Query 003059
Match_columns 852
No_of_seqs 549 out of 3988
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 16:13:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003059.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003059hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 9.8E-55 2.1E-59 475.3 26.9 289 487-781 61-355 (361)
2 KOG0192 Tyrosine kinase specif 100.0 2.6E-45 5.7E-50 397.8 22.5 254 503-781 45-306 (362)
3 KOG0197 Tyrosine kinases [Sign 100.0 9.3E-45 2E-49 390.8 16.5 263 494-781 201-464 (468)
4 KOG0595 Serine/threonine-prote 100.0 1.2E-42 2.7E-47 360.2 19.7 198 500-709 11-218 (429)
5 KOG0581 Mitogen-activated prot 100.0 1.8E-42 3.9E-47 356.6 19.6 255 490-773 75-334 (364)
6 KOG1026 Nerve growth factor re 100.0 2.1E-43 4.6E-48 397.8 12.1 267 493-780 480-764 (774)
7 KOG0575 Polo-like serine/threo 100.0 8.7E-42 1.9E-46 370.8 18.5 246 499-773 18-268 (592)
8 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-42 2.8E-47 382.4 11.4 262 495-780 625-893 (996)
9 KOG0615 Serine/threonine prote 100.0 7.2E-42 1.6E-46 353.6 15.6 255 495-774 168-437 (475)
10 KOG0591 NIMA (never in mitosis 100.0 3.7E-42 8.1E-47 338.6 8.9 257 499-776 19-283 (375)
11 KOG3653 Transforming growth fa 100.0 7.3E-40 1.6E-44 344.1 19.7 271 501-781 212-506 (534)
12 KOG0193 Serine/threonine prote 100.0 4.5E-40 9.8E-45 355.1 13.9 265 492-780 385-655 (678)
13 KOG1095 Protein tyrosine kinas 100.0 4.3E-39 9.3E-44 376.0 21.4 269 493-782 686-965 (1025)
14 KOG2052 Activin A type IB rece 100.0 2.1E-38 4.5E-43 330.8 23.8 280 488-780 200-505 (513)
15 KOG0198 MEKK and related serin 100.0 8.2E-39 1.8E-43 336.4 17.4 254 500-775 18-277 (313)
16 KOG0598 Ribosomal protein S6 k 100.0 5.2E-39 1.1E-43 331.0 14.6 240 499-766 25-269 (357)
17 cd05102 PTKc_VEGFR3 Catalytic 100.0 1E-38 2.2E-43 352.4 17.4 265 496-780 4-336 (338)
18 KOG0582 Ste20-like serine/thre 100.0 3E-38 6.5E-43 329.7 19.3 258 498-773 25-292 (516)
19 KOG0194 Protein tyrosine kinas 100.0 4.9E-39 1.1E-43 352.6 12.5 266 493-784 151-426 (474)
20 KOG0592 3-phosphoinositide-dep 100.0 1.2E-37 2.5E-42 332.7 22.4 249 500-774 74-338 (604)
21 KOG1094 Discoidin domain recep 100.0 2.2E-38 4.8E-43 338.7 15.4 269 493-778 532-804 (807)
22 KOG0661 MAPK related serine/th 100.0 1.9E-38 4.2E-43 333.7 14.5 264 499-774 10-291 (538)
23 KOG0600 Cdc2-related protein k 100.0 4.3E-38 9.3E-43 333.4 17.0 263 500-773 118-399 (560)
24 KOG4721 Serine/threonine prote 100.0 1.9E-38 4.1E-43 337.5 14.0 238 505-777 130-367 (904)
25 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-37 3.2E-42 337.7 21.4 266 498-777 4-304 (304)
26 KOG0593 Predicted protein kina 100.0 3.7E-38 8E-43 313.5 12.5 259 503-773 6-283 (396)
27 KOG0578 p21-activated serine/t 100.0 6.7E-38 1.5E-42 337.9 15.5 246 501-773 275-522 (550)
28 PHA02988 hypothetical protein; 100.0 2.1E-37 4.5E-42 332.8 18.9 258 489-779 13-280 (283)
29 cd05104 PTKc_Kit Catalytic dom 100.0 1.8E-37 3.8E-42 346.7 18.2 263 496-778 32-374 (375)
30 KOG4278 Protein tyrosine kinas 100.0 2.6E-38 5.6E-43 338.7 10.8 262 492-778 260-523 (1157)
31 PLN00113 leucine-rich repeat r 100.0 8.5E-37 1.8E-41 382.9 26.3 270 490-780 682-953 (968)
32 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.9E-37 6.2E-42 328.7 17.7 257 496-778 2-265 (266)
33 cd05068 PTKc_Frk_like Catalyti 100.0 4.8E-37 1E-41 326.0 18.7 259 495-778 2-261 (261)
34 cd05072 PTKc_Lyn Catalytic dom 100.0 5.4E-37 1.2E-41 325.5 19.1 257 497-778 4-261 (261)
35 cd05106 PTKc_CSF-1R Catalytic 100.0 3.6E-37 7.8E-42 343.9 17.6 264 496-779 35-373 (374)
36 KOG0597 Serine-threonine prote 100.0 2E-37 4.3E-42 330.3 14.2 244 500-773 3-250 (808)
37 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8.9E-37 1.9E-41 323.0 19.1 251 500-776 5-256 (256)
38 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-36 2.6E-41 327.4 19.8 249 501-773 2-260 (285)
39 cd05048 PTKc_Ror Catalytic Dom 100.0 9.4E-37 2E-41 327.8 18.7 258 500-778 6-283 (283)
40 KOG0659 Cdk activating kinase 100.0 8.4E-37 1.8E-41 299.3 15.6 264 500-774 3-281 (318)
41 cd05052 PTKc_Abl Catalytic dom 100.0 1.5E-36 3.2E-41 322.7 18.7 256 498-778 5-262 (263)
42 KOG0583 Serine/threonine prote 100.0 1E-36 2.2E-41 334.1 17.7 248 496-772 14-273 (370)
43 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.9E-36 4.2E-41 339.4 18.7 265 495-779 33-398 (400)
44 KOG0611 Predicted serine/threo 100.0 3E-37 6.5E-42 316.5 11.0 247 498-775 52-304 (668)
45 PF07714 Pkinase_Tyr: Protein 100.0 4.6E-37 9.9E-42 325.8 12.8 249 503-775 3-259 (259)
46 cd05571 STKc_PKB Catalytic dom 100.0 3.5E-36 7.7E-41 329.7 20.2 240 505-773 1-250 (323)
47 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.2E-36 6.8E-41 318.8 19.0 252 499-776 4-256 (256)
48 KOG0588 Serine/threonine prote 100.0 8.3E-37 1.8E-41 332.4 14.8 245 500-774 13-263 (786)
49 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.6E-36 9.9E-41 318.3 20.1 257 495-777 2-259 (260)
50 KOG1989 ARK protein kinase fam 100.0 7.5E-36 1.6E-40 338.8 22.5 263 500-786 38-319 (738)
51 cd05071 PTKc_Src Catalytic dom 100.0 5.4E-36 1.2E-40 318.2 19.8 256 497-778 4-260 (262)
52 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.7E-36 1.7E-40 316.5 20.4 255 497-777 4-259 (260)
53 cd05033 PTKc_EphR Catalytic do 100.0 6.1E-36 1.3E-40 318.4 19.5 255 499-778 4-265 (266)
54 KOG2345 Serine/threonine prote 100.0 5.6E-37 1.2E-41 297.6 10.4 265 498-779 20-301 (302)
55 cd05059 PTKc_Tec_like Catalyti 100.0 5E-36 1.1E-40 317.2 18.7 250 500-775 5-255 (256)
56 PTZ00263 protein kinase A cata 100.0 3.3E-36 7.1E-41 330.8 17.5 243 499-773 18-270 (329)
57 cd05049 PTKc_Trk Catalytic dom 100.0 4.4E-36 9.6E-41 321.9 18.1 259 498-777 4-280 (280)
58 KOG0201 Serine/threonine prote 100.0 3.9E-37 8.4E-42 321.7 9.5 246 500-773 14-262 (467)
59 cd05148 PTKc_Srm_Brk Catalytic 100.0 4E-36 8.7E-41 318.8 17.4 254 499-778 6-261 (261)
60 cd05585 STKc_YPK1_like Catalyt 100.0 3.5E-36 7.6E-41 328.1 17.0 240 507-775 1-245 (312)
61 cd05612 STKc_PRKX_like Catalyt 100.0 2.1E-36 4.5E-41 326.5 15.1 242 500-773 2-253 (291)
62 KOG4257 Focal adhesion tyrosin 100.0 1.9E-36 4E-41 325.4 14.4 259 495-780 385-651 (974)
63 cd06649 PKc_MEK2 Catalytic dom 100.0 9.5E-36 2.1E-40 327.5 20.5 200 497-708 3-205 (331)
64 cd05584 STKc_p70S6K Catalytic 100.0 8.9E-36 1.9E-40 326.5 20.1 240 505-773 2-255 (323)
65 cd05090 PTKc_Ror1 Catalytic do 100.0 6.5E-36 1.4E-40 321.4 18.7 258 499-777 5-282 (283)
66 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.5E-36 1.6E-40 320.9 19.0 267 502-779 7-282 (283)
67 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-35 2.6E-40 326.9 21.0 249 501-773 2-266 (332)
68 cd05108 PTKc_EGFR Catalytic do 100.0 4.9E-36 1.1E-40 327.7 17.7 258 497-780 5-270 (316)
69 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5E-36 1.1E-40 330.1 17.7 251 500-774 2-257 (333)
70 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-35 2.6E-40 327.9 20.6 264 501-773 2-289 (338)
71 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.5E-36 9.9E-41 322.7 16.7 271 500-778 5-283 (284)
72 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-35 3E-40 314.6 20.1 255 497-777 4-259 (260)
73 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-35 2.3E-40 314.9 19.0 246 506-777 2-254 (257)
74 cd05582 STKc_RSK_N N-terminal 100.0 4.3E-36 9.4E-41 328.4 16.4 237 505-770 2-245 (318)
75 cd05062 PTKc_IGF-1R Catalytic 100.0 9.7E-36 2.1E-40 319.0 18.6 260 497-777 4-277 (277)
76 cd05593 STKc_PKB_gamma Catalyt 100.0 1.5E-35 3.2E-40 325.3 20.4 241 505-774 1-251 (328)
77 cd05091 PTKc_Ror2 Catalytic do 100.0 9E-36 1.9E-40 320.2 17.9 258 499-777 5-282 (283)
78 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-35 2.7E-40 316.3 18.8 256 499-778 5-267 (268)
79 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-35 3.9E-40 313.3 19.9 248 506-778 2-255 (257)
80 cd05054 PTKc_VEGFR Catalytic d 100.0 6.4E-36 1.4E-40 329.3 17.0 263 498-780 6-335 (337)
81 cd07848 STKc_CDKL5 Catalytic d 100.0 7.4E-36 1.6E-40 321.5 17.1 263 500-773 2-283 (287)
82 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-35 2.6E-40 320.7 18.6 261 499-780 5-284 (291)
83 cd07871 STKc_PCTAIRE3 Catalyti 100.0 9.4E-36 2E-40 321.0 17.7 263 500-773 6-284 (288)
84 cd06650 PKc_MEK1 Catalytic dom 100.0 2.1E-35 4.5E-40 324.9 20.7 201 496-708 2-205 (333)
85 cd05034 PTKc_Src_like Catalyti 100.0 2.1E-35 4.6E-40 313.2 19.4 257 496-777 3-260 (261)
86 KOG0585 Ca2+/calmodulin-depend 100.0 6.2E-36 1.4E-40 314.1 15.0 257 500-780 98-378 (576)
87 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-35 4.9E-40 323.3 20.2 240 505-773 1-250 (323)
88 cd05045 PTKc_RET Catalytic dom 100.0 1.7E-35 3.7E-40 319.3 18.8 259 501-780 2-288 (290)
89 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.5E-35 3.2E-40 332.1 18.9 266 494-779 32-400 (401)
90 cd05053 PTKc_FGFR Catalytic do 100.0 1.9E-35 4.1E-40 319.4 19.0 263 496-779 9-292 (293)
91 KOG0605 NDR and related serine 100.0 1E-35 2.2E-40 318.5 16.6 249 501-773 143-444 (550)
92 cd05111 PTK_HER3 Pseudokinase 100.0 1.8E-35 4E-40 317.2 18.8 255 500-780 8-270 (279)
93 KOG0589 Serine/threonine prote 100.0 1.9E-35 4.1E-40 318.1 18.7 249 500-774 5-258 (426)
94 cd05073 PTKc_Hck Catalytic dom 100.0 2.7E-35 5.9E-40 312.4 19.7 257 495-777 2-259 (260)
95 cd05060 PTKc_Syk_like Catalyti 100.0 3E-35 6.6E-40 311.4 19.9 249 505-779 1-256 (257)
96 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-35 3.4E-40 324.4 18.4 236 505-769 1-242 (321)
97 cd05084 PTKc_Fes Catalytic dom 100.0 2.2E-35 4.7E-40 311.4 18.8 247 505-776 1-251 (252)
98 cd05093 PTKc_TrkB Catalytic do 100.0 1.5E-35 3.2E-40 319.4 17.8 262 498-780 4-281 (288)
99 PTZ00426 cAMP-dependent protei 100.0 8.6E-36 1.9E-40 328.3 16.2 246 497-774 28-284 (340)
100 PTZ00267 NIMA-related protein 100.0 1.5E-35 3.2E-40 341.2 18.7 252 500-773 68-322 (478)
101 PLN00034 mitogen-activated pro 100.0 1.1E-35 2.4E-40 330.0 17.0 244 502-774 77-328 (353)
102 cd08228 STKc_Nek6 Catalytic do 100.0 2.9E-35 6.3E-40 313.3 19.5 259 500-779 3-266 (267)
103 cd05589 STKc_PKN Catalytic dom 100.0 2.5E-35 5.5E-40 323.1 19.1 243 501-773 1-256 (324)
104 cd05051 PTKc_DDR Catalytic dom 100.0 6.7E-35 1.5E-39 315.5 21.7 266 498-777 4-296 (296)
105 PHA03212 serine/threonine kina 100.0 3.6E-35 7.7E-40 329.0 19.8 194 497-706 90-284 (391)
106 cd05602 STKc_SGK1 Catalytic do 100.0 2.7E-35 5.9E-40 323.1 18.5 241 505-774 1-247 (325)
107 cd05097 PTKc_DDR_like Catalyti 100.0 6.6E-35 1.4E-39 315.5 21.2 268 496-777 2-295 (295)
108 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.6E-35 1E-39 322.6 20.3 267 495-782 8-297 (334)
109 KOG1025 Epidermal growth facto 100.0 3.2E-36 6.9E-41 332.8 10.9 250 504-779 701-958 (1177)
110 cd05066 PTKc_EphR_A Catalytic 100.0 3.1E-35 6.8E-40 313.2 18.2 256 499-778 4-266 (267)
111 cd05629 STKc_NDR_like_fungal C 100.0 3E-35 6.5E-40 329.5 18.9 201 500-708 2-251 (377)
112 cd07862 STKc_CDK6 Catalytic do 100.0 7.2E-35 1.6E-39 314.3 21.1 260 500-773 2-286 (290)
113 KOG0580 Serine/threonine prote 100.0 1E-35 2.2E-40 287.8 12.8 245 501-774 24-273 (281)
114 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.5E-35 7.5E-40 314.7 18.5 257 499-776 6-276 (277)
115 cd05605 STKc_GRK4_like Catalyt 100.0 4.4E-35 9.5E-40 315.2 19.2 250 500-773 1-260 (285)
116 cd05588 STKc_aPKC Catalytic do 100.0 6.4E-35 1.4E-39 320.5 20.7 247 505-773 1-261 (329)
117 cd05608 STKc_GRK1 Catalytic do 100.0 5.4E-35 1.2E-39 313.7 19.7 246 507-773 1-256 (280)
118 cd05626 STKc_LATS2 Catalytic d 100.0 8.4E-35 1.8E-39 326.2 21.7 201 501-709 3-252 (381)
119 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.7E-35 6E-40 319.8 17.3 262 499-773 5-287 (303)
120 cd05088 PTKc_Tie2 Catalytic do 100.0 2.9E-35 6.4E-40 319.5 17.5 260 499-782 7-284 (303)
121 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.5E-35 1.6E-39 310.6 20.3 255 505-776 1-268 (269)
122 cd05032 PTKc_InsR_like Catalyt 100.0 4.5E-35 9.8E-40 313.6 18.6 261 496-777 3-277 (277)
123 cd05628 STKc_NDR1 Catalytic do 100.0 1.2E-34 2.7E-39 322.8 22.9 200 501-708 3-239 (363)
124 cd05575 STKc_SGK Catalytic dom 100.0 4E-35 8.6E-40 321.5 18.5 236 505-769 1-242 (323)
125 cd05085 PTKc_Fer Catalytic dom 100.0 6.1E-35 1.3E-39 307.6 19.2 246 505-776 1-249 (250)
126 cd05042 PTKc_Aatyk Catalytic d 100.0 5.6E-35 1.2E-39 311.5 19.2 255 505-776 1-268 (269)
127 cd05075 PTKc_Axl Catalytic dom 100.0 6.1E-35 1.3E-39 311.7 19.4 256 502-778 2-271 (272)
128 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.8E-35 6.1E-40 316.6 16.8 263 499-778 4-283 (284)
129 KOG4279 Serine/threonine prote 100.0 1.8E-35 3.9E-40 320.7 15.1 243 506-773 582-831 (1226)
130 cd05043 PTK_Ryk Pseudokinase d 100.0 4.6E-35 1E-39 314.1 18.2 263 497-780 4-278 (280)
131 cd05035 PTKc_Axl_like Catalyti 100.0 8.8E-35 1.9E-39 310.5 20.3 256 502-778 2-272 (273)
132 cd05040 PTKc_Ack_like Catalyti 100.0 8.3E-35 1.8E-39 307.9 19.8 249 505-776 1-256 (257)
133 cd05594 STKc_PKB_alpha Catalyt 100.0 4.3E-35 9.4E-40 321.4 18.2 242 505-774 1-252 (325)
134 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.5E-35 7.5E-40 319.6 17.3 266 495-781 14-302 (307)
135 cd05089 PTKc_Tie1 Catalytic do 100.0 4.4E-35 9.6E-40 317.2 17.9 261 500-784 3-281 (297)
136 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.8E-35 4E-40 328.0 15.3 252 500-774 2-285 (350)
137 cd05591 STKc_nPKC_epsilon Cata 100.0 4E-35 8.8E-40 321.1 17.7 240 505-773 1-253 (321)
138 cd05592 STKc_nPKC_theta_delta 100.0 1.5E-34 3.2E-39 315.8 21.8 239 505-772 1-246 (316)
139 cd05112 PTKc_Itk Catalytic dom 100.0 6.9E-35 1.5E-39 308.3 18.6 251 500-776 5-256 (256)
140 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.7E-34 3.8E-39 307.1 21.7 258 500-779 3-266 (267)
141 cd05092 PTKc_TrkA Catalytic do 100.0 5.8E-35 1.3E-39 313.5 18.1 258 499-777 5-280 (280)
142 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.1E-35 1.1E-39 314.2 17.7 271 499-778 4-283 (284)
143 cd05095 PTKc_DDR2 Catalytic do 100.0 1.1E-34 2.4E-39 313.9 20.5 266 498-777 4-296 (296)
144 cd05047 PTKc_Tie Catalytic dom 100.0 8.2E-35 1.8E-39 310.5 19.1 251 505-779 1-269 (270)
145 KOG0616 cAMP-dependent protein 100.0 5.4E-35 1.2E-39 290.7 16.3 196 501-710 46-246 (355)
146 cd05061 PTKc_InsR Catalytic do 100.0 7E-35 1.5E-39 314.2 18.8 263 496-779 3-279 (288)
147 cd05618 STKc_aPKC_iota Catalyt 100.0 8.7E-35 1.9E-39 319.4 19.8 242 505-768 1-250 (329)
148 PTZ00283 serine/threonine prot 100.0 4.7E-35 1E-39 337.2 18.3 255 498-774 31-297 (496)
149 cd08229 STKc_Nek7 Catalytic do 100.0 9.6E-35 2.1E-39 309.3 19.2 258 500-778 3-265 (267)
150 cd05039 PTKc_Csk_like Catalyti 100.0 1E-34 2.2E-39 307.2 19.2 250 499-778 6-256 (256)
151 cd05109 PTKc_HER2 Catalytic do 100.0 8.5E-35 1.8E-39 312.0 18.9 258 498-781 6-271 (279)
152 cd05601 STKc_CRIK Catalytic do 100.0 6.5E-35 1.4E-39 320.9 18.4 250 500-773 2-262 (330)
153 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.6E-35 1.2E-39 317.5 17.6 266 495-781 11-299 (304)
154 cd05604 STKc_SGK3 Catalytic do 100.0 7.7E-35 1.7E-39 319.5 18.7 240 505-773 1-246 (325)
155 cd05590 STKc_nPKC_eta Catalyti 100.0 5.1E-35 1.1E-39 320.0 17.0 236 505-769 1-242 (320)
156 KOG0199 ACK and related non-re 100.0 1.4E-35 3.1E-40 322.4 12.1 248 501-774 112-368 (1039)
157 PTZ00266 NIMA-related protein 100.0 1.8E-34 3.9E-39 341.4 22.5 265 492-778 6-301 (1021)
158 cd05587 STKc_cPKC Catalytic do 100.0 8.3E-35 1.8E-39 319.1 18.3 239 501-768 2-246 (324)
159 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.8E-34 3.9E-39 316.7 20.9 243 505-769 1-249 (327)
160 cd05065 PTKc_EphR_B Catalytic 100.0 8.6E-35 1.9E-39 310.1 17.8 256 499-778 4-268 (269)
161 cd05607 STKc_GRK7 Catalytic do 100.0 2E-34 4.4E-39 308.7 20.7 246 507-775 1-251 (277)
162 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-34 3.1E-39 306.1 19.1 249 499-778 6-256 (256)
163 cd05050 PTKc_Musk Catalytic do 100.0 1E-34 2.2E-39 313.0 18.2 258 499-777 5-288 (288)
164 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.7E-35 1.2E-39 322.9 16.6 264 497-780 5-341 (343)
165 cd08529 STKc_FA2-like Catalyti 100.0 2.2E-34 4.8E-39 304.3 20.3 248 501-774 2-253 (256)
166 cd05055 PTKc_PDGFR Catalytic d 100.0 1.1E-34 2.5E-39 314.7 18.3 259 497-778 33-301 (302)
167 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-34 3.5E-39 298.1 18.3 267 500-774 12-302 (323)
168 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.7E-34 3.7E-39 315.3 19.5 263 497-780 10-295 (314)
169 cd05599 STKc_NDR_like Catalyti 100.0 7.4E-35 1.6E-39 325.0 16.7 251 500-773 2-295 (364)
170 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-34 2.5E-39 316.6 17.8 240 505-773 1-247 (316)
171 cd05616 STKc_cPKC_beta Catalyt 100.0 1E-34 2.2E-39 318.2 17.4 239 501-768 2-246 (323)
172 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-34 2.6E-39 316.9 17.7 240 505-773 1-251 (318)
173 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-34 4E-39 306.4 18.6 239 505-776 1-262 (262)
174 cd05596 STKc_ROCK Catalytic do 100.0 8.4E-35 1.8E-39 324.5 16.7 252 498-774 42-304 (370)
175 cd00192 PTKc Catalytic domain 100.0 3.6E-34 7.7E-39 303.2 20.7 251 505-776 1-262 (262)
176 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-34 2.4E-39 316.8 17.1 239 505-772 1-246 (316)
177 cd05598 STKc_LATS Catalytic do 100.0 1.1E-34 2.4E-39 324.9 17.5 202 500-709 2-248 (376)
178 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-34 3E-39 322.4 17.9 252 498-774 42-304 (370)
179 cd06646 STKc_MAP4K5 Catalytic 100.0 2.3E-34 4.9E-39 306.5 18.7 254 498-775 8-266 (267)
180 cd06619 PKc_MKK5 Catalytic dom 100.0 3.4E-34 7.4E-39 307.3 20.2 248 501-774 3-253 (279)
181 cd06654 STKc_PAK1 Catalytic do 100.0 3.5E-34 7.7E-39 309.9 20.0 247 500-773 21-269 (296)
182 KOG0663 Protein kinase PITSLRE 100.0 3E-34 6.4E-39 289.4 17.9 259 504-773 81-360 (419)
183 PRK13184 pknD serine/threonine 100.0 2.2E-34 4.8E-39 339.6 19.9 263 500-780 3-292 (932)
184 PF00069 Pkinase: Protein kina 100.0 1.7E-34 3.7E-39 305.8 17.1 251 501-773 1-256 (260)
185 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.3E-34 5.1E-39 307.7 18.2 238 506-776 2-274 (274)
186 cd07868 STKc_CDK8 Catalytic do 100.0 4.3E-34 9.3E-39 312.5 20.7 201 504-709 6-220 (317)
187 cd06637 STKc_TNIK Catalytic do 100.0 6.3E-34 1.4E-38 303.8 21.5 249 500-773 7-268 (272)
188 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-34 3.5E-39 324.2 17.5 201 500-708 2-251 (382)
189 cd05632 STKc_GRK5 Catalytic do 100.0 3.4E-34 7.4E-39 308.3 19.1 249 501-773 2-260 (285)
190 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.6E-34 3.4E-39 314.8 16.6 262 499-773 6-285 (309)
191 cd06612 STKc_MST1_2 Catalytic 100.0 6.4E-34 1.4E-38 300.8 20.8 248 500-773 4-252 (256)
192 cd05630 STKc_GRK6 Catalytic do 100.0 4.1E-34 8.9E-39 307.7 19.6 249 501-773 2-260 (285)
193 cd06625 STKc_MEKK3_like Cataly 100.0 3.9E-34 8.5E-39 303.8 19.1 251 500-774 3-260 (263)
194 cd05058 PTKc_Met_Ron Catalytic 100.0 3.6E-34 7.7E-39 304.0 18.8 251 505-779 1-260 (262)
195 KOG0667 Dual-specificity tyros 100.0 5.5E-34 1.2E-38 313.8 20.7 208 491-711 178-394 (586)
196 cd05624 STKc_MRCK_beta Catalyt 100.0 6E-34 1.3E-38 313.1 21.0 200 500-708 2-211 (331)
197 cd08219 STKc_Nek3 Catalytic do 100.0 4.1E-34 8.8E-39 302.3 18.7 248 501-774 2-252 (255)
198 cd05044 PTKc_c-ros Catalytic d 100.0 3.9E-34 8.3E-39 305.0 18.6 252 505-777 1-269 (269)
199 KOG0658 Glycogen synthase kina 100.0 1.2E-34 2.5E-39 298.2 13.7 265 504-780 29-314 (364)
200 cd05056 PTKc_FAK Catalytic dom 100.0 2.6E-34 5.6E-39 306.6 16.8 259 496-781 3-268 (270)
201 KOG0660 Mitogen-activated prot 100.0 3.1E-34 6.7E-39 294.5 16.5 260 504-773 27-309 (359)
202 cd05615 STKc_cPKC_alpha Cataly 100.0 2.9E-34 6.2E-39 314.5 17.5 240 501-769 2-247 (323)
203 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.6E-34 7.9E-39 303.2 17.5 238 505-776 1-259 (259)
204 cd07876 STKc_JNK2 Catalytic do 100.0 7.8E-34 1.7E-38 316.0 21.0 195 499-708 21-225 (359)
205 cd05586 STKc_Sck1_like Catalyt 100.0 6.2E-34 1.3E-38 313.1 19.5 239 507-773 1-252 (330)
206 cd05057 PTKc_EGFR_like Catalyt 100.0 4.4E-34 9.6E-39 306.4 17.8 257 498-780 6-270 (279)
207 PHA03211 serine/threonine kina 100.0 8.9E-34 1.9E-38 321.5 21.0 192 500-705 170-362 (461)
208 cd06615 PKc_MEK Catalytic doma 100.0 7.2E-34 1.6E-38 309.4 19.5 262 501-774 3-287 (308)
209 cd06631 STKc_YSK4 Catalytic do 100.0 8.4E-34 1.8E-38 301.7 19.4 250 501-773 2-261 (265)
210 cd05623 STKc_MRCK_alpha Cataly 100.0 3.4E-33 7.3E-38 307.4 24.8 200 500-708 2-211 (332)
211 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.9E-34 1.5E-38 305.8 18.9 257 498-776 4-268 (284)
212 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-33 2.3E-38 298.4 19.9 247 505-776 1-250 (251)
213 cd07853 STKc_NLK Catalytic dom 100.0 4.5E-34 9.8E-39 319.4 18.1 262 502-774 3-288 (372)
214 cd05597 STKc_DMPK_like Catalyt 100.0 2.7E-33 5.8E-38 308.0 23.8 200 500-708 2-211 (331)
215 KOG0694 Serine/threonine prote 100.0 2.2E-34 4.8E-39 316.5 14.9 238 500-768 369-613 (694)
216 PTZ00284 protein kinase; Provi 100.0 2.7E-34 5.8E-39 330.6 16.4 262 498-773 128-437 (467)
217 PHA03207 serine/threonine kina 100.0 1.1E-33 2.3E-38 318.3 20.9 267 494-774 87-375 (392)
218 cd06643 STKc_SLK Catalytic dom 100.0 8.5E-34 1.8E-38 304.7 19.2 249 501-774 7-262 (282)
219 cd08227 PK_STRAD_alpha Pseudok 100.0 9.9E-34 2.2E-38 311.0 19.8 200 503-708 2-213 (327)
220 cd06624 STKc_ASK Catalytic dom 100.0 8.8E-34 1.9E-38 302.2 18.8 245 504-773 13-264 (268)
221 cd06656 STKc_PAK3 Catalytic do 100.0 1.3E-33 2.7E-38 305.8 20.1 248 499-773 19-268 (297)
222 PTZ00036 glycogen synthase kin 100.0 3.5E-34 7.5E-39 326.1 16.2 266 499-779 66-358 (440)
223 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.8E-33 6.1E-38 298.4 22.1 254 505-776 1-267 (268)
224 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.6E-34 1.6E-38 304.3 17.6 246 500-774 5-253 (277)
225 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.3E-34 5E-39 304.9 13.5 239 505-776 1-258 (258)
226 cd07867 STKc_CDC2L6 Catalytic 100.0 1.7E-33 3.6E-38 307.8 20.6 199 505-708 7-219 (317)
227 cd07875 STKc_JNK1 Catalytic do 100.0 1.5E-33 3.3E-38 314.3 20.7 196 499-709 24-229 (364)
228 cd05046 PTK_CCK4 Pseudokinase 100.0 2.5E-33 5.5E-38 299.8 21.2 257 499-776 5-274 (275)
229 cd05622 STKc_ROCK1 Catalytic d 100.0 5E-34 1.1E-38 318.2 16.4 253 496-774 40-304 (371)
230 cd08528 STKc_Nek10 Catalytic d 100.0 1.8E-33 3.9E-38 299.9 20.0 253 501-776 2-268 (269)
231 cd06655 STKc_PAK2 Catalytic do 100.0 1E-33 2.3E-38 306.2 18.4 247 500-773 20-268 (296)
232 cd05083 PTKc_Chk Catalytic dom 100.0 1E-33 2.2E-38 299.1 17.9 247 499-777 6-253 (254)
233 PHA03209 serine/threonine kina 100.0 1.2E-33 2.5E-38 314.0 19.1 191 498-705 65-256 (357)
234 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-33 2.3E-38 304.8 18.1 259 501-773 2-284 (288)
235 cd06638 STKc_myosinIIIA Cataly 100.0 2.1E-33 4.5E-38 302.3 20.0 254 499-774 18-283 (286)
236 cd05110 PTKc_HER4 Catalytic do 100.0 8.8E-34 1.9E-38 308.0 17.0 256 500-781 8-271 (303)
237 cd06644 STKc_STK10_LOK Catalyt 100.0 2.1E-33 4.6E-38 303.2 19.8 250 499-773 12-268 (292)
238 cd07874 STKc_JNK3 Catalytic do 100.0 1.5E-33 3.3E-38 313.3 19.1 261 499-774 17-311 (355)
