Query 003056
Match_columns 852
No_of_seqs 404 out of 3002
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:42:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 6E-110 2E-114 990.8 68.9 646 1-726 2-652 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 6.3E-97 2E-101 873.5 67.5 589 1-700 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 8.1E-96 3E-100 864.0 58.8 588 2-700 3-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.7E-89 5.9E-94 802.6 48.1 541 2-641 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 3.1E-79 1.1E-83 710.5 51.8 498 2-631 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 6.4E-64 2.2E-68 567.8 43.1 380 1-382 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.6E-62 5.6E-67 554.5 42.0 374 3-381 20-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.5E-62 5.1E-67 557.3 36.4 378 1-383 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.7E-60 5.7E-65 535.9 39.0 372 2-381 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 3.9E-40 1.3E-44 364.5 22.3 309 2-381 4-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 8.1E-32 2.8E-36 274.3 25.0 210 390-700 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 2.9E-30 9.9E-35 265.6 26.0 209 392-701 1-214 (227)
13 2fsj_A Hypothetical protein TA 99.9 1.1E-27 3.7E-32 263.9 14.7 227 112-378 95-343 (346)
14 2ych_A Competence protein PILM 99.9 4.9E-27 1.7E-31 262.8 15.4 317 3-378 15-373 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 4.6E-25 1.6E-29 235.3 21.5 202 116-377 71-272 (272)
16 3n8e_A Stress-70 protein, mito 99.9 4.5E-25 1.5E-29 217.0 16.7 159 387-641 18-181 (182)
17 4a2a_A Cell division protein F 99.9 1.7E-24 5.7E-29 243.6 17.7 198 152-380 169-394 (419)
18 1k8k_A ARP3, actin-like protei 99.9 1.7E-24 5.8E-29 245.5 15.7 227 137-379 107-387 (418)
19 2fxu_A Alpha-actin-1, actin, a 99.9 1.9E-24 6.4E-29 241.3 9.9 213 138-378 101-348 (375)
20 2zgy_A Plasmid segregation pro 99.9 2.3E-22 8E-27 219.4 11.2 227 110-377 72-319 (320)
21 3h0x_A 78 kDa glucose-regulate 99.9 1.7E-21 5.7E-26 186.8 14.6 146 391-631 2-152 (152)
22 3dob_A Heat shock 70 kDa prote 99.8 2.4E-21 8.1E-26 185.4 11.7 146 391-631 2-152 (152)
23 3dqg_A Heat shock 70 kDa prote 99.8 1.6E-21 5.6E-26 186.3 9.7 145 391-631 2-151 (151)
24 2op6_A Heat shock 70 kDa prote 99.8 7.6E-20 2.6E-24 176.3 12.9 146 391-631 2-152 (152)
25 4ehu_A Activator of 2-hydroxyi 99.8 6.8E-18 2.3E-22 180.1 20.0 187 162-381 68-256 (276)
26 1k8k_B ARP2, actin-like protei 99.7 2.9E-19 9.9E-24 200.4 2.7 213 138-378 105-363 (394)
27 3js6_A Uncharacterized PARM pr 99.7 2.1E-16 7.3E-21 173.8 14.8 207 138-381 114-338 (355)
28 4apw_A ALP12; actin-like prote 99.5 4.1E-15 1.4E-19 162.2 7.8 203 138-379 106-324 (329)
29 1q5l_A Chaperone protein DNAK; 99.5 5.6E-14 1.9E-18 131.6 8.9 99 386-497 14-117 (135)
30 3dwl_A Actin-related protein 3 99.4 1.2E-12 4.2E-17 147.1 10.2 222 138-378 124-395 (427)
31 3qb0_A Actin-related protein 4 99.3 1.1E-11 3.6E-16 140.9 16.4 178 2-244 24-209 (498)
32 3lof_A Heat shock 70 kDa prote 99.2 2.6E-11 9E-16 110.2 10.4 82 619-701 3-85 (113)
33 4fo0_A Actin-related protein 8 99.1 7.5E-10 2.6E-14 130.8 18.0 103 130-245 186-294 (593)
34 2d0o_A DIOL dehydratase-reacti 99.1 1.2E-09 4.1E-14 121.0 15.7 196 151-379 368-604 (610)
35 1nbw_A Glycerol dehydratase re 99.1 9.6E-10 3.3E-14 122.3 14.2 192 153-377 372-604 (607)
36 2p32_A Heat shock 70 kDa prote 99.0 4.4E-10 1.5E-14 103.1 6.5 80 620-700 13-93 (120)
37 1ud0_A HSC70, 70 kDa heat-shoc 98.9 1.1E-09 3.7E-14 99.6 4.9 77 623-700 2-79 (113)
38 1hux_A Activator of (R)-2-hydr 98.8 3.2E-07 1.1E-11 96.7 23.3 172 167-380 76-257 (270)
39 2ews_A Pantothenate kinase; PA 98.1 0.00018 6.3E-09 75.6 19.5 75 298-377 207-286 (287)
40 4am6_A Actin-like protein ARP8 97.7 7.2E-05 2.5E-09 85.9 9.5 125 138-279 222-347 (655)
41 2ivn_A O-sialoglycoprotein end 96.9 0.21 7E-06 53.7 24.6 65 310-379 228-298 (330)
42 3mdq_A Exopolyphosphatase; str 96.7 0.28 9.6E-06 52.2 23.6 78 154-238 93-170 (315)
43 3h3n_X Glycerol kinase; ATP-bi 96.6 0.049 1.7E-06 62.3 17.8 83 298-384 372-455 (506)
44 2e2o_A Hexokinase; acetate and 96.5 0.72 2.5E-05 48.4 25.6 48 331-379 239-287 (299)
45 1t6c_A Exopolyphosphatase; alp 96.5 0.013 4.5E-07 62.6 11.8 77 154-238 101-177 (315)
46 3jvp_A Ribulokinase; PSI-II, N 96.4 0.044 1.5E-06 63.7 16.4 80 298-382 409-490 (572)
47 4e1j_A Glycerol kinase; struct 96.3 0.013 4.5E-07 67.4 11.1 84 298-384 392-477 (520)
48 2ch5_A NAGK protein; transfera 96.2 1.7 5.8E-05 46.6 27.3 61 136-206 70-133 (347)
49 3vov_A Glucokinase, hexokinase 96.2 0.57 1.9E-05 49.4 22.5 44 163-211 98-141 (302)
50 2i7n_A Pantothenate kinase 1; 96.1 0.025 8.6E-07 60.9 11.3 45 333-377 307-358 (360)
51 3vgl_A Glucokinase; ROK family 96.1 0.4 1.4E-05 51.1 21.0 44 163-211 96-139 (321)
52 3l0q_A Xylulose kinase; xlylul 95.9 0.01 3.6E-07 68.8 7.7 84 297-384 408-494 (554)
53 4db3_A Glcnac kinase, N-acetyl 95.8 1.1 3.7E-05 47.8 22.9 44 163-211 120-163 (327)
54 3i8b_A Xylulose kinase; strain 95.8 0.014 4.8E-07 66.9 8.0 79 299-382 395-474 (515)
55 4bc3_A Xylulose kinase; transf 95.6 0.015 5.1E-07 67.2 7.4 76 305-381 408-483 (538)
56 3hz6_A Xylulokinase; xylulose, 95.6 0.016 5.6E-07 66.4 7.6 81 298-384 374-455 (511)
57 3lof_A Heat shock 70 kDa prote 95.6 0.046 1.6E-06 48.8 8.9 81 700-793 3-83 (113)
58 2zf5_O Glycerol kinase; hypert 95.5 0.02 6.7E-07 65.5 7.7 80 299-383 365-444 (497)
59 3ll3_A Gluconate kinase; xylul 95.5 0.018 6.2E-07 65.9 7.3 82 298-384 363-445 (504)
60 2gup_A ROK family protein; sug 95.5 1.9 6.6E-05 44.9 22.7 42 163-211 94-135 (292)
61 2itm_A Xylulose kinase, xylulo 95.5 0.013 4.5E-07 66.7 6.1 82 298-383 356-438 (484)
62 2qm1_A Glucokinase; alpha-beta 95.5 0.85 2.9E-05 48.4 20.3 44 163-211 108-151 (326)
63 3ezw_A Glycerol kinase; glycer 95.4 0.019 6.4E-07 66.2 7.2 84 297-384 370-454 (526)
64 4htl_A Beta-glucoside kinase; 95.4 0.49 1.7E-05 49.8 17.9 49 331-379 237-291 (297)
65 3ifr_A Carbohydrate kinase, FG 95.4 0.023 7.7E-07 65.2 7.8 82 298-384 370-452 (508)
66 3g25_A Glycerol kinase; IDP007 95.3 0.027 9.3E-07 64.4 8.0 83 298-384 373-456 (501)
67 3r8e_A Hypothetical sugar kina 95.2 0.35 1.2E-05 51.6 16.2 45 162-211 116-161 (321)
68 2p3r_A Glycerol kinase; glycer 94.9 0.036 1.2E-06 63.5 7.5 83 298-384 370-453 (510)
69 2d4w_A Glycerol kinase; alpha 94.7 0.052 1.8E-06 62.1 8.3 83 298-384 372-455 (504)
70 2w40_A Glycerol kinase, putati 94.5 0.061 2.1E-06 61.5 8.3 82 299-384 376-459 (503)
71 2dpn_A Glycerol kinase; thermu 94.5 0.048 1.6E-06 62.3 7.2 80 299-382 368-448 (495)
72 2uyt_A Rhamnulokinase; rhamnos 94.3 0.065 2.2E-06 61.0 7.8 79 296-379 360-439 (489)
73 2ap1_A Putative regulator prot 93.7 2.7 9.2E-05 44.6 18.8 44 163-211 120-163 (327)
74 2hoe_A N-acetylglucosamine kin 93.3 2.1 7.1E-05 46.7 17.5 67 135-211 147-229 (380)
75 3en9_A Glycoprotease, O-sialog 93.2 12 0.00041 42.7 24.2 183 136-355 72-272 (540)
76 3eno_A Putative O-sialoglycopr 92.8 7.7 0.00026 41.3 20.5 67 310-381 233-305 (334)
77 1z6r_A MLC protein; transcript 92.1 3.8 0.00013 45.0 17.6 44 163-211 186-229 (406)
78 2p32_A Heat shock 70 kDa prote 91.4 0.51 1.7E-05 42.4 7.7 79 701-792 13-91 (120)
79 4e81_A Chaperone protein DNAK; 91.2 0.78 2.7E-05 45.9 9.7 68 706-791 146-213 (219)
80 1ud0_A HSC70, 70 kDa heat-shoc 90.1 0.66 2.3E-05 41.1 7.2 73 707-792 5-77 (113)
81 1zc6_A Probable N-acetylglucos 89.9 21 0.0007 37.2 26.1 64 306-378 227-292 (305)
82 3h6e_A Carbohydrate kinase, FG 89.9 0.25 8.5E-06 56.0 5.1 72 304-380 362-436 (482)
83 3cer_A Possible exopolyphospha 89.6 1.8 6E-05 46.6 11.3 80 154-238 106-191 (343)
84 1bdg_A Hexokinase; phosphotran 89.1 14 0.00048 41.0 18.6 62 144-212 166-229 (451)
85 1u6z_A Exopolyphosphatase; alp 87.2 2.7 9.3E-05 47.8 11.4 74 156-238 102-176 (513)
86 1u00_A HSC66, chaperone protei 86.6 1.3 4.4E-05 44.6 7.4 70 704-791 141-210 (227)
87 3hi0_A Putative exopolyphospha 82.1 4.2 0.00014 46.1 9.9 73 154-236 104-177 (508)
88 1iv0_A Hypothetical protein; r 82.0 0.84 2.9E-05 39.3 3.1 21 1-21 1-21 (98)
89 2kho_A Heat shock protein 70; 81.9 2.2 7.4E-05 49.7 7.6 68 706-791 534-601 (605)
90 2aa4_A Mannac kinase, putative 81.7 11 0.00037 38.9 12.4 121 1-211 1-138 (289)
91 3d2f_A Heat shock protein homo 81.6 2.4 8.2E-05 50.0 7.9 75 703-790 548-622 (675)
92 3o8m_A Hexokinase; rnaseh-like 80.7 24 0.00081 39.5 15.1 59 149-214 184-244 (485)
93 1woq_A Inorganic polyphosphate 79.8 43 0.0015 33.9 16.1 45 163-211 114-158 (267)
94 3epq_A Putative fructokinase; 79.4 14 0.00049 38.5 12.3 51 153-211 90-140 (302)
95 4b9q_A Chaperone protein DNAK; 79.4 5.5 0.00019 46.3 9.9 66 709-792 537-602 (605)
96 3aap_A Ectonucleoside triphosp 76.9 2.9 0.0001 45.0 6.1 45 164-211 108-157 (353)
97 2yhx_A Hexokinase B; transfera 76.6 9.1 0.00031 42.6 10.2 56 151-213 164-221 (457)
98 2yhw_A Bifunctional UDP-N-acet 76.2 36 0.0012 36.0 14.6 44 163-211 131-174 (343)
99 1vhx_A Putative holliday junct 74.3 1.6 5.4E-05 40.8 2.7 21 1-21 3-23 (150)
100 1z05_A Transcriptional regulat 73.4 32 0.0011 37.7 13.7 44 163-211 208-251 (429)
101 1nbw_A Glycerol dehydratase re 71.3 14 0.00047 41.7 9.7 44 138-181 131-175 (607)
102 4g9i_A Hydrogenase maturation 68.6 8.9 0.0003 45.6 8.0 65 312-381 691-761 (772)
103 2d0o_A DIOL dehydratase-reacti 64.6 22 0.00075 40.0 9.5 46 136-181 127-173 (610)
104 3pdy_A Plectin; cytoskeleton, 62.7 35 0.0012 33.3 10.0 49 736-785 106-154 (210)
105 1hjr_A Holliday junction resol 61.7 7.4 0.00025 36.5 4.5 19 1-19 1-19 (158)
106 3ttc_A HYPF, transcriptional r 61.4 13 0.00046 43.1 7.5 65 310-379 583-651 (657)
107 3cj1_A Ectonucleoside triphosp 60.5 13 0.00045 41.3 7.0 20 193-212 189-208 (456)
108 3qbx_A Anhydro-N-acetylmuramic 60.1 15 0.00052 39.3 7.1 69 306-379 261-336 (371)
109 1nu0_A Hypothetical protein YQ 58.1 7.1 0.00024 35.8 3.6 21 2-22 4-24 (138)
110 3cqy_A Anhydro-N-acetylmuramic 57.7 17 0.00057 39.1 6.9 68 305-378 267-341 (370)
111 4ep4_A Crossover junction endo 55.4 7.7 0.00026 36.7 3.4 20 1-20 1-20 (166)
112 3s84_A Apolipoprotein A-IV; fo 55.1 30 0.001 35.5 8.1 78 619-697 64-147 (273)
113 3djc_A Type III pantothenate k 55.0 6.9 0.00024 40.2 3.3 20 3-22 4-23 (266)
114 3mcp_A Glucokinase; structural 53.5 1E+02 0.0036 32.9 12.6 113 3-204 11-158 (366)
115 3hm8_A Hexokinase-3; glucose, 53.5 96 0.0033 34.1 12.3 58 149-213 159-219 (445)
116 3vth_A Hydrogenase maturation 53.0 16 0.00056 43.2 6.5 65 311-380 678-748 (761)
117 2w40_A Glycerol kinase, putati 53.0 7.7 0.00026 43.9 3.6 20 2-21 5-24 (503)
118 3ll3_A Gluconate kinase; xylul 51.2 8.9 0.0003 43.4 3.7 20 2-21 5-24 (504)
119 2dpn_A Glycerol kinase; thermu 51.0 7.2 0.00025 44.0 2.9 20 2-21 3-22 (495)
120 3ezw_A Glycerol kinase; glycer 49.4 8.9 0.00031 43.6 3.4 20 2-21 5-24 (526)
121 3h3n_X Glycerol kinase; ATP-bi 48.1 9.3 0.00032 43.2 3.3 20 2-21 6-25 (506)
122 3l0q_A Xylulose kinase; xlylul 48.1 11 0.00039 43.0 4.0 20 2-21 6-25 (554)
123 2p3r_A Glycerol kinase; glycer 47.6 11 0.00037 42.7 3.7 20 2-21 4-23 (510)
124 3ifr_A Carbohydrate kinase, FG 47.6 11 0.00039 42.5 3.9 21 2-22 8-28 (508)
125 3g25_A Glycerol kinase; IDP007 47.1 9.8 0.00033 43.0 3.2 20 2-21 7-26 (501)
126 3cet_A Conserved archaeal prot 46.6 18 0.00061 38.2 4.8 40 166-212 106-145 (334)
127 4bc3_A Xylulose kinase; transf 46.1 12 0.0004 42.7 3.7 20 2-21 11-30 (538)
128 2zf5_O Glycerol kinase; hypert 45.7 11 0.00036 42.6 3.2 20 2-21 4-23 (497)
129 3i8b_A Xylulose kinase; strain 45.6 11 0.00039 42.6 3.4 18 2-19 6-23 (515)
130 3h6e_A Carbohydrate kinase, FG 45.1 8.7 0.0003 43.2 2.3 20 2-21 7-26 (482)
131 3r6n_A Desmoplakin; spectrin r 45.0 42 0.0014 37.1 7.8 127 658-787 8-144 (450)
132 3hz6_A Xylulokinase; xylulose, 44.9 12 0.00041 42.3 3.5 20 2-21 6-25 (511)
133 3zx3_A Ectonucleoside triphosp 44.7 31 0.0011 38.1 6.7 44 167-212 151-199 (452)
134 3jvp_A Ribulokinase; PSI-II, N 44.2 12 0.00041 43.0 3.4 19 2-20 6-24 (572)
135 2uyt_A Rhamnulokinase; rhamnos 43.5 10 0.00036 42.5 2.7 19 2-20 5-23 (489)
136 4e1j_A Glycerol kinase; struct 42.0 15 0.00051 41.7 3.7 20 2-21 27-46 (520)
137 1hnj_A Beta-ketoacyl-acyl carr 42.0 28 0.00094 36.3 5.6 50 306-358 212-261 (317)
138 2itm_A Xylulose kinase, xylulo 41.8 12 0.00042 41.9 2.9 19 3-21 2-20 (484)
139 3f31_A Spectrin alpha chain, b 41.4 1.7E+02 0.0058 26.5 10.4 32 675-706 12-43 (149)
140 3o8m_A Hexokinase; rnaseh-like 40.2 60 0.002 36.2 8.1 30 193-222 79-109 (485)
141 3f9m_A Glucokinase; hexokinase 40.1 66 0.0022 35.7 8.4 51 193-246 76-135 (470)
142 3kbt_A Beta-I spectrin, spectr 39.8 1.6E+02 0.0055 30.3 11.3 48 737-785 112-159 (326)
143 2e1z_A Propionate kinase; TDCD 39.7 1.1E+02 0.0038 33.1 9.8 45 308-356 311-356 (415)
144 2d4w_A Glycerol kinase; alpha 39.5 14 0.00047 41.7 2.9 20 2-21 3-22 (504)
145 1u5p_A Spectrin alpha chain, b 39.4 2.4E+02 0.0081 26.9 11.8 49 737-786 111-159 (216)
146 3s84_A Apolipoprotein A-IV; fo 38.0 1.1E+02 0.0038 31.2 9.2 102 616-721 83-191 (273)
147 3ven_A O-carbamoyltransferase 37.6 45 0.0016 38.0 6.7 78 300-382 280-360 (576)
148 2yhx_A Hexokinase B; transfera 37.6 1E+02 0.0036 34.0 9.6 52 193-244 60-117 (457)
149 2iak_A Bullous pemphigoid anti 37.2 45 0.0015 32.8 6.0 25 736-760 121-145 (224)
150 3f9m_A Glucokinase; hexokinase 36.9 1.6E+02 0.0055 32.5 10.9 58 149-213 183-243 (470)
151 1zbs_A Hypothetical protein PG 36.8 19 0.00066 37.2 3.3 68 306-379 211-280 (291)
152 1ub7_A 3-oxoacyl-[acyl-carrier 35.9 36 0.0012 35.5 5.3 48 308-358 216-263 (322)
153 3uul_A Utrophin; spectrin repe 35.9 71 0.0024 27.4 6.5 25 736-760 3-27 (118)
154 2y6x_A PSB27, photosystem II 1 35.4 2.2E+02 0.0076 24.7 11.4 99 650-753 9-109 (113)
155 4ehp_B Catenin alpha-1; adhere 34.4 60 0.0021 28.2 5.3 81 698-783 25-109 (111)
156 3lbx_B Beta-I spectrin, spectr 34.3 2.1E+02 0.0073 26.7 10.2 48 737-785 112-159 (185)
157 2ebd_A 3-oxoacyl-[acyl-carrier 34.2 38 0.0013 35.0 5.1 47 309-358 207-253 (309)
158 3nmd_A CGMP dependent protein 34.2 81 0.0028 25.1 5.6 44 606-650 28-71 (72)
159 1zxo_A Conserved hypothetical 32.5 19 0.00064 37.3 2.3 66 309-378 212-277 (291)
160 3edv_A Spectrin beta chain, br 32.4 4.2E+02 0.014 27.0 14.4 26 736-761 220-245 (323)
161 3khy_A Propionate kinase; csgi 32.2 1.5E+02 0.0051 31.7 9.2 43 309-355 295-338 (384)
162 2h3g_X Biosynthetic protein; p 32.0 26 0.0009 35.8 3.3 20 3-22 2-21 (268)
163 3uun_A Dystrophin; triple heli 31.8 85 0.0029 26.8 6.4 24 736-759 3-26 (119)
164 2kmf_A Photosystem II 11 kDa p 30.5 2.7E+02 0.0094 24.3 10.9 97 651-752 14-112 (115)
165 3kbt_A Beta-I spectrin, spectr 30.2 2.1E+02 0.0072 29.3 10.3 22 736-757 218-239 (326)
166 3bex_A Type III pantothenate k 30.2 28 0.00094 35.2 3.1 21 2-22 4-24 (249)
167 3hm8_A Hexokinase-3; glucose, 30.1 1.3E+02 0.0043 33.1 8.5 33 193-226 58-90 (445)
168 1quu_A Human skeletal muscle a 29.5 4.1E+02 0.014 26.0 12.1 43 739-782 133-175 (250)
169 1saz_A Probable butyrate kinas 29.3 34 0.0012 36.9 3.9 49 331-379 295-348 (381)
170 1mzj_A Beta-ketoacylsynthase I 29.3 54 0.0018 34.5 5.4 47 309-358 228-274 (339)
171 2l7b_A Apolipoprotein E, APO-E 29.1 4.1E+02 0.014 27.4 11.9 135 619-754 112-265 (307)
172 1zow_A 3-oxoacyl-[acyl-carrier 29.0 53 0.0018 34.0 5.2 48 308-358 208-255 (313)
173 2x3e_A 3-oxoacyl-[acyl-carrier 28.9 58 0.002 34.1 5.5 47 309-358 221-267 (331)
174 3zyy_X Iron-sulfur cluster bin 28.9 1.9E+02 0.0065 33.3 10.0 99 193-347 205-305 (631)
175 4ijn_A Acetate kinase, acetoki 27.3 1.3E+02 0.0046 32.3 7.9 46 307-356 303-349 (398)
176 1msz_A DNA-binding protein smu 26.8 47 0.0016 27.5 3.2 28 140-167 34-61 (86)
177 1saz_A Probable butyrate kinas 26.6 45 0.0015 35.9 4.2 20 2-21 3-22 (381)
178 4adz_A CSOR; transcription, co 25.1 3.8E+02 0.013 24.1 9.3 49 672-720 46-97 (136)
179 4am6_A Actin-like protein ARP8 23.8 34 0.0012 39.5 2.5 25 332-356 501-525 (655)
180 3htv_A D-allose kinase, alloki 23.4 1.7E+02 0.0057 30.3 7.8 48 331-378 239-298 (310)
181 1u6e_A 3-oxoacyl-[acyl-carrier 23.4 79 0.0027 33.0 5.3 46 309-357 229-274 (335)
182 3uul_A Utrophin; spectrin repe 22.9 3.4E+02 0.012 22.8 14.6 88 654-756 4-99 (118)
183 3fb2_A Spectrin alpha chain, b 22.8 1.4E+02 0.0049 28.7 6.8 134 653-787 14-170 (218)
184 1cun_A Protein (alpha spectrin 22.7 4.8E+02 0.016 24.5 11.4 47 737-784 108-154 (213)
185 4dfe_A 3-oxoacyl-[acyl-carrier 22.5 93 0.0032 32.6 5.6 49 307-358 229-277 (333)
186 3bex_A Type III pantothenate k 22.2 2.7E+02 0.0093 27.7 8.8 46 298-344 178-223 (249)
187 2f9w_A Pantothenate kinase; CO 22.1 54 0.0019 33.5 3.5 19 3-21 25-44 (271)
188 3ist_A Glutamate racemase; str 21.4 82 0.0028 32.1 4.7 44 330-376 177-220 (269)
189 1sz2_A Glucokinase, glucose ki 21.2 6.8E+02 0.023 25.6 17.8 231 122-377 52-324 (332)
190 3uun_A Dystrophin; triple heli 21.2 3.6E+02 0.012 22.5 14.4 89 653-756 3-99 (119)
191 1ted_A PKS18; thiolase fold, s 20.8 75 0.0026 34.2 4.6 47 309-358 284-330 (393)
192 1bdg_A Hexokinase; phosphotran 20.6 2E+02 0.007 31.5 8.1 23 193-215 67-89 (451)
193 3s5m_A Falcilysin; M16 metallo 20.5 5.7E+02 0.019 31.9 12.8 127 603-752 483-629 (1193)
194 2q2r_A Glucokinase 1, putative 20.5 54 0.0018 35.1 3.3 20 1-20 29-48 (373)
195 3u0c_A Invasin IPAB, 62 kDa an 20.1 4.8E+02 0.017 24.0 8.8 92 685-786 103-197 (201)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=6e-110 Score=990.81 Aligned_cols=646 Identities=39% Similarity=0.687 Sum_probs=589.1
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHH
Q 003056 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v 80 (852)
|++||||||||||+||++.+|+++++.|+.|+|.+||+|+|.+++++||..|..++..+|.++++++|||||+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHH
Q 003056 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (852)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa 160 (852)
+.+.+++||.+++..+|.+.+.+.+.|+...++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999998889999999888877889999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceeeechhHHHHHHhhhhcCCCCC--CCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHH
Q 003056 161 TIAGLHPLRLFHETTATALAYGIYKTDLPE--NDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVL 238 (852)
Q Consensus 161 ~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~--~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l 238 (852)
++|||++++||+||+|||++|++.+.+++. ..+.++||||+||||||+|++++.+|.++|+++.|+.++||++||+.|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 999999999999999999999997754442 347889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHH
Q 003056 239 FQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPL 318 (852)
Q Consensus 239 ~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i 318 (852)
++||..+|..++++++..+++++.||+.+||++|+.||.+..+.+.+++++++.++.+.|||++|+++|+++++++..+|
T Consensus 242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i 321 (675)
T 3d2f_A 242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV 321 (675)
T ss_dssp HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhcCCCcccceEEeeecccc
Q 003056 319 EKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFS 398 (852)
Q Consensus 319 ~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls~~~~~~~~~~~d~~~~~ 398 (852)
+++|+.++++..+|+.|+||||+||+|+|+++|+++||.++..++||++|||+|||++|+.+++.++++++.+.|++||+
T Consensus 322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~s 401 (675)
T 3d2f_A 322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYS 401 (675)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSC
T ss_pred HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecc
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred EEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCcEEEEEEEeccccC-C-CCccceeEEEcCCCCCCCC
Q 003056 399 ISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSEL-R-APAKISTYTIGPFQSTKSE 476 (852)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~~~i~~~y~~~~~~-~-~~~~ig~~~i~~i~~~~~~ 476 (852)
|||+|.++ . +...+.+||++|+++|++++.+|++..+|++.++|++++.+ . +|..||+|.|+|+++.+.+
T Consensus 402 lgi~~~~~-~-------~~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 402 VSYSWDKQ-V-------EDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp EEEEECCT-T-------CSCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eEeeecCC-C-------CCcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCC
Confidence 99999875 1 12258999999999999999999999999999999888777 4 8999999999999988777
Q ss_pred c-ceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCccccccccccCCCCCCCCCC
Q 003056 477 R-AKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQGTTD 555 (852)
Q Consensus 477 ~-~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (852)
. ++|+|+|.+|.||+|+|+++.++++.+.+
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~------------------------------------------------- 504 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAG------------------------------------------------- 504 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEEECC-----------------------------------------------------
T ss_pred CcceEEEEEEEcCCCcEEEEEEEEeeccccc-------------------------------------------------
Confidence 5 59999999999999999998776531100
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 003056 556 APGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVEAYVY 635 (852)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy 635 (852)
+.|.++++..++|.... ++||.++|++|++++.+|..+|+.++++.++||.||+|||
T Consensus 505 ----------------------~~~~t~~~~~i~i~~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~ 561 (675)
T 3d2f_A 505 ----------------------SDTKTVKKDDLTIVAHT-FGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIY 561 (675)
T ss_dssp ------------------------CCCCEEEECEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------ccccCcceeeEEEecCC-CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 01455667788887654 3799999999999999999999999999999999999999
Q ss_pred HhHHHhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHH
Q 003056 636 DMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCI 715 (852)
Q Consensus 636 ~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l 715 (852)
++|++|++.|..++++++|++|...|+++++|||++++++++++|++|+++|+++++||..|++|++.||.+++.|++.|
T Consensus 562 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~ 641 (675)
T 3d2f_A 562 TLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEA 641 (675)
T ss_dssp HHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHH
Confidence 99999986789999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCC
Q 003056 716 NSYREAALSSD 726 (852)
Q Consensus 716 ~~~~~~~~~~~ 726 (852)
++++.++..+.
