Query 003055
Match_columns 852
No_of_seqs 205 out of 1156
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 11:40:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003055.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003055hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 6E-248 2E-252 2123.3 48.7 739 1-850 104-879 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 7E-225 2E-229 1937.1 58.8 736 1-852 76-822 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 9E-224 3E-228 1922.7 53.5 725 1-848 66-796 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 1E-220 4E-225 1896.8 53.1 721 1-852 67-794 (796)
5 3vue_A GBSS-I, granule-bound s 99.4 1E-12 3.5E-17 148.1 10.8 275 450-844 230-508 (536)
6 2qzs_A Glycogen synthase; glyc 97.8 0.00022 7.5E-09 76.8 15.1 138 563-730 280-424 (485)
7 1rzu_A Glycogen synthase 1; gl 97.7 0.00043 1.5E-08 74.5 15.8 183 564-841 281-470 (485)
8 3nb0_A Glycogen [starch] synth 97.7 0.00043 1.5E-08 81.5 15.3 219 451-720 250-559 (725)
9 3fro_A GLGA glycogen synthase; 97.1 0.0031 1.1E-07 65.7 12.5 130 571-730 248-378 (439)
10 2x6q_A Trehalose-synthase TRET 97.1 0.0033 1.1E-07 66.1 12.0 134 571-730 227-364 (416)
11 3s28_A Sucrose synthase 1; gly 97.0 0.0024 8.3E-08 76.3 11.1 144 566-731 563-714 (816)
12 3okp_A GDP-mannose-dependent a 96.8 0.0073 2.5E-07 62.1 11.8 130 571-731 194-328 (394)
13 3oy2_A Glycosyltransferase B73 96.8 0.0065 2.2E-07 63.7 11.3 125 574-720 183-314 (413)
14 3c48_A Predicted glycosyltrans 96.6 0.0071 2.4E-07 63.7 10.0 137 571-731 239-375 (438)
15 2f9f_A First mannosyl transfer 96.5 0.0048 1.6E-07 58.3 7.5 135 568-734 16-150 (177)
16 2jjm_A Glycosyl transferase, g 96.4 0.0064 2.2E-07 63.4 8.4 128 571-731 207-334 (394)
17 2r60_A Glycosyl transferase, g 96.4 0.012 4.2E-07 63.7 10.6 136 571-731 258-408 (499)
18 2bfw_A GLGA glycogen synthase; 96.2 0.016 5.5E-07 54.6 9.1 135 564-731 28-164 (200)
19 2gek_A Phosphatidylinositol ma 95.4 0.037 1.3E-06 57.2 8.8 125 574-730 207-332 (406)
20 2iw1_A Lipopolysaccharide core 95.0 0.029 1E-06 57.3 6.3 128 571-730 192-319 (374)
21 3qhp_A Type 1 capsular polysac 95.0 0.088 3E-06 48.1 8.9 112 576-719 3-116 (166)
22 2iuy_A Avigt4, glycosyltransfe 93.4 0.12 4E-06 52.9 6.8 129 574-735 161-297 (342)
23 2vsy_A XCC0866; transferase, g 89.3 3.1 0.00011 45.7 12.9 104 577-709 378-482 (568)
24 1uqt_A Alpha, alpha-trehalose- 86.7 9.5 0.00033 42.7 15.1 142 574-731 254-403 (482)
25 3beo_A UDP-N-acetylglucosamine 83.6 2.8 9.5E-05 42.9 8.3 124 573-733 204-329 (375)
26 1vgv_A UDP-N-acetylglucosamine 83.5 8 0.00027 39.7 11.7 64 659-732 264-328 (384)
27 1f0k_A MURG, UDP-N-acetylgluco 53.7 35 0.0012 34.7 8.2 98 576-712 185-283 (364)
28 2x0d_A WSAF; GT4 family, trans 52.5 32 0.0011 37.1 8.2 122 575-731 241-363 (413)
29 3t5t_A Putative glycosyltransf 44.5 64 0.0022 36.7 9.2 137 575-731 281-422 (496)
30 2hy7_A Glucuronosyltransferase 35.6 1E+02 0.0036 32.8 8.7 106 576-731 223-336 (406)
31 1v4v_A UDP-N-acetylglucosamine 29.5 3.2E+02 0.011 27.7 10.9 52 659-717 256-308 (376)
32 3s4e_A Dual specificity protei 22.1 94 0.0032 28.2 4.7 37 244-284 82-121 (144)
33 3d4u_A Tafia, carboxypeptidase 20.5 3E+02 0.01 28.5 8.7 68 618-686 58-147 (309)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=6.2e-248 Score=2123.32 Aligned_cols=739 Identities=49% Similarity=0.858 Sum_probs=704.1
Q ss_pred CcccCCcchHHHHHhcCcHHHH-------------HHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCC
Q 003055 1 MEFLQGRALLNAIGNLGLTGAY-------------AEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYP 67 (852)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~-------------~eal~~lg~~le~~~~~E~da~LgnGGLGrLAacfldS~a~L~~P 67 (852)
|||||||+|.|||+||||.+.+ ++||++||+++|+|+++|+||+|||||||||||||||||||||+|
T Consensus 104 ~EFL~Gr~L~n~l~nlg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP 183 (879)
T 1ygp_A 104 LEFLMGRALDNALINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIP 183 (879)
T ss_dssp SCCCCBCHHHHHHHSCCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhhhHHHHHHHhcCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCC
Confidence 7999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCcceeEEecCCceeeecccccccCCCcccccCCceeeeecCCeeee--CC-CCCe--eeeCCeeEEEEEEe
Q 003055 68 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVP--GS-DGKS--HWIGGEDIKAVAYD 142 (852)
Q Consensus 68 ~~GyGlrY~yG~F~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~--~~-~G~~--~w~~~~~v~A~~yd 142 (852)
++||||||+||||+|+|.||||+|.||+||..|||||++|++.+++|+|+|+++. +. +|+. .|++++.|+|+|||
T Consensus 184 ~~GyGlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD 263 (879)
T 1ygp_A 184 AWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYD 263 (879)
T ss_dssp EEEEEECCSSCSCEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEE
T ss_pred eEEEEeeecCCceEEEeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999983 34 6755 49999999999999
Q ss_pred ecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhHHHHHhccccccCccccccCCCCCcccchhhhhhhhhhhhchH
Q 003055 143 IPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKVPICYILYPGDESVEGKVLRLKQQYTLCSASL 222 (852)
Q Consensus 143 ~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~g~y~~a~~~~~~~e~r~It~~LYp~D~~~~GkelRLkQeyfl~sasl 222 (852)
+|||||+|+++|+||||+++++. .|||+.||.|||.+|+++++.+++ ||++|||+|++++||+|||||||||||||+
T Consensus 264 ~Pi~Gy~~~~~n~lRLW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~--IT~vLYp~D~~~~GkeLRLkQEyfl~sa~l 340 (879)
T 1ygp_A 264 FPVPGFKTSNVNNLRLWQARPTT-EFDLNKFNNGDYKNSVAQQQRAES--ITAVLYPNDNFAQGKELRLKQQYFWCAASL 340 (879)
T ss_dssp EEEECSSCCCEEEEEEEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHH--HHHSSSCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCCceEEEEEEEeccCc-ccchhhccCccHhHhhhChHhhhc--hhccCCCCCCCccchhhheehhhhhhhhHH
Confidence 99999999999999999999555 899999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCH
Q 003055 223 QDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 302 (852)
Q Consensus 223 qdiirrf~~~~gG~~~l~~l~~~~~ihlNDtHpalai~ELmR~Lid~~gl~w~eAw~i~~~~~~fTnHT~vpealEkw~~ 302 (852)
|||||+|++.++ +|+.||++++|||||||||||||||||+|+|++|++|++||+||+++|+||||||||||||+||+
T Consensus 341 qdilr~~~~~~~---~l~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv 417 (879)
T 1ygp_A 341 HDILRRFKKSKR---PWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPR 417 (879)
T ss_dssp HHHHHHHHHHTC---CGGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEH
T ss_pred HHHHHHHHHhCC---ChhhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCH
Confidence 999999999873 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccC
Q 003055 303 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDE 382 (852)
Q Consensus 303 ~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (852)
+||+++||||++||++||.+|++.+..+||+ +.+++.+|+||+
T Consensus 418 ~l~~~lLpr~~~II~ein~~f~~~~~~~~~~-----d~~~~~~l~ii~-------------------------------- 460 (879)
T 1ygp_A 418 RLFGHLLPRHLEIIYDINWFFLEDVAKKFPK-----DVDLLSRISIIE-------------------------------- 460 (879)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT-----CTHHHHHHCSEE--------------------------------
T ss_pred HHHHHHCCcHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHhcceec--------------------------------
Confidence 9999999999999999999999999999998 899999999987
Q ss_pred CCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccC
Q 003055 383 EGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGS 462 (852)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S 462 (852)
+ ++++++||||+||+++|
T Consensus 461 ------------------------------------------------------------~--~~~~~~v~MA~LAi~~S 478 (879)
T 1ygp_A 461 ------------------------------------------------------------E--NSPERQIRMAFLAIVGS 478 (879)
T ss_dssp ------------------------------------------------------------C--CSSSCEEEHHHHHHHHE
T ss_pred ------------------------------------------------------------c--CCCcceeehHHHHHHhc
Confidence 1 01236899999999999
Q ss_pred cchhHHHHHHHHHHhHhhhhhhhhhcCC-CcccccccccccccccccChhHHHHHHhhcCC--CccccCcchHHHhhhcC
Q 003055 463 HAVNGVAEIHSEIVTNEVFNEFYKLWPE-KFQNKTNGVTPRRWIRFCNPDLSSILTSWLGT--EDWVTNTGKLAELRKFA 539 (852)
Q Consensus 463 ~~vNGVS~lHsei~k~~~f~~f~~l~P~-kf~n~TNGVt~rrWl~~~Np~L~~Li~~~ig~--~~W~~d~~~l~~l~~~~ 539 (852)
|+|||||+||++|+|++||++|+++||+ ||+|||||||+|||+.+|||+|++||+++||+ ++|.+++++|++|++++
T Consensus 479 ~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~ 558 (879)
T 1ygp_A 479 HKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYV 558 (879)
T ss_dssp EEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGG
T ss_pred CceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhC
Confidence 9999999999999999999999999999 99999999999999999999999999999993 49999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcCC-----CCcccccccccccccccccchhhhHHHHHHHHHhcC-----
Q 003055 540 DNEDLQSQFRAAKRNNKMKVVSFIKEKT-GYSVS-----PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMS----- 608 (852)
Q Consensus 540 ~D~~f~~~~~~vK~~nK~~L~~~I~~~~-g~~ld-----pdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~----- 608 (852)
+|++|+++|+++|++||.+|++||++++ |+.|| |++|||||||||||||||+||+|++++||.+||+ +
T Consensus 559 ~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~ 637 (879)
T 1ygp_A 559 EDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGA 637 (879)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-CccccC
Confidence 9999999999999999999999999999 99999 9999999999999999999999999999999997 5
Q ss_pred -hhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCC
Q 003055 609 -AVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTA 687 (852)
Q Consensus 609 -~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~a 687 (852)
|....++++||||||||||||+|.+||.|||+|++||++||+||+++++||||||||||||+||+||||||||+|||||
T Consensus 638 ~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqista 717 (879)
T 1ygp_A 638 SIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTA 717 (879)
T ss_dssp CHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCT
T ss_pred CCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCC
Confidence 5422244789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccchhhcccceEeeecccccccccccccccceEecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCC
Q 003055 688 GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFG 767 (852)
Q Consensus 688 g~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~FG~~~~ev~~l~~~~~~~~~~~~~~~~~v~d~i~~g~f~ 767 (852)
|+||||||||||||||+|||||||||||||+++||+||+|+||++++||..+|.+++...|..+|.+++|+|+|.+|.|+
T Consensus 718 g~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~ 797 (879)
T 1ygp_A 718 GTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFS 797 (879)
T ss_dssp TCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCC
T ss_pred CccccCchhhHHHHcCCeeeecccchhHHHHHHcCcccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999998777788999999999999999997
Q ss_pred cc---cHHHHHHHhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHh-HHHHHHHHhhhcCCCCChhHHHHHHHHHH
Q 003055 768 SY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKFSSDRTIQEYARDI 843 (852)
Q Consensus 768 ~~---~~~~l~~~L~~~~~~~~~D~y~vlaDF~sY~~aQ~~v~~~Y~d~~-~W~~~~i~niA~sg~FSSDRtI~eYa~~i 843 (852)
+. +|++||++|+.+ +|+|||++||+||++||++|+++|.|++ +|++|||.|||+||+|||||||+|||++|
T Consensus 798 ~~~~~~f~~l~~~L~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~~I 872 (879)
T 1ygp_A 798 PENPNEFKPLVDSIKYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTI 872 (879)
T ss_dssp TTSTTTTHHHHHHHHHS-----TTTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHhcC-----CCeEEEeccHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHHHHHHh
