
PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733
InParanoid:P42260 BindingDB:P42260 ChEMBL:CHEMBL3607
EvolutionaryTrace:P42260 NextBio:610770 ArrayExpress:P42260
Genevestigator:P42260 GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 141 (54.7 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 46/192 (23%), Positives = 77/192 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D +G +N +V ++ + D V + I
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DVNGQWNGMVRELIDHKADLAVAPLAI 519
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIV 541
W H N D + SFWF ++ E + L+ RIV +
Sbjct: 580 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 639
Query: 542 WCFVVLILTQSY 553
W F LI+ SY
Sbjct: 640 WWFFTLIIISSY 651
Score = 92 (37.4 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 210
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 211 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 268 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 321
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 322 LMYDAVHVVSVAVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 379
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 380 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFWF ++ E + L+ RIV +W F LI+ SY I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 573 VKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQK 620
L K+ G + + K S + K F R+ V+ S E E Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQR 727
Query: 621 GSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILN 680
V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 728 --VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 681 VTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 819
>FB|FBgn0038837 [details] [associations]
symbol:CG3822 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0015277 HSSP:P19491 OrthoDB:EOG4FQZ6P
EMBL:AY119103 ProteinModelPortal:Q8MS48 SMR:Q8MS48 PaxDb:Q8MS48
PRIDE:Q8MS48 FlyBase:FBgn0038837 InParanoid:Q8MS48
ArrayExpress:Q8MS48 Bgee:Q8MS48 Uniprot:Q8MS48
Length = 853
Score = 172 (65.6 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 49/191 (25%), Positives = 86/191 (45%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSS--SGSYNDLVYQVFLGEFDAVVGDITIV 434
GY VD+ + + L + VP G + +G +N ++ ++ D + D+TI
Sbjct: 446 GYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTIT 505
Query: 435 FNRSNYVDFTLPYTESGVSMIV--PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX 492
F R VDFT P+ GVS++ PIK N + FL PL+ D+W+
Sbjct: 506 FEREQAVDFTTPFMNLGVSILYRKPIKQPP--NLFSFLSPLSLDVWIYMATAYLGVSVLL 563
Query: 493 WVLEHRVNED---FRGPAGQQVGTSF------WFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L + + G++V + F WF+ +++ + + L+ R+V +W
Sbjct: 564 FILAKFTPYEWPAYTDAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIW 623
Query: 543 CFVVLILTQSY 553
F LI+ SY
Sbjct: 624 WFFTLIMISSY 634
Score = 59 (25.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 56/262 (21%), Positives = 102/262 (38%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 107
A I++ +GW+ IY +N G I L + L+A P+ + L+
Sbjct: 147 AYVDIVRHWGWKTFTIIYENND-G---IVRLQELLKA-HGMTPFPITVRQLSDSGDYRPL 201
Query: 108 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDS 167
L ++ +L + ++A +IG+M+ +++T + L T+ +D
Sbjct: 202 LKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTS-LD--LHTVN---LDE 255
Query: 168 MQ--GVIGVGPHVPKTKALENFRVRWK--RNFLQENPSIVDVELNIFGLLAYDATRALAE 223
+ G G + K + + +W L + ++ V L YDA A+
Sbjct: 256 FRYGGTNITGFRLINEKIVSDVVRQWSIDEKGLLRSANLTTVRSET--ALMYDAVHLFAK 313
Query: 224 AVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQ 283
A+ TS D +S + Q+G L+ + KGLT + I D Q
Sbjct: 314 ALHDLD-TSQQIDIHPIS-----CDGQSTWQHGFSLINYMKIVEMKGLT-NVIKFDHQGF 366
Query: 284 SSAF--EIINVNN-GARGVGFW 302
+ F +I+ + G R +G W
Sbjct: 367 RADFMLDIVELTPAGIRKIGTW 388
>UNIPROTKB|F1MR40 [details] [associations]
symbol:F1MR40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221
OMA:ARCGCPR EMBL:DAAA02047449 EMBL:DAAA02047450 EMBL:DAAA02047451
IPI:IPI00838975 Ensembl:ENSBTAT00000042550 Uniprot:F1MR40
Length = 993
Score = 183 (69.5 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 54/226 (23%), Positives = 100/226 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP + + + D E G+C+D+ K + Q + ++ V
Sbjct: 448 PISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVT 507
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ G +N ++ +VF D +G +TI RS VDF++P+ E+G+S++V +
Sbjct: 508 NGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVA-RS 566
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVLEHR----VNEDF---RGPAGQQ-- 510
+ + FL+P + +WV ++ E+ N + P G
Sbjct: 567 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFT 626
Query: 511 VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+G S W ++ +VF+ E ++I+V+VW F +I SY
Sbjct: 627 IGKSIWLLWA-LVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY 671
Score = 49 (22.3 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 110 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+L ++ ++ +L +F A E GL G VW M
Sbjct: 233 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 272
>UNIPROTKB|K7GSB6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 InterPro:IPR001828
GeneTree:ENSGT00590000083056 EMBL:AEMK01188348 EMBL:CU062538
EMBL:CU407189 EMBL:CU457396 EMBL:CU928568
Ensembl:ENSSSCT00000032833 Uniprot:K7GSB6
Length = 573
Score = 123 (48.4 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 412 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 470
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 471 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWM 516
Score = 90 (36.7 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 105 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 161
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 162 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 218
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 219 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 272
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 273 LMYDAVHVVSVGVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 330
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 331 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 361
Score = 58 (25.5 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 694 WFKKHSSCPDASTVVSSRSLGLNSFW 719
W+ H PD+ V ++ +L LNSFW
Sbjct: 540 WYNPHPCNPDSDVVENNFTL-LNSFW 564
>UNIPROTKB|F1RL86 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221
OMA:ARCGCPR EMBL:FP102301 Ensembl:ENSSSCT00000003474 Uniprot:F1RL86
Length = 1328
Score = 183 (69.5 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 54/226 (23%), Positives = 100/226 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP + + + D E G+C+D+ K + Q + ++ V
Sbjct: 450 PISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVT 509
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ G +N ++ +VF D +G +TI RS VDF++P+ E+G+S++V +
Sbjct: 510 NGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVA-RS 568
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVLEHR----VNEDF---RGPAGQQ-- 510
+ + FL+P + +WV ++ E+ N + P G
Sbjct: 569 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFT 628
Query: 511 VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+G S W ++ +VF+ E ++I+V+VW F +I SY
Sbjct: 629 IGKSIWLLWA-LVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY 673
Score = 49 (22.3 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 110 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+L ++ ++ +L +F A E GL G VW M
Sbjct: 235 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 274
Score = 49 (22.3 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 26/116 (22%), Positives = 45/116 (38%)
Query: 605 LVVYNSP--EDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPK-FKTAGFG 661
+V YN P E+ + G ++ I A + YM + C + K F T G+G
Sbjct: 733 MVRYNQPRVEEALTQLKAGKLDAFIYDAA-VLNYMARK-DEGCKLVTIGSGKVFATTGYG 790
Query: 662 FVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
S + A+L D+++ +E W C + V S L +++
Sbjct: 791 IALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS--GICHNDKIEVMSSKLDIDN 844
>UNIPROTKB|F1NY64 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00821646
Ensembl:ENSGALT00000015322 ArrayExpress:F1NY64 Uniprot:F1NY64
Length = 878
Score = 156 (60.0 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 61/253 (24%), Positives = 103/253 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D + +TI
Sbjct: 439 GYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 497
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 498 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 557
Query: 494 VLE-------HRVN-EDFR----GPAGQQVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED R + + G S WFS F Q+ IS +L+ R
Sbjct: 558 LVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 615
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 616 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTK 672
Query: 597 QLGFDERKLVVYN 609
+ F K+ V++
Sbjct: 673 EF-FRRSKIAVFD 684
Score = 75 (31.5 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 30/126 (23%), Positives = 55/126 (43%)
Query: 184 LENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSR- 242
+ F RW +E P + L YDA + + EA + + +SR
Sbjct: 265 VSKFIQRWSTLEEKEYPGAHTSTIKYTSALTYDAVQVMTEAFR-----NLRKQRIEISRR 319
Query: 243 -NATDLEAFGISQ--NGPKLLQALSSTRFKGLTGDYIF-VDGQLQSSAFEIINVNN-GAR 297
NA D A +G ++ +AL + +GLTG+ F +G+ + ++ + + G R
Sbjct: 320 GNAGDCLANPAVPWGHGVEIERALKQVQVEGLTGNIKFDQNGKRINFTINVMELKSTGPR 379
Query: 298 GVGFWT 303
+G+W+
Sbjct: 380 KIGYWS 385
>WB|WBGene00001613 [details] [associations]
symbol:glr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 EMBL:FO080148
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 KO:K05313
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 EMBL:AF318606
PIR:T15306 RefSeq:NP_001021113.1 RefSeq:NP_001021114.1
UniGene:Cel.19346 ProteinModelPortal:Q10914 SMR:Q10914
STRING:Q10914 PaxDb:Q10914 PRIDE:Q10914 EnsemblMetazoa:B0280.12b
GeneID:175999 KEGG:cel:CELE_B0280.12 UCSC:B0280.12b CTD:175999
WormBase:B0280.12a WormBase:B0280.12b InParanoid:Q10914 OMA:MTPPIES
NextBio:890672 Uniprot:Q10914
Length = 977
Score = 154 (59.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 74/335 (22%), Positives = 133/335 (39%)
Query: 245 TDLEAFGISQNGPKLLQALSS---TRFKG-LTGDYIF--VDGQLQSSAFEIINVNNGARG 298
T+ F ++G K+ +A+ T G LTG F V G+ + + EI+ + G
Sbjct: 382 TESRQFETFEHGKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVEIKPGVNS 441
Query: 299 VG-FWTPEKGXXXXXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIGVPVKKGF 357
+ W + DS+ KG +P+ +LR V V
Sbjct: 442 LNSIWERFQWAEGEGFLLGGERYVQEK---KKDSSQTRKGI-LPSKPWQLRFNV-VTVLV 496
Query: 358 SDFVNVTI----DPKTQEPTSVTGYCVDVFKAVIQELPYAVAYD-FVPYGQPDGS--SSG 410
FV + +P+ + GYC+D+ + + + YD F+ G GS + G
Sbjct: 497 KPFVMLKRRNPGEPELKGNDRFEGYCIDLLNLLAKNIT-GFEYDVFISDGNKYGSRQADG 555
Query: 411 SYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFL 470
S++ ++ + D V +TI R VDF+ P+ +G+S+++ + ++ N + F+
Sbjct: 556 SWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFM 615
Query: 471 QPLTWDLWVTXXXXXXXXXXX----XWVLEHRVNEDF-RGP---AGQ-QVGTSFWFSFST 521
+PL +W+ W + +F RG + + S WF+ +
Sbjct: 616 EPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAA 675
Query: 522 MVFSQRE---RVISNLARIVVIVWCFVVLILTQSY 553
+ + R +S RI W F LI+ SY
Sbjct: 676 FMQQGTDILPRAVSG--RIASSCWWFFTLIIVSSY 708
Score = 78 (32.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 657 TAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLN 716
T G+G + +PL ++ AIL ++E ++K++E+ W+ C D T S LN
Sbjct: 837 TLGYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKWWYDRGQC-DTGTSDGGTSSSLN 895
>UNIPROTKB|F1P6H3 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00540000070221 OMA:ARCGCPR
EMBL:AAEX03000823 Ensembl:ENSCAFT00000006426 Uniprot:F1P6H3
Length = 1126
Score = 183 (69.5 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 54/226 (23%), Positives = 100/226 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP + + + D E G+C+D+ K + Q + ++ V
Sbjct: 239 PISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVT 298
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ G +N ++ +VF D +G +TI RS VDF++P+ E+G+S++V +
Sbjct: 299 NGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVA-RS 357
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVLEHR----VNEDF---RGPAGQQ-- 510
+ + FL+P + +WV ++ E+ N + P G
Sbjct: 358 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFT 417
Query: 511 VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+G S W ++ +VF+ E ++I+V+VW F +I SY
Sbjct: 418 IGKSIWLLWA-LVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY 462
Score = 49 (22.3 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 110 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+L ++ ++ +L +F A E GL G VW M
Sbjct: 24 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 63
Score = 46 (21.3 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 22/93 (23%), Positives = 37/93 (39%)
Query: 605 LVVYNSP--EDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPK-FKTAGFG 661
+V YN P E+ + G ++ I A + YM + C + K F T G+G
Sbjct: 522 MVRYNQPRVEEALTQLKAGKLDAFIYDAA-VLNYMARK-DEGCKLVTIGSGKVFATTGYG 579
Query: 662 FVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 694
S + A+L D+++ +E W
Sbjct: 580 IALHKGSRWKRPIDLALLQFLGDDEIEMLERLW 612
>ZFIN|ZDB-GENE-020125-4 [details] [associations]
symbol:gria2b "glutamate receptor, ionotropic, AMPA
2b" species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-4 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HSSP:P19491 EMBL:AF361751 IPI:IPI00513119 UniGene:Dr.81161
ProteinModelPortal:Q90XP6 SMR:Q90XP6 InParanoid:Q90XP6
ArrayExpress:Q90XP6 Uniprot:Q90XP6
Length = 897
Score = 149 (57.5 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 56/250 (22%), Positives = 99/250 (39%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFV---PYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + V YG D + +N +V ++ G+ D V +TI
Sbjct: 441 GYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETK-IWNGMVGELVYGKADIAVAPLTI 499
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 500 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 559
Query: 494 VLE-------HRVN-EDFR---GPAGQQVG--TSFWFSFSTMVFSQRERVISNL-ARIVV 539
++ H ED + + + G S WFS + + +L RIV
Sbjct: 560 LVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLPGRIVG 619
Query: 540 IVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLG 599
VW F LI+ SY I + L K+ + + Y G+ G K+
Sbjct: 620 GVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF- 675
Query: 600 FDERKLVVYN 609
F K+ +++
Sbjct: 676 FRRSKIALFD 685
Score = 82 (33.9 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 30/122 (24%), Positives = 53/122 (43%)
Query: 184 LENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRN 243
+ F RW+ +E P D ++ L YDA + + EA + D + + N
Sbjct: 269 VSKFDQRWEALEEKEYPG-ADSKIRYTSALTYDAVQVMTEAFRY--LHKQRIDISRRANN 325
Query: 244 ATDLEAFGIS-QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVG 300
L + G ++ +AL R GLTG+ F G+ + ++ + +NGA +G
Sbjct: 326 GDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQFDQYGKRVNYTVHVMELKSNGAVKIG 385
Query: 301 FW 302
+W
Sbjct: 386 YW 387
>UNIPROTKB|F1RYR0 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:VNGQWNG GeneTree:ENSGT00590000083056
EMBL:AEMK01188348 EMBL:CU062538 EMBL:CU407189 EMBL:CU457396
EMBL:CU928568 Ensembl:ENSSSCT00000004819 Uniprot:F1RYR0
Length = 872
Score = 140 (54.3 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 44/193 (22%), Positives = 77/193 (39%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC+D+ + + L + V YG D ++G +N +V ++ + D V + I
Sbjct: 424 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQD-DANGQWNGMVRELIDHKADLAVAPLAI 482
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX-------- 485
+ R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 483 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 542
Query: 486 --XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISN--LARIVVI 540
W H N D + SFWF ++ + ++ RIV
Sbjct: 543 VIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQEGPELMPKALFLRIVGG 602
Query: 541 VWCFVVLILTQSY 553
+W F LI+ SY
Sbjct: 603 IWWFFTLIIISSY 615
Score = 90 (36.7 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 58/271 (21%), Positives = 105/271 (38%)
Query: 43 SSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDD 102
SS + AI +++ F W+ +Y D+ G + L A + R+ R + P T D
Sbjct: 117 SSLSRAILDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQL--PADTKD 173
Query: 103 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 174 A--KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 230
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRV--RWKRNFLQENPSIVDVELNIFGLLAYDATR 219
P GV G + T+ + + +W LQ P D L + G + DA
Sbjct: 231 PY---RYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPK-PDSGL-LDGFMTTDAA- 284
Query: 220 ALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF-- 277
+ +AV + F + VS + + G + + + ++GLTG F
Sbjct: 285 LMYDAVHVVSVGVQQFPQMTVS--SLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK 342
Query: 278 VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
+G ++I++ G +G W P G
Sbjct: 343 TNGLRTDFDLDVISLKEEGLEKIGTWDPASG 373
Score = 84 (34.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 48/218 (22%), Positives = 86/218 (39%)
Query: 514 SFWFSFSTMVFSQRERVISN--LARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXIT 571
SFWF ++ + ++ RIV +W F LI+ SY I
Sbjct: 574 SFWFGVGALMQQEGPELMPKALFLRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPID 633
Query: 572 DVKMLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSPEDCHELFQ 619
L K+ G + + K S + K F R+ V+ S E E Q
Sbjct: 634 SADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNE---EGIQ 690
Query: 620 KGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAIL 679
+ V A E ++ + + C+ I + G+G P+ SP ++ AIL
Sbjct: 691 R--VLTSDYAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAIL 747
Query: 680 NVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
+ E K+ +++ W++ + CP+ + +S +LG+ +
Sbjct: 748 QLQEEGKLHMMKEKWWRGNG-CPEEESKEAS-ALGVQN 783
>UNIPROTKB|Q5R4M0 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9601 "Pongo
abelii" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 EMBL:CR861226
UniGene:Pab.364 ProteinModelPortal:Q5R4M0 SMR:Q5R4M0 PRIDE:Q5R4M0
InParanoid:Q5R4M0 Uniprot:Q5R4M0
Length = 883
Score = 149 (57.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 57/252 (22%), Positives = 101/252 (40%)
Query: 377 GYCVDVFKAVIQELPY----AVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDIT 432
GYCVD+ + + + +A D YG D + +N +V ++ G+ D + +T
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIAGDG-KYGARDADTK-IWNGMVGELVYGKADIAIAPLT 501
Query: 433 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX 492
I R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 502 ITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLYPLAYEIWMCIVFAYIGVSVVL 561
Query: 493 WVLE-------HRVN-EDFRGPAGQQ------VGTSFWFSFSTMVFSQRERVISNLA-RI 537
+++ H ED R + + S WFS + + +L+ RI
Sbjct: 562 FLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRI 621
Query: 538 VVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQ 597
V VW F LI+ SY I + L K+ + + Y G+ G K+
Sbjct: 622 VGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGSTKE 678
Query: 598 LGFDERKLVVYN 609
F K+ V++
Sbjct: 679 F-FRRSKIAVFD 689
Score = 80 (33.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 54/267 (20%), Positives = 115/267 (43%)
Query: 47 GAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 103
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 104 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 159
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKI 250
Query: 160 -LEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDAT 218
+ + Q ++ + +K +E RW +E P + L Y A
Sbjct: 251 QFGGANVSGFQ-IVDYDDSLV-SKFIE----RWSTLEEKEYPGAHTTTIKYTSALTYYAV 304
Query: 219 RALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF- 277
+ + EA + + + A Q G ++ +AL + +GL+G+ F
Sbjct: 305 QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFD 363
Query: 278 VDGQLQSSAFEIINVN-NGARGVGFWT 303
+G+ + I+ + NG R +G+W+
Sbjct: 364 QNGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|E7EPZ0 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792601
ProteinModelPortal:E7EPZ0 SMR:E7EPZ0 Ensembl:ENST00000399909
ArrayExpress:E7EPZ0 Bgee:E7EPZ0 Uniprot:E7EPZ0
Length = 903
Score = 152 (58.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 521
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 581
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 582 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 641
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 642 FFTLIIISSY 651
Score = 77 (32.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 63/311 (20%), Positives = 123/311 (39%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + AI ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 233
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 234 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 290
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 291 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 342
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINVNN-GA 296
VS + + GP+ + + R+ GLTG F +G + +II++ G
Sbjct: 343 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGT 400
Query: 297 RGVGFWTPEKG 307
+G W G
Sbjct: 401 EKIGIWNSNSG 411
Score = 43 (20.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLT 272
G+T F+KTN R DL+ + + G + + +S +T
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMT 415
Score = 40 (19.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
>UNIPROTKB|O43424 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISS] [GO:0034613 "cellular protein localization"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISS] [GO:0060134 "prepulse inhibition"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
[GO:0097110 "scaffold protein binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0006810
GO:GO:0043197 GO:GO:0035235 GO:GO:0045202 GO:GO:0060079
GO:GO:0060134 GO:GO:0035249 DrugBank:DB00142 GO:GO:0030288
GO:GO:0030165 GO:GO:0043523 InterPro:IPR001828 GO:GO:0097110
GO:GO:0008328 GO:GO:0005234 GO:GO:0008066 GO:GO:0004970
eggNOG:NOG276334 HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895
KO:K05207 OrthoDB:EOG4SBDX4 EMBL:AF009014 EMBL:AB209318
EMBL:AC022317 EMBL:AC093596 EMBL:AC093733 EMBL:AC096769
EMBL:AC104077 EMBL:AC105315 EMBL:AC105452 EMBL:AC112695
EMBL:AC115111 EMBL:BC099652 EMBL:BC099653 IPI:IPI00747494
RefSeq:NP_001501.2 UniGene:Hs.480281 ProteinModelPortal:O43424
SMR:O43424 MINT:MINT-257823 STRING:O43424 PhosphoSite:O43424
PaxDb:O43424 PRIDE:O43424 Ensembl:ENST00000282020 GeneID:2895
KEGG:hsa:2895 UCSC:uc011cdt.2 GeneCards:GC04P093225
H-InvDB:HIX0031353 HGNC:HGNC:4576 MIM:602368 neXtProt:NX_O43424
PharmGKB:PA28971 InParanoid:O43424 OMA:CSFYTVG PhylomeDB:O43424
GenomeRNAi:2895 NextBio:11455 ArrayExpress:O43424 Bgee:O43424
CleanEx:HS_GRID2 Genevestigator:O43424 Uniprot:O43424
Length = 1007
Score = 134 (52.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 51/217 (23%), Positives = 83/217 (38%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAV 427
+P G+ +DV A+ L + P YG P G++N LV ++ D
Sbjct: 463 KPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIG 520
Query: 428 VGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+ +TI +R N VDFT Y + V +++ + K + + L P LW
Sbjct: 521 ISALTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLL 579
Query: 488 XXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L +N R G T S WF + + V E + LA R+++ W
Sbjct: 580 VGLLVYLLNW-LNPP-RLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAW 637
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKR 579
LI+ SY I ++ L K+
Sbjct: 638 WLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQ 674
Score = 95 (38.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 62/274 (22%), Positives = 107/274 (39%)
Query: 49 ITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDAL--QAIDTRVP-YRSVISPLATD--DQ 103
I ++ + W++ + I+ D++Y I D + Q +D + + I+ + T D
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDT 214
Query: 104 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLL--RTLE 161
+ E + R IL M P+ + E L+ C WI+ + N + + L
Sbjct: 215 MRIEELNRYRDTLRRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEINDVDVQELV 274
Query: 162 PSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVE-LNIFGLLAYDATRA 220
I + + P VP+ + FR + + +P + + I L YD
Sbjct: 275 RRSIGRLTIIRQTFP-VPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLL 333
Query: 221 LAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD- 279
LA A K ++S + + + Q G +L+ + GLTG+ F +
Sbjct: 334 LANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVSGLTGELEFGEN 390
Query: 280 GQLQSSAFEIINVNNG---ARGV---GFWTPEKG 307
G + FEI+ N G RGV G W P G
Sbjct: 391 GGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>UNIPROTKB|O15399 [details] [associations]
symbol:GRIN2D "Glutamate receptor ionotropic, NMDA 2D"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0051930 "regulation of
sensory perception of pain" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005886 GO:GO:0007268 GO:GO:0051930 GO:GO:0030054
GO:GO:0045211 GO:GO:0008344 GO:GO:0035235 GO:GO:0035249
