Query 003058
Match_columns 852
No_of_seqs 251 out of 817
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 11:47:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rip_A Gamma-tubulin complex c 100.0 3.2E-66 1.1E-70 623.3 44.6 482 42-852 1-535 (677)
2 3t98_B Nucleoporin NUP58/NUP45 22.5 1.7E+02 0.0059 25.2 6.2 50 115-164 7-56 (93)
3 2rpa_A Katanin P60 ATPase-cont 8.2 3.2E+02 0.011 22.8 3.7 36 661-696 11-46 (78)
4 4e17_B Catenin alpha-1; four h 6.9 3.4E+02 0.012 19.7 2.8 16 118-133 21-36 (40)
5 1rbl_M Ribulose 1,5 bisphospha 4.4 3.5E+02 0.012 24.1 1.9 15 528-542 15-29 (109)
6 3pp5_A BRK1, protein brick1; t 4.4 6.2E+02 0.021 20.8 3.2 27 118-144 36-62 (73)
7 3vjf_A WA20; protein design, d 4.2 6.6E+02 0.023 20.6 3.3 23 829-851 56-78 (102)
8 1svd_M Ribulose bisphosphate c 4.2 3.8E+02 0.013 23.9 2.0 15 528-542 17-31 (110)
9 4e18_B Catenin alpha-1; four h 4.0 6.2E+02 0.021 19.9 2.8 16 118-133 40-55 (59)
10 3zxw_B Ribulose bisphosphate c 3.7 4.4E+02 0.015 23.8 2.0 16 527-542 13-28 (118)
No 1
>3rip_A Gamma-tubulin complex component 4; helix bundles, gamma-tubulin ring complex, gamma-TURC, struc protein; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-66 Score=623.25 Aligned_cols=482 Identities=20% Similarity=0.321 Sum_probs=364.4
Q ss_pred HHHHHHHhhcCCCCCeEEEeCCCccEEEecCceeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc------CC---
Q 003058 42 LVRGVLQMLQGLSSSLFYWDESVRSFCVKTGIYVTHLSLKSVHVVLNQFIYAATCLKLVEISVTRVETT------GR--- 112 (852)
Q Consensus 42 LvrdlL~~L~Gi~g~~f~~~~~~~~f~i~~~i~vs~ls~~sl~~Ll~~~l~lG~~~~~Lr~Fve~~~~~------~~--- 112 (852)
+|||+||+|+|++|.||.+++. ++|.+++++. .++ +++++++++++++|++|++|++|++..... ++
T Consensus 1 Ml~dlL~~L~G~~g~~i~~~~~-~~f~v~~~~~--~l~-~s~r~ll~~l~~lg~~y~~l~~fv~~~~~~~~~~~~~~~~~ 76 (677)
T 3rip_A 1 MIHELLLALSGYPGSIFTWNKR-SGLQVSQDFP--FLH-PSETSVLNRLCRLGTDYIRFTEFIEQYTGHVQQQDHHPSQQ 76 (677)
T ss_dssp CHHHHHHHHTTCCCSSSEEETT-TEEECCSCCT--TSC-HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-----------
T ss_pred ChHHHHHHHcCCCCCceEecCC-CceeeCCCCC--CCC-HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcccccccc
Confidence 5899999999999999998754 4799998753 334 689999999999999999999999974321 01
Q ss_pred ----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhccCCcccccCCC
Q 003058 113 ----ISSPTLRAFSSAVSAWLKMFRGIALKEEMKITESNVGNTPTLLGLASSLSSLCSGGEYLLQIVDGAIPQVCFQFNM 188 (852)
Q Consensus 113 ----~~g~v~qAf~~aL~~~L~~Y~~~l~~LE~~l~~~~~~~~~TLl~L~~~L~~~~~~l~~L~~l~~~~i~~~~~~~~~ 188 (852)
..|+++||||++|+++|.+|+..|+++|.++.. ...+||..|...++++...++.|..++.....