Confidence 64 499999999865 7999999999999999999999999999 99999999999999999999999999999
Q ss_pred hcccccC
Q 003055 844 WNIIPVE 850 (852)
Q Consensus 844 w~i~p~~ 850 (852)
|+++|++
T Consensus 873 W~~~p~~ 879 (879)
T 1ygp_A 873 WNVEPVT 879 (879)
T ss_dssp TCCCCC-
T ss_pred hCCCCCC
Confidence 9999964
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=7.2e-225 Score=1937.14 Aligned_cols=736 Identities=46% Similarity=0.841 Sum_probs=694.5
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003055 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (852)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAacfldS~a~L~~P~~GyGlrY~yG~F 80 (852)
|||||||+|.|||+|||+++++++||++||+++|+|+++|+||||||||||||||||||||||||+|++||||||+||||
T Consensus 76 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F 155 (824)
T 2gj4_A 76 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIF 155 (824)
T ss_dssp SCEEEECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSC
T ss_pred hhhcchhhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003055 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (852)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (852)
+|+|+||||+|.||+||..|||||++|++.+++|+|+|+++.+.+|. .|++++.|+|+|||+|||||+|++||+||||+
T Consensus 156 ~Q~i~dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~ 234 (824)
T 2gj4_A 156 NQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWS 234 (824)
T ss_dssp EEEEETTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEE
T ss_pred eEEeeCCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEE
Confidence 99999999999999999999999999999999999999998666783 79999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhccccccCccccccCCCCCcccchhhhhhhhhhhhchHHHHHHHHHHhcCcc----
Q 003055 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKVPICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGAN---- 236 (852)
Q Consensus 161 a~v~~~~fdl~~fn~g~y~~a~~~~~~~e~r~It~~LYp~D~~~~GkelRLkQeyfl~saslqdiirrf~~~~gG~---- 236 (852)
++ ++++|||..||.|+|..|+.+++.+|+ ||++|||+|++++||+|||||||||||||+|||||+|++.+.|.
T Consensus 235 a~-~~~~f~~~~fn~G~~~~a~~d~~~~en--It~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~ 311 (824)
T 2gj4_A 235 AK-APNDFNLKDFNVGGYIQAVLDRNLAEN--ISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPV 311 (824)
T ss_dssp EE-CCC----------CHHHHHHTHHHHHG--GGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred ee-cCcccchhhccCccHHHHHhcccchhh--cCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhcccccccc
Confidence 99 778999999999999999999999999 99999999999999999999999999999999999999875332
Q ss_pred -cccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHH
Q 003055 237 -VNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEI 315 (852)
Q Consensus 237 -~~l~~l~~~~~ihlNDtHpalai~ELmR~Lid~~gl~w~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLprh~~I 315 (852)
.+|+.||++++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++|
T Consensus 312 ~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~i 391 (824)
T 2gj4_A 312 RTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQI 391 (824)
T ss_dssp --CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHH
T ss_pred ccchhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHH
Confidence 3799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhh
Q 003055 316 IEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQ 395 (852)
Q Consensus 316 I~~In~~f~~~i~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (852)
|++||.+|+..+..++|+ +.+++.++++++
T Consensus 392 i~~in~~f~~~~~~~~~~-----~~~~~~~~~~i~--------------------------------------------- 421 (824)
T 2gj4_A 392 IYEINQRFLNRVAAAFPG-----DVDRLRRMSLVE--------------------------------------------- 421 (824)
T ss_dssp HHHHHHHHHHHHHHHSTT-----CHHHHHHHCSEE---------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCC-----cHHHHHhhhhhh---------------------------------------------
Confidence 999999999999999998 788888999876
Q ss_pred cccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHH
Q 003055 396 EDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEI 475 (852)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S~~vNGVS~lHsei 475 (852)
+ +..+.||||+||+++||+|||||++|+++
T Consensus 422 -----------------------------------------------~---~~~~~vnMa~lai~~S~~VNgVS~lH~e~ 451 (824)
T 2gj4_A 422 -----------------------------------------------E---GAVKRINMAHLCIAGSHAVNGVARIHSEI 451 (824)
T ss_dssp -----------------------------------------------C---SSSCEEEHHHHHHHTCSCEEESSHHHHHH
T ss_pred -----------------------------------------------h---cCCCcccHHHHHHHhcCceeeEcHHHHHH
Confidence 2 23468999999999999999999999999
Q ss_pred HhHhhhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHH
Q 003055 476 VTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNN 555 (852)
Q Consensus 476 ~k~~~f~~f~~l~P~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~n 555 (852)
+|+.+|++|+++||++|+|||||||+|||+.+|||+++++|++.||+ +|.+++++|++|.++++|++|+++|+++|++|
T Consensus 452 ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~-~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~n 530 (824)
T 2gj4_A 452 LKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGE-EYISDLDQLRKLLSYVDDEAFIRDVAKVKQEN 530 (824)
T ss_dssp HHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCS-GGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHH
T ss_pred HhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCc-hhhhCHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999996 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHH
Q 003055 556 KMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAK 635 (852)
Q Consensus 556 K~~L~~~I~~~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK 635 (852)
|.+|+++|++++|..+||+++||+|||||||||||+||+|++++||.+|++ +|.. .++|+||||||||||+|.+||
T Consensus 531 K~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~-~~~~---~~~p~q~If~GKA~P~y~~aK 606 (824)
T 2gj4_A 531 KLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNK---FVVPRTVMIGGKAAPGYHMAK 606 (824)
T ss_dssp HHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTS---CCCCEEEEEECCCCTTCHHHH
T ss_pred HHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHh-CCCC---CCCCEEEEEEEeCCHhHHHHH
Confidence 999999999999999999999999999999999999999999999999997 6553 377999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccc
Q 003055 636 RIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 715 (852)
Q Consensus 636 ~iIk~I~~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanv 715 (852)
.|||+|+++|+++|+||+++++|||||+|||||++|++|+||||||+||||||+||||||||||||||+|||||+|||||
T Consensus 607 ~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanv 686 (824)
T 2gj4_A 607 MIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANV 686 (824)
T ss_dssp HHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHH
T ss_pred HHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccceEecccchhhhhhhhhhcCCC---CCCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCcc
Q 003055 716 EIRQEVGEENFFLFGARAHEIAGLRKERSEG---KFVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADY 789 (852)
Q Consensus 716 Ei~e~vg~eN~f~FG~~~~ev~~l~~~~~~~---~~~~~~~~~~v~d~i~~g~f~~~---~~~~l~~~L~~~~~~~~~D~ 789 (852)
||.++||.+|+|+||..++++..++.++ +. .|..++.++++++.+.+|.|+.. .|.+||++|.. +|+
T Consensus 687 Ei~e~vG~~Ngf~FG~~~~ev~~l~~~~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~ 759 (824)
T 2gj4_A 687 EMAEEAGEENFFIFGMRVEDVDRLDQRG-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDR 759 (824)
T ss_dssp HHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCT
T ss_pred hhhhccCCCCEEEeCCcHHHHHHHHHcC-CCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHc------CCh
Confidence 9999999999999999999998886654 33 26678999999999999999754 49999999986 599
Q ss_pred cccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChhHHHHHHHHHHhcccccCCC
Q 003055 790 FLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 852 (852)
Q Consensus 790 y~vlaDF~sY~~aQ~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p~~~p 852 (852)
|||++||+||++||++|+++|.|+++|++||+.|||.+|+|||||||+|||++||+++|++.|
T Consensus 760 ~~~~~Df~~y~~~q~~v~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~iw~~~~~~~~ 822 (824)
T 2gj4_A 760 FKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQR 822 (824)
T ss_dssp TCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCCC
T ss_pred hhhhhhHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998765
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=9.1e-224 Score=1922.67 Aligned_cols=725 Identities=45% Similarity=0.782 Sum_probs=699.3
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003055 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (852)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAacfldS~a~L~~P~~GyGlrY~yG~F 80 (852)
|||||||+|.|||+|||+++++++||++||+++++++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 66 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F 145 (796)
T 1l5w_A 66 MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLF 145 (796)
T ss_dssp SCCCCCCCHHHHHHHHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSC
T ss_pred hHHhHHHHHHHHHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCce
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003055 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (852)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (852)
+|+|.||||+|.||+|+..|+|||++|++.+|+|+|+|+++. + + +|++++.|+|+|||+|||||+|+++|+||||+
T Consensus 146 ~Q~i~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~ 221 (796)
T 1l5w_A 146 RQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQ 221 (796)
T ss_dssp EEEEETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEE
T ss_pred eEEecCCeeEEecCccccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEE
Confidence 999999999999999999999999999999999999999984 2 4 79999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhccccccCccccccCCCCCcccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccc
Q 003055 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKVPICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWE 240 (852)
Q Consensus 161 a~v~~~~fdl~~fn~g~y~~a~~~~~~~e~r~It~~LYp~D~~~~GkelRLkQeyfl~saslqdiirrf~~~~gG~~~l~ 240 (852)
++++. .|||+.||.|||.+|+++++.+++ ||++|||+|++++||+||||||||||+||+|+|+|+|+++++ +|+
T Consensus 222 a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~--It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~~~ 295 (796)
T 1l5w_A 222 ATHAH-PFDLTKFNDGDFLRAEQQGINAEK--LTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR---KLH 295 (796)
T ss_dssp EECSS-CCCHHHHHTTCTTGGGHHHHHHHG--GGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CGG
T ss_pred eccCc-ccChhhcCCccHhhhhhchHhHhh--hhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC---Chh
Confidence 99655 799999999999999999999999 999999999999999999999999999999999999999873 788
Q ss_pred cCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHHh
Q 003055 241 EFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMID 320 (852)
Q Consensus 241 ~l~~~~~ihlNDtHpalai~ELmR~Lid~~gl~w~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLprh~~II~~In 320 (852)
.||++.+||||||||||++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||
T Consensus 296 ~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~ 375 (796)
T 1l5w_A 296 ELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEIN 375 (796)
T ss_dssp GHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhccccc
Q 003055 321 EELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVL 400 (852)
Q Consensus 321 ~~f~~~i~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (852)
.+|++.+..++|+ +.+++.+++++.