DrugBank:DB00142 GO:GO:0030288 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0001964 DrugBank:DB01173 GO:GO:0016595 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0022843
EMBL:AC008403 GO:GO:0004972 OrthoDB:EOG42RD6M EMBL:U77783
EMBL:AC011527 IPI:IPI00006217 RefSeq:NP_000827.2 UniGene:Hs.445015
ProteinModelPortal:O15399 SMR:O15399 IntAct:O15399 MINT:MINT-130143
STRING:O15399 PhosphoSite:O15399 PaxDb:O15399 PRIDE:O15399
Ensembl:ENST00000263269 GeneID:2906 KEGG:hsa:2906 UCSC:uc002pjc.4
CTD:2906 GeneCards:GC19P048898 H-InvDB:HIX0040164 HGNC:HGNC:4588
HPA:HPA038269 MIM:602717 neXtProt:NX_O15399 PharmGKB:PA28982
HOGENOM:HOG000113803 HOVERGEN:HBG052637 InParanoid:O15399 KO:K05212
OMA:ARCGCPR PhylomeDB:O15399 BindingDB:O15399 ChEMBL:CHEMBL2591
GenomeRNAi:2906 NextBio:11507 Bgee:O15399 CleanEx:HS_GRIN2D
Genevestigator:O15399 GermOnline:ENSG00000105464 Uniprot:O15399
Length = 1336
Score = 178 (67.7 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 53/226 (23%), Positives = 99/226 (43%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP + + + D E G+C+D+ K + + ++ V
Sbjct: 450 PISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVT 509
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ G +N ++ +VF D +G +TI RS VDF++P+ E+G+S++V +
Sbjct: 510 NGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVA-RS 568
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVLEHR----VNEDF---RGPAGQQ-- 510
+ + FL+P + +WV ++ E+ N + P G
Sbjct: 569 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFT 628
Query: 511 VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+G S W ++ +VF+ E ++I+V+VW F +I SY
Sbjct: 629 IGKSIWLLWA-LVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY 673
Score = 50 (22.7 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 110 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+L ++ ++ +L +F A E GL G VW M
Sbjct: 235 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGSGYVWFM 274
Score = 49 (22.3 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 26/116 (22%), Positives = 45/116 (38%)
Query: 605 LVVYNSP--EDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPK-FKTAGFG 661
+V YN P E+ + G ++ I A + YM + C + K F T G+G
Sbjct: 733 MVRYNQPRVEEALTQLKAGKLDAFIYDAA-VLNYMARK-DEGCKLVTIGSGKVFATTGYG 790
Query: 662 FVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
S + A+L D+++ +E W C + V S L +++
Sbjct: 791 IALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS--GICHNDKIEVMSSKLDIDN 844
>MGI|MGI:95823 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, NMDA2D (epsilon
4)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016595 "glutamate binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051930 "regulation of sensory perception of
pain" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95823 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0045202
GO:GO:0035249 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0016595 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0022843 GO:GO:0004972
GeneTree:ENSGT00540000070221 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 OMA:ARCGCPR
EMBL:AB154245 EMBL:D12822 IPI:IPI00131279 PIR:S27224
RefSeq:NP_032198.2 UniGene:Mm.322594 ProteinModelPortal:Q03391
SMR:Q03391 IntAct:Q03391 STRING:Q03391 PhosphoSite:Q03391
PaxDb:Q03391 PRIDE:Q03391 Ensembl:ENSMUST00000002848 GeneID:14814
KEGG:mmu:14814 InParanoid:Q03391 BindingDB:Q03391 ChEMBL:CHEMBL2893
NextBio:287011 Bgee:Q03391 Genevestigator:Q03391
GermOnline:ENSMUSG00000002771 Uniprot:Q03391
Length = 1323
Score = 178 (67.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 53/226 (23%), Positives = 99/226 (43%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP + + + D E G+C+D+ K + + ++ V
Sbjct: 447 PISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVT 506
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ G +N ++ +VF D +G +TI RS VDF++P+ E+G+S++V +
Sbjct: 507 NGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVA-RS 565
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVLEHR----VNEDF---RGPAGQQ-- 510
+ + FL+P + +WV ++ E+ N + P G
Sbjct: 566 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFT 625
Query: 511 VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+G S W ++ +VF+ E ++I+V+VW F +I SY
Sbjct: 626 IGKSIWLLWA-LVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY 670
Score = 49 (22.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 110 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+L ++ ++ +L +F A E GL G VW M
Sbjct: 232 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 271
Score = 49 (22.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 26/116 (22%), Positives = 45/116 (38%)
Query: 605 LVVYNSP--EDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPK-FKTAGFG 661
+V YN P E+ + G ++ I A + YM + C + K F T G+G
Sbjct: 730 MVRYNQPRVEEALTQLKAGKLDAFIYDAA-VLNYMARK-DEGCKLVTIGSGKVFATTGYG 787
Query: 662 FVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
S + A+L D+++ +E W C + V S L +++
Sbjct: 788 IALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS--GICHNDKIEVMSSKLDIDN 841
>RGD|2740 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, N-methyl D-aspartate
2D" species:10116 "Rattus norvegicus" [GO:0001964 "startle response"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IDA;IMP] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016595 "glutamate binding" evidence=IMP]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IDA] [GO:0022843 "voltage-gated cation channel
activity" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IDA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IMP] [GO:0042165 "neurotransmitter binding" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051930 "regulation of sensory perception
of pain" evidence=ISO] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 178 (67.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 53/226 (23%), Positives = 99/226 (43%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP + + + D E G+C+D+ K + + ++ V
Sbjct: 447 PISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVT 506
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ G +N ++ +VF D +G +TI RS VDF++P+ E+G+S++V +
Sbjct: 507 NGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVA-RS 565
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVLEHR----VNEDF---RGPAGQQ-- 510
+ + FL+P + +WV ++ E+ N + P G
Sbjct: 566 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFT 625
Query: 511 VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+G S W ++ +VF+ E ++I+V+VW F +I SY
Sbjct: 626 IGKSIWLLWA-LVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY 670
Score = 49 (22.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 110 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+L ++ ++ +L +F A E GL G VW M
Sbjct: 232 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 271
Score = 49 (22.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 26/116 (22%), Positives = 45/116 (38%)
Query: 605 LVVYNSP--EDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPK-FKTAGFG 661
+V YN P E+ + G ++ I A + YM + C + K F T G+G
Sbjct: 730 MVRYNQPRVEEALTQLKAGKLDAFIYDAA-VLNYMARK-DEGCKLVTIGSGKVFATTGYG 787
Query: 662 FVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
S + A+L D+++ +E W C + V S L +++
Sbjct: 788 IALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS--GICHNDKIEVMSSKLDIDN 841
>UNIPROTKB|Q62645 [details] [associations]
symbol:Grin2d "Glutamate receptor ionotropic, NMDA 2D"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 178 (67.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 53/226 (23%), Positives = 99/226 (43%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVP 400
P + +R VP + + + D E G+C+D+ K + + ++ V
Sbjct: 447 PISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVT 506
Query: 401 YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD 460
G+ G +N ++ +VF D +G +TI RS VDF++P+ E+G+S++V +
Sbjct: 507 NGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVA-RS 565
Query: 461 SKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVLEHR----VNEDF---RGPAGQQ-- 510
+ + FL+P + +WV ++ E+ N + P G
Sbjct: 566 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFT 625
Query: 511 VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+G S W ++ +VF+ E ++I+V+VW F +I SY
Sbjct: 626 IGKSIWLLWA-LVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASY 670
Score = 49 (22.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 110 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+L ++ ++ +L +F A E GL G VW M
Sbjct: 232 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 271
Score = 49 (22.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 26/116 (22%), Positives = 45/116 (38%)
Query: 605 LVVYNSP--EDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIEPK-FKTAGFG 661
+V YN P E+ + G ++ I A + YM + C + K F T G+G
Sbjct: 730 MVRYNQPRVEEALTQLKAGKLDAFIYDAA-VLNYMARK-DEGCKLVTIGSGKVFATTGYG 787
Query: 662 FVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNS 717
S + A+L D+++ +E W C + V S L +++
Sbjct: 788 IALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS--GICHNDKIEVMSSKLDIDN 841
>UNIPROTKB|H0Y2V8 [details] [associations]
symbol:GRIN2C "Glutamate receptor, ionotropic, N-methyl
D-aspartate 2C, isoform CRA_a" species:9606 "Homo sapiens"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:CH471099 EMBL:AC068874
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 UniGene:Hs.436980
HGNC:HGNC:4587 HOVERGEN:HBG052636 HOGENOM:HOG000231061
Ensembl:ENST00000347612 UCSC:uc002jlu.1 Uniprot:H0Y2V8
Length = 873
Score = 164 (62.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 47/191 (24%), Positives = 91/191 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +V+ D +G +TI
Sbjct: 456 GFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS VDF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 516 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMF 574
Query: 496 EH----RVNEDFR------GPAGQQVGTSFWFSFSTMVFSQR---ERVISNLARIVVIVW 542
E+ N++ GPA +G S W ++ +VF+ E ++I+V+VW
Sbjct: 575 EYFSPVSYNQNLTRGKKSGGPAFT-IGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLVW 632
Query: 543 CFVVLILTQSY 553
F +I SY
Sbjct: 633 AFFAVIFLASY 643
Score = 61 (26.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 29/146 (19%), Positives = 61/146 (41%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSP--YFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S + + + P F + ++ Q + +++ + W A +
Sbjct: 111 ISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 169
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYR--SVIS-PLATDDQIEKELYKLFTMQTRVFILHM 123
G + A+ A + V +R V++ L + L + VF+ +
Sbjct: 170 SLHPGHALFLEGVRAV-ADASHVSWRLLDVVTLELGPGGPRARTQRLLRQLDAPVFVAYC 228
Query: 124 LPSLGSRIFEKANEIGLMNKGCVWIM 149
+F +A + GL+ G VW++
Sbjct: 229 SREEAEVLFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|G3N1N5 [details] [associations]
symbol:100335496 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:DAAA02039769 EMBL:DAAA02039770
Ensembl:ENSBTAT00000063398 Uniprot:G3N1N5
Length = 660
Score = 173 (66.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 203 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 261
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 262 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 321
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 322 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 379
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 380 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 436
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 437 EF-FRRSKIAVY 447
>WB|WBGene00003775 [details] [associations]
symbol:nmr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:Z78413
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00540000070221
EMBL:Z81061 GeneID:180002 KEGG:cel:CELE_T01C3.10 CTD:180002
EMBL:AF318614 RefSeq:NP_001256640.1 ProteinModelPortal:G5EEH3
SMR:G5EEH3 EnsemblMetazoa:T01C3.10a WormBase:T01C3.10a OMA:DANCALM
Uniprot:G5EEH3
Length = 990
Score = 130 (50.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 37/176 (21%), Positives = 79/176 (44%)
Query: 376 TGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVF 435
+GYCVD+ + ++ + V + + +N L+ + + D V + +
Sbjct: 518 SGYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTENGWNGLIADLMHNKADMCVTSLKLNS 577
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXX-----XXXXXXX 490
R+ +DF+LP+ ++G+S+IV I+ S + FL+P + WV
Sbjct: 578 ERARDIDFSLPFLDTGISIIVKIR-SGVLSPTAFLEPFEYSTWVIILFVCIHVAAISIFL 636
Query: 491 XXWVLEHRVN-EDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVI--SNLARIVVIVW 542
WV + N + + P + + S+W ++T+ + + S ++R++ +VW
Sbjct: 637 FEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVW 692
Score = 96 (38.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 73/393 (18%), Positives = 157/393 (39%)
Query: 5 FIIQLGNKSQVPILSFSATSPSLT--SIRSPY-FFRGSLNDSSQAGAITAIIKAFGWREA 61
+ + + + +PI++++A + T + PY + + QA A+ A+++ + W +
Sbjct: 138 YFLTAASYTGIPIIAWNADNAGFTFENDLGPYRIIQMAPPIEHQARAMLALLRRYNWPKF 197
Query: 62 VPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVI--SPLAT--DDQIEKELYKLFTMQTR 117
+ + + + ++ + L+ + +I S + T D ++ +L + Q +
Sbjct: 198 GVVTSEMAGNDRFVTAIREELELFSNKSTKFEMIHFSHMNTKNDTDVDLKLADVKKNQAK 257
Query: 118 VFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPH 177
+ +L+ + IF A ++ ++ + +WI T + T++ + G++ V H
Sbjct: 258 IILLYANAAQAGTIFSHAEKMDMIGEKYLWIGTQSVKGTQTTVKAP---AQAGMLCVNFH 314
Query: 178 VPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDK 237
+ N + + L P I+ + +FG A ++ F K
Sbjct: 315 T-----VSNAMFAPRDDIL---PLIIQLAPKLFG----------AALLQLRPNEMFSL-K 355
Query: 238 TNVSRNATDLEAFGISQNGPKLLQALSSTRFKGL---TGD------YIFVD-GQLQSSAF 287
+NVS + D + + NG + + + + KG D Y F G+L++S
Sbjct: 356 SNVSCKSEDGDPYW--DNGKYIYEHMKAAFVKGNPFHVDDGHDSFFYTFEKTGRLRNSIL 413
Query: 288 EIINVNNGARGVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKL 347
+I N+ ++G W EK + WPG+ + P+G + K +
Sbjct: 414 QISNLRTNSKGEKTW--EK-----VGIFTNNELKMADVQWPGEKANPPQGAADKFHVKVV 466
Query: 348 RIGVPVKKGFSDFVNVTIDPKTQE-PTSVTGYC 379
+ P SD +DP TQ+ P + C
Sbjct: 467 TLHEPPFIAVSD-----VDPDTQKCPGNQGSIC 494
Score = 79 (32.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 51/265 (19%), Positives = 101/265 (38%)
Query: 474 TWD--LWVTXXXXXXXXXXXXWVLEHRVN-EDFRGPAGQ-QVGTSFWFSFSTMVFSQRER 529
TW L+V WV + N + + P + + S+W ++T+ +
Sbjct: 618 TWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVST 677
Query: 530 VI--SNLARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVK--MLIKRGDNVGY 585
+ S ++R++ +VW L Y ++ + ML D
Sbjct: 678 DVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFPHD---- 733
Query: 586 QKGSFVLGILKQLGFDERKLVVYNSPEDC--HELFQKGSVNGGIAAA----FDEIPYMKL 639
QK F G + E ++ + H + + +++ GI A D Y +
Sbjct: 734 QKPPFRFGTVDGGNTHETMKRNWHKMHEYVKHNKYFRMNISAGIEAVKNEELDAFIYDAV 793
Query: 640 LIGQYCSKYA----MIEPKFKT-AGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 694
++ + K A M K+ + G+G FP +SP V+ +L + ++ +++ W
Sbjct: 794 VLDYWAGKDANCALMTVGKWASMTGYGIGFPKNSPHTSLVNHYMLQYQQKGDLERLQNFW 853
Query: 695 FKKHSSC-PDASTVVSSRSLGLNSF 718
+C PD+ + S LG+ +F
Sbjct: 854 LT--GACTPDSHSQTQSAPLGIENF 876
>UNIPROTKB|Q12879 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0009611 "response
to wounding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030431
"sleep" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0042417 "dopamine metabolic process"
evidence=IEA] [GO:0042428 "serotonin metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0006810
"transport" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007611 "learning or memory" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0009986 "cell surface"
evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0071363 GO:GO:0022008 GO:GO:0051592 GO:GO:0042493
GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007268 GO:GO:0007613 GO:GO:0019233 GO:GO:0030431
GO:GO:0005262 GO:GO:0051930 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 GO:GO:0008542 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043065
GO:GO:0001508 GO:GO:0009743 GO:GO:0071294 GO:GO:0042177
DrugBank:DB00145 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597 GO:GO:0071230
GO:GO:0071396 DrugBank:DB00836 GO:GO:0001964 DrugBank:DB01043
DrugBank:DB00949 GO:GO:0016595 GO:GO:0071287 GO:GO:0017146
GO:GO:0071286 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 EMBL:U09002 EMBL:U90277
EMBL:AC006531 EMBL:AC007218 EMBL:AC022168 EMBL:AC026423
EMBL:AC133565 EMBL:BC117131 EMBL:BC143273 IPI:IPI00029768
PIR:S47555 RefSeq:NP_000824.1 RefSeq:NP_001127879.1
RefSeq:NP_001127880.1 UniGene:Hs.411472 PDB:3NFL PDBsum:3NFL
ProteinModelPortal:Q12879 SMR:Q12879 MINT:MINT-414776 STRING:Q12879
PhosphoSite:Q12879 DMDM:14285603 PaxDb:Q12879 PRIDE:Q12879
DNASU:2903 Ensembl:ENST00000330684 Ensembl:ENST00000396573
Ensembl:ENST00000396575 Ensembl:ENST00000404927
Ensembl:ENST00000562109 GeneID:2903 KEGG:hsa:2903 UCSC:uc002czo.4
CTD:2903 GeneCards:GC16M009762 HGNC:HGNC:4585 HPA:CAB022725
MIM:138253 MIM:613971 neXtProt:NX_Q12879 Orphanet:289266
PharmGKB:PA28979 HOVERGEN:HBG052635 InParanoid:Q12879 KO:K05209
OMA:CRSCLSN OrthoDB:EOG4X0MRG PhylomeDB:Q12879 BindingDB:Q12879
ChEMBL:CHEMBL1972 EvolutionaryTrace:Q12879 GenomeRNAi:2903
NextBio:11495 ArrayExpress:Q12879 Bgee:Q12879 CleanEx:HS_GRIN2A
Genevestigator:Q12879 GermOnline:ENSG00000183454 GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 Uniprot:Q12879
Length = 1464
Score = 155 (59.6 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 424 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 477
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 478 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 537
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 538 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 596
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 597 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 645
Score = 65 (27.9 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 756 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 813
Query: 715 LNS 717
+++
Sbjct: 814 IDN 816
Score = 56 (24.8 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 34/160 (21%), Positives = 64/160 (40%)
Query: 15 VPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWRE-AVPIYVDNQYG 71
VPIL + + + + P FF+ + QA + I++ + W ++ + Y
Sbjct: 122 VPILGIHGGASMIMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTTIFPGY- 180
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
E I + + ++VI+ L T + K +L + + V +L+ I
Sbjct: 181 REFISFVKTTVDNSFVGWDMQNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLI 239
Query: 132 FEKANEIGLMNKGCVWI---MTDGMTNLLRTLEPSVIDSM 168
+A +GL WI + G T L+ PS + S+
Sbjct: 240 LSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISV 279
Score = 46 (21.3 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 208 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 267
Query: 290 I 290
I
Sbjct: 268 I 268
>UNIPROTKB|Q5IS45 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9598 "Pan troglodytes" [GO:0008270 "zinc ion binding"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0009986 GO:GO:0008104
GO:GO:0009611 GO:GO:0022008 GO:GO:0042493 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0019233 GO:GO:0030431
GO:GO:0005262 GO:GO:0051930 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 GO:GO:0035235 GO:GO:0008542 GO:GO:0060079
GO:GO:0042734 GO:GO:0001975 GO:GO:0030288 GO:GO:0043065
GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828 GO:GO:0042428
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0004972 CTD:2903 HOVERGEN:HBG052635 KO:K05209
OrthoDB:EOG4X0MRG GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 EMBL:AY665283 RefSeq:NP_001029361.1
UniGene:Ptr.6230 ProteinModelPortal:Q5IS45 SMR:Q5IS45 STRING:Q5IS45
PRIDE:Q5IS45 GeneID:454396 KEGG:ptr:454396 InParanoid:Q5IS45
NextBio:20836053 Uniprot:Q5IS45
Length = 1464
Score = 155 (59.6 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 424 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 477
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 478 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 537
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 538 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 596
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 597 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 645
Score = 65 (27.9 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 756 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 813
Query: 715 LNS 717
+++
Sbjct: 814 IDN 816
Score = 56 (24.8 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 34/160 (21%), Positives = 64/160 (40%)
Query: 15 VPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWRE-AVPIYVDNQYG 71
VPIL + + + + P FF+ + QA + I++ + W ++ + Y
Sbjct: 122 VPILGIHGGASMIMNDKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTTIFPGY- 180
Query: 72 EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRI 131
E I + + ++VI+ L T + K +L + + V +L+ I
Sbjct: 181 REFISFVKTTVDNSFVGWDMQNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLI 239
Query: 132 FEKANEIGLMNKGCVWI---MTDGMTNLLRTLEPSVIDSM 168
+A +GL WI + G T L+ PS + S+
Sbjct: 240 LSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISV 279
Score = 46 (21.3 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 208 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 267
Query: 290 I 290
I
Sbjct: 268 I 268
>UNIPROTKB|I3L8N9 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AEMK01190335 EMBL:CU855529
EMBL:CU972413 EMBL:FP312660 Ensembl:ENSSSCT00000027751
Uniprot:I3L8N9
Length = 883
Score = 173 (66.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYCVD+ + + + VP YG D + +N +V ++ G+ + + +TI
Sbjct: 426 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 484
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXW 493
R +DF+ P+ G+S+++ K + FL PL +++W+ +
Sbjct: 485 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 544
Query: 494 VLE-------HRVN-EDFR-GPAGQ---QVG--TSFWFSFSTMVFSQRERVIS--NLA-R 536
++ H ED + GP+ Q + G S WFS F Q+ IS +L+ R
Sbjct: 545 LVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGR 602
Query: 537 IVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILK 596
IV VW F LI+ SY I + L K+ + + Y G+ G K
Sbjct: 603 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 659
Query: 597 QLGFDERKLVVY 608
+ F K+ VY
Sbjct: 660 EF-FRRSKIAVY 670
>UNIPROTKB|F1M526 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951061
ProteinModelPortal:F1M526 Ensembl:ENSRNOT00000067570
ArrayExpress:F1M526 Uniprot:F1M526
Length = 832
Score = 152 (58.6 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 438 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 497
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 498 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 557
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 558 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 617
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 618 FFTLIIISSY 627
Score = 71 (30.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 59/290 (20%), Positives = 116/290 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ S R ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 85 NALEVPHIQTRWKHPSVDS-RDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDST- 142
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP-SLGS 129
G + L A + ++ R + P A D K L K +++ +
Sbjct: 143 GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KPLLKEMKKSKEFYVIFDCSHETAA 198
Query: 130 RIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVPKTKAL 184
I ++ +G+M + + T D L S ++ M G ++ + PHV + +
Sbjct: 199 EILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV--SSII 255
Query: 185 ENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
E +W LQ P + L + G++ +A + +AV I S + VS +
Sbjct: 256 E----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLTVS--S 306
Query: 245 TDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
+ GP+ + + R+ GLTG F DG + +II++
Sbjct: 307 LQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISL 356
Score = 40 (19.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 48 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 81
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 332 GLTGRITFNKTDGLRKDFDLDIISLKEEG 360
>UNIPROTKB|Q296F7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004970
"ionotropic glutamate receptor activity" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007616 "long-term
memory" evidence=ISS] [GO:0008355 "olfactory learning"
evidence=ISS] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISS] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS] [GO:0042391 "regulation
of membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0007616 GO:GO:0042391 EMBL:CM000070 InterPro:IPR001828
GO:GO:0055074 GenomeReviews:CM000070_GR GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HSSP:P19491 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
RefSeq:XP_001359355.1 ProteinModelPortal:Q296F7 GeneID:4802433
KEGG:dpo:Dpse_GA15505 FlyBase:FBgn0075522 InParanoid:Q296F7
Uniprot:Q296F7
Length = 1004
Score = 110 (43.8 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 537 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 595
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 596 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 655
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 656 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 715