239 cd06611 STKc_SLK_like Catalyti 100.0 1.9E-33 4.2E-38 301.6 19.1 250 500-774 6-262 (280)
240 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.5E-33 5.4E-38 298.4 19.7 248 501-773 2-263 (267)
241 KOG0033 Ca2+/calmodulin-depend 100.0 6.8E-35 1.5E-39 281.7 6.7 249 499-773 11-266 (355)
242 cd06645 STKc_MAP4K3 Catalytic 100.0 1.9E-33 4.2E-38 299.3 18.7 250 500-773 10-264 (267)
243 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-33 2.7E-38 303.7 17.3 264 501-773 2-281 (285)
244 cd06640 STKc_MST4 Catalytic do 100.0 4.7E-33 1E-37 298.2 21.6 246 500-774 5-253 (277)
245 cd06609 STKc_MST3_like Catalyt 100.0 2.4E-33 5.3E-38 299.8 19.2 246 500-773 2-250 (274)
246 cd08223 STKc_Nek4 Catalytic do 100.0 2.9E-33 6.2E-38 296.0 19.5 247 501-773 2-253 (257)
247 cd05627 STKc_NDR2 Catalytic do 100.0 1.5E-33 3.3E-38 313.7 18.1 201 501-709 3-240 (360)
248 cd08221 STKc_Nek9 Catalytic do 100.0 3.5E-33 7.5E-38 295.3 19.9 248 501-774 2-253 (256)
249 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-33 3E-38 306.1 17.2 261 499-773 6-285 (301)
250 cd06639 STKc_myosinIIIB Cataly 100.0 3E-33 6.6E-38 301.9 19.8 252 500-773 23-286 (291)
251 cd06651 STKc_MEKK3 Catalytic d 100.0 3.3E-33 7.2E-38 297.4 19.8 248 501-773 4-260 (266)
252 KOG0032 Ca2+/calmodulin-depend 100.0 6.4E-33 1.4E-37 303.8 21.9 251 497-774 33-293 (382)
253 cd08218 STKc_Nek1 Catalytic do 100.0 2.7E-33 5.9E-38 296.1 18.3 247 501-773 2-252 (256)
254 cd06613 STKc_MAP4K3_like Catal 100.0 6.5E-33 1.4E-37 294.1 20.7 252 499-773 3-259 (262)
255 cd06652 STKc_MEKK2 Catalytic d 100.0 5.3E-33 1.1E-37 295.7 20.0 248 501-773 4-260 (265)
256 smart00219 TyrKc Tyrosine kina 100.0 5.3E-33 1.1E-37 293.8 19.8 249 502-775 2-258 (258)
257 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.4E-33 9.6E-38 299.6 19.3 262 500-773 2-282 (286)
258 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.9E-33 8.5E-38 297.9 18.7 256 502-778 2-272 (273)
259 KOG0610 Putative serine/threon 100.0 2E-33 4.3E-38 291.7 15.7 257 500-778 78-398 (459)
260 KOG0577 Serine/threonine prote 100.0 7.7E-34 1.7E-38 303.6 13.0 238 505-773 32-277 (948)
261 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.4E-33 7.4E-38 300.7 18.0 251 500-773 2-261 (286)
262 cd06626 STKc_MEKK4 Catalytic d 100.0 6.8E-33 1.5E-37 294.3 20.0 251 501-773 2-260 (264)
263 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-32 2.4E-37 291.6 21.5 245 501-773 2-254 (258)
264 cd06608 STKc_myosinIII_like Ca 100.0 7.2E-33 1.6E-37 295.8 19.5 253 499-773 6-271 (275)
265 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.5E-33 1.4E-37 297.8 19.2 250 499-773 16-278 (282)
266 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.1E-32 2.4E-37 293.1 20.8 257 500-773 2-263 (267)
267 cd06659 STKc_PAK6 Catalytic do 100.0 3.4E-33 7.5E-38 302.3 17.1 243 505-774 27-271 (297)
268 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.3E-32 5.1E-37 294.4 23.1 258 501-773 3-265 (287)
269 cd08217 STKc_Nek2 Catalytic do 100.0 7.1E-33 1.5E-37 293.9 18.7 253 501-774 2-262 (265)
270 cd07839 STKc_CDK5 Catalytic do 100.0 3.8E-33 8.1E-38 299.9 16.8 260 501-773 2-280 (284)
271 cd06658 STKc_PAK5 Catalytic do 100.0 2.9E-33 6.3E-38 302.1 15.9 244 504-774 27-272 (292)
272 cd07841 STKc_CDK7 Catalytic do 100.0 7.2E-33 1.6E-37 300.0 18.9 259 501-774 2-282 (298)
273 cd07844 STKc_PCTAIRE_like Cata 100.0 6.4E-33 1.4E-37 299.3 18.2 261 500-773 6-287 (291)
274 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.3E-33 7.2E-38 300.6 15.9 262 500-773 2-282 (286)
275 KOG0574 STE20-like serine/thre 100.0 1.6E-34 3.4E-39 286.2 4.9 246 501-773 35-282 (502)
276 cd05574 STKc_phototropin_like 100.0 8.8E-33 1.9E-37 302.0 19.3 252 500-773 2-288 (316)
277 cd06641 STKc_MST3 Catalytic do 100.0 9.8E-33 2.1E-37 295.7 19.2 246 500-774 5-253 (277)
278 KOG0599 Phosphorylase kinase g 100.0 1.4E-33 3.1E-38 276.4 11.2 247 501-773 19-282 (411)
279 cd06630 STKc_MEKK1 Catalytic d 100.0 1.5E-32 3.2E-37 292.5 20.0 252 501-773 2-263 (268)
280 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-32 3.5E-37 293.9 20.0 245 501-773 3-254 (277)
281 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.8E-33 3.8E-38 311.2 12.9 257 499-774 15-298 (343)
282 cd08220 STKc_Nek8 Catalytic do 100.0 1E-32 2.2E-37 291.5 18.1 246 501-773 2-252 (256)
283 cd07833 STKc_CDKL Catalytic do 100.0 6.2E-33 1.3E-37 298.7 16.6 264 500-773 2-284 (288)
284 cd07842 STKc_CDK8_like Catalyt 100.0 2.6E-32 5.6E-37 298.1 21.4 206 501-710 2-221 (316)
285 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-32 3.3E-37 296.7 19.2 249 499-774 19-269 (293)
286 cd05609 STKc_MAST Catalytic do 100.0 1.1E-32 2.5E-37 299.5 18.3 254 501-777 3-273 (305)
287 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-32 2.7E-37 295.6 18.4 249 501-773 3-260 (283)
288 KOG0584 Serine/threonine prote 100.0 3.2E-33 7E-38 304.5 13.7 244 502-773 43-295 (632)
289 KOG4717 Serine/threonine prote 100.0 7E-33 1.5E-37 291.9 15.7 246 499-773 18-269 (864)
290 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.4E-32 3.1E-37 296.7 18.6 263 500-773 6-287 (291)
291 cd06614 STKc_PAK Catalytic dom 100.0 2.2E-32 4.9E-37 294.3 20.0 249 500-773 20-269 (286)
292 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.8E-32 6E-37 291.2 20.4 253 501-774 3-269 (272)
293 PHA03210 serine/threonine kina 100.0 7.2E-33 1.6E-37 320.0 17.1 203 497-705 146-368 (501)
294 cd07832 STKc_CCRK Catalytic do 100.0 9.6E-33 2.1E-37 296.9 16.3 261 501-774 2-282 (286)
295 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-32 5E-37 294.1 18.9 243 504-773 24-268 (285)
296 cd06605 PKc_MAPKK Catalytic do 100.0 2.6E-32 5.7E-37 290.1 19.0 250 501-773 3-256 (265)
297 KOG0200 Fibroblast/platelet-de 100.0 1.6E-32 3.5E-37 321.8 19.0 266 494-778 291-579 (609)
298 cd05122 PKc_STE Catalytic doma 100.0 4.7E-32 1E-36 285.1 20.7 247 501-773 2-250 (253)
299 KOG0596 Dual specificity; seri 100.0 8.5E-33 1.9E-37 295.2 15.0 252 498-773 360-626 (677)
300 cd07836 STKc_Pho85 Catalytic d 100.0 2.2E-32 4.8E-37 293.9 18.5 261 501-773 2-280 (284)
301 cd08225 STKc_Nek5 Catalytic do 100.0 2E-32 4.2E-37 289.6 17.5 248 501-774 2-254 (257)
302 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-32 3.1E-37 291.0 16.1 245 501-772 2-253 (258)
303 cd05580 STKc_PKA Catalytic dom 100.0 2.2E-32 4.8E-37 295.0 17.8 241 500-772 2-252 (290)
304 PHA02882 putative serine/threo 100.0 1.8E-32 3.9E-37 296.3 16.9 263 495-776 8-294 (294)
305 cd06623 PKc_MAPKK_plant_like C 100.0 7.1E-32 1.5E-36 286.4 21.1 250 501-774 3-256 (264)
306 cd07837 STKc_CdkB_plant Cataly 100.0 2.2E-32 4.8E-37 295.6 17.4 264 500-773 2-290 (295)
307 KOG4250 TANK binding protein k 100.0 9.8E-33 2.1E-37 304.2 14.3 202 501-711 15-230 (732)
308 cd06616 PKc_MKK4 Catalytic dom 100.0 2.7E-32 5.8E-37 294.0 17.5 253 503-774 8-267 (288)
309 cd05633 STKc_GRK3 Catalytic do 100.0 4.5E-32 9.8E-37 290.9 19.0 241 506-774 1-255 (279)
310 cd07860 STKc_CDK2_3 Catalytic 100.0 2.6E-32 5.7E-37 293.4 17.2 260 501-773 2-280 (284)
311 cd07849 STKc_ERK1_2_like Catal 100.0 9.3E-33 2E-37 304.5 14.0 268 499-779 5-299 (336)
312 cd05579 STKc_MAST_like Catalyt 100.0 2.3E-32 4.9E-37 290.1 16.2 246 507-776 1-256 (265)
313 cd05572 STKc_cGK_PKG Catalytic 100.0 6.2E-32 1.3E-36 286.9 19.2 241 507-773 1-251 (262)
314 cd06607 STKc_TAO Catalytic dom 100.0 6.1E-32 1.3E-36 294.1 19.6 245 500-775 16-268 (307)
315 cd05577 STKc_GRK Catalytic dom 100.0 6.6E-32 1.4E-36 289.3 19.3 243 507-773 1-253 (277)
316 cd07843 STKc_CDC2L1 Catalytic 100.0 5.8E-32 1.3E-36 292.2 18.7 262 500-773 6-289 (293)
317 cd07835 STKc_CDK1_like Catalyt 100.0 3.3E-32 7.1E-37 292.4 16.6 259 502-773 2-279 (283)
318 cd07831 STKc_MOK Catalytic dom 100.0 5E-32 1.1E-36 290.7 17.9 257 501-773 1-278 (282)
319 cd07865 STKc_CDK9 Catalytic do 100.0 7.1E-32 1.5E-36 293.7 18.8 266 500-773 13-306 (310)
320 cd06606 STKc_MAPKKK Catalytic 100.0 2.1E-31 4.6E-36 281.3 21.9 249 501-773 2-256 (260)
321 PLN00009 cyclin-dependent kina 100.0 5.1E-32 1.1E-36 292.7 17.2 260 500-773 3-283 (294)
322 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-31 3.6E-36 292.0 21.3 248 501-779 27-282 (317)
323 cd08530 STKc_CNK2-like Catalyt 100.0 8.1E-32 1.7E-36 284.6 18.0 248 501-774 2-253 (256)
324 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-31 3E-36 297.2 20.5 262 498-774 15-311 (353)
325 cd07840 STKc_CDK9_like Catalyt 100.0 6E-32 1.3E-36 290.7 17.1 260 501-773 1-283 (287)
326 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.5E-31 3.2E-36 284.4 19.6 249 500-773 3-260 (264)
327 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-31 3.3E-36 294.9 20.2 266 499-774 7-295 (337)
328 cd08226 PK_STRAD_beta Pseudoki 100.0 1.6E-31 3.5E-36 293.6 19.7 260 505-773 4-307 (328)
329 cd07830 STKc_MAK_like Catalyti 100.0 1.3E-31 2.8E-36 287.8 18.6 262 501-773 1-279 (283)
330 cd06657 STKc_PAK4 Catalytic do 100.0 1E-31 2.2E-36 290.1 17.8 242 505-773 26-269 (292)
331 cd05118 STKc_CMGC Catalytic do 100.0 7.9E-32 1.7E-36 289.2 16.9 258 502-773 2-279 (283)
332 KOG0983 Mitogen-activated prot 100.0 1.2E-32 2.6E-37 270.2 9.4 245 504-773 97-348 (391)
333 KOG1006 Mitogen-activated prot 100.0 1.2E-33 2.6E-38 276.4 2.2 262 489-773 59-326 (361)
334 cd07864 STKc_CDK12 Catalytic d 100.0 1.9E-31 4.1E-36 289.4 19.4 262 496-773 4-298 (302)
335 cd06618 PKc_MKK7 Catalytic dom 100.0 8.9E-32 1.9E-36 291.2 16.8 250 500-774 16-273 (296)
336 cd05583 STKc_MSK_N N-terminal 100.0 1.5E-31 3.3E-36 288.1 18.4 253 501-777 2-266 (288)
337 cd07845 STKc_CDK10 Catalytic d 100.0 1E-31 2.2E-36 292.6 17.0 262 500-774 8-290 (309)
338 KOG0579 Ste20-like serine/thre 100.0 2.3E-32 5E-37 293.7 11.4 248 501-773 34-288 (1187)
339 cd07855 STKc_ERK5 Catalytic do 100.0 2.2E-31 4.9E-36 293.2 19.4 267 499-774 5-294 (334)
340 cd08216 PK_STRAD Pseudokinase 100.0 3.2E-31 7E-36 289.4 20.0 256 504-773 7-294 (314)
341 cd06627 STKc_Cdc7_like Catalyt 100.0 4.4E-31 9.5E-36 278.5 20.3 245 501-773 2-250 (254)
342 cd05611 STKc_Rim15_like Cataly 100.0 4.4E-31 9.4E-36 280.0 20.3 243 505-776 2-250 (260)
343 KOG4645 MAPKKK (MAP kinase kin 100.0 5.5E-33 1.2E-37 322.0 5.5 245 504-773 1240-1493(1509)
344 cd05613 STKc_MSK1_N N-terminal 100.0 3.3E-31 7.2E-36 285.8 19.0 249 501-773 2-267 (290)
345 cd07879 STKc_p38delta_MAPK13 C 100.0 4.7E-31 1E-35 291.6 20.6 264 500-780 16-305 (342)
346 cd08215 STKc_Nek Catalytic dom 100.0 3.6E-31 7.8E-36 279.5 18.9 249 501-773 2-254 (258)
347 cd05606 STKc_beta_ARK Catalyti 100.0 4.1E-31 8.9E-36 283.3 19.5 240 506-773 1-254 (278)
348 cd07838 STKc_CDK4_6_like Catal 100.0 3.8E-31 8.2E-36 284.6 18.9 259 501-773 1-283 (287)
349 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-31 2.3E-36 295.4 14.9 271 501-780 2-297 (330)
350 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-31 3.1E-36 295.2 15.6 267 500-778 6-297 (337)
351 KOG0586 Serine/threonine prote 100.0 1.3E-31 2.8E-36 291.9 14.7 246 497-773 54-305 (596)
352 cd08222 STKc_Nek11 Catalytic d 100.0 3.9E-31 8.4E-36 280.4 16.7 249 500-773 1-256 (260)
353 cd06634 STKc_TAO2 Catalytic do 100.0 6.4E-31 1.4E-35 286.2 18.8 247 499-776 15-269 (308)
354 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-31 4.9E-36 285.1 15.0 248 500-773 2-276 (280)
355 KOG0986 G protein-coupled rece 100.0 6.4E-32 1.4E-36 282.0 9.8 195 504-708 190-389 (591)
356 cd07866 STKc_BUR1 Catalytic do 100.0 5.3E-31 1.2E-35 287.0 17.6 267 499-773 8-307 (311)
357 PTZ00024 cyclin-dependent prot 100.0 4.6E-31 9.9E-36 291.0 17.2 259 503-773 13-312 (335)
358 cd07854 STKc_MAPK4_6 Catalytic 100.0 9E-31 1.9E-35 289.3 19.4 264 499-773 5-299 (342)
359 PHA03390 pk1 serine/threonine- 100.0 1.2E-30 2.6E-35 277.9 19.3 240 501-773 16-261 (267)
360 KOG0666 Cyclin C-dependent kin 100.0 5.8E-32 1.3E-36 269.9 7.9 205 500-708 25-243 (438)
361 cd07829 STKc_CDK_like Catalyti 100.0 9.3E-31 2E-35 280.8 17.8 260 502-773 2-278 (282)
362 KOG1035 eIF-2alpha kinase GCN2 100.0 2.6E-31 5.6E-36 307.0 13.7 245 505-773 485-870 (1351)
363 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.9E-30 4.1E-35 284.9 19.9 259 500-774 11-288 (328)
364 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-30 3.2E-35 286.5 18.7 264 501-773 2-291 (332)
365 cd07880 STKc_p38gamma_MAPK12 C 100.0 2E-30 4.3E-35 286.6 19.6 264 498-779 14-305 (343)
366 cd06633 STKc_TAO3 Catalytic do 100.0 2.2E-30 4.7E-35 282.6 19.7 242 502-774 24-273 (313)
367 KOG1024 Receptor-like protein 100.0 1.1E-31 2.5E-36 275.0 8.6 262 496-778 281-555 (563)
368 KOG0607 MAP kinase-interacting 100.0 3.7E-31 7.9E-36 264.9 11.9 259 493-773 75-360 (463)
369 cd05123 STKc_AGC Catalytic dom 100.0 2E-30 4.3E-35 273.0 16.3 235 507-770 1-240 (250)
370 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-30 2.5E-35 288.8 14.2 260 499-774 17-300 (345)
371 cd05610 STKc_MASTL Catalytic d 100.0 3E-30 6.5E-35 307.4 18.5 143 500-650 5-152 (669)
372 cd07851 STKc_p38 Catalytic dom 100.0 2.6E-30 5.6E-35 285.8 16.4 258 500-773 16-297 (343)
373 KOG1151 Tousled-like protein k 100.0 2.3E-30 4.9E-35 268.5 13.3 268 487-772 451-739 (775)
374 KOG0671 LAMMER dual specificit 100.0 4.7E-31 1E-35 271.6 7.6 272 489-773 79-405 (415)
375 cd05576 STKc_RPK118_like Catal 100.0 9.8E-30 2.1E-34 265.9 15.4 221 510-770 4-225 (237)
376 KOG4236 Serine/threonine prote 100.0 2.5E-30 5.5E-35 273.3 10.8 194 504-708 569-769 (888)
377 KOG0690 Serine/threonine prote 100.0 1.7E-30 3.6E-35 260.4 8.8 198 501-709 170-372 (516)
378 KOG0603 Ribosomal protein S6 k 100.0 4E-30 8.7E-35 281.8 11.3 238 500-774 323-563 (612)
379 KOG0587 Traf2- and Nck-interac 100.0 2.2E-29 4.7E-34 282.7 16.3 251 499-773 19-281 (953)
380 smart00220 S_TKc Serine/Threon 100.0 6.6E-29 1.4E-33 259.2 16.8 237 511-773 1-240 (244)
381 KOG0662 Cyclin-dependent kinas 100.0 4.8E-29 1E-33 230.3 12.9 207 503-720 6-218 (292)
382 PLN03224 probable serine/threo 100.0 1.4E-28 3.1E-33 278.4 19.0 204 498-706 144-434 (507)
383 KOG0696 Serine/threonine prote 100.0 9.4E-30 2E-34 262.1 7.9 205 495-710 345-555 (683)
384 KOG1027 Serine/threonine prote 100.0 2.5E-29 5.5E-34 281.0 11.1 244 505-773 515-766 (903)
385 PLN03225 Serine/threonine-prot 100.0 1.8E-28 3.9E-33 285.0 18.7 258 499-774 132-450 (566)
386 KOG0612 Rho-associated, coiled 100.0 1.5E-29 3.3E-34 290.1 9.5 201 497-707 73-283 (1317)
387 KOG0984 Mitogen-activated prot 100.0 3.2E-29 6.9E-34 237.0 8.7 197 504-708 51-255 (282)
388 KOG1290 Serine/threonine prote 100.0 1.9E-28 4.2E-33 258.6 15.1 155 475-635 53-221 (590)
389 KOG0604 MAP kinase-activated p 100.0 1.2E-28 2.6E-33 245.3 11.5 243 505-775 68-323 (400)
390 KOG0669 Cyclin T-dependent kin 100.0 1.4E-29 3.1E-34 245.8 2.7 267 500-774 18-315 (376)
391 KOG0608 Warts/lats-like serine 99.9 4.5E-28 9.8E-33 261.3 12.7 209 495-711 625-877 (1034)
392 KOG0614 cGMP-dependent protein 99.9 1.1E-28 2.4E-33 260.5 4.9 242 504-773 425-676 (732)
393 KOG0664 Nemo-like MAPK-related 99.9 1E-28 2.2E-33 242.2 2.7 261 504-775 58-344 (449)
394 cd00180 PKc Catalytic domain o 99.9 4E-26 8.8E-31 232.1 19.8 209 507-774 1-214 (215)
395 KOG0695 Serine/threonine prote 99.9 4E-27 8.6E-32 236.8 11.4 244 501-766 252-502 (593)
396 KOG1152 Signal transduction se 99.9 3.9E-27 8.4E-32 252.7 10.3 193 501-706 563-770 (772)
397 KOG1345 Serine/threonine kinas 99.9 1.9E-26 4.1E-31 226.6 12.7 251 500-775 25-285 (378)
398 KOG0670 U4/U6-associated splic 99.9 8.3E-27 1.8E-31 247.0 7.5 213 486-709 419-639 (752)
399 smart00221 STYKc Protein kinas 99.9 3.5E-25 7.7E-30 228.6 18.0 197 502-707 2-202 (225)
400 KOG0668 Casein kinase II, alph 99.9 3.2E-25 7E-30 212.8 10.5 257 499-773 38-321 (338)
401 KOG0576 Mitogen-activated prot 99.9 2.6E-25 5.7E-30 242.6 5.9 249 500-772 16-269 (829)
402 cd00028 B_lectin Bulb-type man 99.9 7.9E-24 1.7E-28 193.8 12.9 110 37-149 2-116 (116)
403 KOG0665 Jun-N-terminal kinase 99.9 7.4E-25 1.6E-29 220.9 6.1 252 506-773 24-309 (369)
404 PLN00181 protein SPA1-RELATED; 99.9 1E-24 2.2E-29 266.5 8.0 198 549-773 27-264 (793)
405 KOG1167 Serine/threonine prote 99.9 1.1E-23 2.3E-28 220.7 11.9 196 501-708 38-281 (418)
406 KOG1165 Casein kinase (serine/ 99.9 9.5E-23 2.1E-27 206.2 14.2 270 500-788 29-309 (449)
407 smart00108 B_lectin Bulb-type 99.9 9.5E-23 2.1E-27 186.1 12.8 109 37-148 2-114 (114)
408 KOG1164 Casein kinase (serine/ 99.9 9.2E-22 2E-26 214.8 21.7 263 500-782 19-301 (322)
409 smart00750 KIND kinase non-cat 99.9 1E-22 2.2E-27 202.3 12.7 166 579-778 1-169 (176)
410 KOG1163 Casein kinase (serine/ 99.9 7.9E-23 1.7E-27 198.1 10.7 265 495-778 11-284 (341)
411 PF01453 B_lectin: D-mannose b 99.9 1.7E-23 3.6E-28 189.7 4.8 89 75-163 1-96 (114)
412 PRK09188 serine/threonine prot 99.9 3.8E-22 8.2E-27 217.0 13.1 174 497-689 16-210 (365)
413 KOG0195 Integrin-linked kinase 99.9 6.5E-23 1.4E-27 201.5 5.4 250 499-779 190-447 (448)
414 COG0515 SPS1 Serine/threonine 99.8 4.3E-19 9.3E-24 193.4 22.4 262 501-774 2-275 (384)
415 PF00954 S_locus_glycop: S-loc 99.8 3.5E-20 7.6E-25 167.7 8.9 110 191-317 1-110 (110)
416 PRK10359 lipopolysaccharide co 99.8 7.5E-20 1.6E-24 185.0 9.8 174 493-699 25-216 (232)
417 KOG0590 Checkpoint kinase and 99.8 2.5E-20 5.5E-25 216.0 5.4 252 504-773 323-584 (601)
418 cd05147 RIO1_euk RIO kinase fa 99.8 1.9E-19 4.2E-24 180.2 10.9 138 504-652 2-167 (190)
419 KOG1240 Protein kinase contain 99.8 7E-20 1.5E-24 210.5 6.5 252 500-778 24-295 (1431)
420 KOG1023 Natriuretic peptide re 99.8 7.4E-19 1.6E-23 194.3 12.0 218 548-781 1-227 (484)
421 PRK12274 serine/threonine prot 99.8 1.2E-18 2.6E-23 172.2 12.0 183 504-706 7-208 (218)
422 cd05145 RIO1_like RIO kinase f 99.8 2.3E-18 5E-23 173.1 12.8 140 504-653 2-168 (190)
423 PF14531 Kinase-like: Kinase-l 99.7 7.6E-18 1.7E-22 175.5 12.4 232 501-765 14-288 (288)
424 PRK10345 hypothetical protein; 99.7 7.3E-17 1.6E-21 163.0 11.7 133 504-649 7-156 (210)
425 KOG0603 Ribosomal protein S6 k 99.7 2.4E-17 5.2E-22 181.8 8.4 185 506-707 1-193 (612)
426 KOG1166 Mitotic checkpoint ser 99.7 6.6E-17 1.4E-21 190.7 12.4 198 495-703 694-901 (974)
427 PRK14879 serine/threonine prot 99.7 1.5E-16 3.2E-21 163.1 10.4 133 505-651 2-143 (211)
428 smart00090 RIO RIO-like kinase 99.7 1.8E-16 3.9E-21 164.3 10.9 140 501-653 30-199 (237)
429 cd05144 RIO2_C RIO kinase fami 99.7 4.6E-16 1E-20 157.7 12.8 135 501-653 17-176 (198)
430 PRK09605 bifunctional UGMP fam 99.6 7.5E-16 1.6E-20 179.8 13.0 134 502-652 336-477 (535)
431 TIGR03724 arch_bud32 Kae1-asso 99.6 8.8E-16 1.9E-20 155.8 11.1 129 506-651 1-138 (199)
432 KOG4158 BRPK/PTEN-induced prot 99.6 1.3E-15 2.8E-20 158.0 11.4 200 551-776 273-512 (598)
433 KOG1033 eIF-2alpha kinase PEK/ 99.6 2E-16 4.3E-21 171.4 3.9 176 568-771 330-509 (516)
434 cd05120 APH_ChoK_like Aminogly 99.6 1.8E-14 3.8E-19 138.6 11.5 135 504-652 3-139 (155)
435 cd05119 RIO RIO kinase family, 99.5 1.3E-14 2.9E-19 145.6 9.4 137 504-653 2-165 (187)
436 PRK01723 3-deoxy-D-manno-octul 99.5 1.2E-13 2.6E-18 143.5 12.5 133 505-651 37-191 (239)
437 KOG0590 Checkpoint kinase and 99.5 2.4E-14 5.3E-19 166.4 3.7 254 500-773 21-285 (601)
438 KOG0606 Microtubule-associated 99.4 9.7E-14 2.1E-18 160.6 4.8 164 503-710 87-263 (1205)
439 PF08276 PAN_2: PAN-like domai 99.4 2.4E-13 5.2E-18 110.1 5.2 64 334-399 1-65 (66)
440 TIGR01982 UbiB 2-polyprenylphe 99.3 5.3E-12 1.2E-16 142.6 11.6 139 505-653 123-308 (437)
441 KOG1266 Protein kinase [Signal 99.3 5.8E-12 1.2E-16 128.5 7.2 156 545-703 118-280 (458)
442 cd05151 ChoK Choline Kinase (C 99.2 2.6E-11 5.6E-16 119.5 9.4 130 505-651 4-136 (170)
443 KOG0601 Cyclin-dependent kinas 99.2 4.8E-11 1E-15 132.6 8.6 253 495-773 110-378 (524)
444 cd01098 PAN_AP_plant Plant PAN 99.2 3.4E-11 7.3E-16 103.6 5.2 77 333-414 4-83 (84)
445 PRK04750 ubiB putative ubiquin 99.1 6.1E-11 1.3E-15 135.4 7.1 140 505-654 125-316 (537)
446 cd00129 PAN_APPLE PAN/APPLE-li 99.1 6.3E-11 1.4E-15 99.0 4.7 71 334-413 5-79 (80)
447 cd05154 ACAD10_11_like Acyl-Co 99.1 6.5E-10 1.4E-14 114.6 10.9 141 505-651 4-206 (223)
448 KOG1243 Protein kinase [Genera 99.0 2.4E-09 5.3E-14 120.1 14.3 166 520-702 34-200 (690)
449 cd05146 RIO3_euk RIO kinase fa 99.0 2.9E-09 6.4E-14 105.8 11.9 136 505-653 3-175 (197)
450 KOG0601 Cyclin-dependent kinas 99.0 6.3E-10 1.4E-14 123.8 7.3 245 500-778 266-518 (524)
451 COG3642 Mn2+-dependent serine/ 98.9 7.2E-09 1.6E-13 99.2 11.0 130 505-651 2-140 (204)
452 KOG3087 Serine/threonine prote 98.9 1.1E-08 2.4E-13 97.2 10.7 143 504-652 12-166 (229)
453 smart00108 B_lectin Bulb-type 98.7 4.1E-08 9E-13 89.5 8.3 86 93-194 24-112 (114)
454 PF01163 RIO1: RIO1 family; I 98.7 7.1E-08 1.5E-12 95.6 10.6 125 514-653 1-157 (188)
455 KOG3741 Poly(A) ribonuclease s 98.7 1.6E-07 3.4E-12 102.4 13.6 170 512-704 289-475 (655)
456 KOG0606 Microtubule-associated 98.7 6.7E-09 1.4E-13 121.3 3.2 242 505-769 810-1084(1205)
457 PRK15123 lipopolysaccharide co 98.7 1.5E-07 3.3E-12 98.9 13.1 132 513-651 36-194 (268)
458 cd00028 B_lectin Bulb-type man 98.7 5.7E-08 1.2E-12 88.9 8.1 84 95-194 26-113 (116)
459 COG4248 Uncharacterized protei 98.6 1.7E-06 3.6E-11 92.1 16.6 262 503-779 15-301 (637)
460 COG0478 RIO-like serine/threon 98.5 7.6E-07 1.6E-11 90.5 9.7 135 501-652 93-252 (304)
461 PF01453 B_lectin: D-mannose b 98.4 2.4E-06 5.2E-11 77.6 9.9 98 47-150 13-114 (114)
462 PF06293 Kdo: Lipopolysacchari 98.4 2.1E-06 4.7E-11 87.2 10.4 107 537-651 54-170 (206)
463 PRK09902 hypothetical protein; 98.3 6.5E-06 1.4E-10 82.1 13.1 137 507-651 26-179 (216)
464 COG0661 AarF Predicted unusual 98.3 1.3E-06 2.7E-11 99.5 9.0 141 505-654 131-317 (517)
465 KOG2137 Protein kinase [Signal 98.2 6.9E-07 1.5E-11 101.2 2.7 101 605-707 105-212 (700)
466 smart00473 PAN_AP divergent su 98.2 4E-06 8.6E-11 70.6 6.4 61 337-401 3-65 (78)
467 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.4E-05 3.1E-10 82.3 11.5 141 505-651 7-182 (226)
468 cd05150 APH Aminoglycoside 3'- 98.0 3.5E-05 7.5E-10 80.7 11.7 142 507-651 6-193 (244)
469 PF06176 WaaY: Lipopolysacchar 98.0 3.7E-05 8E-10 77.0 10.8 140 494-651 26-183 (229)
470 KOG0576 Mitogen-activated prot 98.0 2.6E-06 5.7E-11 95.3 2.6 184 503-706 246-431 (829)
471 PF01636 APH: Phosphotransfera 98.0 3.5E-05 7.5E-10 79.8 10.7 145 505-651 3-197 (239)
472 KOG1235 Predicted unusual prot 97.9 4.1E-05 9E-10 87.0 9.9 141 505-654 167-357 (538)
473 PF12260 PIP49_C: Protein-kina 97.9 2.9E-05 6.3E-10 77.3 6.8 105 542-652 7-112 (188)
474 PLN02876 acyl-CoA dehydrogenas 97.8 0.00012 2.5E-09 90.2 12.7 78 504-581 43-131 (822)
475 PRK10593 hypothetical protein; 97.7 0.00024 5.2E-09 76.5 12.0 76 504-581 19-100 (297)
476 COG1718 RIO1 Serine/threonine 97.7 0.00018 4E-09 72.8 9.9 136 506-653 55-217 (268)
477 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00015 3.3E-09 75.4 9.9 73 505-582 3-82 (235)
478 cd05157 ETNK_euk Ethanolamine 97.7 0.0002 4.4E-09 74.4 10.3 73 505-581 4-79 (235)
479 PF10707 YrbL-PhoP_reg: PhoP r 97.5 0.00096 2.1E-08 66.8 12.2 130 505-649 7-170 (199)
480 COG2112 Predicted Ser/Thr prot 97.4 0.00072 1.6E-08 64.8 9.0 128 503-651 26-155 (201)
481 TIGR02721 ycfN_thiK thiamine k 97.4 0.00067 1.4E-08 71.6 9.5 139 506-651 3-175 (256)
482 PRK09550 mtnK methylthioribose 97.3 0.0016 3.6E-08 72.2 11.9 74 505-580 32-117 (401)
483 cd05156 ChoK_euk Choline Kinas 97.3 0.00083 1.8E-08 72.8 9.0 143 505-651 4-213 (302)