T Consensus 642 ~~~~~~~~~~~ 652 (675)
T 3d2f_A 642 SQMAAMAEKLA 652 (675)
T ss_dssp -----------
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=6.3e-97 Score=873.47 Aligned_cols=589 Identities=29% Similarity=0.469 Sum_probs=542.8
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcC-CceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHH
Q 003056 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGD-KQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPE 79 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~ 79 (852)
..|||||||||||+||++.+|.++++.|..|.|++||+|+|.+ +++++|..|..++..+|.++++++|||||+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 1499999999999999999999999999999999999999975 579999999999999999999999999999999999
Q ss_pred HHHhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHH
Q 003056 80 LQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDA 159 (852)
Q Consensus 80 v~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~A 159 (852)
++.+.+++||.++...+|.+.+.+ .+ ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE--CC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999999998888887765 23 68999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeC----CeEEEEEEeCCCCcccHHHH
Q 003056 160 ATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKK----GQLKILGHSFDRSVGGRDFD 235 (852)
Q Consensus 160 a~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~----~~~~vl~~~~d~~lGG~~~D 235 (852)
+++|||++++||+||+|||++|++.+.. .+.++||||+||||||++++++.+ +.++++++.|+.++||.+||
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~~----~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D 233 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGT----GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSCC----SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhccC----CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHH
Confidence 9999999999999999999999986532 368999999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCC----cceEEEecHHHHHHHHHHHH
Q 003056 236 EVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPIL 311 (852)
Q Consensus 236 ~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~----~d~~~~itr~efe~l~~~~~ 311 (852)
.+|++||.++|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.+.|||++|+++|++++
T Consensus 234 ~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~ 313 (605)
T 4b9q_A 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (605)
T ss_dssp HHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998877654 67899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhcCCCcccceEE
Q 003056 312 ERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQV 391 (852)
Q Consensus 312 ~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls~~~~~~~~~~ 391 (852)
+++..+|+++|+.+++...+|+.|+||||+||+|+|+++|+++||.++...+||++|||+|||++|+.+++. ++++.+
T Consensus 314 ~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~l 391 (605)
T 4b9q_A 314 NRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLL 391 (605)
T ss_dssp HHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986 568999
Q ss_pred eeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCccceeEE
Q 003056 392 NESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTYT 466 (852)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~~~ 466 (852)
.|++|++||+++.++ .+.+||++|+++|++++.+|.+..+ +.|.+ |+|+..+ .+|..||+|.
T Consensus 392 ~dv~p~slgie~~~g------------~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~~n~~lg~~~ 458 (605)
T 4b9q_A 392 LDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAADNKSLGQFN 458 (605)
T ss_dssp ECBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGGGSEEEEEEE
T ss_pred EeeeeeEEEEEEcCC------------EEEEEEeCCCcCCcceEEEeeeecccCceEEEEE-EeccccccccCCEeeEEE
Confidence 999999999999876 6889999999999999999987554 67777 4566666 8999999999
Q ss_pred EcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCccccccccccC
Q 003056 467 IGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 546 (852)
Q Consensus 467 i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (852)
|.|+|+.+.|.++|+|+|.+|.||+|+|++. +
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~-------------------------~----------------------- 490 (605)
T 4b9q_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAK-------------------------D----------------------- 490 (605)
T ss_dssp EECCCCCSTTCCCEEEEEEECTTSCEEEEEE-------------------------E-----------------------
T ss_pred EeCCCCCcCCCceEEEEEEEcCCcEEEEEEE-------------------------e-----------------------
Confidence 9999999889999999999999999999986 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHHH
Q 003056 547 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 626 (852)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 626 (852)
+.+.++..++|.... +||+++|++|++++.++..+|+..+++.++
T Consensus 491 ---------------------------------~~tg~~~~i~i~~~~--~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~ 535 (605)
T 4b9q_A 491 ---------------------------------KNSGKEQKITIKASS--GLNEDEIQKMVRDAEANAEADRKCEELVQT 535 (605)
T ss_dssp ---------------------------------TTTCCEECCEEESCC--SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCCcEEEEEecCCC--CCCHHHHHHHHHHhhhhHhhHHHHHHHHHH
Confidence 111223456665543 799999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHh
Q 003056 627 KNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 700 (852)
Q Consensus 627 kN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e 700 (852)
||.||+|+|++|+.|. ++..++++++|+.|...|+++++||+.+ ++++|++++++|++.++||..++++
T Consensus 536 ~n~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 536 RNQGDHLLHSTRKQVE-EAGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHH-HHGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHH-hhhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999997 5788999999999999999999999975 5889999999999999999998764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=8.1e-96 Score=864.00 Aligned_cols=588 Identities=29% Similarity=0.479 Sum_probs=539.1
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEc-CCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHH
Q 003056 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFG-DKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v 80 (852)
.+||||||||||+||++.+|.++++.|..|.|++||+|+|. +++++||..|..+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999999999999999999999999999995 46799999999999999999999999999999999999
Q ss_pred HHhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHH
Q 003056 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (852)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa 160 (852)
+...+++||.++...+|.+.+.+ .| ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 98899999999888888888776 34 589999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee----CCeEEEEEEeCCCCcccHHHHH
Q 003056 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDE 236 (852)
Q Consensus 161 ~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~----~~~~~vl~~~~d~~lGG~~~D~ 236 (852)
++|||++++|++||+|||++|++.+.. .+.++||||+||||||+|++++. ++.++|+++.|+.++||++||.
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~~----~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT----GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSSS----SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhcccC----CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 999999999999999999999976531 36889999999999999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCC----cceEEEecHHHHHHHHHHHHH
Q 003056 237 VLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPILE 312 (852)
Q Consensus 237 ~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~----~d~~~~itr~efe~l~~~~~~ 312 (852)
.|++||.++|+.++++++..+++++.+|+.+||++|+.||.+..+.+.++++.++ .++.+.|||++|+++|+++++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~ 314 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999889999887653 578889999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhcCCCcccceEEe
Q 003056 313 RVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVN 392 (852)
Q Consensus 313 ~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls~~~~~~~~~~~ 392 (852)
++..+|+++|+.+++...+|+.|+||||+||+|+|+++|+++||.++...+||++|||+|||++|+.+++. ++++.+.
T Consensus 315 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~ 392 (605)
T 2kho_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLL 392 (605)
T ss_dssp GGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCS
T ss_pred HHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEE
Confidence 99999999999999999999999999999999999999999999888999999999999999999999876 5789999
Q ss_pred eeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCccceeEEE
Q 003056 393 ESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTYTI 467 (852)
Q Consensus 393 d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~~~i 467 (852)
|++|++||+++.++ .+.+||++|+++|++++.+|.+..+ +.|.+ |+++..+ .+|..||+|.|
T Consensus 393 dv~p~slgi~~~~g------------~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~~n~~lg~~~l 459 (605)
T 2kho_A 393 DVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAADNKSLGQFNL 459 (605)
T ss_dssp BCCCCCEEEEETTT------------EEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGGGSEEEEEEEE
T ss_pred eeeeeeccccccCC------------ceEEEEecccccCccceEEEEecCCCceEEEEEE-EeccCcccccCcEEeEEEe
Confidence 99999999999876 6889999999999999999987543 66777 4566666 78999999999
Q ss_pred cCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCccccccccccCC
Q 003056 468 GPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGT 547 (852)
Q Consensus 468 ~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (852)
.++|+.+.|.++|+|+|.+|.||+|+|++. |
T Consensus 460 ~~i~~~~~g~~~i~v~f~id~~gil~v~a~-------------------------~------------------------ 490 (605)
T 2kho_A 460 DGINPAPRGMPQIEVTFDIDADGILHVSAK-------------------------D------------------------ 490 (605)
T ss_dssp ECCCSCCTTCSCEEEEEEECTTSCEEEEEE-------------------------E------------------------
T ss_pred cCCCCCCCCCcEEEEEEEEcCCCceeEEEE-------------------------E------------------------
Confidence 999998888889999999999999999885 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 003056 548 ADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRK 627 (852)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ak 627 (852)
+.+.++..++|... ++||.++|++|++++.+|..+|+.++++.++|
T Consensus 491 --------------------------------~~tg~~~~i~i~~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~ 536 (605)
T 2kho_A 491 --------------------------------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFDELVQTR 536 (605)
T ss_dssp --------------------------------TTTCCEEEEEECTT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred --------------------------------cCCCceeecccccc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 11112345666554 47999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHh
Q 003056 628 NAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 700 (852)
Q Consensus 628 N~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e 700 (852)
|+||+|||++|++|++ +..++++++|+.|...|+++++|||++ ++++|++++++|+++++||..|++.
T Consensus 537 n~~e~~~~~~~~~l~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 537 NQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999975 889999999999999999999999954 7899999999999999999998763
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.7e-89 Score=802.65 Aligned_cols=541 Identities=33% Similarity=0.570 Sum_probs=498.7
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHHH
Q 003056 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQ 81 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v~ 81 (852)
.+||||||||||+||++.+|.++++.|+.|+|++||+|+|.+++++||..|..++.++|.++++++|||||+.++++.++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 84 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ 84 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHHH
Q 003056 82 RDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAAT 161 (852)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa~ 161 (852)
..++++||.++.. +|.+.+.+.+.+....++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++
T Consensus 85 ~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~ 163 (554)
T 1yuw_A 85 SDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGT 163 (554)
T ss_dssp HHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999999854 788889998888888999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHH
Q 003056 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (852)
Q Consensus 162 ~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~ 241 (852)
.|||++++|++||+|||++|++.+.. ..+.++||||+||||||++++++.++.++|+++.++.++||++||+.|++|
T Consensus 164 ~AGl~~~~li~EP~AAAlay~~~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 164 IAGLNVLRIINEPTAAAIAYGLDKKV---GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTCSTTC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEeCcHHHHHHHHHhhccC---CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999876531 136789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHH
Q 003056 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKA 321 (852)
Q Consensus 242 l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~ 321 (852)
|..+|..++++++..+++++.+|+.+||++|+.||.+..+.+.+++++++.++...|+|++|+++|+++++++..+|+++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~ 320 (554)
T 1yuw_A 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKA 320 (554)
T ss_dssp HHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcC-CCCcccCCchhHHHhhHHHhhhhhcC--CCcccceEEeeecccc
Q 003056 322 LAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEPRRTMNASECVARGCALQCAILSP--TFKVREFQVNESFPFS 398 (852)
Q Consensus 322 l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg-~~v~~~~n~deava~GAa~~aa~ls~--~~~~~~~~~~d~~~~~ 398 (852)
|+.+++...+|+.|+||||+||+|+|+++|++.|+ .++....||++|||+|||++|+.+++ .++++++.+.|++|++
T Consensus 321 L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~s 400 (554)
T 1yuw_A 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLS 400 (554)
T ss_dssp HHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSC
T ss_pred HHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeE
Confidence 99999999999999999999999999999999996 78889999999999999999999987 4678899999999999
Q ss_pred EEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecC----cEEEEEEEeccccC-CCCccceeEEEcCCCCC
Q 003056 399 ISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSG----TFTVDVQYADVSEL-RAPAKISTYTIGPFQST 473 (852)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~----~~~i~~~y~~~~~~-~~~~~ig~~~i~~i~~~ 473 (852)
||+++.++ .+.+||++|+++|++++.+|.+.. .+.|.++ +++..+ .+|..||+|.|.|+|+.
T Consensus 401 lgi~~~~g------------~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~-~ge~~~~~~n~~lg~~~l~~i~~~ 467 (554)
T 1yuw_A 401 LGIETAGG------------VMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVY-EGERAMTKDNNLLGKFELTGIPPA 467 (554)
T ss_dssp EEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEE-ESSSSBGGGSEEEEEEEEECCCCC
T ss_pred EEEEecCc------------eEEEEEECCCccCceeEEEeeeccCCCceEEEEEE-ecCccccccCcEEEEEEEeCCCCC
Confidence 99999865 688999999999999999888643 3677774 555555 78999999999999998
Q ss_pred CCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCccccccccccCCCCCCCC
Q 003056 474 KSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQGT 553 (852)
Q Consensus 474 ~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (852)
+.|.++|+|+|.+|.||+|+|++. |
T Consensus 468 ~~g~~~i~v~f~id~~gil~v~a~-------------------------~------------------------------ 492 (554)
T 1yuw_A 468 PRGVPQIEVTFDIDANGILNVSAV-------------------------D------------------------------ 492 (554)
T ss_dssp STTCCCEEEEEEECTTCCEEEEEE-------------------------E------------------------------
T ss_pred cccccEEEEEEEEccCceEEEEEE-------------------------e------------------------------
Confidence 888889999999999999999885 1
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 003056 554 TDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVEAY 633 (852)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~ 633 (852)
+.+.++..++|.... ++||.++|+++++++.+|+.+|+.++++.++||+||+|
T Consensus 493 --------------------------~~tg~~~~~~i~~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~ 545 (554)
T 1yuw_A 493 --------------------------KSTGKENKITITNDK-GRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESY 545 (554)
T ss_dssp --------------------------TTTCCEEEEEECCCS-SCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSC
T ss_pred --------------------------ccCCCceeEEEecCC-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 011123455665443 47999999999999999999999999999999999999
Q ss_pred HHHhHHHh
Q 003056 634 VYDMRNKL 641 (852)
Q Consensus 634 iy~~r~~L 641 (852)
||++|++|
T Consensus 546 ~~~~~~~l 553 (554)
T 1yuw_A 546 AFNMKATV 553 (554)
T ss_dssp CSCSCCCC
T ss_pred HHHHHHhh
Confidence 99999876
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=3.1e-79 Score=710.54 Aligned_cols=498 Identities=29% Similarity=0.506 Sum_probs=446.8
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHHH
Q 003056 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQ 81 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v~ 81 (852)
.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.+++++||..|..+...+| ++++++||+||+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~------ 75 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDY------ 75 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCC------
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCc------
Confidence 49999999999999999999999999999999999999998888999999999999999 99999999999843
Q ss_pred HhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHHH
Q 003056 82 RDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAAT 161 (852)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa~ 161 (852)
.+ . ..| ..++++++++++|++|+..++.+++.++.++|||||+||++.||+++++|++
T Consensus 76 --------~~----------~--~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 76 --------KV----------E--IEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp --------CE----------E--ETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred --------EE----------E--ECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 21 1 123 3689999999999999999999999999999999999999999999999999
Q ss_pred HcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHH
Q 003056 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (852)
Q Consensus 162 ~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~ 241 (852)
.|||++++|++||+|||++|++... .+.++||||+||||||++++++.++.++++++.++.++||++||+.|++|
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~-----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE-----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS-----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC-----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999998653 36899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCC----cceEEEecHHHHHHHHHHHHHHHHHH
Q 003056 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPILERVKRP 317 (852)
Q Consensus 242 l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~----~d~~~~itr~efe~l~~~~~~~i~~~ 317 (852)
|.++|+.++++++..+++++.+|+.+||++|+.||.+....+.+++++++ .++.+.|+|++|+++|+++++++..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 288 (509)
T 2v7y_A 209 LVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGP 288 (509)
T ss_dssp HHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999999998999999999999999999999998888998877652 46788999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhcCCCcccceEEeeeccc
Q 003056 318 LEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPF 397 (852)
Q Consensus 318 i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls~~~~~~~~~~~d~~~~ 397 (852)
|+++|+.+++...+|+.|+|+||+||+|+|+++|++.||.++....||++|||+|||++|+.+++. ++++.+.|++|+
T Consensus 289 i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~ 366 (509)
T 2v7y_A 289 VRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSS
T ss_pred HHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeecc
Confidence 999999999998999999999999999999999999999888899999999999999999999875 578899999999
Q ss_pred cEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecC----cEEEEEEEeccccC-CCCccceeEEEcCCCC
Q 003056 398 SISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSG----TFTVDVQYADVSEL-RAPAKISTYTIGPFQS 472 (852)
Q Consensus 398 ~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~----~~~i~~~y~~~~~~-~~~~~ig~~~i~~i~~ 472 (852)
+||+++.++ .+.+||++|+++|++++.+|.+.. .+.+.++ +++..+ .+|..||+|.|.++++
T Consensus 367 slgi~~~~~------------~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~-~ge~~~~~~~~~lg~~~l~~i~~ 433 (509)
T 2v7y_A 367 SLGIETMGG------------VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVL-QGERPMAADNKSLGRFQLTGIPP 433 (509)
T ss_dssp EEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEE-EESSSBGGGSEEEEEEEEECCCC
T ss_pred ccceeecCC------------ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEE-ecCccccccCcEEEEEEEeCCCC
Confidence 999999875 688999999999999999997644 3677775 455555 7899999999999999
Q ss_pred CCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCccccccccccCCCCCCC
Q 003056 473 TKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQG 552 (852)
Q Consensus 473 ~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (852)
.+.|.++|+|+|.+|.||+|+|++. |
T Consensus 434 ~~~g~~~i~v~f~id~~gil~v~a~-------------------------~----------------------------- 459 (509)
T 2v7y_A 434 APRGVPQIEVTFDIDANGIVHVRAK-------------------------D----------------------------- 459 (509)
T ss_dssp CCTTCSCEEEEEEECTTSCEEEEEE-------------------------E-----------------------------
T ss_pred CCCcccEEEEEEEEcCCceEEEEEE-------------------------E-----------------------------
Confidence 8888889999999999999999985 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 003056 553 TTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVE 631 (852)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 631 (852)
+.+.++..++|... .+||.++|+++++++.+|..+|+.++++.++||+||
T Consensus 460 ---------------------------~~~g~~~~~~i~~~--~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 460 ---------------------------LGTNKEQSITIKSS--SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp ---------------------------TTTCCEEEEEECSS--CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred ---------------------------cCCCcEEEEEEEec--CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 11112345666554 479999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=6.4e-64 Score=567.80 Aligned_cols=380 Identities=39% Similarity=0.658 Sum_probs=361.0
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHH
Q 003056 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v 80 (852)
|.+||||||||||+||++.+|.++++.|..|++++||+|+|.+++++||..|..+..++|.++++++||+||+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHH
Q 003056 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (852)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa 160 (852)
+...+.+||.+.. .+|...+.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 103 ~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~ 181 (404)
T 3i33_A 103 QSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAG 181 (404)
T ss_dssp HHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 9999999999986 578889999888887899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHH
Q 003056 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQ 240 (852)
Q Consensus 161 ~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~ 240 (852)
+.|||+++++++||+|||++|+..... ....+..+||||+||||||++++++.++.++++++.++..+||.+||+.|++
T Consensus 182 ~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 182 TITGLNVLRIINEPTAAAIAYGLDKKG-CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHTCEEEEEEEHHHHHHHHTTTTSSC-SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEeccHHHHHHHHHhhccc-ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999876531 1124688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHH
Q 003056 241 HFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEK 320 (852)
Q Consensus 241 ~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~ 320 (852)
++.++|..+++.++..+++.+.+|+.+||++|+.||.+....+.++.++++.++.+.|+|++|+++|+++++++..+|.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc-CCCCcccCCchhHHHhhHHHhhhhhcC
Q 003056 321 ALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILSP 382 (852)
Q Consensus 321 ~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f-g~~v~~~~n~deava~GAa~~aa~ls~ 382 (852)
+|+.+++...+|+.|+|+||+|++|+|+++|++.| +.++....||++|||+|||++|+++++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999 688889999999999999999998874
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.6e-62 Score=554.45 Aligned_cols=374 Identities=37% Similarity=0.655 Sum_probs=358.0
Q ss_pred EEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHHHH
Q 003056 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (852)
Q Consensus 3 viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v~~ 82 (852)
+||||||||||+||++.+|.++++.|..|.+++||+|+|.++++++|..|......+|.++++++|++||+.++++.++.
T Consensus 20 viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~ 99 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQK 99 (394)
T ss_dssp CEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHH
T ss_pred EEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHHHH
Q 003056 83 DLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATI 162 (852)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa~~ 162 (852)
..+.+||.+. ..+|...+.+.+.+....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus 100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 178 (394)
T 3qfu_A 100 DIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTI 178 (394)
T ss_dssp HHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999988 557888898888888889999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHH
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHF 242 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l 242 (852)
|||+++++++||+|||++|++.... .+.++||||+||||||++++++.++.+++++..++..+||.+||+.|++++
T Consensus 179 aGl~~~~li~Ep~Aaa~~~~~~~~~----~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 179 AGLNVLRIVNEPTAAAIAYGLDKSD----KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSCS----SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHHhhccCC----CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999876532 468899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHH
Q 003056 243 AAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKAL 322 (852)
Q Consensus 243 ~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l 322 (852)
.++|..+++.++..+++.+.+|+.+||++|+.||.+....+.++.++++.++...|+|++|+++++++++++..+|.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l 334 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVL 334 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc-CCCCcccCCchhHHHhhHHHhhhhhc
Q 003056 323 AETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILS 381 (852)
Q Consensus 323 ~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f-g~~v~~~~n~deava~GAa~~aa~ls 381 (852)
+.+++...+|+.|+|+||+|++|+|+++|++.| +.++....||++|||+|||++|++++
T Consensus 335 ~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 335 QDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999899999999999999999999999999 78898999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.5e-62 Score=557.25 Aligned_cols=378 Identities=26% Similarity=0.409 Sum_probs=344.7
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHH
Q 003056 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v 80 (852)
|.+||||||||||+||++.+|.++++.|..|.+++||+|+|.++++++|..|..+..++|.++++++|++||+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 36999999999999999988899999999999999999999999999999999999999999999999999999877654
Q ss_pred HHhhccCCceEeeCCCCceEEEEEEc----CceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHH
Q 003056 81 QRDLKSLPFAVTEGPDGYPLIHARYL----GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAV 156 (852)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al 156 (852)
+.. ..++.+.. .+|.+.+.+... +....++++++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 93 ~~~--~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THN--HASAHPQE-AGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGG--TTSCCCEE-ETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhh--ccccceec-CCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 433 33443333 478888887765 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHH
Q 003056 157 IDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDE 236 (852)
Q Consensus 157 ~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~ 236 (852)
++|++.|||++++|++||+|||++|+..... ...+.++||||+||||||++++++.++.++++++.++..+||.+||+
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~--~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEA--TISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC--------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhccccc--CCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 9999999999999999999999999875421 12478999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc--ccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHH
Q 003056 237 VLFQHFAAKFKEEYK--IDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERV 314 (852)
Q Consensus 237 ~l~~~l~~~~~~k~~--~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i 314 (852)
.|++++..+|..+++ .++..+++.+.+|+.+||++|+.||.+....+.++++.++.++...|||++|+++|+++++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 999999999999888 888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC--C------cccCCchhHHHhhHHHhhhhhcCC
Q 003056 315 KRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE--P------RRTMNASECVARGCALQCAILSPT 383 (852)
Q Consensus 315 ~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~--v------~~~~n~deava~GAa~~aa~ls~~ 383 (852)
..+|+++|+.+++...+|+.|+|+||+||+|+|+++|++.||.. + ...+||++|||+|||++|+.....
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999865 3 578999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.7e-60 Score=535.89 Aligned_cols=372 Identities=34% Similarity=0.577 Sum_probs=343.5
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcC-CceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHH
Q 003056 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGD-KQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v 80 (852)
.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.. ++++||..|..+..++|.++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 489999999999999999999999999999999999999964 6789999999999999999999999999999999999
Q ss_pred HHhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHH
Q 003056 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (852)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa 160 (852)
+...+.+||.++...+|.+.+.+ .| ..++++++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 98888999999888888877766 34 579999999999999999999999988999999999999999999999999
Q ss_pred HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee----CCeEEEEEEeCCCCcccHHHHH
Q 003056 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDE 236 (852)
Q Consensus 161 ~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~----~~~~~vl~~~~d~~lGG~~~D~ 236 (852)
+.||++++++++||+|||++|++... ..+.++||||+||||||++++++. ++.++++++.++..+||++||+
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC-----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC----CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 99999999999999999999987542 136789999999999999999998 6788999988889999999999
Q ss_pred HHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccC---C-cceEEEecHHHHHHHHHHHHH
Q 003056 237 VLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLME---E-KDVRGFIKRDEFEQISAPILE 312 (852)
Q Consensus 237 ~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~---~-~d~~~~itr~efe~l~~~~~~ 312 (852)
.|++++.++|..+++.++..+++.+.+|+..||++|+.||......+.++.+.+ + .++.+.|+|++|+++|+++++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~ 314 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 999999999999999898889999999999999999999998888888887654 2 567789999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhc
Q 003056 313 RVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (852)
Q Consensus 313 ~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls 381 (852)
++..+|.++|+.+++...+|+.|+|+||+|++|+|+++|++.||.++....||++|||+|||++|++++
T Consensus 315 ~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 315 RSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 999999999999999888999999999999999999999999998888999999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=3.9e-40 Score=364.51 Aligned_cols=309 Identities=19% Similarity=0.282 Sum_probs=242.7
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCC--ce-eecHhhHhhhhcCCcchHHHHHHhhCCCCCCH
Q 003056 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDK--QR-FIGTAGAASSTMNPKNSISQIKRLIGRQFSDP 78 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~ 78 (852)
.+|||||||+||++++..++ ++.+ +||+|+|..+ .+ +||++|+.+..++|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~~---~~~~------~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------- 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG---IVVN------EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------- 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE---EEEE------EESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-------------
T ss_pred ceEEEEcCcCcEEEEECCCC---EEEe------eCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-------------
Confidence 58999999999999875333 2322 7999999865 34 6999998777666665421
Q ss_pred HHHHhhccCCceEeeCCCCceEEEEEEcCceeee-cHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHH
Q 003056 79 ELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVF-TPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVI 157 (852)
Q Consensus 79 ~v~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~ 157 (852)
..|+. +|.+ ..+ .++++++++|++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 -------~~p~~-----~g~i----------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 -------IRPMR-----DGVI----------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -------ECCEE-----TTEE----------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred -------EecCC-----CCee----------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 11211 2321 112 4677888888776542 1233 478999999999999999999
Q ss_pred HHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHH
Q 003056 158 DAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEV 237 (852)
Q Consensus 158 ~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~ 237 (852)
+|++.||++++++++||+|||++|+.... .+.++||||+||||||++++.... ++ ..++..+||++||+.