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 716 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 774
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 775 TAGE-LFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIFHGH 824
Score = 105 (42.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 41/197 (20%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ +++G+ + L+ ++ D
Sbjct: 479 GYCIDLLIELSKRINFTYDLALSPDGQFGHYLLRNNTGAMTLRKEWTGLMGELVNERADM 538
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 539 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 597
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 598 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 657
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 658 VLGMVWAGFAMIIVASY 674
Score = 86 (35.3 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 47/198 (23%), Positives = 74/198 (37%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 344 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVG-----KFSYD 398
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIG----VPVKKGFSDFVNVTID 366
IIWPG P+G +PT+ K L I V V++ D D
Sbjct: 399 SMRAKMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPD 458
Query: 367 PK----------TQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY---N 413
+ T GYC+D+ + + + + YD PDG G Y N
Sbjct: 459 ERPCPLFNATDSTANEYCCRGYCIDLLIELSKRINFT--YDLAL--SPDGQF-GHYLLRN 513
Query: 414 DLVYQVFLGEFDAVVGDI 431
+ E+ ++G++
Sbjct: 514 NTGAMTLRKEWTGLMGEL 531
Score = 76 (31.8 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 172 QADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 231
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 232 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>ZFIN|ZDB-GENE-081104-209 [details] [associations]
symbol:si:ch211-264f5.8 "si:ch211-264f5.8"
species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-081104-209 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:CU207217 EMBL:CABZ01071364 EMBL:CABZ01071365
EMBL:CABZ01071366 IPI:IPI00961248 Ensembl:ENSDART00000114472
Uniprot:F1R276
Length = 979
Score = 120 (47.3 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + L ++ V YG P+ +GS+ +V ++ + D V TI
Sbjct: 419 GFCVDMLRELADILKFSFRIKLVDDGLYGAPE--PNGSWTGMVGELINRKADLAVAGFTI 476
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 477 TSEREKVIDFSKPFMNLGISILYRVHIGRKPGYFSFLDPFSPAVWL 522
Score = 78 (32.5 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 45/198 (22%), Positives = 77/198 (38%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXX 569
+G S WF + E + L+ R V VW LI+ SY
Sbjct: 566 LGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVP 625
Query: 570 ITDVKMLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGG 626
I + L + N+ Y Q GS + + +++ Y + +F K S G
Sbjct: 626 IESAEDLADQ-TNIQYGTIQGGSTMTFFMNSRYQTYQRMWNYMYSKQ-PSVFVK-STEEG 682
Query: 627 IAAAFDEIPYMKLL---IGQY-----CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAI 678
IA + Y LL + +Y C+ I T G+G PL SP +++ I
Sbjct: 683 IARVLNS-KYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEITLGI 740
Query: 679 LNVTEGDKMKEIEDAWFK 696
L + E ++++ ++ W++
Sbjct: 741 LQLQENNRLEILKRRWWE 758
Score = 73 (30.8 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 60/285 (21%), Positives = 113/285 (39%)
Query: 31 RSPY--FFRGSLNDSSQ--AGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAID 86
R PY F +L S++ + AI AI+++FG+ A I E + L + ++
Sbjct: 101 RLPYLRFASVTLYPSNEDLSLAIGAILRSFGYPTASLICAK----AECLLRLEELVRHF- 155
Query: 87 TRVPYRSVISPLATDDQIEKE--LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKG 144
+ R +S D+ ++ L ++ + I+ S+ I +KA+E+G+ +
Sbjct: 156 --LISRETLSVRMLDENLDPTPLLKEIRDDKVATIIIDANASVSILILKKASELGMTSAF 213
Query: 145 CVWIMTDGMTNLLRTLEPSVIDSMQGVIGVG----PHVPKTKALENFRVRWKRNF-LQEN 199
+I+T LLR L+ V++ ++G H + + + + W+ L
Sbjct: 214 YKYILTTMDFPLLR-LD-DVVNDQSNIVGFSMLNNSHPFYLEFIRSLNLSWREGCDLSPY 271
Query: 200 PSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKL 259
P + L +DA + AV + + + + I Q+G L
Sbjct: 272 PGPA-----LSSALMFDAVHVVVGAVRELNRSQ------EIGVKPLSCTSSLIWQHGTSL 320
Query: 260 LQALSSTRFKGLTGDYIFVD-GQLQSSAFEIIN-VNNGARGVGFW 302
+ L + GLTG F GQ + I+ G + +G W
Sbjct: 321 MNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKFKGGHKEIGVW 365
Score = 53 (23.7 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 163 SVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLLA---YDATR 219
+++D Q G G + A EN N L E P+ VE++IF L Y+ T
Sbjct: 2 AILDD-QSACGRGERLALALARENI------NSLMEGPARARVEVDIFELQRDSQYETTD 54
Query: 220 ALAEAVEKAGITSFG 234
+ + + K ++ G
Sbjct: 55 TMCQILPKGVVSVIG 69
>MGI|MGI:95820 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, NMDA2A (epsilon
1)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001964 "startle response"
evidence=IGI;IMP] [GO:0001975 "response to amphetamine"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity"
evidence=ISO;IMP] [GO:0005262 "calcium channel activity"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IGI;IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0007612 "learning" evidence=IMP] [GO:0007613
"memory" evidence=ISO;IMP] [GO:0007626 "locomotory behavior"
evidence=TAS] [GO:0008021 "synaptic vesicle" evidence=IDA]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008542 "visual learning"
evidence=IMP] [GO:0009611 "response to wounding" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IPI] [GO:0019233
"sensory perception of pain" evidence=IMP] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0030431 "sleep" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033058 "directional locomotion"
evidence=IGI] [GO:0034220 "ion transmembrane transport"
evidence=IMP] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IGI;IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0040011 "locomotion" evidence=IMP]
[GO:0042165 "neurotransmitter binding" evidence=ISO] [GO:0042177
"negative regulation of protein catabolic process" evidence=IGI]
[GO:0042391 "regulation of membrane potential" evidence=IMP]
[GO:0042417 "dopamine metabolic process" evidence=IMP] [GO:0042428
"serotonin metabolic process" evidence=IMP] [GO:0042493 "response
to drug" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISA] [GO:0045202 "synapse"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=ISO] [GO:0048167 "regulation of
synaptic plasticity" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050804 "regulation of
synaptic transmission" evidence=IMP] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051117 "ATPase binding" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051930
"regulation of sensory perception of pain" evidence=IMP]
[GO:0060078 "regulation of postsynaptic membrane potential"
evidence=IMP] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISO;IGI;IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=IMP] [GO:0071230 "cellular
response to amino acid stimulus" evidence=ISO] [GO:0071294
"cellular response to zinc ion" evidence=ISO] [GO:0097110 "scaffold
protein binding" evidence=ISO] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95820
GO:GO:0021987 GO:GO:0021766 GO:GO:0048167 GO:GO:0014069
GO:GO:0009986 GO:GO:0008104 GO:GO:0009611 GO:GO:0071363
GO:GO:0022008 GO:GO:0051592 GO:GO:0042493 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0042220 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0008270
GO:GO:0008542 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0007626 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288
GO:GO:0051707 GO:GO:0043065 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169
GO:GO:0042417 InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843
GO:GO:0004972 CTD:2903 HOVERGEN:HBG052635 KO:K05209 OMA:CRSCLSN
OrthoDB:EOG4X0MRG GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
EMBL:D10217 IPI:IPI00118380 PIR:S29159 RefSeq:NP_032196.2
UniGene:Mm.2953 ProteinModelPortal:P35436 SMR:P35436 DIP:DIP-31567N
IntAct:P35436 MINT:MINT-103939 STRING:P35436 PhosphoSite:P35436
PaxDb:P35436 PRIDE:P35436 DNASU:14811 Ensembl:ENSMUST00000032331
Ensembl:ENSMUST00000115835 GeneID:14811 KEGG:mmu:14811
UCSC:uc007ydc.1 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
InParanoid:P35436 BindingDB:P35436 ChEMBL:CHEMBL2521 NextBio:286999
Bgee:P35436 Genevestigator:P35436 GermOnline:ENSMUSG00000059003
Uniprot:P35436
Length = 1464
Score = 155 (59.6 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 424 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 477
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 478 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 537
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 538 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 596
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 597 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 645
Score = 65 (27.9 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 756 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 813
Query: 715 LNS 717
+++
Sbjct: 814 IDN 816
Score = 55 (24.4 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 32/166 (19%), Positives = 68/166 (40%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWRE-AVPIY 65
+ +++ +PIL + + + + P FF+ + QA + I++ + W ++
Sbjct: 116 ISSQTFIPILGIHGGASMIMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTT 175
Query: 66 VDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP 125
+ Y + I + + ++VI+ L T + K +L + + V +L+
Sbjct: 176 IFPGY-RDFISFIKTTVDNSFVGWDMQNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSK 233
Query: 126 SLGSRIFEKANEIGLMNKGCVWI---MTDGMTNLLRTLEPSVIDSM 168
I +A +GL WI + G T L+ PS + S+
Sbjct: 234 DEAVLILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISV 279
Score = 46 (21.3 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 208 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 267
Query: 290 I 290
I
Sbjct: 268 I 268
>UNIPROTKB|G3V9C5 [details] [associations]
symbol:Grin2a "RCG49797, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0001964 "startle response" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0009611 "response to wounding"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030431 "sleep" evidence=IEA]
[GO:0033058 "directional locomotion" evidence=IEA] [GO:0042177
"negative regulation of protein catabolic process" evidence=IEA]
[GO:0042417 "dopamine metabolic process" evidence=IEA] [GO:0042428
"serotonin metabolic process" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2737 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 CTD:2903 KO:K05209
OMA:CRSCLSN InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 RefSeq:NP_036705.3 UniGene:Rn.9710
GeneID:24409 KEGG:rno:24409 NextBio:603227 EMBL:CH474017
Ensembl:ENSRNOT00000044626 Uniprot:G3V9C5
Length = 1464
Score = 155 (59.6 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 424 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 477
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 478 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 537
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 538 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 596
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 597 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 645
Score = 65 (27.9 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 756 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 813
Query: 715 LNS 717
+++
Sbjct: 814 IDN 816
Score = 55 (24.4 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 32/166 (19%), Positives = 68/166 (40%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWRE-AVPIY 65
+ +++ +PIL + + + + P FF+ + QA + I++ + W ++
Sbjct: 116 ISSQTFIPILGIHGGASMIMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTT 175
Query: 66 VDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP 125
+ Y + I + + ++VI+ L T + K +L + + V +L+
Sbjct: 176 IFPGY-RDFISFIKTTVDNSFVGWDMQNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSK 233
Query: 126 SLGSRIFEKANEIGLMNKGCVWI---MTDGMTNLLRTLEPSVIDSM 168
I +A +GL WI + G T L+ PS + S+
Sbjct: 234 DEAVLILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISV 279
Score = 46 (21.3 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 208 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 267
Query: 290 I 290
I
Sbjct: 268 I 268
>UNIPROTKB|B3P2E5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7220 "Drosophila erecta" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH954181 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001978937.1
ProteinModelPortal:B3P2E5 EnsemblMetazoa:FBtr0131035 GeneID:6552207
KEGG:der:Dere_GG10981 FlyBase:FBgn0103284 Uniprot:B3P2E5
Length = 997
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ +S+G+ + L+ ++ D
Sbjct: 467 GYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNERADM 526
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 645
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 646 VLGMVWAGFAMIIVASY 662
Score = 109 (43.4 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 762
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 763 TAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGH 812
Score = 86 (35.3 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 47/198 (23%), Positives = 75/198 (37%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVG-----KFSYD 386
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIG----VPVKKGFSDFVNVTID 366
IIWPG P+G +PT+ K L I V V++ D D
Sbjct: 387 SMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPD 446
Query: 367 PK------TQEPTS----VTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY---N 413
+ + T+ GYC+D+ + + + + YD PDG G Y N
Sbjct: 447 ERPCPLFNNSDATANEFCCRGYCIDLLIELSKRINFT--YDLAL--SPDGQF-GHYILRN 501
Query: 414 DLVYQVFLGEFDAVVGDI 431
E+ ++G++
Sbjct: 502 STGAMTLRKEWTGLIGEL 519
Score = 76 (31.8 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 160 QADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 219
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 220 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4I414 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7238 "Drosophila sechellia" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH480821 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002038420.1
ProteinModelPortal:B4I414 EnsemblMetazoa:FBtr0193612 GeneID:6613956
KEGG:dse:Dsec_GM10627 FlyBase:FBgn0165573 Uniprot:B4I414
Length = 997
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ +S+G+ + L+ ++ D
Sbjct: 467 GYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNERADM 526
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 645
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 646 VLGMVWAGFAMIIVASY 662
Score = 109 (43.4 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 762
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 763 TAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGH 812
Score = 86 (35.3 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 47/198 (23%), Positives = 75/198 (37%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVG-----KFSYD 386
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIG----VPVKKGFSDFVNVTID 366
IIWPG P+G +PT+ K L I V V++ D D
Sbjct: 387 SMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPD 446
Query: 367 PK------TQEPTS----VTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY---N 413
+ + T+ GYC+D+ + + + + YD PDG G Y N
Sbjct: 447 ERPCPLFNNSDATANEFCCRGYCIDLLIELSKRINFT--YDLAL--SPDGQF-GHYILRN 501
Query: 414 DLVYQVFLGEFDAVVGDI 431
E+ ++G++
Sbjct: 502 STGAMTLRKEWTGLIGEL 519
Score = 76 (31.8 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 160 QADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 219
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 220 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4PVB0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7245 "Drosophila yakuba" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
EMBL:CM000160 InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002096067.1 ProteinModelPortal:B4PVB0 STRING:B4PVB0
EnsemblMetazoa:FBtr0271792 GeneID:6535418 KEGG:dya:Dyak_GE25274
FlyBase:FBgn0242356 Uniprot:B4PVB0
Length = 997
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ +S+G+ + L+ ++ D
Sbjct: 467 GYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNERADM 526
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 645
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 646 VLGMVWAGFAMIIVASY 662
Score = 109 (43.4 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 762
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 763 TAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGH 812
Score = 86 (35.3 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 47/198 (23%), Positives = 75/198 (37%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVG-----KFSYD 386
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIG----VPVKKGFSDFVNVTID 366
IIWPG P+G +PT+ K L I V V++ D D
Sbjct: 387 SMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPD 446
Query: 367 PK------TQEPTS----VTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY---N 413
+ + T+ GYC+D+ + + + + YD PDG G Y N
Sbjct: 447 ERPCPLFNNSDATANEFCCRGYCIDLLIELSKRINFT--YDLAL--SPDGQF-GHYILRN 501
Query: 414 DLVYQVFLGEFDAVVGDI 431
E+ ++G++
Sbjct: 502 STGAMTLRKEWTGLIGEL 519
Score = 76 (31.8 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 160 QADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 219
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 220 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4QWW7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7240 "Drosophila simulans" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CM000364 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002102226.1
ProteinModelPortal:B4QWW7 EnsemblMetazoa:FBtr0219522 GeneID:6726819
KEGG:dsi:Dsim_GD19612 FlyBase:FBgn0191104 Uniprot:B4QWW7
Length = 997
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ +S+G+ + L+ ++ D
Sbjct: 467 GYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNERADM 526
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 645
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 646 VLGMVWAGFAMIIVASY 662
Score = 109 (43.4 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 762
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 763 TAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGH 812
Score = 86 (35.3 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 47/198 (23%), Positives = 75/198 (37%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVG-----KFSYD 386
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIG----VPVKKGFSDFVNVTID 366
IIWPG P+G +PT+ K L I V V++ D D
Sbjct: 387 SMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPD 446
Query: 367 PK------TQEPTS----VTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY---N 413
+ + T+ GYC+D+ + + + + YD PDG G Y N
Sbjct: 447 ERPCPLFNNSDATANEFCCRGYCIDLLIELSKRINFT--YDLAL--SPDGQF-GHYILRN 501
Query: 414 DLVYQVFLGEFDAVVGDI 431
E+ ++G++
Sbjct: 502 STGAMTLRKEWTGLIGEL 519
Score = 76 (31.8 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 160 QADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 219
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 220 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4GF83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7234 "Drosophila persimilis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH479182 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002017168.1
ProteinModelPortal:B4GF83 EnsemblMetazoa:FBtr0187775 GeneID:6591341
KEGG:dpe:Dper_GL22160 FlyBase:FBgn0159752 Uniprot:B4GF83
Length = 1004
Score = 110 (43.8 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 537 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 595
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 596 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 655
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 656 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 715
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 716 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 774
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 775 TAGE-LFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIFHGH 824
Score = 108 (43.1 bits), Expect = 8.5e-09, Sum P(3) = 8.5e-09
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ ++SG+ + L+ ++ D
Sbjct: 479 GYCIDLLIELSKRINFTYDLALSPDGQFGHYLLRNNSGAMTLRKEWTGLMGELVNERADM 538
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 539 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 597
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 598 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 657
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 658 VLGMVWAGFAMIIVASY 674
Score = 85 (35.0 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 28/99 (28%), Positives = 40/99 (40%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 344 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVG-----KFSYD 398
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRI 349
IIWPG P+G +PT+ K L I
Sbjct: 399 SMRAKMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTI 437
Score = 76 (31.8 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 172 QADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 231
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 232 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>DICTYBASE|DDB_G0291356 [details] [associations]
symbol:grlE "GABA-B receptor protein" species:44689
"Dictyostelium discoideum" [GO:0008066 "glutamate receptor
activity" evidence=IMP] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IMP] [GO:0004965 "G-protein coupled
GABA receptor activity" evidence=IEA;IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0031152 "aggregation involved in
sorocarp development" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA;IDA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006935 "chemotaxis" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000337
InterPro:IPR002455 InterPro:IPR017978 Pfam:PF00003 PRINTS:PR00248
PRINTS:PR01176 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 dictyBase:DDB_G0291356 Pfam:PF01094 GO:GO:0016021
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0007214
InterPro:IPR001828 GO:GO:0031152 GO:GO:0043327 eggNOG:NOG273984
KO:K04615 GO:GO:0004965 GO:GO:0008066 EMBL:DQ447637
RefSeq:XP_635160.1 ProteinModelPortal:Q54ET0 STRING:Q54ET0
GeneID:8628106 KEGG:ddi:DDB_G0291356 Uniprot:Q54ET0
Length = 816
Score = 171 (65.3 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 83/304 (27%), Positives = 129/304 (42%)
Query: 15 VPILSFSATSPSLTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEE 73
VP +SF AT SL++ S PYF R +D Q AI +++K GW I+ + YG
Sbjct: 125 VPSISFYATGASLSNSGSYPYFQRVMPDDRLQVQAILSLLKKNGWTRVSCIHTNEDYGNG 184
Query: 74 MIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE-LY------KLFTMQTRVFILHML-P 125
L A V I P+ D+ I E LY L ++RV +L+ L P
Sbjct: 185 GADQLVQQSNAQGITVNTNQAIDPV--DNGIAPEQLYYDIVFDNLEAAKSRVIVLYALFP 242
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHVPK-TKAL 184
I+++A G + +G WI+TDG L +P ++ GV+ P T+A
Sbjct: 243 PDCLEIWKQAKARGFLGEGFTWIVTDGCAELTGGTDPDLL----GVLATFPSYGLGTEAY 298
Query: 185 ENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
+F R N N + F +YDAT A+ +E + + G D + +
Sbjct: 299 TDFE-RTIVNDYNNNTGDAFYKGASF---SYDATYAMLMGIE--AVLAKGGDPWDGEQVR 352
Query: 245 TDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIINVNNGARG-VGFWT 303
T+L + NG + F TGD ++ G+ + +IN G+ +G
Sbjct: 353 TELR--NLKFNG-----ITGTIAFDKNTGDRLY--GEF--ALLNLINSTKGSFDPIGKIN 401
Query: 304 PEKG 307
P+ G
Sbjct: 402 PDSG 405
>UNIPROTKB|Q14957 [details] [associations]
symbol:GRIN2C "Glutamate receptor ionotropic, NMDA 2C"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005737 GO:GO:0014069
GO:GO:0008104 GO:GO:0005887 GO:GO:0009611 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0050885 GO:GO:0060079
DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261 EMBL:AC068874
GO:GO:0042177 DrugBank:DB00145 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565 EMBL:L76224
EMBL:BC140801 IPI:IPI00215887 RefSeq:NP_000826.2 UniGene:Hs.436980
ProteinModelPortal:Q14957 SMR:Q14957 MINT:MINT-1776011
STRING:Q14957 TCDB:1.A.10.1.3 PhosphoSite:Q14957 DMDM:215274091
PaxDb:Q14957 PRIDE:Q14957 Ensembl:ENST00000293190 GeneID:2905
KEGG:hsa:2905 UCSC:uc002jlt.1 CTD:2905 GeneCards:GC17M072854
H-InvDB:HIX0039170 HGNC:HGNC:4587 HPA:HPA041666 MIM:138254
neXtProt:NX_Q14957 PharmGKB:PA28981 HOVERGEN:HBG052636
InParanoid:Q14957 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
PhylomeDB:Q14957 BindingDB:Q14957 ChEMBL:CHEMBL4109 GenomeRNAi:2905
NextBio:11503 ArrayExpress:Q14957 Bgee:Q14957 CleanEx:HS_GRIN2C
Genevestigator:Q14957 GermOnline:ENSG00000161509 Uniprot:Q14957
Length = 1233
Score = 164 (62.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 47/191 (24%), Positives = 91/191 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +V+ D +G +TI
Sbjct: 456 GFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS VDF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 516 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMF 574
Query: 496 EH----RVNEDFR------GPAGQQVGTSFWFSFSTMVFSQR---ERVISNLARIVVIVW 542
E+ N++ GPA +G S W ++ +VF+ E ++I+V+VW
Sbjct: 575 EYFSPVSYNQNLTRGKKSGGPAFT-IGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLVW 632
Query: 543 CFVVLILTQSY 553
F +I SY
Sbjct: 633 AFFAVIFLASY 643