T Consensus 376 ~~f~~~~~~~~~~-----~~~~~~~~~i~~-------------------------------------------------- 400 (796)
T 1l5w_A 376 TRFKTLVEKTWPG-----DEKVWAKLAVVH-------------------------------------------------- 400 (796)
T ss_dssp HHHHHHHHHHSTT-----CHHHHHHHCSEE--------------------------------------------------
T ss_pred HHHHHHHHHhcCC-----cHHHHhhhhccc--------------------------------------------------
Confidence 9999999999998 889999998855
Q ss_pred ccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHHHhHhh
Q 003055 401 EEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEV 480 (852)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~ 480 (852)
+ +.||||+||+++||+|||||++|++++|+.+
T Consensus 401 ------------------------------------------~------~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~ 432 (796)
T 1l5w_A 401 ------------------------------------------D------KQVHMANLCVVGGFAVNGVAALHSDLVVKDL 432 (796)
T ss_dssp ------------------------------------------T------TEEEHHHHHHHHSSEEEESSHHHHHHHHHTT
T ss_pred ------------------------------------------C------CcccHHHHHHHhcCccccccHHHHHHHHhHH
Confidence 2 4799999999999999999999999999999
Q ss_pred hhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHH
Q 003055 481 FNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVV 560 (852)
Q Consensus 481 f~~f~~l~P~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~ 560 (852)
|++|+++||+||+|||||||+|||+.+|||++++||++.+|+ +|++|++.|++|+++++|++|+++|+++|++||.+|+
T Consensus 433 f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~-~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~ 511 (796)
T 1l5w_A 433 FPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK-EWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLA 511 (796)
T ss_dssp SHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSS-CCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCc-ccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999996 9999999999999999999999998899999999999
Q ss_pred HHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHH
Q 003055 561 SFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKF 640 (852)
Q Consensus 561 ~~I~~~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~ 640 (852)
+||++++|..+||+++||+|||||||||||+||+|++++||.+||+ +|... ++|+||||||||||+|.+||.|||+
T Consensus 512 ~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~ 587 (796)
T 1l5w_A 512 EFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD---RVPRVFLFGAKAAPGYYLAKNIIFA 587 (796)
T ss_dssp HHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHT-CTTCC---CCCEEEEEECCCCTTCHHHHHHHHH
T ss_pred HHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhc-CCCCC---CCCeEEEEEecCChhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997 66643 6899999999999999999999999
Q ss_pred HHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 003055 641 ITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 720 (852)
Q Consensus 641 I~~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~ 720 (852)
|+++|++||+||+++++|||||+|||||++|++|+||||||+||||||+||||||||||||||+|+|||||||||||.++
T Consensus 588 i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~ 667 (796)
T 1l5w_A 588 INKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK 667 (796)
T ss_dssp HHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH
T ss_pred HHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEecccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCccccccc
Q 003055 721 VGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGK 794 (852)
Q Consensus 721 vg~eN~f~FG~~~~ev~~l~~~~~~~~---~~~~~~~~~v~d~i~~g~f~~~---~~~~l~~~L~~~~~~~~~D~y~vla 794 (852)
+|++|+|+||.+++||..++..+ +.. |..+|.++++++.+.+|.|+.. +|.+||++|+.+ ++|+|+|++
T Consensus 668 vG~~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~----~~D~~~v~~ 742 (796)
T 1l5w_A 668 VGEENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQ----GGDPYLVMA 742 (796)
T ss_dssp HCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTSTT----TCCTTCHHH
T ss_pred cCCCcEEEecCCHHHHHHHHHcc-cCHHHHhhcCHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHhcc----CCCceeehh
Confidence 99999999999999999999875 332 5678899999999999999754 499999999851 159999999
Q ss_pred chhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChhHHHHHHHHHHhcccc
Q 003055 795 DFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 848 (852)
Q Consensus 795 DF~sY~~aQ~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p 848 (852)
||+||++||++|+++|.|+++|++||+.|||+||+|||||||+|||++||+++|
T Consensus 743 Df~~y~~~q~~v~~~Y~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~P 796 (796)
T 1l5w_A 743 DFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR 796 (796)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGGBHHHHHHHHHHHTTTSCC
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999999999999987
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=1.1e-220 Score=1896.84 Aligned_cols=721 Identities=45% Similarity=0.754 Sum_probs=689.9
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003055 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (852)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAacfldS~a~L~~P~~GyGlrY~yG~F 80 (852)
|||||||+|.|||+|||+++++++||++||+++++++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 67 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F 146 (796)
T 2c4m_A 67 AEFLMGRALLNNLTNLGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLF 146 (796)
T ss_dssp SCCCCBCSHHHHHHHTTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSC
T ss_pred hhhcchhhhhhHHHhcccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003055 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (852)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (852)
+|+|.||||+|.||+|+..|+|||++|++.+++|+|+|+ .|.|+|||+|||||+|+++|+||||+
T Consensus 147 ~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~ 211 (796)
T 2c4m_A 147 RQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWK 211 (796)
T ss_dssp EEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEE
T ss_pred EEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEe
Confidence 999999999999999999999999999999999999975 46789999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhccccccCccccccCCCCCcccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccc
Q 003055 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKVPICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWE 240 (852)
Q Consensus 161 a~v~~~~fdl~~fn~g~y~~a~~~~~~~e~r~It~~LYp~D~~~~GkelRLkQeyfl~saslqdiirrf~~~~gG~~~l~ 240 (852)
++ +.+.|||+.||.|||.+|+++++.+++ ||++|||+|++++||+||||||||||+||+|+|+|+|++.+| +|+
T Consensus 212 a~-~~~~f~l~~fn~gdy~~a~~~~~~~~~--It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~l~ 285 (796)
T 2c4m_A 212 AE-PWEEFDYDAFNAQRFTDAIIERERVSD--ICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK---DLS 285 (796)
T ss_dssp EE-ESSSSCHHHHHTTCHHHHHHHHHHHHH--HHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---CST
T ss_pred cc-cccccchhhccCcchhhhhhchHhhhc--hhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC---Chh
Confidence 99 445899999999999999999999999 999999999999999999999999999999999999999874 688
Q ss_pred cCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHHh
Q 003055 241 EFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMID 320 (852)
Q Consensus 241 ~l~~~~~ihlNDtHpalai~ELmR~Lid~~gl~w~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLprh~~II~~In 320 (852)
.||++.+||||||||||++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||
T Consensus 286 ~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~ 365 (796)
T 2c4m_A 286 NFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEID 365 (796)
T ss_dssp THHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhccccc
Q 003055 321 EELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVL 400 (852)
Q Consensus 321 ~~f~~~i~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (852)
.+|+..+..+ |+ +.+++.+++++.
T Consensus 366 ~~~~~~~~~~-~~-----~~~~~~~~~i~~-------------------------------------------------- 389 (796)
T 2c4m_A 366 RRFRLERAAD-GL-----DEETINRMAPIQ-------------------------------------------------- 389 (796)
T ss_dssp HHHHHHHHHT-TC-----CHHHHHHHCSEE--------------------------------------------------
T ss_pred HHHHHHHHhc-CC-----cHhhhhccccee--------------------------------------------------
Confidence 9999999999 98 899999998855
Q ss_pred ccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHHHhHhh
Q 003055 401 EEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEV 480 (852)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~ 480 (852)
+ +.||||+||+++||+|||||++|++++|+.+
T Consensus 390 ------------------------------------------~------~~vnMa~lai~~S~~VNgVS~lHae~ik~~~ 421 (796)
T 2c4m_A 390 ------------------------------------------H------GTVHMAWIACYAAYSINGVAALHTEIIKAET 421 (796)
T ss_dssp ------------------------------------------T------TEEEHHHHHHHHCSEEEESSHHHHHHHHHTT
T ss_pred ------------------------------------------C------CcccHHHHHHHhcCceeeccHHHHHHhhhhh
Confidence 2 4799999999999999999999999999999
Q ss_pred hhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHH
Q 003055 481 FNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVV 560 (852)
Q Consensus 481 f~~f~~l~P~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~ 560 (852)
|++|+++||+||+|||||||+|||+.+|||++++||++.+|+++|.+|+++|++|.++++|++|+++|+++|++||.+|+
T Consensus 422 f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~ 501 (796)
T 2c4m_A 422 LADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFA 501 (796)
T ss_dssp THHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999448999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHH
Q 003055 561 SFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKF 640 (852)
Q Consensus 561 ~~I~~~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~ 640 (852)
+||++++|..+||+++||+|||||||||||+||+|++++||.+||+ +|... ++|+||||||||||+|.+||.|||+
T Consensus 502 ~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~ 577 (796)
T 2c4m_A 502 EWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE-DGLTD---IPARTVIFGAKAAPGYVRAKAIIKL 577 (796)
T ss_dssp HHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHT-SCCCS---SCCEEEEEECCCCTTCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhh-CCCCC---CCCeEEEEEecCCHhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997 66533 6899999999999999999999999
Q ss_pred HHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 003055 641 ITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 720 (852)
Q Consensus 641 I~~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~ 720 (852)
|+++|++||+||+++++|||||+|||||++|++|+||||||+||||||+||||||||||||||+|+|||||||||||.++
T Consensus 578 i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~ 657 (796)
T 2c4m_A 578 INSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDS 657 (796)
T ss_dssp HHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHH
T ss_pred HHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEecccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCccccccc
Q 003055 721 VGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGK 794 (852)
Q Consensus 721 vg~eN~f~FG~~~~ev~~l~~~~~~~~---~~~~~~~~~v~d~i~~g~f~~~---~~~~l~~~L~~~~~~~~~D~y~vla 794 (852)
+|++|+|+||.+++++..++.. +.. |..+|.++++++.+.+|.|+.. +|.+||++|..+...+++|+|||++
T Consensus 658 vG~~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~ 735 (796)
T 2c4m_A 658 VGEENAYIFGARVEELPALRES--YKPYELYETVPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLG 735 (796)
T ss_dssp HCGGGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHHHHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHH
T ss_pred cCCCcEEEecCchhhHHHHHHh--hChHHHhhcCHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcccCCCCCcchhhh
Confidence 9999999999999999999887 443 5567899999999999999764 3999999997411112269999999
Q ss_pred chhHHHHHHHHHHHHh-cCHhHHHHHHHHhhhcCCCCChhHHHHHHHHHHhcccccCCC
Q 003055 795 DFPSYLECQEKVDEAY-CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 852 (852)
Q Consensus 795 DF~sY~~aQ~~v~~~Y-~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p~~~p 852 (852)
||+||++||++|+++| .|+++|++||+.|||+||+|||||||+|||++||+++|++.|
T Consensus 736 Df~~y~~~q~~v~~~y~~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~~~~~~ 794 (796)
T 2c4m_A 736 DFADYRETRDRMAADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPTPAV 794 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHTTCCCCCCC-
T ss_pred hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCCCCcC
Confidence 9999999999999998 999999999999999999999999999999999999998754
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.37 E-value=1e-12 Score=148.08 Aligned_cols=275 Identities=14% Similarity=0.169 Sum_probs=191.2
Q ss_pred CeeeeeeeeeccCcchhHHHHHHHHHHhHhhhhhhh----hhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 003055 450 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFY----KLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 525 (852)
Q Consensus 450 ~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f~~f~----~l~P~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~ig~~~W 525 (852)
+.+||-..++..|..|+.||.-+.+-+.+. |..-. ..-+.++.-|.|||....| ||.-.. .+.