T Consensus 77 ~~~~~~g~v~~Al~~~i~~~L~~Y~~~i~~lE~~~l~---~~~~sL~~l~~~l~~~~~~l~~L~~l~~~~~~-------- 145 (677)
T 3rip_A 77 GQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLG---DPHLSISHVNYFLDQFQLLFPSVMVVVEQIKS-------- 145 (677)
T ss_dssp --CCSCSHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---CTTCCHHHHHHHTHHHHHHHHHHHHHHHHHHH--------
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 169999999999999999999999999999975 24689999999999999999999999864221
Q ss_pred CCCcccchHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHhHHHHHHHHHHHHhcccccCCCCcceEEecCCCCC---
Q 003058 189 PVPAAQVAVHILDYLYKKLDEVCLVQGGEVEEYQMLLHIFVGSLLPYIEGLDSWLFEGMLDDPYEEMFFYANRAISV--- 265 (852)
Q Consensus 189 ~~~~~~~G~~LLs~Ly~~~~~~~~~~~Gd~~~~~ll~~Ll~~~~~PYl~~L~~WI~~G~L~Dp~~EFFI~~~~~v~~--- 265 (852)
...+||++|+.||+.+ .+|||.+++++.+|+..|++||++||..||.+|+|.|||+||||++++....
T Consensus 146 ---~~~~G~~lL~~L~~~~------~~Gd~~~~~~~~~Ll~~~~~~~~~~L~~Wl~~G~L~Dp~~EFFI~~~~~~~~~~~ 216 (677)
T 3rip_A 146 ---QKIHGCQILETVYKHS------CGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSA 216 (677)
T ss_dssp ---HTCCTHHHHHHHHHHH------HSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSCSSEEEC--------
T ss_pred ---CCCCHHHHHHHHHHHH------hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCCcchheeEeccccccccc
Confidence 1269999999999876 3799999999999999999999999999999999999999999998764321
Q ss_pred -------------------------------CchhhcccceEEEeccccccccccccccccCccccchhhhhhcCccccc
Q 003058 266 -------------------------------DKAEFWEKSYVLRQLQCWKLDAESSSLTSESSHVRETNEKRQNGLRESI 314 (852)
Q Consensus 266 -------------------------------~~~~~W~~~y~lr~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~ 314 (852)
+...+|+.+|+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~w~~~y~l~~----------------------------------- 261 (677)
T 3rip_A 217 QPEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRV----------------------------------- 261 (677)
T ss_dssp ------------------------------------CCCCEEECG-----------------------------------
T ss_pred cccccccccccccccccccchhhhhhcccccccccchhcceeecH-----------------------------------
Confidence 01147999999987
Q ss_pred cccccCCCCCCCCcchH-HHHHHHHHHhHHHHHHHhhcCCCCcchhhhccCCCCCCCCccccccccccccchhHHHHHHh
Q 003058 315 SLSSSVKGLQACPLFIK-DIAKSIISAGKSLQLIRHVSSKSNDDRIECLGNFNYGSDWSTVHRGQSIAGLTLSEIFCISL 393 (852)
Q Consensus 315 ~~~~~~~~~~~vP~FL~-~~a~kIl~~GKsl~lLr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 393 (852)
.++|.|+. .+|+|||.||||+|+||++|.... +.. .+
T Consensus 262 ---------~~lP~Fl~~~~A~kIl~~GKsln~lr~~~~~~~-------~~~------------------~~-------- 299 (677)
T 3rip_A 262 ---------EILPSYIPVRVAEKILFVGESVQMFENQNVNLT-------RKG------------------SI-------- 299 (677)
T ss_dssp ---------GGSCTTSCHHHHHHHHHHHHHHHTCCC-CCSCC----------------------------CT--------
T ss_pred ---------hhCcCccCHHHHHHHHHhhHHHHHHHccCCCCC-------ccc------------------cc--------
Confidence 36999996 699999999999999999764421 000 00