484 PF13095 FTA2: Kinetochore Sim 97.3 0.0017 3.6E-08 64.5 9.9 124 499-649 37-206 (207)
485 cd01100 APPLE_Factor_XI_like S 97.2 0.00046 9.9E-09 57.2 4.4 53 340-396 6-58 (73)
486 cd05153 HomoserineK_II Homoser 97.0 0.0036 7.8E-08 67.5 10.8 143 505-650 20-204 (296)
487 PRK05231 homoserine kinase; Pr 97.0 0.0051 1.1E-07 67.2 11.6 143 505-650 28-216 (319)
488 PF03881 Fructosamin_kin: Fruc 97.0 0.0028 6.1E-08 67.5 8.8 73 504-579 22-97 (288)
489 TIGR00938 thrB_alt homoserine 96.8 0.013 2.8E-07 63.6 12.7 144 505-650 28-216 (307)
490 KOG2268 Serine/threonine prote 96.6 0.0011 2.4E-08 69.3 2.7 134 501-652 94-252 (465)
491 PLN02236 choline kinase 96.6 0.0096 2.1E-07 65.6 9.7 142 506-651 43-231 (344)
492 KOG1035 eIF-2alpha kinase GCN2 96.5 0.0096 2.1E-07 72.1 9.6 196 541-775 229-435 (1351)
493 cd05152 MPH2' Macrolide 2'-Pho 96.5 0.012 2.7E-07 62.6 9.3 32 621-652 185-217 (276)
494 KOG1826 Ras GTPase activating 96.0 0.0027 5.9E-08 78.2 1.6 161 542-706 1277-1441(2724)
495 COG3173 Predicted aminoglycosi 96.0 0.039 8.4E-07 59.3 10.1 140 513-654 39-231 (321)
496 COG2334 Putative homoserine ki 95.9 0.061 1.3E-06 58.4 11.1 141 507-650 34-227 (331)
497 PF01633 Choline_kinase: Choli 95.9 0.015 3.3E-07 59.2 6.2 125 523-651 2-174 (211)
498 TIGR02904 spore_ysxE spore coa 95.8 0.04 8.7E-07 59.8 9.6 32 620-651 195-226 (309)
499 TIGR02906 spore_CotS spore coa 95.7 0.067 1.5E-06 58.1 10.9 30 620-650 186-215 (313)
500 PLN02421 phosphotransferase, a 95.5 0.051 1.1E-06 59.5 9.2 143 505-651 20-213 (330)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-55 Score=475.31 Aligned_cols=289 Identities=45% Similarity=0.786 Sum_probs=256.3
Q ss_pred CCcccCHHHHHHhccccc--ccccccccceEEEEEECCCcEEEEEEecCcccc-hHHHHHHHHHhhcccccceeeeeeee
Q 003059 487 APVQFSYKELQRSTKGFK--DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG-EKQFRMEVATISSTHHLNLVRLVGFS 563 (852)
Q Consensus 487 ~~~~~~~~el~~~~~~~~--~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-~~~f~~E~~~l~~l~h~niv~l~g~~ 563 (852)
....|++.||..+|.+|. +.||+|+||.||+|.+.+++.||||++...... .++|.+|++++.+++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 466799999999999998 589999999999999999999999999855444 67799999999999999999999999
Q ss_pred ccCc-eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceE
Q 003059 564 SEGK-HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAK 642 (852)
Q Consensus 564 ~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 642 (852)
.+.+ +++||||||++|+|+++|+..... +|+|.+|++||.++|+||+|||+.+.+.||||||||+|||||+++++|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999 599999999999999999875432 789999999999999999999999888999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeee-cCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH
Q 003059 643 VSDFGLAKLINPKDHRHRTLTSV-RGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 643 l~DFGla~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 721 (852)
|+|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||+|+||+||+.+.+.........+..|+.
T Consensus 218 lsDFGLa~~~~~~---~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 218 LSDFGLAKLGPEG---DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred ccCccCcccCCcc---ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 9999999765431 1111222 89999999999999999999999999999999999999998766555666999999
Q ss_pred HHHhhCCcccccccccCCCCCCH-HHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDI-EQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~-~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
..+.++.+.+++|+.+.....+. +++.++++++++|++.+|.+||+|.||+++|+.+...
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 99999999999999987434444 7899999999999999999999999999999766543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-45 Score=397.80 Aligned_cols=254 Identities=35% Similarity=0.516 Sum_probs=209.3
Q ss_pred ccccccccccceEEEEEECCCcEEEEEEecCcccc---hHHHHHHHHHhhcccccceeeeeeeeccCc-eeeEEEeecCC
Q 003059 503 FKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG---EKQFRMEVATISSTHHLNLVRLVGFSSEGK-HRLLVYEFMKN 578 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~f~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lV~e~~~~ 578 (852)
+.+.||+|+||+||+|.+++...||||++...... .++|.+|+.+|.+++|||||+|+|+|.+.. ..+||||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 44569999999999999988777999999844322 558999999999999999999999999988 79999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCC-cccCCCCCCceEeCCCC-ceEEeecccccccCCCC
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDC-IVHCDIKPENILLDENY-NAKVSDFGLAKLINPKD 656 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~~ 656 (852)
|+|.++|+.. ....+++..+++|+.|||+||.|||+ .+ ||||||||+||||+.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 125 GSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999864 24579999999999999999999999 55 99999999999999997 99999999998765321
Q ss_pred CcceeeeeecCCCCCCChhhhh--cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLA--NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~--~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
...+...||..|||||++. ...++.|+||||||++||||+||+.||....... .+......+. .
T Consensus 199 ---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~------~~~~v~~~~~-----R 264 (362)
T KOG0192|consen 199 ---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ------VASAVVVGGL-----R 264 (362)
T ss_pred ---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcCC-----C
Confidence 2334478999999999999 6699999999999999999999999998654311 0111111111 1
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
+ ..+.+....+..++.+||+.||..||++.+|+..|+.+...
T Consensus 265 p-----~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 265 P-----PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred C-----CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 1 11222445677788889999999999999999999987653
No 3
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-45 Score=390.76 Aligned_cols=263 Identities=30% Similarity=0.444 Sum_probs=220.1
Q ss_pred HHHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 494 KELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 494 ~el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
.++.+...++.++||+|.||.||.|.+++...||+|.++......+.|.+|+++|++|+|+|||+++|+|..++.+||||
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 35566667788899999999999999999889999999977777889999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
|||+.|+|.+||... .+..+...+.+.++.|||+||+||++ +++|||||.++||||+++..+||+|||||+...
T Consensus 281 E~m~~GsLl~yLr~~---~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTR---EGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EecccCcHHHHhhhc---CCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccC
Confidence 999999999999752 35678899999999999999999999 899999999999999999999999999999544
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
.+ .........-++.|.|||.+....++.|||||||||+||||+| |+.||......+ +.+.+.++.
T Consensus 355 d~--~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-------v~~~le~Gy---- 421 (468)
T KOG0197|consen 355 DD--EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-------VLELLERGY---- 421 (468)
T ss_pred CC--ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-------HHHHHhccC----
Confidence 32 2223334456789999999999999999999999999999999 899987553221 222222221
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
++ +.+......+.+++..||+.+|++|||++.+...|+.+...
T Consensus 422 ---Rl---p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 422 ---RL---PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ---cC---CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 11 22333445666788889999999999999999999887653
No 4
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=360.22 Aligned_cols=198 Identities=27% Similarity=0.486 Sum_probs=176.5
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.|.+.++||+|.|++||+|+++ ++.+||||.+... ....+.+..|+++|+.++|||||+|++++...+..||||||
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEy 90 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEY 90 (429)
T ss_pred cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEe
Confidence 4566778999999999999964 5789999999743 33445678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC------CceEEeecccc
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN------YNAKVSDFGLA 649 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~------~~~kl~DFGla 649 (852)
|.+|+|.+||+... .+++.....++.|||.||++||+ ++||||||||+||||+.. -.+||+|||+|
T Consensus 91 C~gGDLs~yi~~~~-----~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 91 CNGGDLSDYIRRRG-----RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred CCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999997654 58999999999999999999999 899999999999999764 46899999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccc
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQ 709 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~ 709 (852)
+.+.+. .......|++-|||||+++..+|+.|+|+||+|++|||+++|+.||+...
T Consensus 163 R~L~~~----~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 163 RFLQPG----SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhCCch----hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 998643 23456789999999999999999999999999999999999999998554
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=356.58 Aligned_cols=255 Identities=28% Similarity=0.409 Sum_probs=206.8
Q ss_pred ccCHHHHHHhcccccccccccccceEEEEEEC-CCcEEEEEEec--CcccchHHHHHHHHHhhcccccceeeeeeeeccC
Q 003059 490 QFSYKELQRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLE--GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEG 566 (852)
Q Consensus 490 ~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~--~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~ 566 (852)
..+..||++ .+.||+|..|+|||+.++ +++.+|+|.+. ......+++.+|++++++.+|||||.++|.|...
T Consensus 75 ~i~~~dle~-----~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~ 149 (364)
T KOG0581|consen 75 GISLSDLER-----LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN 149 (364)
T ss_pred ccCHHHhhh-----hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC
Confidence 355556554 467999999999999975 57889999995 3445568899999999999999999999999998
Q ss_pred c-eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEee
Q 003059 567 K-HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSD 645 (852)
Q Consensus 567 ~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 645 (852)
+ ...|+||||.+|||++++... ..+++...-+|+.++++||.|||++ ++||||||||+||||+..|++||+|
T Consensus 150 ~~~isI~mEYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicD 222 (364)
T KOG0581|consen 150 GEEISICMEYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICD 222 (364)
T ss_pred CceEEeehhhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEecc
Confidence 8 599999999999999999643 3488999999999999999999964 7899999999999999999999999
Q ss_pred cccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh
Q 003059 646 FGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
||.++.+.. .......||..|||||.+.+..|+.++||||||++++|+.+|+.||..........+..
T Consensus 223 FGVS~~lvn-----S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L------- 290 (364)
T KOG0581|consen 223 FGVSGILVN-----SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL------- 290 (364)
T ss_pred ccccHHhhh-----hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH-------
Confidence 999987643 24567889999999999999999999999999999999999999997642211111110
Q ss_pred hCCcccccccccCCCCCCH-HHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 KGNVKGIVDKSLAGEDVDI-EQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~-~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+..+++..-. ..+. ....++..++-.|+++||.+||++.|+++
T Consensus 291 ---l~~Iv~~ppP--~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 291 ---LCAIVDEPPP--RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ---HHHHhcCCCC--CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1112221111 1111 24456778888899999999999999986
No 6
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-43 Score=397.80 Aligned_cols=267 Identities=30% Similarity=0.462 Sum_probs=220.8
Q ss_pred HHHHHHhcccccccccccccceEEEEEEC------CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeec
Q 003059 493 YKELQRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSS 564 (852)
Q Consensus 493 ~~el~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~ 564 (852)
..++.+....+.++||+|+||.||+|+.. +...||||.++.. .+..++|++|+++++.++|||||+|+|.|.
T Consensus 480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 44666677778899999999999999843 3568999999843 336789999999999999999999999999
Q ss_pred cCceeeEEEeecCCCCHHHHhhhcccC-----C----ccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe
Q 003059 565 EGKHRLLVYEFMKNGSLDNFLFANEEG-----S----GKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 565 ~~~~~~lV~e~~~~gsL~~~l~~~~~~-----~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl 635 (852)
+++..+||+|||..|+|.+||...... . ..+|+..+.+.||.|||.||+||-+ +.+|||||..+|+||
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLV 636 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---Ccccccchhhhhcee
Confidence 999999999999999999999754331 1 2349999999999999999999998 889999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccch
Q 003059 636 DENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRK 714 (852)
Q Consensus 636 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~ 714 (852)
.++..+||+||||+|.....++.. ...+..-+++|||||.+..++||.+||||||||+|||+++ |+.||.....++
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYYk-~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-- 713 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYYK-VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-- 713 (774)
T ss_pred ccceEEEecccccchhhhhhhhhc-ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH--
Confidence 999999999999999876554432 2223445789999999999999999999999999999998 999997554321
Q ss_pred hhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 715 KFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 715 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
+.+.+..+.+. +.+.....++..|++.||+.+|++||+++||-.+|+...+
T Consensus 714 -----VIe~i~~g~lL----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 714 -----VIECIRAGQLL----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred -----HHHHHHcCCcc----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 33334444331 2333445577888999999999999999999999987654
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.7e-42 Score=370.81 Aligned_cols=246 Identities=27% Similarity=0.378 Sum_probs=208.8
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecC----cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG----IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~----~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
.+|...+.||+|||+.||+++. ..|..||+|++.+ .....+...+||++.+.|+|||||+++++|++.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5677788999999999999997 8899999999974 3445677899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
|+|++++|..++.. .+++++.+++.+..||+.||.|||+ ++|||||||..|+||++++++||+|||||..+.
T Consensus 98 ELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred EecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeec
Confidence 99999999999863 4579999999999999999999999 899999999999999999999999999999886
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.++. ......||+.|+|||++.....+..+||||+|||||-||.|++||+...-. ..+..+...
T Consensus 170 ~~~E---rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk-------ety~~Ik~~------ 233 (592)
T KOG0575|consen 170 YDGE---RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK-------ETYNKIKLN------ 233 (592)
T ss_pred Cccc---ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH-------HHHHHHHhc------
Confidence 5432 234678999999999999999999999999999999999999999854311 112222211
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+......+.+++..+|+.||.+||++.+|+.
T Consensus 234 -----~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 234 -----EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -----CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11222233345677888899999999999999984
No 8
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=382.43 Aligned_cols=262 Identities=31% Similarity=0.479 Sum_probs=220.4
Q ss_pred HHHHhcccccccccccccceEEEEEECC----CcEEEEEEec--CcccchHHHHHHHHHhhcccccceeeeeeeeccCce
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLAN----RTVVAVKQLE--GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKH 568 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~--~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~ 568 (852)
||..+...+.+.||.|.||.|++|.++- ...||||.++ ..+....+|..|+.||.++.||||++|.|+.+..+.
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P 704 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP 704 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence 5666666777899999999999999742 4579999999 345567889999999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.+||.|||+||+|+.||..+. ..+++-+...++++||.||+||.+ .++|||||.++||||+.+..+|++|||+
T Consensus 705 vMIiTEyMENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccc
Confidence 999999999999999997654 248899999999999999999999 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKG 727 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (852)
+|.+..+...........-+++|.|||.+...+++.++||||||+||||.++ |.+||-.....+ +...++++
T Consensus 778 SRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-------VIkaIe~g 850 (996)
T KOG0196|consen 778 SRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VIKAIEQG 850 (996)
T ss_pred eeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-------HHHHHHhc
Confidence 9988665433333334445789999999999999999999999999999997 999985433211 11111111
Q ss_pred CcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 728 NVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 728 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
-+| +.+++....+.+|+++||++|-.+||++.+|+..|+++..
T Consensus 851 -------yRL---PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 851 -------YRL---PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred -------cCC---CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 122 5677778889999999999999999999999999998753
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-42 Score=353.56 Aligned_cols=255 Identities=27% Similarity=0.353 Sum_probs=203.8
Q ss_pred HHHHhcccccccccccccceEEEEEE-CCCcEEEEEEecCcc--------cchHHHHHHHHHhhcccccceeeeeeeecc
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE--------QGEKQFRMEVATISSTHHLNLVRLVGFSSE 565 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~ 565 (852)
+..+..|-+.+.||+|+||.|-+|.. ++++.||||+++... ......++|+++|++|+|||||++++++.+
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV 247 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence 33556777889999999999999985 568999999997321 122345799999999999999999999999
Q ss_pred CceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC---CceE
Q 003059 566 GKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN---YNAK 642 (852)
Q Consensus 566 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~k 642 (852)
.+..||||||++||.|.+++..+. .+.+..-..+++|++.|+.|||+ .||+||||||+|||+..+ ..+|
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk-----~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llK 319 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANK-----YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLK 319 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhcc-----ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEE
Confidence 999999999999999999997654 36777778899999999999999 899999999999999765 7899
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCC--CC-CCccchhhhHHHHHHHhCCccccccccccchhhHHH
Q 003059 643 VSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLP--IT-SKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLW 719 (852)
Q Consensus 643 l~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s-~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~ 719 (852)
|+|||+|+.... ...+....||+.|.|||++.... +. .+.|+||+||+||-+++|.+||........
T Consensus 320 ItDFGlAK~~g~----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s------ 389 (475)
T KOG0615|consen 320 ITDFGLAKVSGE----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS------ 389 (475)
T ss_pred ecccchhhcccc----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc------
Confidence 999999998753 34667789999999999997654 33 488999999999999999999975432210
Q ss_pred HHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 720 AYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+.+..++.... ...-.+-.++.++++-++|..||++||++.|+++.
T Consensus 390 l~eQI~~G~y~f~-------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 390 LKEQILKGRYAFG-------PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred HHHHHhcCccccc-------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 1122222221110 01122344678899999999999999999999863
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-42 Score=338.57 Aligned_cols=257 Identities=24% Similarity=0.362 Sum_probs=206.1
Q ss_pred hcccccccccccccceEEEEE-ECCCcEEEEEEec---CcccchHHHHHHHHHhhcccccceeeeee-eeccCce-eeEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLE---GIEQGEKQFRMEVATISSTHHLNLVRLVG-FSSEGKH-RLLV 572 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~---~~~~~~~~f~~E~~~l~~l~h~niv~l~g-~~~~~~~-~~lV 572 (852)
+.|.+.++||+|.||+|||+. +.++..||.|.++ .+....++...|+.+|++|+|||||++++ -+.++.+ .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 446677899999999999998 6789999999987 23345577899999999999999999999 4555555 8999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCC-CcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRD-CIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
|||+..|+|...+..... .++.++++.+++++.|++.||.++|...++ -|+||||||.||+|+.+|.+||+|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999965443 467899999999999999999999986543 389999999999999999999999999999
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
+.... ......+|||.||+||.++...|+.|+||||+||++|||+.-+.||.+.. +. -....+..++..
T Consensus 178 l~s~~---tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n------~~-~L~~KI~qgd~~- 246 (375)
T KOG0591|consen 178 LSSKT---TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN------LL-SLCKKIEQGDYP- 246 (375)
T ss_pred hcchh---HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc------HH-HHHHHHHcCCCC-
Confidence 86532 22345789999999999999999999999999999999999999997542 11 112223333211
Q ss_pred ccccccCCCCCC-HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 732 IVDKSLAGEDVD-IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 732 ~~d~~l~~~~~~-~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
+.+ ......+.+++..|+..||+.||+.-.+++.+.