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-----~~~~~lVvDiGggttdvsv~~~~~----~~-~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE-----EPSGNMVVDIGGGTTEVAVISLGS----IV-TWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT-----SSSCEEEEEECSSCEEEEEEETTE----EE-EEEEESCSHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC-----CCceEEEEEeCCCeEEEEEEEcCC----EE-eeCCCCccChhHHHH
Confidence 99999999999999999999999986432 367899999999999999988753 22 234688999999999
Q ss_pred HHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCc------ccEEEe--cccCCcceEEEecHHHHHHHHHH
Q 003056 238 LFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPE------APLNIE--CLMEEKDVRGFIKRDEFEQISAP 309 (852)
Q Consensus 238 l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~------~~i~ie--~l~~~~d~~~~itr~efe~l~~~ 309 (852)
|++++.+++ ++++. ...||++|+.|+.... ..+.+. .+.++.++.+.|+|++|++++++
T Consensus 186 l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~ 252 (344)
T 1jce_A 186 IVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRS 252 (344)
T ss_dssp HHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHH
T ss_pred HHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHH
Confidence 999998764 33332 3789999999987643 234443 45567778899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCc-cEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhc
Q 003056 310 ILERVKRPLEKALAETGLS--VEDV-HMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (852)
Q Consensus 310 ~~~~i~~~i~~~l~~a~~~--~~~I-~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls 381 (852)
+++++..+|.++|+.++.. .+.+ +.|+|+||+|++|+|+++|++.|+.++....||+++||+||+++++.++
T Consensus 253 ~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 253 VVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999999987532 1234 6899999999999999999999998888888999999999999998655
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=8.1e-32 Score=274.29 Aligned_cols=210 Identities=19% Similarity=0.284 Sum_probs=187.7
Q ss_pred EEeeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCcccee
Q 003056 390 QVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKIST 464 (852)
Q Consensus 390 ~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~ 464 (852)
.+.|++|++|||++.++ .+.+||+||++||++++.+|++..| +.|.+ |+|++.+ .+|..||+
T Consensus 2 ~l~DV~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~dn~~Lg~ 68 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAADNKSLGQ 68 (219)
T ss_dssp CCCCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGGGSEEEEE
T ss_pred eEEEecCcEEEEEEeCC------------EEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEE-EEcCCcccccCCEEEE
Confidence 57899999999999876 7899999999999999999987654 77887 6777777 89999999
Q ss_pred EEEcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCccccccccc
Q 003056 465 YTIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDA 544 (852)
Q Consensus 465 ~~i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (852)
|.|.|+|+++.|.+.|+|+|.+|.||+|+|++. +
T Consensus 69 f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~-------------------------d--------------------- 102 (219)
T 4e81_A 69 FNLDGINPAPRGMPQIEVTFDIDADGILHVSAK-------------------------D--------------------- 102 (219)
T ss_dssp EEEECCCCCSTTCSCEEEEEEECTTCCEEEEEE-------------------------E---------------------
T ss_pred EEEeCCCCCCCCCceEEEEEEeCCCCCEeeeee-------------------------c---------------------
Confidence 999999999999999999999999999999986 1
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHH
Q 003056 545 KGTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETK 624 (852)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ 624 (852)
+.++++..++|... .+||.++|++|+++++++..+|+..+++.
T Consensus 103 -----------------------------------~~tg~~~~i~I~~~--~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~ 145 (219)
T 4e81_A 103 -----------------------------------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFEELV 145 (219)
T ss_dssp -----------------------------------TTTCCEEEEEECTT--CSCCHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred -----------------------------------cccCccceEeeecc--ccccHHHHHHHHHHHHHhhhccHHHHHHH
Confidence 22234556777654 37999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHh
Q 003056 625 DRKNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 700 (852)
Q Consensus 625 ~akN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e 700 (852)
++||.||+|||.+|+.|.+ +..++++++|+.|...|.++++||+++ ++++|.+++++|+..++||..|++.
T Consensus 146 e~kn~le~~i~~~~~~l~~-~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 146 QTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHH-hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999975 888999999999999999999999976 6899999999999999999999876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.97 E-value=2.9e-30 Score=265.63 Aligned_cols=209 Identities=15% Similarity=0.259 Sum_probs=182.5
Q ss_pred eeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCccceeEE
Q 003056 392 NESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTYT 466 (852)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~~~ 466 (852)
.|++||+|||++.++ .+.+||++|++||++++.+|++..+ +.|.++| |++.+ .+|..||+|.
T Consensus 1 ~Dv~p~slGie~~~g------------~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~q-Ge~~~~~~n~~Lg~f~ 67 (227)
T 1u00_A 1 MDVIPLSLGLETMGG------------LVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQ-GERELVQDCRSLARFA 67 (227)
T ss_dssp CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEE-CSSSBGGGSEEEEEEE
T ss_pred CCcccceEEEEEeCC------------EEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEe-cCCccCCCCCEEEEEE
Confidence 489999999999876 6889999999999999999987553 8888865 55555 8899999999
Q ss_pred EcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCccccccccccC
Q 003056 467 IGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 546 (852)
Q Consensus 467 i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (852)
|.|+++.+.|.++|+|+|.+|.||+|+|++. +
T Consensus 68 l~gi~~~p~G~~~I~Vtf~iD~nGiL~V~a~-------------------------d----------------------- 99 (227)
T 1u00_A 68 LRGIPALPAGGAHIRVTFQVDADGLLSVTAM-------------------------E----------------------- 99 (227)
T ss_dssp ECCCCCCSTTCSCEEEEEEECTTCCEEEEEE-------------------------E-----------------------
T ss_pred EeCCCCCCCCceEEEEEEEECCCCcEEEEee-------------------------c-----------------------
Confidence 9999999888889999999999999999885 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHHH
Q 003056 547 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 626 (852)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 626 (852)
+.+.++..++|... .+||.++|+++++++.+|..+|+.++++.++
T Consensus 100 ---------------------------------~~tg~~~~i~i~~~--~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~ 144 (227)
T 1u00_A 100 ---------------------------------KSTGVEASIQVKPS--YGLTDSEIASMIKDSMSYAEQDVKARMLAEQ 144 (227)
T ss_dssp ---------------------------------TTTCCEEEEEECCC--SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ---------------------------------ccccccceEEEEec--cCCCHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 00112345666654 3699999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHhh
Q 003056 627 KNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEF 701 (852)
Q Consensus 627 kN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e~ 701 (852)
||.||+|||++|++|.+ +..++++++|+.|...|+++++|||++ ++++|.+++++|+++++||..|++..
T Consensus 145 kn~le~~i~~~~~~l~~-~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i~~r~~~~ 214 (227)
T 1u00_A 145 KVEAARVLESLHGALAA-DAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDFAARRMDQ 214 (227)
T ss_dssp HHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999975 788999999999999999999999954 48999999999999999999987643
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=1.1e-27 Score=263.94 Aligned_cols=227 Identities=17% Similarity=0.157 Sum_probs=169.1
Q ss_pred ecHHHHHHHHHHHHHHHHHHhcCCCcCcEE--EEEcCCCCHHHHHHHHHHHHHc--------C------CcceeeechhH
Q 003056 112 FTPTQVLGMLLSNLKAIAESNLNAAVVDCC--IGIPVYFTDLQRRAVIDAATIA--------G------LHPLRLFHETT 175 (852)
Q Consensus 112 ~~~eel~a~~L~~l~~~a~~~~~~~~~~~V--itVP~~f~~~qR~al~~Aa~~A--------G------l~~~~li~Ep~ 175 (852)
+..+....+++..|+..++...+.+ .++| |+||++|+..||+++++++..+ | +..+++++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3446677788887776542232333 5699 9999999999999999997765 4 35588999999
Q ss_pred HHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcc--c
Q 003056 176 ATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKI--D 253 (852)
Q Consensus 176 AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~--~ 253 (852)
|||++| +...... ....+++|||+||||||++++++.++. .+....++..+||.+|++.|++++.++ |++ +
T Consensus 174 AAa~~~-l~~~~~~-~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~----~g~~~~ 246 (346)
T 2fsj_A 174 GAALYL-LNQGIIE-QQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKE----TGFVVP 246 (346)
T ss_dssp HHHHHH-HHHTSSC-CCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHH----HCCCCC
T ss_pred HHHHHh-hcccccc-ccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHH----hCCCcC
Confidence 999998 3332111 124679999999999999999987776 455445678899999999999877654 454 3
Q ss_pred ccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCc
Q 003056 254 VSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEF-EQISAPILERVKRPLEKALAETGLSVEDV 332 (852)
Q Consensus 254 ~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~ef-e~l~~~~~~~i~~~i~~~l~~a~~~~~~I 332 (852)
+.. ..++ ....+.+ .+. .++++++ +++++++++++...|+++|+.+ .+++
T Consensus 247 i~~---------~~~e---------~~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FDL---------AQEA---------LSHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HHH---------HHHH---------TTSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CCH---------HHHh---------cCCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 321 1222 1112333 222 2559999 9999999999999999999876 4578
Q ss_pred cEEEEeCCCCChHHHHHHHHhhcCCCCcc---cCCchhHHHhhHHHhhh
Q 003056 333 HMVEVVGSSSRVPAIIKILTEFFGKEPRR---TMNASECVARGCALQCA 378 (852)
Q Consensus 333 ~~ViLvGG~sriP~v~~~l~~~fg~~v~~---~~n~deava~GAa~~aa 378 (852)
+.|+|+||++++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999973 333 66999999999997654
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=4.9e-27 Score=262.79 Aligned_cols=317 Identities=16% Similarity=0.190 Sum_probs=206.6
Q ss_pred EEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHHHH
Q 003056 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (852)
Q Consensus 3 viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v~~ 82 (852)
++|||+||++++++++.++.+.+ +..|.+.+|+.+. ......++..+...+|+++++.-
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~~------- 73 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEAR------- 73 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHHT-------
T ss_pred eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHcC-------
Confidence 78999999999999887666444 3334455555322 11234567788889999887510
Q ss_pred hhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHH----------
Q 003056 83 DLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQ---------- 152 (852)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~q---------- 152 (852)
.+ ...-.+..+.+.+..+... ...++.+++-.. ++..++.+++.++.++||.+|. .+.+
T Consensus 74 -~~-~~~v~~~i~~~~~~~~~~~---~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~ 142 (377)
T 2ych_A 74 -TR-KRYVVTALSNLAVILRPIQ---VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQ 142 (377)
T ss_dssp -CC-CCEEEEEECGGGCEEEEEE---EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEE
T ss_pred -CC-cceEEEEecCCcEEEEEEE---CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeE
Confidence 00 0101112222222222111 135778887653 3446777889999999999983 3332
Q ss_pred ----------HHHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEE
Q 003056 153 ----------RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILG 222 (852)
Q Consensus 153 ----------R~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~ 222 (852)
.+++++|++.|||++..++.||+|+|++|+....+ ..+..++|||+||||||+++++. |.+ .
T Consensus 143 v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~---~~~~~~~vvDiGggttdi~i~~~--g~~--~- 214 (377)
T 2ych_A 143 VMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE---EPDRVFLVLDIGAESTSLVLLRG--DKP--L- 214 (377)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT---STTCEEEEEEECSSCEEEEEEET--TEE--E-
T ss_pred EEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc---ccCCeEEEEEECCCcEEEEEEEC--CEE--E-
Confidence 38899999999999999999999999998764321 13567999999999999999863 433 2
Q ss_pred EeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHH
Q 003056 223 HSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDE 302 (852)
Q Consensus 223 ~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~e 302 (852)
..++..+||.+||+.|++. ++++ +..||++|+.++............++-.+....++|++
T Consensus 215 ~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~ 275 (377)
T 2ych_A 215 AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGR 275 (377)
T ss_dssp EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------C
T ss_pred EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHH
Confidence 2346789999999999873 3332 36899999998754322111110111112345789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHc--CCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCccc------------------
Q 003056 303 FEQISAPILERVKRPLEKALAET--GLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRT------------------ 362 (852)
Q Consensus 303 fe~l~~~~~~~i~~~i~~~l~~a--~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~------------------ 362 (852)
|+++++++++++...|++.|+.. +.....++.|+|+||++++|.+++.|++.||.++...
T Consensus 276 ~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l 355 (377)
T 2ych_A 276 IYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQL 355 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHH
Confidence 99999999999999999999963 5666789999999999999999999999998654322
Q ss_pred --CCchhHHHhhHHHhhh
Q 003056 363 --MNASECVARGCALQCA 378 (852)
Q Consensus 363 --~n~deava~GAa~~aa 378 (852)
.+|..++|+|+|+++.
T Consensus 356 ~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 356 QEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHHHHcCC
Confidence 1344567788887653
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.93 E-value=4.6e-25 Score=235.31 Aligned_cols=202 Identities=24% Similarity=0.321 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHHHHHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCce
Q 003056 116 QVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN 195 (852)
Q Consensus 116 el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~ 195 (852)
+....+|+++++.++...+..+..+|+++|++|+..+|+.+..+++.+|+++..++.||+|++++|+. ..
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~----------~~ 140 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGI----------ND 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTC----------SS
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcC----------CC
Confidence 45678888888888888888888999999999999999999999999999999999999999998864 13
Q ss_pred EEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhc
Q 003056 196 VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVL 275 (852)
Q Consensus 196 vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~L 275 (852)
.+|+|+|||||+++++. .+.+ + ......+||.+||+.|.+++. ++ ...|+++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999976 3333 2 345789999999999998763 11 26788899887
Q ss_pred CCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc
Q 003056 276 SANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF 355 (852)
Q Consensus 276 S~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f 355 (852)
+ ++.+|++++.++++++...+.+.|+..+ +++.|+|+||++++|+++++|++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 5 5899999999999999999999998764 4789999999999999999999999
Q ss_pred CCCCcccCCchhHHHhhHHHhh
Q 003056 356 GKEPRRTMNASECVARGCALQC 377 (852)
Q Consensus 356 g~~v~~~~n~deava~GAa~~a 377 (852)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999889999999999999875
No 16
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.93 E-value=4.5e-25 Score=217.03 Aligned_cols=159 Identities=20% Similarity=0.322 Sum_probs=136.2
Q ss_pred cceEEeeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCcc
Q 003056 387 REFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAK 461 (852)
Q Consensus 387 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ 461 (852)
..+.+.|++||+|||+|.++ .+.+||+||++||++++.+|.+..| +.|.+ |+|++.+ .+|..
T Consensus 18 ~~f~l~DV~P~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~V-yqGE~~~~~dn~~ 84 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGG------------VFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKV-CQGEREMAGDNKL 84 (182)
T ss_dssp ------CBCSSCEEEECTTS------------BEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGGGSEE
T ss_pred CCEEEEEecCCEEEEEEeCC------------EEEEEEeCCCccCEEEEEEEEECCCCccEEEEEE-EEcCccccccCce
Confidence 46789999999999999876 6889999999999999999988665 78888 7787777 89999
Q ss_pred ceeEEEcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCcccccc
Q 003056 462 ISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNM 541 (852)
Q Consensus 462 ig~~~i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (852)
||+|.|.|+|+++.|.++|+|+|.+|.||+|+|++. |
T Consensus 85 LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~-------------------------d------------------ 121 (182)
T 3n8e_A 85 LGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAK-------------------------D------------------ 121 (182)
T ss_dssp EEEEEECCCCCCCTTCSCEEEEEEECTTCCEEEEEE-------------------------E------------------
T ss_pred EEEEEEcCCCCCCCCCeeEEEEEEEecCCEEEEEEE-------------------------E------------------
Confidence 999999999999989999999999999999999886 1
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHH
Q 003056 542 QDAKGTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVME 621 (852)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~ 621 (852)
+.+.++..++|... ++||.++|++|++++++++.+|+.++
T Consensus 122 --------------------------------------~~tg~~~~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~ 161 (182)
T 3n8e_A 122 --------------------------------------KGTGREQQIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKK 161 (182)
T ss_dssp --------------------------------------TTTCCEEEEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHH
T ss_pred --------------------------------------cCCCCEeeEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHH
Confidence 22234556777665 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHh
Q 003056 622 ETKDRKNAVEAYVYDMRNKL 641 (852)
Q Consensus 622 ~~~~akN~LEs~iy~~r~~L 641 (852)
++.++||.||+|||++|++|
T Consensus 162 ~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 162 ERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp HHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999876
No 17
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.92 E-value=1.7e-24 Score=243.63 Aligned_cols=198 Identities=15% Similarity=0.056 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCccc
Q 003056 152 QRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGG 231 (852)
Q Consensus 152 qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG 231 (852)
..+.+.+|++.|||++..++.||+|||++|..... ....+++||+||||||+++++ +|.+.. .++..+||
T Consensus 169 ~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-----~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG 238 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-----KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGM 238 (419)
T ss_dssp HHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-----HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCH
T ss_pred HHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-----ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHH
Confidence 45788999999999999999999999998854321 246799999999999999976 454432 23679999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCC-----CcccEEEecccCCcceEEEecHHHHHHH
Q 003056 232 RDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-----PEAPLNIECLMEEKDVRGFIKRDEFEQI 306 (852)
Q Consensus 232 ~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~-----~~~~i~ie~l~~~~d~~~~itr~efe~l 306 (852)
++||+.|+..+. + ...+||++|+.++.. ....+.++.+. ......++|++|.++
T Consensus 239 ~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~i 297 (419)
T 4a2a_A 239 KHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSVI 297 (419)
T ss_dssp HHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHHH
Confidence 999999987532 2 137899999998642 34467777653 246678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCC------CCCCccEEEEeCCCCChHHHHHHHHhhcCCCCccc-----------------C
Q 003056 307 SAPILERVKRPLEKALAETGL------SVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRT-----------------M 363 (852)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~a~~------~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~-----------------~ 363 (852)
+++.++++...|.+.|+.+++ ....++.|+|+||+|++|.|++++++.||.++... .
T Consensus 298 i~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 298 IHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcccccC
Confidence 999999999999999999997 34568999999999999999999999998654321 3
Q ss_pred CchhHHHhhHHHhhhhh
Q 003056 364 NASECVARGCALQCAIL 380 (852)
Q Consensus 364 n~deava~GAa~~aa~l 380 (852)
+|..+++.|.+++++..
T Consensus 378 ~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CGGGHHHHHTTCC----
T ss_pred CchHHHHHHHHHHHhhc
Confidence 78999999999887643
No 18
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.91 E-value=1.7e-24 Score=245.48 Aligned_cols=227 Identities=12% Similarity=0.053 Sum_probs=164.5
Q ss_pred cCcEEEEEcCCCCHHHHHHHHHHH-HHcCCcceeeechhHHHHHH-hhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee
Q 003056 137 VVDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALA-YGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK 214 (852)
Q Consensus 137 ~~~~VitVP~~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~-y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~ 214 (852)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+|||++ |.. ..++.... +.||||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~~~~-~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGERTL-TGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCSCCC-CEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCCCCC-eEEEEEcCCCceEEEEeE--
Confidence 457999999999999999999999 99999999999999999876 421 11221123 679999999999999985
Q ss_pred CCeEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCC---------------
Q 003056 215 KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANP--------------- 279 (852)
Q Consensus 215 ~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~--------------- 279 (852)
.|.. +.....+..+||++||+.|.++|..++ +...... -...++++|+.++...
T Consensus 182 ~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGYV-IGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCEE-cccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 3432 322224578999999999999987643 1222111 1256777787775432
Q ss_pred --cccEEEecccCCcceEEEecHHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCCCCccEEEEeCCCCChHH
Q 003056 280 --EAPLNIECLMEEKDVRGFIKRDEF---EQISAPIL------ERVKRPLEKALAETG--LSVEDVHMVEVVGSSSRVPA 346 (852)
Q Consensus 280 --~~~i~ie~l~~~~d~~~~itr~ef---e~l~~~~~------~~i~~~i~~~l~~a~--~~~~~I~~ViLvGG~sriP~ 346 (852)
...+.++....+....+.|+++.| |.+++|.+ ..+..+|.++|..+. +....++.|+|+||+|++|.
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 123555554445566889999999 55555432 568889999998865 33455789999999999999
Q ss_pred HHHHHHhhcCC------------------------CCcccCCchhHHHhhHHHhhhh
Q 003056 347 IIKILTEFFGK------------------------EPRRTMNASECVARGCALQCAI 379 (852)
Q Consensus 347 v~~~l~~~fg~------------------------~v~~~~n~deava~GAa~~aa~ 379 (852)
++++|++.|+. .+..+.++..++.+||+++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99999876641 1223446779999999999863
No 19
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.90 E-value=1.9e-24 Score=241.32 Aligned_cols=213 Identities=11% Similarity=0.109 Sum_probs=151.8
Q ss_pred CcEEEEEcCCCCHHHHHHHHHHH-HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 003056 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (852)
Q Consensus 138 ~~~VitVP~~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~ 216 (852)
..+|||+|++++..+|+++.+++ +.+|++.+.+++||+|||++|+. .+.||||+|+|||+++.+ ..|
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~----------~~~lVvDiG~gtt~v~~v--~~G 168 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVTHNVPI--YEG 168 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC----------SSEEEEEECSSCEEEEEE--ETT
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC----------CeEEEEEcCCCceEEeEe--ECC
Confidence 45999999999999999888765 88899999999999999998863 368999999999998775 344
Q ss_pred eEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCC----------------CCc
Q 003056 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSA----------------NPE 280 (852)
Q Consensus 217 ~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~----------------~~~ 280 (852)
. .+........+||++||+.|.++|..+. +....... ...++++|+.+.. ...
T Consensus 169 ~-~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~ 237 (375)
T 2fxu_A 169 Y-ALPHAIMRLDLAGRDLTDYLMKILTERG---YSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLE 237 (375)
T ss_dssp E-ECGGGCEEESCCHHHHHHHHHHHHHHHT---CCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred E-EeccceEEeccCHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccC
Confidence 3 2322233578999999999999987651 22211111 1334455554422 222
Q ss_pred ccEEEecccCCcceEEEecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--CCCCccEEEEeCCCCChHHHHHH
Q 003056 281 APLNIECLMEEKDVRGFIKRDEF---EQISAPI-----LERVKRPLEKALAETGL--SVEDVHMVEVVGSSSRVPAIIKI 350 (852)
Q Consensus 281 ~~i~ie~l~~~~d~~~~itr~ef---e~l~~~~-----~~~i~~~i~~~l~~a~~--~~~~I~~ViLvGG~sriP~v~~~ 350 (852)
..+.++ ++ ..+.|+++.| |.+++|. ...+..+|.++|..+.. ....++.|+|+||+|++|.++++
T Consensus 238 ~~~~lp---dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~r 312 (375)
T 2fxu_A 238 KSYELP---DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADR 312 (375)
T ss_dssp EEEECT---TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHH
Confidence 223332 22 2467888877 3344442 24577888888886532 23345789999999999999999
Q ss_pred HHhhcC--------CCCcccCCchhHHHhhHHHhhh
Q 003056 351 LTEFFG--------KEPRRTMNASECVARGCALQCA 378 (852)
Q Consensus 351 l~~~fg--------~~v~~~~n~deava~GAa~~aa 378 (852)
|.+.++ .++....||..++++||+++|.