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~----~p~~d~----~~~---- 296 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEW----DPSKDK----YIT---- 296 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTS----CTTTCS----SSS----
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhc----CCCCcc----ccc----
Confidence 578999999999999999998776633221 11000 0124578899999999999 464211 111
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHH
Q 003055 526 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 605 (852)
Q Consensus 526 ~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~I~~~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik 605 (852)
. .+.... ..+.|..+|..| +++.|...|++..+.++|-|+.++|...+ ++..+.+ |+
T Consensus 297 --~--------~~~~~~-----~~~~K~~~k~~l----~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~---l~ 353 (536)
T 3vue_A 297 --A--------KYDATT-----AIEAKALNKEAL----QAEAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPE---LM 353 (536)
T ss_dssp --C--------CCCTTT-----HHHHHHHHHHHH----HHHTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHH---HT
T ss_pred --c--------ccchhh-----hhhhhHHHHHHH----HHhcCCCCCCCCcEEEEEeeccccCChHH-HHHHHHH---hH
Confidence 0 011111 225677777665 55679999999999999999999999998 7776655 43
Q ss_pred hcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 003055 606 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 685 (852)
Q Consensus 606 ~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis 685 (852)
+ ...++++.|...+.+. ..++ ..+... .+ +|.|+..|+......+..+||+...-|
T Consensus 354 ~----------~~~~l~l~G~G~~~~~---~~~~---~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS 409 (536)
T 3vue_A 354 Q----------EDVQIVLLGTGKKKFE---KLLK---SMEEKY------PG--KVRAVVKFNAPLAHLIMAGADVLAVPS 409 (536)
T ss_dssp T----------SSCEEEEECCBCHHHH---HHHH---HHHHHS------TT--TEEEECSCCHHHHHHHHHHCSEEEECC
T ss_pred h----------hCCeEEEEeccCchHH---HHHH---HHHhhc------CC--ceEEEEeccHHHHHHHHHhhheeeccc
Confidence 2 0236777775443322 2222 222211 12 799999999999999999999999888
Q ss_pred CCccccCCCccchhhcccceEeeecccccccccccccccceEecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCC
Q 003055 686 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV 765 (852)
Q Consensus 686 ~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~FG~~~~ev~~l~~~~~~~~~~~~~~~~~v~d~i~~g~ 765 (852)
+ .|.+|.+-|-+|..|++.|+|--|...|+.++. +|+|+|+.... .. -.
T Consensus 410 ~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg--~~G~~~~~~~~-----------~g----------------~l 458 (536)
T 3vue_A 410 R--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEG--KTGFHMGRLSV-----------DC----------------KV 458 (536)
T ss_dssp S--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBT--TTEEECCCCCS-----------CT----------------TC
T ss_pred c--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCC--CCccccccCCC-----------ce----------------eE
Confidence 7 599999999999999999999999999988764 89999976311 01 02
Q ss_pred CCcccHHHHHHHhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChhHHHHHHHHHHh
Q 003055 766 FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 844 (852)
Q Consensus 766 f~~~~~~~l~~~L~~~~~~~~~D~y~vlaDF~sY~~aQ~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw 844 (852)
|.+.|.+.|.+.|. ++...|.+ +.|.+|+...++ -.||=+++.++|.+ +|
T Consensus 459 ~~~~d~~~la~ai~-------------------------ral~~~~~-~~~~~~~~~am~--~~fSW~~~A~~y~~-ly 508 (536)
T 3vue_A 459 VEPSDVKKVAATLK-------------------------RAIKVVGT-PAYEEMVRNCMN--QDLSWKGPAKNWEN-VL 508 (536)
T ss_dssp CCHHHHHHHHHHHH-------------------------HHHHHTTS-HHHHHHHHHHHH--SCCSSHHHHHHHHH-HH
T ss_pred ECCCCHHHHHHHHH-------------------------HHHHhcCc-HHHHHHHHHHHH--hcCCHHHHHHHHHH-HH
Confidence 33445666766664 44556654 579888776655 36999999999965 44
No 6
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.82 E-value=0.00022 Score=76.77 Aligned_cols=138 Identities=13% Similarity=0.119 Sum_probs=96.2
Q ss_pred HHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHH
Q 003055 563 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 642 (852)
Q Consensus 563 I~~~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 642 (852)
++++.|..-+++....+++-|+..+|...+ ++..+.+ +++ . +.++++.|...+ .....+-+++.
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~-~---------~~~l~ivG~g~~--~~~~~l~~~~~ 343 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDL-VLEALPG---LLE-Q---------GGQLALLGAGDP--VLQEGFLAAAA 343 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHH-HHHHHHH---HHH-T---------TCEEEEEEEECH--HHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHH-HHHHHHH---Hhh-C---------CcEEEEEeCCch--HHHHHHHHHHH
Confidence 345567554457889999999999999887 6665544 332 0 346777786422 12233334443
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 003055 643 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 722 (852)
Q Consensus 643 ~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg 722 (852)
+.+ + +|+|+..|.-+....++.+||+....|+ .|..|.+-+-+|.-|++.|+|-.|...|+.+...
T Consensus 344 ~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~ 409 (485)
T 2qzs_A 344 EYP----------G--QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCS 409 (485)
T ss_dssp HST----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCC
T ss_pred hCC----------C--cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCc
Confidence 321 2 6877777776666788999999998877 6999999999999999999998888887765421
Q ss_pred -------ccceEecc
Q 003055 723 -------EENFFLFG 730 (852)
Q Consensus 723 -------~eN~f~FG 730 (852)
.+|+++|.
T Consensus 410 ~~~~~~~~~~G~l~~ 424 (485)
T 2qzs_A 410 LENLADGVASGFVFE 424 (485)
T ss_dssp HHHHHTTCCCBEEEC
T ss_pred cccccccccceEEEC
Confidence 15666664
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.75 E-value=0.00043 Score=74.48 Aligned_cols=183 Identities=16% Similarity=0.147 Sum_probs=122.1
Q ss_pred HHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHH
Q 003055 564 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 643 (852)
Q Consensus 564 ~~~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~ 643 (852)
+++.|..-++ ....+++-|+..+|...+ ++..+.++ ++ . ..++++.|...+ ..-..+-+++.+
T Consensus 281 r~~~~~~~~~-~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~-~---------~~~l~ivG~g~~--~~~~~l~~~~~~ 343 (485)
T 1rzu_A 281 AEHFRIDDDG-SPLFCVISRLTWQKGIDL-MAEAVDEI---VS-L---------GGRLVVLGAGDV--ALEGALLAAASR 343 (485)
T ss_dssp HHHHTCCCSS-SCEEEEESCBSTTTTHHH-HHTTHHHH---HH-T---------TCEEEEEECBCH--HHHHHHHHHHHH
T ss_pred HHhcCCCCCC-CeEEEEEccCccccCHHH-HHHHHHHH---Hh-c---------CceEEEEeCCch--HHHHHHHHHHHh
Confidence 4455644322 347889999999999888 77666554 22 0 346888886421 122334444433
Q ss_pred HhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc--
Q 003055 644 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV-- 721 (852)
Q Consensus 644 va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~v-- 721 (852)
.. + +|+|+..|.-.....++.+||+....|. .|..|.+-+-+|.-|++.|+|-.|...|+.+..
T Consensus 344 ~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~ 409 (485)
T 1rzu_A 344 HH----------G--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANH 409 (485)
T ss_dssp TT----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCH
T ss_pred CC----------C--cEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheeccccc
Confidence 21 2 6887777876776789999999998877 699999999999999999999888888776542
Q ss_pred -----cccceEecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCcccHHHHHHHhccCCCCCCCcccccccch
Q 003055 722 -----GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDF 796 (852)
Q Consensus 722 -----g~eN~f~FG~~~~ev~~l~~~~~~~~~~~~~~~~~v~d~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~y~vlaDF 796 (852)
+.+|+++|... +.++|.+.|.
T Consensus 410 ~~~~~~~~~G~l~~~~-------------------------------------d~~~la~~i~----------------- 435 (485)
T 1rzu_A 410 AALASKAATGVQFSPV-------------------------------------TLDGLKQAIR----------------- 435 (485)
T ss_dssp HHHHTTCCCBEEESSC-------------------------------------SHHHHHHHHH-----------------
T ss_pred ccccccCCcceEeCCC-------------------------------------CHHHHHHHHH-----------------
Confidence 11466666321 2223333332
Q ss_pred hHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChhHHHHHHHH
Q 003055 797 PSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 841 (852)
Q Consensus 797 ~sY~~aQ~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~ 841 (852)
++...|.|++.|.+|.....+ -.||.+++.++|.+
T Consensus 436 --------~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ 470 (485)
T 1rzu_A 436 --------RTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAA 470 (485)
T ss_dssp --------HHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHH
T ss_pred --------HHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHH
Confidence 333345678888877766544 68999999998865
No 8
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=97.67 E-value=0.00043 Score=81.50 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=142.4
Q ss_pred eeeeeeeeeccCcchhHHHHHHHHHHhHhhhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcc
Q 003055 451 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTG 530 (852)
Q Consensus 451 ~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~ig~~~W~~d~~ 530 (852)
.++|-..+++.|..|+.||....+=++. +...-|.++ |-|||....| ||.
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNGID~~~f----~p~------------------- 299 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNGLNVIKF----QAF------------------- 299 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCCBCCCCC----SST-------------------
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCCcccccc----Ccc-------------------
Confidence 4566666888999999998877665543 223334545 9999999888 342
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC--CcCCCC-ccccccccccc-ccccccchhhhHHHHHHHHHh
Q 003055 531 KLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTG--YSVSPD-AMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKE 606 (852)
Q Consensus 531 ~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~I~~~~g--~~ldpd-slfdvq~kR~h-eYKRq~Lnil~ii~ry~~ik~ 606 (852)
.+ +++.|.++|.+|-++++.+.+ ..++++ .++..-+-|+. +-|=-.| ++..+.|+.+...