Score = 61 (26.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 29/146 (19%), Positives = 61/146 (41%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSP--YFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S + + + P F + ++ Q + +++ + W A +
Sbjct: 111 ISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 169
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYR--SVIS-PLATDDQIEKELYKLFTMQTRVFILHM 123
G + A+ A + V +R V++ L + L + VF+ +
Sbjct: 170 SLHPGHALFLEGVRAV-ADASHVSWRLLDVVTLELGPGGPRARTQRLLRQLDAPVFVAYC 228
Query: 124 LPSLGSRIFEKANEIGLMNKGCVWIM 149
+F +A + GL+ G VW++
Sbjct: 229 SREEAEVLFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|B3LZ39 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7217 "Drosophila ananassae" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH902617 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 RefSeq:XP_001953330.1
ProteinModelPortal:B3LZ39 STRING:B3LZ39 EnsemblMetazoa:FBtr0122404
GeneID:6500487 KEGG:dan:Dana_GF17704 FlyBase:FBgn0094722
InParanoid:B3LZ39 KO:K05208 OrthoDB:EOG4RXWF5 InterPro:IPR018882
Pfam:PF10562 Uniprot:B3LZ39
Length = 994
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 42/197 (21%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ +S+G+ + L+ ++ D
Sbjct: 464 GYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNERADM 523
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 524 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 582
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 583 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 642
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 643 VLGMVWAGFAMIIVASY 659
Score = 109 (43.4 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 522 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 580
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 581 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 640
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 641 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 700
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 701 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 759
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 760 TAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGH 809
Score = 85 (35.0 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 47/198 (23%), Positives = 75/198 (37%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 329 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVG-----KFSYD 383
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIG----VPVKKGFSDFVNVTID 366
IIWPG P+G +PT+ K L I V V++ D D
Sbjct: 384 NERAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPD 443
Query: 367 PK------TQEPTS----VTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY---N 413
+ + T+ GYC+D+ + + + + YD PDG G Y N
Sbjct: 444 ERPCPLFNASDATANEFCCRGYCIDLLIELSKRINFT--YDLAL--SPDGQF-GHYILRN 498
Query: 414 DLVYQVFLGEFDAVVGDI 431
E+ ++G++
Sbjct: 499 STGAMTLRKEWTGLIGEL 516
Score = 76 (31.8 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 157 QADVWLEMLSHFSYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 216
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 217 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 267
>UNIPROTKB|F1NZT2 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0035235
GO:GO:0042734 GO:GO:0032230 GO:GO:0051899 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AADN02010740
EMBL:AADN02010741 IPI:IPI00602891 ProteinModelPortal:F1NZT2
Ensembl:ENSGALT00000025530 Uniprot:F1NZT2
Length = 874
Score = 146 (56.5 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 46/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + V G+ + G +N +V ++ + D V +TI +
Sbjct: 431 GYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 490
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 491 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 550
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 551 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 610
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 611 FFTLIIISSY 620
Score = 75 (31.5 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 56/275 (20%), Positives = 103/275 (37%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVIS------PLATD 101
A+ ++ + W+ +Y D+ G + L A + ++ R + S PL +
Sbjct: 129 AVLDLVLYYNWKIVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQLPSGNKDARPLLKE 187
Query: 102 DQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
+ KE Y +F H + I ++ +G+M + + T + LE
Sbjct: 188 MKKGKEFYVIFDCS------H---ETAAEILKQILSMGMMTEYYHYFFTT-LDLFALDLE 237
Query: 162 PSVID--SMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPS----IVDVELNIFGLLAY 215
P +M G + P+ ++ +W LQ P ++D + L Y
Sbjct: 238 PYRYSGVNMTGFRLLNIENPQVSSVIE---KWSMERLQAPPKPETGLLDGMMTTEAALMY 294
Query: 216 DATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDY 275
DA +A A ++A + VS + + GP+ + + R+ GLTG
Sbjct: 295 DAVYMVAVASQRAS-------QMTVS--SLQCHRHKPWRFGPRFMNLIKEARWDGLTGRI 345
Query: 276 IF--VDGQLQSSAFEIINVNN-GARGVGFWTPEKG 307
F DG + +II++ G +G W G
Sbjct: 346 TFNKTDGLRKDFDLDIISLKEEGTEKIGVWNSYSG 380
Score = 40 (19.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 217 ATRALAEAVEKAGIT----SFGFDKTNVSRNAT 245
+T + E VE + +F F TN++RN T
Sbjct: 7 STGGIFETVENEPVNIEELAFKFAVTNINRNRT 39
Score = 40 (19.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 56 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 89
>FB|FBgn0039927 [details] [associations]
symbol:CG11155 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0016020 GO:GO:0030054
GO:GO:0045211 GO:GO:0030288 InterPro:IPR001828 EMBL:AE014135
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
FlyBase:FBgn0039927 UniGene:Dm.10449 GeneID:43822
KEGG:dme:Dmel_CG11155 GenomeRNAi:43822 NextBio:836052 EMBL:BT044556
RefSeq:NP_651941.2 RefSeq:NP_726649.2 SMR:Q9V4A0
EnsemblMetazoa:FBtr0089195 EnsemblMetazoa:FBtr0333701
UCSC:CG11155-RA UCSC:CG11155-RC InParanoid:Q9V4A0 OMA:DIPHIEV
Uniprot:Q9V4A0
Length = 910
Score = 157 (60.3 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 329 GDSTSDPKGWEVPTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQ 388
G + SDP + +N + + V ++ +V V D G+C+D+ KA+
Sbjct: 408 GVNISDPTAF-YDSNIANITLVVMTREE-RPYVMVKEDKNLTGNLRFEGFCIDLLKAIAT 465
Query: 389 ELPYAVAYDFVP---YGQ--PDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDF 443
++ + + VP YG P+ + S+N +V ++ D V +TI + R + +DF
Sbjct: 466 QVGFQYKIELVPDNMYGVYIPE---TNSWNGIVQELMERRADLAVASMTINYARESVIDF 522
Query: 444 TLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLEHRVNEDF 503
T P+ G+ ++ + S+ + F+ PL ++W+ +V+ ++
Sbjct: 523 TKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEW 582
Query: 504 RGP----------AGQ-QVGTSFWFSFSTMVFSQRERVISNLA---RIVVIVWCFVVLIL 549
+ P Q + SFWF T F ++ ++ A RIV W F LI+
Sbjct: 583 KNPHPCYKETDIVENQFSISNSFWFITGT--FLRQGSGLNPKATSTRIVGGCWFFFCLII 640
Query: 550 TQSY 553
SY
Sbjct: 641 ISSY 644
Score = 64 (27.6 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 255 NGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAFEIINVNNGA-RGVGFWTPEKG 307
+G L +++ GLTG FV+G+ +I+ + + VG+W P+ G
Sbjct: 355 DGISLYNQINAAITDGLTGTVQFVEGRRNIFKLDILKLKQEKIQKVGYWHPDDG 408
>FB|FBgn0010399 [details] [associations]
symbol:Nmdar1 "NMDA receptor 1" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA;NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IGI;IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IPI] [GO:0007616
"long-term memory" evidence=IGI;IMP] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0008306 "associative learning" evidence=IDA]
[GO:0042331 "phototaxis" evidence=IDA] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0050975 "sensory
perception of touch" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0042331 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
GO:GO:0007476 GO:GO:0072375 InterPro:IPR001828 GO:GO:0055074
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
EMBL:X71790 EMBL:AY070577 PIR:S33754 RefSeq:NP_730940.1
UniGene:Dm.3670 HSSP:Q05586 ProteinModelPortal:Q24418 SMR:Q24418
STRING:Q24418 PRIDE:Q24418 EnsemblMetazoa:FBtr0078763 GeneID:40665
KEGG:dme:Dmel_CG2902 UCSC:CG2902-RA CTD:40665 FlyBase:FBgn0010399
HOGENOM:HOG000184780 InParanoid:Q24418 PhylomeDB:Q24418
GenomeRNAi:40665 NextBio:819920 Bgee:Q24418 Uniprot:Q24418
Length = 997
Score = 109 (43.4 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 59/291 (20%), Positives = 112/291 (38%)
Query: 425 DAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX 484
D +V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 485 XXXXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNL 534
++L+ R + D + ++ WF++ ++ S S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 535 ARIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRG--DNV--GYQKGSF 590
AR++ +VW +I+ SY ++ + R +N+ KGS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 591 V-LGILKQLGFDER-KLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKY 648
V + +Q+ + + N+ + Q G + A + ++ + C
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 762
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 698
E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 763 TAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGH 812
Score = 107 (42.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 41/197 (20%), Positives = 84/197 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDG----SSSGS------YNDLVYQVFLGEFDA 426
GYC+D+ + + + + P GQ +++G+ + L+ ++ D
Sbjct: 467 GYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNERADM 526
Query: 427 VVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXX 486
+V +TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 487 XXXXXXWVLEH-----RV---NEDFRGPAGQQVGTSFWFSFSTMVFSQ--RERVISNLAR 536
++L+ R + D + ++ WF++ ++ S S AR
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 645
Query: 537 IVVIVWCFVVLILTQSY 553
++ +VW +I+ SY
Sbjct: 646 VLGMVWAGFAMIIVASY 662
Score = 84 (34.6 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 46/198 (23%), Positives = 76/198 (38%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWTPEKGXXX 310
++G +L Q L S G TG F D G + +++IN+ + VG K
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVG-----KFSYD 386
Query: 311 XXXXXXXXXXXXXPIIWPGDSTSDPKGWEVPTNEKKLRIG----VPVKKGFSDFVNVTID 366
IIWPG P+G +PT+ + L I V V++ D D
Sbjct: 387 SMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPD 446
Query: 367 PK------TQEPTS----VTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSY---N 413
+ + T+ GYC+D+ + + + + YD PDG G Y N
Sbjct: 447 ERPCPLFNNSDATANEFCCRGYCIDLLIELSKRINFT--YDLAL--SPDGQF-GHYILRN 501
Query: 414 DLVYQVFLGEFDAVVGDI 431
+ E+ ++G++
Sbjct: 502 NTGAMTLRKEWTGLIGEL 519
Score = 76 (31.8 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 45 QAGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLAT-DDQ 103
QA ++ F + + + I+ + G ++ Q V R+ + + + +
Sbjct: 160 QADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPK 219
Query: 104 IE---KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 151
+E + L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 220 LESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>FB|FBgn0004619 [details] [associations]
symbol:GluRIA "Glutamate receptor IA" species:7227
"Drosophila melanogaster" [GO:0006812 "cation transport"
evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;NAS] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812
InterPro:IPR001828 EMBL:M97192 EMBL:BT003218 EMBL:BT050435
PIR:A46421 RefSeq:NP_476855.1 UniGene:Dm.6460
ProteinModelPortal:Q03445 SMR:Q03445 STRING:Q03445 PaxDb:Q03445
EnsemblMetazoa:FBtr0076982 GeneID:38742 KEGG:dme:Dmel_CG8442
CTD:38742 FlyBase:FBgn0004619 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 InParanoid:Q03445 KO:K05313
OMA:EWRIVRR OrthoDB:EOG4WM38M PhylomeDB:Q03445 GenomeRNAi:38742
NextBio:810146 Bgee:Q03445 GermOnline:CG8442 GO:GO:0008328
GO:GO:0004971 GO:GO:0005234 Uniprot:Q03445
Length = 991
Score = 117 (46.2 bits), Expect = 9.7e-09, Sum P(4) = 9.7e-09
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
GYC D+ + +L V YG + + G ++ +V ++ E D + +TI
Sbjct: 510 GYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVGELIRKEADIAISAMTI 569
Query: 434 VFNRSNYVDFTLPYTESGVSMIV--PIKDSKKRNAWVFLQPLTWDLWVT 480
R +DF+ P+ G+S+++ P+K + + FL PL+ ++W++
Sbjct: 570 TAERERVIDFSKPFMTLGISIMIKKPVKQTP--GVFSFLNPLSQEIWIS 616
Score = 104 (41.7 bits), Expect = 9.7e-09, Sum P(4) = 9.7e-09
Identities = 46/201 (22%), Positives = 78/201 (38%)
Query: 514 SFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITD 572
SFW+S + + + ++A RI VW F +IL SY I
Sbjct: 683 SFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKT 742
Query: 573 VKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNG---GIAA 629
+ L + D V Y G+ + G + F ++ ++N + Q SV+ GI
Sbjct: 743 PEDLTMQTD-VNY--GTLLYGSTWEF-FRRSQIGLHNKMWEYMNANQHHSVHTYDEGIRR 798
Query: 630 AFDEIPYMKLLIGQYCSKYAMIEP---------KFKTAGFGFVFPLHSPLVHDVSKAILN 680
LL+ ++Y P T GFG P+ SPL +++A+L
Sbjct: 799 VRQSKGKYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLRKRLNEAVLT 858
Query: 681 VTEGDKMKEIEDAWFKKHSSC 701
+ E ++ I + W+ + C
Sbjct: 859 LKENGELLRIRNKWWFDKTEC 879
Score = 52 (23.4 bits), Expect = 9.7e-09, Sum P(4) = 9.7e-09
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIF-VDGQLQSSAFEII--NVNNGARGVGFWTPEKG 307
+ G K+ + L GL+G+ F DG+ + ++ +VN+ + V W + G
Sbjct: 395 EQGEKISRVLRKVEIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAG 451
Score = 37 (18.1 bits), Expect = 9.7e-09, Sum P(4) = 9.7e-09
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 48 AITAIIKAFGWREAVPIYVDNQYG 71
AI I+ +GW+ + +Y D+ G
Sbjct: 158 AIIDTIQYYGWQSIIYLY-DSHDG 180
>RGD|2737 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, N-methyl D-aspartate
2A" species:10116 "Rattus norvegicus" [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0001964 "startle response"
evidence=ISO] [GO:0001975 "response to amphetamine" evidence=ISO]
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IMP]
[GO:0005261 "cation channel activity" evidence=ISO;IDA] [GO:0005262
"calcium channel activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007611 "learning or memory" evidence=ISO] [GO:0007612 "learning"
evidence=ISO] [GO:0007613 "memory" evidence=ISO;IDA] [GO:0008021
"synaptic vesicle" evidence=ISO] [GO:0008104 "protein localization"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISS;IDA]
[GO:0008542 "visual learning" evidence=ISO] [GO:0009416 "response to
light stimulus" evidence=IEP] [GO:0009611 "response to wounding"
evidence=ISO] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010042
"response to manganese ion" evidence=IEP] [GO:0010942 "positive
regulation of cell death" evidence=IDA] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016595
"glutamate binding" evidence=IDA;IMP] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IDA] [GO:0019233 "sensory perception of pain"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0021766
"hippocampus development" evidence=IEP] [GO:0021987 "cerebral cortex
development" evidence=IEP] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0022843 "voltage-gated cation channel activity" evidence=IMP]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0030431 "sleep"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0033058 "directional locomotion" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IDA] [GO:0035254
"glutamate receptor binding" evidence=IPI] [GO:0040011 "locomotion"
evidence=ISO] [GO:0042165 "neurotransmitter binding" evidence=IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=ISO] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0042417 "dopamine metabolic process" evidence=ISO] [GO:0042428
"serotonin metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP;ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;TAS]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045471
"response to ethanol" evidence=IEP;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IDA] [GO:0050804 "regulation of synaptic
transmission" evidence=ISO] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0051117 "ATPase binding" evidence=IPI]
[GO:0051262 "protein tetramerization" evidence=IDA] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0051930 "regulation of sensory perception of pain"
evidence=ISO] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=ISO;IMP] [GO:0060359
"response to ammonium ion" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0070588 "calcium ion transmembrane
transport" evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0071286 "cellular response to magnesium
ion" evidence=IEP] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:0071294 "cellular response to zinc ion"
evidence=IMP] [GO:0071359 "cellular response to dsRNA" evidence=IEP]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] [GO:0071396 "cellular response to lipid" evidence=IEP]
[GO:0097110 "scaffold protein binding" evidence=IPI] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=IDA] [GO:0050966 "detection of mechanical stimulus involved
in sensory perception of pain" evidence=ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2737 GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009986
GO:GO:0008104 GO:GO:0009611 GO:GO:0071363 GO:GO:0022008 GO:GO:0051592
GO:GO:0042493 GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008270 GO:GO:0008542 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043065 GO:GO:0009416 GO:GO:0010942 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0014075 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595 GO:GO:2000463
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 CTD:2903
HOVERGEN:HBG052635 KO:K05209 OrthoDB:EOG4X0MRG GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 EMBL:M91561
EMBL:D13211 EMBL:AF001423 IPI:IPI00326054 PIR:A43274
RefSeq:NP_036705.3 UniGene:Rn.9710 PDB:2A5S PDB:2A5T PDBsum:2A5S
PDBsum:2A5T ProteinModelPortal:Q00959 SMR:Q00959 DIP:DIP-34031N
IntAct:Q00959 MINT:MINT-93314 STRING:Q00959 TCDB:1.A.10.1.6
PhosphoSite:Q00959 PRIDE:Q00959 GeneID:24409 KEGG:rno:24409
UCSC:RGD:2737 InParanoid:Q00959 BindingDB:Q00959 ChEMBL:CHEMBL310
EvolutionaryTrace:Q00959 NextBio:603227 ArrayExpress:Q00959
Genevestigator:Q00959 GermOnline:ENSRNOG00000033942 Uniprot:Q00959
Length = 1464
Score = 155 (59.6 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 424 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 477
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 478 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 537
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 538 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 596
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 597 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 645
Score = 61 (26.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F + G+G SP + A+L +M+E+E W C + V S L
Sbjct: 756 FASTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 813
Query: 715 LNS 717
+++
Sbjct: 814 IDN 816
Score = 55 (24.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 32/166 (19%), Positives = 68/166 (40%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWRE-AVPIY 65
+ +++ +PIL + + + + P FF+ + QA + I++ + W ++
Sbjct: 116 ISSQTFIPILGIHGGASMIMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTT 175
Query: 66 VDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLP 125
+ Y + I + + ++VI+ L T + K +L + + V +L+
Sbjct: 176 IFPGY-RDFISFIKTTVDNSFVGWDMQNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSK 233
Query: 126 SLGSRIFEKANEIGLMNKGCVWI---MTDGMTNLLRTLEPSVIDSM 168
I +A +GL WI + G T L+ PS + S+
Sbjct: 234 DEAVLILSEARSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISV 279
Score = 46 (21.3 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 208 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 267
Query: 290 I 290
I
Sbjct: 268 I 268
>UNIPROTKB|F1MLZ9 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0051930 "regulation of sensory
perception of pain" evidence=IEA] [GO:0048167 "regulation of
synaptic plasticity" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042428 "serotonin metabolic process" evidence=IEA] [GO:0042417
"dopamine metabolic process" evidence=IEA] [GO:0042177 "negative
regulation of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0030431 "sleep"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0019233
"sensory perception of pain" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0009611 "response to
wounding" evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0048167
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0022008 GO:GO:0042493 GO:GO:0045471 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0008542
GO:GO:0060079 GO:GO:0042734 GO:GO:0001975 GO:GO:0030288
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 GO:GO:0042428
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972 OMA:CRSCLSN
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:DAAA02057431 IPI:IPI00715468
Ensembl:ENSBTAT00000010376 Uniprot:F1MLZ9
Length = 1091
Score = 155 (59.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 51 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 104
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 105 YLVTNGKHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 164
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 165 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 223
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 224 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 272
Score = 65 (27.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 383 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 440
Query: 715 LNS 717
+++
Sbjct: 441 IDN 443
>RGD|621705 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:10116 "Rattus norvegicus"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030594 "neurotransmitter receptor
activity" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=IDA] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051205 "protein insertion into membrane" evidence=ISO]
[GO:0051924 "regulation of calcium ion transport" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 140 (54.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 357 FSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGS----SSGSY 412
F+ VN ++ P+T GYC+D+ + + ++L A+DF Y DG G +
Sbjct: 460 FAALVNGSV-PRTLRRCCY-GYCIDLLERLAEDL----AFDFELYIVGDGKYGALRDGRW 513
Query: 413 NDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQP 472
LV + G V +I RS VDFT P+ + + ++V +D+ F+ P
Sbjct: 514 TGLVGDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRTRDTASPIG-AFMWP 572
Query: 473 LTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFS-TMVFSQR-ERV 530
L W +WV + E R P G+ GT F +S + + ++ R
Sbjct: 573 LHWSMWVGVFAALHLTALFLTLYEWRSPYGLT-PRGRNRGTVFSYSSALNLCYAILFGRT 631
Query: 531 ISN------LARIVVIVWCFVVLILTQSY 553
+S+ R ++ +W L++ SY
Sbjct: 632 VSSKTPKCPTGRFLMNLWAIFCLLVLSSY 660
Score = 63 (27.2 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 243 NATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 299
N DL+ G G L + L +T F+G TG ++V G Q S F++ ++ G
Sbjct: 322 NCDDLKTGGSEATGRTLARFLGNTSFQGRTGA-VWVTGSSQVHVSRHFKVWSLRRDPLGA 380
Query: 300 GFW 302
W
Sbjct: 381 PAW 383
Score = 62 (26.9 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 17/74 (22%), Positives = 30/74 (40%)
Query: 645 CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDA 704
C + +P F G+G P +SPL ++S+ I + + D W+K
Sbjct: 759 CKLLTVGKP-FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRV 817
Query: 705 STVVSSRSLGLNSF 718
V + +G+ F
Sbjct: 818 FAVTETLQMGVYHF 831
>UNIPROTKB|Q8VHN2 [details] [associations]
symbol:Grin3b "Glutamate receptor ionotropic, NMDA 3B"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 140 (54.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 357 FSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGS----SSGSY 412
F+ VN ++ P+T GYC+D+ + + ++L A+DF Y DG G +
Sbjct: 460 FAALVNGSV-PRTLRRCCY-GYCIDLLERLAEDL----AFDFELYIVGDGKYGALRDGRW 513
Query: 413 NDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQP 472
LV + G V +I RS VDFT P+ + + ++V +D+ F+ P
Sbjct: 514 TGLVGDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRTRDTASPIG-AFMWP 572
Query: 473 LTWDLWVTXXXXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSFWFSFS-TMVFSQR-ERV 530
L W +WV + E R P G+ GT F +S + + ++ R
Sbjct: 573 LHWSMWVGVFAALHLTALFLTLYEWRSPYGLT-PRGRNRGTVFSYSSALNLCYAILFGRT 631
Query: 531 ISN------LARIVVIVWCFVVLILTQSY 553
+S+ R ++ +W L++ SY
Sbjct: 632 VSSKTPKCPTGRFLMNLWAIFCLLVLSSY 660
Score = 63 (27.2 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 243 NATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 299
N DL+ G G L + L +T F+G TG ++V G Q S F++ ++ G
Sbjct: 322 NCDDLKTGGSEATGRTLARFLGNTSFQGRTGA-VWVTGSSQVHVSRHFKVWSLRRDPLGA 380
Query: 300 GFW 302
W
Sbjct: 381 PAW 383
Score = 62 (26.9 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 17/74 (22%), Positives = 30/74 (40%)
Query: 645 CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDA 704
C + +P F G+G P +SPL ++S+ I + + D W+K
Sbjct: 759 CKLLTVGKP-FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRV 817
Query: 705 STVVSSRSLGLNSF 718
V + +G+ F
Sbjct: 818 FAVTETLQMGVYHF 831
>UNIPROTKB|F5GZ52 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC006531 EMBL:AC007218 EMBL:AC022168
EMBL:AC026423 EMBL:AC133565 HGNC:HGNC:4585 InterPro:IPR018884
Pfam:PF10565 IPI:IPI01012161 ProteinModelPortal:F5GZ52 SMR:F5GZ52