T Consensus 313 l~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 313 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 999875 2344567899999999999987
No 20
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.87 E-value=2.3e-22 Score=219.42 Aligned_cols=227 Identities=12% Similarity=0.089 Sum_probs=149.0
Q ss_pred eeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCC-CCHH--HH--HHHHHH------------HHHcCCcceeeec
Q 003056 110 RVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVY-FTDL--QR--RAVIDA------------ATIAGLHPLRLFH 172 (852)
Q Consensus 110 ~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~-f~~~--qR--~al~~A------------a~~AGl~~~~li~ 172 (852)
..+++..+++.+ ..|+. +. ..+.+ .++|+++|.. |... || .++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 357777777654 44443 21 12223 3699999987 6541 22 222221 2344567789999
Q ss_pred hhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcc
Q 003056 173 ETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKI 252 (852)
Q Consensus 173 Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~ 252 (852)
||.||+++|+.... ....++|+|+||||||+++++ ++.+.+..+.++..+||.+||+.|++++.++ ++
T Consensus 148 e~~aa~~~~~~~~~-----~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~ 215 (320)
T 2zgy_A 148 ESIPAGYEVLQELD-----ELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RT 215 (320)
T ss_dssp SSHHHHHHHHHHSC-----TTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SB
T ss_pred CcHHHHHhhhcccc-----CCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CC
Confidence 99999998863211 357899999999999999987 4555566666788999999999999987641 33
Q ss_pred cccCCHHHHHHHHHHHHHh-hhhcCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 003056 253 DVSQNARASLRLRVACEKL-KKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVED 331 (852)
Q Consensus 253 ~~~~~~~~~~rL~~~aek~-K~~LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~ 331 (852)
++.. ..++++ |..- ... ..... .+. .-.++++.+++.+.++.+...|.+.+++. .+
T Consensus 216 ~i~~---------~~ae~~lk~~~---~~~--~~~~~---i~~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~ 272 (320)
T 2zgy_A 216 KGSS---------YLADDIIIHRK---DNN--YLKQR---IND--ENKISIVTEAMNEALRKLEQRVLNTLNEF----SG 272 (320)
T ss_dssp GGGH---------HHHHHHHHTTT---CHH--HHHHH---SSS--SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CC
T ss_pred CCCH---------HHHHHHHHHhh---hhh--cccce---ecC--chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cC
Confidence 3321 234444 3220 000 00000 000 11345566666666666666666666542 57
Q ss_pred ccEEEEeCCCCChHHHHHHHHhhcCC---CCcccCCchhHHHhhHHHhh
Q 003056 332 VHMVEVVGSSSRVPAIIKILTEFFGK---EPRRTMNASECVARGCALQC 377 (852)
Q Consensus 332 I~~ViLvGG~sriP~v~~~l~~~fg~---~v~~~~n~deava~GAa~~a 377 (852)
++.|+|+||++++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 8999999999998 99999999986 47778899999999999875
No 21
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.86 E-value=1.7e-21 Score=186.80 Aligned_cols=146 Identities=16% Similarity=0.320 Sum_probs=127.6
Q ss_pred EeeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCccceeE
Q 003056 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (852)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~~ 465 (852)
+.|++||+||++|.++ .+.+||+||++||++++.+|++..| +.|.+ |+|++.+ .+|..||+|
T Consensus 2 ~~Dv~p~slGi~~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~V-yqGe~~~~~dn~~LG~f 68 (152)
T 3h0x_A 2 NADVNALTLGIETTGG------------VMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKV-YEGERAMSKDNNLLGKF 68 (152)
T ss_dssp -CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGGGSEEEEEE
T ss_pred ccceeccEEEEEEcCC------------EEEEEEECcCccCEEEEEEEEeCCCCcceeeeeE-EEcCccccccCcEEEEE
Confidence 5799999999999876 6899999999999999999988665 67777 7787777 899999999
Q ss_pred EEcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCcccccccccc
Q 003056 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (852)
Q Consensus 466 ~i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (852)
.|.|+++++.|.++|+|+|.+|.||+|+|++. |
T Consensus 69 ~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~-------------------------d---------------------- 101 (152)
T 3h0x_A 69 ELTGIPPAPRGVPQIEVTFALDANGILKVSAT-------------------------D---------------------- 101 (152)
T ss_dssp EECCCCCCCTTCSCEEEEEEECTTSEEEEEEE-------------------------E----------------------
T ss_pred EEeCCCCCCCCCceEEEEEEEcCCCEEEEEEE-------------------------E----------------------
Confidence 99999999888899999999999999999996 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHH
Q 003056 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (852)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ 625 (852)
+.++++..++|.... +.||.++|++|++++++|+.+|+..+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~I~~~~-~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~ 146 (152)
T 3h0x_A 102 ----------------------------------KGTGKSESITITNDK-GRLTQEEIDRMVEEAEKFASEDASIKAKVE 146 (152)
T ss_dssp ----------------------------------TTTCCEEEEEEECCT-TCCCHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----------------------------------cCCCcEeEEEEecCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 222345677777654 479999999999999999999999999999
Q ss_pred HHHHHH
Q 003056 626 RKNAVE 631 (852)
Q Consensus 626 akN~LE 631 (852)
+||.||
T Consensus 147 ~~n~le 152 (152)
T 3h0x_A 147 SRNKLE 152 (152)
T ss_dssp CSCCCC
T ss_pred HHhhcC
Confidence 999986
No 22
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.85 E-value=2.4e-21 Score=185.39 Aligned_cols=146 Identities=18% Similarity=0.353 Sum_probs=123.3
Q ss_pred EeeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCccceeE
Q 003056 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (852)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~~ 465 (852)
+.|++||+||++|.++ .+.+||+||++||++++.+|++..| +.|.+ |+|++.+ .+|..||+|
T Consensus 2 ~~Dv~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~dn~~LG~f 68 (152)
T 3dob_A 2 NADVAPLSLGIETAGG------------VMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQV-YEGERAMTRDNHRLGTF 68 (152)
T ss_dssp --CBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGGGSEEEEEE
T ss_pred ceeeecceEEEEEcCC------------EEEEEEECcCccCEEEEEEEEECCCCceEEEEEE-EEcCccccccCceeEEE
Confidence 6799999999999876 6899999999999999999998665 56777 7788777 899999999
Q ss_pred EEcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCcccccccccc
Q 003056 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (852)
Q Consensus 466 ~i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (852)
.|.|+++++.|.+.|+|+|.+|.||+|+|++. |
T Consensus 69 ~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~-------------------------d---------------------- 101 (152)
T 3dob_A 69 ELSGIPPAPRGVPQIEVTFNIDANGILNVSAE-------------------------D---------------------- 101 (152)
T ss_dssp EEECCCCCCTTCCCEEEEEEECTTCCEEEEEE-------------------------E----------------------
T ss_pred EEeCCCCCCCCCceEEEEEEeCCCCeEEEEEE-------------------------E----------------------
Confidence 99999999888899999999999999999996 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHH
Q 003056 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (852)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ 625 (852)
+.++++..+.|.... +.||.++|++|++++++++.+|++.+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~I~~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~ 146 (152)
T 3dob_A 102 ----------------------------------KSTGKSNRITIQNEK-GRLTQSDIDRMVHEAKQFEKEDGEQRERVQ 146 (152)
T ss_dssp ----------------------------------TTTCCEEEEEECCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCC
T ss_pred ----------------------------------cCCCCEEEEEEEcCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 222345567776554 369999999999999999999999999999
Q ss_pred HHHHHH
Q 003056 626 RKNAVE 631 (852)
Q Consensus 626 akN~LE 631 (852)
+||.||
T Consensus 147 ~~n~le 152 (152)
T 3dob_A 147 ARNQLE 152 (152)
T ss_dssp CCSEEC
T ss_pred HHhhcC
Confidence 999875
No 23
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.85 E-value=1.6e-21 Score=186.31 Aligned_cols=145 Identities=17% Similarity=0.315 Sum_probs=125.9
Q ss_pred EeeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCccceeE
Q 003056 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (852)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~~ 465 (852)
+.|++||+||++|.++ .+.+||+||++||++++.+|++..| +.|.+ |+|++.+ .+|..||+|
T Consensus 2 ~~DV~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~V-yqGe~~~~~dn~~LG~f 68 (151)
T 3dqg_A 2 NADVTPLSLGIETLGG------------IMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKV-FQGEREMATSNKLLGQF 68 (151)
T ss_dssp --CBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGGGSEEEEEE
T ss_pred cceeeeeEEEEEEcCC------------EEEEEEECcCccCEEEEEEEEECCCCcceEEEEE-EEcCCcccccCcEEEEE
Confidence 6799999999999876 6899999999999999999988664 77777 7788777 899999999
Q ss_pred EEcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCcccccccccc
Q 003056 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (852)
Q Consensus 466 ~i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (852)
.|.|+++++.|.++|+|+|.+|.||+|+|++. |
T Consensus 69 ~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~-------------------------d---------------------- 101 (151)
T 3dqg_A 69 SLVGIPPAPRGVPQVEVTFDIDANGIVNVSAR-------------------------D---------------------- 101 (151)
T ss_dssp EEECCCCCCTTCSCEEEEEEECTTSEEEEEEE-------------------------E----------------------
T ss_pred EEeCCCCCCCCCcEEEEEEEeccCcEEEEEEE-------------------------E----------------------
Confidence 99999999888899999999999999999986 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHH
Q 003056 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (852)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ 625 (852)
+.++++..+.|... ++||.++|++|++++++++.+|+..+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~I~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~ 145 (151)
T 3dqg_A 102 ----------------------------------RGTGKEQQIVIQSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVE 145 (151)
T ss_dssp ----------------------------------TTTCCEEEEEEECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred ----------------------------------ccCCCEeEEEEecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 22234557777755 489999999999999999999999999999
Q ss_pred HHHHHH
Q 003056 626 RKNAVE 631 (852)
Q Consensus 626 akN~LE 631 (852)
+||.||
T Consensus 146 ~~n~~e 151 (151)
T 3dqg_A 146 VINQAE 151 (151)
T ss_dssp CBCCCC
T ss_pred HHhhcC
Confidence 999875
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.81 E-value=7.6e-20 Score=176.31 Aligned_cols=146 Identities=14% Similarity=0.315 Sum_probs=123.7
Q ss_pred EeeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCccceeE
Q 003056 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (852)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ig~~ 465 (852)
+.|++||+|||++.++ .+.+||++|+++|++++.+|.+..+ +.|.++| |++.+ .+|..||+|
T Consensus 2 v~Dv~p~slGi~~~~g------------~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~q-Ge~~~~~~n~~lg~~ 68 (152)
T 2op6_A 2 NADVNPLTLGIETVGG------------VMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYE-GERPMVMDNHKLGNF 68 (152)
T ss_dssp -CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEE-SSCSBGGGSEEEEEE
T ss_pred ceEeecccEEEEEeCC------------EEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEE-eCCccCccCCEeEEE
Confidence 5799999999999876 7889999999999999999987655 8888865 45555 789999999
Q ss_pred EEcCCCCCCCCcceEEEEEEEcCCccEEEEEeeeeeeeeecccccCCcchhhccccCCCCCCCCCCCCCCcccccccccc
Q 003056 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (852)
Q Consensus 466 ~i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (852)
.|.|+++.+.|.++|+|+|.+|.||+|+|++. +
T Consensus 69 ~l~gipp~p~G~~~I~V~f~id~nGiL~V~a~-------------------------d---------------------- 101 (152)
T 2op6_A 69 DVTGIPPAPRGVPQIEVTFEIDVNGILHVSAE-------------------------D---------------------- 101 (152)
T ss_dssp EECCCCCCCTTCSCEEEEEEECTTSCEEEEEE-------------------------E----------------------
T ss_pred EEECCCCCCCCCceEEEEEEECCCcEEEEEEE-------------------------E----------------------
Confidence 99999998888889999999999999999985 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHhhccchhHHHHHH
Q 003056 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (852)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ 625 (852)
+.+.++..++|.... ++||.++|+++++++.+|..+|+..+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~i~~~~-~~ls~eei~~~~~~~~~~~~~d~~~~~~~~ 146 (152)
T 2op6_A 102 ----------------------------------KGTGNKNKLTITNDH-NRLSPEDIERMINDADKFAADDQAQKEKVE 146 (152)
T ss_dssp ----------------------------------TTTCCEEEEEECSSS-SCCCHHHHHHHHHHHHHTHHHHHHHHHHSC
T ss_pred ----------------------------------ecCCcEEEEEeeccc-cCCCHHHHHHHHHHHHHhHhccHHHHHHHH
Confidence 011123456665543 479999999999999999999999999999
Q ss_pred HHHHHH
Q 003056 626 RKNAVE 631 (852)
Q Consensus 626 akN~LE 631 (852)
+||.||
T Consensus 147 ~kn~~e 152 (152)
T 2op6_A 147 SRNELE 152 (152)
T ss_dssp CCSEEC
T ss_pred HHhhcC
Confidence 999876
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.77 E-value=6.8e-18 Score=180.12 Aligned_cols=187 Identities=17% Similarity=0.119 Sum_probs=126.2
Q ss_pred HcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHH
Q 003056 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (852)
Q Consensus 162 ~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~ 241 (852)
+++..++..|+|++|.|+++.+.. +....|+|+|||+++++++. .++.+.+....+++..||.+|+..++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 367778899999999998876543 23457899999999999884 5678888888889999999999999988
Q ss_pred HHHHHHhhhcccccCCHHHHHHHHHHHHHhhhh--cCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHH
Q 003056 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKV--LSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLE 319 (852)
Q Consensus 242 l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~--LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~ 319 (852)
|.-.|.....+ +..++.. ++..... + ... + -....-.....++++..++..+...+.
T Consensus 140 l~~~~~~~~~~---------------~~~a~~~~~i~~~~~~-f-~~s---~-~~~~~~~~~~~~di~a~~~~~v~~~l~ 198 (276)
T 4ehu_A 140 IEVDVSELGSI---------------SMNSQNEVSISSTCTV-F-AES---E-VISHLSENAKIEDIVAGIHTSVAKRVS 198 (276)
T ss_dssp HTCCGGGHHHH---------------HTTCSSCCCCCCCSHH-H-HHH---H-HHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hccChhhhHHH---------------HhcCCCCCCcCCccch-h-hhh---H-HHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 75433221111 1111111 1110000 0 000 0 000000011134566666666666555
Q ss_pred HHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhc
Q 003056 320 KALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (852)
Q Consensus 320 ~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls 381 (852)
....+. ..++.|+|+||.+++|.|++.|++.||.++..+.||++++|+|||++|....
T Consensus 199 ~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 199 SLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 554443 3567899999999999999999999999999999999999999999986543
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.74 E-value=2.9e-19 Score=200.39 Aligned_cols=213 Identities=15% Similarity=0.168 Sum_probs=89.4
Q ss_pred CcEEEEEcCCCCHHHHHHHHHHH-HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 003056 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (852)
Q Consensus 138 ~~~VitVP~~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~ 216 (852)
..++||+|++++..+|+++.+++ +.+|++.+.++++|+|||++++. .+.+|+|+|+|+|+++.+. .|
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~----------~~~lVVDiG~g~T~v~pv~--~G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL----------LTGVVVDSGDGVTHICPVY--EG 172 (394)
T ss_dssp -----------------------------------------------------------CCEEEECSSCEEEECEE--TT
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC----------ceEEEEEcCCCceEeeeeE--CC
Confidence 35999999999999999988865 88899999999999999988864 3569999999999998763 33
Q ss_pred eEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCC----------------c
Q 003056 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANP----------------E 280 (852)
Q Consensus 217 ~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~----------------~ 280 (852)
.+ +........+||+++|+.|.++|..+ .+.+...... ..++.+|+.+..-. .
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 32 21111245799999999999998753 1222211122 34555555553221 1
Q ss_pred ccEEEecccCCcceEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--CCCccEEEEeCCCCChHHHHHH
Q 003056 281 APLNIECLMEEKDVRGFIKRDEFE---QISAPI-----LERVKRPLEKALAETGLS--VEDVHMVEVVGSSSRVPAIIKI 350 (852)
Q Consensus 281 ~~i~ie~l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~a~~~--~~~I~~ViLvGG~sriP~v~~~ 350 (852)
..+.+ .++. .+.|+++.|. -+++|- ...+...|.++|..+... ..-++.|+|+||+|++|.+.++
T Consensus 242 ~~~~l---pdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~r 316 (394)
T 1k8k_B 242 ESYTL---PDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSR 316 (394)
T ss_dssp EEEEC---TTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHH
T ss_pred eEEEC---CCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHH
Confidence 11222 2222 4567777773 223331 234778888888887432 2235789999999999999999
Q ss_pred HHhhcCC-----------------CC--cccCCchhHHHhhHHHhhh
Q 003056 351 LTEFFGK-----------------EP--RRTMNASECVARGCALQCA 378 (852)
Q Consensus 351 l~~~fg~-----------------~v--~~~~n~deava~GAa~~aa 378 (852)
|.+.++. ++ ..+.++..++.+|++++|.
T Consensus 317 l~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 317 LERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 9887742 22 2245677899999998886
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.68 E-value=2.1e-16 Score=173.82 Aligned_cols=207 Identities=14% Similarity=0.173 Sum_probs=139.9
Q ss_pred CcEEEEEcCCCCHHHH-HHHHHHHHHcCC------------cceeeechhHHHHHHhhhhcCCCCCC---CCceEEEEEe
Q 003056 138 VDCCIGIPVYFTDLQR-RAVIDAATIAGL------------HPLRLFHETTATALAYGIYKTDLPEN---DQLNVAFVDI 201 (852)
Q Consensus 138 ~~~VitVP~~f~~~qR-~al~~Aa~~AGl------------~~~~li~Ep~AAAl~y~~~~~~~~~~---~~~~vlv~D~ 201 (852)
..+|+.+|..+...+| +++++++...+- ..+.++.||.||+++|++... +.. .+..++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~--~~~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENG--KVFKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETT--EECHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccC--ccccccccCcEEEEEe
Confidence 3689999999998887 589998875543 467899999999999875431 101 2678999999
Q ss_pred CCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcc
Q 003056 202 GHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA 281 (852)
Q Consensus 202 GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~ 281 (852)
||||||++++ .++.+ +....+...+||..+++.|.+++.+++. +..+. . ...++.+. +
T Consensus 192 GggTtd~~v~--~~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-~------ 249 (355)
T 3js6_A 192 GSGTTIIDTY--QNMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-Y------ 249 (355)
T ss_dssp CSSCEEEEEE--ETTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC--------
T ss_pred CCCcEEEEEE--cCCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-c------
Confidence 9999999998 34332 1112224679999999999999887541 22222 1 11111111 0
Q ss_pred cEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHH--HHHHHHhhcCCCC
Q 003056 282 PLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPA--IIKILTEFFGKEP 359 (852)
Q Consensus 282 ~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~--v~~~l~~~fg~~v 359 (852)
.... . +..-...+ .+.+++.+++++++|...|++.+.. ++.++.|+|+||++.++. +++.|++.|+..
T Consensus 250 --~~~~-~-~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 250 --KQCK-L-NQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred --cccc-c-cccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 0000 0 00001112 3457777888888888888877753 466899999999999998 999999998542
Q ss_pred cccCCchhHHHhhHHHhhhhhc
Q 003056 360 RRTMNASECVARGCALQCAILS 381 (852)
Q Consensus 360 ~~~~n~deava~GAa~~aa~ls 381 (852)
.||..|+|+|+..++..+.
T Consensus 320 ---~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHH
Confidence 8999999999999987764
No 28
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.54 E-value=4.1e-15 Score=162.21 Aligned_cols=203 Identities=10% Similarity=0.124 Sum_probs=141.9
Q ss_pred CcEEEEEcCCCCH--HHHHHHHHHHHHc--------C------CcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEe
Q 003056 138 VDCCIGIPVYFTD--LQRRAVIDAATIA--------G------LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDI 201 (852)
Q Consensus 138 ~~~VitVP~~f~~--~qR~al~~Aa~~A--------G------l~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~ 201 (852)
..+|+++|..+.. .+|+.+++....- | +..+.++.|+.+|.+.+. .+. ....++|+|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~---~~~~v~vvDi 179 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENF---KNKNVAVIDF 179 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCC---TTCEEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhh---ccCCEEEEEe
Confidence 4789999988774 3677787776521 1 124678899988876541 111 4678999999
Q ss_pred CCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcc
Q 003056 202 GHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA 281 (852)
Q Consensus 202 GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~ 281 (852)
||||||++++. .+.+ +....+...+||.++++.|++++.+ .+|++.+.. ..++++|+. . ..
T Consensus 180 GggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~--g--~~ 240 (329)
T 4apw_A 180 GGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN--G--YM 240 (329)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS--C--SS
T ss_pred CCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc--C--Cc
Confidence 99999999987 4443 2222335679999999999987654 045555443 334445442 1 01
Q ss_pred cEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcc
Q 003056 282 PLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRR 361 (852)
Q Consensus 282 ~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~ 361 (852)
. .+.++. .+..+.+++.+++++++|...|++. +.+++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 241 ~-------~g~~~~-~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 241 K-------KGGEID-TESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp C-------EECTTC-CSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred c-------cCCcch-hHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 0 111221 3557788888888888877777765 3555668999999999998 569999999977778
Q ss_pred cCCchhHHHhhHHHhhhh
Q 003056 362 TMNASECVARGCALQCAI 379 (852)
Q Consensus 362 ~~n~deava~GAa~~aa~ 379 (852)
.-||..|+|+|+..++.+
T Consensus 307 ~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp CSSGGGHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhh
Confidence 889999999999987754
No 29
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.48 E-value=5.6e-14 Score=131.65 Aligned_cols=99 Identities=15% Similarity=0.293 Sum_probs=82.3
Q ss_pred ccceEEeeeccccEEEEecCCCCcccCcCCCCCceEEEeeCCCCCCceEEEEEeecCc----EEEEEEEeccccC-CCCc
Q 003056 386 VREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPA 460 (852)
Q Consensus 386 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~ 460 (852)
++++.+.|++|++|||++.++ .+.+||+||+++|++++.+|.+..+ +.|.++| +++.+ .+|.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~Vyq-Ge~~~~~~n~ 80 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQ-GERKRAADNK 80 (135)
T ss_dssp -------CCCSSCCCEEETTT------------EECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEE-CCSSSCSSSE
T ss_pred eCcEEEEEeecCcEEEEEECC------------EEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEE-eCCcccccCc
Confidence 468899999999999999875 6888999999999999999987543 8888855 55556 8899
Q ss_pred cceeEEEcCCCCCCCCcceEEEEEEEcCCccEEEEEe
Q 003056 461 KISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIESA 497 (852)
Q Consensus 461 ~ig~~~i~~i~~~~~~~~~i~v~~~~d~~Gil~v~~~ 497 (852)
.||+|.|.++++.+.|.++|+|+|++|.||+|+|++.
T Consensus 81 ~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~ 117 (135)
T 1q5l_A 81 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAK 117 (135)
T ss_dssp EEEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEE
T ss_pred EEEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEE
Confidence 9999999999999888889999999999999999986
No 30
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.35 E-value=1.2e-12 Score=147.08 Aligned_cols=222 Identities=13% Similarity=0.066 Sum_probs=139.1
Q ss_pred CcEEEEEcCCCCHHHHHHHHHHH-HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 003056 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (852)
Q Consensus 138 ~~~VitVP~~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~ 216 (852)
..+++|.|+..+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+.... .. ....+-||+|+|+|+|+++.| +.+
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~-~~-~~~~tglVVDiG~g~T~v~PV-~~G- 199 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK-VT-DRSLTGTVVDSGDGVTHIIPV-AEG- 199 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTT-TC-SCCCCEEEEEESSSCEEEEEE-ETT-
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccc-cc-CCCceEEEEECCCCceEEEEE-ECC-
Confidence 46999999999999999999887 78999999999999999987764321 00 013568999999999999997 332
Q ss_pred eEEEEEE-eCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcc-----------cEE
Q 003056 217 QLKILGH-SFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA-----------PLN 284 (852)
Q Consensus 217 ~~~vl~~-~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~-----------~i~ 284 (852)
. ++.. .....+||+++|..|.++|..+... ... ...++.+|+.+..-... ...
T Consensus 200 ~--~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~ 264 (427)
T 3dwl_A 200 Y--VIGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKEECCYVCPDIVKEFSRFDREPDR 264 (427)
T ss_dssp E--ECGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC----
T ss_pred E--EehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHHhcCcccCCHHHHHHHhhcCccc
Confidence 2 2211 1124799999999999887654321 010 13455555555322100 000
Q ss_pred Ee--cc--cCCcceEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCCC--CCccEEEEeCCCCChHHHHH
Q 003056 285 IE--CL--MEEKDVRGFIKRDEF---EQISAPI------LERVKRPLEKALAETGLSV--EDVHMVEVVGSSSRVPAIIK 349 (852)
Q Consensus 285 ie--~l--~~~~d~~~~itr~ef---e~l~~~~------~~~i~~~i~~~l~~a~~~~--~~I~~ViLvGG~sriP~v~~ 349 (852)
+. .+ .++..+.+.|..+.| |-+++|- ...|.++|.++|.++.... .-...|+|+||+|.+|.+.+
T Consensus 265 ~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~ 344 (427)
T 3dwl_A 265 YLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGN 344 (427)
T ss_dssp -CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTH
T ss_pred cceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHH
Confidence 10 01 223334566777665 2333331 2347778888887654221 11357999999999999999
Q ss_pred HHHhhcC----------------------CCCcccCCchhHHHhhHHHhhh
Q 003056 350 ILTEFFG----------------------KEPRRTMNASECVARGCALQCA 378 (852)
Q Consensus 350 ~l~~~fg----------------------~~v~~~~n~deava~GAa~~aa 378 (852)
+|.+.+. .++..+.++..++=+|++++|.
T Consensus 345 RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 345 RLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 8887541 1223345667899999999985
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.1e-11 Score=140.92 Aligned_cols=178 Identities=14% Similarity=0.093 Sum_probs=115.2
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCC----ceeecHhhHhhhhcCCcchHHHHHHhhCCCCCC
Q 003056 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDK----QRFIGTAGAASSTMNPKNSISQIKRLIGRQFSD 77 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~----~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~ 77 (852)
..|+||+||.++++++...+.+.+ .+||+|+.... ..+||+++.... +.+ +
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~--------l------ 78 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP---RKD--------Y------ 78 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC---CTT--------E------
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC---cCc--------e------
Confidence 468999999999999875543322 25999998532 357887642210 000 0
Q ss_pred HHHHHhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCC--cC-cEEEEEcCCCCHHHHH
Q 003056 78 PELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAA--VV-DCCIGIPVYFTDLQRR 154 (852)
Q Consensus 78 ~~v~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~--~~-~~VitVP~~f~~~qR~ 154 (852)
.-..| ..+|.+ .. =+....+++|+.. ..++.. -. .++||.|...+...|+
T Consensus 79 ------~l~~P-----i~~GvI------------~d-wd~~E~iw~~~f~---~~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 79 ------ELKPI-----IENGLV------------ID-WDTAQEQWQWALQ---NELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp ------EEEES-----EETTEE------------SC-HHHHHHHHHHHHH---HTSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred ------EEecc-----CcCCEE------------cc-HHHHHHHHHHHHH---hhhCCCcccCCceEEEeCCCCcHHHHH
Confidence 00011 113321 11 2333445555443 123321 22 5899999999999999
Q ss_pred HHHHHH-HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHH
Q 003056 155 AVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRD 233 (852)
Q Consensus 155 al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~ 233 (852)
.|.+.+ +.+|++-+.++.++.+|++++|. .+-||+|+|+|+|+++.|. .|.. +........+||++
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~----------~tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~ 198 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGR----------PNCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKF 198 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCC----------CeEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHH
Confidence 999875 88999999999999999977753 1359999999999999874 3321 11111124799999
Q ss_pred HHHHHHHHHHH
Q 003056 234 FDEVLFQHFAA 244 (852)
Q Consensus 234 ~D~~l~~~l~~ 244 (852)
+|..|.++|..
T Consensus 199 lt~~L~~lL~~ 209 (498)
T 3qb0_A 199 INHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.24 E-value=2.6e-11 Score=110.22 Aligned_cols=82 Identities=23% Similarity=0.364 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhh-hhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHH
Q 003056 619 VMEETKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEER 697 (852)
Q Consensus 619 ~~~~~~~akN~LEs~iy~~r~~L~~-~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R 697 (852)
.+|++.++||.||+|||.+|..|.+ .|..++++++++.|...|.++++||+.+ .+++.++|+.|+++|+.++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999974 5889999999999999999999999985 6789999999999999999999999
Q ss_pred HHhh
Q 003056 698 YKEF 701 (852)
Q Consensus 698 ~~e~ 701 (852)
++..
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9864
No 33
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.12 E-value=7.5e-10 Score=130.78 Aligned_cols=103 Identities=16% Similarity=0.334 Sum_probs=77.3
Q ss_pred HHhcCCCcC-----cEEEEEcCCCCHHHHHHHHHHH-HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCC
Q 003056 130 ESNLNAAVV-----DCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGH 203 (852)
Q Consensus 130 ~~~~~~~~~-----~~VitVP~~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~Gg 203 (852)
...++.... .+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|. .+-+|||+|+
T Consensus 186 ~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~----------~tglVVDiG~ 255 (593)
T 4fo0_A 186 QKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL----------SSTCIVDVGD 255 (593)
T ss_dssp HHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC----------SEEEEEEECS
T ss_pred HHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC----------CceEEEEeCC
Confidence 345665443 3999999999999998887764 77899999999999999977753 3579999999
Q ss_pred ceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHH
Q 003056 204 ASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAK 245 (852)
Q Consensus 204 gT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~ 245 (852)
+.|.|+-|. +|.. +....-...+||++++..|.++|..+
T Consensus 256 ~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 256 QKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp SCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred CceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 999988762 2211 11111124699999999999888653
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.07 E-value=1.2e-09 Score=121.04 Aligned_cols=196 Identities=18% Similarity=0.183 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHc-CC--cceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCC
Q 003056 151 LQRRAVIDAATIA-GL--HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDR 227 (852)
Q Consensus 151 ~qR~al~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~ 227 (852)
.+-+.+.+|.+.+ || .+-. -||.||+++...... .+..++++||||||||++++. ++.+.... ..
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-----~eLGvaiIDmGGGTTd~sVf~--~G~lv~a~---~i 435 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-----TTRPLAILDLGAGSTDASIIN--PKGDIIAT---HL 435 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-----CCSSEEEEEECSSEEEEEEEC--TTCCEEEE---EE
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-----CcCCeEEEEeCCCcceEEEEc--CCcEEEEE---Ee
Confidence 3457888999999 99 6666 899999887644221 367799999999999999964 43332221 25
Q ss_pred CcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCC----------CCcccEEE--eccc----CC
Q 003056 228 SVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSA----------NPEAPLNI--ECLM----EE 291 (852)
Q Consensus 228 ~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~----------~~~~~i~i--e~l~----~~ 291 (852)
..||++++..|..-|. +++ +..||++|. +.. .....+.+ +.+. ..
T Consensus 436 p~gG~~VT~DIA~~Lg----------t~d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELG----------LED--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHT----------CCC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 7999999999986542 221 167888888 521 12224445 3221 11
Q ss_pred -----cceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEeCCCCChHHHHHHHHhhcCC
Q 003056 292 -----KDVRGFIKRDE--FEQISAPILERVKRP--LEKALAETGL-----SVEDVHMVEVVGSSSRVPAIIKILTEFFGK 357 (852)
Q Consensus 292 -----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~a~~-----~~~~I~~ViLvGG~sriP~v~~~l~~~fg~ 357 (852)
.+.-..| +.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.++.+.++..+.|+.
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 0111245 555 666 55555554443 2333554322 356789999999999999999999999986
Q ss_pred -CC-------cccCCchhHHHhhHHHhhhh
Q 003056 358 -EP-------RRTMNASECVARGCALQCAI 379 (852)
Q Consensus 358 -~v-------~~~~n~deava~GAa~~aa~ 379 (852)
++ ...-+|..|+|.|.+++.+.
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 43 22347999999999987643
No 35
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.06 E-value=9.6e-10 Score=122.29 Aligned_cols=192 Identities=17% Similarity=0.139 Sum_probs=127.3
Q ss_pred HHHHHHHHHHc-CC--cceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCc
Q 003056 153 RRAVIDAATIA-GL--HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSV 229 (852)
Q Consensus 153 R~al~~Aa~~A-Gl--~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~l 229 (852)
-+.+..|.+.+ || .+-. -||.||+++...... .+..++++||||||||++++.-. .+.... ....
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-----~elGvaiIDmGgGTTd~sVf~~g--~lv~a~---~ip~ 439 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-----CAAPLAILDLGAGSTDAAIVNAE--GQITAV---HLAG 439 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-----CCSSEEEEEECSSEEEEEEECSS--SCEEEE---EEEC
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-----CcCCeEEEEeCCCcceEEEEcCC--cEEEEE---Eecc
Confidence 35688888888 99 6655 899999887644221 36779999999999999996433 332211 2579
Q ss_pred ccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCC----------CCcccEEE--ecccCC---c--
Q 003056 230 GGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSA----------NPEAPLNI--ECLMEE---K-- 292 (852)
Q Consensus 230 GG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~----------~~~~~i~i--e~l~~~---~-- 292 (852)
||++++..|..-|. .++ +..||++|. +.. .....+.+ +.+... .
T Consensus 440 gG~~VT~DIA~~Lg----------~~d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 440 AGNMVSLLIKTELG----------LED--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp CHHHHHHHHHHHHT----------CSC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred chHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 99999999986542 221 167888888 521 12224444 322110 1
Q ss_pred ----ceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEeCCCCChHHHHHHHHhhcCC-C
Q 003056 293 ----DVRGFIKRDE--FEQISAPILERVKRP--LEKALAETGL-----SVEDVHMVEVVGSSSRVPAIIKILTEFFGK-E 358 (852)
Q Consensus 293 ----d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~a~~-----~~~~I~~ViLvGG~sriP~v~~~l~~~fg~-~ 358 (852)
+.-..| +.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.++.+.++..+.|+. +
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 111244 455 666 55555554443 4455777654 245779999999999999999999999975 3
Q ss_pred C-------cccCCchhHHHhhHHHhh
Q 003056 359 P-------RRTMNASECVARGCALQC 377 (852)
Q Consensus 359 v-------~~~~n~deava~GAa~~a 377 (852)
+ ...-+|..|+|.|.+++.