T Consensus 300 -----------~~----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~ 363 (725)
T 3nb0_A 300 -----------HE----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLK 363 (725)
T ss_dssp -----------TH----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHH
T ss_pred -----------hh----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHh
Confidence 11 447889999999999988765 567744 56666689998 6788888 8888888887632
Q ss_pred cChhhhhcccCCeEEEEeccCCCC----------------------cHHHHHHHHHHHH---------------------
Q 003055 607 MSAVERKAKFVPRVCIFGGKAFAT----------------------YVQAKRIVKFITD--------------------- 643 (852)
Q Consensus 607 ~~~~~r~~~~~P~~~IFaGKA~P~----------------------y~~aK~iIk~I~~--------------------- 643 (852)
.+...+ -+=..+|+.++..-- -.+||++.....+
T Consensus 364 ~~~~~~---~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 440 (725)
T 3nb0_A 364 VSGSKK---TVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSS 440 (725)
T ss_dssp HTTCCC---EEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHH
T ss_pred hccCCC---cEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChH
Confidence 121111 111123444432211 1123333322110
Q ss_pred -----------Hh--------------------------hhhcCCcCCCCcceEEEecCCChhh-------hhhhccccc
Q 003055 644 -----------VG--------------------------ATVNHDPEIGDLLKVIFVPDYNVSV-------AELLIPASE 679 (852)
Q Consensus 644 -----------va--------------------------~~vn~Dp~v~~~lKVvFlenY~vsl-------Ae~lipa~D 679 (852)
.. +.++-...-.++.||||+|.|-=+. -+.++.+||
T Consensus 441 ~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad 520 (725)
T 3nb0_A 441 DKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCH 520 (725)
T ss_dssp HHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCS
T ss_pred HHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhce
Confidence 00 0011112234789999999986553 356789999
Q ss_pred cccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 003055 680 LSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 720 (852)
Q Consensus 680 vs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~ 720 (852)
+...-|. .|..|..-|-+|.-|++.|.|--|--.|+..+
T Consensus 521 vfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~d 559 (725)
T 3nb0_A 521 LGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMED 559 (725)
T ss_dssp EEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHT
T ss_pred EEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhc
Confidence 9999886 79999999999999999999977765554443
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.13 E-value=0.0031 Score=65.66 Aligned_cols=130 Identities=15% Similarity=0.066 Sum_probs=91.1
Q ss_pred CCCCccccccccccc-ccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhc
Q 003055 571 VSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVN 649 (852)
Q Consensus 571 ldpdslfdvq~kR~h-eYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn 649 (852)
++++ ...+++-|+. .+|...+ ++..+.+ +++ ... ..+..+++.|...+. ....+-+++.+.+
T Consensus 248 ~~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~g~~~--~~~~l~~~~~~~~---- 310 (439)
T 3fro_A 248 MDEG-VTFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPE--LEGWARSLEEKHG---- 310 (439)
T ss_dssp CCSC-EEEEEECCSSCTTBCHHH-HHHHHHH---HHT-SGG-----GGGEEEEEECCCCHH--HHHHHHHHHHHCT----
T ss_pred CCCC-cEEEEEcccccccccHHH-HHHHHHH---HHh-ccc-----CCCeEEEEEcCCChh--HHHHHHHHHhhcC----
Confidence 4666 8899999999 9999887 7666555 432 110 125688899965422 1233333333222
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEec
Q 003055 650 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 729 (852)
Q Consensus 650 ~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~F 729 (852)
+ .|+|..-+.-+-...++.+||+....|.. |..|.+-+-+|.-|++.|+|-.|..-|+.+. .+++++
T Consensus 311 ------~--~~~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~---~~g~~~ 377 (439)
T 3fro_A 311 ------N--VKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDIITN---ETGILV 377 (439)
T ss_dssp ------T--EEEECSCCCHHHHHHHHTTCSEEEECBSC--CSSCHHHHHHHHTTCEEEEESSTHHHHHCCT---TTCEEE
T ss_pred ------C--EEEEcCCCCHHHHHHHHHHCCEEEeCCCC--CCccHHHHHHHHCCCCeEEcCCCCcceeEEc---CceEEe
Confidence 1 35555547777777889999999988874 9999999999999999999988888776642 377777
Q ss_pred c
Q 003055 730 G 730 (852)
Q Consensus 730 G 730 (852)
.
T Consensus 378 ~ 378 (439)
T 3fro_A 378 K 378 (439)
T ss_dssp C
T ss_pred C
Confidence 5
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.06 E-value=0.0033 Score=66.10 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=93.0
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHH-HHHHHHHHHHhhhhc
Q 003055 571 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQA-KRIVKFITDVGATVN 649 (852)
Q Consensus 571 ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~a-K~iIk~I~~va~~vn 649 (852)
++++....+++=|+..+|...+ ++..+.++ ++.. ....+++.|.....+... ..+-+++...+
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~~~--------~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~---- 290 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFD-VIEIYRKV---KEKI--------PGVQLLLVGVMAHDDPEGWIYFEKTLRKIG---- 290 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHH-HHHHHHHH---HHHC--------TTCEEEEEECCCTTCHHHHHHHHHHHHHHT----
T ss_pred CCCCCcEEEEEeccccccCHHH-HHHHHHHH---HHhC--------CCeEEEEEecCcccchhHHHHHHHHHHHhC----
Confidence 5677788999999999999887 76665543 3201 245788888765433222 22333333332
Q ss_pred CCcCCCCcceEEEec---CCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccce
Q 003055 650 HDPEIGDLLKVIFVP---DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 726 (852)
Q Consensus 650 ~Dp~v~~~lKVvFle---nY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~ 726 (852)
+.+ +|.|+. +++-.-...++.+||+....|+ .|..|++-+-+|.-|++.|+|--|...|+.+.. +++
T Consensus 291 ----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~--~~g 360 (416)
T 2x6q_A 291 ----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG--ETG 360 (416)
T ss_dssp ----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBT--TTE
T ss_pred ----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheecC--CCe
Confidence 123 578864 4444455678899999988776 599999999999999999999888888776543 578
Q ss_pred Eecc
Q 003055 727 FLFG 730 (852)
Q Consensus 727 f~FG 730 (852)
+++.
T Consensus 361 ~l~~ 364 (416)
T 2x6q_A 361 FLVR 364 (416)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8876
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.97 E-value=0.0024 Score=76.29 Aligned_cols=144 Identities=12% Similarity=0.051 Sum_probs=100.6
Q ss_pred HcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCC---CcHHHHHHHHHHH
Q 003055 566 KTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFIT 642 (852)
Q Consensus 566 ~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P---~y~~aK~iIk~I~ 642 (852)
..|...+++....+++-|+..+|...+ ++..+.++.+.. + ...+++.|...+ .+...+...+.+.
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~---~--------~v~LvIvG~g~~~~~~~~e~~~~~~~L~ 630 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR---E--------LANLVVVGGDRRKESKDNEEKAEMKKMY 630 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH---H--------HCEEEEECCCTTSCCCCHHHHHHHHHHH
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC---C--------CeEEEEEeCCCcccccchhhHHHHHHHH
Confidence 346666888999999999999999888 776665543321 1 246777776652 3333344444444
Q ss_pred HHhhhhcCCcCCCCcceEEEec---CC--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccc
Q 003055 643 DVGATVNHDPEIGDLLKVIFVP---DY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 717 (852)
Q Consensus 643 ~va~~vn~Dp~v~~~lKVvFle---nY--~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi 717 (852)
+.++..+ +.+ +|.|+. ++ .-.+.+.+..++|+....|. .|+.|.+-+-+|.-|++.|+|-.|...|+
T Consensus 631 ~li~~lg----L~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~Ei 702 (816)
T 3s28_A 631 DLIEEYK----LNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEI 702 (816)
T ss_dssp HHHHHTT----CBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHH
T ss_pred HHHHHcC----CCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHH
Confidence 4443222 333 788886 22 13355666668999999876 59999999999999999999999999888
Q ss_pred cccccccceEeccc
Q 003055 718 RQEVGEENFFLFGA 731 (852)
Q Consensus 718 ~e~vg~eN~f~FG~ 731 (852)
.+.. +|+++|..
T Consensus 703 V~dg--~~Gllv~p 714 (816)
T 3s28_A 703 IVHG--KSGFHIDP 714 (816)
T ss_dssp CCBT--TTBEEECT
T ss_pred HccC--CcEEEeCC
Confidence 7553 78888865
No 12
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.81 E-value=0.0073 Score=62.08 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=92.6
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003055 571 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 650 (852)
Q Consensus 571 ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 650 (852)
++++....+++-|+..+|+..+ ++..+.++.+- . ....+++.|.. |. ...+-+++..+
T Consensus 194 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~---~--------~~~~l~i~G~g-~~---~~~l~~~~~~~------ 251 (394)
T 3okp_A 194 FTDTTPVIACNSRLVPRKGQDS-LIKAMPQVIAA---R--------PDAQLLIVGSG-RY---ESTLRRLATDV------ 251 (394)
T ss_dssp CCTTCCEEEEESCSCGGGCHHH-HHHHHHHHHHH---S--------TTCEEEEECCC-TT---HHHHHHHTGGG------
T ss_pred CCcCceEEEEEeccccccCHHH-HHHHHHHHHhh---C--------CCeEEEEEcCc-hH---HHHHHHHHhcc------
Confidence 5677788999999999999887 77665554321 1 13578888863 21 12333333211
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCc-----cccCCCccchhhcccceEeeecccccccccccccccc
Q 003055 651 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG-----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 725 (852)
Q Consensus 651 Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag-----~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN 725 (852)
.+ +|.|+....-+-...++..||+....|+.+ .|..|++-+-+|.-|++.|+|--|..-|+.+. .+
T Consensus 252 ----~~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~---~~ 322 (394)
T 3okp_A 252 ----SQ--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP---AT 322 (394)
T ss_dssp ----GG--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT---TT
T ss_pred ----cC--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc---CC
Confidence 12 689998865566667889999999988873 49999999999999999999988888877643 27
Q ss_pred eEeccc
Q 003055 726 FFLFGA 731 (852)
Q Consensus 726 ~f~FG~ 731 (852)
++++..
T Consensus 323 g~~~~~ 328 (394)
T 3okp_A 323 GLVVEG 328 (394)
T ss_dssp EEECCT
T ss_pred ceEeCC
Confidence 777753
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.77 E-value=0.0065 Score=63.66 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=86.4
Q ss_pred CcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCC--cHHHHHHHHHHHHHhhhhcCC
Q 003055 574 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFAT--YVQAKRIVKFITDVGATVNHD 651 (852)
Q Consensus 574 dslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~--y~~aK~iIk~I~~va~~vn~D 651 (852)
+....+++=|+..+|+..+ ++..+.++.+- .+ ...+++.|...+. +..-+.+-+++.+.+
T Consensus 183 ~~~~il~vGr~~~~Kg~~~-li~a~~~l~~~---~~--------~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~------ 244 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDI-YVLAAARFISK---YP--------DAKVRFLCNSHHESKFDLHSIALRELVASG------ 244 (413)
T ss_dssp TSEEEECCSCSSGGGTHHH-HHHHHHHHHHH---CT--------TCCEEEEEECCTTCSCCHHHHHHHHHHHHT------
T ss_pred CceEEEEcCCCchhcCcHH-HHHHHHHHHHh---CC--------CcEEEEEeCCcccchhhHHHHHHHHHHHcC------
Confidence 7889999999999999988 77766654322 11 3457777765543 323355555554443
Q ss_pred cCCCCc----ceEEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 003055 652 PEIGDL----LKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 720 (852)
Q Consensus 652 p~v~~~----lKVvFlenY-~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~ 720 (852)
+.++ -+||++..| +-+-...++.+||+....|. .|..|.+-+-+|.-|++.|+|--|..-|+.++
T Consensus 245 --l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 314 (413)
T 3oy2_A 245 --VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314 (413)
T ss_dssp --CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT
T ss_pred --cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc
Confidence 2221 025555554 44445567899999999776 69999999999999999999988888776653
No 14
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.58 E-value=0.0071 Score=63.73 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=93.4
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003055 571 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 650 (852)
Q Consensus 571 ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 650 (852)
++++....+++-|+..+|...+ ++..+.++ ++..|. ....+++.|...+.....+.+.+++.+.+
T Consensus 239 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l---~~~~p~------~~~~l~i~G~~~~~g~~~~~l~~~~~~~~----- 303 (438)
T 3c48_A 239 IPLHTKVVAFVGRLQPFKGPQV-LIKAVAAL---FDRDPD------RNLRVIICGGPSGPNATPDTYRHMAEELG----- 303 (438)
T ss_dssp CCSSSEEEEEESCBSGGGCHHH-HHHHHHHH---HHHCTT------CSEEEEEECCBC------CHHHHHHHHTT-----
T ss_pred CCCCCcEEEEEeeecccCCHHH-HHHHHHHH---HhhCCC------cceEEEEEeCCCCCCcHHHHHHHHHHHcC-----
Confidence 4567788999999999998877 66655543 321111 13678888874322223344555554432
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 003055 651 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 730 (852)
Q Consensus 651 Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~FG 730 (852)
+.+ +|.|+....-+-...++.+||+....|. .|..|++-+-+|.-|++.|+|--|...|+.+.. ++++++.