Ensembl:ENST00000535259 UCSC:uc010uyn.2 ArrayExpress:F5GZ52
Bgee:F5GZ52 Uniprot:F5GZ52
Length = 1124
Score = 155 (59.6 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 267 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 320
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 321 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 380
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 381 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 439
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 440 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 488
Score = 65 (27.9 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 599 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 656
Query: 715 LNS 717
+++
Sbjct: 657 IDN 659
Score = 46 (21.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 51 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 110
Query: 290 I 290
I
Sbjct: 111 I 111
Score = 44 (20.5 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 92 RSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWI--- 148
++VI+ L T + K +L + + V +L+ I +A +GL WI
Sbjct: 44 QNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPS 102
Query: 149 MTDGMTNLLRTLEPSVIDSM 168
+ G T L+ PS + S+
Sbjct: 103 LVSGNTELIPKEFPSGLISV 122
>ZFIN|ZDB-GENE-060809-5 [details] [associations]
symbol:si:ch211-251b21.1 "si:ch211-251b21.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 ZFIN:ZDB-GENE-060809-5 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG241927
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HOVERGEN:HBG104989 OrthoDB:EOG43FGX0 EMBL:CU499311 IPI:IPI00482094
RefSeq:NP_001138274.1 UniGene:Dr.3211 Ensembl:ENSDART00000008778
Ensembl:ENSDART00000139096 GeneID:571720 KEGG:dre:571720
OMA:QEGNFAF NextBio:20890667 Uniprot:B8JLR6
Length = 458
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 71/349 (20%), Positives = 137/349 (39%)
Query: 373 TSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVG 429
+ + G+C+D+ A+ +L + V YG+ D SG++N ++ +V GE D V
Sbjct: 41 SELEGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTD--DSGNWNGMIGEVVRGEADIAVA 98
Query: 430 DITIVFNRSNYVDFTLPYTESGVSMIVPIKD--SKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+T+ R VD + P+ ++G+S I+ KD S L+ + ++W+
Sbjct: 99 PLTLTAQREAVVDMSKPFMQTGLSFIMR-KDLGSDDSQFLSLLKLFSTEMWMGVLVAYLL 157
Query: 488 XXXXXWVLEHRVNE-DFRGPAGQQ----VGTSFWFSFSTMVFS---QRERVISNLARIVV 539
+++ R++ ++ P + SFW++ + + +S R++
Sbjct: 158 TSICIFLVS-RISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKALSG--RVIT 214
Query: 540 IVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD-NVGYQKGSFVLGILKQL 598
+W L+L Y I + L + G K S K
Sbjct: 215 SIWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFFKNS 274
Query: 599 GFDERKLVVYNSPE------DCHELFQKGSVNGGIAAAFDEIPYMKLLIGQYCSKYAMIE 652
+ + E + E F++ G A + + + L + +YC+ E
Sbjct: 275 NNPTYHRIYEHIKEAQSYSLNAAEGFRRAQ-KGNYAFIGESVS-LDLAVARYCNLTRAPE 332
Query: 653 PKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC 701
G+ PL SPL+ ++S AIL ++E ++ W+ SSC
Sbjct: 333 I-IGMRGYSIAAPLGSPLIKNLSVAILRLSESGELDYFRSKWWA--SSC 378
>ZFIN|ZDB-GENE-070424-129 [details] [associations]
symbol:grin2aa "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, a" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-129
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HOVERGEN:HBG052635 OrthoDB:EOG4X0MRG
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
HOGENOM:HOG000113802 EMBL:CR954963 EMBL:BX908803 IPI:IPI00494319
Ensembl:ENSDART00000073979 Ensembl:ENSDART00000142141
Uniprot:F1QZC7
Length = 1460
Score = 154 (59.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 51/220 (23%), Positives = 96/220 (43%)
Query: 347 LRIGVPVKKGFSDFVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDG 406
+R VP +K D N T T G+C+D+ K + + + + V G+
Sbjct: 427 MRNSVPCRKHIKD--NTTEGGGTYIKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGK 484
Query: 407 SSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNA 466
+ +N +V +V + VG +TI RS +DF++P+ E+G+S++V + + +
Sbjct: 485 KINNVWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVS-RSNGTVSP 543
Query: 467 WVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAGQQ--VGTSFW 516
FL+P + +WV ++ E+ N + + P G +G + W
Sbjct: 544 SAFLEPFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVW 603
Query: 517 FSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+ +VF+ V + ++ +V VW F +I SY
Sbjct: 604 LLWG-LVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASY 642
Score = 68 (29.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 35/170 (20%), Positives = 73/170 (42%)
Query: 9 LGNKSQVPILSFSATSPSLTS---IRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIY 65
+ +++ +PIL S + + ++S +F G+ + +A + I++ + W I
Sbjct: 113 ISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGA-SIQQEALLMLNIMEEYDWH-VFSIV 170
Query: 66 VDNQYG-EEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHML 124
G ++ I L + + +I+ A D ++ +L +Q+ V +L+
Sbjct: 171 TSKFPGYQDFIAILKTTVDNSFVGWDLQHIITLDAVDGDSRTQI-QLKKVQSPVVLLYCS 229
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGV 174
+ I E+A +GL G +WI+ +T + P S G+I V
Sbjct: 230 KDEAAYILEEARSLGLTGFGYIWIVPS-LTTGNPEITPDTFPS--GMISV 276
>WB|WBGene00001616 [details] [associations]
symbol:glr-5 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080218 PIR:T25941 RefSeq:NP_505244.1
ProteinModelPortal:O01623 SMR:O01623 STRING:O01623
EnsemblMetazoa:ZC196.7 GeneID:179251 KEGG:cel:CELE_ZC196.7
UCSC:ZC196.7 CTD:179251 WormBase:ZC196.7 HOGENOM:HOG000016348
InParanoid:O01623 OMA:IFRERED NextBio:904564 ArrayExpress:O01623
Uniprot:O01623
Length = 932
Score = 163 (62.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 29/104 (27%), Positives = 59/104 (56%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQ--PDGSSSGSYNDLVYQVFLGEFDAVVGDITIV 434
G+C+D+ + ++L + V G+ D +GS++ ++ ++ GE + V +T+
Sbjct: 467 GFCIDLLAELSKDLGFTYTIHAVKDGKYGNDKYGNGSWDGMMGEILRGEAEMAVAPLTVN 526
Query: 435 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW 478
+ RS VDFT P+ G+S++ + D ++ + + FL PL+W +W
Sbjct: 527 YRRSEAVDFTKPFLSLGISILYKVPDDQQPDLFSFLNPLSWQIW 570
Score = 54 (24.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 254 QNGPKLLQALSSTRFKGLTGDYIFVDGQLQSSAF----EIINVNNGARGVGFWTP 304
Q+G L+ + GL+GD ++G S F +++ + +GFW P
Sbjct: 355 QHGRSLIDNIVHNDLHGLSGDLRRLNGHPLKSNFSMRIQLLGYSGRLDDIGFWEP 409
>UNIPROTKB|F1PXS6 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051930
"regulation of sensory perception of pain" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042428 "serotonin metabolic process"
evidence=IEA] [GO:0042417 "dopamine metabolic process"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0030431 "sleep" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0022008 GO:GO:0042493 GO:GO:0045471 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0008542
GO:GO:0060079 GO:GO:0042734 GO:GO:0001975 GO:GO:0030288
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828
GO:GO:0042428 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0004972 OMA:CRSCLSN GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03004548
Ensembl:ENSCAFT00000030136 Uniprot:F1PXS6
Length = 1307
Score = 155 (59.6 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 267 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 320
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 321 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 380
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 381 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 439
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 440 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 488
Score = 65 (27.9 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 599 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 656
Query: 715 LNS 717
+++
Sbjct: 657 IDN 659
Score = 46 (21.3 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 51 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 110
Query: 290 I 290
I
Sbjct: 111 I 111
Score = 44 (20.5 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 92 RSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWI--- 148
++VI+ L T + K +L + + V +L+ I +A +GL WI
Sbjct: 44 QNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPS 102
Query: 149 MTDGMTNLLRTLEPSVIDSM 168
+ G T L+ PS + S+
Sbjct: 103 LVSGNTELIPKEFPSGLISV 122
>UNIPROTKB|F1M3N1 [details] [associations]
symbol:Grin2a "Glutamate receptor ionotropic, NMDA 2A"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2737
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565 IPI:IPI00948725
ProteinModelPortal:F1M3N1 Ensembl:ENSRNOT00000067670
ArrayExpress:F1M3N1 Uniprot:F1M3N1
Length = 1327
Score = 155 (59.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 57/230 (24%), Positives = 102/230 (44%)
Query: 341 PTNEKKLRIGVPVKKGFSDFVNVTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAY 396
P E +R VP +K FV I+ T E +V G+C+D+ K + + + +
Sbjct: 287 PLTETCVRNTVPCRK----FVK--INNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDL 340
Query: 397 DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIV 456
V G+ + +N ++ +V VG +TI RS VDF++P+ E+G+S++V
Sbjct: 341 YLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMV 400
Query: 457 PIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAG 508
+ + + FL+P + +WV +V E+ N + + P G
Sbjct: 401 S-RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHG 459
Query: 509 QQ--VGTSFWFSFSTMVFSQRERVIS---NLARIVVIVWCFVVLILTQSY 553
+G + W + +VF+ V + ++I+V VW F +I SY
Sbjct: 460 PSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASY 508
Score = 65 (27.9 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 619 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 676
Query: 715 LNS 717
+++
Sbjct: 677 IDN 679
Score = 46 (21.3 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
TSF KT V + + + + LS R GLTG D+ ++ L S E+
Sbjct: 71 TSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPSLVSGNTEL 130
Query: 290 I 290
I
Sbjct: 131 I 131
Score = 44 (20.5 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 92 RSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWI--- 148
++VI+ L T + K +L + + V +L+ I +A +GL WI
Sbjct: 64 QNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPS 122
Query: 149 MTDGMTNLLRTLEPSVIDSM 168
+ G T L+ PS + S+
Sbjct: 123 LVSGNTELIPKEFPSGLISV 142
>UNIPROTKB|E9PH24 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC022317 EMBL:AC093596 EMBL:AC093733
EMBL:AC096769 EMBL:AC104077 EMBL:AC105315 EMBL:AC105452
EMBL:AC112695 EMBL:AC115111 HGNC:HGNC:4576 EMBL:AC020699
EMBL:AC095059 EMBL:AC108158 EMBL:AC110800 EMBL:AC115537
IPI:IPI00963845 ProteinModelPortal:E9PH24 SMR:E9PH24
Ensembl:ENST00000510992 UCSC:uc011cdu.2 ArrayExpress:E9PH24
Bgee:E9PH24 Uniprot:E9PH24
Length = 912
Score = 134 (52.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 51/217 (23%), Positives = 83/217 (38%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAV 427
+P G+ +DV A+ L + P YG P G++N LV ++ D
Sbjct: 368 KPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIG 425
Query: 428 VGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXX 487
+ +TI +R N VDFT Y + V +++ + K + + L P LW
Sbjct: 426 ISALTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLL 484
Query: 488 XXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVIVW 542
++L +N R G T S WF + + V E + LA R+++ W
Sbjct: 485 VGLLVYLLNW-LNPP-RLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAW 542
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKR 579
LI+ SY I ++ L K+
Sbjct: 543 WLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQ 579
Score = 82 (33.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 58/237 (24%), Positives = 94/237 (39%)
Query: 81 ALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGL 140
ALQ ++ + +I+ L +IE EL + + R IL M P+ + E L
Sbjct: 101 ALQKVENNI--NKMITTLFDTMRIE-ELNR-YRDTLRRAILVMNPATAKSFITEVVETNL 156
Query: 141 MNKGCVWIMTDGMTNLL--RTLEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQE 198
+ C WI+ + N + + L I + + P VP+ + FR + +
Sbjct: 157 VAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFP-VPQNISQRCFRGNHRISSTLC 215
Query: 199 NPSIVDVE-LNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGP 257
+P + + I L YD LA A K ++S + + + Q G
Sbjct: 216 DPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGR 272
Query: 258 KLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNNG---ARGV---GFWTPEKG 307
+L+ + GLTG+ F + G + FEI+ N G RGV G W P G
Sbjct: 273 SMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 329
>UNIPROTKB|P19439 [details] [associations]
symbol:KBP "Probable glutamate receptor" species:9031
"Gallus gallus" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 EMBL:X17700 IPI:IPI00597968 PIR:S07062
RefSeq:NP_990684.1 UniGene:Gga.42516 ProteinModelPortal:P19439
Ensembl:ENSGALT00000001776 GeneID:396300 KEGG:gga:396300
CTD:100002194 eggNOG:NOG241927 GeneTree:ENSGT00700000104113
HOGENOM:HOG000234371 HOVERGEN:HBG104989 InParanoid:P19439
OMA:YLRSKWW OrthoDB:EOG43FGX0 NextBio:20816350 Uniprot:P19439
Length = 487
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 71/353 (20%), Positives = 133/353 (37%)
Query: 366 DPKTQ-EPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDG-SSSGSYNDLVYQVFLGE 423
DP + GYC+D+ KA+ L ++ V G+ S SG++ ++ ++ E
Sbjct: 57 DPYVMVRSAELEGYCIDLLKALASMLHFSYKVKVVGDGKYGAISPSGNWTGMIGEILRQE 116
Query: 424 FDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKD-SKKRNAWVFLQPLTWDLWVTXX 482
D V +T+ R V FT P+ ++G+ +++ + S++ + + FL P + + W
Sbjct: 117 ADIAVAPLTVTSAREEVVSFTTPFLQTGIGILLRKETISQEMSFFHFLAPFSKETWTGLL 176
Query: 483 XXXXXXXXXXWVLEHRVNEDFRGPAGQQVGTSF----WFSFSTMVF---SQRERVISNLA 535
+++ ++ P ++ +F WF + + R + S
Sbjct: 177 FAYVLTCVCLFLVARLSPCEWNEPKNEENHFTFLNSLWFGAGALTLQGVTPRPKAFS--V 234
Query: 536 RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIK-RGDNVGYQKGSFVLGI 594
R++ +W + L +Y I + L+K R G GS
Sbjct: 235 RVIAAIWWLFTIALLAAYIANFTALLSSGSEQLSIQTFEDLVKQRKLEFGTLDGSSTFYF 294
Query: 595 LKQLGFDERKLVV-YNSPEDCHEL---FQKG--SVNGGIAAAFDEIPYMKLLIGQYCSKY 648
K ++V Y H L +Q+ V A E L ++C+
Sbjct: 295 FKNSKNPIHRMVYEYMDKRRDHVLVKTYQEAVQRVMESNYAFIGESISQDLAAARHCNLI 354
Query: 649 AMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC 701
E GFG SP +S A+L + E + + + W++ SSC
Sbjct: 355 RAPEV-IGARGFGIATAQASPWTKKLSVAVLKLRETGDLDYLRNKWWE--SSC 404
>UNIPROTKB|J9P9T9 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03006305
EMBL:AAEX03006306 Ensembl:ENSCAFT00000044880 Uniprot:J9P9T9
Length = 1180
Score = 163 (62.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +V+ D +G +TI
Sbjct: 455 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEE 514
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS VDF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 515 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFMF 573
Query: 496 EH----RVNEDFR-----GPAGQQVGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWC 543
E+ N++ G +G S W ++ +VF+ E ++I+V+VW
Sbjct: 574 EYFSPVSYNQNLTSGKKSGGPSFTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLVWA 632
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 633 FFAVIFLASY 642
Score = 54 (24.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 29/147 (19%), Positives = 59/147 (40%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSP--YFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S + + + P F + ++ Q + +++ + W A +
Sbjct: 111 ISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 169
Query: 67 DNQYGEEMIPSLTDALQAIDTR-VPYR--SVIS-PLATDDQIEKELYKLFTMQTRVFILH 122
G + L A D + +R V++ L Q L + V + +
Sbjct: 170 SLHPGHALF--LEGVRAAADASYLSWRLLDVLTLELGPGGQRAHTQRLLRQLDAPVLVAY 227
Query: 123 MLPSLGSRIFEKANEIGLMNKGCVWIM 149
+F +A + GL+ G VW++
Sbjct: 228 CSREEAEVLFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|Q16478 [details] [associations]
symbol:GRIK5 "Glutamate receptor ionotropic, kainate 5"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=IEA] [GO:0051649 "establishment of localization
in cell" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0071333
"cellular response to glucose stimulus" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0071333 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0043204 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0035249 EMBL:CH471126
DrugBank:DB00142 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CleanEx:HS_GRIK2 EMBL:S40369 EMBL:AJ249209 IPI:IPI00103335
IPI:IPI00293288 PIR:I57936 RefSeq:NP_002079.3 UniGene:Hs.367799
ProteinModelPortal:Q16478 SMR:Q16478 IntAct:Q16478
MINT:MINT-1427286 STRING:Q16478 PhosphoSite:Q16478 DMDM:209572626
PRIDE:Q16478 DNASU:2901 Ensembl:ENST00000262895
Ensembl:ENST00000301218 GeneID:2901 KEGG:hsa:2901 UCSC:uc002osi.1
CTD:2901 GeneCards:GC19M042502 H-InvDB:HIX0022359
H-InvDB:HIX0027521 HGNC:HGNC:4583 MIM:600283 neXtProt:NX_Q16478
PharmGKB:PA28977 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP
BindingDB:Q16478 ChEMBL:CHEMBL2675 GenomeRNAi:2901 NextBio:11483
Bgee:Q16478 CleanEx:HS_GRIK5 Genevestigator:Q16478
GermOnline:ENSG00000105737 GO:GO:0031630 Uniprot:Q16478
Length = 980
Score = 116 (45.9 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + + L + V YG P+ +GS+ +V ++ + D V TI
Sbjct: 445 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWL 548
Score = 78 (32.5 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 56/261 (21%), Positives = 95/261 (36%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXX 569
+G S WF + E + L+ R V VW LI+ SY
Sbjct: 592 LGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVP 651
Query: 570 ITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY----NSPEDCH-ELFQKGSVN 624
+ L + N+ Y G+ G F + Y N + +F K S
Sbjct: 652 VESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK-STE 706
Query: 625 GGIAAAFDEIPYMKLL---IGQY-----CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSK 676
GIA + Y LL + +Y C+ I T G+G PL SP +++
Sbjct: 707 EGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEITL 764
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXX 736
AIL + E ++++ ++ W++ CP ++ LG+ +
Sbjct: 765 AILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMENIGGIFIVLICGLIIAVFVA 822
Query: 737 MAVFIHQHWNVLKNSESSFLS 757
+ FI W+ +++ES +S
Sbjct: 823 VMEFI---WSTRRSAESEEVS 840
Score = 68 (29.0 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVG----PHVPKT 181
S+ I KA+E+G+ + +I+T +L L+ V DS ++G H
Sbjct: 221 SISHLILRKASELGMTSAFYKYILTTMDFPILH-LDGIVEDS-SNILGFSMFNTSHPFYP 278
Query: 182 KALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVS 241
+ + + + W+ N E + + L+ L +DA + AV + + + V
Sbjct: 279 EFVRSLNMSWRENC--EASTYLGPALS--AALMFDAVHVVVSAVRELNRSQ----EIGVK 330
Query: 242 RNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNN-GARGV 299
A + I +G L+ L + GLTG F GQ + I+ + G R +
Sbjct: 331 PLACT--SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREI 388
Query: 300 GFW 302
G W
Sbjct: 389 GVW 391
>UNIPROTKB|E2RG96 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTWRRIS
EMBL:AAEX03006305 EMBL:AAEX03006306 Ensembl:ENSCAFT00000007441
Uniprot:E2RG96
Length = 1220
Score = 163 (62.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +V+ D +G +TI
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEE 515
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS VDF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 516 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFMF 574
Query: 496 EH----RVNEDFR-----GPAGQQVGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWC 543
E+ N++ G +G S W ++ +VF+ E ++I+V+VW
Sbjct: 575 EYFSPVSYNQNLTSGKKSGGPSFTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLVWA 633
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 634 FFAVIFLASY 643
Score = 54 (24.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 29/147 (19%), Positives = 59/147 (40%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSP--YFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S + + + P F + ++ Q + +++ + W A +
Sbjct: 111 ISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 169
Query: 67 DNQYGEEMIPSLTDALQAIDTR-VPYR--SVIS-PLATDDQIEKELYKLFTMQTRVFILH 122
G + L A D + +R V++ L Q L + V + +
Sbjct: 170 SLHPGHALF--LEGVRAAADASYLSWRLLDVLTLELGPGGQRAHTQRLLRQLDAPVLVAY 227
Query: 123 MLPSLGSRIFEKANEIGLMNKGCVWIM 149
+F +A + GL+ G VW++
Sbjct: 228 CSREEAEVLFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|F1NAK2 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0030431 "sleep" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0042177 "negative
regulation of protein catabolic process" evidence=IEA] [GO:0042417
"dopamine metabolic process" evidence=IEA] [GO:0042428 "serotonin
metabolic process" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0051930
"regulation of sensory perception of pain" evidence=IEA]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0009986 GO:GO:0008104
GO:GO:0009611 GO:GO:0042493 GO:GO:0045471 GO:GO:0005262
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0042734 GO:GO:0001975 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828
GO:GO:0042428 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972 OMA:CRSCLSN
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:AADN02023472 IPI:IPI00599444
ProteinModelPortal:F1NAK2 Ensembl:ENSGALT00000011793 Uniprot:F1NAK2
Length = 1437
Score = 155 (59.6 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 363 VTIDPKTQEPTSVT----GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQ 418
V I+ T E T+V G+C+D+ K + + + + V G+ + +N ++ +
Sbjct: 416 VKINNSTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKKVNNVWNGMIGE 475
Query: 419 VFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW 478
V VG +TI RS VDF++P+ E+G+S++V + + + FL+P + +W
Sbjct: 476 VVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVS-RSNGTVSPSAFLEPFSASVW 534
Query: 479 VTXXXXXXXXXXXX-WVLEH----RVNEDF---RGPAGQQ--VGTSFWFSFSTMVFSQRE 528
V ++ E+ N + R P G +G + W + +VF+
Sbjct: 535 VMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGRDPHGPSFTIGKAVWLLWG-LVFNNSV 593
Query: 529 RVIS---NLARIVVIVWCFVVLILTQSY 553
V + ++I+V VW F +I SY
Sbjct: 594 PVQNPKGTTSKIMVSVWAFFAVIFLASY 621
Score = 65 (27.9 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLG 714
F T G+G SP + A+L +M+E+E W C + V S L
Sbjct: 732 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT--GICHNEKNEVMSSQLD 789
Query: 715 LNS 717
+++
Sbjct: 790 IDN 792
Score = 45 (20.9 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 231 TSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTG-DYIFVDGQLQSSAFEI 289
T+FG KT + + + + + L R GLTG D+ ++ L S EI
Sbjct: 184 TAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEARSLGLTGYDFFWIVPSLVSGNTEI 243
Score = 37 (18.1 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 29/149 (19%), Positives = 56/149 (37%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSPY--FFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ +PIL + + + + FF+ + +A + I++ + W V V
Sbjct: 92 ISSQTSIPILGIHGGASMIMADKDVMSTFFQFGASIQQEAIVMLKIMQDYDWH--VFSLV 149
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYRSV------ISPLATDDQIEKELYKLFTMQTRVFI 120
+ P D + I T V V I L T K +L + + V +
Sbjct: 150 TTTF-----PGYRDFINVIKTTVENSFVGWDMQNIIILDTAFGDAKTQIQLKKIHSSVIL 204
Query: 121 LHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
L+ I ++A +GL WI+
Sbjct: 205 LYCSKDEAVYILDEARSLGLTGYDFFWIV 233
>ZFIN|ZDB-GENE-070822-3 [details] [associations]
symbol:grin2ca "glutamate receptor, ionotropic,
N-methyl D-aspartate 2Ca" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-070822-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX546473 EMBL:CU464067
IPI:IPI00932733 RefSeq:XP_002661175.2 Ensembl:ENSDART00000110554
Ensembl:ENSDART00000145215 GeneID:100329743 KEGG:dre:100329743
Uniprot:E7FH62
Length = 1400
Score = 168 (64.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 47/190 (24%), Positives = 88/190 (46%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +VF D +G +TI
Sbjct: 466 GFCIDILKKLSRNIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEE 525
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS +DF++P+ E+G+S++V + + + FL+P + +WV +V
Sbjct: 526 RSEIIDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVF 584
Query: 496 EH-------RVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWC 543
E+ R + P G +G S W + +VF+ E ++I+V+VW
Sbjct: 585 EYCSPVGYNRSLVSAKDPGGPTFTIGKSVWLLWG-IVFNNSVPIENPKGTTSKIMVLVWA 643
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 644 FFAVIFLASY 653
Score = 49 (22.3 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 114 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+ +V +++ +F A E+GL+ G +W +
Sbjct: 229 IDAQVLLVYCSHDEAQYLFSMAREVGLVGPGYIWFI 264
>UNIPROTKB|Q38PU0 [details] [associations]
symbol:GRIK5 "KA2" species:9541 "Macaca fascicularis"
[GO:0005622 "intracellular" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0043197
GO:GO:0035235 GO:GO:0005622 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159937
ProteinModelPortal:Q38PU0 Uniprot:Q38PU0
Length = 891
Score = 116 (45.9 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + + L + V YG P+ +GS+ +V ++ + D V TI
Sbjct: 445 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWL 548
Score = 78 (32.5 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 56/261 (21%), Positives = 95/261 (36%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXX 569
+G S WF + E + L+ R V VW LI+ SY
Sbjct: 592 LGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVP 651
Query: 570 ITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY----NSPEDCH-ELFQKGSVN 624
+ L + N+ Y G+ G F + Y N + +F K S