T Consensus 247 ---------~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 247 ---------PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ---------CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 122 334456777888899999999999655554443
No 11
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=344.08 Aligned_cols=271 Identities=28% Similarity=0.417 Sum_probs=200.7
Q ss_pred ccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhh--cccccceeeeeeeeccCc----eeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATIS--STHHLNLVRLVGFSSEGK----HRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~--~l~h~niv~l~g~~~~~~----~~~lV~e 574 (852)
..+.+.||+|+||.||||.+.+ +.||||++. .+..+.|++|-+|.+ .++|+||+++++.-.... +++||+|
T Consensus 212 l~l~eli~~Grfg~V~KaqL~~-~~VAVKifp--~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLDN-RLVAVKIFP--EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhhHHHhhcCccceeehhhccC-ceeEEEecC--HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 4467899999999999999966 789999998 334456777666655 578999999999876555 8999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhcccc------CCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEEC------RDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
|.++|||.+||.. ..++|....+|+..+++||+|||++. +++|+|||||++||||.+|+.+.|+|||+
T Consensus 289 fh~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 289 FHPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 9999999999964 45999999999999999999999875 45799999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCC-CC-----CCccchhhhHHHHHHHhCCcccc-ccccccchhhHHH--
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLP-IT-----SKSDVYSYGMVLLEIVSGRRNFE-VSQETNRKKFSLW-- 719 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-----~ksDv~s~Gvvl~elltG~~p~~-~~~~~~~~~l~~~-- 719 (852)
|..+.+..... .....+||.+|||||++.+.. +. .+.||||+|.|||||++.-.-++ ...++....+...
T Consensus 363 Al~~~p~~~~~-d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 363 ALRLEPGKPQG-DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eEEecCCCCCc-chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 99887654333 333478999999999997652 22 46899999999999998553332 1111111110000
Q ss_pred ---HHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 720 ---AYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 720 ---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
..+.+.+-.+.+...+.+......-..+..+.+.+..||+.||+.|-|+.=|.+++.++...
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 00111111111112222222222224556678888999999999999999999999887643
No 12
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=355.12 Aligned_cols=265 Identities=26% Similarity=0.427 Sum_probs=207.1
Q ss_pred CHHHHHHhcccccccccccccceEEEEEECCCcEEEEEEecC---cccchHHHHHHHHHhhcccccceeeeeeeeccCce
Q 003059 492 SYKELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEG---IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKH 568 (852)
Q Consensus 492 ~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~---~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~ 568 (852)
.+.||......+.++||+|.||+||+|.+.+ .||||+++. ..+..+.|++|+.++++-+|.||+-+.|||.....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 4456666666778899999999999999865 399999983 33456789999999999999999999999999888
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.||..+|+|.+|..+|+..+ ..++..+.++||+|||+|+.|||. ++|||||||..||+|.+++.+||+||||
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred -eeeehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccc
Confidence 99999999999999997653 458888999999999999999999 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhc---CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLAN---LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
+..-..- ..........|...|||||+++. .+|++.+||||||+|+|||++|..||.....+..-. ...
T Consensus 535 atvk~~w-~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIif-------mVG 606 (678)
T KOG0193|consen 535 ATVKTRW-SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIF-------MVG 606 (678)
T ss_pred eeeeeee-ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEE-------Eec
Confidence 9754321 11122233457888999999974 478999999999999999999999998432211100 001
Q ss_pred hCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
.+. +.+.+. .........+.+|+..||..++++||.+.+|+..|+.+..
T Consensus 607 rG~----l~pd~s--~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 607 RGY----LMPDLS--KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccc----cCccch--hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 110 011110 0111223345566777999999999999999998887764
No 13
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-39 Score=375.97 Aligned_cols=269 Identities=30% Similarity=0.440 Sum_probs=217.6
Q ss_pred HHHHHHhcccccccccccccceEEEEEECC--C----cEEEEEEecC--cccchHHHHHHHHHhhcccccceeeeeeeec
Q 003059 493 YKELQRSTKGFKDKLGAGGFGAVYRGVLAN--R----TVVAVKQLEG--IEQGEKQFRMEVATISSTHHLNLVRLVGFSS 564 (852)
Q Consensus 493 ~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~--~----~~vavK~l~~--~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~ 564 (852)
+.++......+.+.||+|+||.||+|.+.+ + ..||||.++. ..+...+|.+|..+|+.++|||||+++|+|.
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 445566677788899999999999999643 3 3499999984 4667789999999999999999999999999
Q ss_pred cCceeeEEEeecCCCCHHHHhhhccc--CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceE
Q 003059 565 EGKHRLLVYEFMKNGSLDNFLFANEE--GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAK 642 (852)
Q Consensus 565 ~~~~~~lV~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 642 (852)
+....+|++|||++|+|..||...+. .....|+....+.++.|||+|+.|||+ +++|||||.++|+||++...+|
T Consensus 766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEE
Confidence 99999999999999999999976532 124578999999999999999999999 8899999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHH
Q 003059 643 VSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 643 l~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 721 (852)
|+|||||+.+...++.. ......-..+|||||.+..+.++.|+|||||||+||||+| |..||......+ +.
T Consensus 843 IaDFGlArDiy~~~yyr-~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-------v~ 914 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYR-KHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-------VL 914 (1025)
T ss_pred EcccchhHhhhhchhee-ccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-------HH
Confidence 99999999665443322 1122345678999999999999999999999999999999 889997543211 11
Q ss_pred HHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCC
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIE 782 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~ 782 (852)
..+.++- +| +.+......+.+++..||+.+|++||++..|++.+..+....
T Consensus 915 ~~~~~gg-------RL---~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 915 LDVLEGG-------RL---DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHhCC-------cc---CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 1111111 22 233444556778999999999999999999999888776443
No 14
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=330.77 Aligned_cols=280 Identities=22% Similarity=0.323 Sum_probs=215.1
Q ss_pred CcccCHHHHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCc
Q 003059 488 PVQFSYKELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK 567 (852)
Q Consensus 488 ~~~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~ 567 (852)
..++-...-...+..+.+.||+|.||.||+|.++++ .||||++...++....-+.|+.....|+|+||+.+++.-..+.
T Consensus 200 GlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wrGe-~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 200 GLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWRGE-DVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDN 278 (513)
T ss_pred CchhHhHHhhhheeEEEEEecCccccceeeccccCC-ceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence 344444555566778899999999999999999765 5999999855443333344444455679999999999865443
Q ss_pred ----eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccc-----cCCCcccCCCCCCceEeCCC
Q 003059 568 ----HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEE-----CRDCIVHCDIKPENILLDEN 638 (852)
Q Consensus 568 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~ivH~Dlkp~NILl~~~ 638 (852)
+.+||.+|.++|||.|||.. ..++.+..++++..+|.||+|||.+ .++.|.|||||++||||..+
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn 352 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 352 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence 78999999999999999953 4689999999999999999999975 35779999999999999999
Q ss_pred CceEEeecccccccCCCC-CcceeeeeecCCCCCCChhhhhcCC------CCCCccchhhhHHHHHHHh-----C-----
Q 003059 639 YNAKVSDFGLAKLINPKD-HRHRTLTSVRGTRGYLAPEWLANLP------ITSKSDVYSYGMVLLEIVS-----G----- 701 (852)
Q Consensus 639 ~~~kl~DFGla~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~------~s~ksDv~s~Gvvl~ellt-----G----- 701 (852)
+.+.|+|+|||....... ......+..+||.+|||||++...- .-..+||||||.|+||+.. |
T Consensus 353 ~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 999999999998765542 2223344577999999999985431 2247899999999999985 2
Q ss_pred CccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 702 RRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 702 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
+.||....+.+.. .+.+.+-...+.+.+.++....+.+.+..+.+++..||..+|..|-|+-.|.+.|.++.+
T Consensus 433 ~~Pyyd~Vp~DPs------~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 433 QLPYYDVVPSDPS------FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cCCcccCCCCCCC------HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 3566544332221 223333333444555566556677889999999999999999999999999999888764
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-39 Score=336.42 Aligned_cols=254 Identities=28% Similarity=0.400 Sum_probs=198.2
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCc--eeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK--HRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lV~e~ 575 (852)
.+...+.||+|.||+||++...+ +...|||.+... ....+.+++|+.+|.+++|||||+.+|...... .+++.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 34556789999999999999654 889999998743 122566899999999999999999999855544 68999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeecccccccCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKLINP 654 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~ 654 (852)
+++|+|.+++.... + .|++..+.++++||++||+|||+ ++||||||||+||||+. ++.+||+|||+++....
T Consensus 98 ~~~GsL~~~~~~~g---~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 98 APGGSLSDLIKRYG---G-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred cCCCcHHHHHHHcC---C-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999996543 2 59999999999999999999998 89999999999999999 79999999999987764
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
............||+.|||||++..+ ...+++|||||||++.||+||+.||..... ...+..........
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~-----~~~~~~~ig~~~~~---- 241 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE-----EAEALLLIGREDSL---- 241 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc-----hHHHHHHHhccCCC----
Confidence 22222334457899999999999953 344699999999999999999999975310 01111111111111
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
+. .+..-.....+++..|+..+|++|||+.++++..
T Consensus 242 -P~-----ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 242 -PE-----IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred -CC-----CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 11 1112233566778889999999999999998754
No 16
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-39 Score=331.02 Aligned_cols=240 Identities=25% Similarity=0.325 Sum_probs=195.5
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
..+.+.+.||+|+||.||.++. +.++.+|+|.+++.. ...+...+|..+|.+++||.||+++-.|.+.+..|||+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 3456678999999999999985 458899999997432 34566789999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+.||.|..+|.+.. .+++..+.-++.+|+.||.|||+ ++||||||||+|||||++|+++|+|||+++...
T Consensus 105 d~~~GGeLf~hL~~eg-----~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 105 DYLNGGELFYHLQREG-----RFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred eccCCccHHHHHHhcC-----CcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 9999999999996543 48888888899999999999999 899999999999999999999999999999654
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
... .......||+.|||||++.+..++..+|.||+|+++|||++|.+||...+... ..+.+..++
T Consensus 177 ~~~---~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~-------~~~~I~~~k----- 241 (357)
T KOG0598|consen 177 KDG---DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK-------MYDKILKGK----- 241 (357)
T ss_pred cCC---CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH-------HHHHHhcCc-----
Confidence 322 23344789999999999999999999999999999999999999997654211 112222222
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCC
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP 766 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP 766 (852)
+. ..+.--...+.+++...+..||++|-
T Consensus 242 ---~~--~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 ---LP--LPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---CC--CCCccCCHHHHHHHHHHhccCHHHhc
Confidence 10 11111223556777789999999995
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1e-38 Score=352.35 Aligned_cols=265 Identities=28% Similarity=0.413 Sum_probs=203.9
Q ss_pred HHHhcccccccccccccceEEEEEE------CCCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeeeccC
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVL------ANRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFSSEG 566 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~ 566 (852)
+....+.+.++||+|+||.||+|.. ..++.||||++... ....+.+.+|+.++.++ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3445678889999999999999974 23467999998743 23345789999999999 899999999988764
Q ss_pred -ceeeEEEeecCCCCHHHHhhhcccC------------------------------------------------------
Q 003059 567 -KHRLLVYEFMKNGSLDNFLFANEEG------------------------------------------------------ 591 (852)
Q Consensus 567 -~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------ 591 (852)
...++||||+++|+|.+++......
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4689999999999999999653210
Q ss_pred ---CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCC
Q 003059 592 ---SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGT 668 (852)
Q Consensus 592 ---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt 668 (852)
....+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++........ .......++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~ 239 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-VRKGSARLP 239 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcch-hcccCCCCC
Confidence 02358888999999999999999998 89999999999999999999999999999865432111 111233467
Q ss_pred CCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHH
Q 003059 669 RGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQV 747 (852)
Q Consensus 669 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 747 (852)
..|+|||.+.+..++.++||||||+++|||++ |+.||....... . .......+... . .+....
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~----~~~~~~~~~~~-----~-----~~~~~~ 303 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--E----FCQRLKDGTRM-----R-----APENAT 303 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--H----HHHHHhcCCCC-----C-----CCCCCC
Confidence 88999999999999999999999999999997 999997543211 0 11111111110 0 011122
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 748 MRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 748 ~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
..+.+++.+|++.||.+||++.+|++.|+.+..
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 356788999999999999999999999987653
No 18
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=329.73 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=204.3
Q ss_pred HhcccccccccccccceEEEEE-ECCCcEEEEEEec--CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLE--GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~--~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
...|++.+.||.|..++||+|. .+.+..||||++. +.....+.+.+|+..|+.++||||++.+..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3468889999999999999998 4567899999997 333446789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
||.+||+.+.+...-. ..+++..+..|++++++||.|||. +|.||||||+.||||+.+|.+||+|||..-.+..
T Consensus 105 fMa~GS~ldIik~~~~---~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP---DGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred hhcCCcHHHHHHHHcc---ccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 9999999999976543 338899999999999999999999 8999999999999999999999999998765544
Q ss_pred CCCcceee-eeecCCCCCCChhhhhc--CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 655 KDHRHRTL-TSVRGTRGYLAPEWLAN--LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 655 ~~~~~~~~-~~~~gt~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
........ ....||+.|||||+++. ..|+.|+||||||++..||.+|..||....+... ....+ .+....
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv------Ll~tL-qn~pp~ 251 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV------LLLTL-QNDPPT 251 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH------HHHHh-cCCCCC
Confidence 33333333 66789999999999643 4689999999999999999999999975543211 00111 111110
Q ss_pred ccccccCCCCCCHHH----HHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQ----VMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~----~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. .. ..+.++ -..+.+++..|++.||.+|||++++++
T Consensus 252 ~~---t~--~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 252 LL---TS--GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cc---cc--cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00 00 111121 124667777899999999999999875
No 19
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=352.58 Aligned_cols=266 Identities=28% Similarity=0.417 Sum_probs=210.6
Q ss_pred HHHHHHhcccccccccccccceEEEEEECC--C---cEEEEEEecC----cccchHHHHHHHHHhhcccccceeeeeeee
Q 003059 493 YKELQRSTKGFKDKLGAGGFGAVYRGVLAN--R---TVVAVKQLEG----IEQGEKQFRMEVATISSTHHLNLVRLVGFS 563 (852)
Q Consensus 493 ~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~--~---~~vavK~l~~----~~~~~~~f~~E~~~l~~l~h~niv~l~g~~ 563 (852)
-.||......+.++||+|+||.||+|.+.. + ..||||..+. ......+|.+|++++++++|||||+++|++
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 356777777788999999999999999643 2 2389999884 244567899999999999999999999999
Q ss_pred ccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEE
Q 003059 564 SEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKV 643 (852)
Q Consensus 564 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 643 (852)
......|||||+|+||+|++||.+... .++..++++++.++|.||+|||+ +++|||||.++|+|++.++.+||
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~----~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKK----SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEe
Confidence 999999999999999999999976532 58999999999999999999999 89999999999999999999999
Q ss_pred eecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHH
Q 003059 644 SDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYE 722 (852)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~ 722 (852)
+|||+++.-.. .........-+.+|+|||.+....++.++|||||||++||+.+ |..||....... +..
T Consensus 304 SDFGLs~~~~~---~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~-------v~~ 373 (474)
T KOG0194|consen 304 SDFGLSRAGSQ---YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE-------VKA 373 (474)
T ss_pred CccccccCCcc---eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH-------HHH
Confidence 99999875431 1111112246789999999999999999999999999999999 889997654321 111
Q ss_pred HHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCCCC
Q 003059 723 EFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIEKP 784 (852)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~~~ 784 (852)
.+.... -+. ..+......+..++..|+..+|++||+|.+|.+.|+.+.....+
T Consensus 374 kI~~~~------~r~---~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 374 KIVKNG------YRM---PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHhcC------ccC---CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 110100 011 11112233444555689999999999999999999988765444
No 20
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=332.74 Aligned_cols=249 Identities=25% Similarity=0.373 Sum_probs=202.0
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~ 573 (852)
.+.|.+.||+|.|++|++|+. ..++.+|||++.+. +...+-...|-++|.+| .||.|++|+--|.+....|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 456789999999999999994 56899999999743 23344567788889999 8999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+++|+|.++|.+.. .+++.....++.+|+.||+|||. +|||||||||+|||||++|++||+|||.|+.+.
T Consensus 154 e~A~nGdll~~i~K~G-----sfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKKYG-----SFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EecCCCcHHHHHHHhC-----cchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 9999999999997654 48888888999999999999999 999999999999999999999999999999885
Q ss_pred CCCCc----------ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHH
Q 003059 654 PKDHR----------HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEE 723 (852)
Q Consensus 654 ~~~~~----------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 723 (852)
+.... .......+||..|.+||++.....++.+|+|+|||+||+|+.|++||....+- +. ...
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----li---Fqk 298 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----LI---FQK 298 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----HH---HHH
Confidence 42111 11124588999999999999999999999999999999999999999865431 11 111
Q ss_pred HhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 724 FEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+. . ++- .++..-.+.+.+|+...|..||.+|++.++|.+.
T Consensus 299 I~-----~-l~y-----~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 299 IQ-----A-LDY-----EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HH-----H-hcc-----cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11 0 011 1122222456677778899999999999998863
No 21
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=338.65 Aligned_cols=269 Identities=25% Similarity=0.348 Sum_probs=216.7
Q ss_pred HHHHHHhcccccccccccccceEEEEEECCCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 493 YKELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 493 ~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
+.|+.+....|.++||+|-||.|.+....+...||||+++.. .....+|.+|+++|.+++||||++|+|+|..++.++
T Consensus 532 l~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 532 LVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred hhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 457777778889999999999999999998899999999843 344578999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+|+|||++|+|..||.++... .+.-..-.+|+.||+.||+||.+ .++|||||.++|+|+|.++++||+|||+++
T Consensus 612 mI~EYmEnGDLnqFl~aheap---t~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELP---TAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCc---ccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCccccc
Confidence 999999999999999876432 24555667899999999999998 899999999999999999999999999999
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh--CCccccccccccchhhHHHHHHHHhhCC
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS--GRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
-+...+.. +.....+-+++|||+|.+..++++.++|||+||+++||+++ ...||....++. .++.....+....
T Consensus 686 ~lysg~yy-~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~ 761 (807)
T KOG1094|consen 686 NLYSGDYY-RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQG 761 (807)
T ss_pred ccccCCce-eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCC
Confidence 77655433 33445667899999999999999999999999999999864 788886543321 1111111111111
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
....+ ..+.-....+.+++++||..+-++||+++++...|.+.
T Consensus 762 ~~~~l-------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVL-------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceec-------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11111 12223344667999999999999999999999988754
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=333.68 Aligned_cols=264 Identities=24% Similarity=0.319 Sum_probs=207.0
Q ss_pred hcccccccccccccceEEEEE-ECCCcEEEEEEecCcccchHH--HHHHHHHhhccc-ccceeeeeeeeccCc-eeeEEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQGEKQ--FRMEVATISSTH-HLNLVRLVGFSSEGK-HRLLVY 573 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~--f~~E~~~l~~l~-h~niv~l~g~~~~~~-~~~lV~ 573 (852)
.+|...++||.|.||.||+|+ ...+..||||+++..-...++ -.+|++.|++|. |||||+|.+.+.+.+ ..++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 467788999999999999998 566888999999844333333 368999999998 999999999999988 999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
|||+ .+|.+++..+ ++.+++..+..|+.||++||+|+|. +|+.|||+||+|||+.....+||+|||+||...
T Consensus 90 E~Md-~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 90 EFMD-CNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred Hhhh-hhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccc
Confidence 9994 5899988654 5689999999999999999999998 999999999999999999999999999999885
Q ss_pred CCCCcceeeeeecCCCCCCChhhhh-cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHH-----HHhh-
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLA-NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYE-----EFEK- 726 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~-----~~~~- 726 (852)
.. ...+..+.|.-|.|||++. ..-|+.+.|||++|||++||.+-++.|.+..+.++-.-+..+.. .+.+
T Consensus 162 Sk----pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 162 SK----PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG 237 (538)
T ss_pred cC----CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH
Confidence 43 3346677899999999875 66899999999999999999999999987765443322111110 0001
Q ss_pred CCcccccccccCCC-CCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 727 GNVKGIVDKSLAGE-DVDI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 727 ~~~~~~~d~~l~~~-~~~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+...+.-.+... ..+. ....++++++.+|+..||.+|||+.|.++.
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00111111111110 1111 244578899999999999999999999874
No 23
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-38 Score=333.43 Aligned_cols=263 Identities=22% Similarity=0.285 Sum_probs=201.1
Q ss_pred cccccccccccccceEEEEE-ECCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV~ 573 (852)
.|.-.++||+|.||.||||+ ..+++.||+|++.... .......+||.+|++|.||||++|.+...+. +..|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 34446789999999999999 5679999999997322 2234557999999999999999999988776 6899999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
|||++ +|.-++... +-.++..++..+++|++.||+|+|. ++|+|||||.+|||||.+|.+||+|||||+++.
T Consensus 198 eYMdh-DL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred ecccc-hhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeecc
Confidence 99976 787777432 3458999999999999999999999 999999999999999999999999999999886
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc--
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK-- 730 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-- 730 (852)
.... ...+..+-|.-|.|||.+.+. .|+...|+||.||||.||+.|++.|.+..+.++...+....-...+....
T Consensus 270 ~~~~--~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 270 PSGS--APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred CCCC--cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 6332 335677789999999999876 79999999999999999999999998876544433222211111111111
Q ss_pred -----cccccccCCCCCCHHH-----HHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 731 -----GIVDKSLAGEDVDIEQ-----VMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 731 -----~~~d~~l~~~~~~~~~-----~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+.+.-.- .....+ ....++|+..+|..||.+|.|+.++++
T Consensus 348 kLP~~~~~kp~~~y-~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 348 KLPHATIFKPQQPY-KRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCcccccCCCCcc-cchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 111111000 001111 123567777889999999999999885
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=337.51 Aligned_cols=238 Identities=29% Similarity=0.478 Sum_probs=195.5
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHHHH
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLDNF 584 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 584 (852)
+=||.|+.|.||+|.+++. .||||+++.. -+.+|+-|++|+|+||+.|.|+|.....++||||||+.|-|...
T Consensus 130 eWlGSGaQGAVF~Grl~ne-tVAVKKV~el------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHNE-TVAVKKVREL------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhhccCcccceeeeeccCc-eehhHHHhhh------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 3499999999999999764 5999988732 24578889999999999999999999999999999999999999
Q ss_pred hhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeee
Q 003059 585 LFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTS 664 (852)
Q Consensus 585 l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 664 (852)
|.. +..+.-.....|..+||.||.|||. +.|||||||.-||||..+..+||+|||-++..... .+.-.
T Consensus 203 Lka-----~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~----STkMS 270 (904)
T KOG4721|consen 203 LKA-----GRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK----STKMS 270 (904)
T ss_pred Hhc-----cCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh----hhhhh
Confidence 964 4457778888999999999999999 88999999999999999999999999999876432 34445
Q ss_pred ecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCH
Q 003059 665 VRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDI 744 (852)
Q Consensus 665 ~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 744 (852)
+.||..|||||++++.+.++|+|||||||||||||||..||..-+... +.| + +-...|. -+.+.
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIw-------G----VGsNsL~-LpvPs 334 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIW-------G----VGSNSLH-LPVPS 334 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEE-------e----ccCCccc-ccCcc
Confidence 789999999999999999999999999999999999999997432110 001 0 0011111 13444
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 745 EQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 745 ~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
+....+.-++.+||+..|.+||++.+|+..|+-
T Consensus 335 tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 335 TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 445556667778999999999999999988753
No 25
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-37 Score=337.75 Aligned_cols=266 Identities=26% Similarity=0.351 Sum_probs=202.3
Q ss_pred HhcccccccccccccceEEEEEECC-----------------CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLAN-----------------RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVR 558 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~ 558 (852)
+..+.+.++||+|+||.||++.+++ +..||+|.+... .....+|.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4567788999999999999998532 336999998743 334567999999999999999999
Q ss_pred eeeeeccCceeeEEEeecCCCCHHHHhhhccc--------------CCccccchhHHHHHHHhhHhhhhhhccccCCCcc
Q 003059 559 LVGFSSEGKHRLLVYEFMKNGSLDNFLFANEE--------------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIV 624 (852)
Q Consensus 559 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iv 624 (852)
+++++.+.+..++||||+++++|.+++..... .....+++..+++++.||+.||+|||+ .+|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCcc
Confidence 99999999999999999999999999864321 112357889999999999999999998 8999
Q ss_pred cCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh--CC
Q 003059 625 HCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS--GR 702 (852)
Q Consensus 625 H~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--G~ 702 (852)
||||||+|||+++++.+||+|||+++.+..... ........++..|+|||.+....++.++||||||+++|||++ +.
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce-eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 999999999999999999999999986643221 112223445788999999998899999999999999999987 55
Q ss_pred ccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 703 RNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 703 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
.||...... .........+.... ..... ..+......+.+++.+||+.+|++||++.+|.+.|++
T Consensus 240 ~p~~~~~~~---~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDE---QVIENAGEFFRDQG-RQVYL------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHH---HHHHHHHHHhhhcc-ccccc------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 677543221 11111111111110 00000 0011122457788999999999999999999998863
No 26
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.7e-38 Score=313.47 Aligned_cols=259 Identities=21% Similarity=0.302 Sum_probs=201.1
Q ss_pred ccccccccccceEEEEEEC-CCcEEEEEEecCcccc---hHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 503 FKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQG---EKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
-.-++|+|+||+|||.+.+ .|+.||||++...++. .+--.+|+++|++++|+|+|.++.+|...+..+||+||++.
T Consensus 6 ~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh 85 (396)
T KOG0593|consen 6 KLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH 85 (396)
T ss_pred hhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence 3457999999999999965 4899999999744332 34457999999999999999999999999999999999987
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
.-|.+ |... ...++.+.+.+++.|++.|+.|+|+ +++|||||||+||||..++.+||+|||+|+.+....
T Consensus 86 TvL~e-Le~~----p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg-- 155 (396)
T KOG0593|consen 86 TVLHE-LERY----PNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG-- 155 (396)
T ss_pred HHHHH-HHhc----cCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCc--
Confidence 55544 4332 2347888999999999999999999 899999999999999999999999999999887322
Q ss_pred ceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHH--------hhC-C
Q 003059 659 HRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEF--------EKG-N 728 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~--------~~~-~ 728 (852)
...+..+-|.-|.|||.+.+ .+|+...|||++||++.||++|.+.|.+..+.+..+++......+ ... .
T Consensus 156 -d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 156 -DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred -chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 22345667899999999987 689999999999999999999999998887766655544332211 111 1
Q ss_pred cccccccccCCCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 729 VKGIVDKSLAGEDVDI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+.-+.... .-+. ....-+++++..|++.||.+|++-++++.
T Consensus 235 F~Gv~lP~~~~-~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEH-PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCC-ccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111111 1111 11224778999999999999999998874
No 27
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-38 Score=337.93 Aligned_cols=246 Identities=23% Similarity=0.351 Sum_probs=202.0
Q ss_pred ccccccccccccceEEEEE-ECCCcEEEEEEecCcccch-HHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 501 KGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQGE-KQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~-~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
|.-.++||+|+.|.||.+. ...++.||||++....+.. +-+.+|+.+|+..+|+|||++++.+..+++.|+|||||++
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g 354 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG 354 (550)
T ss_pred hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence 3345689999999999998 4568889999999655544 4568999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+.+.. ..+++.++..|++++++||+|||. ++|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 355 gsLTDvVt~------~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 355 GSLTDVVTK------TRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred Cchhhhhhc------ccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence 999998843 348999999999999999999999 8999999999999999999999999999987764322
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.....+||+.|||||++....|++|.||||||++++||+.|.+||-........+ .+.... .+.+
T Consensus 425 --KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly-------LIa~ng-----~P~l- 489 (550)
T KOG0578|consen 425 --KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNG-----TPKL- 489 (550)
T ss_pred --ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH-------HHhhcC-----CCCc-
Confidence 4456789999999999999999999999999999999999999996432211111 111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.........+.++..+||+.|+++||++.|+++
T Consensus 490 --k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 490 --KNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred --CCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 112222345667888899999999999999986
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=332.77 Aligned_cols=258 Identities=19% Similarity=0.315 Sum_probs=201.6
Q ss_pred cccCHHHHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccc----hHHHHHHHHHhhcccccceeeeeeeec
Q 003059 489 VQFSYKELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG----EKQFRMEVATISSTHHLNLVRLVGFSS 564 (852)
Q Consensus 489 ~~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~----~~~f~~E~~~l~~l~h~niv~l~g~~~ 564 (852)
..++..+|...+ ...||+|+++.||+|.+ +++.||||++...... .+.|.+|+.+|.+++||||++++|++.