Q ss_pred hhccCCCcccccccccCCCCCCcccCCCcccccchhccCCCcccccccccchhhHHHHHHhhhhhhcccccccCCcccCC
Q 003058 394 AGLIGHGDHIFRYFWQDDSCESEFIPSLPSYMNDQMTRNGNTETLAVLTHSEKTWFKFLLDTLLQKGVIDQKSGNKVASN 473 (852)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 473 (852)
+ +. .+.++.+.+
T Consensus 300 --------------~----------~~-----------------------~~~~~~~~l--------------------- 311 (677)
T 3rip_A 300 --------------L----------KN-----------------------QEDTFAAEL--------------------- 311 (677)
T ss_dssp --------------T----------CS-----------------------HHHHHHHHH---------------------
T ss_pred --------------c----------cc-----------------------hHHHHHHHH---------------------
Confidence 0 00 000000000
Q ss_pred CCcccccccchhhhcccccccccCCCCCcccccccccccccccchhhhhhhccccCCCCCChHHHHHHHhccccCCcccc
Q 003058 474 VPNMKEENMGKIIENNLFTQKTFCPENPVISVCDVSLNINKSSNIWNALNLSRNYYLPPLNDEVLRKAVLGAESGNISEL 553 (852)
Q Consensus 474 ~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (852)
..+
T Consensus 312 ------------------------------------------------------------------~~L----------- 314 (677)
T 3rip_A 312 ------------------------------------------------------------------HRL----------- 314 (677)
T ss_dssp ------------------------------------------------------------------HHH-----------
T ss_pred ------------------------------------------------------------------HHH-----------
Confidence 000
Q ss_pred cCCCccccccccccchhhcccccccccccCCCCccCCCcccccccccccccccCCCCccchhccccccCCCCCCCcHHHH
Q 003058 554 KGTNYAFGFQFGESEHLRSQCDTKLLEVLFPFPTILPSFRDELHISELLPFQKNSTLPSRVLSWIQSVEPRTTPLPVVIM 633 (852)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~p~~~l 633 (852)
.+++ +|+
T Consensus 315 -----------------------------~~~~----------------~~~---------------------------- 321 (677)
T 3rip_A 315 -----------------------------KQQP----------------LFS---------------------------- 321 (677)
T ss_dssp -----------------------------HTCS----------------SCC----------------------------
T ss_pred -----------------------------hccc----------------cCC----------------------------
Confidence 0000 000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHh
Q 003058 634 QECLTVYIKKQVDHIGKLILSNLMNDWRLMDELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGENWDDDFELNTLLQESIR 713 (852)
Q Consensus 634 ~~~l~~~I~~~y~~a~~~Ll~~L~~~~~L~~hL~aLr~yfLL~~GDf~~~F~~~l~~~L~k~~~~~~~~~L~~lL~~Al~ 713 (852)
...+...|+++|..||+.|+++|+++++|.+||++||+||||++|||+.+|++.++++|++|+.+++.++|+.+|+.|++
T Consensus 322 ~~~~e~~I~~~~~~as~~Ll~lL~~~~~L~~hL~~Lk~yfLL~~Gdf~~~f~~~~~~~L~~~~~~~~~~~L~~~L~~a~~ 401 (677)
T 3rip_A 322 LVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAH 401 (677)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHH
Confidence 00123478899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCC---CceEEEEEecCCCCCCCCccccccCCCCCCCCCCCCCccccceEEEEEeecCccceeeCHHHHHHH
Q 003058 714 NSADGKLLSAP---DALEVLITESHGSNSDEQPSMANLASTPRKSHPHSFGIDGLDLLKFTYKVSWPLELIANMEAIKKY 790 (852)