Sbjct: 652 VESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK-STE 706
Query: 625 GGIAAAFDEIPYMKLL---IGQY-----CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSK 676
GIA + Y LL + +Y C+ I T G+G PL SP +++
Sbjct: 707 EGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEITL 764
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXX 736
AIL + E ++++ ++ W++ CP ++ LG+ +
Sbjct: 765 AILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMENIGGIFVVLICGLIIAVFVA 822
Query: 737 MAVFIHQHWNVLKNSESSFLS 757
+ FI W+ +++ES +S
Sbjct: 823 VMEFI---WSTRRSAESEEVS 840
Score = 65 (27.9 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 42/183 (22%), Positives = 73/183 (39%)
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVG----PHVPKT 181
S+ I KA+E+G+ + +I+T +L L+ V DS ++G H
Sbjct: 221 SISHLILRKASELGMTSAFYKYILTTMDFPILH-LDGIVEDS-SNILGFSMFNTSHPFYP 278
Query: 182 KALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVS 241
+ + + + W+ N E + L+ L +DA + AV + + + V
Sbjct: 279 EFVRSLNMSWRENC--EASTYPGPALS--AALMFDAVHVVVSAVRELNRSQ----EIGVK 330
Query: 242 RNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNN-GARGV 299
A + I +G L+ L + GLTG F GQ + I+ + G R +
Sbjct: 331 PLACT--SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREI 388
Query: 300 GFW 302
G W
Sbjct: 389 GVW 391
>UNIPROTKB|J9NV46 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03016479
Ensembl:ENSCAFT00000048687 Uniprot:J9NV46
Length = 849
Score = 153 (58.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 47/190 (24%), Positives = 78/190 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ + D V +TI +
Sbjct: 406 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 465
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 466 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 525
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 526 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 585
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 586 FFTLIIISSY 595
Score = 59 (25.8 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 59/295 (20%), Positives = 118/295 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 53 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAVLDLVLYYNWKTVTLVYEDST- 110
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 111 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 162
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 163 -GTAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 219
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 220 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 271
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
VS + + GP+ + + R+ GLTG F DG + +II++
Sbjct: 272 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISL 324
Score = 40 (19.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 16 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 49
Score = 37 (18.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 300 GLTGRITFNKTDGLRKDFDLDIISLKEEG 328
>UNIPROTKB|D4A2K9 [details] [associations]
symbol:Grin2c "Glutamate receptor ionotropic, NMDA 2C"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 IPI:IPI00201739 ProteinModelPortal:D4A2K9
Ensembl:ENSRNOT00000004502 ArrayExpress:D4A2K9 Uniprot:D4A2K9
Length = 1200
Score = 168 (64.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 46/190 (24%), Positives = 92/190 (48%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +V+ D +G +TI
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS +DF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 516 RSEIIDFSVPFVETGISVMVS-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMF 574
Query: 496 EH----RVNEDF-RG--PAGQQ--VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWC 543
E+ N++ +G P G +G S W ++ +VF+ E ++I+V+VW
Sbjct: 575 EYFSPVSYNQNLTKGKKPGGPSFTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLVWA 633
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 634 FFAVIFLASY 643
Score = 47 (21.6 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 27/146 (18%), Positives = 60/146 (41%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSP--YFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S + + + P F + ++ Q + +++ + W A +
Sbjct: 111 VSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 169
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYR--SVIS-PLATDDQIEKELYKLFTMQTRVFILHM 123
G + A+ A + + +R V++ L + L + V + +
Sbjct: 170 SLHPGHALFLEGVRAV-ADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYC 228
Query: 124 LPSLGSRIFEKANEIGLMNKGCVWIM 149
+F +A + GL+ G VW++
Sbjct: 229 SREEAEVLFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|F1P9T1 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AAEX03016479
Ensembl:ENSCAFT00000013975 Uniprot:F1P9T1
Length = 879
Score = 153 (58.9 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 47/190 (24%), Positives = 78/190 (41%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ + D V +TI +
Sbjct: 438 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 497
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 498 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 557
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 558 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 617
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 618 FFTLIIISSY 627
Score = 59 (25.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 59/295 (20%), Positives = 118/295 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 85 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAVLDLVLYYNWKTVTLVYEDST- 142
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 143 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 194
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 195 -GTAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 251
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 252 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 303
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
VS + + GP+ + + R+ GLTG F DG + +II++
Sbjct: 304 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISL 356
Score = 40 (19.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 48 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 81
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 332 GLTGRITFNKTDGLRKDFDLDIISLKEEG 360
>RGD|2739 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, N-methyl D-aspartate
2C" species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0009611 "response to wounding"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0033058 "directional locomotion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO;IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0030288 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905 HOVERGEN:HBG052636
KO:K05211 OrthoDB:EOG42RD6M EMBL:M91563 EMBL:D13212 IPI:IPI00326555
RefSeq:NP_036707.3 UniGene:Rn.9709 ProteinModelPortal:Q00961
SMR:Q00961 IntAct:Q00961 MINT:MINT-87425 STRING:Q00961
PhosphoSite:Q00961 PRIDE:Q00961 Ensembl:ENSRNOT00000004477
GeneID:24411 KEGG:rno:24411 InParanoid:Q00961 BindingDB:Q00961
ChEMBL:CHEMBL401 NextBio:603235 ArrayExpress:Q00961
Genevestigator:Q00961 GermOnline:ENSRNOG00000003280 Uniprot:Q00961
Length = 1237
Score = 168 (64.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 46/190 (24%), Positives = 92/190 (48%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +V+ D +G +TI
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS +DF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 516 RSEIIDFSVPFVETGISVMVS-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMF 574
Query: 496 EH----RVNEDF-RG--PAGQQ--VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWC 543
E+ N++ +G P G +G S W ++ +VF+ E ++I+V+VW
Sbjct: 575 EYFSPVSYNQNLTKGKKPGGPSFTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLVWA 633
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 634 FFAVIFLASY 643
Score = 47 (21.6 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 27/146 (18%), Positives = 60/146 (41%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSP--YFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S + + + P F + ++ Q + +++ + W A +
Sbjct: 111 VSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 169
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYR--SVIS-PLATDDQIEKELYKLFTMQTRVFILHM 123
G + A+ A + + +R V++ L + L + V + +
Sbjct: 170 SLHPGHALFLEGVRAV-ADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYC 228
Query: 124 LPSLGSRIFEKANEIGLMNKGCVWIM 149
+F +A + GL+ G VW++
Sbjct: 229 SREEAEVLFAEAAQAGLVGPGHVWLV 254
>ZFIN|ZDB-GENE-030131-6502 [details] [associations]
symbol:grik1a "glutamate receptor, ionotropic,
kainate 1a" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-6502 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 KO:K05201
GeneTree:ENSGT00590000083056 EMBL:AL837524 EMBL:CT573197
EMBL:AL954816 IPI:IPI00611951 RefSeq:XP_001924038.3
UniGene:Dr.14817 UniGene:Dr.155893 ProteinModelPortal:E9QGN5
Ensembl:ENSDART00000147089 GeneID:798001 KEGG:dre:798001 CTD:798001
NextBio:20933239 ArrayExpress:E9QGN5 Bgee:E9QGN5 Uniprot:E9QGN5
Length = 904
Score = 142 (55.0 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 44/190 (23%), Positives = 81/190 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + V G+ + G +N +V ++ D V +TI +
Sbjct: 462 GYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITY 521
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVL 495
R +DF+ P+ G+S++ + + FL PLT D+W+ +V+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFVI 581
Query: 496 EHRVNEDFRGP-----AGQQVGTSF------WFSFSTMVFSQRERVISNLA-RIVVIVWC 543
++ P + + V +F WF + ++ E + L+ RI+ +W
Sbjct: 582 ARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGGIWW 641
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 642 FFTLIIISSY 651
Score = 58 (25.5 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 256 GPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINVN-NGARGVGFWTPEKG 307
GP+ + ++ GLTG + DG + ++I++ +G +G W G
Sbjct: 359 GPRFMNLFKEAQWDGLTGRIVLNKTDGLRKEFNLDLISLKEDGTAKIGVWNSYTG 413
Score = 57 (25.1 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ +S + AI I+ + W+ +Y D+
Sbjct: 126 NALEVPHIQTRWKHPSVDN-KDNFYINLYPEYTSISRAILDIVIFYKWKCVTVVYEDST- 183
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLF--TMQTRVFILH 122
G + L A + ++ R + S PL + + EKE Y +F + Q +L
Sbjct: 184 GLMRMQELIKAPSKNNLKIRIRQLPSGGGDSRPLLKEMKKEKEFYVIFDCSYQVAAELLK 243
Query: 123 MLPSLG 128
L S+G
Sbjct: 244 QLMSMG 249
>TIGR_CMR|SPO_3335 [details] [associations]
symbol:SPO_3335 "glutamine ABC transporter, periplasmic
glutamine-binding protein" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0006868 "glutamine transport" evidence=ISS] [GO:0015186
"L-glutamine transmembrane transporter activity" evidence=ISS]
[GO:0016597 "amino acid binding" evidence=ISS] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00062 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0035235 GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 KO:K02030
RefSeq:YP_168531.1 ProteinModelPortal:Q5LN77 GeneID:3194025
KEGG:sil:SPO3335 PATRIC:23380121 HOGENOM:HOG000123673 OMA:LIWLAER
ProtClustDB:CLSK751639 Uniprot:Q5LN77
Length = 361
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 63/294 (21%), Positives = 114/294 (38%)
Query: 412 YNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 471
++D++ V GE D + +I+I R +DF+ P ESG+ ++VP + + + L
Sbjct: 79 FSDMLAAVMDGEADMAIANISITAARETEMDFSQPIFESGLQILVPAETNAGSSLLRAL- 137
Query: 472 PLTWDLWVTXXXXXXXXXXXX---WVLEHRVNEDFRGPAGQQVGTSFWFSFSTMVFSQRE 528
L+ DL++ W E R F + SFW++ + +V E
Sbjct: 138 -LSRDLFLAIGAAFVILLTGGMLMWYFERRAQPYFDRKLHEAWFPSFWWALNLVVNGGFE 196
Query: 529 RVISNLA--RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQ 586
+ A R+ ++ L + + + V L G VG
Sbjct: 197 ERVPRTAFGRLFGVLLVISSLFVVSVFTARITSVMTVEAISGSVNSVNDLY--GQEVGTI 254
Query: 587 KGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAFDEIPYMKLLIG-QYC 645
GS G L + D ++ ++ F++G+++ A FD P + Q
Sbjct: 255 DGSTAAGFLTRRDID---FAAFSDLQEMITAFERGALD---AIVFDA-PILSYYASHQGK 307
Query: 646 SKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHS 699
K F +G FP S V +V++A+L + E +E+ WF + +
Sbjct: 308 GKAVTTGAIFLRENYGIAFPTGSARVEEVNQALLALREDGTYEELYRKWFGRRN 361
>UNIPROTKB|J9P242 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2901 KO:K05205 OMA:NINSVME EMBL:AAEX03000923
RefSeq:XP_541594.4 Ensembl:ENSCAFT00000043369 GeneID:484480
KEGG:cfa:484480 Uniprot:J9P242
Length = 980
Score = 116 (45.9 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + + L + V YG P+ +GS+ +V ++ + D V TI
Sbjct: 445 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWL 548
Score = 78 (32.5 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 56/261 (21%), Positives = 95/261 (36%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXX 569
+G S WF + E + L+ R V VW LI+ SY
Sbjct: 592 LGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVP 651
Query: 570 ITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY----NSPEDCH-ELFQKGSVN 624
+ L + N+ Y G+ G F + Y N + +F K S
Sbjct: 652 VESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK-STE 706
Query: 625 GGIAAAFDEIPYMKLL---IGQY-----CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSK 676
GIA + Y LL + +Y C+ I T G+G PL SP +++
Sbjct: 707 EGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEITL 764
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXX 736
AIL + E ++++ ++ W++ CP ++ LG+ +
Sbjct: 765 AILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMENIGGIFVVLICGLIIAVFVA 822
Query: 737 MAVFIHQHWNVLKNSESSFLS 757
+ FI W+ +++ES +S
Sbjct: 823 VMEFI---WSTRRSAESEEVS 840
Score = 65 (27.9 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 39/183 (21%), Positives = 73/183 (39%)
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVG----PHVPKT 181
S+ I KA+E+G+ + +I+T +L L+ +++ ++G H
Sbjct: 221 SISHLILRKASELGMTSAFYKYILTTMDFPILH-LD-GIVEDTSNILGFSMFNTSHPFYP 278
Query: 182 KALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVS 241
+ + + + W+ N E + L+ L +DA + AV + + + V
Sbjct: 279 EFVRSLNMSWRENC--EASTYPGPALS--AALMFDAVHVVVSAVRELNRSQ----EIGVK 330
Query: 242 RNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNN-GARGV 299
A + I +G L+ L + GLTG F GQ + I+ + G R +
Sbjct: 331 PLACT--SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREI 388
Query: 300 GFW 302
G W
Sbjct: 389 GVW 391
>MGI|MGI:95818 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5 (gamma
2)" species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0008066 "glutamate receptor
activity" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IGI] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IMP] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IGI] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043113 "receptor clustering" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] [GO:0051649
"establishment of localization in cell" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95818 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0060079 GO:GO:0042734
GO:GO:0035249 InterPro:IPR001828 EMBL:CH466593 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2901 KO:K05205
OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630 EMBL:D10011
EMBL:AC125468 IPI:IPI00123538 PIR:JH0589 RefSeq:NP_032194.2
UniGene:Mm.2879 ProteinModelPortal:Q61626 IntAct:Q61626
STRING:Q61626 PhosphoSite:Q61626 PaxDb:Q61626 PRIDE:Q61626
Ensembl:ENSMUST00000003468 GeneID:14809 KEGG:mmu:14809
InParanoid:Q61626 ChiTaRS:GRIK5 NextBio:286991
Genevestigator:Q61626 GermOnline:ENSMUSG00000003378 Uniprot:Q61626
Length = 979
Score = 116 (45.9 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + + L + V YG P+ +GS+ +V ++ + D V TI
Sbjct: 445 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWL 548
Score = 78 (32.5 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 56/261 (21%), Positives = 95/261 (36%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXX 569
+G S WF + E + L+ R V VW LI+ SY
Sbjct: 592 LGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVP 651
Query: 570 ITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY----NSPEDCH-ELFQKGSVN 624
+ L + N+ Y G+ G F + Y N + +F K S
Sbjct: 652 VESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK-STE 706
Query: 625 GGIAAAFDEIPYMKLL---IGQY-----CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSK 676
GIA + Y LL + +Y C+ I T G+G PL SP +++
Sbjct: 707 EGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEITL 764
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXX 736
AIL + E ++++ ++ W++ CP ++ LG+ +
Sbjct: 765 AILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMENIGGIFVVLICGLIIAVFVA 822
Query: 737 MAVFIHQHWNVLKNSESSFLS 757
+ FI W+ +++ES +S
Sbjct: 823 VMEFI---WSTRRSAESEEVS 840
Score = 64 (27.6 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 41/183 (22%), Positives = 73/183 (39%)
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVG----PHVPKT 181
S+ + KA+E+G+ + +I+T +L L+ V DS ++G H
Sbjct: 221 SISHLVLRKASELGMTSAFYKYILTTMDFPILH-LDGIVEDS-SNILGFSMFNTSHPFYP 278
Query: 182 KALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVS 241
+ + + + W+ N E + L+ L +DA + AV + + + V
Sbjct: 279 EFVRSLNMSWRENC--EASTYPGPALS--AALMFDAVHVVVSAVRELNRSQ----EIGVK 330
Query: 242 RNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNN-GARGV 299
A + I +G L+ L + GLTG F GQ + I+ + G R +
Sbjct: 331 PLACT--SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREI 388
Query: 300 GFW 302
G W
Sbjct: 389 GVW 391
>RGD|2735 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006621 "protein
retention in ER lumen" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IDA] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0017124
"SH3 domain binding" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISO] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=IEA;ISO] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
[GO:0051649 "establishment of localization in cell" evidence=IMP]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2735 GO:GO:0014069
GO:GO:0043525 GO:GO:0071333 GO:GO:0017124 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0035249 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 GO:GO:0032983 PDB:3QLU PDB:3QLV PDBsum:3QLU PDBsum:3QLV
CTD:2901 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630
EMBL:Z11581 EMBL:U08258 IPI:IPI00207006 PIR:JH0592 RefSeq:NP_113696.1
UniGene:Rn.74042 PDB:3OM0 PDB:3OM1 PDBsum:3OM0 PDBsum:3OM1
ProteinModelPortal:Q63273 SMR:Q63273 STRING:Q63273 PhosphoSite:Q63273
PRIDE:Q63273 Ensembl:ENSRNOT00000027578 GeneID:24407 KEGG:rno:24407
UCSC:RGD:2735 InParanoid:Q63273 BindingDB:Q63273 ChEMBL:CHEMBL4041
NextBio:603217 Genevestigator:Q63273 GermOnline:ENSRNOG00000020310
Uniprot:Q63273
Length = 979
Score = 116 (45.9 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + + L + V YG P+ +GS+ +V ++ + D V TI
Sbjct: 445 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 502
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWL 548
Score = 78 (32.5 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 56/261 (21%), Positives = 95/261 (36%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXX 569
+G S WF + E + L+ R V VW LI+ SY
Sbjct: 592 LGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVP 651
Query: 570 ITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY----NSPEDCH-ELFQKGSVN 624
+ L + N+ Y G+ G F + Y N + +F K S
Sbjct: 652 VESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK-STE 706
Query: 625 GGIAAAFDEIPYMKLL---IGQY-----CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSK 676
GIA + Y LL + +Y C+ I T G+G PL SP +++
Sbjct: 707 EGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEITL 764
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXX 736
AIL + E ++++ ++ W++ CP ++ LG+ +
Sbjct: 765 AILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMENIGGIFVVLICGLIIAVFVA 822
Query: 737 MAVFIHQHWNVLKNSESSFLS 757
+ FI W+ +++ES +S
Sbjct: 823 VMEFI---WSTRRSAESEEVS 840
Score = 64 (27.6 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 41/183 (22%), Positives = 73/183 (39%)
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVG----PHVPKT 181
S+ + KA+E+G+ + +I+T +L L+ V DS ++G H
Sbjct: 221 SISHLVLRKASELGMTSAFYKYILTTMDFPILH-LDGIVEDS-SNILGFSMFNTSHPFYP 278
Query: 182 KALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVS 241
+ + + + W+ N E + L+ L +DA + AV + + + V
Sbjct: 279 EFVRSLNMSWRENC--EASTYPGPALS--AALMFDAVHVVVSAVRELNRSQ----EIGVK 330
Query: 242 RNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNN-GARGV 299
A + I +G L+ L + GLTG F GQ + I+ + G R +
Sbjct: 331 PLACT--SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREI 388
Query: 300 GFW 302
G W
Sbjct: 389 GVW 391
>MGI|MGI:2150393 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic, NMDA3B"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=ISO] [GO:0005262
"calcium channel activity" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IMP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030594 "neurotransmitter
receptor activity" evidence=ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA;ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=IMP;IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051205
"protein insertion into membrane" evidence=IMP] [GO:0051924
"regulation of calcium ion transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:2150393 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051924
GO:GO:0030288 GO:GO:0005261 GO:GO:0051205 GO:GO:0070588
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 GeneTree:ENSGT00700000104113 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 CTD:116444 KO:K05214
OMA:HLQLDWA EMBL:AF396649 EMBL:AY062435 EMBL:AF373861
IPI:IPI00131433 RefSeq:NP_569722.1 UniGene:Mm.391566
ProteinModelPortal:Q91ZU9 SMR:Q91ZU9 STRING:Q91ZU9
PhosphoSite:Q91ZU9 PRIDE:Q91ZU9 DNASU:170483
Ensembl:ENSMUST00000045085 GeneID:170483 KEGG:mmu:170483
UCSC:uc007gau.1 InParanoid:Q91ZU9 BindingDB:Q91ZU9
ChEMBL:CHEMBL2557 NextBio:370111 Bgee:Q91ZU9 CleanEx:MM_GRIN3B
Genevestigator:Q91ZU9 GermOnline:ENSMUSG00000035745 Uniprot:Q91ZU9
Length = 1003
Score = 135 (52.6 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGS----SSGSYNDLVYQVFLGEFDAVVGDIT 432
GYC+D+ + + ++L A+DF Y DG G + LV + G V +
Sbjct: 478 GYCIDLLERLAEDL----AFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFS 533
Query: 433 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXX 492
I RS VDFT P+ + + ++V +D+ F+ PL W +WV
Sbjct: 534 INSARSQVVDFTSPFFSTSLGIMVRTRDTASPIG-AFMWPLHWSMWVGVFAALHLTALFL 592
Query: 493 WVLEHRVNEDFRGPAGQQVGTSFWFSFS-TMVFSQR-ERVISN------LARIVVIVWCF 544
+ E R P G+ GT F +S + + ++ R +S+ R ++ +W
Sbjct: 593 TLYEWRSPYGLT-PRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAI 651
Query: 545 VVLILTQSY 553
L++ SY
Sbjct: 652 FCLLVLSSY 660
Score = 61 (26.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 645 CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK 696
C + +P F G+G P +SPL ++S+ I + + D W+K
Sbjct: 759 CKLLTVGKP-FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYK 809
Score = 61 (26.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 243 NATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 299
N DL+ G L + LS+T F+G TG ++V G Q S F++ ++ G
Sbjct: 322 NCEDLKTGGSESTARTLARFLSNTSFQGRTGA-VWVAGSSQVHVSRHFKVWSLRRDPLGA 380
Query: 300 GFW 302
W
Sbjct: 381 PAW 383
>UNIPROTKB|H7BYG7 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 ProteinModelPortal:H7BYG7
SMR:H7BYG7 Ensembl:ENST00000389124 Bgee:H7BYG7 Uniprot:H7BYG7
Length = 871
Score = 152 (58.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 657 FFTLIIISSY 666
Score = 57 (25.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 59/295 (20%), Positives = 118/295 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + AI ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 233
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 234 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 290
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 291 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 342
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
VS + + GP+ + + R+ GLTG F +G + +II++
Sbjct: 343 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KTN R DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
Score = 40 (19.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
>UNIPROTKB|P39086 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0014054 "positive
regulation of gamma-aminobutyric acid secretion" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IDA] [GO:0051966 "regulation of
synaptic transmission, glutamatergic" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0048266 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0032230 GO:GO:0060080 GO:GO:0007417
GO:GO:0035249 DrugBank:DB00142 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 DrugBank:DB00273 GO:GO:0051966 GO:GO:0016595
eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:L19058
EMBL:U16125 EMBL:AJ249208 IPI:IPI00783047 IPI:IPI00937051
PIR:I58178 RefSeq:NP_000821.1 RefSeq:NP_783300.1 UniGene:Hs.664641
PDB:2ZNS PDB:2ZNT PDB:2ZNU PDB:3FUZ PDB:3FV1 PDB:3FV2 PDB:3FVG
PDB:3FVK PDB:3FVN PDB:3FVO PDBsum:2ZNS PDBsum:2ZNT PDBsum:2ZNU
PDBsum:3FUZ PDBsum:3FV1 PDBsum:3FV2 PDBsum:3FVG PDBsum:3FVK
PDBsum:3FVN PDBsum:3FVO ProteinModelPortal:P39086 SMR:P39086
STRING:P39086 PhosphoSite:P39086 DMDM:729597 PaxDb:P39086
PRIDE:P39086 DNASU:2897 Ensembl:ENST00000389125
Ensembl:ENST00000399907 GeneID:2897 KEGG:hsa:2897 UCSC:uc002ynn.3