T Consensus 13 ~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~ 88 (283)
T PHA02988 13 KCIESDDIDKYT---SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFII 88 (283)
T ss_pred eecCHHHcCCCC---CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEE
Confidence 344555553322 14699999999999998 5778999999754333 366789999999999999999999987
Q ss_pred c----CceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc
Q 003059 565 E----GKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN 640 (852)
Q Consensus 565 ~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 640 (852)
+ ....++||||+++|+|.+++... ..+++...++++.|++.||.|||+. .+++||||||+|||+++++.
T Consensus 89 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 89 DIVDDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYK 161 (283)
T ss_pred ecccCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCc
Confidence 6 45789999999999999999643 3588999999999999999999972 37889999999999999999
Q ss_pred eEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhc--CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHH
Q 003059 641 AKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN--LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSL 718 (852)
Q Consensus 641 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~ 718 (852)
+||+|||+++.+.... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... +
T Consensus 162 ~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~-- 230 (283)
T PHA02988 162 LKIICHGLEKILSSPP------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---I-- 230 (283)
T ss_pred EEEcccchHhhhcccc------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---H--
Confidence 9999999998654321 23457889999999976 689999999999999999999999997543211 0
Q ss_pred HHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 719 WAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 719 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
.......... . ..+......+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 231 --~~~i~~~~~~----~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 231 --YDLIINKNNS----L-----KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred --HHHHHhcCCC----C-----CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1111111100 0 111122345678888999999999999999999998764
No 29
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.8e-37 Score=346.69 Aligned_cols=263 Identities=28% Similarity=0.418 Sum_probs=203.6
Q ss_pred HHHhcccccccccccccceEEEEEE------CCCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeeeccC
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVL------ANRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFSSEG 566 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~ 566 (852)
+....+.+.++||+|+||.||+|+. ..+..||||+++.. ....+.+.+|+.++..+ +||||++++++|.++
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 3445677889999999999999973 23568999999733 23345788999999999 899999999999999
Q ss_pred ceeeEEEeecCCCCHHHHhhhccc--------------------------------------------------------
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEE-------------------------------------------------------- 590 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 590 (852)
+..++||||+++|+|.+++.....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999999964321
Q ss_pred --------------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 591 --------------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 591 --------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
.....+++..+++++.||++||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 011257899999999999999999998 899999999999999999999999999998664322
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
.. .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... .+ ...+..+.. .
T Consensus 269 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~----~~~~~~~~~-----~ 336 (375)
T cd05104 269 NY-VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KF----YKMIKEGYR-----M 336 (375)
T ss_pred cc-cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HH----HHHHHhCcc-----C
Confidence 11 11122345678999999999999999999999999999998 888986432211 11 111111110 0
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.. +......+.+++.+|++.||++||++.+|++.|++.
T Consensus 337 ~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 LS-----PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CC-----CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 00 001123567889999999999999999999999863
No 30
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=338.66 Aligned_cols=262 Identities=28% Similarity=0.394 Sum_probs=218.0
Q ss_pred CHHHHHHhcccccccccccccceEEEEEECC-CcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 492 SYKELQRSTKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 492 ~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
.-.|+++......++||.|.||.||.|+|+. .-.||||.++.+....++|..|+.+|+.++|||+|+|+|+|+.+...|
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 4457778888889999999999999999865 567999999988888999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
||.|||.+|+|.+||.... +..++--..+.++.||+.||+||.. +++|||||.++|+|+.++..+||+||||++
T Consensus 340 IiTEfM~yGNLLdYLRecn---r~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECN---RSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred EEEecccCccHHHHHHHhc---hhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhh
Confidence 9999999999999997654 3346666778999999999999998 899999999999999999999999999999
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNV 729 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (852)
++..+.+. ......-.+.|.|||.+....++.|+|||+|||+||||.| |-.||.+.+.. .++..++.+-.
T Consensus 414 lMtgDTYT--AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-------qVY~LLEkgyR 484 (1157)
T KOG4278|consen 414 LMTGDTYT--AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------QVYGLLEKGYR 484 (1157)
T ss_pred hhcCCcee--cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-------HHHHHHhcccc
Confidence 98764322 2223345788999999999999999999999999999998 88888654321 13333333321
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.+ -+.-....+.++++.||+.+|.+||+++|+-+.+|.+
T Consensus 485 M~----------~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 485 MD----------GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred cc----------CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 11 1222334567778889999999999999999988865
No 31
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.5e-37 Score=382.90 Aligned_cols=270 Identities=24% Similarity=0.486 Sum_probs=217.6
Q ss_pred ccCHHHHHHhcccccccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCce
Q 003059 490 QFSYKELQRSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKH 568 (852)
Q Consensus 490 ~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~ 568 (852)
.++++++... +...+.||+|+||.||+|.. .++..||||+++.... ....|++++++++|||||+++|+|.+.+.
T Consensus 682 ~~~~~~~~~~-~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~ 757 (968)
T PLN00113 682 SITINDILSS-LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGLCRSEKG 757 (968)
T ss_pred hhhHHHHHhh-CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEEEEcCCC
Confidence 3556666543 44556899999999999996 5788999999874332 22456889999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++||||+++|+|.+++. .++|..+.+|+.||++||+|||..+.++|+||||||+||+++.++.+++. ||.
T Consensus 758 ~~lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~ 828 (968)
T PLN00113 758 AYLIHEYIEGKNLSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL 828 (968)
T ss_pred CEEEEeCCCCCcHHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence 999999999999999994 28899999999999999999997655899999999999999999988876 665
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
....... ....++..|+|||++.+..++.|+|||||||++|||+||+.||+.... .......|+........
T Consensus 829 ~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~ 900 (968)
T PLN00113 829 PGLLCTD-------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCH 900 (968)
T ss_pred ccccccC-------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccc
Confidence 5433211 123578999999999999999999999999999999999999964332 23345566655554555
Q ss_pred cccccccccCCC-CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 729 VKGIVDKSLAGE-DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 729 ~~~~~d~~l~~~-~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
....+++.+... ..+.++..++.+++.+|++.+|++||+|+||++.|+++..
T Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 901 LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred hhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 556666665432 3456777888999999999999999999999999988754
No 32
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.9e-37 Score=328.74 Aligned_cols=257 Identities=26% Similarity=0.381 Sum_probs=202.8
Q ss_pred HHHhcccccccccccccceEEEEEEC----CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCcee
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA----NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~ 569 (852)
|....+.+.+.||+|+||.||+|.+. .+..||+|+++... .....|.+|+.++.+++||||+++++++..++..
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 34456788899999999999999853 35689999988432 3346789999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+|++|||.+
T Consensus 82 ~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred EEEEEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCccc
Confidence 9999999999999999643 2358899999999999999999998 89999999999999999999999999987
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCC
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
....... ........++..|+|||.+.+..++.++||||||+++||+++ |+.||....... ......++.
T Consensus 155 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-------~~~~~~~~~ 225 (266)
T cd05064 155 QEDKSEA--IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-------VIKAVEDGF 225 (266)
T ss_pred ccccccc--hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCC
Confidence 6532211 111112335678999999999999999999999999999875 999996543211 111111111
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.. +.+......+.+++..||+.+|.+||++.+|.+.|+++
T Consensus 226 ~~----------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 RL----------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC----------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00 11112234567888899999999999999999998764
No 33
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.8e-37 Score=325.97 Aligned_cols=259 Identities=29% Similarity=0.445 Sum_probs=209.4
Q ss_pred HHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
|+....+.+.++||+|+||.||+|...+++.||+|.++......+++.+|+.++++++|+||+++++++...+..++|||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 34556788889999999999999998788889999998665667789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 82 LMKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred cccCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 999999999996432 3468999999999999999999998 8999999999999999999999999999987642
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
... ........+..|+|||.+.+..++.++||||||+++|||++ |+.||....... ..........
T Consensus 156 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~---- 222 (261)
T cd05068 156 DIY--EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-------VLQQVDQGYR---- 222 (261)
T ss_pred Ccc--cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC----
Confidence 211 11111223457999999999999999999999999999999 999996432111 1111111100
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
+ +.+......+.+++.+|++.+|.+||++.++++.|+++
T Consensus 223 ---~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 ---M---PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---C---CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0 11112235678889999999999999999999999863
No 34
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.4e-37 Score=325.53 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=207.6
Q ss_pred HHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
....+.+.++||+|+||.||+|...++..||+|.+.......+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 34567788999999999999999888888999998865556678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..++.++.|+++||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 84 AKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred CCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 9999999996532 3458889999999999999999998 899999999999999999999999999998764321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
........++..|+|||.+....++.++||||||+++|||++ |+.||....... ......... ..+
T Consensus 158 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~----~~~ 224 (261)
T cd05072 158 --YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-------VMSALQRGY----RMP 224 (261)
T ss_pred --eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCC----CCC
Confidence 111122345678999999998899999999999999999998 999996432211 111111110 001
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
. .......+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 225 ~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 225 R------MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred C------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 1 111224567889999999999999999999999863
No 35
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.6e-37 Score=343.88 Aligned_cols=264 Identities=28% Similarity=0.407 Sum_probs=203.3
Q ss_pred HHHhcccccccccccccceEEEEEEC------CCcEEEEEEecCcc--cchHHHHHHHHHhhcc-cccceeeeeeeeccC
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIE--QGEKQFRMEVATISST-HHLNLVRLVGFSSEG 566 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~ 566 (852)
+....+.+.+.||+|+||.||+++.. +...||||++.... .....+.+|+++++.+ +|+||++++++|.+.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 34456778899999999999998742 23579999997432 2345688999999999 899999999999999
Q ss_pred ceeeEEEeecCCCCHHHHhhhccc--------------------------------------------------------
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEE-------------------------------------------------------- 590 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 590 (852)
+..++||||+++|+|.+++.....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999999999864321
Q ss_pred ---------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 591 ---------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 591 ---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.....+++..+++++.||++||+|||+ ++|+||||||+|||+++++.+||+|||+++....... ...
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-~~~ 270 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-YVV 270 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-eee
Confidence 012357889999999999999999998 8999999999999999999999999999986543211 111
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGE 740 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (852)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||....... . .......+ . .....
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~----~~~~~~~~-~----~~~~~-- 337 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--K----FYKMVKRG-Y----QMSRP-- 337 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--H----HHHHHHcc-c----CccCC--
Confidence 122345678999999999999999999999999999997 999997543211 0 00111111 0 00000
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 741 DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 741 ~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
......+.+++.+|++.||++||++.+|+++|+++.
T Consensus 338 ---~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 ---DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 011245678888999999999999999999998753
No 36
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2e-37 Score=330.29 Aligned_cols=244 Identities=28% Similarity=0.419 Sum_probs=202.9
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcccch---HHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGE---KQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.|.+.+.||+|.||.||||+.+ +.+.||+|.+.+....+ +.+.+|++++++++|||||.++++|+...+.++|.||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 3556788999999999999854 57889999997544443 4578999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+.+ +|..+|..+. .++++.+..|+.++..||.|||+ .+|+|||+||+||||+.++.+|++|||+|+.+..
T Consensus 83 a~g-~L~~il~~d~-----~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 83 AVG-DLFTILEQDG-----KLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhh-hHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 977 9999997654 48999999999999999999999 8999999999999999999999999999998764
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
.....+.+.||+-|||||...+.+|+..+|+||+||++||+.+|++||....- ...+ + .++..
T Consensus 153 --~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si------~~Lv-~--------~I~~d 215 (808)
T KOG0597|consen 153 --NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI------TQLV-K--------SILKD 215 (808)
T ss_pred --CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH------HHHH-H--------HHhcC
Confidence 34566788999999999999999999999999999999999999999963211 0000 0 11111
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. ..+.+....++.++.-.+++||..|-+-.+++.
T Consensus 216 ~v---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 216 PV---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CC---CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 00 223344456677777899999999999988774
No 37
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8.9e-37 Score=322.95 Aligned_cols=251 Identities=26% Similarity=0.431 Sum_probs=203.0
Q ss_pred cccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
.+.+.++||+|+||.||++.+.++..+|+|.+.......++|.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENG 84 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCC
Confidence 46677899999999999999888888999998866666778999999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05114 85 CLLNYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-- 155 (256)
T ss_pred cHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCce--
Confidence 9999986432 248899999999999999999998 8999999999999999999999999999886532211
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... . ......+.. ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~----~~~i~~~~~--~~~---- 222 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---V----VEMISRGFR--LYR---- 222 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHHHCCCC--CCC----
Confidence 11122335668999999998899999999999999999999 899996443211 0 111111110 000
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
+......+.+++.+|++.+|.+||++.++++.|.
T Consensus 223 ----~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 ----PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1112245788999999999999999999999873
No 38
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.2e-36 Score=327.37 Aligned_cols=249 Identities=26% Similarity=0.315 Sum_probs=197.1
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
|...+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++.+++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 45668899999999999985 568899999986322 2334678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++......
T Consensus 82 ~~~g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 82 MNGGDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred cCCCcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 99999998885432 2358899999999999999999998 89999999999999999999999999999865321
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
.......|+..|+|||.+.+..++.++|||||||++|||++|+.||.......... ........ .
T Consensus 156 ----~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~---~~~~~~~~--------~ 220 (285)
T cd05631 156 ----ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE---EVDRRVKE--------D 220 (285)
T ss_pred ----CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH---HHHHHhhc--------c
Confidence 12234568999999999999999999999999999999999999997543211100 00000100 0
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
.. ..+......+.+++.+||+.||.+||+ ++++++
T Consensus 221 ~~---~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 QE---EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cc---cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00 111112235677888999999999997 777775
No 39
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.4e-37 Score=327.78 Aligned_cols=258 Identities=29% Similarity=0.464 Sum_probs=204.6
Q ss_pred cccccccccccccceEEEEEECC------CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN------RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLL 571 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 571 (852)
.+.+.+.||+|+||.||+|.... ...|++|.+... .....+|.+|++++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 56678899999999999998643 257999998733 2334678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhhhcccCC-----------ccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc
Q 003059 572 VYEFMKNGSLDNFLFANEEGS-----------GKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN 640 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 640 (852)
+|||+++++|.+++....... ...+++..++.++.|++.||+|||+ .+++||||||+||++++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCc
Confidence 999999999999997543211 1468899999999999999999999 89999999999999999999
Q ss_pred eEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHH
Q 003059 641 AKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLW 719 (852)
Q Consensus 641 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 719 (852)
+||+|||+++.....+. ........++..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 163 ~~L~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~------- 234 (283)
T cd05048 163 VKISDFGLSRDIYSADY-YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE------- 234 (283)
T ss_pred EEECCCcceeecccccc-ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 99999999986543221 112233456788999999998899999999999999999998 999997543211
Q ss_pred HHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 720 AYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
....+..+... ..+......+.+++.+||+.+|.+||++.+|++.|+.+
T Consensus 235 ~~~~i~~~~~~----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 VIEMIRSRQLL----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHHcCCcC----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11111111111 11122335677888999999999999999999999753
No 40
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.4e-37 Score=299.28 Aligned_cols=264 Identities=21% Similarity=0.306 Sum_probs=203.2
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCcccc---hHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQG---EKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+|.-.++||+|.||.||+|.. ..++.||||+++..... .....+|++.|+.++|+||+.++++|.+.+..-||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 455567899999999999994 56899999999833222 35678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
|+. +|+..+... ...++-..+..++.++++||+|||. +.|+||||||.|+|++++|.+||+|||+++.+...
T Consensus 83 m~t-dLe~vIkd~----~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 83 MPT-DLEVVIKDK----NIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred ccc-cHHHHhccc----ccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 954 898888543 4578899999999999999999999 89999999999999999999999999999988754
Q ss_pred CCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC---ccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN---VKG 731 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~ 731 (852)
.. .....+-|.-|.|||.+.+. .|+...||||.||++.||+-|.+-|.+..+.++...+..+.....+.. +..
T Consensus 155 ~~---~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 155 NR---IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred Cc---ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccc
Confidence 32 22333678899999998765 689999999999999999999988877665544333222211111111 111
Q ss_pred ccccc----cCC---CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 732 IVDKS----LAG---EDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 732 ~~d~~----l~~---~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+.|-. ... ...-......+++++..++..||.+|.++.|++++
T Consensus 232 lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11100 000 00111223455888999999999999999998864
No 41
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.5e-36 Score=322.66 Aligned_cols=256 Identities=29% Similarity=0.428 Sum_probs=205.3
Q ss_pred HhcccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
...+.+.++||+|+||.||+|... .++.|++|.+........++.+|++++.+++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 345667889999999999999965 4788999998866656678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..++.++.|++++|+|||+ .+++||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~~~L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 85 TYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred CCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 9999999996432 3458999999999999999999998 899999999999999999999999999998764321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. ........+..|+|||.+.+..++.++||||||+++|||++ |..||....... ......... ..
T Consensus 159 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~-----~~ 224 (263)
T cd05052 159 Y--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKGY-----RM 224 (263)
T ss_pred e--eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCCC-----CC
Confidence 1 11112234568999999999999999999999999999998 999986432211 111111110 00
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
..+......+.+++.+|++.+|.+||++.+++++|+.+
T Consensus 225 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 -----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01111224577788999999999999999999999864
No 42
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=334.09 Aligned_cols=248 Identities=27% Similarity=0.392 Sum_probs=202.0
Q ss_pred HHHhcccccccccccccceEEEEEE-CCCcEEEEEEecCc-----c-cchHHHHHHHHHhhccc-ccceeeeeeeeccCc
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI-----E-QGEKQFRMEVATISSTH-HLNLVRLVGFSSEGK 567 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~-~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~ 567 (852)
.....|.+.+.||+|.||.|++|.. ..++.||+|.+... . ...+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3455778889999999999999974 56799999976532 1 23456778999999999 999999999999999
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC-CceEEeec
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN-YNAKVSDF 646 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DF 646 (852)
..++||||+.+|+|.+++... ..+.+.....++.|++.|++|||+ ++|+||||||+|||+|.+ +++||+||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DF 165 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDF 165 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecc
Confidence 999999999999999999653 347789999999999999999999 899999999999999999 99999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcCC-CC-CCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHH
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLP-IT-SKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEF 724 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 724 (852)
|++..... .........|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||+...... ....+
T Consensus 166 G~s~~~~~---~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-------l~~ki 235 (370)
T KOG0583|consen 166 GLSAISPG---EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-------LYRKI 235 (370)
T ss_pred ccccccCC---CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-------HHHHH
Confidence 99998741 123445678999999999999877 76 78999999999999999999998632110 11111
Q ss_pred hhCCcccccccccCCCCCCHHH-HHHHHHHHHhccccCCCCCCCHHHHH
Q 003059 725 EKGNVKGIVDKSLAGEDVDIEQ-VMRAIQVSFWCIQEQPSQRPMMGKVV 772 (852)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~~~~~-~~~~~~l~~~cl~~dp~~RPt~~ev~ 772 (852)
..+. . ..+..- ...+..++.+|+..+|.+|+++.+|+
T Consensus 236 ~~~~--------~---~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 236 RKGE--------F---KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred hcCC--------c---cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1111 0 011111 45677888999999999999999999
No 43
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.9e-36 Score=339.43 Aligned_cols=265 Identities=26% Similarity=0.385 Sum_probs=205.2
Q ss_pred HHHHhcccccccccccccceEEEEEECC------CcEEEEEEecCc--ccchHHHHHHHHHhhccc-ccceeeeeeeecc
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLAN------RTVVAVKQLEGI--EQGEKQFRMEVATISSTH-HLNLVRLVGFSSE 565 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~ 565 (852)
+.....+.+.++||+|+||.||+|+... ...||||++... ....+.|.+|+++++++. ||||++++++|.+
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 3345567778999999999999998532 346999999733 223467899999999996 9999999999999
Q ss_pred CceeeEEEeecCCCCHHHHhhhcccC------------------------------------------------------
Q 003059 566 GKHRLLVYEFMKNGSLDNFLFANEEG------------------------------------------------------ 591 (852)
Q Consensus 566 ~~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------ 591 (852)
....+|||||+++|+|.++|......
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 99999999999999999998753210
Q ss_pred -------------------------------------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceE
Q 003059 592 -------------------------------------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENIL 634 (852)
Q Consensus 592 -------------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIL 634 (852)
....+++..++.++.||++||+|||+ .+|+||||||+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEE
Confidence 11347888899999999999999998 89999999999999
Q ss_pred eCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccc
Q 003059 635 LDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNR 713 (852)
Q Consensus 635 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~ 713 (852)
+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccc-cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 999999999999999865432111 11223346788999999999999999999999999999997 9999864321110
Q ss_pred hhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 714 KKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 714 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
.......+. .. ..+......+.+++.+||+.+|++||++.+|+++|+.+.
T Consensus 349 ------~~~~~~~~~-------~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 349 ------FYNKIKSGY-------RM---AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ------HHHHHhcCC-------CC---CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111111110 00 111122346778899999999999999999999998764
No 44
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-37 Score=316.47 Aligned_cols=247 Identities=24% Similarity=0.400 Sum_probs=206.7
Q ss_pred HhcccccccccccccceEEEEEE-CCCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
+-+|.|.+.||+|.||.|-++.. ..|+.||||.+++.. +..-.+.+|++||..|+||||+.++.+|...+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 44677889999999999999985 679999999997432 3334578999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||..+|.|.+|+... ..|++.+..++++||..|+.|+|. ++++|||||.+|||||.++++||+|||++.++
T Consensus 132 MEYaS~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 132 MEYASGGELYDYISER-----GSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLY 203 (668)
T ss_pred EEecCCccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhh
Confidence 9999999999999654 359999999999999999999998 89999999999999999999999999999987
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCC-CCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPIT-SKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
... .....+.|.+-|.+||++.+.+|. +..|-|||||+||-|+.|..||++.+.. . ....+..+
T Consensus 204 ~~~----kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~----lvrQIs~G---- 268 (668)
T KOG0611|consen 204 ADK----KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---R----LVRQISRG---- 268 (668)
T ss_pred ccc----cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---H----HHHHhhcc----
Confidence 542 344668899999999999999884 7899999999999999999999865321 1 11122222
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
.-..++..-...-++.|++..+|++|.|+.+|...-
T Consensus 269 --------aYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 269 --------AYREPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred --------cccCCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 122233334566788999999999999999998743
No 45
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.6e-37 Score=325.79 Aligned_cols=249 Identities=35% Similarity=0.547 Sum_probs=192.5
Q ss_pred ccccccccccceEEEEEEC-----CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 503 FKDKLGAGGFGAVYRGVLA-----NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.+.||.|.||.||+|.+. .+..|+||.++.. ....++|.+|++.+++++||||++++|++.+.+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4678999999999999976 2578999999643 23468899999999999999999999999988889999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++|+|.++|.... ...+++..++.|+.||++||.|||+ .+++|+||+++|||+++++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp -TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 99999999997652 3458999999999999999999998 78999999999999999999999999999876322
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. ............|+|||.+....++.++||||||+++|||++ |+.||....... ....+.++....
T Consensus 157 ~~-~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-------~~~~~~~~~~~~--- 225 (259)
T PF07714_consen 157 SK-YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-------IIEKLKQGQRLP--- 225 (259)
T ss_dssp SS-EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-------HHHHHHTTEETT---
T ss_pred cc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccce---
Confidence 11 122223446778999999999999999999999999999999 788886442211 111222221111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
.+......+.+++..||+.+|++||++.+|++.|
T Consensus 226 -------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 -------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111233466788899999999999999999876
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.5e-36 Score=329.71 Aligned_cols=240 Identities=24% Similarity=0.267 Sum_probs=193.2
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.||+|+||.||++.. .+++.||+|++... ......+..|++++++++||||+++++++..++..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999986 46889999998732 223356788999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... .
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---~ 149 (323)
T cd05571 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---G 149 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC---C
Confidence 999998643 358899999999999999999998 89999999999999999999999999998753221 1
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAG 739 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (852)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-------~~~~~~~~~~---------- 212 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-------LFELILMEEI---------- 212 (323)
T ss_pred CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-------HHHHHHcCCC----------
Confidence 12234569999999999999999999999999999999999999996432211 0111111100
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 740 EDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 740 ~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
..+......+.+++.+|++.||++|| ++.++++
T Consensus 213 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 213 -RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 11111233567888899999999999 7888875
No 47
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.2e-36 Score=318.83 Aligned_cols=252 Identities=25% Similarity=0.404 Sum_probs=203.3
Q ss_pred hcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
..+.+.+.||+|+||.||+|...++..+|+|.+.......++|.+|+.++.+++||||+++++++.+....++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 35677889999999999999987777899999886555567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++.... ..+++..++.++.||+.||+|||+ ++++|+||||+||++++++.+||+|||+++.......
T Consensus 84 ~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05113 84 GCLLNYLREHG----KRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY- 155 (256)
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCce-
Confidence 99999996432 258999999999999999999998 8999999999999999999999999999886543211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .......+...
T Consensus 156 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~------- 220 (256)
T cd05113 156 -TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-------TVEKVSQGLRL------- 220 (256)
T ss_pred -eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHhcCCCC-------
Confidence 11122335678999999998889999999999999999998 999986433211 01111111100
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
..+......+.+++.+||+.+|.+||++.+|++.|+
T Consensus 221 ---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 ---YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 001112356778899999999999999999998774
No 48
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.3e-37 Score=332.37 Aligned_cols=245 Identities=25% Similarity=0.384 Sum_probs=203.1
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
-|.+.+.||.|+-|.|-+|+. ..|+.+|||++.+. ......+++|+.+|+.+.||||+++++++.++.+.|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 456778999999999999984 57999999999743 2234568999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|-|.++|..+. .+.+.+..+++.||+.|+.|+|. .+|+||||||+|+|||.++++||+|||+|.+-.+
T Consensus 93 yv~gGELFdylv~kG-----~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG-----PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred ecCCchhHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 999999999997543 58899999999999999999999 8999999999999999999999999999987533
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCC-CCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPIT-SKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.....+.+|.+.|.|||++++.+|. .++||||.|||||.||||+.||+..+ ... ...++..|..
T Consensus 165 ----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN---ir~----LLlKV~~G~f---- 229 (786)
T KOG0588|consen 165 ----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN---IRV----LLLKVQRGVF---- 229 (786)
T ss_pred ----CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc---HHH----HHHHHHcCcc----
Confidence 3455678899999999999999985 68999999999999999999998322 111 1122222211
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+-.-..++.+++.++++.||++|-|++||++.
T Consensus 230 -------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 -------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1122223356678888999999999999999873
No 49
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.6e-36 Score=318.27 Aligned_cols=257 Identities=30% Similarity=0.461 Sum_probs=207.8
Q ss_pred HHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
+|...++++.++||+|+||.||+|...+++.||+|.+........+|.+|+.++++++|+||+++++++. .+..++|||
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 4566788899999999999999999888899999999866666778999999999999999999999874 457899999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++.... +..+++..++.++.|++.||+|||+ .+++||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 81 YMENGSLVDFLKTPE---GIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred cCCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999986432 3468899999999999999999998 8999999999999999999999999999986643
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
... .......++..|+|||.+....++.++||||||+++|||++ |+.||....... . ...+......
T Consensus 155 ~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~----~~~~~~~~~~--- 222 (260)
T cd05067 155 NEY--TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---V----IQNLERGYRM--- 222 (260)
T ss_pred CCc--ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---H----HHHHHcCCCC---
Confidence 211 11122345678999999998899999999999999999999 999997443211 0 1111111000
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
+.+......+.+++.+|++.+|++||+++++++.|+.