Q Consensus 714 ~ss~~~~~~d~---~~L~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~d~~~L~Y~V~WPLslIit~~~m~~Y 790 (852)
.+.. .|+ +++.+++.... ....+...... .. .........+..|||+|+|+|+|||||++|||+++|.+|
T Consensus 402 ~~~~----~~~~~~~~L~~~i~~~~-~~~~~~~~~~~-~~-~~~~~~~~~~~~~~d~l~L~Y~v~~PL~liit~~~l~~Y 474 (677)
T 3rip_A 402 KVLL----DDDNLLPLLHLTIEYHG-KEHKDATQARE-GP-SRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKY 474 (677)
T ss_dssp HTTC----CCTTTGGGEEEEECCCC--------------------------CCTTTTEEEEECCCTTGGGTSCHHHHHHH
T ss_pred HccC----CchhhHhcceEEeeccc-ccccccccccc-cc-ccccccccCCccchheEEEEEeCCChHHHhCCHHHHHHH
Confidence 7642 222 67888775431 11110000000 00 000112234688999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhc--cCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 003058 791 NQVMGFLLKVKRAKFALDKARRWMWKG--RSLATNSHSHKRHWLVEQKLLHFVDAFHQYVMDRV 852 (852)
Q Consensus 791 q~IFrfLl~lKr~e~~L~~~~~W~~~~--~~~~~~~~~~~~~~~LR~~Ml~Fv~~L~~Yl~~eV 852 (852)
++||+|||++||+++.|+++ |.... +.........++ +.+|++|+|||++|++|++++|
T Consensus 475 ~~iF~~Ll~lkr~~~~L~~~--w~~~~~~~~~~~~~~~~~~-~~lr~~m~~Fv~~l~~Y~~~~V 535 (677)
T 3rip_A 475 NVVFKYLLSVRRVQAELQHC--WALQMQRKHLKSNQTDAIK-WRLRNHMAFLVDNLQYYLQVDV 535 (677)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHHHTSGGGCCSSHHHHHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHhccccCCCchhHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 86532 111111123344 8999999999999999999987
No 2
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=22.51 E-value=1.7e+02 Score=25.24 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=36.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHhh
Q 003058 115 SPTLRAFSSAVSAWLKMFRGIALKEEMKITESNVGNTPTLLGLASSLSSL 164 (852)
Q Consensus 115 g~v~qAf~~aL~~~L~~Y~~~l~~LE~~l~~~~~~~~~TLl~L~~~L~~~ 164 (852)
....+-++.-.++.|..|+..|-++|..+.....+.+.|...|...|+..
T Consensus 7 ~~yF~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~ 56 (93)
T 3t98_B 7 ADYFRVLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKI 56 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 45677788888899999999999999998864443456665555555443
No 3
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=8.24 E-value=3.2e+02 Score=22.76 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=32.1
Q ss_pred cHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhcCC
Q 003058 661 RLMDELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGE 696 (852)
Q Consensus 661 ~L~~hL~aLr~yfLL~~GDf~~~F~~~l~~~L~k~~ 696 (852)
.+.++++.=|.|-|+|+.|-...|++.+-..+.+-.
T Consensus 11 ~i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l 46 (78)
T 2rpa_A 11 MIVENVKLAREYALLGNYDSAMVYYQGVLDQMNKYL 46 (78)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999998888753
No 4
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=6.92 E-value=3.4e+02 Score=19.70 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 003058 118 LRAFSSAVSAWLKMFR 133 (852)
Q Consensus 118 ~qAf~~aL~~~L~~Y~ 133 (852)
+.|+..||++.|.+|.