UCSC:uc002yno.1 CTD:2897 GeneCards:GC21M030909 HGNC:HGNC:4579
MIM:138245 neXtProt:NX_P39086 PharmGKB:PA28973 KO:K05201
BindingDB:P39086 ChEMBL:CHEMBL1918 EvolutionaryTrace:P39086
GenomeRNAi:2897 NextBio:11463 ArrayExpress:P39086 Bgee:P39086
CleanEx:HS_GRIK1 Genevestigator:P39086 GermOnline:ENSG00000171189
GO:GO:0022843 Uniprot:P39086
Length = 918
Score = 152 (58.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 657 FFTLIIISSY 666
Score = 57 (25.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 59/295 (20%), Positives = 118/295 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + AI ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 233
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 234 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 290
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 291 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 342
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
VS + + GP+ + + R+ GLTG F +G + +II++
Sbjct: 343 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KTN R DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
Score = 40 (19.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
>UNIPROTKB|E9PD61 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792018
ProteinModelPortal:E9PD61 SMR:E9PD61 Ensembl:ENST00000399913
UCSC:uc011acs.2 ArrayExpress:E9PD61 Bgee:E9PD61 Uniprot:E9PD61
Length = 920
Score = 152 (58.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 657 FFTLIIISSY 666
Score = 57 (25.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 59/295 (20%), Positives = 118/295 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + + ++ + ++ + AI ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN-KDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDST- 181
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 182 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 233
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 234 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 290
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 291 -SSIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 342
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
VS + + GP+ + + R+ GLTG F +G + +II++
Sbjct: 343 VS--SLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KTN R DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
Score = 40 (19.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
>FB|FBgn0028422 [details] [associations]
symbol:GluRIID "Glutamate receptor IID" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS;IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA;IC;ISS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0043179
"rhythmic excitation" evidence=IMP] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:1900073 "regulation of neuromuscular
synaptic transmission" evidence=IC] [GO:0045211 "postsynaptic
membrane" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0007274 InterPro:IPR001828 GO:GO:0043179
GeneTree:ENSGT00590000082809 KO:K05313 GO:GO:0005234 OMA:IRFSENE
GO:GO:0015277 HSSP:P19491 EMBL:AY768536 EMBL:AY768537 EMBL:AJ251888
EMBL:AJ251889 RefSeq:NP_651982.1 UniGene:Dm.3353 SMR:Q9TVI0
STRING:Q9TVI0 EnsemblMetazoa:FBtr0083938 GeneID:44483
KEGG:dme:Dmel_CG18039 UCSC:CG18039-RA CTD:44483 FlyBase:FBgn0028422
InParanoid:Q9TVI0 OrthoDB:EOG4Z613H GenomeRNAi:44483 NextBio:837310
Uniprot:Q9TVI0
Length = 902
Score = 139 (54.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 48/227 (21%), Positives = 91/227 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAY-----DFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDI 431
GY VD+ K + +L + + D+ + + S+SG ++V G D + D+
Sbjct: 449 GYGVDLIKELADKLGFNFTFRDGGNDYGSFNKTTNSTSGMLKEIVE----GRADLAITDL 504
Query: 432 TIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNA-WVFLQPLTWDLWVTXXXXXXXXXX 490
TI R +DF++P+ G++++ +K K A + F+ P + ++W+
Sbjct: 505 TITSEREEVIDFSIPFMNLGIAILY-VKPQKAPPALFSFMDPFSSEVWLYLGIAYLGVSL 563
Query: 491 XXWVLEHR--VNEDFRGPAGQQ---------VGTSFWFSFSTMVFSQRERVISNLA-RIV 538
+++ + D P ++ + S WF+ ++ E L+ R +
Sbjct: 564 CFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLWFTTGALLQQGSEIAPKALSTRTI 623
Query: 539 VIVWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGY 585
+W F LI+ SY I VK L D+V Y
Sbjct: 624 SAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQY 670
Score = 70 (29.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 50/268 (18%), Positives = 108/268 (40%)
Query: 46 AGAITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVIS-PLATDDQI 104
A A+ I+ F W + Y +Y + L + + P V+ L +
Sbjct: 143 ANALYDIVNQFEWSRFIFCYESAEY----LKILDHLMTRYGIKGPVIKVMRYDLNLNGNY 198
Query: 105 EKELYKLFTMQ-TRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPS 163
+ L ++ + +R+ ++ + + + +A ++G+MN+ +I+ G NL T +
Sbjct: 199 KSVLRRIRKSEDSRIVVVGSTTGV-AELLRQAQQVGIMNEDYTYII--GNLNL-HTFDLE 254
Query: 164 VID-SMQGVIGVGPHVPKTKALENFRVRWKRNFLQENP-SIVDVELNIFGLLAYDATRAL 221
S + G+ P + + + + + + P + + + L YDA R +
Sbjct: 255 EYKYSEANITGIRMFSPDQEEVRDLMEKLHQELGESEPVNSGSTFITMEMALTYDAVRVI 314
Query: 222 AEAVEKAGITSFGFDKTNVSRNATDLEAFGIS-QNGPKLLQALSSTRFKGLTGDYIFVDG 280
AE + + N S +++ G + +N + L+ T +TG I+ +G
Sbjct: 315 AETTKHL---PYQPQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKT----ITGR-IYFEG 366
Query: 281 QLQSS-AFEIINVN-NGARGVGFWTPEK 306
++ F++I + +G VG W K
Sbjct: 367 NVRKGFTFDVIELQTSGLVKVGTWEEGK 394
>UNIPROTKB|O60391 [details] [associations]
symbol:GRIN3B "Glutamate receptor ionotropic, NMDA 3B"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISS;NAS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0005261 "cation channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
[GO:0042165 "neurotransmitter binding" evidence=ISS] [GO:0005262
"calcium channel activity" evidence=ISS] [GO:0043025 "neuronal cell
body" evidence=ISS] [GO:0051205 "protein insertion into membrane"
evidence=ISS] [GO:0051924 "regulation of calcium ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261
DrugBank:DB00145 GO:GO:0051205 EMBL:AC004528 DrugBank:DB01173
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 EMBL:BK000070 EMBL:BK004079 IPI:IPI00297677
RefSeq:NP_619635.1 UniGene:Hs.660378 ProteinModelPortal:O60391
SMR:O60391 STRING:O60391 PhosphoSite:O60391 PaxDb:O60391
PRIDE:O60391 Ensembl:ENST00000234389 GeneID:116444 KEGG:hsa:116444
UCSC:uc002lqo.1 CTD:116444 GeneCards:GC19P001000 HGNC:HGNC:16768
MIM:606651 neXtProt:NX_O60391 PharmGKB:PA28984 InParanoid:O60391
KO:K05214 OMA:HLQLDWA BindingDB:O60391 ChEMBL:CHEMBL2913
GenomeRNAi:116444 NextBio:79923 Bgee:O60391 CleanEx:HS_GRIN3B
Genevestigator:O60391 GermOnline:ENSG00000116032 Uniprot:O60391
Length = 1043
Score = 141 (54.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 67/342 (19%), Positives = 125/342 (36%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
GYC+D+ + + ++ P+ V G+ G + LV + G V +I
Sbjct: 478 GYCIDLLERLAEDTPFDFELYLVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLE 496
RS VDFT P+ + + ++V +D+ F+ PL W W+ V E
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRARDTASPIG-AFMWPLHWSTWLGVFAALHLTALFLTVYE 596
Query: 497 HRVNEDFRGPAGQQVGTSFWFSFS-TMVFSQR-ERVISN------LARIVVIVWCFVVLI 548
R P G+ T F +S + + ++ R +S+ R+++ +W L+
Sbjct: 597 WRSPYGLT-PRGRNRSTVFSYSSALNLCYAILFRRTVSSKTPKCPTGRLLMNLWAIFCLL 655
Query: 549 LTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY 608
+ SY ++ + + + F G + + + +
Sbjct: 656 VLSSYTANLAAVMVGDKTFEELSGI-----HDPKLHHPAQGFRFGTVWE---SSAEAYIK 707
Query: 609 NSPEDCHELFQKGSVNG---GIAAAFDEIPYM------KLLIGQYCS-----KYAMIEPK 654
S D H ++ S G+A + P + K L+ S K +
Sbjct: 708 KSFPDMHAHMRRHSAPTTPRGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKP 767
Query: 655 FKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK 696
F G+G P +SPL ++S+ I + + D W+K
Sbjct: 768 FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYK 809
Score = 68 (29.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 243 NATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 299
N DL+ G G L + L++T F+G TG ++V G Q S F++ ++ RG
Sbjct: 322 NCGDLQPAGPESPGRFLARFLANTSFQGRTGP-VWVTGSSQVHMSRHFKVWSLRRDPRGA 380
Query: 300 GFW 302
W
Sbjct: 381 PAW 383
>UNIPROTKB|F1MP46 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0042177 "negative regulation
of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0050885
GO:GO:0060079 GO:GO:0030288 GO:GO:0005261 GO:GO:0042177
InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTWRRIS EMBL:DAAA02049538
IPI:IPI00999923 Ensembl:ENSBTAT00000015137 Uniprot:F1MP46
Length = 1242
Score = 160 (61.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + ++ V G+ G +N ++ +V+ D +G +TI
Sbjct: 470 GFCIDILKKLARVVRFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 529
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS VDF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 530 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMF 588
Query: 496 EH----RVNEDFR-----GPAGQQVGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWC 543
E+ N++ G +G S W ++ +VF+ E ++I+V+VW
Sbjct: 589 EYFSPVSYNQNLTSGKRSGGPSFTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLVWA 647
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 648 FFAVIFLASY 657
Score = 50 (22.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/148 (20%), Positives = 61/148 (41%)
Query: 9 LGNKSQVPILSFSATSPS-LTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S LT S F + ++ Q + +++ + W A +
Sbjct: 124 ISSQTHVPILSISGGSAVVLTPKESGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 182
Query: 67 DNQYGE----EMIPSLTDALQAIDTRVPYRSV-ISPLATDDQIEKELYKLFTMQTRVFIL 121
G E + ++TDA + ++ + P ++ L +L V +
Sbjct: 183 SLHPGHALFLEGVRAVTDASYLSWRLLDVLTLELGPGGARQHTQRLLRQL---DAPVLVA 239
Query: 122 HMLPSLGSRIFEKANEIGLMNKGCVWIM 149
+ +F +A + GL+ G VW++
Sbjct: 240 YCSREEAEVLFAEAAQAGLVGPGHVWLV 267
>RGD|619864 [details] [associations]
symbol:Gabbr2 "gamma-aminobutyric acid (GABA) B receptor 2"
species:10116 "Rattus norvegicus" [GO:0004965 "G-protein coupled
GABA receptor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0030054 "cell junction" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR000337 InterPro:IPR002455
InterPro:IPR002457 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 PRINTS:PR00248 PRINTS:PR01176 PRINTS:PR01178
PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259
EMBL:AF074482 Pfam:PF01094 RGD:619864 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0007214
GO:GO:0043005 InterPro:IPR001828 eggNOG:NOG273984 KO:K04615
GO:GO:0004965 GeneTree:ENSGT00530000063129 CTD:9568
HOVERGEN:HBG080355 OrthoDB:EOG4PG606 HOGENOM:HOG000112688
EMBL:AJ011318 EMBL:AF058795 EMBL:AF109405 IPI:IPI00331966
RefSeq:NP_113990.1 UniGene:Rn.162814 ProteinModelPortal:O88871
MINT:MINT-1889821 STRING:O88871 PhosphoSite:O88871 PRIDE:O88871
Ensembl:ENSRNOT00000011573 GeneID:83633 KEGG:rno:83633
UCSC:RGD:619864 InParanoid:O88871 BindingDB:O88871
ChEMBL:CHEMBL4686 NextBio:616227 ArrayExpress:O88871
Genevestigator:O88871 GermOnline:ENSRNOG00000008431 Uniprot:O88871
Length = 940
Score = 157 (60.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 68/279 (24%), Positives = 119/279 (42%)
Query: 18 LSFSATSPSLTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIP 76
LSF+AT+P L + PYFFR +D++ AI ++K F WR + D Q E+
Sbjct: 153 LSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKLLKHFRWRRVGTLTQDVQRFSEVRN 212
Query: 77 SLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKAN 136
LT L D + S +D + KL R+ + ++ +++F A
Sbjct: 213 DLTGVLYGEDIEISDTESFS----NDPCTS-VKKLKGNDVRIILGQFDQNMAAKVFCCAF 267
Query: 137 EIGLMNKGCVWIMTDGM-----------TNLLRTLEPSVIDSMQGVIGVGPHVPKTKALE 185
E + WI+ N R L S++ +M+G IGV +K ++
Sbjct: 268 EESMFGSKYQWIIPGWYEPAWWEQVHVEANSSRCLRRSLLAAMEGYIGVDFEPLSSKQIK 327
Query: 186 NFRVRWKRNFLQE-NPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
+ + F +E N V + F AYD +A+ +++A + + S
Sbjct: 328 TISGKTPQQFEREYNSKRSGVGPSKFHGYAYDGIWVIAKTLQRA------METLHASSRH 381
Query: 245 TDLEAFGISQN--GPKLLQALSSTRFKGLTGDYIFVDGQ 281
++ F + + G +L A++ T F G+TG +F +G+
Sbjct: 382 QRIQDFNYTDHTLGKIILNAMNETNFFGVTGQVVFRNGE 420
>FB|FBgn0053513 [details] [associations]
symbol:Nmdar2 "NMDA receptor 2" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IDA] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=IPI] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IGI;IMP]
[GO:0050975 "sensory perception of touch" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 EMBL:AE014298
GO:GO:0007616 GO:GO:0030288 GO:GO:0072375 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221 KO:K05210
UniGene:Dm.14391 GeneID:31107 KEGG:dme:Dmel_CG33513 CTD:31107
FlyBase:FBgn0053513 GenomeRNAi:31107 NextBio:771978 EMBL:AY616148
RefSeq:NP_001014714.1 SMR:Q9W581 STRING:Q9W581
EnsemblMetazoa:FBtr0070288 UCSC:CG33513-RC InParanoid:Q9W581
OMA:VAEMQEH Uniprot:Q9W581
Length = 1083
Score = 106 (42.4 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 26/104 (25%), Positives = 52/104 (50%)
Query: 376 TGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVF 435
+G+C+D+ + +EL + V G+ +G +N L+ + + D V+ + I
Sbjct: 564 SGFCIDLLEKFAEELGFTYELVRVEDGKWGTLENGKWNGLIADLVNRKTDMVLTSLMINT 623
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
R VDF+ P+ E+G++++V K + + FL+P W+
Sbjct: 624 EREAVVDFSEPFMETGIAIVVA-KRTGIISPTAFLEPFDTASWM 666
Score = 81 (33.6 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 26/151 (17%), Positives = 66/151 (43%)
Query: 5 FIIQLGNKSQVPILSFSATSPSLTSIRSPYFFRGSLNDS--SQAGAITAIIKAFGWREAV 62
+ +QL +P++S++A + L S + L S Q+ A+ +I++ + W +
Sbjct: 197 YFLQLAGYLGIPVISWNADNSGLERRASQSTLQLQLAPSIEHQSAAMLSILERYKWHQFS 256
Query: 63 PIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILH 122
+ ++ + ++ + + + + + S + T +L +L + RV +L+
Sbjct: 257 VVTSQIAGHDDFVQAVRERVAEMQEHFKFTILNSIVVTRTS---DLMELVNSEARVMLLY 313
Query: 123 MLPSLGSRIFEKANEIGLMNKGCVWIMTDGM 153
+ I A E+ L + VW+++ +
Sbjct: 314 ATQTEAITILRAAEEMKLTGENYVWVVSQSV 344
Score = 56 (24.8 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 28/103 (27%), Positives = 40/103 (38%)
Query: 238 TNVSRNATDLEAFGISQNGPKLLQALSSTRFKG-LTGDYI-FV-DGQLQSSAFEIINVNN 294
T S + D E G NG + L + +G L I F DG L+S+ +I+N+
Sbjct: 400 TTQSLSCED-EGRGRWDNGEIFFKYLRNVSIEGDLNKPNIEFTADGDLRSAELKIMNLRP 458
Query: 295 GARGVGFWTPEKGXXXXXXXXXXXXXXXXPIIWPGDSTSDPKG 337
A E G I WPG+S + P+G
Sbjct: 459 SANNKNLVWEEIGVWKSWETQKLDIRD---IAWPGNSHAPPQG 498
Score = 55 (24.4 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 32/143 (22%), Positives = 50/143 (34%)
Query: 587 KGSFVLGILKQLGFDERKLVVYNSPEDCHELFQKGSVNGGIAAAF----DEIPY----MK 638
K SF G + D +N + + K SV G+AA D Y +
Sbjct: 785 KPSFKFGTIPYSHTDSTIHKYFNVMHNYMRQYNKTSVADGVAAVLNGNLDSFIYDGTVLD 844
Query: 639 LLIGQY--CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK 696
L+ Q C + + + G+G F +S V +K +L ++ + W
Sbjct: 845 YLVAQDEDC-RLMTVGSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLERLRRYWMT 903
Query: 697 KHSSC-PDASTVVSSRSLGLNSF 718
+C P SS L L F
Sbjct: 904 --GTCRPGKQEHKSSDPLALEQF 924
>ZFIN|ZDB-GENE-100920-7 [details] [associations]
symbol:grin2db "glutamate receptor, ionotropic,
N-methyl D-aspartate 2D, b" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-100920-7
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00540000070221 EMBL:BX005260
EMBL:CR854957 EMBL:CU462911 IPI:IPI00771763
Ensembl:ENSDART00000103882 Uniprot:E7F3Z4
Length = 1959
Score = 159 (61.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
G+C+D+ K + + + + V G+ G +N +V +V D +G +TI
Sbjct: 487 GFCIDILKRLARIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADMAIGSLTINEE 546
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX-XXXXXXXXWVL 495
RS VDF++P+ E+G+S++V + + + FL+P + +WV ++
Sbjct: 547 RSEVVDFSVPFVETGISVMVS-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIF 605
Query: 496 E-------HRVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQR---ERVISNLARIVVIVWC 543
E +R + + G + +G S W ++ +VF+ E ++I+V+VW
Sbjct: 606 EFFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLWA-LVFNNSVPVENPKGTTSKIMVLVWA 664
Query: 544 FVVLILTQSY 553
F +I SY
Sbjct: 665 FFAVIFLASY 674
>MGI|MGI:95822 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, NMDA2C (epsilon
3)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006812 "cation transport" evidence=IMP]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0009611
"response to wounding" evidence=IGI] [GO:0014069 "postsynaptic
density" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0033058
"directional locomotion" evidence=IGI] [GO:0034220 "ion
transmembrane transport" evidence=IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IGI] [GO:0042391 "regulation of membrane potential"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0060079 "regulation
of excitatory postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95822 GO:GO:0005737
GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905
HOVERGEN:HBG052636 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
EMBL:D10694 IPI:IPI00321321 PIR:I49705 RefSeq:NP_034480.2
UniGene:Mm.39090 ProteinModelPortal:Q01098 SMR:Q01098 IntAct:Q01098
MINT:MINT-104161 STRING:Q01098 PhosphoSite:Q01098 PaxDb:Q01098
PRIDE:Q01098 Ensembl:ENSMUST00000003351 Ensembl:ENSMUST00000106554
GeneID:14813 KEGG:mmu:14813 HOGENOM:HOG000231061 InParanoid:Q01098
BindingDB:Q01098 ChEMBL:CHEMBL3555 NextBio:287007 Bgee:Q01098
Genevestigator:Q01098 GermOnline:ENSMUSG00000020734 Uniprot:Q01098
Length = 1239
Score = 161 (61.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 50/217 (23%), Positives = 100/217 (46%)
Query: 351 VPVKKGFSD-FVNVTIDPKTQEPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS 409
VP ++ + F + I P T+ G+C+D+ K + + + ++ V G+
Sbjct: 431 VPCRRQSNHTFSSGDITPYTK--LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVR 488
Query: 410 GSYNDLVYQVFLGEFDAVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVF 469
G +N ++ +V+ D +G +TI RS +DF++P+ E+G+S++V + + + F
Sbjct: 489 GVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVA-RSNGTVSPSAF 547
Query: 470 LQPLTWDLWVTXXXX-XXXXXXXXWVLEH----RVNEDFR-----GPAGQQVGTSFWFSF 519
L+P + +WV ++ E+ N++ G +G S W +
Sbjct: 548 LEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKSGGPSFTIGKSVWLLW 607
Query: 520 STMVFSQR---ERVISNLARIVVIVWCFVVLILTQSY 553
+ +VF+ E ++I+V+VW F +I SY
Sbjct: 608 A-LVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASY 643
Score = 47 (21.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/146 (18%), Positives = 60/146 (41%)
Query: 9 LGNKSQVPILSFSATSPSLTSIRSP--YFFRGSLNDSSQAGAITAIIKAFGWREAVPIYV 66
+ +++ VPILS S S + + + P F + ++ Q + +++ + W A +
Sbjct: 111 VSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDW-SAFAVIT 169
Query: 67 DNQYGEEMIPSLTDALQAIDTRVPYR--SVIS-PLATDDQIEKELYKLFTMQTRVFILHM 123
G + A+ A + + +R V++ L + L + V + +
Sbjct: 170 SLHPGHALFLEGVRAV-ADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYC 228
Query: 124 LPSLGSRIFEKANEIGLMNKGCVWIM 149
+F +A + GL+ G VW++
Sbjct: 229 SREEAEVLFAEAAQAGLVGPGHVWLV 254
>FB|FBgn0026255 [details] [associations]
symbol:clumsy "clumsy" species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:AE014134 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
RefSeq:NP_001036373.1 UniGene:Dm.12535 ProteinModelPortal:Q0E8N6
SMR:Q0E8N6 STRING:Q0E8N6 PRIDE:Q0E8N6 EnsemblMetazoa:FBtr0110895
GeneID:35394 KEGG:dme:Dmel_CG8681 UCSC:CG8681-RB CTD:35394
FlyBase:FBgn0026255 OMA:WTAMESA OrthoDB:EOG4FQZ6P PhylomeDB:Q0E8N6
GenomeRNAi:35394 NextBio:793295 Bgee:Q0E8N6 Uniprot:Q0E8N6
Length = 1002
Score = 137 (53.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 46/239 (19%), Positives = 93/239 (38%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSS--SGSYNDLVYQVFLGEFDAVVGDITIV 434
GY +D+ + + L + + P G+ + + +++ +V Q+ G D + D+T+
Sbjct: 447 GYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMT 506
Query: 435 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWV 494
+R VDFT P+ G+S++ + + + FL P + D+W+ +
Sbjct: 507 SSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFA 566
Query: 495 LEHRVNEDFRGP----AGQQVGTSF------WFSFSTMVFSQRERVISNLA--RIVVIVW 542
L +D+ P ++V + W S +++ Q ++ A R+V +W
Sbjct: 567 LARMAPDDWENPHPCKEPEEVENIWSIMNTTWLSIGSLM-GQGCDILPKAASTRLVTGMW 625
Query: 543 CFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD-NVGYQKGSFVLGILKQLGF 600
F L++ SY I + L + G G +G + F
Sbjct: 626 WFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGGSTMGFFRDSNF 684
Score = 69 (29.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 20/95 (21%), Positives = 41/95 (43%)
Query: 49 ITAIIKAFGWREAVPIYVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKEL 108
+ I+++F WR +Y ++ + L D LQ + + + + L D L
Sbjct: 145 LAEIVQSFAWRSFTVVYET----DKELQQLQDILQ-VGEPISNPTTVKQLGPGDDHRPFL 199
Query: 109 YKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNK 143
++ ILH P +I ++ANE+ ++ +
Sbjct: 200 KEIKLSTDNCLILHCAPDNLLKILQQANELKMLGE 234
>UNIPROTKB|Q8TCU5 [details] [associations]
symbol:GRIN3A "Glutamate receptor ionotropic, NMDA 3A"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0042165 "neurotransmitter binding"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045202 "synapse" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS;IDA] [GO:0045471 "response to ethanol" evidence=IDA]
[GO:0051721 "protein phosphatase 2A binding" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006816
"calcium ion transport" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0014069 GO:GO:0045471 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 DrugBank:DB01161 DrugBank:DB00721
GO:GO:0043025 GO:GO:0016358 GO:GO:0043005 GO:GO:0045202
GO:GO:0060134 DrugBank:DB00142 GO:GO:0048511 GO:GO:0030288
DrugBank:DB00333 DrugBank:DB00514 GO:GO:0006816 DrugBank:DB00392
GO:GO:0051721 EMBL:AL591377 DrugBank:DB00740 DrugBank:DB01043
DrugBank:DB00454 DrugBank:DB01173 DrugBank:DB00949 DrugBank:DB00898
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0016594
DrugBank:DB00659 DrugBank:DB01221 EMBL:AF416558 EMBL:AJ416950
EMBL:AB075853 EMBL:AL356516 EMBL:BC167432 IPI:IPI00455154
RefSeq:NP_597702.2 UniGene:Hs.654783 ProteinModelPortal:Q8TCU5
SMR:Q8TCU5 STRING:Q8TCU5 PhosphoSite:Q8TCU5 DMDM:212276445
PaxDb:Q8TCU5 PRIDE:Q8TCU5 Ensembl:ENST00000361820 GeneID:116443
KEGG:hsa:116443 UCSC:uc004bbp.2 CTD:116443 GeneCards:GC09M104331
H-InvDB:HIX0008248 H-InvDB:HIX0125606 HGNC:HGNC:16767 MIM:606650
neXtProt:NX_Q8TCU5 PharmGKB:PA28983 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 InParanoid:Q8TCU5 KO:K05213
OMA:QSQGEMM OrthoDB:EOG480HW2 BindingDB:Q8TCU5 ChEMBL:CHEMBL4787
GenomeRNAi:116443 NextBio:79919 Bgee:Q8TCU5 CleanEx:HS_GRIN3A
Genevestigator:Q8TCU5 GermOnline:ENSG00000198785 GO:GO:0004972
Uniprot:Q8TCU5
Length = 1115
Score = 115 (45.5 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
GYC+D+ + + +++ + V G+ +G + LV + G V +I
Sbjct: 578 GYCIDLLEKIAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLRGTAHMAVTSFSINTA 637
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
RS +DFT P+ + + ++V +D+ F+ PL W +W+
Sbjct: 638 RSQVIDFTSPFFSTSLGILVRTRDTAAPIG-AFMWPLHWTMWL 679
Score = 69 (29.3 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 208 NIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTR 267
++F DA +A AV A + + N ++E ++ +G L + L++T
Sbjct: 383 SVFEHYVQDAMELVARAVATATMIQPELALIPSTMNCMEVETTNLT-SGQYLSRFLANTT 441
Query: 268 FKGLTGDYIFVDGQ-LQSSA--FEIINVNNGARGVGFWT 303
F+GL+G I V G + SS F I N+ + G WT
Sbjct: 442 FRGLSGS-IRVKGSTIVSSENNFFIWNLQHDPMGKPMWT 479
Score = 66 (28.3 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 645 CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDA 704
C + +P F G+G P +SPL ++S+ I M + D W++ +
Sbjct: 859 CKLLTVGKP-FAIEGYGIGLPPNSPLTANISELISQYKSHGFMDMLHDKWYRVVPCGKRS 917
Query: 705 STVVSSRSLGLNSF 718
V + +G+ F
Sbjct: 918 FAVTETLQMGIKHF 931
Score = 46 (21.3 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 103 QIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT-NLLRT 159
QI+ E K T +F M S+ RIFE + G+M W++ D LRT
Sbjct: 312 QIQLESIKNSTPTVVMFGCDM-ESI-RRIFEITTQFGVMPPELRWVLGDSQNVEELRT 367
>UNIPROTKB|F6QCU7 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00711099 Ensembl:ENSBTAT00000026817
Uniprot:F6QCU7
Length = 797
Score = 145 (56.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 46/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + V G+ + G +N +V ++ + D V +TI +
Sbjct: 353 GYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 412
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 413 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 472
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 473 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 532
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 533 FFTLIIISSY 542
Score = 58 (25.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 59/295 (20%), Positives = 118/295 (40%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQY 70
N +VP + PS+ + R ++ + ++ + A+ ++ + W+ +Y D+
Sbjct: 53 NALEVPHIQTRWKHPSVDN-RDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDST- 110
Query: 71 GEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLFTMQTRVFILHML 124
G + L A + ++ R + S PL + + KE Y +F H
Sbjct: 111 GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCS------H-- 162
Query: 125 PSLGSRIFEKANEIGLMNKGCVWIMT--DGMTNLLRTLEPSVIDSMQG--VIGV-GPHVP 179
+ I ++ +G+M + + T D L S ++ M G ++ + PHV
Sbjct: 163 -ETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN-MTGFRLLNIDNPHV- 219
Query: 180 KTKALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTN 239
+ +E +W LQ P + L + G++ +A + +AV I S +