T Consensus 223 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 -------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0011112357888999999999999999999999975
No 50
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-36 Score=338.77 Aligned_cols=263 Identities=23% Similarity=0.291 Sum_probs=210.5
Q ss_pred cccccccccccccceEEEEEECCC-cEEEEEEec-CcccchHHHHHHHHHhhccc-ccceeeeeee-ecc------Ccee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLANR-TVVAVKQLE-GIEQGEKQFRMEVATISSTH-HLNLVRLVGF-SSE------GKHR 569 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~l~-~~~~~~~~f~~E~~~l~~l~-h~niv~l~g~-~~~------~~~~ 569 (852)
+.++.+.|-+|||+.||.+....+ ..+|+|++- ..+...+.+.+||++|++|+ |+|||.+++. ... .-+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 455678899999999999998766 899999886 55666788999999999997 9999999993 221 2378
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
+|+||||++|+|-+++..+.. ..|++.++++|+.|+++|+++||.. +.+|||||||-+||||+.+++.||||||.+
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 999999999999999976553 2399999999999999999999974 467999999999999999999999999998
Q ss_pred cccCCCCCcceee------eeecCCCCCCChhhh---hcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH
Q 003059 650 KLINPKDHRHRTL------TSVRGTRGYLAPEWL---ANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA 720 (852)
Q Consensus 650 ~~~~~~~~~~~~~------~~~~gt~~y~aPE~~---~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 720 (852)
............. -...-|+-|+|||.+ .+..+++|+|||+|||+||-|+....||+....
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 6432211110000 112368999999977 578999999999999999999999999975421
Q ss_pred HHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCCCCCC
Q 003059 721 YEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIEKPPA 786 (852)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~~~~~ 786 (852)
..+++....- +.......++..||..||+.||.+||++.+|+..+-+++..+.+-.
T Consensus 264 ---------laIlng~Y~~-P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~ 319 (738)
T KOG1989|consen 264 ---------LAILNGNYSF-PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP 319 (738)
T ss_pred ---------eeEEeccccC-CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence 2233333222 3335677888899999999999999999999999988876554443
No 51
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.4e-36 Score=318.18 Aligned_cols=256 Identities=30% Similarity=0.437 Sum_probs=205.7
Q ss_pred HHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
....|.+.++||+|+||.||+|.+.+...||+|++.......++|.+|++++.+++|+||+++++++.+ ...++||||+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 345688899999999999999998777789999998655566789999999999999999999998754 5689999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..+..++.|+++||+|||+ .+++||||||+||++++++.+||+|||.++.+....
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 83 SKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred CCCcHHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 9999999996432 3457899999999999999999998 899999999999999999999999999998664322
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. .......++..|+|||...+..++.++||||||+++|||++ |+.||....... ......... ..
T Consensus 157 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-------~~~~~~~~~-----~~ 222 (262)
T cd05071 157 Y--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQVERGY-----RM 222 (262)
T ss_pred c--ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-------HHHHHhcCC-----CC
Confidence 1 11122346678999999998899999999999999999999 888886432110 111111110 00
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
....+....+.+++.+|++.+|++||++.++.+.|+..
T Consensus 223 -----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 -----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -----CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11223345678999999999999999999999999864
No 52
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.7e-36 Score=316.53 Aligned_cols=255 Identities=29% Similarity=0.452 Sum_probs=204.3
Q ss_pred HHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
....+.+.++||+|+||.||++...++..+|+|.+.......+.|.+|+.++++++|+|++++++++. ....++||||+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 34467788999999999999999888888999999865556678999999999999999999999885 45689999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..++.++.|++.||+|||+ ++++||||||+||++++++.++|+|||++..+....
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 83 SKGSLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 9999999996432 3458899999999999999999998 899999999999999999999999999998764321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ......... ..
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~-----~~ 222 (260)
T cd05070 157 Y--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-------VLEQVERGY-----RM 222 (260)
T ss_pred c--ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCC-----CC
Confidence 1 11122335678999999998899999999999999999999 899996432111 111111110 00
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
+.+......+.+++.+|++.+|.+||++.++.+.|++
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 -----PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -----CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1111223467889999999999999999999999875
No 53
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.1e-36 Score=318.45 Aligned_cols=255 Identities=30% Similarity=0.460 Sum_probs=203.2
Q ss_pred hcccccccccccccceEEEEEECC----CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLAN----RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
..+.+.+.||+|+||.||+|.+.. ...||||.+... .....+|.+|+.++.+++|+||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 456778899999999999998742 457999998743 23346789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..
T Consensus 84 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 84 TEYMENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEcCCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 99999999999996432 258899999999999999999998 89999999999999999999999999999877
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
..... ........++..|+|||.+.+..++.++||||||+++|||++ |..||....... ..........
T Consensus 157 ~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~-- 226 (266)
T cd05033 157 EDSEA-TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-------VIKAVEDGYR-- 226 (266)
T ss_pred ccccc-ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCCC--
Confidence 52111 111222345678999999999999999999999999999998 999986432111 1111111100
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
. +.+......+.+++.+|++.+|++||++.+|++.|+++
T Consensus 227 --~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 227 --L------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --C------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 11112234577899999999999999999999999865
No 54
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-37 Score=297.58 Aligned_cols=265 Identities=24% Similarity=0.308 Sum_probs=209.7
Q ss_pred HhcccccccccccccceEEEEE-ECCCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCc-----eee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK-----HRL 570 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~ 570 (852)
..+|++.++||+|||..||.++ ..+++.+|+|++... .++.+..++|++..++++||||+++++++..+. ..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4578899999999999999998 677889999999843 466778899999999999999999999876543 589
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
|+++|...|+|.+.+..... .+..+++.+.+.|+.+|++||++||+.. ..++||||||.|||+.+.+.++|.|||.+.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~-kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKI-KGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEeehhccccHHHHHHHHhh-cCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999965433 4668999999999999999999999843 359999999999999999999999999987
Q ss_pred ccCCCC------CcceeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH
Q 003059 651 LINPKD------HRHRTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 651 ~~~~~~------~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 721 (852)
...-.- .....-....-|..|.|||.+. +..+++++|||||||+||+|+.|..||+..-.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------- 246 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------- 246 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-----------
Confidence 653210 0011112345688999999885 45688999999999999999999999974321
Q ss_pred HHHhhCCcc-cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 722 EEFEKGNVK-GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 722 ~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
..+.+. .+....+.- +.+....+.+.+++.+|++.||.+||+..+++..++.+.
T Consensus 247 ---~GgSlaLAv~n~q~s~-P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 ---QGGSLALAVQNAQISI-PNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---cCCeEEEeeecccccc-CCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111111 122222221 222225677889999999999999999999999987653
No 55
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5e-36 Score=317.22 Aligned_cols=250 Identities=26% Similarity=0.416 Sum_probs=201.4
Q ss_pred cccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
.+.+.+.||+|+||.||++...++..+|+|.+........+|.+|++++++++|+||+++++++.+.+..++||||++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 45677899999999999999887778999998755555678899999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.......
T Consensus 85 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-- 155 (256)
T cd05059 85 CLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-- 155 (256)
T ss_pred CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccc--
Confidence 9999996432 258899999999999999999998 8999999999999999999999999999986532111
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ........ ...
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~-----~~~--- 220 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-------VVESVSAG-----YRL--- 220 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-------HHHHHHcC-----CcC---
Confidence 11111223457999999999999999999999999999999 899996443211 01111111 000
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
..+......+.+++.+|++.+|++||++.+|++.|
T Consensus 221 --~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 --YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 01111234677899999999999999999999886
No 56
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.3e-36 Score=330.76 Aligned_cols=243 Identities=25% Similarity=0.291 Sum_probs=196.4
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
..|.+.+.||+|+||.||++... +++.||+|.+.... ...+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 35677889999999999999975 57899999987322 23456889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||||+.++.+||+|||+++...
T Consensus 98 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 98 EFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred cCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 999999999999643 347888889999999999999999 899999999999999999999999999998664
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.. .....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .......++...
T Consensus 170 ~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~--- 233 (329)
T PTZ00263 170 DR------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-------RIYEKILAGRLK--- 233 (329)
T ss_pred CC------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-------HHHHHHhcCCcC---
Confidence 32 12356899999999999999999999999999999999999999643211 011122221110
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
+ +......+.+++.+||+.||.+||+ ++++++
T Consensus 234 ---~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 234 ---F-----PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---C-----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 0011234668889999999999997 566653
No 57
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.4e-36 Score=321.93 Aligned_cols=259 Identities=27% Similarity=0.440 Sum_probs=205.2
Q ss_pred HhcccccccccccccceEEEEEECC------CcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCcee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLAN------RTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~ 569 (852)
..++.+.+.||+|+||.||+|...+ ++.||||.+..... ..+.|.+|++++.+++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 4567788999999999999998633 47899999974332 357899999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHhhhccc---------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc
Q 003059 570 LLVYEFMKNGSLDNFLFANEE---------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN 640 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 640 (852)
++||||+++++|.+++..... .....+++..+..++.|++.||+|||+ ++++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCe
Confidence 999999999999999975431 223458899999999999999999998 89999999999999999999
Q ss_pred eEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHH
Q 003059 641 AKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLW 719 (852)
Q Consensus 641 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 719 (852)
+||+|||+++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .
T Consensus 161 ~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~--- 233 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---V--- 233 (280)
T ss_pred EEECCcccceecccCcce-ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---H---
Confidence 999999999765332111 11122345778999999999999999999999999999998 999986443211 1
Q ss_pred HHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 720 AYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
......+.... .+......+.+++.+||+.||.+||++.||++.|++
T Consensus 234 -~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 -IECITQGRLLQ----------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred -HHHHHcCCcCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 11111111110 111123456788999999999999999999999863
No 58
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=321.66 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=199.9
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEec--CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLE--GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~--~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|+-.+.||+|.||.||||.. ..++.||+|++. ..+...+++++|+.+|..++++||.+.+|.+..+...+++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 344457899999999999996 458899999997 34455678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
.+|++.+.|.. +..+++..+.-|++++..||.|||. .+.+|||||+.|||+..+|.+||+|||.+-.+....
T Consensus 94 ~gGsv~~lL~~-----~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 94 GGGSVLDLLKS-----GNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred cCcchhhhhcc-----CCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 99999999953 3344677777789999999999999 789999999999999999999999999998775432
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. .....+||+.|||||++....|+.|+||||||++.+||++|.+|+....+. ++.-++.+.
T Consensus 166 ~---rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm----------------rvlflIpk~ 226 (467)
T KOG0201|consen 166 K---RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM----------------RVLFLIPKS 226 (467)
T ss_pred h---ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc----------------eEEEeccCC
Confidence 2 226688999999999999889999999999999999999999999754432 122222221
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
-.. ..+......+.+++..|++.||+.||++.++++
T Consensus 227 ~PP-~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 227 APP-RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCC-ccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 111 111122234556667799999999999998874
No 59
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4e-36 Score=318.76 Aligned_cols=254 Identities=29% Similarity=0.485 Sum_probs=206.6
Q ss_pred hcccccccccccccceEEEEEECCCcEEEEEEecCccc-chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQ-GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
..|.+.++||.|+||.||+|...+++.+++|.+..... ...++..|+.+++.++|+||+++++++.+....++||||++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence 45677889999999999999988889999999985443 56789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++.... +..+++..++.++.||+.||+|||+ ++|+|+||||+||++++++.+||+|||++........
T Consensus 86 ~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 86 KGSLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 999999996532 3468999999999999999999998 8999999999999999999999999999986643211
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
......++..|+|||.+....++.++||||||++++||++ |+.||....... . ......+..
T Consensus 160 ---~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~----~~~~~~~~~------- 222 (261)
T cd05148 160 ---LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---V----YDQITAGYR------- 222 (261)
T ss_pred ---cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---H----HHHHHhCCc-------
Confidence 1123345678999999998899999999999999999998 899996443111 1 111111100
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
. +.+......+.+++.+|++.+|.+||++.++++.|+.+
T Consensus 223 ~---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 M---PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 11122234577889999999999999999999999864
No 60
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.5e-36 Score=328.13 Aligned_cols=240 Identities=23% Similarity=0.264 Sum_probs=191.0
Q ss_pred ccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 507 LGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
||+|+||.||++... +++.||+|++... ......+..|++++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999965 5788999998632 23345678899999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~ 149 (312)
T cd05585 81 FHHLQRE-----GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---DK 149 (312)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC---Cc
Confidence 9999643 248899999999999999999998 899999999999999999999999999998643221 12
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... . ......... . .
T Consensus 150 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~-~~~~~~~~~--------~---~ 211 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------E-MYRKILQEP--------L---R 211 (312)
T ss_pred cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------H-HHHHHHcCC--------C---C
Confidence 23456899999999999999999999999999999999999999743221 0 111111110 0 0
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
.+......+.+++.+|++.||.+||++..+.+.|
T Consensus 212 ~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 212 FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 1111223566788899999999998754444444
No 61
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.1e-36 Score=326.54 Aligned_cols=242 Identities=23% Similarity=0.300 Sum_probs=196.1
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||++... +++.||+|++.... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 3567789999999999999965 58899999986322 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 82 YVPGGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999643 348889999999999999999998 8999999999999999999999999999986543
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
. .....|++.|+|||.+.+..++.++|||||||++|||++|+.||....... .......+..
T Consensus 154 ~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-------~~~~i~~~~~----- 215 (291)
T cd05612 154 R------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-------IYEKILAGKL----- 215 (291)
T ss_pred C------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCc-----
Confidence 1 123468999999999999999999999999999999999999997543211 1111111111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
..+......+.+++.+|++.||.+||+ +.++++
T Consensus 216 ------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 216 ------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 011111235678888999999999995 777664
No 62
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=325.40 Aligned_cols=259 Identities=25% Similarity=0.410 Sum_probs=212.9
Q ss_pred HHHHhcccccccccccccceEEEEEECC-----CcEEEEEEecC--cccchHHHHHHHHHhhcccccceeeeeeeeccCc
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLAN-----RTVVAVKQLEG--IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK 567 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~--~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~ 567 (852)
||.++...+.++||.|-||.||+|++.+ .-.||||..+. .....+.|..|..+|++++||||++|+|+|.+.
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~- 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ- 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-
Confidence 5666777788899999999999999532 23689998873 345578899999999999999999999999875
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
..+||||.++-|.|..||..+. ..|+......++.||+.+|+|||+ +++|||||..+|||+....-+||+|||
T Consensus 464 P~WivmEL~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred ceeEEEecccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccc
Confidence 6799999999999999997653 358888899999999999999999 899999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhh
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
++|.+....... .....-++.|||||.+...+++.++|||.|||.+||++. |..||.+-...
T Consensus 537 LSR~~ed~~yYk--aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs--------------- 599 (974)
T KOG4257|consen 537 LSRYLEDDAYYK--ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS--------------- 599 (974)
T ss_pred hhhhccccchhh--ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc---------------
Confidence 999987654432 334556889999999999999999999999999999987 99999754221
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
++...++..-+ -+.++.....+..++.+||..+|.+||.+.++...|+.+..
T Consensus 600 -DVI~~iEnGeR-lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 600 -DVIGHIENGER-LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -ceEEEecCCCC-CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11111211111 13445556677788999999999999999999998887654
No 63
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.5e-36 Score=327.48 Aligned_cols=200 Identities=27% Similarity=0.363 Sum_probs=173.1
Q ss_pred HHhcccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
....|.+.++||+|+||.||++... ++..+|+|.+... .....++.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 3456677889999999999999975 5788999988743 233467999999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+++++|.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++...
T Consensus 83 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 83 EHMDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 999999999999643 3488899999999999999999972 469999999999999999999999999987653
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
.. ......|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 156 ~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 156 DS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred cc-----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 21 123346899999999999999999999999999999999999999643
No 64
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.9e-36 Score=326.55 Aligned_cols=240 Identities=24% Similarity=0.336 Sum_probs=191.5
Q ss_pred ccccccccceEEEEEE----CCCcEEEEEEecCc-----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 505 DKLGAGGFGAVYRGVL----ANRTVVAVKQLEGI-----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~-----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
++||+|+||.||++.. ..++.||+|.++.. ......+..|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 35788999998732 12335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++... ..+.+..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 82 LSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 9999999998543 347788888999999999999998 89999999999999999999999999998754321
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. .......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... .......+.
T Consensus 154 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-------~~~~~~~~~------- 216 (323)
T cd05584 154 G---TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-------TIDKILKGK------- 216 (323)
T ss_pred C---CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCC-------
Confidence 1 12233568999999999999889999999999999999999999997543211 111111111
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
. ..+......+.+++.+|++.+|++|| ++.++++
T Consensus 217 -~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 -L---NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -C---CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0 01111123567888999999999999 7777765
No 65
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.5e-36 Score=321.36 Aligned_cols=258 Identities=29% Similarity=0.457 Sum_probs=201.6
Q ss_pred hcccccccccccccceEEEEEE-----CCCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-----ANRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLL 571 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 571 (852)
..+.+.++||+|+||.||+|.. ..+..|++|.+.... ....++.+|++++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4567788999999999999984 245789999997332 234678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhhhccc------------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC
Q 003059 572 VYEFMKNGSLDNFLFANEE------------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY 639 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~ 639 (852)
||||+++++|.+++..... .....+++..++.++.|++.||+|||+ ++++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence 9999999999999964321 012358899999999999999999998 8999999999999999999
Q ss_pred ceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHH
Q 003059 640 NAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSL 718 (852)
Q Consensus 640 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 718 (852)
.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 162 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~------ 234 (283)
T cd05090 162 HVKISDLGLSREIYSADY-YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE------ 234 (283)
T ss_pred cEEeccccccccccCCcc-eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH------
Confidence 999999999986543221 111223345678999999998899999999999999999998 999986432110
Q ss_pred HHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 719 WAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 719 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
............ .+......+.+++.+|++.+|++||++.+|.+.|..
T Consensus 235 -~~~~~~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 -VIEMVRKRQLLP----------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHcCCcCC----------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111111110 111122456778889999999999999999998864
No 66
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.5e-36 Score=320.88 Aligned_cols=267 Identities=23% Similarity=0.306 Sum_probs=200.1
Q ss_pred cccccccccccceEEEEEE-----CCCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeEE
Q 003059 502 GFKDKLGAGGFGAVYRGVL-----ANRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLLV 572 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV 572 (852)
.+.+.||+|+||.||++.. .+++.||+|.+.... .....|.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778999999999988653 357789999987432 3456788999999999999999999988653 467899
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++.. ..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..
T Consensus 87 ~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 87 MEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 999999999999953 248999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
..............++..|+|||.+....++.++||||||+++|||++|..||......... .............+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE-MIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh-hhcccccccchhhhhhh
Confidence 43222111112234566799999999889999999999999999999999998643221000 00000000000011111
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
++..... +.+......+.+++.+|++.+|.+||++++|+++|+.+.
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRL-PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCC-CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111110 111222346778899999999999999999999998764
No 67
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-35 Score=326.92 Aligned_cols=249 Identities=22% Similarity=0.257 Sum_probs=193.4
Q ss_pred ccccccccccccceEEEEEE----CCCcEEEEEEecCc-----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL----ANRTVVAVKQLEGI-----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~-----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 570 (852)
|.+.++||+|+||.||++.. ..++.||+|++... ....+.+..|++++.++ +|+||+++++++.+++..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 56778999999999999985 35789999998632 12335678899999999 5999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 82 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 82 LILDYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999999643 348899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNV 729 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (852)
....... .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||.......... ........
T Consensus 154 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~~~~~~~~--- 225 (332)
T cd05614 154 EFLSEEK--ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS---EVSRRILK--- 225 (332)
T ss_pred cccccCC--CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH---HHHHHHhc---
Confidence 6533211 122345699999999999865 47889999999999999999999997543221111 01111111
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
.++.+ +......+.+++.+|++.||++|| +++++++
T Consensus 226 ---~~~~~-----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 ---CDPPF-----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ---CCCCC-----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 01111 111223456788899999999999 5666664
No 68
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.9e-36 Score=327.67 Aligned_cols=258 Identities=23% Similarity=0.388 Sum_probs=200.8
Q ss_pred HHhcccccccccccccceEEEEEEC-CCc----EEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCcee
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLA-NRT----VVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~ 569 (852)
....+...+.||+|+||.||+|++. ++. .||+|.++.. ....+++..|+.+++.++||||++++|+|... ..
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 3456777889999999999999853 333 4899998733 33456789999999999999999999999875 57
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++|+||+++|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 84 ~~v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a 156 (316)
T cd05108 84 QLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLA 156 (316)
T ss_pred eeeeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEcccccc
Confidence 7999999999999999653 2358889999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCC
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
+........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||+...... + ......+.
T Consensus 157 ~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~----~~~~~~~~ 228 (316)
T cd05108 157 KLLGADEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---I----SSILEKGE 228 (316)
T ss_pred ccccCCCcc-eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHHhCCC
Confidence 876532211 11122334678999999999999999999999999999998 999997532211 0 01111110
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
.+ +.+......+.+++.+|++.+|.+||++.++++.|..+..
T Consensus 229 -------~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 229 -------RL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred -------CC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 00 0011122356788899999999999999999999887743
No 69
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5e-36 Score=330.11 Aligned_cols=251 Identities=23% Similarity=0.295 Sum_probs=199.6
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||+|... +++.||+|++... ......+..|++++.+++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 3667889999999999999975 4789999999732 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 82 YVPGGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999543 348889999999999999999998 8999999999999999999999999999986532
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ...+... ...+.
T Consensus 154 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-------~~~i~~~--~~~~~ 218 (333)
T cd05600 154 ------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-------WENLKYW--KETLQ 218 (333)
T ss_pred ------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-------HHHHHhc--ccccc
Confidence 22345689999999999999999999999999999999999999975432111 0111100 00111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..... .........+.+++.+|++.+|.+||++.++++.
T Consensus 219 ~~~~~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 RPVYD-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCC-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00000 0001123456678888999999999999999864
No 70
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.2e-35 Score=327.86 Aligned_cols=264 Identities=20% Similarity=0.308 Sum_probs=193.6
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC-----ceeeE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG-----KHRLL 571 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~l 571 (852)
|.+.++||+|+||.||+|... +++.||||++... .....++.+|++++++++||||+++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 567889999999999999964 5889999998732 23345688999999999999999999987543 35799
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
||||+. ++|.+++... ..+++..+..++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 v~e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 82 VFELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 999995 6899888533 348899999999999999999999 8999999999999999999999999999986
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhc--CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHH--------HHH
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLAN--LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSL--------WAY 721 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~--------~~~ 721 (852)
...............|++.|+|||++.+ ..++.++|||||||++|||++|+.||............. ...
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 5332222122234568999999999876 678999999999999999999999996543211100000 000
Q ss_pred HHHhhCCcccccccccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+........+............ ....+.+++.+|++.||++||++.|+++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000001111111110000011111 1134578899999999999999999985
No 71
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.5e-36 Score=322.67 Aligned_cols=271 Identities=24% Similarity=0.326 Sum_probs=197.8
Q ss_pred cccccccccccccceEEEEEEC-----CCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeecc--CceeeE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-----NRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSE--GKHRLL 571 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l 571 (852)
.+.+.+.||+|+||.||++... +++.|++|++... ....+.|.+|++++.+++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 4567789999999999999742 4778999998743 3345678999999999999999999998754 346899
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
||||+++++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.
T Consensus 85 v~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 85 VMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 99999999999999543 2358999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
...............++..|+|||.+.+..++.++||||||+++|||++|..++......-................+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 64322211111112234569999999988999999999999999999998877543221100000000000000000000
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.+..... .+.+......+.+++.+|++.+|++|||+.+|++.|+.+
T Consensus 238 ~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 238 LLKNNGR-LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHhcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1110000 011112234577889999999999999999999999876
No 72
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-35 Score=314.59 Aligned_cols=255 Identities=29% Similarity=0.431 Sum_probs=203.8
Q ss_pred HHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
....+.+.++||+|+||.||++...++..+++|.+.......+.+.+|+.++++++|+|++++++++. .+..++||||+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 34567788999999999999999877778999998765556678999999999999999999999875 45689999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||+++......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 83 GKGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999996532 3458899999999999999999998 899999999999999999999999999998664321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ......... ..
T Consensus 157 ~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~-----~~ 222 (260)
T cd05069 157 Y--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-------VLEQVERGY-----RM 222 (260)
T ss_pred c--cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCC-----CC
Confidence 1 11122345678999999998899999999999999999999 899996432211 011111110 00
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
..+......+.+++.+|++.+|.+||++++|++.|++
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -----PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1111223457788899999999999999999999975
No 73
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-35 Score=314.88 Aligned_cols=246 Identities=26% Similarity=0.406 Sum_probs=193.8
Q ss_pred cccccccceEEEEEE---CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 506 KLGAGGFGAVYRGVL---ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~---~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+||+|+||.||+|.+ .++..+|+|+++... ...+++..|+.++++++|+||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 699999999999975 356889999987332 23467899999999999999999999885 45678999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.+.......
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 81 PLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 999999533 358899999999999999999998 899999999999999999999999999998765432211
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......++..|+|||.+....++.++||||||+++|||++ |+.||...... .. ......+...
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~----~~~i~~~~~~-------- 217 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EV----TQMIESGERM-------- 217 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHHCCCCC--------
Confidence 11122334678999999988889999999999999999998 99999754321 11 1111111110
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
..+......+.+++.+|++.||++||++.+|++.|++
T Consensus 218 --~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 218 --ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1111123456788999999999999999999999975
No 74
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.3e-36 Score=328.38 Aligned_cols=237 Identities=24% Similarity=0.315 Sum_probs=190.2
Q ss_pred ccccccccceEEEEEE----CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 505 DKLGAGGFGAVYRGVL----ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
+.||+|+||.||++.. .+++.||+|++.... .....+..|++++.+++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 357899999997432 233557789999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++... ..+++..+..++.||++||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~- 152 (318)
T cd05582 82 GGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE- 152 (318)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-
Confidence 99999998543 348899999999999999999998 899999999999999999999999999988653321
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
.......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ..........
T Consensus 153 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-------~~~~i~~~~~-------- 215 (318)
T cd05582 153 --KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-------TMTMILKAKL-------- 215 (318)
T ss_pred --CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-------HHHHHHcCCC--------
Confidence 12234568999999999998889999999999999999999999997543211 1111111110
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHH
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGK 770 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~e 770 (852)
..+......+.+++.+|++.||++||++.+
T Consensus 216 ---~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 ---GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 011111234567888899999999999666
No 75
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9.7e-36 Score=318.95 Aligned_cols=260 Identities=24% Similarity=0.388 Sum_probs=201.7
Q ss_pred HHhcccccccccccccceEEEEEEC------CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCce
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKH 568 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~ 568 (852)
....+.+.++||+|+||.||+|... .+..||+|++.... ....+|.+|+.+++.++|+||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4456778899999999999999753 24679999986322 234578899999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHhhhcccC-----CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEE
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEG-----SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKV 643 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 643 (852)
.++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence 99999999999999999653211 12356888999999999999999998 89999999999999999999999
Q ss_pred eecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHH
Q 003059 644 SDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYE 722 (852)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~ 722 (852)
+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... . ..
T Consensus 161 ~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~----~~ 232 (277)
T cd05062 161 GDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---V----LR 232 (277)
T ss_pred CCCCCccccCCccee-ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HH
Confidence 999998765432111 11112345778999999999999999999999999999999 788886443211 0 11
Q ss_pred HHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 723 EFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
......... .+......+.+++.+|++.+|++||++.|+++.|++
T Consensus 233 ~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGGLLD----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111111111 011122357788999999999999999999998863
No 76
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.5e-35 Score=325.34 Aligned_cols=241 Identities=23% Similarity=0.263 Sum_probs=193.0
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.||+|+||.||++... +++.||+|++... ......+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 5889999999732 233457788999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..... .
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---~ 149 (328)
T cd05593 81 ELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---A 149 (328)
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCc---c
Confidence 999988543 358899999999999999999998 89999999999999999999999999998754221 1
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAG 739 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (852)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ........ .
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~-------~~~~~~~~------~---- 212 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------FELILMED------I---- 212 (328)
T ss_pred cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH-------HHHhccCC------c----
Confidence 122345689999999999999999999999999999999999999964322110 00110000 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 003059 740 EDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQM 774 (852)
Q Consensus 740 ~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~~ 774 (852)
..+......+.+++.+|++.||.+|| ++.++++.