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhh
Confidence 3 223479999999999764
No 36
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.98 E-value=4.4e-10 Score=103.11 Aligned_cols=80 Identities=16% Similarity=0.368 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhh-hhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHH
Q 003056 620 MEETKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERY 698 (852)
Q Consensus 620 ~~~~~~akN~LEs~iy~~r~~L~~-~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~ 698 (852)
+|++.++||.||+|||.+|..|.+ .+...+++++|+.|...|.++++||+.+ .++++++|+.++++|++++.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 566799999999999999999964 4888999999999999999999999854 66889999999999999999999988
Q ss_pred Hh
Q 003056 699 KE 700 (852)
Q Consensus 699 ~e 700 (852)
+.
T Consensus 92 y~ 93 (120)
T 2p32_A 92 YQ 93 (120)
T ss_dssp CC
T ss_pred HH
Confidence 74
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.88 E-value=1.1e-09 Score=99.59 Aligned_cols=77 Identities=22% Similarity=0.419 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHhHHHhhh-hhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHh
Q 003056 623 TKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 700 (852)
Q Consensus 623 ~~~akN~LEs~iy~~r~~L~~-~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e 700 (852)
+.++||.||+|||.+|..|.+ ++...+++++|+.|...|.++++||+++ .++++++|+.++++|++++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999963 6888999999999999999999999743 5578899999999999999999999875
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.85 E-value=3.2e-07 Score=96.73 Aligned_cols=172 Identities=19% Similarity=0.173 Sum_probs=97.9
Q ss_pred ceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHHH
Q 003056 167 PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKF 246 (852)
Q Consensus 167 ~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~ 246 (852)
...+++|.+|.+.+..... + ..-.++|+||+++.+..+ .++.+.-......+..|+-. +.+++...+
T Consensus 76 ~~~~v~Ei~ah~~ga~~~~---~----~~~~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~----~le~~a~~l 142 (270)
T 1hux_A 76 ADKQMSELSCHAMGASFIW---P----NVHTVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGR----FLDVMANIL 142 (270)
T ss_dssp CSEEECHHHHHHHHHHHHC---T----TCCEEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHH----HHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHhC---C----CCCEEEEECCCceEEEEE--eCCceeeeccccccchhhHH----HHHHHHHHh
Confidence 3467999999986542221 2 122589999998887766 56654323333233344433 344444433
Q ss_pred HhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCCcceEEEecHHHH----------HHHHHHHHHHHHH
Q 003056 247 KEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEF----------EQISAPILERVKR 316 (852)
Q Consensus 247 ~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~ef----------e~l~~~~~~~i~~ 316 (852)
++++.. |-+.+.+.+.-+....... .+.+.++ ++++..+++.+..
T Consensus 143 ----g~~~~e-------l~~la~~~~~p~~~~~~c~--------------vfa~s~v~~l~~~g~~~~di~~av~e~Va~ 197 (270)
T 1hux_A 143 ----EVKVSD-------LAELGAKSTKRVAISSTCT--------------VFAESEVISQLSKGTDKIDIIAGIHRSVAS 197 (270)
T ss_dssp ----TCCTTT-------HHHHHTTCCSCCCCCCCSH--------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----CCCHHH-------HHHHHhhCCCCCCcccccc--------------hhHhHHHHHHhhCCCCHHHHHHHHHHHHHH
Confidence 333311 1122212111111111000 1122222 3334444444444
Q ss_pred HHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhh
Q 003056 317 PLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAIL 380 (852)
Q Consensus 317 ~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~l 380 (852)
-+.+.++..++ .+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||++|...
T Consensus 198 ~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 198 RVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 44444443221 3679999999999999999999999988888788889999999998653
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.06 E-value=0.00018 Score=75.56 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=54.3
Q ss_pred ecHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCC-CCChHHHHHHHHhhc---CCCCcccCCchhHHHhh
Q 003056 298 IKRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGS-SSRVPAIIKILTEFF---GKEPRRTMNASECVARG 372 (852)
Q Consensus 298 itr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG-~sriP~v~~~l~~~f---g~~v~~~~n~deava~G 372 (852)
++++++-. ++.-+.+++..+...+.+..+ ++.|+++|| .+..|.+++.|++++ +.++..+-++..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 46666543 333444555444444444444 456999999 899999999999985 56777888999999999
Q ss_pred HHHhh
Q 003056 373 CALQC 377 (852)
Q Consensus 373 Aa~~a 377 (852)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99874
No 40
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.70 E-value=7.2e-05 Score=85.91 Aligned_cols=125 Identities=18% Similarity=0.248 Sum_probs=87.1
Q ss_pred CcEEEEEcCCCCHHHHHHHHHHH-HHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 003056 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (852)
Q Consensus 138 ~~~VitVP~~f~~~qR~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~ 216 (852)
..++||.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|+ ..+-||+|+|+|+|+++.|. .|
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---------~ttGLVVDiG~g~T~VvPV~--eG 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---------STSTCVVNIGAAETRIACVD--EG 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---------SSCEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---------CCceEEEcCCCceEEEEEEe--CC
Confidence 46999999999999999998887 57899999999999999877653 24679999999999999873 33
Q ss_pred eEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCC
Q 003056 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANP 279 (852)
Q Consensus 217 ~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~ 279 (852)
.. +........+||+++|..|.++|..+--.....++. ... =+..++.+|+.+..-.
T Consensus 291 ~v-l~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~--t~~---e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 291 TV-LEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKID--SKH---GWLLAERLKKNFTTFQ 347 (655)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTT--SHH---HHHHHHHHHHHHCCCC
T ss_pred EE-EhhheeeecchHHHHHHHHHHHHHHcCCCccccCCC--Ccc---hHHHHHHHHHheEEEc
Confidence 21 111111257999999999999987641000001111 111 1255677788776553
No 41
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.87 E-value=0.21 Score=53.68 Aligned_cols=65 Identities=14% Similarity=0.019 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc---CCCCcccC---CchhHHHhhHHHhhhh
Q 003056 310 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAI 379 (852)
Q Consensus 310 ~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f---g~~v~~~~---n~deava~GAa~~aa~ 379 (852)
+.+.+...+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.++++|++.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 34444555555555444 568999999999999999999877 44444433 3467889998876543
No 42
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.68 E-value=0.28 Score=52.22 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHH
Q 003056 154 RAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRD 233 (852)
Q Consensus 154 ~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~ 233 (852)
..+..+-+..|+++--|=.+-+|....+|+... ++. .....||+|+|||+|.++++. ++.+.- . .+.++|.-.
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~-~~~-~~~~~lviDIGGGStEl~~~~--~~~~~~--~-~Sl~lG~vr 165 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQA-VPM-EDHISLAMDIGGGSVEFIIGN--KNEILW--K-QSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH-SCC-TTCCEEEEEECSSCEEEEEEC--SSCEEE--E-EEESCCHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhc-CCC-CCCCEEEEEeCCCceEEEEEE--CCeEee--e-EEEechhhH
Confidence 334455556799874444445554444444332 332 245799999999999999975 333322 2 246788887
Q ss_pred HHHHH
Q 003056 234 FDEVL 238 (852)
Q Consensus 234 ~D~~l 238 (852)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 76643
No 43
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.55 E-value=0.049 Score=62.29 Aligned_cols=83 Identities=13% Similarity=0.326 Sum_probs=59.0
Q ss_pred ecHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQIS-APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+.+ +.+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHH
Confidence 4676665433 33434444444433233454 47889999999999999999999999887553 5678999999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766554
No 44
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.52 E-value=0.72 Score=48.42 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=35.1
Q ss_pred CccEEEEeCCCCChHHHHHHHHhhcC-CCCcccCCchhHHHhhHHHhhhh
Q 003056 331 DVHMVEVVGSSSRVPAIIKILTEFFG-KEPRRTMNASECVARGCALQCAI 379 (852)
Q Consensus 331 ~I~~ViLvGG~sriP~v~~~l~~~fg-~~v~~~~n~deava~GAa~~aa~ 379 (852)
+.+.|+|.||.+..+.+.+.|++.+. .++.... .+.+.++||++.+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 35679999998776888888877774 3455455 567889999987753
No 45
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.52 E-value=0.013 Score=62.58 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHH
Q 003056 154 RAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRD 233 (852)
Q Consensus 154 ~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~ 233 (852)
..+..+-+..|+++--|-.+.+|.....|+... ++ .....+|+|+|||+|.+++++ ++.+ .. ..+..+|+..
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~-l~--~~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~~G~v~ 172 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYS-LK--PEGEVCVVDQGGGSTEYVFGK--GYKV--RE-VISLPIGIVN 172 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHH-TC--CCSEEEEEEEETTEEEEEEEE--TTEE--EE-EEEECCCHHH
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhh-cc--cCCCEEEEEeCCCcEEEEEEe--CCce--ee-EEEEeccHHH
Confidence 344444457899875555555665544454432 33 245799999999999999964 4443 22 2247899998
Q ss_pred HHHHH
Q 003056 234 FDEVL 238 (852)
Q Consensus 234 ~D~~l 238 (852)
+.+.+
T Consensus 173 l~e~~ 177 (315)
T 1t6c_A 173 LTETF 177 (315)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87765
No 46
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.41 E-value=0.044 Score=63.72 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=57.0
Q ss_pred ecHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHhhcCCCCcccCCchhHHHhhHHH
Q 003056 298 IKRDEFEQISAP-ILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFGKEPRRTMNASECVARGCAL 375 (852)
Q Consensus 298 itr~efe~l~~~-~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~s-riP~v~~~l~~~fg~~v~~~~n~deava~GAa~ 375 (852)
-+|.+|-+.+-+ +.-.+...+ +.|+..|. .++.|.++||++ +.+.+.+++.+.||.++... .+.|+.|+|||+
T Consensus 409 ~t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~ 483 (572)
T 3jvp_A 409 TKPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAM 483 (572)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHH
Confidence 367765444332 323333333 34444443 578999999999 99999999999999988554 467899999999
Q ss_pred hhhhhcC
Q 003056 376 QCAILSP 382 (852)
Q Consensus 376 ~aa~ls~ 382 (852)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9986554
No 47
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.31 E-value=0.013 Score=67.36 Aligned_cols=84 Identities=14% Similarity=0.138 Sum_probs=55.7
Q ss_pred ecHHHHHHHH-HHHHHHHHHHHHHHHHHcCC-CCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHH
Q 003056 298 IKRDEFEQIS-APILERVKRPLEKALAETGL-SVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCAL 375 (852)
Q Consensus 298 itr~efe~l~-~~~~~~i~~~i~~~l~~a~~-~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~ 375 (852)
-+|.+|-+.+ +.+.-.+...++. |+..+. .. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+
T Consensus 392 ~~~~~l~RAvlEgia~~~r~~l~~-l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~ 468 (520)
T 4e1j_A 392 TGPAEFARAALEAVCYQTRDLLEA-MHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAW 468 (520)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-HHHHCC------CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCC-CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHH
Confidence 3566655433 2333333333333 333200 01 47889999999999999999999999988654 456799999999
Q ss_pred hhhhhcCCC
Q 003056 376 QCAILSPTF 384 (852)
Q Consensus 376 ~aa~ls~~~ 384 (852)
.|+.-.+.+
T Consensus 469 lA~~a~G~~ 477 (520)
T 4e1j_A 469 LAGSRAGVW 477 (520)
T ss_dssp HHHHHHTSS
T ss_pred HHHHHcCCc
Confidence 998766544
No 48
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.22 E-value=1.7 Score=46.58 Aligned_cols=61 Identities=7% Similarity=-0.070 Sum_probs=41.4
Q ss_pred CcCcEEEEEcCCCCHHHHHHHHHHHHH-cC--CcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCcee
Q 003056 136 AVVDCCIGIPVYFTDLQRRAVIDAATI-AG--LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASL 206 (852)
Q Consensus 136 ~~~~~VitVP~~f~~~qR~al~~Aa~~-AG--l~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~ 206 (852)
.+..+.|++|...+......+.+..+. .| .-.+.+.|+..|+|+++ . . ...+++=+|.|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~-------~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P-------DGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S-------SCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C-------CCcEEEEEcCCce
Confidence 577899999999987665566666544 34 13468999999999873 2 1 2355555676653
No 49
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.20 E-value=0.57 Score=49.44 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=29.6
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++-....... ..++++++-+|.| +-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAAQ---GEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCCC---CCCCEEEEEECCc-eeEEEE
Confidence 4776 579999999998765443211 2467888888887 444554
No 50
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.12 E-value=0.025 Score=60.93 Aligned_cols=45 Identities=18% Similarity=0.047 Sum_probs=39.1
Q ss_pred cEEEEeCC-CCChHHHHHHHHhhcC------CCCcccCCchhHHHhhHHHhh
Q 003056 333 HMVEVVGS-SSRVPAIIKILTEFFG------KEPRRTMNASECVARGCALQC 377 (852)
Q Consensus 333 ~~ViLvGG-~sriP~v~~~l~~~fg------~~v~~~~n~deava~GAa~~a 377 (852)
+.|+++|| .++.|.+++.|+..++ .++....++..+.|+|||+.+
T Consensus 307 ~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 307 DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 45999999 8999999999999873 567777899999999999875
No 51
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.12 E-value=0.4 Score=51.08 Aligned_cols=44 Identities=18% Similarity=0.202 Sum_probs=30.8
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++........ ...+++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQ---GHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCC---CCCCEEEEEeCcc-eEEEEE
Confidence 4776 679999999998765432211 2467888999988 556654
No 52
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.91 E-value=0.01 Score=68.77 Aligned_cols=84 Identities=11% Similarity=0.182 Sum_probs=61.5
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhH
Q 003056 297 FIKRDEFEQISAPILERVKRPLEKA---LAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGC 373 (852)
Q Consensus 297 ~itr~efe~l~~~~~~~i~~~i~~~---l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GA 373 (852)
.-+|.+|-+++.-+++-+.--+..+ |+..|. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+||
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGA 483 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGS 483 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHH
Confidence 4578888544444554444444333 344443 57899999999999999999999999888654 4567999999
Q ss_pred HHhhhhhcCCC
Q 003056 374 ALQCAILSPTF 384 (852)
Q Consensus 374 a~~aa~ls~~~ 384 (852)
|+.|+.-.+.+
T Consensus 484 A~lA~~a~G~~ 494 (554)
T 3l0q_A 484 AMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHcCCc
Confidence 99998766544
No 53
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.84 E-value=1.1 Score=47.81 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=30.1
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++
T Consensus 120 ~~~p-V~v~NDa~aaalgE~~~g~~---~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 120 IGRS-VKIENDANCFALSEAWDEEL---QDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HSSC-CEEEEHHHHHHHHHHTSTTT---TTCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecchhHHHHHHHHhCCC---CCCCcEEEEEeCcc-ceEEEE
Confidence 4786 68999999999876543221 12467888889887 455554
No 54
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.78 E-value=0.014 Score=66.93 Aligned_cols=79 Identities=20% Similarity=0.311 Sum_probs=56.6
Q ss_pred cHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhh
Q 003056 299 KRDEFEQISA-PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (852)
Q Consensus 299 tr~efe~l~~-~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~a 377 (852)
+|.+|-+.+- .+.-.+...+ +.|++.+. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 6666554333 3333333333 34455554 47889999999999999999999999988654 45678999999998
Q ss_pred hhhcC
Q 003056 378 AILSP 382 (852)
Q Consensus 378 a~ls~ 382 (852)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86543
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.63 E-value=0.015 Score=67.20 Aligned_cols=76 Identities=13% Similarity=0.108 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhhhc
Q 003056 305 QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (852)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ls 381 (852)
.++.-+++.+.--+..+++..+.....++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|+.-.
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHh
Confidence 3444455555444555555544444467889999999999999999999999988554 567899999999987644
No 56
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.59 E-value=0.016 Score=66.36 Aligned_cols=81 Identities=20% Similarity=0.211 Sum_probs=57.1
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCC-cccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEP-RRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v-~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+ -+++.+.-.+..+++...- .. ++.|.++||+++.+.+.+++.+.||.++ .. ..+.|+.|+|||+.
T Consensus 374 ~~~~~l~R---AvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~l 447 (511)
T 3hz6_A 374 TTRAQILL---AVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAAL 447 (511)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHH
Confidence 35666543 3333333333333333211 23 7899999999999999999999999988 54 45889999999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (511)
T 3hz6_A 448 AAVELEWS 455 (511)
T ss_dssp HHHHTTSC
T ss_pred HHHHhCCc
Confidence 98766543
No 57
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=95.56 E-value=0.046 Score=48.79 Aligned_cols=81 Identities=21% Similarity=0.384 Sum_probs=63.8
Q ss_pred hhhcchHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHH
Q 003056 700 EFTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAE 779 (852)
Q Consensus 700 e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~ 779 (852)
+...|-++...|...+..+++.+.. ...-..++.+++..|...|+++..||+.. .-....+|+.|++
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e-~~~~~kl~~eek~~i~~~i~e~~~wL~~~------------~~a~~e~i~~k~~ 69 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDAN------------TLAEKDEFEHKRK 69 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC-GGGBTTBCHHHHHHHHHHHHHHHHHHHHC------------TTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC------------CcCCHHHHHHHHH
Confidence 4456677888888999888888854 11234699999999999999999999751 1124689999999
Q ss_pred HHHHHhhhhhcCCC
Q 003056 780 ALDRFCRPIMTKPK 793 (852)
Q Consensus 780 ~l~~~~~~l~~kpk 793 (852)
.|+..+.+|+.+.-
T Consensus 70 eL~~~~~~i~~k~y 83 (113)
T 3lof_A 70 ELEQVCNPIISGLY 83 (113)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987654
No 58
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.48 E-value=0.02 Score=65.52 Aligned_cols=80 Identities=15% Similarity=0.213 Sum_probs=56.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhh
Q 003056 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (852)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa 378 (852)
+|.+|- .-+++.+.-.+..+++...-.. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|+
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRP-VVKETTALGAAYLAG 439 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEc-CCCcchHHHHHHHHH
Confidence 555544 3344444444444444432222 57889999999999999999999999988655 445699999999998
Q ss_pred hhcCC
Q 003056 379 ILSPT 383 (852)
Q Consensus 379 ~ls~~ 383 (852)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76554
No 59
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.47 E-value=0.018 Score=65.90 Aligned_cols=82 Identities=6% Similarity=0.007 Sum_probs=57.6
Q ss_pred ecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQISA-PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l~~-~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+.+- .+.-.+...+ +.|+..+. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 363 ~~~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 437 (504)
T 3ll3_A 363 HQKPEMARAVIEGIIFNLYDAA-SNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFL 437 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-HHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHH
Confidence 36666544333 2333333333 34444443 58899999999999999999999999988654 4667999999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 438 A~~a~G~~ 445 (504)
T 3ll3_A 438 ARQALGLN 445 (504)
T ss_dssp HHHHTTSC
T ss_pred HHHHcCcc
Confidence 98765543
No 60
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.47 E-value=1.9 Score=44.88 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=29.0
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++... ... ...+++++-+|.| +-.+++
T Consensus 94 ~~~p-v~v~NDa~aaa~~e~~-~~~----~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 94 YQLP-VHLENDANCVGLSELL-AHP----ELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GCCC-EEEEEHHHHHHHHHHH-HCT----TCSSEEEEEESSS-EEEEEE
T ss_pred cCCC-EEEechHHHHHHHHHH-hcC----CCCeEEEEEECCc-eEEEEE
Confidence 5776 5799999999987644 211 2467888889987 445554
No 61
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.47 E-value=0.013 Score=66.74 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=56.4
Q ss_pred ecHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQIS-APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+.+ +.+.-.+...++ .|+..+. .++.|.++||+++.+.+.+++.+.||.++......+.+.|+|||+.
T Consensus 356 ~~~~~~~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 356 HGPNELARAVLEGVGYALADGMD-VVHACGI---KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHH
Confidence 3566654332 333333333333 3344343 4678999999999999999999999999877655554589999999
Q ss_pred hhhhcCC
Q 003056 377 CAILSPT 383 (852)
Q Consensus 377 aa~ls~~ 383 (852)
|+.-.+.
T Consensus 432 A~~~~g~ 438 (484)
T 2itm_A 432 AQIAANP 438 (484)
T ss_dssp HHHHHCT
T ss_pred HHHHcCC
Confidence 8865543
No 62
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.46 E-value=0.85 Score=48.44 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=30.1
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++........ ....++++-+|.| +-.+++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~---~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGE---NNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCC---CCCcEEEEEECCc-eEEEEE
Confidence 4776 679999999998754432211 2467888899988 556654
No 63
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.42 E-value=0.019 Score=66.18 Aligned_cols=84 Identities=17% Similarity=0.287 Sum_probs=60.2
Q ss_pred EecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHH
Q 003056 297 FIKRDEFEQISA-PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCAL 375 (852)
Q Consensus 297 ~itr~efe~l~~-~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~ 375 (852)
.-+|.+|-+.+- .+.-.+...++..-+.+|.. ++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+
T Consensus 370 ~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 370 GVNANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAY 445 (526)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHH
Confidence 346666554433 33334444444443445654 7889999999999999999999999988655 456889999999
Q ss_pred hhhhhcCCC
Q 003056 376 QCAILSPTF 384 (852)
Q Consensus 376 ~aa~ls~~~ 384 (852)
.|+.-.+.+
T Consensus 446 lA~~a~G~~ 454 (526)
T 3ezw_A 446 LAGLAVGFW 454 (526)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhCCC
Confidence 998776654
No 64
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.42 E-value=0.49 Score=49.78 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=33.8
Q ss_pred CccEEEEeCCCCChHHHHHHHHhhcCC------CCcccCCchhHHHhhHHHhhhh
Q 003056 331 DVHMVEVVGSSSRVPAIIKILTEFFGK------EPRRTMNASECVARGCALQCAI 379 (852)
Q Consensus 331 ~I~~ViLvGG~sriP~v~~~l~~~fg~------~v~~~~n~deava~GAa~~aa~ 379 (852)
+.+.|+|-||.+..+.+.+.|++.+.. .+......+.+.++||++++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 357799999988777666667666631 2333445677999999987753
No 65
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.39 E-value=0.023 Score=65.16 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=58.1
Q ss_pred ecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQISA-PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l~~-~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+.+- .+.-.+...+ +.|+..|. .++.|.++||+++.+.+.+++.+.||.++..... .|+.|+|||+.
T Consensus 370 ~~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~l 444 (508)
T 3ifr_A 370 HTRGHLWRALLEAVALAFRHHV-AVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWV 444 (508)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHH
Confidence 36766654433 3333333333 34445554 4788999999999999999999999998866543 56889999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 445 A~~a~G~~ 452 (508)
T 3ifr_A 445 AAIGGGDD 452 (508)
T ss_dssp HHHHTCSS
T ss_pred HHHHhCCC
Confidence 98766543
No 66
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.28 E-value=0.027 Score=64.40 Aligned_cols=83 Identities=16% Similarity=0.308 Sum_probs=58.9
Q ss_pred ecHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQIS-APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+.+ +.+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 373 ~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 373 TEKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHH
Confidence 3566655433 33434444444433333454 47889999999999999999999999887554 4678999999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 449 a~~a~G~~ 456 (501)
T 3g25_A 449 AGLAVGFW 456 (501)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766554
No 67
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.24 E-value=0.35 Score=51.61 Aligned_cols=45 Identities=9% Similarity=0.190 Sum_probs=30.8
Q ss_pred Hc-CCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 162 IA-GLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 162 ~A-Gl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.. |++ +.+.|+..|+|++-....... ...+++++-+|.| +-.+++
T Consensus 116 ~~~~~p-V~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 116 EFPHIH-FKIENDAKCAALGEYYFGENK---RMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp HCTTSE-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred HcCCCC-EEEEchHHHHHHHHHHhCCCC---CCCcEEEEEECCc-eEEEEE
Confidence 45 776 579999999998765442211 2467888899988 555554
No 68
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.88 E-value=0.036 Score=63.50 Aligned_cols=83 Identities=17% Similarity=0.316 Sum_probs=58.0
Q ss_pred ecHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQIS-APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+.+ +.+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 370 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 370 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHH
Confidence 3566655433 33334444444433233354 47889999999999999999999999888654 4667999999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 446 A~~a~G~~ 453 (510)
T 2p3r_A 446 AGLAVGFW 453 (510)
T ss_dssp HHHHHTSS
T ss_pred HHHHhCcc
Confidence 98765543
No 69
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.74 E-value=0.052 Score=62.10 Aligned_cols=83 Identities=16% Similarity=0.260 Sum_probs=59.2
Q ss_pred ecHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 298 IKRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 298 itr~efe~l-~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
-+|.+|-+. ++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHH
Confidence 366666543 334444444445443333454 36789999999999999999999999988654 4567999999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 448 A~~~~G~~ 455 (504)
T 2d4w_A 448 AGIAVGFW 455 (504)
T ss_dssp HHHHHTSS
T ss_pred HHhhcCcc
Confidence 98765543
No 70
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.53 E-value=0.061 Score=61.47 Aligned_cols=82 Identities=10% Similarity=0.254 Sum_probs=57.9
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCc-cEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 299 KRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDV-HMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~I-~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
+|.++-+ +++.+.-.+...++..-+..+. .+ +.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 5666554 3334444444444443333454 35 679999999999999999999999988654 4556999999999
Q ss_pred hhhhcCCC
Q 003056 377 CAILSPTF 384 (852)
Q Consensus 377 aa~ls~~~ 384 (852)
|+.-.+.+
T Consensus 452 a~~~~G~~ 459 (503)
T 2w40_A 452 AGLEVKIW 459 (503)
T ss_dssp HHHHTTCS
T ss_pred HHHHhCcc
Confidence 98765543
No 71
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.50 E-value=0.048 Score=62.25 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=55.8
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhh
Q 003056 299 KRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (852)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~a 377 (852)
+|.+|-+ +++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 5666543 3334444444444433222343 46789999999999999999999999988654 45669999999998
Q ss_pred hhhcC
Q 003056 378 AILSP 382 (852)
Q Consensus 378 a~ls~ 382 (852)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 76544
No 72
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.32 E-value=0.065 Score=61.04 Aligned_cols=79 Identities=11% Similarity=0.021 Sum_probs=54.1
Q ss_pred EEecHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHH
Q 003056 296 GFIKRDEFEQIS-APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCA 374 (852)
Q Consensus 296 ~~itr~efe~l~-~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa 374 (852)
..-+|.+|-+.+ +.+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++.... .|+.|+|||
T Consensus 360 ~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 360 IPESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHH
Confidence 345677765433 33444444444433222454 367899999999999999999999999886543 589999996
Q ss_pred Hhhhh
Q 003056 375 LQCAI 379 (852)
Q Consensus 375 ~~aa~ 379 (852)
+.|+.