Sbjct: 220 -SAIIE----KWSMERLQAPPR-PETGL-LDGMMTTEAA-LMYDAVYMVAIASHRASQLT 271
Query: 240 VSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIF--VDGQLQSSAFEIINV 292
VS + + GP+ + + ++ GLTG F DG + +II++
Sbjct: 272 VS--SLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDIISL 324
Score = 40 (19.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 16 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 49
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KT+ R DL+ + + G
Sbjct: 300 GLTGRITFNKTDGLRKDFDLDIISLKEEG 328
>UNIPROTKB|F1MWI8 [details] [associations]
symbol:F1MWI8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0051205 "protein insertion into membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0051924
GO:GO:0030288 GO:GO:0051205 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:HLQLDWA
EMBL:DAAA02020240 EMBL:DAAA02020241 EMBL:DAAA02020242
IPI:IPI00691902 Ensembl:ENSBTAT00000036098 Uniprot:F1MWI8
Length = 1045
Score = 151 (58.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 74/359 (20%), Positives = 138/359 (38%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
GYC+D+ + + ++ P+ V G+ G + LV + G V +I
Sbjct: 483 GYCIDLLERLAEDAPFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 542
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLE 496
RS VDFT P+ + + ++V +D+ F+ PL W +W+ + E
Sbjct: 543 RSQVVDFTSPFFSTSLGIMVRARDTASPIG-AFMWPLHWSMWLGVFAALHLTALFLTLYE 601
Query: 497 HRVNEDFRGPAGQQVGTSFWFSFS-TMVFSQR-ERVISN------LARIVVIVWCFVVLI 548
R P G+ T F +S + + ++ R +S+ R+++ +W L+
Sbjct: 602 WRSPFGLT-PRGRNRDTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRLLMNLWAIFCLL 660
Query: 549 LTQSYXXXXXXXXXXXXXXXXIT---DVKMLIK-RGDNVGYQKGSFVLGILKQLGFDERK 604
+ SY ++ D K+ +G G S +K+ F E
Sbjct: 661 VLSSYTANLAAVMVGDKTFEELSGIHDPKLFFNXQGFRFGTVWESSAEAYIKK-SFPEMY 719
Query: 605 LVV--YNSPEDCHELFQKGSVNGGIAA-AFDE--IPYMKLLIGQYCSKYAMIEPKFKTAG 659
V +++P H + S + A D+ + Y ++ I C + +P F G
Sbjct: 720 SHVRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDY-EVSIDADCRLLTVGKP-FVIEG 777
Query: 660 FGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSF 718
+G P +SPL ++S+ I + + D W+K V + +G+ F
Sbjct: 778 YGIGLPRNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMGVYHF 836
Score = 54 (24.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 22/90 (24%), Positives = 36/90 (40%)
Query: 216 DATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGDY 275
D +A A++ A + N +DL +G L + L++T F G TG
Sbjct: 300 DVVELVARALDSAARVQPEHTLLPATVNCSDLPPPEPESSGRLLTRFLANTSFWGRTGP- 358
Query: 276 IFVDGQLQ---SSAFEIINVNNGARGVGFW 302
++V Q S F + ++ RG W
Sbjct: 359 VWVTNSSQVHISRRFRLWSLRRDLRGAPAW 388
>ZFIN|ZDB-GENE-070912-354 [details] [associations]
symbol:grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 ZFIN:ZDB-GENE-070912-354 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:CR392012 EMBL:CT954241
IPI:IPI00482751 Ensembl:ENSDART00000058111 Uniprot:E7F2N4
Length = 1118
Score = 158 (60.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 73/367 (19%), Positives = 139/367 (37%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
GYC+D+ + + +++ + V G+ G ++ LV + G D V +I
Sbjct: 522 GYCIDLLEKLAEDMHFEFDLYIVGDGKYGAWKGGRWSGLVGDLLSGVADMAVTSFSINSA 581
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLE 496
RS +DFT P+ + + ++V KD+ F+ PL W +WV ++
Sbjct: 582 RSRVIDFTSPFFSTSLGILVRSKDTAAPIG-AFMWPLHWSMWV--GIFVALHITALFITL 638
Query: 497 HRVNEDF-RGPAGQQVGTSFWFS----------FSTMVFSQRERVISNLARIVVIVWCFV 545
+ N F P G+ F +S F V S+ + + R ++ +W
Sbjct: 639 YEWNSPFGMTPHGRNRIRVFSYSSALNLCYAILFGRTVASKTPKCWTG--RFLMNLWAIF 696
Query: 546 VLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKL 605
L++ SY ++ + + ++G++ G +++ ++
Sbjct: 697 CLLVLSSYTANLAAVMVGEKTFEEVSGIHDVKLHHPSLGFR-----FGTVRESSAED--Y 749
Query: 606 VVYNSPEDCHEL---FQKGSVNGGIAAAFDEIPYM------KLLIGQYCS-----KYAMI 651
V + PE HE F K + G++ + P + K L+ S K +
Sbjct: 750 VKKSFPE-MHEYMRRFNKPTTPDGVSTLKTDPPQLDAFIMDKALLDYEVSIDADCKLLTV 808
Query: 652 EPKFKTAGFGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSR 711
F G+G P +SPL +VS+ + M + D W+K V +
Sbjct: 809 GKPFAIEGYGIGLPQNSPLTRNVSEYVSRYKSDGYMDMLHDKWYKVVPCGKRVFAVTETL 868
Query: 712 SLGLNSF 718
+G+ F
Sbjct: 869 QMGIQHF 875
Score = 47 (21.6 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 252 ISQNGPKLLQALSSTRFKGLTGDYIFVDGQ----LQSSAFEIINVNNGARGVGFW 302
+ +G L + LS+T F GLTG + V+ L S F I ++ G W
Sbjct: 355 LPSSGQYLARFLSNTSFTGLTGP-VRVERSFSRVLTSQRFHIWSLQRDPLGQPSW 408
>ZFIN|ZDB-GENE-050522-281 [details] [associations]
symbol:olfcw1 "olfactory receptor C family, w1"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000337 InterPro:IPR004073
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR01535
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
ZFIN:ZDB-GENE-050522-281 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
InterPro:IPR001828 GeneTree:ENSGT00690000101821 EMBL:BX649622
IPI:IPI00500891 ProteinModelPortal:F1QLP7
Ensembl:ENSDART00000139869 Uniprot:F1QLP7
Length = 866
Score = 160 (61.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 62/253 (24%), Positives = 112/253 (44%)
Query: 6 IIQLGNKSQVPILSFSATSPSLTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWREAVPI 64
I +L N +P++S+ A+ L++ PYFFR +D +QA A+ ++K FGW +
Sbjct: 159 ISRLLNLFHIPLVSYFASCACLSNKHQFPYFFRTIPSDVNQANALARLVKHFGWTWVGTV 218
Query: 65 YVDNQYGEEMIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHML 124
D+ YG I T A+ + V YR +I L T Q++ + + V +
Sbjct: 219 GADDAYGRTGIDLFTAAVTQLGVCVSYRIIIPKLPTQQQLQDIVRTIRDSSAHVLVAF-- 276
Query: 125 PSLGSRIFEKANEIGLMN-KGCVWIMTDG-MTNLLRTLEPSVIDSMQGVIGVGPHVPKTK 182
++ I +EI L N G W+ ++ +T+ L + + + S+ G IG
Sbjct: 277 -AIEEDIKPVVDEIVLQNVTGKQWVASEAWVTSTLISTKEN-FPSLSGTIGF-------- 326
Query: 183 ALENFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSR 242
A+ + ++FL + D N+F ++ T+ + + TS D N S
Sbjct: 327 AIRRAEIPGLKHFLDSIQPLAD-PYNVFAREFWE-TQFQC-TLNTSLPTSSTMDPVNYSH 383
Query: 243 NATDLEAFGISQN 255
+ T +E +Q+
Sbjct: 384 SCTGMERMQDTQS 396
Score = 42 (19.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 20/102 (19%), Positives = 36/102 (35%)
Query: 258 KLLQALSSTRFKGLTGDYIFVDGQLQS-SAFEIINVNNGARGVGFWTPEKGXXXXXX-XX 315
++++ L + + GD I+ D +++I+N G V G
Sbjct: 449 QVIEVLRKVNYTNMFGDLIYFDENGDPVGSYDIVNWQKGGDDVPVQYITVGRFDSSLPKG 508
Query: 316 XXXXXXXXPIIWPGDSTSDPKGW---EVPTNEKKLRI-GVPV 353
I+W G + P P +K+R+ G PV
Sbjct: 509 QQLVLNQNKIVWHGGTNKVPVSVCSASCPPGYRKVRLEGQPV 550
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 386 VIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
V++++ Y + + Y +G GSY+ + +Q G D V IT+
Sbjct: 453 VLRKVNYTNMFGDLIYFDENGDPVGSYDIVNWQK--GGDDVPVQYITV 498
>MGI|MGI:2386030 [details] [associations]
symbol:Gabbr2 "gamma-aminobutyric acid (GABA) B receptor, 2"
species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0004965 "G-protein coupled GABA
receptor activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR000337 InterPro:IPR002455 InterPro:IPR002457
InterPro:IPR017978 InterPro:IPR017979 Pfam:PF00003 PRINTS:PR00248
PRINTS:PR01176 PRINTS:PR01178 PROSITE:PS00979 PROSITE:PS00980
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094 MGI:MGI:2386030
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0030054
GO:GO:0045211 GO:GO:0007214 GO:GO:0043005 EMBL:AL831741
InterPro:IPR001828 eggNOG:NOG273984 KO:K04615 GO:GO:0004965
GeneTree:ENSGT00530000063129 CTD:9568 HOVERGEN:HBG080355
OMA:YRETKQL OrthoDB:EOG4PG606 EMBL:AL772399 EMBL:AL844224
EMBL:BX005247 EMBL:BX571848 EMBL:AY255605 IPI:IPI00409336
RefSeq:NP_001074610.1 UniGene:Mm.101909 ProteinModelPortal:Q80T41
SMR:Q80T41 IntAct:Q80T41 STRING:Q80T41 PhosphoSite:Q80T41
PaxDb:Q80T41 PRIDE:Q80T41 Ensembl:ENSMUST00000107749 GeneID:242425
KEGG:mmu:242425 UCSC:uc008sug.1 HOGENOM:HOG000112688
InParanoid:Q80T41 NextBio:385343 Bgee:Q80T41 CleanEx:MM_GABBR2
Genevestigator:Q80T41 Uniprot:Q80T41
Length = 940
Score = 153 (58.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 67/279 (24%), Positives = 119/279 (42%)
Query: 18 LSFSATSPSLTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIP 76
LSF+AT+P L + PYFFR +D++ AI ++K F WR + D Q E+
Sbjct: 153 LSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKLLKHFRWRRVGTLTQDVQRFSEVRN 212
Query: 77 SLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKAN 136
LT L D + S +D + KL R+ + ++ +++F A
Sbjct: 213 DLTGVLYGEDIEISDTESFS----NDPCTS-VKKLKGNDVRIILGQFDQNMAAKVFCCAF 267
Query: 137 EIGLMNKGCVWIMTDGM-----------TNLLRTLEPSVIDSMQGVIGVGPHVPKTKALE 185
E + WI+ N R L S++ +M+G IGV +K ++
Sbjct: 268 EESMFGSKYQWIIPGWYEPAWWEQVHVEANSSRCLRRSLLAAMEGYIGVDFEPLSSKQIK 327
Query: 186 NFRVRWKRNFLQE-NPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
+ + + +E N V + F AYD +A+ +++A + + S
Sbjct: 328 TISGKTPQQYEREYNSKRSGVGPSKFHGYAYDGIWVIAKTLQRA------METLHASSRH 381
Query: 245 TDLEAFGISQN--GPKLLQALSSTRFKGLTGDYIFVDGQ 281
++ F + + G +L A++ T F G+TG +F +G+
Sbjct: 382 QRIQDFNYTDHTLGRIILNAMNETNFFGVTGQVVFRNGE 420
>ZFIN|ZDB-GENE-040913-1 [details] [associations]
symbol:grid2 "glutamate receptor, ionotropic, delta
2" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-040913-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 EMBL:AB154207 IPI:IPI00487693
RefSeq:NP_001004123.1 UniGene:Dr.116180 ProteinModelPortal:Q68Y21
SMR:Q68Y21 STRING:Q68Y21 GeneID:448841 KEGG:dre:448841 CTD:2895
InParanoid:Q68Y21 KO:K05207 OrthoDB:EOG4SBDX4 NextBio:20832541
Uniprot:Q68Y21
Length = 1009
Score = 135 (52.6 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 54/221 (24%), Positives = 89/221 (40%)
Query: 371 EPTSVTGYCVDVFKAVIQELPYAVAYDFVPYGQPD---GS--SSGSYNDLVYQVFLGEFD 425
+P G+ +DV A+ L + Y+ Y PD GS + G++N L+ ++ D
Sbjct: 463 KPKKYQGFSIDVLDALANYLGFK--YEI--YVAPDHKYGSQQADGTWNGLIGELVFKRAD 518
Query: 426 AVVGDITIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXX 485
+ +TI R + VDFT Y + V +++ K + + + L P LW
Sbjct: 519 VGLSALTITPERESVVDFTTRYMDYSVGVLLR-KAERTVDMFACLAPFDLSLWACIAGTV 577
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQQVGT----SFWFSFSTMVFSQRERVISNLA-RIVVI 540
++L +N R P G T S WF + + V E + LA R+++
Sbjct: 578 LLVGTLVYLLNW-LNPP-RLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMG 635
Query: 541 VWCFVVLILTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGD 581
VW LI+ SY I ++ L K+ D
Sbjct: 636 VWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAKQTD 676
Score = 69 (29.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 66/280 (23%), Positives = 108/280 (38%)
Query: 49 ITAIIKAFGWREAVPIYVDNQYGEEMIPSLTD--ALQAIDTRVP-YRSVISPLATDD--- 102
I ++ + W++ + I+ D Y I + D + Q +D + S I+ + T
Sbjct: 156 IFQVVMEYTWQKFI-IFYDTDYDIRGIENFLDQTSQQGMDVSLQKVESNINMMITGMFRT 214
Query: 103 -QIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 161
++E EL++ + R +L M P+ + E L+ C WI+ + + + E
Sbjct: 215 MRVE-ELHR-YRDTLRRAVLFMSPATAKAFITEVVETNLVAFDCQWIIINEEISDMDVQE 272
Query: 162 PSVIDSMQGVIGVGPHVPKTKAL-ENFRVRWKRNFLQENPSIVDVE------LNIFGLLA 214
V+ S IG V +T L +N R RN + N S+ D + L I
Sbjct: 273 -LVMKS----IGRLTLVRQTFPLPQNTSQRCVRNNHRINTSLCDPKDPKAQMLEITNRYI 327
Query: 215 YDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTRFKGLTGD 274
YD LA + ++S + + Q G +L+ + GLT
Sbjct: 328 YDTVLLLANTFHRKLEDRKWHSMASLSCIRKGSKPW---QGGKSMLETVKKGGVSGLTSL 384
Query: 275 YIFVD-GQLQSSAFEIINVNNG---ARGVG---FWTPEKG 307
F D G + FEI+ N G RGV W P G
Sbjct: 385 LEFNDNGSNPNIHFEILGTNYGEDRGRGVSRLATWDPIHG 424
>UNIPROTKB|E1BK87 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0016358 GO:GO:0035235 GO:GO:0043005 GO:GO:0060134
GO:GO:0030288 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 OMA:QSQGEMM GO:GO:0004972
EMBL:DAAA02024314 EMBL:DAAA02024315 EMBL:DAAA02024316
EMBL:DAAA02024317 IPI:IPI00698607 Ensembl:ENSBTAT00000024549
Uniprot:E1BK87
Length = 1137
Score = 130 (50.8 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 67/359 (18%), Positives = 132/359 (36%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
GYC+D+ + + +++ + V G+ +G + LV + G V +I
Sbjct: 578 GYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGSAHLAVTSFSINTA 637
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLE 496
RS +DFT P+ + + ++V +D+ F+ PL W +W+ + E
Sbjct: 638 RSQVIDFTSPFFSTSLGILVRTRDTAAPIG-AFMWPLHWTMWLGIFVALHITAIFLTLYE 696
Query: 497 HRVNEDFRGPAGQQVGTSFWFSFS-----TMVFSQRERVISN---LARIVVIVWCFVVLI 548
+ P G+ F FS + ++F + + R ++ +W +
Sbjct: 697 WKSPFGMT-PKGRNRSKVFSFSSALNVCYALLFGRTAAIKPPKCWTGRFLMNLWAIFCMF 755
Query: 549 LTQSYXXXXXXXXXXXXXXXXIT---DVKMLI-KRGDNVGYQKGSFVLGILKQLGFDERK 604
+Y ++ D K+ +G G + S ++Q F E
Sbjct: 756 CLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQ-SFPEMH 814
Query: 605 LVV--YNSPEDCHEL-FQKGSVNGGIAAAFDE--IPYMKLLIGQYCSKYAMIEPKFKTAG 659
+ YN P + + K A D+ + Y ++ + C + +P F G
Sbjct: 815 EYMRRYNVPATLDGVAYLKNDPEKLDAFIMDKALLDY-EVSVDADCKLLTVGKP-FAIEG 872
Query: 660 FGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSF 718
+G P +SP ++S+ I M + D W+K + V + +G+ F
Sbjct: 873 YGIGLPPNSPFTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 931
Score = 77 (32.2 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 208 NIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSSTR 267
++F DA +A AV A + + N D+E ++ +G L + L++T
Sbjct: 383 SVFEYYVQDAMELVARAVATATMIQPELALIPSTVNCMDVETANLT-SGQYLSRFLANTT 441
Query: 268 FKGLTGDYIFVDGQLQSSA---FEIINVNNGARGVGFWT 303
F+GL+G I V G S+ F I N+ N G WT
Sbjct: 442 FRGLSGS-IKVKGSTIISSENNFFIWNLQNDPMGKPMWT 479
Score = 44 (20.5 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 130 RIFEKANEIGLMNKGCVWIMTDGMT-NLLRT 159
RIFE + G+M W++ D LRT
Sbjct: 337 RIFEITTQFGVMLPELRWVLGDSQNVEKLRT 367
>ZFIN|ZDB-GENE-070821-6 [details] [associations]
symbol:grik5 "glutamate receptor, ionotropic, kainate
5" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-6 GO:GO:0016021
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 EMBL:BX005242 EMBL:CR388405
IPI:IPI00884667 ProteinModelPortal:F1RCX4
Ensembl:ENSDART00000114766 Bgee:F1RCX4 Uniprot:F1RCX4
Length = 716
Score = 121 (47.7 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 45/193 (23%), Positives = 75/193 (38%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITI 433
G+CVD+ + + L + V YG P+ +GS+ +V ++ + D V TI
Sbjct: 436 GFCVDMLRELSDILKFTYRIKLVDDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 493
Query: 434 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX--------- 484
R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 494 TSEREKVIDFSKPFMTLGISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 553
Query: 485 -XXXXXXXXWVLEHRVNEDFRGPAGQQ--VGTSFWFSFSTMVFSQRERVISNLA-RIVVI 540
W H + R Q +G S WF + E + L+ R V
Sbjct: 554 LSARLSPYEWYNPHPCLRERRDLLENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSG 613
Query: 541 VWCFVVLILTQSY 553
VW LI+ SY
Sbjct: 614 VWWAFTLIIISSY 626
Score = 79 (32.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 44/219 (20%), Positives = 85/219 (38%)
Query: 92 RSVISPLATDDQIEKE--LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 149
R +S DD ++ L ++ + I+ S+ I +KA+E+G+ + +I+
Sbjct: 176 RETLSIRMLDDNLDPTPLLKEIRDDKIATIIIDANASISYLILKKASELGMTSAFYKYIL 235
Query: 150 TDGMTNLLRTLEPSVIDSMQGVIGVG----PHVPKTKALENFRVRWKRNFLQENPSIVDV 205
T M L L+ ++D ++G H + + + + W+ NP
Sbjct: 236 TT-MDFPLLWLD-DIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWREG-CDINPYPGPA 292
Query: 206 ELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNATDLEAFGISQNGPKLLQALSS 265
+ L +DA + AV++ + + + I Q+G L+ L
Sbjct: 293 ---LSSALLFDAVHVVVSAVQELNRSQ------EIGVKPLSCTSPQIWQHGTSLMNYLRM 343
Query: 266 TRFKGLTGDYIFVD-GQLQSSAFEIINVNNGA-RGVGFW 302
+ GLTG F GQ + I+ + G + +G W
Sbjct: 344 VEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIW 382
Score = 57 (25.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 154 TNLLRTLEPSVIDSMQGVIGVGPHVPKTKALENFRVRWKRNFLQENPSIVDVELNIFGLL 213
T +L ++ + I V G G + A EN N + ENP+ VE++IF L
Sbjct: 9 TPVLSSVRMAAILDDSSVCGRGERLALALARENI------NSVMENPARARVEVDIFELQ 62
Query: 214 A---YDATRALAEAVEKAGITSFG 234
Y+ T + + + K ++ G
Sbjct: 63 KDSQYETTDTMCQILPKGVVSVIG 86
>UNIPROTKB|I3LMD3 [details] [associations]
symbol:GRIN3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0051205 "protein insertion into membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0051924
GO:GO:0030288 GO:GO:0051205 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:HLQLDWA
EMBL:FP475994 Ensembl:ENSSSCT00000026993 Uniprot:I3LMD3
Length = 1040
Score = 143 (55.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 70/359 (19%), Positives = 138/359 (38%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSSGSYNDLVYQVFLGEFDAVVGDITIVFN 436
GYC+D+ + + ++ P+ V G+ G + LV + G V +I
Sbjct: 478 GYCIDLLERLAEDTPFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 437 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXXXXXXXXXXWVLE 496
RS VDF+ P+ + + ++V +D+ F+ PL W +W+ + E
Sbjct: 538 RSQVVDFSSPFFSTSLGIMVRSRDTASPIG-AFMWPLHWSMWLGVFAALHLTALFLTLYE 596
Query: 497 HRVNEDFRGPAGQQVGTSFWFSFS-TMVFSQR-ERVISN------LARIVVIVWCFVVLI 548
R P G+ T F +S + + ++ R +S+ R+++ +W L+
Sbjct: 597 WRSPYGLT-PRGRNRATVFSYSSALNLCYAILFGRTVSSKTPKCPTGRLLMNLWAIFCLL 655
Query: 549 LTQSYXXXXXXXXXXXXXXXXITDVKMLIKRGDNVGYQKG----SFVLGILKQLGFDERK 604
+ SY ++ + + G++ G S +K+ F E
Sbjct: 656 VLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEAYIKK-SFPEMY 714
Query: 605 LVV--YNSPEDCHELFQKGSVNGGIAA-AFDE--IPYMKLLIGQYCSKYAMIEPKFKTAG 659
+ +++P H + S + A D+ + Y ++ I C + +P F G
Sbjct: 715 AHMRRHSAPTTPHGVSMLTSDPPKLNAFIMDKSLLDY-EVSIDADCRLLTVGKP-FAIEG 772
Query: 660 FGFVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSF 718
+G P +SPL ++S+ I + + D W+K V + +G+ F
Sbjct: 773 YGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMGIYHF 831
Score = 59 (25.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 243 NATDLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 299
N DL+ G +G L + L++T F+G TG ++V G Q S F + ++ + G
Sbjct: 322 NCNDLQP-GSESSGLFLARFLANTSFQGHTGP-VWVTGSSQVHISRRFRVWSLRHDPLGA 379
Query: 300 GFW 302
W
Sbjct: 380 PAW 382
>UNIPROTKB|E2RFB5 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03000923 Ensembl:ENSCAFT00000007929
Uniprot:E2RFB5
Length = 980
Score = 111 (44.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVP---YG--QPDGSSSGSYNDLVYQVFLGEFDAVVGDI 431
G+CVD+ + + + L + V YG +P+GS +G +L+ + + D V
Sbjct: 444 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQ---KADLAVAAF 500
Query: 432 TIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV 479
TI R +DF+ P+ G+S++ + +K + FL P + +W+
Sbjct: 501 TITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWL 548
Score = 78 (32.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 56/261 (21%), Positives = 95/261 (36%)
Query: 511 VGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWCFVVLILTQSYXXXXXXXXXXXXXXXX 569
+G S WF + E + L+ R V VW LI+ SY
Sbjct: 592 LGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVP 651
Query: 570 ITDVKMLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY----NSPEDCH-ELFQKGSVN 624
+ L + N+ Y G+ G F + Y N + +F K S
Sbjct: 652 VESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK-STE 706
Query: 625 GGIAAAFDEIPYMKLL---IGQY-----CSKYAMIEPKFKTAGFGFVFPLHSPLVHDVSK 676
GIA + Y LL + +Y C+ I T G+G PL SP +++
Sbjct: 707 EGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEITL 764
Query: 677 AILNVTEGDKMKEIEDAWFKKHSSCPDASTVVSSRSLGLNSFWXXXXXXXXXXXXXXXXX 736
AIL + E ++++ ++ W++ CP ++ LG+ +
Sbjct: 765 AILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMENIGGIFVVLICGLIIAVFVA 822
Query: 737 MAVFIHQHWNVLKNSESSFLS 757
+ FI W+ +++ES +S
Sbjct: 823 VMEFI---WSTRRSAESEEVS 840
Score = 57 (25.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 34/179 (18%), Positives = 68/179 (37%)
Query: 126 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVIDSMQGVIGVGPHVPKTKALE 185
S+ I KA+E+G+ + +I+T +L L+ +++ ++G +
Sbjct: 221 SISHLILRKASELGMTSAFYKYILTTMDFPILH-LD-GIVEDTSNILGFSMFSTDVHSGP 278
Query: 186 NFRVRWKRNFLQENPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNAT 245
+F K + + + + + L +DA + AV + + +
Sbjct: 279 HFSPA-KTHSYKHMCTDTCPQPQLSAALMFDAVHVVVSAVRELNRSQ------EIGVKPL 331
Query: 246 DLEAFGISQNGPKLLQALSSTRFKGLTGDYIFVD-GQLQSSAFEIINVNN-GARGVGFW 302
+ I +G L+ L + GLTG F GQ + I+ + G R +G W
Sbjct: 332 ACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW 390
>UNIPROTKB|F1SSF1 [details] [associations]
symbol:F1SSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR000337 InterPro:IPR002455
InterPro:IPR002457 PRINTS:PR00248 PRINTS:PR01176 PRINTS:PR01178
Pfam:PF01094 GO:GO:0016021 InterPro:IPR001828 GO:GO:0004965
GeneTree:ENSGT00530000063129 EMBL:CU302414 EMBL:CU466963
EMBL:CU633570 Ensembl:ENSSSCT00000005917 OMA:NDASINC Uniprot:F1SSF1
Length = 467
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 64/279 (22%), Positives = 119/279 (42%)
Query: 18 LSFSATSPSLTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIP 76
LSF+AT+P L + PYFFR +D++ AI ++K + W+ + D Q E+
Sbjct: 154 LSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKLLKHYQWKRVGTLTQDVQRFSEVRN 213
Query: 77 SLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKAN 136
LT L D + S +D + KL R+ + ++ +++F A
Sbjct: 214 DLTGVLYGEDIEISDTESFS----NDPCTS-VKKLKGNDVRIILGQFDQNMAAKVFCCAY 268
Query: 137 EIGLMNKGCVWIMTDGM-----------TNLLRTLEPSVIDSMQGVIGVGPHVPKTKALE 185
E + WI+ N R L +++ +M+G IGV +K ++
Sbjct: 269 EENMYGSKYQWIIPGWYEPSWWEQVHTEANSSRCLRKNLLAAMEGYIGVDFEPLSSKQIK 328
Query: 186 NFRVRWKRNFLQE-NPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
+ + + +E N V + F AYD +A+ +++A + + S
Sbjct: 329 TISGKTPQQYEREYNNKRSGVGPSKFHGYAYDGIWVIAKTLQRA------METLHASSRH 382
Query: 245 TDLEAFGISQN--GPKLLQALSSTRFKGLTGDYIFVDGQ 281
++ F + + G +L A++ T F G+TG +F +G+
Sbjct: 383 QRIQDFNYTDHTLGKIILNAMNETNFFGVTGQVVFRNGE 421
>UNIPROTKB|F1MIZ5 [details] [associations]
symbol:GABBR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043005 "neuron projection" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR000337 InterPro:IPR002455
InterPro:IPR002457 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 PRINTS:PR00248 PRINTS:PR01176 PRINTS:PR01178
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0005737 GO:GO:0043005 InterPro:IPR001828
GO:GO:0004965 GeneTree:ENSGT00530000063129 EMBL:DAAA02023255
EMBL:DAAA02023256 EMBL:DAAA02023257 EMBL:DAAA02023258
EMBL:DAAA02023259 IPI:IPI00701390 Ensembl:ENSBTAT00000018355
OMA:NMFGSKY Uniprot:F1MIZ5
Length = 835
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 65/279 (23%), Positives = 118/279 (42%)
Query: 18 LSFSATSPSLTSIRS-PYFFRGSLNDSSQAGAITAIIKAFGWREAVPIYVDNQYGEEMIP 76
LSF+AT+P L + PYFFR +D++ AI ++K + WR + D Q E+
Sbjct: 48 LSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKLLKHYQWRRVGTLTQDVQRFSEVRN 107
Query: 77 SLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKAN 136
LT L D + S +D + KL R+ + ++ +++F A
Sbjct: 108 DLTGVLYGEDIEISDTESFS----NDPCTS-VKKLKGNDVRIILGQFDQNMAAKVFCCAY 162
Query: 137 EIGLMNKGCVWIM-----------TDGMTNLLRTLEPSVIDSMQGVIGVGPHVPKTKALE 185
E + WI+ N R L ++ +M+G IGV +K ++
Sbjct: 163 EENMYGSKYQWIIPGWYEPSWWEQVHAEANSSRCLRKHLLAAMEGYIGVDFEPLSSKQIK 222
Query: 186 NFRVRWKRNFLQE-NPSIVDVELNIFGLLAYDATRALAEAVEKAGITSFGFDKTNVSRNA 244
+ + + +E N V + F AYD +A+ +++A + + S
Sbjct: 223 TISGKTPQQYEREYNNKRSGVGPSKFHGYAYDGIWVIAKTLQRA------METLHASSRH 276
Query: 245 TDLEAFGISQN--GPKLLQALSSTRFKGLTGDYIFVDGQ 281
++ F + + G +L A++ T F G+TG +F +G+
Sbjct: 277 QRIQDFNYTDHTLGKIILNAMNETNFFGVTGQVVFRNGE 315
>UNIPROTKB|F8W7X3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01010383
ProteinModelPortal:F8W7X3 SMR:F8W7X3 PRIDE:F8W7X3
Ensembl:ENST00000309434 PhylomeDB:F8W7X3 ArrayExpress:F8W7X3
Bgee:F8W7X3 Uniprot:F8W7X3
Length = 920
Score = 152 (58.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 377 GYCVDVFKAVIQELPYAVAYDFVPYGQPDGSSS-GSYNDLVYQVFLGEFDAVVGDITIVF 435
GYC+D+ K + L + VP G+ + G +N +V ++ D V +TI +
Sbjct: 479 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 538
Query: 436 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTXXXX----------X 485
R +DF+ P+ G+S++ + + FL PL+ D+W+
Sbjct: 539 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 598
Query: 486 XXXXXXXWVLEHRVNEDFRGPAGQ-QVGTSFWFSFSTMVFSQRERVISNLA-RIVVIVWC 543
W H N D + SFWF ++ E + L+ RIV +W
Sbjct: 599 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 658
Query: 544 FVVLILTQSY 553
F LI+ SY
Sbjct: 659 FFTLIIISSY 668
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 27/127 (21%), Positives = 53/127 (41%)
Query: 11 NKSQVPILSFSATSPSLTSIRSPYFFRGSLND-SSQAGAITAIIKAFGWREAVPIYVDNQ 69
N +VP + PS+ + F+ D ++ + AI ++ + W+ +Y D+
Sbjct: 124 NALEVPHIQTRWKHPSVDN--KDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDST 181
Query: 70 YGEEMIPSLTDALQAIDTRVPYRSVIS------PLATDDQIEKELYKLF--TMQTRVFIL 121
G + L A + ++ R + S PL + + KE Y +F + +T IL
Sbjct: 182 -GLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEIL 240
Query: 122 HMLPSLG 128
+ +G
Sbjct: 241 KQILFMG 247
Score = 42 (19.8 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 229 GITS-FGFDKTNVSRNATDLEAFGISQNG 256
G+T F+KTN R DL+ + + G
Sbjct: 373 GLTGHITFNKTNGLRKDFDLDIISLKEEG 401
Score = 40 (19.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 235 FDKTNVSRNATDLEAFGISQN-GPKLLQALSSTR 267
FD SR A D A G++ GP ++S+ +
Sbjct: 87 FDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ 120
WARNING: HSPs involving 56 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 852 791 0.00096 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 306
No. of states in DFA: 628 (67 KB)
Total size of DFA: 402 KB (2194 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.81u 0.11s 59.92t Elapsed: 00:00:03
Total cpu time: 59.90u 0.11s 60.01t Elapsed: 00:00:03
Start: Fri May 10 14:33:19 2013 End: Fri May 10 14:33:22 2013
WARNINGS ISSUED: 2