T Consensus 213 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 -KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 11111223567788899999999997 78888753
No 77
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9e-36 Score=320.21 Aligned_cols=258 Identities=25% Similarity=0.384 Sum_probs=202.2
Q ss_pred hcccccccccccccceEEEEEECC------CcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLAN------RTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
..+.+.++||+|+||.||+|...+ ++.||+|++..... ..+.|..|+.++.+++||||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 456677899999999999998632 47899999974332 2466889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC
Q 003059 571 LVYEFMKNGSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY 639 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~ 639 (852)
+++||+++++|.+++..... .....+++..++.++.|++.||+|||+ ++|+||||||+|||+++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCC
Confidence 99999999999999853211 112458888999999999999999998 8999999999999999999
Q ss_pred ceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHH
Q 003059 640 NAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSL 718 (852)
Q Consensus 640 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 718 (852)
.+||+|||+++....... ........+++.|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 162 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------ 234 (283)
T cd05091 162 NVKISDLGLFREVYAADY-YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------ 234 (283)
T ss_pred ceEecccccccccccchh-eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH------
Confidence 999999999886643221 112233446789999999998899999999999999999998 888886432211
Q ss_pred HHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 719 WAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 719 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
........... ..+......+.+++..|++.+|.+||++++|++.|+.
T Consensus 235 -~~~~i~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 -VIEMIRNRQVL----------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHHcCCcC----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11122222111 1111223446788899999999999999999999864
No 78
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-35 Score=316.32 Aligned_cols=256 Identities=29% Similarity=0.464 Sum_probs=201.7
Q ss_pred hcccccccccccccceEEEEEECC-C---cEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLAN-R---TVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
..++..+.||+|+||.||+|.... + ..+++|.+... ....+++..|++++.+++|+||+++++++.+.+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 345667899999999999999642 2 37999988743 23356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++...
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 85 TEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999998543 2358999999999999999999998 89999999999999999999999999999866
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
...............+..|+|||.+....++.++||||||+++|||++ |+.||....... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-------~~~~i~~~~--- 227 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-------VMKAINDGF--- 227 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-------HHHHHhcCC---
Confidence 432222111112223567999999998889999999999999999998 999996432211 111111110
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.. +........+.+++.+|++.+|.+||++.+|++.|+++
T Consensus 228 -~~------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 -RL------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -CC------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 11112234577899999999999999999999999875
No 79
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-35 Score=313.27 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=194.0
Q ss_pred cccccccceEEEEEEC---CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCC
Q 003059 506 KLGAGGFGAVYRGVLA---NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGS 580 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gs 580 (852)
.||+|+||.||+|.+. .+..||+|++.... ...++|.+|+.++++++|+||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999864 34569999987432 23467899999999999999999999885 457899999999999
Q ss_pred HHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcce
Q 003059 581 LDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHR 660 (852)
Q Consensus 581 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 660 (852)
|.+++... ...+++..+++++.|++.||+|||+ ++++||||||+|||++.++.+||+|||+++..........
T Consensus 81 L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 81 LNKFLSGK----KDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred HHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99998543 2358899999999999999999998 8999999999999999999999999999986543322211
Q ss_pred eeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCC
Q 003059 661 TLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAG 739 (852)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (852)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .......+...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~--------- 217 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-------VMSFIEQGKRL--------- 217 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCCCC---------
Confidence 1222234678999999998889999999999999999996 999997543211 11111111100
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 740 EDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 740 ~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
..+......+.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 218 -~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 -DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11122234566788999999999999999999998764
No 80
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.4e-36 Score=329.26 Aligned_cols=263 Identities=28% Similarity=0.429 Sum_probs=202.8
Q ss_pred HhcccccccccccccceEEEEEEC------CCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeeecc-Cc
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFSSE-GK 567 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~-~~ 567 (852)
..+|.+.+.||+|+||.||+|... .++.||+|++... ....+.+..|++++.++ +|+||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 456788899999999999999742 2468999998743 22345678899999999 89999999998764 45
Q ss_pred eeeEEEeecCCCCHHHHhhhcccC--------------------------------------------------------
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEG-------------------------------------------------------- 591 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 591 (852)
..+++|||+++++|.+++......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 788999999999999998643210
Q ss_pred CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCC
Q 003059 592 SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGY 671 (852)
Q Consensus 592 ~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y 671 (852)
....++|..+.+++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.+...... .......++..|
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~-~~~~~~~~~~~y 241 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-VRKGDARLPLKW 241 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch-hhccCCCCCccc
Confidence 01368999999999999999999998 89999999999999999999999999999876432111 112234467789
Q ss_pred CChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHH
Q 003059 672 LAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRA 750 (852)
Q Consensus 672 ~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 750 (852)
+|||++.+..++.++|||||||++|||++ |+.||......+ .+ ......+... ..+......+
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~----~~~~~~~~~~----------~~~~~~~~~~ 305 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EF----CRRLKEGTRM----------RAPEYATPEI 305 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HH----HHHHhccCCC----------CCCccCCHHH
Confidence 99999999999999999999999999998 999996532211 10 1111111100 0111223467
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 751 IQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 751 ~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
.+++.+|++.+|++||++.||++.|+.+..
T Consensus 306 ~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 306 YSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 888999999999999999999999987643
No 81
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.4e-36 Score=321.54 Aligned_cols=263 Identities=21% Similarity=0.272 Sum_probs=197.6
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.|.+.+.||+|+||.||+++.. +++.||+|++... ....+.+.+|++++.+++|+||+++++++.+.+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 4667889999999999999975 5788999998743 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
++++.+..+... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 82 VEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred CCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 998877655421 2358889999999999999999998 89999999999999999999999999999876432
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------HHHH-hh
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA--------YEEF-EK 726 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~-~~ 726 (852)
.. .......|+..|+|||.+.+..++.++|||||||++|||++|+.||......+........ .... ..
T Consensus 154 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07848 154 SN--ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSN 231 (287)
T ss_pred cc--ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhcc
Confidence 11 1223456899999999999989999999999999999999999999754322111000000 0000 00
Q ss_pred CCcccccccccCCCCCCH------HHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDVDI------EQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~------~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
........+.... .... .....+.+++.+|++.||++||+++++++
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 232 PRFHGLRFPAVNH-PQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred chhcccccCcccC-cccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000 0000 01235788999999999999999999875
No 82
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.2e-35 Score=320.68 Aligned_cols=261 Identities=26% Similarity=0.436 Sum_probs=205.9
Q ss_pred hcccccccccccccceEEEEEEC------CCcEEEEEEecCcc-cchHHHHHHHHHhhcccccceeeeeeeeccCceeeE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIE-QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLL 571 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 571 (852)
..+.+.+.||+|+||.||++... ++..+++|.+.... ...+.+.+|++++++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 44667789999999999999742 34568999987433 334679999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc
Q 003059 572 VYEFMKNGSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN 640 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 640 (852)
||||+++++|.+++..... .....+++..++.++.||+.||+|||+ ++|+||||||+|||+++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence 9999999999999965431 122358999999999999999999998 89999999999999999999
Q ss_pred eEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHH
Q 003059 641 AKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLW 719 (852)
Q Consensus 641 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 719 (852)
+||+|||++........ ........++..|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 162 ~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------- 233 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE------- 233 (291)
T ss_pred EEECCCCcccccCCCce-eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 99999999976543211 111223446788999999999999999999999999999999 999986433211
Q ss_pred HHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 720 AYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
.......+..... .......+.+++.+|++.+|.+||++.+|+++|+.+.+
T Consensus 234 ~~~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 234 VIECITQGRVLER----------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHhCCCCCCC----------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 1111111111110 11123457789999999999999999999999998855
No 83
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=9.4e-36 Score=320.97 Aligned_cols=263 Identities=22% Similarity=0.326 Sum_probs=195.4
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|.+.++||+|+||.||+|... +++.||+|.+... ......+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 85 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYL 85 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCC
Confidence 4677889999999999999865 5789999998732 233456789999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++ +|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 86 ~~-~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 86 DS-DLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred Cc-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 75 899988543 2357888999999999999999998 899999999999999999999999999997653221
Q ss_pred CcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH-----HHHhh----
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY-----EEFEK---- 726 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-----~~~~~---- 726 (852)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+......... ..+..
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 158 ---KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred ---ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence 12233457899999999865 568999999999999999999999997543221111000000 00000
Q ss_pred CCcccccccccCCCCC---CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDV---DIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~---~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
........+....... .......+.+++.+|++.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000001010000000 0011235678899999999999999999874
No 84
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-35 Score=324.89 Aligned_cols=201 Identities=27% Similarity=0.374 Sum_probs=173.7
Q ss_pred HHHhcccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
|....|.+.++||+|+||.||++... ++..+|+|.+... .....++.+|++++++++|+||+++++++.++++.++|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 44567788899999999999999975 5778999988743 23346789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||++...
T Consensus 82 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 154 (333)
T cd06650 82 MEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (333)
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence 9999999999999643 3478889999999999999999972 47999999999999999999999999998765
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
... ......|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 155 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 155 IDS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hhh-----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 321 122346899999999999989999999999999999999999999744
No 85
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.1e-35 Score=313.21 Aligned_cols=257 Identities=32% Similarity=0.463 Sum_probs=208.5
Q ss_pred HHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+....+.+.++||+|+||.||++..++++.|+||.+.......+++.+|+.++++++|+||+++++++......++||||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 44567788899999999999999988888899999986666678899999999999999999999999998999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++.+...
T Consensus 83 ~~~~~L~~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 83 MSKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred cCCCCHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999996532 3458999999999999999999998 89999999999999999999999999999866431
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. ........+..|+|||.+.+..++.++||||||++++||++ |+.||....... .......+ ..
T Consensus 157 ~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-------~~~~~~~~-----~~ 222 (261)
T cd05034 157 EY--TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-------VLEQVERG-----YR 222 (261)
T ss_pred hh--hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcC-----CC
Confidence 11 11122334678999999998899999999999999999999 999996432211 11111111 00
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
. ..+......+.+++.+|++.+|++||+++++++.|+.
T Consensus 223 ~-----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 M-----PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred C-----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0 0111113457788999999999999999999999875
No 86
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-36 Score=314.13 Aligned_cols=257 Identities=23% Similarity=0.302 Sum_probs=200.4
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCccc---------------chHHHHHHHHHhhcccccceeeeeeee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQ---------------GEKQFRMEVATISSTHHLNLVRLVGFS 563 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---------------~~~~f~~E~~~l~~l~h~niv~l~g~~ 563 (852)
.|.+.+.||+|.||.|-+|.. .+++.||||++.+.+. ..++..+||.+|++++|||||+|+.+.
T Consensus 98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL 177 (576)
T KOG0585|consen 98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL 177 (576)
T ss_pred heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence 567778999999999999995 4689999999964321 125788999999999999999999998
Q ss_pred cc--CceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCce
Q 003059 564 SE--GKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNA 641 (852)
Q Consensus 564 ~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 641 (852)
.+ .+..|||+|||..|.+...- .....|+..+.+++++++..||+|||. .+||||||||+|+||+++|++
T Consensus 178 DDP~s~~~YlVley~s~G~v~w~p-----~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 178 DDPESDKLYLVLEYCSKGEVKWCP-----PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred cCcccCceEEEEEeccCCccccCC-----CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCcE
Confidence 65 55899999999988765422 112239999999999999999999999 899999999999999999999
Q ss_pred EEeecccccccCCCC--CcceeeeeecCCCCCCChhhhhcCC----CCCCccchhhhHHHHHHHhCCccccccccccchh
Q 003059 642 KVSDFGLAKLINPKD--HRHRTLTSVRGTRGYLAPEWLANLP----ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKK 715 (852)
Q Consensus 642 kl~DFGla~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~ 715 (852)
||+|||.+..+.... ..........||+.|+|||...++. .+.+.||||+||+||-|+.|+.||-....
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----- 324 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----- 324 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH-----
Confidence 999999998763221 1122234478999999999987632 35688999999999999999999964321
Q ss_pred hHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 716 FSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 716 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
...+. .++...+.- +...+.-+.+-+++.++|++||+.|.+..+|.....-...
T Consensus 325 --~~l~~--------KIvn~pL~f-P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 325 --LELFD--------KIVNDPLEF-PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred --HHHHH--------HHhcCcccC-CCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 11111 223333322 2233456677889999999999999999999887765544
No 87
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.2e-35 Score=323.28 Aligned_cols=240 Identities=25% Similarity=0.279 Sum_probs=191.9
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.||+|+||.||++.. .+++.||+|.+... ......+..|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999986 45889999998732 223456778999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|..++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 149 (323)
T cd05595 81 ELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--- 149 (323)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC---
Confidence 999988543 358899999999999999999998 899999999999999999999999999987532211
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAG 739 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (852)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||....... .......... .+
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-------~~~~~~~~~~------~~-- 214 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-------LFELILMEEI------RF-- 214 (323)
T ss_pred CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHhcCCC------CC--
Confidence 12234568999999999999999999999999999999999999996443211 0111111100 01
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 740 EDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 740 ~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
+......+.+++.+|++.||++|| ++.++++
T Consensus 215 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 215 ---PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ---CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 111223566788889999999998 7887765
No 88
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.7e-35 Score=319.33 Aligned_cols=259 Identities=26% Similarity=0.399 Sum_probs=202.0
Q ss_pred ccccccccccccceEEEEEEC------CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
+.+.+.||+|+||.||+|+.. ....+++|.+.... ....++.+|+.+++.++||||+++++.+.+.+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 456788999999999999853 23578898887432 2346788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhccc-------------------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCce
Q 003059 573 YEFMKNGSLDNFLFANEE-------------------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENI 633 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI 633 (852)
+||+++++|.+++..... .....+++..++.++.|++.||+|||+ .+|+||||||+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~ni 158 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNV 158 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhheE
Confidence 999999999999864321 112458899999999999999999998 8999999999999
Q ss_pred EeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCcccccccccc
Q 003059 634 LLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETN 712 (852)
Q Consensus 634 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~ 712 (852)
|+++++.+||+|||+++......... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYV-KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEcCCCcEEeccccccccccCccchh-cccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 99999999999999998654322211 1122345678999999988899999999999999999998 999996443211
Q ss_pred chhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 713 RKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 713 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
+ ....... . .. ..+......+.+++.+|++.+|++||++.++++.|+++..
T Consensus 238 ---~----~~~~~~~-~----~~-----~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 ---L----FNLLKTG-Y----RM-----ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred ---H----HHHHhCC-C----CC-----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1 1111111 0 00 1111123467788999999999999999999999988653
No 89
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.5e-35 Score=332.13 Aligned_cols=266 Identities=25% Similarity=0.388 Sum_probs=205.5
Q ss_pred HHHHHhcccccccccccccceEEEEEEC------CCcEEEEEEecCcc--cchHHHHHHHHHhhccc-ccceeeeeeeec
Q 003059 494 KELQRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIE--QGEKQFRMEVATISSTH-HLNLVRLVGFSS 564 (852)
Q Consensus 494 ~el~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~-h~niv~l~g~~~ 564 (852)
.++....+.+.++||+|+||.||+|.+. .+..||+|+++... ...+.+.+|++++.++. ||||++++++|.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3555566777899999999999999864 24679999998432 22356889999999997 999999999999
Q ss_pred cCceeeEEEeecCCCCHHHHhhhccc------------------------------------------------------
Q 003059 565 EGKHRLLVYEFMKNGSLDNFLFANEE------------------------------------------------------ 590 (852)
Q Consensus 565 ~~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------ 590 (852)
..+..++||||+++|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999975421
Q ss_pred ---------------------------------------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCC
Q 003059 591 ---------------------------------------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPE 631 (852)
Q Consensus 591 ---------------------------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~ 631 (852)
.....+++..++.++.||+.||+|||+ .+++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcc
Confidence 012357788899999999999999998 89999999999
Q ss_pred ceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCcccccccc
Q 003059 632 NILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQE 710 (852)
Q Consensus 632 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~ 710 (852)
|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred eEEEeCCCEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999865322111 11122346788999999998899999999999999999998 8899864321
Q ss_pred ccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 711 TNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
... .......+.. + ..+......+.+++..||+.+|.+||++.+|++.|+++.
T Consensus 348 ~~~------~~~~~~~~~~-------~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NEQ------FYNAIKRGYR-------M---AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hHH------HHHHHHcCCC-------C---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 110 1111111100 0 011112345678888999999999999999999998763
No 90
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.9e-35 Score=319.39 Aligned_cols=263 Identities=27% Similarity=0.411 Sum_probs=206.0
Q ss_pred HHHhcccccccccccccceEEEEEEC------CCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeeeccC
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFSSEG 566 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~ 566 (852)
+....+.+.+.||+|+||.||++... +...+|+|.+... .....++.+|++++.++ +|+||+++++++.++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34456677889999999999999863 2367999998743 23345688999999999 899999999999999
Q ss_pred ceeeEEEeecCCCCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl 635 (852)
+..++||||+++|+|.+++..... .....+++..+++++.|++.||+|||+ .+|+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEE
Confidence 999999999999999999964321 234568999999999999999999998 899999999999999
Q ss_pred CCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccch
Q 003059 636 DENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRK 714 (852)
Q Consensus 636 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~ 714 (852)
++++.+||+|||+++.+...... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-- 242 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYY-RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-- 242 (293)
T ss_pred cCCCeEEeCccccccccccccce-eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--
Confidence 99999999999999876432211 11122335678999999998899999999999999999998 999986433211
Q ss_pred hhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 715 KFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 715 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
.......+... ..+......+.+++.+|++.+|++||++.++++.|+.+.
T Consensus 243 -----~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 -----LFKLLKEGYRM----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -----HHHHHHcCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111111100 111222346778999999999999999999999998764
No 91
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1e-35 Score=318.54 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=195.3
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCccc----chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQ----GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.+...||+|+||.||+++.+ .|..+|+|++++... ..+..+.|-.+|....+|+||+|+-.|.+.++.||||||
T Consensus 143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEy 222 (550)
T KOG0605|consen 143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEY 222 (550)
T ss_pred chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEe
Confidence 344578999999999999954 589999999985432 335577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC-
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP- 654 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~- 654 (852)
++||++..+|... ..|+......++.+++-|+.-||+ .|+|||||||+|+|||..|++||+||||+.-+..
T Consensus 223 lPGGD~mTLL~~~-----~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 223 LPGGDMMTLLMRK-----DTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred cCCccHHHHHHhc-----CcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999654 358999999999999999999999 9999999999999999999999999999853311
Q ss_pred --------------------CCCcc-----------------------eeeeeecCCCCCCChhhhhcCCCCCCccchhh
Q 003059 655 --------------------KDHRH-----------------------RTLTSVRGTRGYLAPEWLANLPITSKSDVYSY 691 (852)
Q Consensus 655 --------------------~~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~ 691 (852)
..+.. ......+|||.|||||++.+..|+..+|.|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00000 00113469999999999999999999999999
Q ss_pred hHHHHHHHhCCccccccccccc-hhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCC---
Q 003059 692 GMVLLEIVSGRRNFEVSQETNR-KKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM--- 767 (852)
Q Consensus 692 Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt--- 767 (852)
|||+||||.|-+||........ ..+..|... +.. +...+...++.++|.+|+. ||++|--
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~--------------l~f-P~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRET--------------LKF-PEEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh--------------ccC-CCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 9999999999999986654321 122222110 100 1112222566788888888 9999975
Q ss_pred HHHHHH
Q 003059 768 MGKVVQ 773 (852)
Q Consensus 768 ~~ev~~ 773 (852)
++||.+
T Consensus 439 ~~EIK~ 444 (550)
T KOG0605|consen 439 AEEIKK 444 (550)
T ss_pred HHHHhc
Confidence 555543
No 92
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.8e-35 Score=317.17 Aligned_cols=255 Identities=24% Similarity=0.355 Sum_probs=197.3
Q ss_pred cccccccccccccceEEEEEEC-CCc----EEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRT----VVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
.+.+.+.||+|+||.||+|.+. +++ .+++|.+... .....++..|+..++++.||||+++++++.. ...++|
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 4556788999999999999863 333 4778887632 2234577888989999999999999998864 567899
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
+||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++++||||||+|||+++++.+||+|||+++..
T Consensus 87 ~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 87 TQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 9999999999999643 2358999999999999999999998 88999999999999999999999999999866
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
.... .........++..|+|||.+.+..++.++||||||+++|||++ |+.||....... . ...+..+...
T Consensus 160 ~~~~-~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~----~~~~~~~~~~- 230 (279)
T cd05111 160 YPDD-KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---V----PDLLEKGERL- 230 (279)
T ss_pred cCCC-cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHHHCCCcC-
Confidence 4322 1122233457788999999999999999999999999999998 999996542211 0 1111111100
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
..+. . ....+.+++.+|+..+|.+||++.|+++.|+.+..
T Consensus 231 -~~~~----~----~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 -AQPQ----I----CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -CCCC----C----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 0010 1 12345677889999999999999999999988654
No 93
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-35 Score=318.11 Aligned_cols=249 Identities=23% Similarity=0.378 Sum_probs=206.9
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCce-eeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKH-RLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~-~~lV~e 574 (852)
.|.+.+++|+|+||.++..+. .+++.+++|.+.... ...+...+|+.++++++|||||.+.+.+.+++. .+|||+
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~ 84 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVME 84 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEe
Confidence 466778999999999998874 356789999987333 233456899999999999999999999999888 999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|++||+|.+.|.... +..++++.+.+++.||+.|+.|||+ ..|+|||||++||++..+..+||+|||+|+.+.+
T Consensus 85 Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 85 YCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred ecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 999999999997654 5678999999999999999999997 8899999999999999999999999999999876
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. .......||+.||.||.+.+.+|..|+|||||||++|||++-+++|+..+... + . .........
T Consensus 159 ~~---~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~---L---i-----~ki~~~~~~ 224 (426)
T KOG0589|consen 159 ED---SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE---L---I-----LKINRGLYS 224 (426)
T ss_pred ch---hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH---H---H-----HHHhhccCC
Confidence 43 23456789999999999999999999999999999999999999997654221 0 0 001111111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+.+......+..++..|++.+|+.||++.+++.+
T Consensus 225 ------Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 ------PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ------CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 3444455667778888999999999999999865
No 94
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.7e-35 Score=312.36 Aligned_cols=257 Identities=26% Similarity=0.444 Sum_probs=206.8
Q ss_pred HHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
++..+++.+.++||+|+||.||++.+.++..+++|.+.......+.|.+|++++++++|+||+++++++.+ ...++|||
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 45567888899999999999999998788889999988655556789999999999999999999999887 78899999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 81 FMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred eCCCCcHHHHHHhCC---ccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 999999999996532 3458899999999999999999998 8999999999999999999999999999976543
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
... .......++..|+|||.+....++.++||||||+++||+++ |+.||....... + ......+...
T Consensus 155 ~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~----~~~~~~~~~~--- 222 (260)
T cd05073 155 NEY--TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---V----IRALERGYRM--- 222 (260)
T ss_pred CCc--ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---H----HHHHhCCCCC---
Confidence 211 11122345678999999998889999999999999999999 999996432211 0 1111111100
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
+........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 -------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 -------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1111223457788899999999999999999999975
No 95
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3e-35 Score=311.40 Aligned_cols=249 Identities=29% Similarity=0.424 Sum_probs=196.8
Q ss_pred ccccccccceEEEEEECC----CcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLAN----RTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
++||+|+||.||+|.+.. +..+|+|.+..... ..+++..|+++++++.|+||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999998532 26899999884443 5678999999999999999999999876 4568999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++.... .+++..+..++.|++.+|+|||+ .+++||||||+|||++.++.+||+|||+++.+......
T Consensus 80 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 80 GPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 99999996432 58899999999999999999998 88999999999999999999999999999876443222
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .+.. ........
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~----~~~~~~~~------- 217 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIA----MLESGERL------- 217 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHHcCCcC-------
Confidence 111222334568999999999999999999999999999998 99999654321 1111 11111100
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
..+......+.+++.+|++.+|.+||++.+|++.|+++.
T Consensus 218 ---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 ---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 011112245678899999999999999999999998764
No 96
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-35 Score=324.38 Aligned_cols=236 Identities=25% Similarity=0.309 Sum_probs=185.3
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHH-HhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVA-TISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||+++.. +++.||+|++.... ....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999974 57889999986321 22344555554 57889999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|..++... ..++...+..++.||++||+|||+ .+|+||||||+||||+.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 150 (321)
T cd05603 81 GELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-- 150 (321)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--
Confidence 9999888542 347788888999999999999998 899999999999999999999999999987532211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||....... ........ .+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~i~~~--------~~- 213 (321)
T cd05603 151 -ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-------MYDNILHK--------PL- 213 (321)
T ss_pred -CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-------HHHHHhcC--------CC-
Confidence 12234568999999999999999999999999999999999999996543110 11111111 11
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
..+......+.+++.+|++.+|.+||+..
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 --QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11112234567889999999999999764
No 97
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.2e-35 Score=311.45 Aligned_cols=247 Identities=27% Similarity=0.390 Sum_probs=194.8
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
++||+|+||.||+|... +++.||+|.+... ......+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 47999999999999964 6888999987632 33456789999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++... ...+++..++.++.|+++||+|||+ .+++||||||+|||++.++.+||+|||+++........ ..
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~ 152 (252)
T cd05084 81 LTFLRTE----GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-ST 152 (252)
T ss_pred HHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCccccccccc-cc
Confidence 9998532 2358899999999999999999998 89999999999999999999999999998764321110 00
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGE 740 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (852)
......+..|+|||.+.+..++.++||||||+++|||++ |..||....... ........ ...
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~~~~~~~~---------~~~- 215 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------TREAIEQG---------VRL- 215 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------HHHHHHcC---------CCC-
Confidence 111123457999999999899999999999999999998 888886432211 01111110 000
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 741 DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 741 ~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
..+......+.+++.+|++.+|++||++.+|.++|+
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 216 PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 111122346778899999999999999999999986
No 98
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.5e-35 Score=319.41 Aligned_cols=262 Identities=27% Similarity=0.442 Sum_probs=205.8
Q ss_pred HhcccccccccccccceEEEEEEC------CCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
+..+.+.+.||+|+||.||++... ++..+|+|.+... ......+.+|++++.+++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 345667789999999999999842 3456899988743 334567999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhccc--------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceE
Q 003059 571 LVYEFMKNGSLDNFLFANEE--------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAK 642 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 642 (852)
+||||+++++|.+++..... .....+++..++.++.|++.||+|||+ ++++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEE
Confidence 99999999999999964421 122358999999999999999999998 8999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHH
Q 003059 643 VSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 643 l~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 721 (852)
|+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 161 l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-------~~ 232 (288)
T cd05093 161 IGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VI 232 (288)
T ss_pred eccCCccccccCCce-eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HH
Confidence 999999986543211 111222335778999999999899999999999999999998 899986443211 11
Q ss_pred HHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
.....+.... ... . ....+.+++.+|++.+|.+||++.+|.+.|+.+..
T Consensus 233 ~~i~~~~~~~-----~~~-~----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 233 ECITQGRVLQ-----RPR-T----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHHcCCcCC-----CCC-C----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1111111111 000 1 12357889999999999999999999999988764
No 99
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.6e-36 Score=328.35 Aligned_cols=246 Identities=26% Similarity=0.313 Sum_probs=197.8
Q ss_pred HHhcccccccccccccceEEEEEECC--CcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLAN--RTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
....|.+.++||+|+||.||+|...+ +..||+|++... ....+.+.+|++++..++||||+++++++.+++..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 34457788999999999999998543 368999998632 233456889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 108 lv~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence 999999999999999643 348899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+..
T Consensus 180 ~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~~i~~~~~- 245 (340)
T PTZ00426 180 VVDTR------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-------LIYQKILEGII- 245 (340)
T ss_pred ecCCC------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-------HHHHHHhcCCC-
Confidence 65421 23456899999999999989999999999999999999999999754321 11111111111
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 003059 731 GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQM 774 (852)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~~ 774 (852)
.+ +......+.+++.+|++.||++|+ +++++++.
T Consensus 246 -----~~-----p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -----YF-----PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----CC-----CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 00 111123456788899999999995 78887753
No 100
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-35 Score=341.23 Aligned_cols=252 Identities=18% Similarity=0.217 Sum_probs=199.0
Q ss_pred cccccccccccccceEEEEEEC-C-CcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-N-RTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|.+.+.||+|+||.||+|... + ++.|++|.+... ......+..|+.++++++||||+++++++..++..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3778899999999999999853 3 567888876533 333456788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++|+|.++|..... ....+++..+..++.||+.||.|||+ ++|+||||||+||||+.++.+||+|||+++.+....