T Consensus 435 ~~A~~ 439 (489)
T 2uyt_A 435 GIQLM 439 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 73
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=93.69 E-value=2.7 Score=44.60 Aligned_cols=44 Identities=14% Similarity=0.009 Sum_probs=29.2
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++....... .....++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~---~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF---TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG---GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 68999999999875432211 12467888889988 445554
No 74
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.35 E-value=2.1 Score=46.65 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=41.6
Q ss_pred CCcCcEEEEEcCCCCHH----------------HHHHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEE
Q 003056 135 AAVVDCCIGIPVYFTDL----------------QRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAF 198 (852)
Q Consensus 135 ~~~~~~VitVP~~f~~~----------------qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv 198 (852)
..+..+.|++|...+.. -+..+.+. .|++ +.+.|+..|+|++....... . ..+++
T Consensus 147 ~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-V~v~NDanaaalaE~~~g~~----~-~~~v~ 217 (380)
T 2hoe_A 147 SKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEK---YGIE-VWVENDADMGAVGEKWYTKR----D-DSFAW 217 (380)
T ss_dssp CCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHH---HCSE-EEEEEHHHHHHHHHHHHTTC----C-SCEEE
T ss_pred CcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHH---hCCC-EEEechHHHHHHHHHHhCCC----C-CcEEE
Confidence 34666778888754321 12333333 4776 58999999999876543221 2 67888
Q ss_pred EEeCCceeEEEEE
Q 003056 199 VDIGHASLQVCIA 211 (852)
Q Consensus 199 ~D~GggT~dvsiv 211 (852)
+-+|.| +-.+++
T Consensus 218 l~~GtG-iG~giv 229 (380)
T 2hoe_A 218 ILTGKG-IGAGII 229 (380)
T ss_dssp EEESSS-CEEEEE
T ss_pred EEeCCc-eEEEEE
Confidence 888887 445554
No 75
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=93.15 E-value=12 Score=42.72 Aligned_cols=183 Identities=13% Similarity=0.083 Sum_probs=92.7
Q ss_pred CcCcEEEEE-cCCCCHHHHHHHHH---HHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 136 AVVDCCIGI-PVYFTDLQRRAVID---AATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 136 ~~~~~VitV-P~~f~~~qR~al~~---Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.+..+++|. |.+|+.. |-.+.- -|...|.+++. |+...|=+++..+.. .+. .+ +++-+.||+|.+..+
T Consensus 72 ~id~ia~~~gPG~~~~l-~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~-~~~--~p---~~l~vsGg~t~~~~~ 143 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSL-RVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTT-EAE--DP---LTLYVSGGNTQVIAY 143 (540)
T ss_dssp GCCEEEEEEESSCHHHH-HHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHS-SCS--SC---EEEEECSSCEEEEEE
T ss_pred HCcEEEEecCCCchhhH-HHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhc-CCC--CC---cEEEEcCCCcEEEEE
Confidence 466677775 7776654 222221 22334766554 455444443322222 221 23 566667788776544
Q ss_pred EeeCCeEEEEEEeCCCCcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCC
Q 003056 212 GFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE 291 (852)
Q Consensus 212 ~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~ 291 (852)
.++.+++++...|. --|+.||..=. . .++.....+ .|...|...... +.++....+
T Consensus 144 --~~~~~~~lg~t~d~-s~G~~~D~~a~-----~----lgl~~~gg~----~ie~lA~~g~~~--------~~~p~~~~~ 199 (540)
T 3en9_A 144 --VSKKYRVFGETLDI-AVGNCLDQFAR-----Y----VNLPHPGGP----YIEELARKGKKL--------VDLPYTVKG 199 (540)
T ss_dssp --ETTEEEEEEEBSSS-CHHHHHHHHHH-----H----TTCCSSCHH----HHHHHHHTCCCC--------CCCCCCEET
T ss_pred --eCCceEEEeeccch-HhHHHHHHHHH-----H----cCCCCCCHH----HHHHHHHcCCcc--------CcCCCCCCC
Confidence 46889999987654 34566654221 1 233322212 222333222111 111111112
Q ss_pred cceEEE-------------ecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc
Q 003056 292 KDVRGF-------------IKRDEFEQISA-PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF 355 (852)
Q Consensus 292 ~d~~~~-------------itr~efe~l~~-~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f 355 (852)
.+|++. .+..++...++ -+++-+...+.++++..+ ++.|+|+||.+....+++.|.+.+
T Consensus 200 ~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 200 MDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp TEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred cceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 232210 11223322222 234444555666666655 468999999999999999999976
No 76
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.85 E-value=7.7 Score=41.32 Aligned_cols=67 Identities=16% Similarity=0.098 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc---CCCCcccC---CchhHHHhhHHHhhhhhc
Q 003056 310 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAILS 381 (852)
Q Consensus 310 ~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f---g~~v~~~~---n~deava~GAa~~aa~ls 381 (852)
+.+.+...+.++++..+ ++.|+|+||.+...++++.|.+.+ |.++..+. -.|.++++|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 44555566666666655 468999999999999999999887 54443332 368889999987654433
No 77
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=92.14 E-value=3.8 Score=44.98 Aligned_cols=44 Identities=18% Similarity=0.284 Sum_probs=30.0
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++........ ....++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASR---GARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCC---CCCcEEEEEECCc-EEEEEE
Confidence 4776 579999999998764432211 2467888889987 445554
No 78
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=91.40 E-value=0.51 Score=42.43 Aligned_cols=79 Identities=15% Similarity=0.233 Sum_probs=61.3
Q ss_pred hhcchHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHH
Q 003056 701 FTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEA 780 (852)
Q Consensus 701 ~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~ 780 (852)
...|-++-..+...|..+++.+.. ...-..++.+++..|...|+++..||+.. +. -...+|+.+++.
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e-~~~~dkl~~eek~~I~~~i~el~~~L~~~---~~---------ad~e~ik~k~~e 79 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDKCDEILKWLDSN---QT---------AEKEEFEHQQKD 79 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTC-TTTGGGSCHHHHHHHHHHHHHHHHHHHHH---TT---------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC---Cc---------CCHHHHHHHHHH
Confidence 456777888888999999888844 11124599999999999999999999731 11 124689999999
Q ss_pred HHHHhhhhhcCC
Q 003056 781 LDRFCRPIMTKP 792 (852)
Q Consensus 781 l~~~~~~l~~kp 792 (852)
|+..+.+|..+.
T Consensus 80 L~~~~~~i~~k~ 91 (120)
T 2p32_A 80 LEGLANPIISKL 91 (120)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
No 79
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=91.25 E-value=0.78 Score=45.90 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003056 706 SVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 785 (852)
Q Consensus 706 ~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 785 (852)
++...+...+..++..+... -..++.+++.++.+.++++..||+.. ...+|+.++++|+..+
T Consensus 146 e~kn~le~~i~~~~~~l~~~---~~~l~~~~k~~i~~~l~~~~~~L~~~---------------~~~~i~~~~~~L~~~~ 207 (219)
T 4e81_A 146 QTRNQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVS 207 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHh---hhhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHH
Confidence 33445555555555555431 13578999999999999999999752 3579999999999999
Q ss_pred hhhhcC
Q 003056 786 RPIMTK 791 (852)
Q Consensus 786 ~~l~~k 791 (852)
.++..+
T Consensus 208 ~~i~~~ 213 (219)
T 4e81_A 208 QKLMEI 213 (219)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998753
No 80
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=90.15 E-value=0.66 Score=41.10 Aligned_cols=73 Identities=19% Similarity=0.396 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHhh
Q 003056 707 VIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFCR 786 (852)
Q Consensus 707 a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~ 786 (852)
+-..+...|..+++.+.. .+.-..++.+++..|...++++..||+..... ...+|+.+++.|+..+.
T Consensus 5 arN~aE~~iy~~e~~L~~-~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~a------------d~~~i~~~~~~L~~~~~ 71 (113)
T 1ud0_A 5 GSHMLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKNQTA------------EKEEFEHQQKELEKVCN 71 (113)
T ss_dssp CHHHHHHHHHHHHHHHTS-GGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcCCcc------------CHHHHHHHHHHHHHHHH
Confidence 345667777777777742 11224689999999999999999999743211 12579999999999999
Q ss_pred hhhcCC
Q 003056 787 PIMTKP 792 (852)
Q Consensus 787 ~l~~kp 792 (852)
+|..+.
T Consensus 72 ~i~~~~ 77 (113)
T 1ud0_A 72 PIITKL 77 (113)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998654
No 81
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=89.87 E-value=21 Score=37.19 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCC--hHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhh
Q 003056 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSR--VPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (852)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sr--iP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa 378 (852)
.+..++++....+-..+...-. . +...|+|.||.+. .|.+.+.+.+.+- -++.+.++||++++.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 3445555555555555554321 2 5678888888764 4556666665431 145667899998874
No 82
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=89.87 E-value=0.25 Score=55.96 Aligned_cols=72 Identities=13% Similarity=0.010 Sum_probs=52.4
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhh-cCCCCcccCCchhHHHhhHHHhhhhh
Q 003056 304 EQISAPILER--VKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEF-FGKEPRRTMNASECVARGCALQCAIL 380 (852)
Q Consensus 304 e~l~~~~~~~--i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~-fg~~v~~~~n~deava~GAa~~aa~l 380 (852)
..++.-+++. +.-.+..+++... ..+.|.++||+++.|.+.+++.+. ||.++...- ..|+.|+|||++|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 3445555543 4444455555432 127899999999999999999999 999886654 4568899999998754
No 83
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=89.58 E-value=1.8 Score=46.56 Aligned_cols=80 Identities=21% Similarity=0.320 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCcceeeechhHHHHHHh-hhhcCCCCC-CCCceEEEEEeCCceeEEEEEEe--eC--CeEEEEEEeCCC
Q 003056 154 RAVIDAATIAGLHPLRLFHETTATALAY-GIYKTDLPE-NDQLNVAFVDIGHASLQVCIAGF--KK--GQLKILGHSFDR 227 (852)
Q Consensus 154 ~al~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~-~~~~~vlv~D~GggT~dvsiv~~--~~--~~~~vl~~~~d~ 227 (852)
..+..+-+..|+++ .+|+-..=|.+.| |+.. .++. .....++++|+|||+|+++++.- .. +.+ .. ....
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~-~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~Sl 180 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATS-VVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFSM 180 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHS-SCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEEE
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEEE
Confidence 34445555679986 5666555555554 4432 2332 01356999999999999999654 21 111 11 2246
Q ss_pred CcccHHHHHHH
Q 003056 228 SVGGRDFDEVL 238 (852)
Q Consensus 228 ~lGG~~~D~~l 238 (852)
.+|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 79999887765
No 84
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=89.06 E-value=14 Score=41.01 Aligned_cols=62 Identities=8% Similarity=-0.039 Sum_probs=42.7
Q ss_pred EcCCCCHHHHHHHHHHHHHcCCc--ceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEE
Q 003056 144 IPVYFTDLQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (852)
Q Consensus 144 VP~~f~~~qR~al~~Aa~~AGl~--~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~ 212 (852)
+|.+-...-++.|.+|...-|++ ++.|+|+.+|++++-+... +..++.+=+|-|+=-..+..
T Consensus 166 ~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 166 ADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp CBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-------CCcEEEEEEeCCcceEEEEc
Confidence 34333456678888888777876 3599999999998766531 35677777888865554444
No 85
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=87.19 E-value=2.7 Score=47.75 Aligned_cols=74 Identities=18% Similarity=0.276 Sum_probs=46.1
Q ss_pred HHHHHHHcCCcceeeechhHHHHHHh-hhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccHHH
Q 003056 156 VIDAATIAGLHPLRLFHETTATALAY-GIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDF 234 (852)
Q Consensus 156 l~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~~~ 234 (852)
+..+-+..|+++ .+|+-..=|.+.| |+.. .++. ....||+|+|||+|.++++ .++.+.- .....+|...+
T Consensus 102 l~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~-~~~~--~~~~lviDIGGGStEl~~~--~~~~~~~---~~Sl~lG~vrl 172 (513)
T 1u6z_A 102 LKRAEKVIPYPI-EIISGNEEARLIFMGVEH-TQPE--KGRKLVIDIGGGSTELVIG--ENFEPIL---VESRRMGCVSF 172 (513)
T ss_dssp HHHHTTTCSSCE-EECCHHHHHHHHHHHHHH-HSCC--CSCEEEEEECSSCEEEEEE--ETTEEEE---EEEESCCHHHH
T ss_pred HHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hccC--CCCEEEEEECCCcEEEEEE--eCCeeeE---EEEEeccHHHH
Confidence 444444569886 5666555444444 4433 2331 2269999999999999986 3444322 22468999888
Q ss_pred HHHH
Q 003056 235 DEVL 238 (852)
Q Consensus 235 D~~l 238 (852)
.+.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7665
No 86
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=86.59 E-value=1.3 Score=44.59 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=51.5
Q ss_pred chHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHH
Q 003056 704 RSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDR 783 (852)
Q Consensus 704 rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~ 783 (852)
+-++...|...+..++..+... -..++.+++..+...+++++.||... ...++..++++|+.
T Consensus 141 ~~e~kn~le~~i~~~~~~l~~~---~~~~~~~~k~~i~~~l~~~~~wl~~~---------------d~~~~~~~~~~L~~ 202 (227)
T 1u00_A 141 LAEQKVEAARVLESLHGALAAD---AALLSAAERQVIDDAAAHLSEVAQGD---------------DVDAIEQAIKNVDK 202 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHTTSS---------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---hccCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHH
Confidence 3444555556666666555431 13589999999999999999999621 15789999999999
Q ss_pred HhhhhhcC
Q 003056 784 FCRPIMTK 791 (852)
Q Consensus 784 ~~~~l~~k 791 (852)
.+.++..+
T Consensus 203 ~~~~i~~r 210 (227)
T 1u00_A 203 QTQDFAAR 210 (227)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998753
No 87
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=82.06 E-value=4.2 Score=46.12 Aligned_cols=73 Identities=21% Similarity=0.226 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCcceeeechh-HHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcccH
Q 003056 154 RAVIDAATIAGLHPLRLFHET-TATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGR 232 (852)
Q Consensus 154 ~al~~Aa~~AGl~~~~li~Ep-~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lGG~ 232 (852)
..+..+-+..|+++ .+|+-. +|...+.|+.. .++ ....||+|+|||+|.++++. ++.+.. ....++|.-
T Consensus 104 ~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~-~~~---~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~lG~v 173 (508)
T 3hi0_A 104 DFIREAEAILGCEI-EVLSGEKEALYSAYGVIS-GFY---QPDGIAGDLGGGSLELIDIK--DKSCGE---GITLPLGGL 173 (508)
T ss_dssp HHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHH-HSS---SCEEEEEEECSSCEEEEEEE--TTEECC---CEEESCCHH
T ss_pred HHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHh-cCC---CCCeEEEEeCCCceEEEEee--CCeeee---EEEecceEE
Confidence 34555556679986 566554 44444445443 233 23459999999999999975 443321 224578887
Q ss_pred HHHH
Q 003056 233 DFDE 236 (852)
Q Consensus 233 ~~D~ 236 (852)
.+.+
T Consensus 174 rl~e 177 (508)
T 3hi0_A 174 RLSE 177 (508)
T ss_dssp HHHH
T ss_pred ehhh
Confidence 7765
No 88
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=81.98 E-value=0.84 Score=39.35 Aligned_cols=21 Identities=29% Similarity=0.384 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 003056 1 MSVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~~ 21 (852)
|.++|||||+..+.||+.+..
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 789999999999999997653
No 89
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=81.94 E-value=2.2 Score=49.73 Aligned_cols=68 Identities=13% Similarity=0.133 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003056 706 SVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 785 (852)
Q Consensus 706 ~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 785 (852)
++...+...+..++..+... -..+++++++.+.+.+++++.||+. + ...+++.++++|+..+
T Consensus 534 ~~~n~~e~~~~~~~~~l~~~---~~~~~~~~~~~i~~~~~~~~~~l~~----~-----------~~~~~~~~~~~l~~~~ 595 (605)
T 2kho_A 534 QTRNQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKG----E-----------DKAAIEAKMQELAQVS 595 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHTTS----S-----------CHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh---hccCCHHHHHHHHHHHHHHHHHHhc----C-----------CHHHHHHHHHHHHHHH
Confidence 34444555555555555331 1247899999999999999999972 1 4578999999999999
Q ss_pred hhhhcC
Q 003056 786 RPIMTK 791 (852)
Q Consensus 786 ~~l~~k 791 (852)
.++..+
T Consensus 596 ~~~~~~ 601 (605)
T 2kho_A 596 QKLMEI 601 (605)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 90
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=81.67 E-value=11 Score=38.90 Aligned_cols=121 Identities=13% Similarity=0.109 Sum_probs=0.0
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHH
Q 003056 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v 80 (852)
|.+||||+|.|++++++++.
T Consensus 1 m~~lgidiggt~~~~~l~d~------------------------------------------------------------ 20 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIGA------------------------------------------------------------ 20 (289)
T ss_dssp CCEEEEEECSSEEEEEEECT------------------------------------------------------------
T ss_pred CeEEEEEeCCCEEEEEEECC------------------------------------------------------------
Q ss_pred HHhhccCCceEeeCCCCceEEEEEEcCceeeecHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEcCCCCHHH--------
Q 003056 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQ-------- 152 (852)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~q-------- 152 (852)
+|.+..+........ .++++++..+...+.+.... +..+.|++|...+...
T Consensus 21 ---------------~g~il~~~~~~~~~~-~~~~~~~~~i~~~i~~~~~~-----~~~igi~~pG~vd~~~g~v~~~~~ 79 (289)
T 2aa4_A 21 ---------------DGQIRDRRELPTPAS-QTPEALRDALSALVSPLQAH-----AQRVAIASTGIIRDGSLLALNPHN 79 (289)
T ss_dssp ---------------TCCEEEEEEEECCSS-CCHHHHHHHHHHHHTTTGGG-----CSEEEEEESSEEETTEEECSSGGG
T ss_pred ---------------CCCEEEEEEecCCCC-CCHHHHHHHHHHHHHHHHhh-----CCEEEEEeccceeCCCCEEEeCCC
Q ss_pred ---------HHHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 153 ---------RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 153 ---------R~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
++.+.+.. |++ +.+.|+..|+|++......... . +++++-+|.| +-.+++
T Consensus 80 ~~~w~~~~l~~~l~~~~---~~p-v~v~NDa~aaa~~e~~~g~~~~---~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 80 LGGLLHFPLVKTLEQLT---NLP-TIAINDAQAAAWAEFQALDGDI---T-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp GGGGTTCCHHHHHHHHH---CSC-EEEEEHHHHHHHHHHHTSCTTC---C-CEEEEEESSS-EEEEEE
T ss_pred CCcccCCChHHHHHHHH---CCC-EEEechHHHHHHHHHHhCCCCC---c-eEEEEEeCcc-EEEEEE
No 91
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=81.61 E-value=2.4 Score=49.97 Aligned_cols=75 Identities=20% Similarity=0.151 Sum_probs=54.9
Q ss_pred cchHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHH
Q 003056 703 DRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALD 782 (852)
Q Consensus 703 ~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~ 782 (852)
.|-++...|...+..++..+.. .--..+++++++++...+++++.||.+.- .+ -+..+++.|+++|+
T Consensus 548 ~~~~~~n~le~~i~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~~~wl~~~~--~~---------~~~~~~~~~~~~l~ 614 (675)
T 3d2f_A 548 ETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTKLQGMLNKAEEWLYDEG--FD---------SIKAKYIAKYEELA 614 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--TTGGGSCHHHHHHHHHHHHHHHHHTTTGG--GG---------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHhhCCHHHHHHHHHHHHHHHHHHhcCC--ch---------hhHHHHHHHHHHHH
Confidence 3445566677777788877753 12245899999999999999999996421 11 13568999999999
Q ss_pred HHhhhhhc
Q 003056 783 RFCRPIMT 790 (852)
Q Consensus 783 ~~~~~l~~ 790 (852)
..+.++..
T Consensus 615 ~~~~~i~~ 622 (675)
T 3d2f_A 615 SLGNIIRG 622 (675)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988773
No 92
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=80.66 E-value=24 Score=39.50 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHcCCc--ceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee
Q 003056 149 TDLQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK 214 (852)
Q Consensus 149 ~~~qR~al~~Aa~~AGl~--~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~~ 214 (852)
...-.+.|.+|...-|++ ++.++|+.+|++++.++.. +..++.+=+|-|+=-+.+....
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-------~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-------PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEEGG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-------CCcEEEEEEecCcceEEEeecc
Confidence 455677888999888886 4789999999999876542 3566666688887665555543
No 93
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=79.79 E-value=43 Score=33.88 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=29.5
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++......... ....++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~--~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAG--VKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTT--CCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCC--CCCcEEEEEECcc-eEEEEE
Confidence 4776 6899999999998654332110 1235778888887 566654
No 94
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=79.42 E-value=14 Score=38.53 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 153 RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 153 R~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
++.+.+. .|++ +.+.|+..|+|++-....... ..++++++-+|.| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~~---~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEAX---GLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCc-eEEEEE
Confidence 3444443 4776 589999999998765543211 2467888888876 445554
No 95
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=79.38 E-value=5.5 Score=46.26 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHhhhh
Q 003056 709 DQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFCRPI 788 (852)
Q Consensus 709 ~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~l 788 (852)
..+...+..++..+... -..+++++++++.+.+++++.||+.. ...+|+.++++|+..+.++
T Consensus 537 n~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~l~~~~~~~ 598 (605)
T 4b9q_A 537 NQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQKL 598 (605)
T ss_dssp HHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhh---hhhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHH
Confidence 34444455555444321 12478999999999999999999732 1578999999999999998
Q ss_pred hcCC
Q 003056 789 MTKP 792 (852)
Q Consensus 789 ~~kp 792 (852)
..|.
T Consensus 599 ~~~~ 602 (605)
T 4b9q_A 599 MEIA 602 (605)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8653
No 96
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=76.86 E-value=2.9 Score=44.97 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=27.7
Q ss_pred CCcceeeechhHHHHHHh-----hhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 164 GLHPLRLFHETTATALAY-----GIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 164 Gl~~~~li~Ep~AAAl~y-----~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
|+. +++|+-..=|.+.| .+.. +.......++|+|+|||+|.+++.
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~--~~~~~~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDT--LKSVQNKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTC--SSSCCSSCEEEEEECSSEEEEEEE
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhh--ccccccccEEEEEeCCCceEEEEe
Confidence 443 46666555444444 2211 111123579999999999999987
No 97
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=76.60 E-value=9.1 Score=42.60 Aligned_cols=56 Identities=11% Similarity=-0.055 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHcCCc--ceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEe
Q 003056 151 LQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (852)
Q Consensus 151 ~qR~al~~Aa~~AGl~--~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~ 213 (852)
.-++.|.++...-|++ ++.++|+..|++++-.. + ...+++.+=+|-|+=-.-+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~-~------~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNY-T------DAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHH-H------CTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhh-c------CCccEEEEEECcEEEEEEEECC
Confidence 4566777777655665 58999999999998765 2 1456777778888765555554
No 98
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=76.18 E-value=36 Score=35.97 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=29.7
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++........ ....++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGK---GLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCC-EEEEEE
Confidence 4776 579999999998764432211 2457888889987 445554
No 99
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=74.34 E-value=1.6 Score=40.85 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=18.4
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 003056 1 MSVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~~ 21 (852)
|.+||||+|+..|.+|+.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 679999999999999998653
No 100
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=73.42 E-value=32 Score=37.74 Aligned_cols=44 Identities=30% Similarity=0.348 Sum_probs=30.1
Q ss_pred cCCcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 003056 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (852)
Q Consensus 163 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv 211 (852)
.|++ +.+.|+..|+|++........ ....++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQ---DVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCc-EEEEEE
Confidence 4776 579999999998764432211 2467888889987 445554
No 101
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=71.30 E-value=14 Score=41.75 Aligned_cols=44 Identities=9% Similarity=-0.017 Sum_probs=32.6
Q ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHcCCcceeee-chhHHHHHHh
Q 003056 138 VDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLF-HETTATALAY 181 (852)
Q Consensus 138 ~~~VitVP~~f~~~qR~al~~Aa~~AGl~~~~li-~Ep~AAAl~y 181 (852)
..++.-+|..++...-.++.+++...|+++...| .--.++.+..
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~n 175 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNN 175 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHT
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEcc
Confidence 3455559999999999999999999999977654 3334444443
No 102
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=68.65 E-value=8.9 Score=45.65 Aligned_cols=65 Identities=18% Similarity=0.176 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc---CCCCcccC---CchhHHHhhHHHhhhhhc
Q 003056 312 ERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAILS 381 (852)
Q Consensus 312 ~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f---g~~v~~~~---n~deava~GAa~~aa~ls 381 (852)
+-+...+.++.+..+ ++.|+|.||......+++.|.+.+ |.++..+. -.|..+|+|.|++|+...
T Consensus 691 ~~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 691 RAFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 334445555555544 567999999999999999999887 44444432 248899999998886543
No 103
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=64.62 E-value=22 Score=40.04 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=35.2
Q ss_pred CcCcEEEEEcCCCCHHHHHHHHHHHHHcCCcceeee-chhHHHHHHh
Q 003056 136 AVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLF-HETTATALAY 181 (852)
Q Consensus 136 ~~~~~VitVP~~f~~~qR~al~~Aa~~AGl~~~~li-~Ep~AAAl~y 181 (852)
+-..+++.||..|+..+-.++.+++...|+++...| .--.++.++.
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~i~~~i~q~dd~vli~n 173 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQITGVILQRDDGVLVSN 173 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCEEEEEEESSSCHHHHHH
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCcEEEEEEecCCEEEEcc
Confidence 445689999999999999999999999999876544 3334444443
No 104
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=62.72 E-value=35 Score=33.34 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003056 736 EKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 785 (852)
Q Consensus 736 e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 785 (852)
.+..+...+.+...|++++...-..... -++.-.+.-+..|.+.|...+
T Consensus 106 ~L~~f~~~~~~~~~Wl~eke~~~~s~d~-g~~~~~v~~l~~k~~~f~~el 154 (210)
T 3pdy_A 106 SLHSFVAAATKELMWLNEKEEEEVGFDW-SDRNTNMTAKKESYSALMREL 154 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-STTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccc-CCCchhHHHHHHHHHHHHHHH
Confidence 5678888899999999998876655332 334445555555555544443
No 105
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=61.69 E-value=7.4 Score=36.54 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=17.5
Q ss_pred CeEEEEEcCccceEEEEEE
Q 003056 1 MSVVGFDLGNESCIVAVAR 19 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~ 19 (852)
|-|||||-|++++..++..
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999875
No 106
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=61.36 E-value=13 Score=43.06 Aligned_cols=65 Identities=8% Similarity=0.064 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc-CCCCc---ccCCchhHHHhhHHHhhhh
Q 003056 310 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPR---RTMNASECVARGCALQCAI 379 (852)
Q Consensus 310 ~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f-g~~v~---~~~n~deava~GAa~~aa~ 379 (852)
+++.+...+.++.+..+ ++.|+|+||.+...++++.|.+.+ |.++. ...-.|.++++|.|+.|+.
T Consensus 583 la~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33444444455555443 578999999999999999999988 54432 2334689999999998864
No 107
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=60.51 E-value=13 Score=41.32 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=17.2
Q ss_pred CceEEEEEeCCceeEEEEEE
Q 003056 193 QLNVAFVDIGHASLQVCIAG 212 (852)
Q Consensus 193 ~~~vlv~D~GggT~dvsiv~ 212 (852)
...++|+|||||+|.+++..
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 35689999999999999874
No 108
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=60.14 E-value=15 Score=39.32 Aligned_cols=69 Identities=22% Similarity=0.192 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcC-CCC------cccCCchhHHHhhHHHhhh
Q 003056 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEP------RRTMNASECVARGCALQCA 378 (852)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg-~~v------~~~~n~deava~GAa~~aa 378 (852)
+..-+..-+...|-+.++... ..++.|+++||+++.|.+.++|++.++ ..+ ..+.+.-||+ .-|++|.
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~--aFA~LA~ 335 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGM--AFAWLAH 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHH--HHHHHHH
Confidence 344444444455555555433 136789999999999999999999985 332 2223444554 4555554
Q ss_pred h
Q 003056 379 I 379 (852)
Q Consensus 379 ~ 379 (852)
.
T Consensus 336 ~ 336 (371)
T 3qbx_A 336 R 336 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 109
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=58.12 E-value=7.1 Score=35.76 Aligned_cols=21 Identities=33% Similarity=0.528 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 003056 2 SVVGFDLGNESCIVAVARQRG 22 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~ 22 (852)
.++|||||+..+.||+.++.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 489999999999999988643
No 110
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=57.70 E-value=17 Score=39.07 Aligned_cols=68 Identities=12% Similarity=0.110 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcC-CCC------cccCCchhHHHhhHHHhh
Q 003056 305 QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEP------RRTMNASECVARGCALQC 377 (852)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg-~~v------~~~~n~deava~GAa~~a 377 (852)
++..-+..-+...|-+.+.... ..+.|+++||+++.|.+.++|++.++ .++ ..+.+.-||+|. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 4444555555556666665542 35689999999999999999999994 233 223455566655 4555
Q ss_pred h
Q 003056 378 A 378 (852)
Q Consensus 378 a 378 (852)
.
T Consensus 341 ~ 341 (370)
T 3cqy_A 341 M 341 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 111
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=55.45 E-value=7.7 Score=36.74 Aligned_cols=20 Identities=30% Similarity=0.302 Sum_probs=17.9
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 003056 1 MSVVGFDLGNESCIVAVARQ 20 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~ 20 (852)
|-|+|||.|++++..+++..
T Consensus 1 MrILGIDPGl~~tG~gvi~~ 20 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAV 20 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEEe
Confidence 88999999999999998753
No 112
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=55.10 E-value=30 Score=35.50 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhh---hhhcC---CCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccc
Q 003056 619 VMEETKDRKNAVEAYVYDMRNKLCD---KYQDF---VTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGD 692 (852)
Q Consensus 619 ~~~~~~~akN~LEs~iy~~r~~L~~---~~~~~---~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~ 692 (852)
.....++.++.|..|.-++|.++.. ++... ..++-|.++...++++..-|.-- .+.-...+..++.+|+....