T Consensus 304 ---l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 374 (438)
T 3c48_A 304 ---VEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEG--ETGLLVD 374 (438)
T ss_dssp ---CTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBT--TTEEEES
T ss_pred ---CCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCC--CcEEECC
Confidence 222 6889887655556678899999988775 589999999999999999999888888776543 6777775
Q ss_pred c
Q 003055 731 A 731 (852)
Q Consensus 731 ~ 731 (852)
.
T Consensus 375 ~ 375 (438)
T 3c48_A 375 G 375 (438)
T ss_dssp S
T ss_pred C
Confidence 3
No 15
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.54 E-value=0.0048 Score=58.25 Aligned_cols=135 Identities=15% Similarity=0.083 Sum_probs=95.6
Q ss_pred CCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhh
Q 003055 568 GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGAT 647 (852)
Q Consensus 568 g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~ 647 (852)
+..++++..+.+++-|+..+|+..+ ++..+.++ . ...+++.|..... ..+.+++.+...-
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l---~------------~~~l~i~G~~~~~----~~l~~~~~~~~~~ 75 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKKL---Q------------DEKLYIVGWFSKG----DHAERYARKIMKI 75 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHHC---T------------TSCEEEEBCCCTT----STHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHhC---C------------CcEEEEEecCccH----HHHHHHHHhhhcc
Confidence 4678888899999999999999877 55443332 1 2357777764332 2344444422111
Q ss_pred hcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceE
Q 003055 648 VNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 727 (852)
Q Consensus 648 vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f 727 (852)
+.+ +|.|+...+-+-...++..||+....|+ .|..|++-+-+|.-|++.|+|-.|...|+.+.. .+++
T Consensus 76 ------l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~ 143 (177)
T 2f9f_A 76 ------APD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINE--KTGY 143 (177)
T ss_dssp ------SCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBT--TTEE
T ss_pred ------cCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCC--CccE
Confidence 222 5888887776667788999999998776 789999999999999999999888888877553 6788
Q ss_pred ecccchh
Q 003055 728 LFGARAH 734 (852)
Q Consensus 728 ~FG~~~~ 734 (852)
++..+.+
T Consensus 144 ~~~~d~~ 150 (177)
T 2f9f_A 144 LVNADVN 150 (177)
T ss_dssp EECSCHH
T ss_pred EeCCCHH
Confidence 8833333
No 16
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.43 E-value=0.0064 Score=63.44 Aligned_cols=128 Identities=20% Similarity=0.237 Sum_probs=86.6
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003055 571 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 650 (852)
Q Consensus 571 ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 650 (852)
++++....+++-|+..+|...+ ++..+. ++++ . .|..+++.|.. |. ...+.+++.+.+
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~---~l~~-~--------~~~~l~i~G~g-~~---~~~l~~~~~~~~----- 264 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQD-VVQAFA---KIVT-E--------VDAKLLLVGDG-PE---FCTILQLVKNLH----- 264 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHH-HHHHHH---HHHH-S--------SCCEEEEECCC-TT---HHHHHHHHHTTT-----
T ss_pred CCCCCeEEEEeeccccccCHHH-HHHHHH---HHHh-h--------CCCEEEEECCc-hH---HHHHHHHHHHcC-----
Confidence 4456678889999999998877 655443 3443 1 25678888853 22 234444443332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 003055 651 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 730 (852)
Q Consensus 651 Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~FG 730 (852)
+.+ +|.|+. + .+-...++.+||+....|. .|+.|++-+-+|..|++.|+|--|...|+.++. ++++++.
T Consensus 265 ---l~~--~v~~~g-~-~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~--~~g~~~~ 333 (394)
T 2jjm_A 265 ---IED--RVLFLG-K-QDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG--DTGYLCE 333 (394)
T ss_dssp ---CGG--GBCCCB-S-CSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT--TTEEEEC
T ss_pred ---CCC--eEEEeC-c-hhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC--CceEEeC
Confidence 122 577776 3 3334567789999998776 699999999999999999999888888877543 6778775
Q ss_pred c
Q 003055 731 A 731 (852)
Q Consensus 731 ~ 731 (852)
.
T Consensus 334 ~ 334 (394)
T 2jjm_A 334 V 334 (394)
T ss_dssp T
T ss_pred C
Confidence 3
No 17
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.38 E-value=0.012 Score=63.74 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=94.9
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccC-CC--CcH-----H---HHHHHH
Q 003055 571 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FA--TYV-----Q---AKRIVK 639 (852)
Q Consensus 571 ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA-~P--~y~-----~---aK~iIk 639 (852)
++++..+.+++=|+...|...+ ++..+.++.+-. +. ...++++|.. .| .|. . -+.+.+
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~~---~~-------~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~ 326 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYG-LVEAYVQNKELQ---DK-------ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIE 326 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHHH---HH-------CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHH
T ss_pred cCCCCcEEEEeecCccccCHHH-HHHHHHHHHHhC---CC-------ceEEEEECCCCCcccccccccccchHHHHHHHH
Confidence 4567778999999999999887 666555442210 11 3467777762 22 121 1 445555
Q ss_pred HHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeecccccc
Q 003055 640 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 715 (852)
Q Consensus 640 ~I~~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~----Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanv 715 (852)
++.+.+ +.+ +|.|+....-+-...++.+| |+-...|. .|..|.+-+-+|.-|++.|+|--|...
T Consensus 327 ~~~~~~--------l~~--~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~ 394 (499)
T 2r60_A 327 LIDNND--------CRG--KVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPA 394 (499)
T ss_dssp HHHHTT--------CBT--TEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHH
T ss_pred HHHhcC--------CCc--eEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHH
Confidence 554433 223 68998876556666788999 99998776 499999999999999999999888888
Q ss_pred cccccccccceEeccc
Q 003055 716 EIRQEVGEENFFLFGA 731 (852)
Q Consensus 716 Ei~e~vg~eN~f~FG~ 731 (852)
|+.+.. +|++++..
T Consensus 395 e~v~~~--~~g~l~~~ 408 (499)
T 2r60_A 395 EILDGG--KYGVLVDP 408 (499)
T ss_dssp HHTGGG--TSSEEECT
T ss_pred HHhcCC--ceEEEeCC
Confidence 877543 67888853
No 18
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.21 E-value=0.016 Score=54.58 Aligned_cols=135 Identities=17% Similarity=0.075 Sum_probs=91.4
Q ss_pred HHHcCCcCCCCccccccccccc-ccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHH
Q 003055 564 KEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 642 (852)
Q Consensus 564 ~~~~g~~ldpdslfdvq~kR~h-eYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 642 (852)
+++.|. +++. +.+++-|+. .+|...+ ++..+.+ ++. +.. ..+.++++.|...|.+ .+.+.+++.
T Consensus 28 r~~~~~--~~~~-~i~~~G~~~~~~K~~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~~~~~~--~~~l~~~~~ 92 (200)
T 2bfw_A 28 LSKFGM--DEGV-TFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPEL--EGWARSLEE 92 (200)
T ss_dssp HHHTTC--CSCE-EEEEESCBCSSSSCHHH-HHHHHHH---HTT-SGG-----GGGEEEEEECCBCHHH--HHHHHHHHH
T ss_pred HHHcCC--CCCC-EEEEeeccccccCCHHH-HHHHHHH---HHh-hcc-----CCCeEEEEECCCChHH--HHHHHHHHH
Confidence 344554 3333 778899999 8998877 6655444 420 000 1256788888754322 233444433
Q ss_pred HHhhhhcCCcCCCCcceEEE-ecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc
Q 003055 643 DVGATVNHDPEIGDLLKVIF-VPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 721 (852)
Q Consensus 643 ~va~~vn~Dp~v~~~lKVvF-lenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~v 721 (852)
... +|.| +...+-+-...++..||+....|+. |..|++-+-+|..|++.|+|--|...|+.
T Consensus 93 ~~~-------------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~--e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~--- 154 (200)
T 2bfw_A 93 KHG-------------NVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDII--- 154 (200)
T ss_dssp HCT-------------TEEEECSCCCHHHHHHHHTTCSEEEECCSC--CSSCHHHHHHHHTTCEEEEESCHHHHHHC---
T ss_pred hcC-------------CEEEEeccCCHHHHHHHHHHCCEEEECCCC--CCccHHHHHHHHCCCCEEEeCCCChHHHc---
Confidence 221 5888 7766555667888999999997764 99999999999999999999888877766
Q ss_pred cccceEeccc
Q 003055 722 GEENFFLFGA 731 (852)
Q Consensus 722 g~eN~f~FG~ 731 (852)
..++++++..
T Consensus 155 ~~~~g~~~~~ 164 (200)
T 2bfw_A 155 TNETGILVKA 164 (200)
T ss_dssp CTTTCEEECT
T ss_pred CCCceEEecC
Confidence 3467787753
No 19
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=95.44 E-value=0.037 Score=57.20 Aligned_cols=125 Identities=11% Similarity=0.073 Sum_probs=85.4
Q ss_pred Ccccccccccc-cccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003055 574 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 652 (852)
Q Consensus 574 dslfdvq~kR~-heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 652 (852)
+....+++-|+ ..+|+..+ ++..+. ++++ . .....+++.|... . +.+.+++.++
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~---~l~~-~-------~~~~~l~i~G~~~---~--~~l~~~~~~~-------- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALP---KLVA-R-------FPDVEILIVGRGD---E--DELREQAGDL-------- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHH---HHHT-T-------STTCEEEEESCSC---H--HHHHHHTGGG--------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHH---HHHH-H-------CCCeEEEEEcCCc---H--HHHHHHHHhc--------
Confidence 45678889999 99998877 665444 3443 1 1245788888642 2 4444444322
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 003055 653 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 730 (852)
Q Consensus 653 ~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~FG 730 (852)
.+ +|.|+...+=.-...++..||+-...|. ..|..|++-+-+|..|++.|+|--|..-|+.+.. +++++|.