T Consensus 21 CnavrqALQdLlseY~ 36 (40)
T 4e17_B 21 CNAVRQALQDLLSEYM 36 (40)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4466667777777774
No 5
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=4.37 E-value=3.5e+02 Score=24.07 Aligned_cols=15 Identities=40% Similarity=0.851 Sum_probs=13.0
Q ss_pred cCCCCCChHHHHHHH
Q 003058 528 YYLPPLNDEVLRKAV 542 (852)
Q Consensus 528 ~~~~~~~~~~~~~~~ 542 (852)
.|||||+++++.+.|
T Consensus 15 SyLP~lt~eqI~kQI 29 (109)
T 1rbl_M 15 SYLPPLSDRQIAAQI 29 (109)
T ss_dssp TTSSCCCHHHHHHHH
T ss_pred ccCCCCCHHHHHHHH
Confidence 589999999888776
No 6
>3pp5_A BRK1, protein brick1; triple coiled-coil, precursor of the SCAR-WAVE complex, ABI, structural protein; 1.50A {Dictyostelium discoideum}
Probab=4.36 E-value=6.2e+02 Score=20.83 Aligned_cols=27 Identities=11% Similarity=0.062 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003058 118 LRAFSSAVSAWLKMFRGIALKEEMKIT 144 (852)
Q Consensus 118 ~qAf~~aL~~~L~~Y~~~l~~LE~~l~ 144 (852)
+.-|...-+..|..+...|..+|..+.
T Consensus 36 LN~F~~sce~KLa~ln~kL~~lE~~L~ 62 (73)
T 3pp5_A 36 LNKFELSTRNKLSDLNEKLTILDRQVD 62 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555556666666666666555543
No 7
>3vjf_A WA20; protein design, de novo protein, binary patterned design, FO bundle, rudimentary enzymatic activitie; 2.20A {Synthetic construct}
Probab=4.25 E-value=6.6e+02 Score=20.56 Aligned_cols=23 Identities=4% Similarity=0.148 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 003058 829 RHWLVEQKLLHFVDAFHQYVMDR 851 (852)
Q Consensus 829 ~~~~LR~~Ml~Fv~~L~~Yl~~e 851 (852)
+..-+.++|..|++++.+++..|
T Consensus 56 klqnmihemqqfmnqvdnhlqse 78 (102)
T 3vjf_A 56 KLQNMIHEMQQFMNQVDNHLQSE 78 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Confidence 45567889999999999888754
No 8
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=4.16 E-value=3.8e+02 Score=23.89 Aligned_cols=15 Identities=47% Similarity=0.955 Sum_probs=13.0
Q ss_pred cCCCCCChHHHHHHH
Q 003058 528 YYLPPLNDEVLRKAV 542 (852)
Q Consensus 528 ~~~~~~~~~~~~~~~ 542 (852)
.|||||+++++.+.|
T Consensus 17 SyLP~lt~eqI~kQV 31 (110)
T 1svd_M 17 SYLPPMNAERIRAQI 31 (110)
T ss_dssp TTSCCCCHHHHHHHH
T ss_pred ccCCCCCHHHHHHHH
Confidence 579999999888776
No 9
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=3.96 E-value=6.2e+02 Score=19.94 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 003058 118 LRAFSSAVSAWLKMFR 133 (852)
Q Consensus 118 ~qAf~~aL~~~L~~Y~ 133 (852)
+.|+..||++.|.+|.
T Consensus 40 CnavrqALQdLlsEY~ 55 (59)
T 4e18_B 40 CNAVRQALQDLLSEYM 55 (59)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4566667777777774
No 10
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=3.65 E-value=4.4e+02 Score=23.76 Aligned_cols=16 Identities=38% Similarity=0.789 Sum_probs=12.8
Q ss_pred ccCCCCCChHHHHHHH
Q 003058 527 NYYLPPLNDEVLRKAV 542 (852)
Q Consensus 527 ~~~~~~~~~~~~~~~~ 542 (852)
-.|||||+++++.+.|
T Consensus 13 fSyLP~Lt~eqI~kQV 28 (118)
T 3zxw_B 13 FSYLPPLSDAQIARQI 28 (118)
T ss_dssp -CCSCCCCHHHHHHHH
T ss_pred cccCCCCCHHHHHHHH
Confidence 3579999999888775
Done!