T Consensus 64 ~~~~~eelr~kL~p~~~el~~~l~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py-~eelr~k~~~~leeLr~~l~ 142 (273)
T 3s84_A 64 VNTQAEQLRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPY-ADEFKVKIDQTVEELRRSLA 142 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHG
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhH-HHHHHHHHHHHHHHHHHHhh
Confidence 3445566666677776666666642 22211 22344444555455554444211 00112334455566666666
Q ss_pred hHHHH
Q 003056 693 PIEER 697 (852)
Q Consensus 693 pi~~R 697 (852)
|....
T Consensus 143 P~ae~ 147 (273)
T 3s84_A 143 PYAQD 147 (273)
T ss_dssp GGCSS
T ss_pred hHHHH
Confidence 65433
No 113
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=55.03 E-value=6.9 Score=40.20 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=18.2
Q ss_pred EEEEEcCccceEEEEEECCc
Q 003056 3 VVGFDLGNESCIVAVARQRG 22 (852)
Q Consensus 3 viGID~GTt~s~va~~~~~~ 22 (852)
+++||+|+|+++.|+++++.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECCCeEEEEEEECCE
Confidence 89999999999999998763
No 114
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=53.50 E-value=1e+02 Score=32.85 Aligned_cols=113 Identities=17% Similarity=0.193 Sum_probs=0.0
Q ss_pred EEEEEcCccceEEEEEECCceEEEeCCCCCccceEEEEEcCCceeecHhhHhhhhcCCcchHHHHHHhhCCCCCCHHHHH
Q 003056 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (852)
Q Consensus 3 viGID~GTt~s~va~~~~~~~~iv~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~v~~ 82 (852)
+||||+|.|++++++++ .+
T Consensus 11 ~lgiDIGgt~i~~~l~d-~G------------------------------------------------------------ 29 (366)
T 3mcp_A 11 VMTLDAGGTNFVFSAIQ-GG------------------------------------------------------------ 29 (366)
T ss_dssp EEEEECSSSEEEEEEEE-TT------------------------------------------------------------
T ss_pred EEEEEECcceEEEEEEE-CC------------------------------------------------------------
Q ss_pred hhccCCceEeeCCCCceEEEEEEcCce-eeecHHHHHHHHHHHHHH---HHHHhcCCCcCcEEEEEcC------------
Q 003056 83 DLKSLPFAVTEGPDGYPLIHARYLGET-RVFTPTQVLGMLLSNLKA---IAESNLNAAVVDCCIGIPV------------ 146 (852)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~eel~a~~L~~l~~---~a~~~~~~~~~~~VitVP~------------ 146 (852)
...... ..-++..-...++..+.+ .....+...+..+.|++|.
T Consensus 30 ---------------------~il~~~~~~~~~~~~~~~~l~~i~~~~~~i~~~~~~~i~gIGIavPG~Vd~~~G~i~~~ 88 (366)
T 3mcp_A 30 ---------------------KEIADPVVLPACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIGDL 88 (366)
T ss_dssp ---------------------EECSCCEEEECCTTCHHHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETTTTEECCC
T ss_pred ---------------------EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhhcCCeEEEEEecceEeCCCCEEEeC
Q ss_pred ----CCC--HHHHHHHHHHHHHcCCcceeeechhHHHHHHhhhhc-------------CCCCCCCCceEEEEEeCCc
Q 003056 147 ----YFT--DLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYK-------------TDLPENDQLNVAFVDIGHA 204 (852)
Q Consensus 147 ----~f~--~~qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~-------------~~~~~~~~~~vlv~D~Ggg 204 (852)
.|. -.-+..+.+.. |++ +.+.|+..|+|++-.... .... .++++++-+|.|
T Consensus 89 ~nlp~w~~~~~l~~~L~~~~---g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~---~~~~v~l~lGtG 158 (366)
T 3mcp_A 89 PNFPSFRGGVALGPFLEDIF---GIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKR---YKNLLGVTLGTG 158 (366)
T ss_dssp TTCGGGTTCBCHHHHHHHHH---CSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCC---CCEEEEEEESSS
T ss_pred CCcccccCCCCHHHHHHHHH---CCC-EEEechhhHHHHHHHHhCCCcccccccccccccCC---CCcEEEEEECCc
No 115
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=53.48 E-value=96 Score=34.08 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHcC---CcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEe
Q 003056 149 TDLQRRAVIDAATIAG---LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (852)
Q Consensus 149 ~~~qR~al~~Aa~~AG---l~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~ 213 (852)
...-.+.|.+|...-| ++++.++|+.+|+.++.+... +...+-+=+|-|+=-+.+.+.
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-------~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-------PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-------CCceEEEEEeCCceEEEEEec
Confidence 3445677888887653 568999999999998765421 345555557877654444333
No 116
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=53.01 E-value=16 Score=43.20 Aligned_cols=65 Identities=18% Similarity=0.139 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhc---CCCCcc---cCCchhHHHhhHHHhhhhh
Q 003056 311 LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRR---TMNASECVARGCALQCAIL 380 (852)
Q Consensus 311 ~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~f---g~~v~~---~~n~deava~GAa~~aa~l 380 (852)
++.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++.. ..-.|.++|+|.|+.|+..
T Consensus 678 a~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~ 748 (761)
T 3vth_A 678 VNFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKI 748 (761)
T ss_dssp HHHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHH
Confidence 3334444455555544 568999999999999999999887 444332 2235899999999988654
No 117
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=52.97 E-value=7.7 Score=43.88 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCcceEEEEECCC
Confidence 48999999999999998754
No 118
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=51.22 E-value=8.9 Score=43.38 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=17.6
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 5 ~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEecCCceEEEEEcCC
Confidence 48999999999999998754
No 119
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=50.99 E-value=7.2 Score=44.01 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 48999999999999998643
No 120
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=49.36 E-value=8.9 Score=43.61 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=17.0
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 5 YvlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEccccceeeeEEcCC
Confidence 38999999999999987643
No 121
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=48.14 E-value=9.3 Score=43.22 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.6
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEcCCCceEEEEECCC
Confidence 48999999999999998753
No 122
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=48.09 E-value=11 Score=43.02 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=17.7
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECcccEEEEEECCC
Confidence 58999999999999998744
No 123
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=47.64 E-value=11 Score=42.74 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 4 ~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEcCCcceEEEEECCC
Confidence 58999999999999998643
No 124
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=47.56 E-value=11 Score=42.51 Aligned_cols=21 Identities=33% Similarity=0.620 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 003056 2 SVVGFDLGNESCIVAVARQRG 22 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~ 22 (852)
.+||||+|||++++++++..+
T Consensus 8 ~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEecCcceEEEEECCCC
Confidence 489999999999999987543
No 125
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=47.15 E-value=9.8 Score=42.98 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 7 ~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCccceEEEEEcCC
Confidence 48999999999999998743
No 126
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=46.65 E-value=18 Score=38.17 Aligned_cols=40 Identities=15% Similarity=0.001 Sum_probs=26.5
Q ss_pred cceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEE
Q 003056 166 HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (852)
Q Consensus 166 ~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~ 212 (852)
.+-....-|.|.|...+.. . ....|++||||.|||+..+.
T Consensus 106 p~~~aaanw~ASa~~~A~~-~------~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 106 NMKVSASNWCGTAKWVSKN-I------EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GGGTBCCSSHHHHHHHHHH-T------CSSEEEEEECSSCEEEEEEE
T ss_pred HHHHHhcCHHHHHHHHHHh-c------CCCEEEEEcCcchhhhhhhc
Confidence 3444556676767633332 1 13589999999999998875
No 127
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=46.12 E-value=12 Score=42.73 Aligned_cols=20 Identities=15% Similarity=0.386 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||.+++++++..
T Consensus 11 ~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEEcCcCEEEEEECCC
Confidence 48999999999999998753
No 128
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=45.66 E-value=11 Score=42.61 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCchhEEEEECCC
Confidence 58999999999999998643
No 129
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=45.60 E-value=11 Score=42.64 Aligned_cols=18 Identities=39% Similarity=0.597 Sum_probs=16.9
Q ss_pred eEEEEEcCccceEEEEEE
Q 003056 2 SVVGFDLGNESCIVAVAR 19 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~ 19 (852)
.+||||+|||++++++++
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeccccEEEEEEE
Confidence 489999999999999998
No 130
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=45.10 E-value=8.7 Score=43.19 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=16.9
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 58999999999999998743
No 131
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=44.97 E-value=42 Score=37.10 Aligned_cols=127 Identities=8% Similarity=0.088 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhh--------c-CCC-ccHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHHHHHHHHHhcCCC
Q 003056 658 TSKLQETEDWLYE--------D-GED-ETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCINSYREAALSSDP 727 (852)
Q Consensus 658 ~~~l~e~~~WL~~--------d-g~~-a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~ 727 (852)
...++++..||.+ + |.+ ++.+.+.+|.+.|..-+.....++.........-..+...-..+..+......
T Consensus 8 ~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L~~~a~~ 87 (450)
T 3r6n_A 8 KHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFE 87 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHhhh
Q 003056 728 KFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFCRP 787 (852)
Q Consensus 728 ~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~ 787 (852)
...++. .+-.+...+.+...|++++...-....-.+++. .+.-+..|.+.|+.++..
T Consensus 88 Rr~~Le--~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~-dv~~l~~khq~l~~EL~~ 144 (450)
T 3r6n_A 88 RMDHLR--QLQNIIQATSREIMWINDCEEEELLYDWSDKNT-NIAQKQEAFSIRMSQLEV 144 (450)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCC-CTTHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccccCcChh-hHHHHHHHHHHHHHHHHH
No 132
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=44.94 E-value=12 Score=42.34 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=17.6
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 68999999999999998643
No 133
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=44.75 E-value=31 Score=38.14 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=26.4
Q ss_pred ceeeechhHHHHH-----HhhhhcCCCCCCCCceEEEEEeCCceeEEEEEE
Q 003056 167 PLRLFHETTATAL-----AYGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (852)
Q Consensus 167 ~~~li~Ep~AAAl-----~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~ 212 (852)
.+++|+-..=+.+ +|.+.. +.......+.++|||||+|+++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~--l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR--FKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT--TC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc--ccCCCCCceEEEecCCCceEEEecc
Confidence 3677765544443 343322 1111235688999999999998764
No 134
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=44.19 E-value=12 Score=43.01 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEEC
Q 003056 2 SVVGFDLGNESCIVAVARQ 20 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~ 20 (852)
.+||||+|||++++++++.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 5899999999999999874
No 135
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=43.54 E-value=10 Score=42.52 Aligned_cols=19 Identities=42% Similarity=0.489 Sum_probs=16.8
Q ss_pred eEEEEEcCccceEEEEEEC
Q 003056 2 SVVGFDLGNESCIVAVARQ 20 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~ 20 (852)
.+||||+|||++++++++.
T Consensus 5 ~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEEECSSEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEEe
Confidence 4899999999999998863
No 136
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=42.01 E-value=15 Score=41.70 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 48999999999999998743
No 137
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=41.97 E-value=28 Score=36.33 Aligned_cols=50 Identities=12% Similarity=0.188 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
+.......+...|+++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 334455677889999999999999999999999998765 45678888753
No 138
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=41.81 E-value=12 Score=41.94 Aligned_cols=19 Identities=26% Similarity=0.538 Sum_probs=16.6
Q ss_pred EEEEEcCccceEEEEEECC
Q 003056 3 VVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 3 viGID~GTt~s~va~~~~~ 21 (852)
+||||+|||++++++++..
T Consensus 2 ~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCcccEEEEECCC
Confidence 6999999999999998643
No 139
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=41.44 E-value=1.7e+02 Score=26.48 Aligned_cols=32 Identities=9% Similarity=-0.016 Sum_probs=22.1
Q ss_pred ccHHHHHHHHHHHHhccchHHHHHHhhhcchH
Q 003056 675 ETKGVYVAKLEELKKQGDPIEERYKEFTDRSS 706 (852)
Q Consensus 675 a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~ 706 (852)
.+.+.+.+++..|......+..+..+...+=+
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le 43 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLE 43 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788888888888887777766655444
No 140
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=40.23 E-value=60 Score=36.21 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=24.2
Q ss_pred CceEEEEEeCCceeEEEEEEeeCC-eEEEEE
Q 003056 193 QLNVAFVDIGHASLQVCIAGFKKG-QLKILG 222 (852)
Q Consensus 193 ~~~vlv~D~GggT~dvsiv~~~~~-~~~vl~ 222 (852)
...+|.+|+||.++-+++|++.++ .+++..
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~ 109 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTTQ 109 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEEE
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEEE
Confidence 457999999999999999999864 455443
No 141
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=40.10 E-value=66 Score=35.69 Aligned_cols=51 Identities=18% Similarity=0.315 Sum_probs=33.5
Q ss_pred CceEEEEEeCCceeEEEEEEeeCC-----eEEEEEEeCCCC----cccHHHHHHHHHHHHHHH
Q 003056 193 QLNVAFVDIGHASLQVCIAGFKKG-----QLKILGHSFDRS----VGGRDFDEVLFQHFAAKF 246 (852)
Q Consensus 193 ~~~vlv~D~GggT~dvsiv~~~~~-----~~~vl~~~~d~~----lGG~~~D~~l~~~l~~~~ 246 (852)
...+|.+|+||.++-|++|++.++ .+++....+... .|. ...|++|+.+.+
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~gt---~~eLFd~IA~~i 135 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGT---AEMLFDYISECI 135 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSSB---HHHHHHHHHHHH
T ss_pred ceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccCC---HHHHHHHHHHHH
Confidence 457999999999999999999865 355554443222 221 255666666543
No 142
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=39.76 E-value=1.6e+02 Score=30.28 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003056 737 KQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 785 (852)
Q Consensus 737 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 785 (852)
+..+...+.++..|+.++...-...+. -+.+-.+..+..+.+.+.+.+
T Consensus 112 l~~f~~~~~~l~~Wl~~~e~~l~~~~~-g~d~~~v~~l~~~~~~f~~el 159 (326)
T 3kbt_A 112 LFQLKRETDDLEQWISEKELVASSPEM-GQDFDHVTLLRDKFRDFARET 159 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCC-CSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccC-CCCHHHHHHHHHHHHHHHHHH
Confidence 445566778888888886664443222 222333444444554444443
No 143
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=39.67 E-value=1.1e+02 Score=33.14 Aligned_cols=45 Identities=16% Similarity=0.286 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHhhcC
Q 003056 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (852)
Q Consensus 308 ~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~s-riP~v~~~l~~~fg 356 (852)
+-++.|+.+-|-..... ...+|.|+++||-+ +.+.|++.+.+.++
T Consensus 311 d~f~yri~k~IGa~aa~----LggvDaIVFTgGIGEns~~vR~~i~~~l~ 356 (415)
T 2e1z_A 311 KTFVHRIARHIAGHAAS----LHRLDGIIFTGGIGENSVLIRQLVIEHLG 356 (415)
T ss_dssp HHHHHHHHHHHHHHHTT----CSSCCEEEEEHHHHHHCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHH----hCCCCEEEECccccccCHHHHHHHHhhHh
Confidence 33444555444443322 24699999999999 99999999998763
No 144
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=39.54 E-value=14 Score=41.74 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|||++++++++..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 47999999999999998643
No 145
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=39.36 E-value=2.4e+02 Score=26.91 Aligned_cols=49 Identities=20% Similarity=0.377 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHhh
Q 003056 737 KQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFCR 786 (852)
Q Consensus 737 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~ 786 (852)
+..+...++++..|+.++... .....+-+-+-.+..+..|.+.|+..+.
T Consensus 111 l~qf~~~~~~~~~Wl~e~e~~-~~~~~~g~dl~~v~~ll~kh~~~~~el~ 159 (216)
T 1u5p_A 111 LHQFFRDMDDEESWIKEKKLL-VSSEDYGRDLTGVQNLRKKHKRLEAELA 159 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHH-hcCcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 344666688888888887653 3333333334444455555555544443
No 146
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=38.01 E-value=1.1e+02 Score=31.21 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=60.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHhHHHhh---hhhhcCC---CHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHh
Q 003056 616 QDRVMEETKDRKNAVEAYVYDMRNKLC---DKYQDFV---TDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKK 689 (852)
Q Consensus 616 ~D~~~~~~~~akN~LEs~iy~~r~~L~---~~~~~~~---~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~ 689 (852)
.++.....++.+..|..|.-++|.+|. +++...+ .++-|..+...+.++.+-|.--.++ -...+..++..|+.
T Consensus 83 ~~~l~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py~eelr~k~~~~leeLr~~l~P~ae~-~~~kl~~~~e~L~~ 161 (273)
T 3s84_A 83 ERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQD-TQEKLNHQLEGLTF 161 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSS-CHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHH
Confidence 455666778899999999999999986 3343332 4567889999999999988654333 23334445444433
Q ss_pred ccchHHHHHHhhhcc-hHHHHHHHHHHHHHHHH
Q 003056 690 QGDPIEERYKEFTDR-SSVIDQLAYCINSYREA 721 (852)
Q Consensus 690 ~~~pi~~R~~e~~~r-p~a~~~l~~~l~~~~~~ 721 (852)
. +...+.+...+ ...++.|+..|.-+-..
T Consensus 162 q---l~~~a~~L~~~l~~~~eeLr~~L~p~ae~ 191 (273)
T 3s84_A 162 Q---MKKNAEELKARISASAEELRQRLAPLAED 191 (273)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222332222 22355556555544333
No 147
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=37.61 E-value=45 Score=37.98 Aligned_cols=78 Identities=15% Similarity=0.050 Sum_probs=52.0
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCC-CCcc-cCCchhHHHhhHHHh
Q 003056 300 RDEFEQISAP-ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK-EPRR-TMNASECVARGCALQ 376 (852)
Q Consensus 300 r~efe~l~~~-~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~-~v~~-~~n~deava~GAa~~ 376 (852)
+.++-..++. +.+-+...+.++++..+ ++.|.|.||.+....+++.|.+..+. .+.. ..-.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 3444433333 33334455555555554 57899999999999999999877553 2222 235689999999999
Q ss_pred hhhhcC
Q 003056 377 CAILSP 382 (852)
Q Consensus 377 aa~ls~ 382 (852)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 876643
No 148
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=37.57 E-value=1e+02 Score=33.99 Aligned_cols=52 Identities=13% Similarity=-0.025 Sum_probs=33.4
Q ss_pred CceEEEEEeCCceeEEEEEEeeCCe---EEEEEEeCCCCc---ccHHHHHHHHHHHHH
Q 003056 193 QLNVAFVDIGHASLQVCIAGFKKGQ---LKILGHSFDRSV---GGRDFDEVLFQHFAA 244 (852)
Q Consensus 193 ~~~vlv~D~GggT~dvsiv~~~~~~---~~vl~~~~d~~l---GG~~~D~~l~~~l~~ 244 (852)
...++.+|+||.++-+.++...+.. +......-...+ +|..+=..|++.+.+
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 5668999999999999999998764 222222222232 566665555555543
No 149
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=37.25 E-value=45 Score=32.80 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 003056 736 EKQKVLNECADAEAWVREKKQQQDA 760 (852)
Q Consensus 736 e~~~v~~~~~~~~~Wl~~~~~~q~~ 760 (852)
.+..+...+++...|++++...-..
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~s 145 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEVA 145 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6777888888889999988876443
No 150
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=36.92 E-value=1.6e+02 Score=32.54 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHHHHcC---CcceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEe
Q 003056 149 TDLQRRAVIDAATIAG---LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (852)
Q Consensus 149 ~~~qR~al~~Aa~~AG---l~~~~li~Ep~AAAl~y~~~~~~~~~~~~~~vlv~D~GggT~dvsiv~~ 213 (852)
...-.+.|++|++.-| ++++.|+|+.+|..++.+... +...+-+=+|-||=-+.+-+.
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-------~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-------CCceEEEEEecCCceEEeeec
Confidence 3455678888988877 458899999999988765432 345555557888764444343
No 151
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=36.81 E-value=19 Score=37.17 Aligned_cols=68 Identities=4% Similarity=-0.129 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCCh--HHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhhh
Q 003056 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRV--PAIIKILTEFFGKEPRRTMNASECVARGCALQCAI 379 (852)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sri--P~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa~ 379 (852)
.+..++++....+-..+ ...+ ..+.+.|+|.||.++. +.+++.+++.. .++ ..+..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 34455555555555555 2221 1156789999998776 66666666543 122 22557788899988754
No 152
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=35.90 E-value=36 Score=35.53 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 308 ~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
.-....+...++++|+++++++++|+.|++-|+++++ -+.+.+.||.+
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 3445677788999999999999999999999988665 34677888743
No 153
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=35.89 E-value=71 Score=27.37 Aligned_cols=25 Identities=4% Similarity=0.125 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 003056 736 EKQKVLNECADAEAWVREKKQQQDA 760 (852)
Q Consensus 736 e~~~v~~~~~~~~~Wl~~~~~~q~~ 760 (852)
++....+.++++..||.++......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566677777778888766554443
No 154
>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}
Probab=35.42 E-value=2.2e+02 Score=24.74 Aligned_cols=99 Identities=15% Similarity=0.038 Sum_probs=69.7
Q ss_pred CHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHhh--hcchHHHHHHHHHHHHHHHHHhcCCC
Q 003056 650 TDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEF--TDRSSVIDQLAYCINSYREAALSSDP 727 (852)
Q Consensus 650 ~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e~--~~rp~a~~~l~~~l~~~~~~~~~~~~ 727 (852)
+.+-.+.-.+.++.+++-|..+..+....+ -..+++..++....||.-. -..-.....++.+||..--...+..
T Consensus 9 ~~~Y~~dT~~Vv~~lr~~l~l~~d~~~~~~---a~~~ar~~ind~vsrYRr~~~v~g~~Sfttm~tAlNaLAGHY~s~g- 84 (113)
T 2y6x_A 9 TGNFREDTLALISSLREAIALPENDPNKKA---AQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLAGHYSSYP- 84 (113)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSCTTCTTHHH---HHHHHHHHHHHHHHHHTTCHHHHTSHHHHHHHHHHHHHHHHHHHCT-
T ss_pred CccHHHHHHHHHHHHHHHHcCCCCCccHHH---HHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcC-
Confidence 334445556677777777776555555544 4467777888888887633 3455566778888887776666544
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 003056 728 KFDHIDIAEKQKVLNECADAEAWVRE 753 (852)
Q Consensus 728 ~~~~~~~~e~~~v~~~~~~~~~Wl~~ 753 (852)
...++++-++.|..+++.++.-|..
T Consensus 85 -~~PlPek~k~Rl~~el~~AE~al~R 109 (113)
T 2y6x_A 85 -NRPLPEKLKARLEQEFKQVELALDR 109 (113)
T ss_dssp -TSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4569999999999999999888754
No 155
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=34.41 E-value=60 Score=28.19 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=53.0
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hhcCCCCCCCcccHHH
Q 003056 698 YKEFTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQ----QDALPKYAAPVLLLGD 773 (852)
Q Consensus 698 ~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~----q~~~~~~~dP~~~~~d 773 (852)
+.+..-||..-+.|...|..+..++. ..|+ ..+.++.|...|+.+.+=|.+.+.. +.+...+++--.-..-
T Consensus 25 ~~~~~~r~~Lee~LE~Iisgaa~~aD---S~~T--r~e~RerIv~eCnavRqaLQdLlseym~~~g~ke~se~L~~aI~k 99 (111)
T 4ehp_B 25 FSEERFRPSLEERLESIISGAALMAD---SSCT--RDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDK 99 (111)
T ss_dssp HHHHSSSCCHHHHHHHHHHHHTCSCC---CCSG--GGHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCCCCCHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHh---hhcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 36677788888888888887765553 3443 3578999999999887776666555 5555555544444444
Q ss_pred HHHHHHHHHH
Q 003056 774 VRRKAEALDR 783 (852)
Q Consensus 774 i~~k~~~l~~ 783 (852)
+-.|.++|.+
T Consensus 100 m~~kt~dLrR 109 (111)
T 4ehp_B 100 MTKKTRDLRR 109 (111)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4555555543
No 156
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=34.31 E-value=2.1e+02 Score=26.74 Aligned_cols=48 Identities=15% Similarity=0.231 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003056 737 KQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 785 (852)
Q Consensus 737 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 785 (852)
+..+...++.+..||......-... ..-+.+-.+..+..+.+.++..+
T Consensus 112 l~~F~~d~~~~~~Wl~~~e~~L~~~-~~g~sl~~ve~LlkkH~~fe~~l 159 (185)
T 3lbx_B 112 VCQFSRDASVAEAWLIAQEPYLASG-DFGHTVDSVEKLIKRHEAFEKST 159 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhHhhhccC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 4456677888999998765544432 22233334445555555555444
No 157
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=34.24 E-value=38 Score=35.05 Aligned_cols=47 Identities=19% Similarity=0.280 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 309 ~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
.....+...++++|+++++++++|+.|++-|+++++ -+.+.+.||..
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 345567788999999999999999999999998765 34577788743
No 158
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=34.23 E-value=81 Score=25.11 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=34.7
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHhHHHhhhhhhcCCC
Q 003056 606 AVEKEFEMALQDRVMEETKDRKNAVEAYVYDMRNKLCDKYQDFVT 650 (852)
Q Consensus 606 ~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~L~~~~~~~~~ 650 (852)
+.++.+++...|...++++......|+-|-.+|..|+ .|..+++
T Consensus 28 L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLD-KfrSVl~ 71 (72)
T 3nmd_A 28 LQEKIEELRQRDALIDELELELDQKDELIQMLQNELD-KYRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCC
Confidence 3456677888888899999999999999999998885 5666554
No 159
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=32.50 E-value=19 Score=37.26 Aligned_cols=66 Identities=9% Similarity=-0.054 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHhhh
Q 003056 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (852)
Q Consensus 309 ~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~aa 378 (852)
.++++....+-..+ ...+ ..+.+.|+|.||.+.. +.+.|++.+..+...-..+..+.++||++++.
T Consensus 212 ~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp HHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 44444444444444 2221 1156678888887765 55556655543111111234677899998764
No 160
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=32.39 E-value=4.2e+02 Score=26.96 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003056 736 EKQKVLNECADAEAWVREKKQQQDAL 761 (852)
Q Consensus 736 e~~~v~~~~~~~~~Wl~~~~~~q~~~ 761 (852)
.+..+...++++..||.++...-...
T Consensus 220 ~~~~F~~~~~~l~~Wl~~~~~~l~~~ 245 (323)
T 3edv_A 220 DKFRFFSMVRDLMLWMEDVIRQIEAQ 245 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35577888999999999887766543
No 161
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=32.21 E-value=1.5e+02 Score=31.73 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHhhc
Q 003056 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFF 355 (852)
Q Consensus 309 ~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~s-riP~v~~~l~~~f 355 (852)
-++.++.+.|-..... + ..+|.|+++||-+ ..+.|++.+.+.+
T Consensus 295 ~f~yri~k~IGa~aa~--L--~gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 295 IFSHRVAKFVASYMIY--F--NKLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp HHHHHHHHHHHHHGGG--C--SSCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH--h--CCCCEEEECCccccCcHHHHHHHHhhc
Confidence 3444444444433222 2 3699999999988 7799999998775
No 162
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=31.97 E-value=26 Score=35.83 Aligned_cols=20 Identities=20% Similarity=0.449 Sum_probs=17.7
Q ss_pred EEEEEcCccceEEEEEECCc
Q 003056 3 VVGFDLGNESCIVAVARQRG 22 (852)
Q Consensus 3 viGID~GTt~s~va~~~~~~ 22 (852)
++.||+|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 58899999999999998664
No 163
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=31.81 E-value=85 Score=26.78 Aligned_cols=24 Identities=4% Similarity=0.208 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 003056 736 EKQKVLNECADAEAWVREKKQQQD 759 (852)
Q Consensus 736 e~~~v~~~~~~~~~Wl~~~~~~q~ 759 (852)
++..+.+.++++..||.++.....