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 332 (406)
T 2gek_A 262 --AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADG--DAGRLVP 332 (406)
T ss_dssp --GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTT--TSSEECC
T ss_pred --cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCC--CceEEeC
Confidence 11 5888876544444677889999998653 3688999999999999999999777777766432 5666663
No 20
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.00 E-value=0.029 Score=57.30 Aligned_cols=128 Identities=14% Similarity=0.109 Sum_probs=90.5
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003055 571 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 650 (852)
Q Consensus 571 ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 650 (852)
++++....+++-|++.+|+..+ ++..+.+ +++ ... .+..+++.|.... +.+.+++.+.+
T Consensus 192 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~---l~~---~~~----~~~~l~i~G~g~~-----~~~~~~~~~~~----- 250 (374)
T 2iw1_A 192 IKEQQNLLLQVGSDFGRKGVDR-SIEALAS---LPE---SLR----HNTLLFVVGQDKP-----RKFEALAEKLG----- 250 (374)
T ss_dssp CCTTCEEEEEECSCTTTTTHHH-HHHHHHT---SCH---HHH----HTEEEEEESSSCC-----HHHHHHHHHHT-----
T ss_pred CCCCCeEEEEeccchhhcCHHH-HHHHHHH---hHh---ccC----CceEEEEEcCCCH-----HHHHHHHHHcC-----
Confidence 5567778889999999999887 6554433 221 100 1467888887421 34555555443
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 003055 651 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 730 (852)
Q Consensus 651 Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~FG 730 (852)
+.+ +|.|+.. .+-...++..||+-...|. .|+.|++-+-+|.-|++.|+|--|...|+.++. ++++++.
T Consensus 251 ---~~~--~v~~~g~--~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~ 319 (374)
T 2iw1_A 251 ---VRS--NVHFFSG--RNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA--NCGTVIA 319 (374)
T ss_dssp ---CGG--GEEEESC--CSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH--TCEEEEC
T ss_pred ---CCC--cEEECCC--cccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccC--CceEEeC
Confidence 112 6888874 3445667899999998776 599999999999999999999888888876553 6788875
No 21
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=94.97 E-value=0.088 Score=48.13 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=77.0
Q ss_pred ccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003055 576 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 655 (852)
Q Consensus 576 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~v~ 655 (852)
+..+++-|+..+|...+ ++..+.+ +++ . .+..+++.|.. |. ...+.+++.+.+-
T Consensus 3 ~~i~~~G~~~~~Kg~~~-li~a~~~---l~~-~--------~~~~l~i~G~g-~~---~~~~~~~~~~~~~--------- 56 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSV-LIKAVAL---SKY-K--------QDIVLLLKGKG-PD---EKKIKLLAQKLGV--------- 56 (166)
T ss_dssp EEEEEESCCSTTTTHHH-HHHHHHT---CTT-G--------GGEEEEEECCS-TT---HHHHHHHHHHHTC---------
T ss_pred eEEEEEeccchhcCHHH-HHHHHHH---hcc-C--------CCeEEEEEeCC-cc---HHHHHHHHHHcCC---------
Confidence 45678889999999887 6665544 332 1 24678888863 22 2445555544431
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccc-eEeeecc-cccccccc
Q 003055 656 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC-ILIGTLD-GANVEIRQ 719 (852)
Q Consensus 656 ~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~-l~lgtlD-GanvEi~e 719 (852)
+|.| ...+-+-...++..||+....|+ .|..|.+-+-+|..|+ +.|+|-+ |..-|+.+
T Consensus 57 ---~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~ 116 (166)
T 3qhp_A 57 ---KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFAL 116 (166)
T ss_dssp ---EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCS
T ss_pred ---eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhcc
Confidence 4666 44445556778899999998776 6999999999999997 9999654 45555543
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=93.43 E-value=0.12 Score=52.86 Aligned_cols=129 Identities=19% Similarity=0.120 Sum_probs=87.9
Q ss_pred CcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 003055 574 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 653 (852)
Q Consensus 574 dslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~ 653 (852)
+..+.+++-|+..+|...+ ++..+.+ + +..+++.|.. |... .+-+++..++
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~---~-------------~~~l~i~G~g-~~~~---~l~~~~~~~~-------- 211 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHA---C-------------GRRLVLAGPA-WEPE---YFDEITRRYG-------- 211 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHH---H-------------TCCEEEESCC-CCHH---HHHHHHHHHT--------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHh---c-------------CcEEEEEeCc-ccHH---HHHHHHHHhC--------
Confidence 3457888999999999887 6654433 2 2357777765 3222 2223333322
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCC--------ccccCCCccchhhcccceEeeecccccccccccccccc
Q 003055 654 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTA--------GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 725 (852)
Q Consensus 654 v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~a--------g~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN 725 (852)
+ +|.|+..-+=.-...++.+||+....|+. -.|..|++-+-+|.-|++.|+|--|..-|+.+..|.++
T Consensus 212 --~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~ 287 (342)
T 2iuy_A 212 --S--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVV 287 (342)
T ss_dssp --T--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEEC
T ss_pred --C--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCc
Confidence 1 58887765444446778999999887761 16999999999999999999998888888876633467
Q ss_pred eEecccchhh
Q 003055 726 FFLFGARAHE 735 (852)
Q Consensus 726 ~f~FG~~~~e 735 (852)
+++|..+.++
T Consensus 288 g~~~~~d~~~ 297 (342)
T 2iuy_A 288 GYGTDFAPDE 297 (342)
T ss_dssp CSSSCCCHHH
T ss_pred eEEcCCCHHH
Confidence 7777653333
No 23
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=89.25 E-value=3.1 Score=45.69 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=68.4
Q ss_pred cccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC-
Q 003055 577 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG- 655 (852)
Q Consensus 577 fdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~v~- 655 (852)
+.+++-|+.. |.... ++..+.+ |++..| ...+++.|..-| .-..+.+++.+.+ +.
T Consensus 378 ~v~~~g~~~~-K~~~~-li~a~~~---l~~~~~--------~~~l~i~G~~g~---~~~~l~~~~~~~~--------l~~ 433 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQ-SMARMLA---VLREVP--------DSVLWLLSGPGE---ADARLRAFAHAQG--------VDA 433 (568)
T ss_dssp CEEEECCCGG-GCCHH-HHHHHHH---HHHHCT--------TCEEEEECCSTT---HHHHHHHHHHHTT--------CCG
T ss_pred EEEEeCCccc-cCCHH-HHHHHHH---HHHhCC--------CcEEEEecCCHH---HHHHHHHHHHHcC--------CCh
Confidence 3447888888 98777 6665544 432011 346777775222 2344455554432 22
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeee
Q 003055 656 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGT 709 (852)
Q Consensus 656 ~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgt 709 (852)
+ +|+|+.--+-+-...++.+|||....|.. ..|++-+-+|.-|++.|+.
T Consensus 434 ~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G~Pvv~~ 482 (568)
T 2vsy_A 434 Q--RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTGCPVLTT 482 (568)
T ss_dssp G--GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEBC
T ss_pred h--HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCCCCEEec
Confidence 2 69998865433445678999999988765 7899999999999999994
No 24
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=86.73 E-value=9.5 Score=42.69 Aligned_cols=142 Identities=6% Similarity=-0.001 Sum_probs=84.9
Q ss_pred CcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCc-HHHHHHHHHHHHHhhhhcCCc
Q 003055 574 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIVKFITDVGATVNHDP 652 (852)
Q Consensus 574 dslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y-~~aK~iIk~I~~va~~vn~Dp 652 (852)
+..++++|=|+...|.... +|.-+.++.+ + .|..+ ..+++|..|....++ ..-..+-+.+.+++..+|..-
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~----~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~ 325 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH----GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKY 325 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHH--H-CGGGT----TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHHH--h-Ccccc----CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhc
Confidence 3457889999999998877 7777666532 2 33322 245677666533222 122234444544444444211
Q ss_pred CCCCcceEEEec-CCChhhhhhhccccccccccCCCccccCCCccchhhccc------ceEeeecccccccccccccccc
Q 003055 653 EIGDLLKVIFVP-DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNG------CILIGTLDGANVEIRQEVGEEN 725 (852)
Q Consensus 653 ~v~~~lKVvFle-nY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG------~l~lgtlDGanvEi~e~vg~eN 725 (852)
...+.-.|+|+. ...-+--..+..+|||-...|. .|.-|..-+-+|.-| .+.+|...|..-|+ ++
T Consensus 326 g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l------~~ 397 (482)
T 1uqt_A 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL------TS 397 (482)
T ss_dssp CBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC------TT
T ss_pred ccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh------CC
Confidence 111222488764 3344445578899999999887 477777777777655 57777777876655 25
Q ss_pred eEeccc
Q 003055 726 FFLFGA 731 (852)
Q Consensus 726 ~f~FG~ 731 (852)
++++..
T Consensus 398 g~lv~p 403 (482)
T 1uqt_A 398 ALIVNP 403 (482)
T ss_dssp SEEECT
T ss_pred eEEECC
Confidence 666643
No 25
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=83.63 E-value=2.8 Score=42.89 Aligned_cols=124 Identities=11% Similarity=0.063 Sum_probs=69.4
Q ss_pred CCccccccccccccc-ccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003055 573 PDAMFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 651 (852)
Q Consensus 573 pdslfdvq~kR~heY-KRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 651 (852)
++..+.+.+-|+.+. |.... ++..+ .++++-. ...++|+++ +|... +.+.+.+... .
T Consensus 204 ~~~~vl~~~gr~~~~~K~~~~-li~a~---~~l~~~~--------~~~~~i~~~--g~~~~----~~~~~~~~~~---~- 261 (375)
T 3beo_A 204 NNRLVLMTAHRRENLGEPMRN-MFRAI---KRLVDKH--------EDVQVVYPV--HMNPV----VRETANDILG---D- 261 (375)
T ss_dssp TSEEEEEECCCGGGTTHHHHH-HHHHH---HHHHHHC--------TTEEEEEEC--CSCHH----HHHHHHHHHT---T-
T ss_pred CCCeEEEEecccccchhHHHH-HHHHH---HHHHhhC--------CCeEEEEeC--CCCHH----HHHHHHHHhh---c-
Confidence 344556678888765 76544 44443 3343201 124566653 45321 2222322211 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceEecc
Q 003055 652 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFG 730 (852)
Q Consensus 652 p~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlD-GanvEi~e~vg~eN~f~FG 730 (852)
.+ +|.|+....-.-...++.+||+-..-| |+.-+-+|.-|.+.|+|-+ |...|+.+. .+++++.
T Consensus 262 ---~~--~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~---g~g~~v~ 326 (375)
T 3beo_A 262 ---YG--RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEA---GTLKLAG 326 (375)
T ss_dssp ---CT--TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHT---TSEEECC
T ss_pred ---cC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecC---CceEEcC
Confidence 12 588865443334456778999987543 4456789999999999966 666665432 2677764
Q ss_pred cch
Q 003055 731 ARA 733 (852)
Q Consensus 731 ~~~ 733 (852)
.+.
T Consensus 327 ~d~ 329 (375)
T 3beo_A 327 TDE 329 (375)
T ss_dssp SCH
T ss_pred CCH
Confidence 443
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=83.52 E-value=8 Score=39.71 Aligned_cols=64 Identities=17% Similarity=0.049 Sum_probs=43.2
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceEecccc
Q 003055 659 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFGAR 732 (852)
Q Consensus 659 KVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlD-GanvEi~e~vg~eN~f~FG~~ 732 (852)
+|.|+..-.-.-...++.+||+-..-| |+.-+-+|.-|.+.|+|-. |...|+.+. .+++++..+
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~---g~g~lv~~d 328 (384)
T 1vgv_A 264 NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA---GTVRLVGTD 328 (384)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH---TSEEEECSS
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC---CceEEeCCC
Confidence 588864322234456779999977544 5557799999999999976 666665432 267777543
No 27
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=53.72 E-value=35 Score=34.66 Aligned_cols=98 Identities=7% Similarity=-0.074 Sum_probs=59.8
Q ss_pred ccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeE-EEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 003055 576 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRV-CIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 654 (852)
Q Consensus 576 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~-~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~v 654 (852)
.+.+.+.|+...|...+ ++..+.+ +++ +.. ++++|... . +.+.+++.+.+ +
T Consensus 185 ~il~~~g~~~~~k~~~~-li~a~~~---l~~-----------~~~~l~i~G~~~---~--~~l~~~~~~~~--------~ 236 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQT-MPQVAAK---LGD-----------SVTIWHQSGKGS---Q--QSVEQAYAEAG--------Q 236 (364)
T ss_dssp EEEEECTTTCCHHHHHH-HHHHHHH---HGG-----------GEEEEEECCTTC---H--HHHHHHHHHTT--------C
T ss_pred EEEEEcCchHhHHHHHH-HHHHHHH---hcC-----------CcEEEEEcCCch---H--HHHHHHHhhcC--------C
Confidence 34556788888887665 4444333 321 223 56777654 1 34444443322 1
Q ss_pred CCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 003055 655 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 712 (852)
Q Consensus 655 ~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDG 712 (852)
+ +|.|+..- +-...++++||+-...| | |++-+-+|.-|++.|+|--|
T Consensus 237 -~--~v~~~g~~--~~~~~~~~~ad~~v~~s--g----~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 237 -P--QHKVTEFI--DDMAAAYAWADVVVCRS--G----ALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp -T--TSEEESCC--SCHHHHHHHCSEEEECC--C----HHHHHHHHHHTCCEEECCCC
T ss_pred -C--ceEEecch--hhHHHHHHhCCEEEECC--c----hHHHHHHHHhCCCEEEeeCC
Confidence 1 47777643 34456778999988765 2 56667899999999999444
No 28
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=52.53 E-value=32 Score=37.13 Aligned_cols=122 Identities=10% Similarity=0.032 Sum_probs=76.5
Q ss_pred cccccccccc-cccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 003055 575 AMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 653 (852)
Q Consensus 575 slfdvq~kR~-heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~ 653 (852)
..+.+++=|+ .+.|...+ ++..+.++ ++..|.. .+..++++|...... .+ .
T Consensus 241 ~~~il~~gr~~~~~Kg~~~-li~A~~~l---~~~~~~~-----~~~~l~ivG~~~~~~---------------~l----~ 292 (413)
T 2x0d_A 241 EKIILVYGRPSVKRNAFTL-IVEALKIF---VQKYDRS-----NEWKIISVGEKHKDI---------------AL----G 292 (413)
T ss_dssp CSEEEEEECTTCGGGCHHH-HHHHHHHH---HHHCTTG-----GGCEEEEEESCCCCE---------------EE----E
T ss_pred CCEEEEEecCchhccCHHH-HHHHHHHH---HHhCCCC-----CceEEEEEcCCchhh---------------hc----C
Confidence 3345566675 56676655 55555443 3201110 024677777643320 01 1
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeccc
Q 003055 654 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 731 (852)
Q Consensus 654 v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanvEi~e~vg~eN~f~FG~ 731 (852)
+. -+|.|+..-.-+-...++.+||+....|. .|.-|..-+-+|.-|++.|++- |...|+.+. .+|++++-.
T Consensus 293 ~~--~~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~--~~~G~lv~~ 363 (413)
T 2x0d_A 293 KG--IHLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNK-YENKDLSNW--HSNIVSLEQ 363 (413)
T ss_dssp TT--EEEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGT--BTTEEEESS
T ss_pred Cc--CcEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeC-CCcchhhhc--CCCEEEeCC
Confidence 12 27889876555555677899999998876 3666888899999999999974 445677654 378888853
No 29
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=44.46 E-value=64 Score=36.67 Aligned_cols=137 Identities=12% Similarity=0.039 Sum_probs=81.0
Q ss_pred cccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCc-HHHHHHHHHHHHHhhhhcCCcC
Q 003055 575 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIVKFITDVGATVNHDPE 653 (852)
Q Consensus 575 slfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y-~~aK~iIk~I~~va~~vn~Dp~ 653 (852)
.-++.+|-|+...|-... +|.-+ ++ +++ .|.. ..+++|..|....++ ..-+.+-+.|.+++..||..-
T Consensus 281 ~~lIl~VgRLd~~KGi~~-lL~Af-~l--l~~-~P~~-----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~- 349 (496)
T 3t5t_A 281 HRLVVHSGRTDPIKNAER-AVRAF-VL--AAR-GGGL-----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL- 349 (496)
T ss_dssp SEEEEEEEESSGGGCHHH-HHHHH-HH--HHH-TSSC-----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ceEEEEcccCccccCHHH-HHHHH-HH--HHh-Cccc-----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc-
Confidence 457788999998887766 66655 44 222 3321 134566555444333 223345555555555555210
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc----ccceEeeecccccccccccccccceEec
Q 003055 654 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM----NGCILIGTLDGANVEIRQEVGEENFFLF 729 (852)
Q Consensus 654 v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfam----NG~l~lgtlDGanvEi~e~vg~eN~f~F 729 (852)
+ ..+|+|+..-+.+---.+..+|||-..+|++ |-=|.--+-+|. .|.+.+|..-|+--|+. ++++++
T Consensus 350 -g-~~~V~f~g~v~~~el~aly~~ADv~vv~Slr--EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-----~~allV 420 (496)
T 3t5t_A 350 -G-SDTVRIDNDNDVNHTIACFRRADLLIFNSTV--DGQNLSTFEAPLVNERDADVILSETCGAAEVLG-----EYCRSV 420 (496)
T ss_dssp -C-TTSEEEEECCCHHHHHHHHHHCSEEEECCSS--BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-----GGSEEE
T ss_pred -C-CcCEEEeCCCCHHHHHHHHHhccEEEECccc--ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-----CCEEEE
Confidence 0 1168888644444445788999999988875 444444444443 47899999888876652 355666
Q ss_pred cc
Q 003055 730 GA 731 (852)
Q Consensus 730 G~ 731 (852)
-.
T Consensus 421 nP 422 (496)
T 3t5t_A 421 NP 422 (496)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 30
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=35.59 E-value=1e+02 Score=32.75 Aligned_cols=106 Identities=12% Similarity=0.063 Sum_probs=71.2
Q ss_pred ccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003055 576 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 655 (852)
Q Consensus 576 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~v~ 655 (852)
...+++=|+..+|.. +..+++.. ....+++.|.. | + ....+.
T Consensus 223 ~~i~~vGrl~~~Kg~----------~~~l~~~~--------~~~~l~ivG~g-~---------------~----~~~~l~ 264 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF----------FVVASKAF--------PQVTFHVIGSG-M---------------G----RHPGYG 264 (406)
T ss_dssp EEEEEECCTTBCHHH----------HHHHHHHC--------TTEEEEEESCS-S---------------C----CCTTCC
T ss_pred cEEEEEeccccccCH----------HHHHHHhC--------CCeEEEEEeCc-h---------------H----HhcCCC
Confidence 577889999999987 22232211 13578888853 2 1 122233
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhh-------cccceEeeecccccccccccccccceEe
Q 003055 656 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFA-------MNGCILIGTLDGANVEIRQEVGEENFFL 728 (852)
Q Consensus 656 ~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfa-------mNG~l~lgtlDGanvEi~e~vg~eN~f~ 728 (852)
+ +|.|+.--.-+-...++.+||+...-|+ .|..|..-+-+| .-|.+.|+| |. | . +.+|+++
T Consensus 265 ~--~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas-~~--v--~---~~~~G~l 332 (406)
T 2hy7_A 265 D--NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCP-NA--V--V---GPYKSRF 332 (406)
T ss_dssp T--TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEE-GG--G--T---CSCSSEE
T ss_pred C--CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEe-hh--c--c---cCcceEE
Confidence 4 6899876554445567899999998776 588888888899 999999999 43 2 2 2357777
Q ss_pred -ccc
Q 003055 729 -FGA 731 (852)
Q Consensus 729 -FG~ 731 (852)
+-.
T Consensus 333 ~v~~ 336 (406)
T 2hy7_A 333 GYTP 336 (406)
T ss_dssp EECT
T ss_pred EeCC
Confidence 643
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=29.51 E-value=3.2e+02 Score=27.74 Aligned_cols=52 Identities=17% Similarity=0.049 Sum_probs=32.9
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccc
Q 003055 659 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEI 717 (852)
Q Consensus 659 KVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlD-GanvEi 717 (852)
+|.|+....-.-...++++||+-..-| |+--+-+|.-|.+.|.|-+ |...|+
T Consensus 256 ~v~~~g~~g~~~~~~~~~~ad~~v~~S-------~g~~lEA~a~G~PvI~~~~~~~~~~~ 308 (376)
T 1v4v_A 256 NFVLLDPLEYGSMAALMRASLLLVTDS-------GGLQEEGAALGVPVVVLRNVTERPEG 308 (376)
T ss_dssp TEEEECCCCHHHHHHHHHTEEEEEESC-------HHHHHHHHHTTCCEEECSSSCSCHHH
T ss_pred CEEEECCCCHHHHHHHHHhCcEEEECC-------cCHHHHHHHcCCCEEeccCCCcchhh
Confidence 588886332222345679999986433 3334478999999998744 444443
No 32
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=22.08 E-value=94 Score=28.23 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=31.1
Q ss_pred CCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHhccc
Q 003055 244 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 284 (852)
Q Consensus 244 ~~~~ihlNDtH---palai~ELmR~Lid~~gl~w~eAw~i~~~~ 284 (852)
.++.||..-|. +++++.-||+. .|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~~----~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMNS----EQTSFTSAFSLVKNA 121 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHHH----HCCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHHH----cCCCHHHHHHHHHHH
Confidence 57899999998 78888888873 599999999987765
No 33
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A
Probab=20.51 E-value=3e+02 Score=28.53 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=40.8
Q ss_pred CeEEEEeccCCCCcHHH-HHHHHHHHHHhhhhcCCcCCCC---cceEEEecCCChhhhhhh------------------c
Q 003055 618 PRVCIFGGKAFATYVQA-KRIVKFITDVGATVNHDPEIGD---LLKVIFVPDYNVSVAELL------------------I 675 (852)
Q Consensus 618 P~~~IFaGKA~P~y~~a-K~iIk~I~~va~~vn~Dp~v~~---~lKVvFlenY~vslAe~l------------------i 675 (852)
|.++|.|| -|+.-..+ ..++.+|..+..-...||.+.. ...+++||-.|..=.+.- .
T Consensus 58 p~v~i~ag-iHg~E~~g~~~~~~l~~~L~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~ 136 (309)
T 3d4u_A 58 NAMWIDCG-IHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEKNAC 136 (309)
T ss_dssp CEEEEECC-SSTTCTHHHHHHHHHHHHHHHSTTC-----CCSTTCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCTTCSS
T ss_pred ceEEEEec-cCCcchhhHHHHHHHHHHHHHhhccCHHHHHHHhcCeEEEEeeeccchhheeecccceeecCCCCCCCCCC
Confidence 66666665 56665555 4456677777765556786554 457899999987654432 4
Q ss_pred cccccccccCC
Q 003055 676 PASELSQHIST 686 (852)
Q Consensus 676 pa~Dvs~nis~ 686 (852)
.|+|+--|-|.
T Consensus 137 ~GvDLNRnf~~ 147 (309)
T 3d4u_A 137 VGTDLNRNFAS 147 (309)
T ss_dssp CCCCGGGCSCC
T ss_pred cCccccCCCCh
Confidence 46676666665
Done!