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~ 26 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQ 26 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567788888888888887655433
No 164
>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A
Probab=30.45 E-value=2.7e+02 Score=24.26 Aligned_cols=97 Identities=11% Similarity=0.031 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccchHHHHHHh--hhcchHHHHHHHHHHHHHHHHHhcCCCC
Q 003056 651 DSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE--FTDRSSVIDQLAYCINSYREAALSSDPK 728 (852)
Q Consensus 651 ~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e--~~~rp~a~~~l~~~l~~~~~~~~~~~~~ 728 (852)
.+-.+.-.+.++.+++-|..+..+... .+-..+++..++....||+- .-..-.....++.+||..--...+..
T Consensus 14 ~~Y~~dT~~Vv~~lr~~l~l~~d~~~~---~~a~~~ar~~ind~vsrYRr~~~v~g~~Sf~tm~tAlNaLAGHY~s~g-- 88 (115)
T 2kmf_A 14 GNYSQDTLTVIATLREAIDLPQDAPNR---QEVQDTARGQINDYISRYRRKGDAGGLKSFTTMQTALNSLAGYYTSYG-- 88 (115)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCTTCTTH---HHHHHHHHHHHHHHHHHTHHHHCSSSCHHHHHHHHHHHHHHHHHHHHS--
T ss_pred ccHHHHHHHHHHHHHHHHcCCCCCccH---HHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcC--
Confidence 334455556666666666655445554 45566777778888887763 34555677778888887666655434
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 003056 729 FDHIDIAEKQKVLNECADAEAWVR 752 (852)
Q Consensus 729 ~~~~~~~e~~~v~~~~~~~~~Wl~ 752 (852)
...++++-++.|..+++.++.-|.
T Consensus 89 ~~PlPek~k~Rl~~el~~AE~al~ 112 (115)
T 2kmf_A 89 ARPIPEKLKKRLQLEFTQAERSIE 112 (115)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456999999999999999887764
No 165
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=30.21 E-value=2.1e+02 Score=29.33 Aligned_cols=22 Identities=14% Similarity=0.253 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 003056 736 EKQKVLNECADAEAWVREKKQQ 757 (852)
Q Consensus 736 e~~~v~~~~~~~~~Wl~~~~~~ 757 (852)
++..+...++++..|+.++...
T Consensus 218 ~~~~f~~~~~e~~~Wl~ek~~~ 239 (326)
T 3kbt_A 218 DLHRYFYTGAEILGLIDEKHRE 239 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4566777899999999987654
No 166
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=30.17 E-value=28 Score=35.25 Aligned_cols=21 Identities=14% Similarity=0.302 Sum_probs=17.9
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 003056 2 SVVGFDLGNESCIVAVARQRG 22 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~ 22 (852)
-.++||+|+|+++.|+++++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 368999999999999987553
No 167
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=30.08 E-value=1.3e+02 Score=33.13 Aligned_cols=33 Identities=15% Similarity=0.372 Sum_probs=26.4
Q ss_pred CceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCC
Q 003056 193 QLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFD 226 (852)
Q Consensus 193 ~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d 226 (852)
...+|.+|+||.++-|++|++.++ +++....+.
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ 90 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYS 90 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSS-EEEEEEEEC
T ss_pred eeEEEEEEecCCeEEEEEEEECCc-eEEEEEEec
Confidence 467999999999999999999776 665554444
No 168
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=29.54 E-value=4.1e+02 Score=26.00 Aligned_cols=43 Identities=7% Similarity=0.088 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHH
Q 003056 739 KVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALD 782 (852)
Q Consensus 739 ~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~ 782 (852)
.+...++++..||.++...-.......|+ =.+..+..+.+.+.
T Consensus 133 qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~-e~v~~ll~~h~~~~ 175 (250)
T 1quu_A 133 EFAKRAAPFNNWMEGAMEDLQDMFIVHSI-EEIQSLITAHEQFK 175 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCCCCCST-TTHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHhccccccCCH-HHHHHHHHHHHHHH
Confidence 56677888899998877544333222222 24444444444443
No 169
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=29.29 E-value=34 Score=36.89 Aligned_cols=49 Identities=10% Similarity=0.037 Sum_probs=32.8
Q ss_pred CccEEEEeCCCCChHH-HHHHHHhhcCC----CCcccCCchhHHHhhHHHhhhh
Q 003056 331 DVHMVEVVGSSSRVPA-IIKILTEFFGK----EPRRTMNASECVARGCALQCAI 379 (852)
Q Consensus 331 ~I~~ViLvGG~sriP~-v~~~l~~~fg~----~v~~~~n~deava~GAa~~aa~ 379 (852)
+++.|+|.||.+..+. +.+.|.+.+.. .+......+.+.++||+..+..
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 5789999999886533 66667666642 2333334456999999987643
No 170
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=29.29 E-value=54 Score=34.49 Aligned_cols=47 Identities=23% Similarity=0.281 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 309 ~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
-....+...|+++|+++|+++++|+.|+..|++.++ -+.+.+.||.+
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 345677788999999999999999999999988764 34577778743
No 171
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=29.08 E-value=4.1e+02 Score=27.43 Aligned_cols=135 Identities=7% Similarity=0.016 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhh---hhhhcC---CCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHhccc
Q 003056 619 VMEETKDRKNAVEAYVYDMRNKLC---DKYQDF---VTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGD 692 (852)
Q Consensus 619 ~~~~~~~akN~LEs~iy~~r~~L~---~~~~~~---~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~kl~~L~~~~~ 692 (852)
.....++.|..|+-|.-+++.+|. ++|... ..++-|..+...++++..=|.--+++ -+.-+...+++|+....
T Consensus 112 L~~dlEelR~~L~Py~~el~~~l~~~~eelr~kL~Py~~EL~~~~~~~~eeLr~~L~py~ee-Lr~kl~~~veelr~~L~ 190 (307)
T 2l7b_A 112 LGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAG-AREGAERGLSAIRERLG 190 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CSSHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHhh
Confidence 345678888899999988888885 344322 23456777778888888888544333 34556888999999998
Q ss_pred hHHHHHHhhh-------------cchHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 003056 693 PIEERYKEFT-------------DRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREK 754 (852)
Q Consensus 693 pi~~R~~e~~-------------~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~ 754 (852)
|+...+.... ..-..++.|+..|.-+...+...-+...+.-++=..++...+.++..=+...
T Consensus 191 Py~e~~~~~~~~v~~~k~~~L~~ki~~~~e~Lr~~L~p~~~~~~~~l~~l~~q~ee~~~ql~~~aeel~~kl~~~ 265 (307)
T 2l7b_A 191 PLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAA 265 (307)
T ss_dssp SSCTTTTTHHHHHHHHHCCCCSSCSCCHHHHHHHHHHHHHHTCSCSSCCCCSSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhH
Confidence 8755333321 1223467778887776665544445555545555555665555555544443
No 172
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=28.95 E-value=53 Score=33.95 Aligned_cols=48 Identities=10% Similarity=0.151 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 308 ~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
......+...++++|+++|++++||+.|++-|+++++- +.+.+.||..
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~lg~~ 255 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhCCC
Confidence 33456777889999999999999999999999986543 4567777743
No 173
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=28.91 E-value=58 Score=34.08 Aligned_cols=47 Identities=11% Similarity=0.290 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 309 ~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
-....+...++++|+++|+++++|+.|++-+++.++ -+.+.+.||.+
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 345667788999999999999999999999998765 34577777743
No 174
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=28.86 E-value=1.9e+02 Score=33.25 Aligned_cols=99 Identities=14% Similarity=0.300 Sum_probs=64.8
Q ss_pred CceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCC--CcccHHHHHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHH
Q 003056 193 QLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDR--SVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEK 270 (852)
Q Consensus 193 ~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~--~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek 270 (852)
..+-+-+|+|..|+-+.++....|.+--.....+. .+|.+-+++.-+-. +
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~---------------------------~- 256 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVD---------------------------E- 256 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHH---------------------------H-
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHh---------------------------c-
Confidence 45678999999999999999887754333333232 24554443332110 0
Q ss_pred hhhhcCCCCcccEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHH
Q 003056 271 LKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAI 347 (852)
Q Consensus 271 ~K~~LS~~~~~~i~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v 347 (852)
...-++.+-+-+++.+..+|.+++.++++..++|..+.++|-.+..-.+
T Consensus 257 ----------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLl 305 (631)
T 3zyy_X 257 ----------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLF 305 (631)
T ss_dssp ----------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHH
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHH
Confidence 0011333444566778888899999999999999999999987655444
No 175
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=27.30 E-value=1.3e+02 Score=32.30 Aligned_cols=46 Identities=11% Similarity=0.186 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHhhcC
Q 003056 307 SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (852)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~s-riP~v~~~l~~~fg 356 (852)
++-++.++.+-|-...... ..+|.|+++||-+ +.+.|++.|.+.++
T Consensus 303 ~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 303 YDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHHh
Confidence 3444555555554443332 3689999999988 56889999988763
No 176
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=26.78 E-value=47 Score=27.54 Aligned_cols=28 Identities=21% Similarity=0.213 Sum_probs=25.6
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHcCCcc
Q 003056 140 CCIGIPVYFTDLQRRAVIDAATIAGLHP 167 (852)
Q Consensus 140 ~VitVP~~f~~~qR~al~~Aa~~AGl~~ 167 (852)
-.++.|+.|+..+|..+...|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 5789999999999999999999999853
No 177
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=26.64 E-value=45 Score=35.93 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003056 2 SVVGFDLGNESCIVAVARQR 21 (852)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (852)
.+||||+|.|++++++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 58999999999999998864
No 178
>4adz_A CSOR; transcription, copper sensor; 1.70A {Streptomyces lividans}
Probab=25.13 E-value=3.8e+02 Score=24.09 Aligned_cols=49 Identities=14% Similarity=0.175 Sum_probs=34.6
Q ss_pred CCCccHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHH---HHHHHHHHH
Q 003056 672 GEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQL---AYCINSYRE 720 (852)
Q Consensus 672 g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l---~~~l~~~~~ 720 (852)
|+...+..+..||+.++..+.-|...+.+-..+...+..+ +++|+.+..
T Consensus 46 g~~~~Kk~ll~RLkRIeGQvrGI~rMIEedr~C~DIL~QlaAVrsAL~~v~~ 97 (136)
T 4adz_A 46 GYHKQKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFAL 97 (136)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3445677788888888888888888888888888766554 445554443
No 179
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=23.82 E-value=34 Score=39.48 Aligned_cols=25 Identities=36% Similarity=0.502 Sum_probs=22.9
Q ss_pred ccEEEEeCCCCChHHHHHHHHhhcC
Q 003056 332 VHMVEVVGSSSRVPAIIKILTEFFG 356 (852)
Q Consensus 332 I~~ViLvGG~sriP~v~~~l~~~fg 356 (852)
.+.|++|||++.+|.+.-.|.+.+.
T Consensus 501 y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHH
Confidence 4789999999999999999999885
No 180
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=23.38 E-value=1.7e+02 Score=30.26 Aligned_cols=48 Identities=13% Similarity=0.176 Sum_probs=32.3
Q ss_pred CccEEEEeCCCCCh-----HHHHHHHHhhcCC-------CCcccCCchhHHHhhHHHhhh
Q 003056 331 DVHMVEVVGSSSRV-----PAIIKILTEFFGK-------EPRRTMNASECVARGCALQCA 378 (852)
Q Consensus 331 ~I~~ViLvGG~sri-----P~v~~~l~~~fg~-------~v~~~~n~deava~GAa~~aa 378 (852)
+.+.|+|-||.++. +.+++.+++++.. ++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 45778888887764 5677777776521 122233457899999998774
No 181
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=23.37 E-value=79 Score=32.97 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCC
Q 003056 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK 357 (852)
Q Consensus 309 ~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~ 357 (852)
.....+...++++|+++|++++||+.|++-++++++- +.+.+.||.
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~---~~~~~~lg~ 274 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRIN---ELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHcCC
Confidence 3456777889999999999999999999999887653 346667764
No 182
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=22.95 E-value=3.4e+02 Score=22.77 Aligned_cols=88 Identities=7% Similarity=0.054 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHhhhc--------CCCccHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHHHHHHHHHhcC
Q 003056 654 RELFTSKLQETEDWLYED--------GEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCINSYREAALSS 725 (852)
Q Consensus 654 r~~i~~~l~e~~~WL~~d--------g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~ 725 (852)
...+...++++..||.+- ....+...+...++..+.+..-|..+.. .+ ......+..++..
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~-------~v---~~v~~~g~~L~~~- 72 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQS-------SV---GSVLQAGNQLMTQ- 72 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHh-
Confidence 456778888888888641 1123455556666666555555444311 11 1222223334432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 003056 726 DPKFDHIDIAEKQKVLNECADAEAWVREKKQ 756 (852)
Q Consensus 726 ~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~ 756 (852)
.|.+.++...|...++.+..-|+....
T Consensus 73 ----~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (118)
T 3uul_A 73 ----GTLSDEEEFEIQEQMTLLNARWEALRV 99 (118)
T ss_dssp ----TCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 245667777777777777666655433
No 183
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=22.84 E-value=1.4e+02 Score=28.73 Aligned_cols=134 Identities=16% Similarity=0.193 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhh-------cCCCccHHHHHHHHHHHHhccchHHHHHHhhhcc---------------hHHHHH
Q 003056 653 ERELFTSKLQETEDWLYE-------DGEDETKGVYVAKLEELKKQGDPIEERYKEFTDR---------------SSVIDQ 710 (852)
Q Consensus 653 er~~i~~~l~e~~~WL~~-------dg~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~r---------------p~a~~~ 710 (852)
....|...+.++..||.+ .....+....+..|..-+.+-..|..|...+... |..-..
T Consensus 14 ~~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i~~~ 93 (218)
T 3fb2_A 14 DLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQK 93 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHHHHH
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHhhh
Q 003056 711 LAYCINSYREAALSSDPKFDHIDIA-EKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFCRP 787 (852)
Q Consensus 711 l~~~l~~~~~~~~~~~~~~~~~~~~-e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~ 787 (852)
+...-.....+...+.....++..- ++..+...+.++..||++....-...+ .-+.+-.+..+..+.+.++..+..
T Consensus 94 l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F~~d~~~~~~WL~~~e~~L~~~~-~g~s~~~ve~ll~~h~~f~~~l~~ 170 (218)
T 3fb2_A 94 LDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTED-KGDSLDSVEALIKKHEDFDKAINV 170 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHh
No 184
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=22.73 E-value=4.8e+02 Score=24.46 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHH
Q 003056 737 KQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRF 784 (852)
Q Consensus 737 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~ 784 (852)
+..+...++++..||.++...- ..+.+-+..-.+..+..+.+.+...
T Consensus 108 ~~~f~~~~~e~~~Wl~~~e~~l-~~~~~g~~~~~v~~ll~~h~~~~~e 154 (213)
T 1cun_A 108 YQQFVANVEEEEAWINEKMTLV-ASEDYGDTLAAIQGLLKKHEAFETD 154 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3455666777788887765433 2233333333444444444444443
No 185
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=22.50 E-value=93 Score=32.58 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 307 SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
++..+..+...++++|+++|++.++|+.+++..++.+ +-+.+.+.+|.+
T Consensus 229 ~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~ 277 (333)
T 4dfe_A 229 FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCC
Confidence 3455677778899999999999999999999988865 446777778754
No 186
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=22.21 E-value=2.7e+02 Score=27.72 Aligned_cols=46 Identities=17% Similarity=0.180 Sum_probs=25.1
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCCh
Q 003056 298 IKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRV 344 (852)
Q Consensus 298 itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sri 344 (852)
+-++..+.+-..++.-....|+..+++..-... --.|+++||.+.+
T Consensus 178 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~-~~~vi~TGG~a~~ 223 (249)
T 3bex_A 178 VGKDTEENIRLGVVNGSVYALEGIIGRIKEVYG-DLPVVLTGGQSKI 223 (249)
T ss_dssp SBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEESTTSGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCChHH
Confidence 345555666665555555555554443211101 1259999999865
No 187
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=22.08 E-value=54 Score=33.51 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=17.0
Q ss_pred EEEEEcCccceEEEEEE-CC
Q 003056 3 VVGFDLGNESCIVAVAR-QR 21 (852)
Q Consensus 3 viGID~GTt~s~va~~~-~~ 21 (852)
.+.||+|+|+++.++++ ++
T Consensus 25 ~L~IDiGNT~ik~g~~~~~~ 44 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIEGAA 44 (271)
T ss_dssp EEEEEECSSCEEEEEEETTT
T ss_pred EEEEEeCCCeeEEEEEeCCC
Confidence 68999999999999998 54
No 188
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=21.42 E-value=82 Score=32.09 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=35.0
Q ss_pred CCccEEEEeCCCCChHHHHHHHHhhcCCCCcccCCchhHHHhhHHHh
Q 003056 330 EDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (852)
Q Consensus 330 ~~I~~ViLvGG~sriP~v~~~l~~~fg~~v~~~~n~deava~GAa~~ 376 (852)
..+|.|+| ||+-+|++...|++.+|..+ .-+||-+++|+-+.-+
T Consensus 177 ~g~D~iVL--GCTh~pll~~~i~~~~~~~v-~vIDs~~~~a~~~~~~ 220 (269)
T 3ist_A 177 TKIDTVIL--GCTHYPLLKPIIENFMGDGV-AVINSGEETASEVSAL 220 (269)
T ss_dssp SCCCEEEE--CSTTGGGGHHHHHHHHCTTS-EEECTHHHHHHHHHHH
T ss_pred CCCCEEEE--CCCCHHHHHHHHHHHcCCCC-eEECcHHHHHHHHHHH
Confidence 35788777 99999999999999998554 5578988888776543
No 189
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=21.22 E-value=6.8e+02 Score=25.63 Aligned_cols=231 Identities=12% Similarity=0.075 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCCcCcEEEEEcC------------CCCHHHHHHHHHHHHHcCCcceeeechhHHHHHHhhhh-----
Q 003056 122 LSNLKAIAESNLNAAVVDCCIGIPV------------YFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIY----- 184 (852)
Q Consensus 122 L~~l~~~a~~~~~~~~~~~VitVP~------------~f~~~qR~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~----- 184 (852)
+..+.+..-...+..+..+.|++|. .|. ..++.+.+.. |++.+.+.|+..|+|++-...
T Consensus 52 ~~~~i~~~~~~~~~~i~gigi~~pG~vd~~~~~~~nl~w~-~~~~~l~~~~---~~p~V~v~NDanaaalgE~~~~~~~~ 127 (332)
T 1sz2_A 52 LEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWA-FSIAEMKKNL---GFSHLEIINDFTAVSMAIPMLKKEHL 127 (332)
T ss_dssp HHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSSCCC-EEHHHHHHHH---TCSEEEEEEHHHHHHHHGGGCCGGGE
T ss_pred HHHHHHHHHHhcCCCccEEEEEEeCceeCCEEeeeCCCCc-CCHHHHHHHh---CCCcEEEEeCHhHHhccccccChhhh
Q ss_pred --------cCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEeCCCCcc-cHHHHHHHHHHHHHHHHhhhccccc
Q 003056 185 --------KTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVG-GRDFDEVLFQHFAAKFKEEYKIDVS 255 (852)
Q Consensus 185 --------~~~~~~~~~~~vlv~D~GggT~dvsiv~~~~~~~~vl~~~~d~~lG-G~~~D~~l~~~l~~~~~~k~~~~~~ 255 (852)
+. ...++++-+|.|-=-..++.-..|..-.-+-.|...+. ....+..+..+++..+. ..-+...
T Consensus 128 ~~~g~g~~~~------~~~~~~v~~GTGiG~giv~~g~~G~~g~agE~GH~~v~~~~~~~~~l~~~~c~~~g-~gclE~~ 200 (332)
T 1sz2_A 128 IQFGGAEPVE------GKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIG-HVSAERV 200 (332)
T ss_dssp EECSSCCCCT------TCCEEEEEESSSEEEEEEEEETTEEEEEECCGGGSBCCCCSHHHHHHHHHHHHHSS-SCBGGGT
T ss_pred eecCCCCCCC------CCcEEEEEcCccceEEEEecCCCCeeeCCCCccccCcCCCChHHHHHHHHHHhccC-Ccchhhh
Q ss_pred CCHHHHHHHHHHHHHhhhhcCCCCcccEEEecccCC-cceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccE
Q 003056 256 QNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE-KDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHM 334 (852)
Q Consensus 256 ~~~~~~~rL~~~aek~K~~LS~~~~~~i~ie~l~~~-~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~I~~ 334 (852)
-+..++.++..........-........-.+....+ ...- ++-|++.+..+-.-+..++.-. +.+.
T Consensus 201 ~S~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~a~~G~D~~A----~~~~~~~~~~Lg~~i~~l~~~l---------~P~~ 267 (332)
T 1sz2_A 201 LSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDC----RRALSLFCVIMGRFGGNLALNL---------GTFG 267 (332)
T ss_dssp SSHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHTCCHHH----HHHHHHHHHHHHHHHHHHHHHH---------TCTT
T ss_pred ccHHHHHHHHHHHhhccCCCccCCCHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHHHHHHHHH---------CCCe
Q ss_pred -EEEeCCCCCh-------HHHHHHHHh--hc-----CCCCcccCCchhHHHhhHHHhh
Q 003056 335 -VEVVGSSSRV-------PAIIKILTE--FF-----GKEPRRTMNASECVARGCALQC 377 (852)
Q Consensus 335 -ViLvGG~sri-------P~v~~~l~~--~f-----g~~v~~~~n~deava~GAa~~a 377 (852)
|+|.||.+.. |.+++.+.+ .+ ..++.... .+.+..+||+.++
T Consensus 268 gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~a~l~GAa~l~ 324 (332)
T 1sz2_A 268 GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV-HDNPGLLGSGAHL 324 (332)
T ss_dssp EEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEEC-CSCHHHHHHHHHH
T ss_pred EEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEE-CCchhHHHHHHHH
No 190
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=21.22 E-value=3.6e+02 Score=22.51 Aligned_cols=89 Identities=8% Similarity=0.046 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHhhhc--------CCCccHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHHHHHHHHHhc
Q 003056 653 ERELFTSKLQETEDWLYED--------GEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCINSYREAALS 724 (852)
Q Consensus 653 er~~i~~~l~e~~~WL~~d--------g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~ 724 (852)
+...|...++++..||.+- ....+...+...++..+.+..-|..+.. .+ ......+..++..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~-------~v---~~~~~~g~~L~~~ 72 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQG-------RV---GNILQLGSKLIGT 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHH-------HH---HHHHHHHHHHHHc
Confidence 4567888888999999641 1123444555555555554444443311 11 1222223333322
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 003056 725 SDPKFDHIDIAEKQKVLNECADAEAWVREKKQ 756 (852)
Q Consensus 725 ~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~ 756 (852)
.|.+.++...|...++.+..-|+....
T Consensus 73 -----~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (119)
T 3uun_A 73 -----GKLSEDEETEVQEQMNLLNSRWECLRV 99 (119)
T ss_dssp -----TCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245566677777777777666654433
No 191
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=20.80 E-value=75 Score=34.21 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHhhcCCC
Q 003056 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (852)
Q Consensus 309 ~~~~~i~~~i~~~l~~a~~~~~~I~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (852)
...+.+...|+++|+++|++.++|+.|++-+++.++ -+.+.+.+|.+
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl~ 330 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGIS 330 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCCC
Confidence 445667778999999999999999999999888664 45577777754
No 192
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=20.58 E-value=2e+02 Score=31.53 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=21.0
Q ss_pred CceEEEEEeCCceeEEEEEEeeC
Q 003056 193 QLNVAFVDIGHASLQVCIAGFKK 215 (852)
Q Consensus 193 ~~~vlv~D~GggT~dvsiv~~~~ 215 (852)
...+|.+|+||.++-+.++++.+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 46789999999999999999976
No 193
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=20.52 E-value=5.7e+02 Score=31.89 Aligned_cols=127 Identities=9% Similarity=0.030 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhHHHhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHH
Q 003056 603 VQKAVEKEFEMALQDRVMEETKDRKNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVA 682 (852)
Q Consensus 603 i~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~dg~~a~~~~~~~ 682 (852)
.+.+.+.+.++....--..+.+.++|.+|.-. |..- ..++ .-+.-.+.-+..|+|+.... ..-.|.+
T Consensus 483 ~~~I~~~L~~l~~~gi~~~ele~a~~~le~~~---re~~------~~~~---~gl~~~~~~~~~w~~~~dp~-~~l~~~~ 549 (1193)
T 3s5m_A 483 EDVIMNALKKVVKEGFNKSAVEASINNIEFIL---KEAN------LKTS---KSIDFVFEMTSKLNYNRDPL-LIFEFEK 549 (1193)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH---HHHT------TSTT---HHHHHHHHHHHHHHTTCCTT-TTTSHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH---Hhcc------CCCC---cHHHHHHHHHHHHHcCCCHH-HHHHHHH
Confidence 34444556666665555566777888888643 3210 1111 22333456678899975322 2234666
Q ss_pred HHHHHHhcc----chHHHHHHhhh--c--------chH------HHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 003056 683 KLEELKKQG----DPIEERYKEFT--D--------RSS------VIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLN 742 (852)
Q Consensus 683 kl~~L~~~~----~pi~~R~~e~~--~--------rp~------a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~ 742 (852)
.++.|+... .-+..-+++|- . .|. .-+..++.|...+. .+++++++.|..
T Consensus 550 ~l~~l~~~~~~~~~~~~~li~~yll~n~~~~~~~~~P~~~~~~~~~~~e~~~L~~~~~----------~ls~~~~~~i~~ 619 (1193)
T 3s5m_A 550 YLNIVKNKIKNEPMYLEKFVEKHFINNAHRSVILLEGDENYAQEQENLEKQELKKRIE----------NFNEQEKEQVIK 619 (1193)
T ss_dssp HHHHHHHHHHHSTTHHHHHHHHHTTTCCCEEEEEEEEESSHHHHHHHHHHHHHHHHHH----------HCCHHHHHHHHH
T ss_pred HHHHHHHHhhcChHHHHHHHHHHhccCCceEEEEEEcCCCHHHHHHHHHHHHHHHHHh----------hCCHHHHHHHHH
Confidence 676666543 12333333332 0 111 12223333333332 357999999999
Q ss_pred HHHHHHHHHH
Q 003056 743 ECADAEAWVR 752 (852)
Q Consensus 743 ~~~~~~~Wl~ 752 (852)
...+++.|-+
T Consensus 620 ~~~~L~~~q~ 629 (1193)
T 3s5m_A 620 NFEELSKYKN 629 (1193)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9988888865
No 194
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=20.46 E-value=54 Score=35.07 Aligned_cols=20 Identities=20% Similarity=0.160 Sum_probs=17.5
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 003056 1 MSVVGFDLGNESCIVAVARQ 20 (852)
Q Consensus 1 m~viGID~GTt~s~va~~~~ 20 (852)
|.+||||+|.|++++++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 46899999999999999864
No 195
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=20.09 E-value=4.8e+02 Score=24.04 Aligned_cols=92 Identities=17% Similarity=0.170 Sum_probs=49.1
Q ss_pred HHHHhccchHHHHHHhhhcchHHHHHHHHHHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003056 685 EELKKQGDPIEERYKEFTDRSSVIDQLAYCINSYREAALSSD---PKFDHIDIAEKQKVLNECADAEAWVREKKQQQDAL 761 (852)
Q Consensus 685 ~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~---~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~ 761 (852)
++-+...+-...-.+.+..-..++..+.+.++.+...+...+ +.|..+.-+|++--+.+ -..--+..+-+|+.+
T Consensus 103 ~eAQ~AtD~y~~Ainny~~Ads~~~~lekKvn~aq~kLs~L~P~dP~Y~K~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 179 (201)
T 3u0c_A 103 SETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSELDPESPEKKKLSREEIQLTIKK---DAAVKDRTLIEQKTL 179 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSCTTHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccHHHHhhhhhc---cchhhhhhhHHhhhh
Confidence 333344444444455566666778888899999988887754 45555555555443332 223333344445543
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHhh
Q 003056 762 PKYAAPVLLLGDVRRKAEALDRFCR 786 (852)
Q Consensus 762 ~~~~dP~~~~~di~~k~~~l~~~~~ 786 (852)
.-|. -+..|...|++++.
T Consensus 180 ~~~~-------~~~~~~~~~~~~~~ 197 (201)
T 3u0c_A 180 SIHS-------KLTDKSMQLEKEID 197 (201)
T ss_dssp HHHH-------HHHHHHHHHHHHHH
T ss_pred hHHh-------hhchHHHHHHHHhh
Confidence 3221 23444445555544
Done!