T Consensus 148 ~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 148 SGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 99999999864322 23468889999999999999999998 899999999999999999999999999998764321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+... +
T Consensus 224 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-------~~~~~~~~~~~----~- 290 (478)
T PTZ00267 224 S-LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-------IMQQVLYGKYD----P- 290 (478)
T ss_pred c-cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCCC----C-
Confidence 1 112234569999999999999999999999999999999999999996432210 01111111111 0
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.+......+.+++.+|++.+|++||++.++++
T Consensus 291 -----~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 -----FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -----CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11112235678888999999999999998864
No 101
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.1e-35 Score=330.01 Aligned_cols=244 Identities=25% Similarity=0.387 Sum_probs=188.7
Q ss_pred cccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 502 GFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
.+.++||+|+||.||+++.. +++.||||++... ......+.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 156 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG 156 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence 34678999999999999964 5789999998633 23346789999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.... .+.+..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.+....
T Consensus 157 ~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-- 222 (353)
T PLN00034 157 GSLEGTH---------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-- 222 (353)
T ss_pred Ccccccc---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc--
Confidence 9986532 24567788899999999999998 899999999999999999999999999998764321
Q ss_pred ceeeeeecCCCCCCChhhhhc-----CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLAN-----LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.......|+..|+|||.+.. ...+.++|||||||++|||++|+.||......+...+ .. ......
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~---~~-~~~~~~----- 292 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASL---MC-AICMSQ----- 292 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHH---HH-HHhccC-----
Confidence 11233568999999998743 2345689999999999999999999973322111110 00 000000
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.. .........+.+++.+||+.||++||++.||++.
T Consensus 293 ~~-----~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 PP-----EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CC-----CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 1111223457788899999999999999999874
No 102
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.9e-35 Score=313.28 Aligned_cols=259 Identities=22% Similarity=0.343 Sum_probs=204.5
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||+|+. .+++.||||.+... ......+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 466788999999999999995 46889999987532 2334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++..... ....++...+..++.|+++||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 83 LADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998854322 23457889999999999999999998 8999999999999999999999999999887643
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. .......++..|+|||.+.+..++.++||||||+++|||++|+.||....... ..+. ....... .
T Consensus 159 ~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~----~~~~-~~~~~~~-----~ 225 (267)
T cd08228 159 KT---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----FSLC-QKIEQCD-----Y 225 (267)
T ss_pred hh---HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH----HHHH-HHHhcCC-----C
Confidence 21 11123458889999999998889999999999999999999999985432110 0111 1111100 0
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
+. .........+.+++.+||+.+|.+||++.+|++.|++++
T Consensus 226 ~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 226 PP----LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CC----CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 10 111123356778899999999999999999999998764
No 103
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.5e-35 Score=323.15 Aligned_cols=243 Identities=25% Similarity=0.311 Sum_probs=189.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHh---hcccccceeeeeeeeccCceeeEE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATI---SSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l---~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
|.+.+.||+|+||.||++... +++.||||+++.. ....+.+..|+.++ ++++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 356789999999999999864 5789999999732 22234566666554 567899999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|..++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 81 ~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 81 MEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred EcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 999999999988842 358999999999999999999998 89999999999999999999999999998753
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
.... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 152 ~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-------~~~~i~~~~~--- 218 (324)
T cd05589 152 MGFG---DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-------VFDSIVNDEV--- 218 (324)
T ss_pred CCCC---CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC---
Confidence 2211 12234568999999999999999999999999999999999999997543211 0111111110
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
. .+......+.+++.+|++.||.+||+ +.++++
T Consensus 219 ---~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 ---R-----YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---C-----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0 11111234678889999999999994 555544
No 104
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.7e-35 Score=315.49 Aligned_cols=266 Identities=26% Similarity=0.367 Sum_probs=203.4
Q ss_pred HhcccccccccccccceEEEEEECC-----------------CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLAN-----------------RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVR 558 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~ 558 (852)
...+.+.++||+|+||.||++...+ +..||+|.+... ....+++.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3467788999999999999988542 246899998743 234567899999999999999999
Q ss_pred eeeeeccCceeeEEEeecCCCCHHHHhhhcccC------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCc
Q 003059 559 LVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEG------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPEN 632 (852)
Q Consensus 559 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 632 (852)
+++++..++..++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence 999999999999999999999999999764421 12368999999999999999999998 899999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh--CCcccccccc
Q 003059 633 ILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS--GRRNFEVSQE 710 (852)
Q Consensus 633 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--G~~p~~~~~~ 710 (852)
|++++++.++|+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9999999999999999986543221 112223446778999999998899999999999999999998 6677754321
Q ss_pred ccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 711 TNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
. .........+........ . ..+......+.+++.+|++.+|.+||++.+|++.|++
T Consensus 240 ~---~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 Q---QVIENAGHFFRDDGRQIY----L---PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred H---HHHHHHHhcccccccccc----C---CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1 111111111110000000 0 1111122467889999999999999999999999863
No 105
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-35 Score=328.98 Aligned_cols=194 Identities=24% Similarity=0.314 Sum_probs=167.3
Q ss_pred HHhcccccccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
....|.+.++||+|+||.||++.. ..++.||+|... ...+.+|++++++++||||+++++++..+...++|+|+
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 345688889999999999999996 457889999754 23578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+. ++|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 165 ~~-~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 165 YK-TDLYCYLAAK-----RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred CC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 95 7888888543 347899999999999999999998 89999999999999999999999999999754321
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFE 706 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~ 706 (852)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||-
T Consensus 236 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 236 --NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred --cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 1112234579999999999999999999999999999999999998864
No 106
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.7e-35 Score=323.05 Aligned_cols=241 Identities=26% Similarity=0.292 Sum_probs=186.5
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHH-HhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVA-TISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++... +++.||+|++.... ....++..|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 56789999987322 22234444444 56788999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++... ..+....+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-- 150 (325)
T cd05602 81 GELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-- 150 (325)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--
Confidence 9999999643 246778888899999999999998 899999999999999999999999999997543211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ......... ..
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~i~~~~--------~~ 214 (325)
T cd05602 151 -GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-------MYDNILNKP--------LQ 214 (325)
T ss_pred -CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-------HHHHHHhCC--------cC
Confidence 12234569999999999999999999999999999999999999997433211 011111111 00
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
........+.+++.+|++.+|.+||++.+.+..
T Consensus 215 ---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 215 ---LKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred ---CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 011122356678888999999999998754433
No 107
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.6e-35 Score=315.52 Aligned_cols=268 Identities=24% Similarity=0.346 Sum_probs=201.7
Q ss_pred HHHhcccccccccccccceEEEEEECC---------------CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceee
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLAN---------------RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVR 558 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~ 558 (852)
+.+..+.+.++||+|+||.||++...+ ...||+|.+... ......|.+|++++.+++|+||++
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 345578888999999999999987532 235899998742 233467899999999999999999
Q ss_pred eeeeeccCceeeEEEeecCCCCHHHHhhhcccC-------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCC
Q 003059 559 LVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEG-------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPE 631 (852)
Q Consensus 559 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~ 631 (852)
+++++...+..++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++||||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChh
Confidence 999999999999999999999999999643211 11347889999999999999999998 89999999999
Q ss_pred ceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh--CCccccccc
Q 003059 632 NILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS--GRRNFEVSQ 709 (852)
Q Consensus 632 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--G~~p~~~~~ 709 (852)
||++++++.+||+|||+++....... ........++..|+|||.+.+..++.++||||||++++||++ |..||....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcc-eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 99999999999999999986543211 111222345678999999998899999999999999999998 566776433
Q ss_pred cccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 710 ETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 710 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
... ............. ...... .+......+.+++.+|++.+|++||++.+|++.|++
T Consensus 238 ~~~---~~~~~~~~~~~~~-~~~~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 DEQ---VIENTGEFFRNQG-RQIYLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hHH---HHHHHHHhhhhcc-ccccCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 211 1111111111000 000000 011112467889999999999999999999999863
No 108
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-35 Score=322.58 Aligned_cols=267 Identities=26% Similarity=0.399 Sum_probs=207.6
Q ss_pred HHHHhcccccccccccccceEEEEEECC--------CcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeee
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLAN--------RTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFS 563 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~ 563 (852)
++...++.+.+.||+|+||.||++...+ ...||+|.+... ....+++.+|++++.++ +|+||++++++|
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 5556678889999999999999997421 236899988743 23456789999999999 899999999999
Q ss_pred ccCceeeEEEeecCCCCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCc
Q 003059 564 SEGKHRLLVYEFMKNGSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPEN 632 (852)
Q Consensus 564 ~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 632 (852)
.+.+..++||||+++|+|.+++..... .....+++..++.++.|++.||+|||+ ++|+||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~N 164 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARN 164 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccce
Confidence 999999999999999999999975421 123468899999999999999999998 899999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccc
Q 003059 633 ILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQET 711 (852)
Q Consensus 633 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~ 711 (852)
||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 243 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243 (334)
T ss_pred EEEcCCCcEEECCcccceeccccccc-ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999865432111 11122334567999999999999999999999999999998 88888643221
Q ss_pred cchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCC
Q 003059 712 NRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIE 782 (852)
Q Consensus 712 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~ 782 (852)
. ........... ..+......+.+++.+|++.+|.+||++.++++.|+++....
T Consensus 244 ~-------~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 244 E-------LFKLLKEGHRM----------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred H-------HHHHHHcCCCC----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1 01111111100 111122345778899999999999999999999999887543
No 109
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=332.82 Aligned_cols=250 Identities=26% Similarity=0.427 Sum_probs=205.2
Q ss_pred cccccccccceEEEEEE-CC----CcEEEEEEecC--cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 504 KDKLGAGGFGAVYRGVL-AN----RTVVAVKQLEG--IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~-~~----~~~vavK~l~~--~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.++||.|+||+||||.+ .. +.+||+|++.. ..+...++.+|+.+|.+++||||++|+|+|.... ..||++||
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m 779 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM 779 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence 46899999999999985 33 35799999873 3445688999999999999999999999998876 88999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
+.|+|.+|+..+ +..+--+..+.|..|||+||.|||+ ++++||||.++||||..-..+||.|||+++.+.+++
T Consensus 780 P~G~LlDyvr~h----r~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 780 PLGCLLDYVREH----RDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred ccchHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999764 3458888899999999999999998 899999999999999999999999999999987654
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
.. .......-.+.|||-|.++...++.++|||||||++||++| |..|++....++..+ .++.+ ++
T Consensus 853 ~e-y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-------lle~g------eR 918 (1177)
T KOG1025|consen 853 KE-YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-------LLEKG------ER 918 (1177)
T ss_pred cc-ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-------HHhcc------cc
Confidence 32 33334455788999999999999999999999999999998 999998654332211 11111 11
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
| .-++-....+..++..||..|+..||+++++...+.+..
T Consensus 919 -L---sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 919 -L---SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred -C---CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 2 223344556777888999999999999999998887653
No 110
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.1e-35 Score=313.21 Aligned_cols=256 Identities=30% Similarity=0.468 Sum_probs=201.5
Q ss_pred hcccccccccccccceEEEEEEC----CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA----NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
..+.+.+.||+|+||.||+|... .+..+|+|.++... ...+.|.+|+.++.+++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 45677889999999999999863 23479999987432 3346789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++... ...+++.+++.++.|++.||+|||+ .+++||||||+|||++.++.++|+|||+++.+
T Consensus 84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 84 TEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999643 2358899999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
..............++..|+|||.+.+..++.++||||||+++||+++ |+.||......+ . .....++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~----~~~~~~~~--- 226 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---V----IKAIEEGY--- 226 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---H----HHHHhCCC---
Confidence 543221111122234568999999998899999999999999999886 999996443211 0 11111110
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
. . +.+......+.+++.+|++.+|.+||+|.++++.|+++
T Consensus 227 --~--~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 --R--L---PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --c--C---CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 0 11111234567888999999999999999999999864
No 111
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3e-35 Score=329.54 Aligned_cols=201 Identities=23% Similarity=0.293 Sum_probs=170.2
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||++.. .+++.||||++... ....+.+++|++++.+++||||+++++++.+....|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 356678999999999999985 46889999998632 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 82 FLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999643 347888899999999999999998 8999999999999999999999999999964321
Q ss_pred CCCc------------c--------------------------------eeeeeecCCCCCCChhhhhcCCCCCCccchh
Q 003059 655 KDHR------------H--------------------------------RTLTSVRGTRGYLAPEWLANLPITSKSDVYS 690 (852)
Q Consensus 655 ~~~~------------~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s 690 (852)
.... . .......||+.|+|||.+.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 0 0001245899999999999999999999999
Q ss_pred hhHHHHHHHhCCcccccc
Q 003059 691 YGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 691 ~Gvvl~elltG~~p~~~~ 708 (852)
|||++|||++|+.||...
T Consensus 234 lGvil~elltG~~Pf~~~ 251 (377)
T cd05629 234 LGAIMFECLIGWPPFCSE 251 (377)
T ss_pred cchhhhhhhcCCCCCCCC
Confidence 999999999999999654
No 112
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.2e-35 Score=314.34 Aligned_cols=260 Identities=23% Similarity=0.309 Sum_probs=191.6
Q ss_pred cccccccccccccceEEEEEEC--CCcEEEEEEecCcc---cchHHHHHHHHHhhcc---cccceeeeeeeec-----cC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA--NRTVVAVKQLEGIE---QGEKQFRMEVATISST---HHLNLVRLVGFSS-----EG 566 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l---~h~niv~l~g~~~-----~~ 566 (852)
+|.+.++||+|+||.||+|... +++.||+|++.... .....+.+|+++++.+ +||||++++++|. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 4677889999999999999863 46889999887322 2234566777777665 6999999999885 34
Q ss_pred ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeec
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDF 646 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 646 (852)
...++||||++ ++|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 56899999996 69999986432 3358899999999999999999998 89999999999999999999999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
|+++..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+.. .. .......
T Consensus 155 g~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~--~~-i~~~~~~ 227 (290)
T cd07862 155 GLARIYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL--GK-ILDVIGL 227 (290)
T ss_pred cceEeccCC----cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH--HH-HHHHhCC
Confidence 999865432 1223456899999999999889999999999999999999999999765332111 00 0000000
Q ss_pred ---CCcc---cccccccC-CCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 ---GNVK---GIVDKSLA-GEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ---~~~~---~~~d~~l~-~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.... .+....+. ....+.+ ....+.+++.+|++.||++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000 00000000 0011111 1234568999999999999999999874
No 113
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-35 Score=287.76 Aligned_cols=245 Identities=27% Similarity=0.335 Sum_probs=202.7
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.++.+.||+|-||.||.|.. .++-.||+|++.+. .+.+.++.+|+++-..|+||||++++++|.+....||++||
T Consensus 24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy 103 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY 103 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence 45678899999999999995 45778999998743 34457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
.++|+|...|.... ...++......++.|+|.||.|+|. +++|||||||+|+|++..+..||+|||-+....
T Consensus 104 a~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 104 APRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred cCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999997433 4457888888999999999999999 899999999999999999999999999887543
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
........||..|++||...+...+...|+|++|++.||++.|.+||+..... ..+..+.+- ++.+
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-------etYkrI~k~---~~~~- 241 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-------ETYKRIRKV---DLKF- 241 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-------HHHHHHHHc---cccC-
Confidence 22345678999999999999999999999999999999999999999855421 122222221 1111
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+..-...+.+++.+|+..+|.+|.+..||++.
T Consensus 242 -------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 242 -------PSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -------CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 12223456788999999999999999998864
No 114
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.5e-35 Score=314.67 Aligned_cols=257 Identities=31% Similarity=0.421 Sum_probs=199.1
Q ss_pred hcccccccccccccceEEEEEECC------CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLAN------RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
..+.+.+.||+|+||.||+|.+.+ +..|++|.+... ......|..|+.++++++|+||+++++++.+....+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 345667899999999999999753 567899988633 233467899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccC--CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC---ceEEee
Q 003059 571 LVYEFMKNGSLDNFLFANEEG--SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY---NAKVSD 645 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~D 645 (852)
+||||+++++|.+++...... ....+++..++.++.||+.||+|||+ ++++||||||+|||++.++ .+||+|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEecc
Confidence 999999999999999754321 22368999999999999999999998 8899999999999998755 599999
Q ss_pred cccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHH
Q 003059 646 FGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEF 724 (852)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~ 724 (852)
||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |+.||....... . ....
T Consensus 163 fg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~----~~~~ 234 (277)
T cd05036 163 FGMARDIYRASYY-RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---V----MEFV 234 (277)
T ss_pred CccccccCCccce-ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHH
Confidence 9999876332111 11112223568999999999999999999999999999997 999997543211 1 0111
Q ss_pred hhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 725 EKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
...... ..+......+.+++.+|++.+|++||++.+|++.|+
T Consensus 235 ~~~~~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGGGRL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcCCcC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111000 111112245778899999999999999999999885
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.4e-35 Score=315.24 Aligned_cols=250 Identities=25% Similarity=0.306 Sum_probs=197.4
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
+|+..++||+|+||.||++... +++.||+|.+.... .....+.+|+.++++++|+||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3566788999999999999864 58899999987322 223557889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 81 LMNGGDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred ccCCCcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 999999999886432 2458999999999999999999998 8999999999999999999999999999986532
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. ......|+..|+|||.+.+..++.++||||||+++|||++|+.||......... ........
T Consensus 155 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~--------- 218 (285)
T cd05605 155 GE----TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVK--------- 218 (285)
T ss_pred CC----ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhh---------
Confidence 21 122346899999999999889999999999999999999999999754321110 00000010
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
.... ..+......+.+++..|++.||.+|| +++++++
T Consensus 219 ~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 219 EDQE--EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hccc--ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 0000 11112234567888999999999999 7778765
No 116
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.4e-35 Score=320.53 Aligned_cols=247 Identities=20% Similarity=0.308 Sum_probs=192.8
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++... +++.||+|+++.. ....+.+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999864 5789999999742 22335678899999888 799999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-- 150 (329)
T cd05588 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-- 150 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCC--
Confidence 9999988543 358999999999999999999998 899999999999999999999999999987532211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccccccc--chhhHHHHHHHHhhCCcccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETN--RKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||+...... ......+...........
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 223 (329)
T cd05588 151 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR------ 223 (329)
T ss_pred -CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC------
Confidence 12234568999999999999999999999999999999999999997432211 111112222222221110
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCC------HHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM------MGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt------~~ev~~ 773 (852)
+ +......+.+++.+|++.||.+||+ +.++++
T Consensus 224 ~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 I-----PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred C-----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1 1111235677888999999999997 556653
No 117
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.4e-35 Score=313.70 Aligned_cols=246 Identities=24% Similarity=0.334 Sum_probs=192.6
Q ss_pred ccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 507 LGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
||+|+||.||++... +++.||+|.+.... ...+.+..|++++++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999864 57899999986322 2235678899999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
..++..... ....+++..++.++.||+.||+|||+ ++|+||||||+||++++++.+||+|||++..+..... .
T Consensus 81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---~ 153 (280)
T cd05608 81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS---K 153 (280)
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc---c
Confidence 988854322 24468999999999999999999998 8999999999999999999999999999976543221 1
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||......... ..... .+..... .
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~-------~~~~~----~~~~~~~---~ 219 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-------KELKQ----RILNDSV---T 219 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH-------HHHHH----hhcccCC---C
Confidence 23356899999999999999999999999999999999999999754321110 00000 0111111 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
.+......+.+++.+|++.||++|| +++++++
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 1112234567888899999999999 5666664
No 118
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.4e-35 Score=326.24 Aligned_cols=201 Identities=23% Similarity=0.312 Sum_probs=170.3
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.+.++||+|+||.||+|.. .+++.||+|++... ......+.+|++++.+++|+||+++++++.+.+..++||||
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~ 82 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence 55678999999999999986 45789999999742 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||||+.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 83 IPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999643 347888889999999999999998 89999999999999999999999999998643210
Q ss_pred CCc--------------------------------------------ceeeeeecCCCCCCChhhhhcCCCCCCccchhh
Q 003059 656 DHR--------------------------------------------HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSY 691 (852)
Q Consensus 656 ~~~--------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~ 691 (852)
... ........||+.|+|||.+.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 000 000123469999999999999899999999999
Q ss_pred hHHHHHHHhCCccccccc
Q 003059 692 GMVLLEIVSGRRNFEVSQ 709 (852)
Q Consensus 692 Gvvl~elltG~~p~~~~~ 709 (852)
||++|||++|+.||....
T Consensus 235 G~il~elltG~~Pf~~~~ 252 (381)
T cd05626 235 GVILFEMLVGQPPFLAPT 252 (381)
T ss_pred hhHHHHHHhCCCCCcCCC
Confidence 999999999999997543
No 119
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.7e-35 Score=319.80 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=194.2
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
..|.+.++||+|+||.||+|... +++.||+|++.... .....+.+|+.++++++||||+++++++.+....++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 35677889999999999999975 57899999987332 2335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
++ ++|.+++... ...++...+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 85 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 85 VH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 95 6888887543 2347888899999999999999998 89999999999999999999999999998754321
Q ss_pred CCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC---c--
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN---V-- 729 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~-- 729 (852)
. .......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||........ .+ ........... .
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 157 S---HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD-QL-ERIFLVLGTPNEDTWPG 231 (303)
T ss_pred C---ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH-HH-HHHHHHhCCCChhhccc
Confidence 1 12233557899999999865 4578899999999999999999999975432111 00 00000000000 0
Q ss_pred ----ccccccccC-CCCCCHH-------HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 730 ----KGIVDKSLA-GEDVDIE-------QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 730 ----~~~~d~~l~-~~~~~~~-------~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
......... ..+.... ....+.+++..|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000 0001111 1134668888999999999999999985
No 120
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.9e-35 Score=319.51 Aligned_cols=260 Identities=28% Similarity=0.439 Sum_probs=200.7
Q ss_pred hcccccccccccccceEEEEEEC-CCc--EEEEEEecC--cccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRT--VVAVKQLEG--IEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~l~~--~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 572 (852)
..+.+.+.||+|+||.||+|... ++. .+++|.+.. ......++.+|++++.++ +|+||+++++++.+++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 34567789999999999999964 343 467777763 233456788999999999 899999999999999999999
Q ss_pred EeecCCCCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCce
Q 003059 573 YEFMKNGSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNA 641 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 641 (852)
|||+++++|.+++..... .....+++..++.++.|++.||+|||+ ++++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 999999999999975432 112368899999999999999999998 899999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHH
Q 003059 642 KVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWA 720 (852)
Q Consensus 642 kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~ 720 (852)
||+|||+++..... .......++..|+|||.+.+..++.++||||||+++|||+| |..||....... .
T Consensus 164 kl~dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~ 232 (303)
T cd05088 164 KIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------L 232 (303)
T ss_pred EeCccccCcccchh----hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-------H
Confidence 99999998643211 01111234667999999988889999999999999999998 999996432211 0
Q ss_pred HHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCC
Q 003059 721 YEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIE 782 (852)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~ 782 (852)
........ .. ..+......+.+++.+|++.+|++||++.++++.|+.+.+..
T Consensus 233 ~~~~~~~~-------~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 233 YEKLPQGY-------RL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred HHHHhcCC-------cC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111110 00 001111235678899999999999999999999998775443
No 121
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.5e-35 Score=310.64 Aligned_cols=255 Identities=25% Similarity=0.327 Sum_probs=190.8
Q ss_pred ccccccccceEEEEEECC---CcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLAN---RTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.||+|+||.||+|...+ +..+++|.++... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 369999999999998643 3579999887433 33457889999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++..........+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++....... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-~ 156 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-Y 156 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcce-e
Confidence 99999975443233456788888999999999999998 8999999999999999999999999999875432211 1
Q ss_pred eeeeeecCCCCCCChhhhhcC-------CCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 660 RTLTSVRGTRGYLAPEWLANL-------PITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
.......++..|+|||++.+. .++.++||||||+++|||++ |+.||......... . .........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~---~----~~~~~~~~~ 229 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL---T----YTVREQQLK 229 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH---H----HHhhcccCC
Confidence 111234567889999998642 35789999999999999996 99999654322110 0 001111111
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
..++.+.. .....+.+++..|+ .+|++||++.+|++.|+
T Consensus 230 ~~~~~~~~-----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKL-----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCC-----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11222111 11123455667788 58999999999998875
No 122
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.5e-35 Score=313.59 Aligned_cols=261 Identities=26% Similarity=0.395 Sum_probs=205.1
Q ss_pred HHHhcccccccccccccceEEEEEECC------CcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCc
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLAN------RTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGK 567 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~ 567 (852)
|....+.+.+.||+|+||.||+|...+ +..|++|.+.... .....+.+|+.++..++|+||+++++++....
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 445567778899999999999998642 3689999987432 33457889999999999999999999999999
Q ss_pred eeeEEEeecCCCCHHHHhhhcccC-----CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceE
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEG-----SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAK 642 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 642 (852)
..++||||+++++|.+++...... ....+++..++.++.|++.||.|||+ .+++||||||+|||++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEE
Confidence 999999999999999999654321 12357899999999999999999998 8999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHH
Q 003059 643 VSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 643 l~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 721 (852)
|+|||+++.+...... .......++..|+|||.+....++.++||||||+++|||++ |+.||....... + .
T Consensus 160 l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~----~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---V----L 231 (277)
T ss_pred ECCcccchhhccCccc-ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---H----H
Confidence 9999999866432211 11223346788999999998899999999999999999998 999986433211 1 1
Q ss_pred HHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
.....+.... .+......+.+++.+|++.+|++||++.++++.|++
T Consensus 232 ~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 232 KFVIDGGHLD----------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHhcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1111111111 111123467789999999999999999999999863
No 123
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.2e-34 Score=322.76 Aligned_cols=200 Identities=25% Similarity=0.336 Sum_probs=171.5
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.+.++||+|+||.||++... +++.||+|++... ......+..|+.++.+++|+||+++++.+.+....++||||
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~ 82 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEF 82 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcC
Confidence 556789999999999999864 5789999999742 22335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 83 LPGGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999643 358899999999999999999998 89999999999999999999999999999765321
Q ss_pred CCc--------------------------------ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCc
Q 003059 656 DHR--------------------------------HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRR 703 (852)
Q Consensus 656 ~~~--------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~ 703 (852)
... ........||+.|+|||.+.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 100 000123469999999999999999999999999999999999999
Q ss_pred ccccc
Q 003059 704 NFEVS 708 (852)
Q Consensus 704 p~~~~ 708 (852)
||...
T Consensus 235 Pf~~~ 239 (363)
T cd05628 235 PFCSE 239 (363)
T ss_pred CCCCC
Confidence 99754
No 124
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4e-35 Score=321.48 Aligned_cols=236 Identities=26% Similarity=0.309 Sum_probs=185.8
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHH-HhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVA-TISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||+|... +++.||+|++.... ....++..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999974 68899999987321 22334555554 56789999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--- 149 (323)
T cd05575 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--- 149 (323)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---
Confidence 9999998543 358888999999999999999998 89999999999999999999999999998754221
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ......... ..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-------~~~~i~~~~--------~~ 214 (323)
T cd05575 150 SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-------MYDNILNKP--------LR 214 (323)
T ss_pred CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-------HHHHHHcCC--------CC
Confidence 112234568999999999999999999999999999999999999997542211 111111111 10
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
........+.+++.+|++.||.+||++.
T Consensus 215 ---~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 ---LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ---CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0111134567888899999999999985
No 125
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.1e-35 Score=307.59 Aligned_cols=246 Identities=28% Similarity=0.398 Sum_probs=196.3
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHH
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLD 582 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 582 (852)
+.||+|+||.||+|...+++.+|+|.+.... .....|.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 4699999999999998888999999987432 23456889999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceee
Q 003059 583 NFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTL 662 (852)
Q Consensus 583 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 662 (852)
+++... ...+++..++.++.|++.+|.|||+ ++++||||||+||++++++.+||+|||++........ ...
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~ 151 (250)
T cd05085 81 SFLRKK----KDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY--SSS 151 (250)
T ss_pred HHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceecccccc--ccC
Confidence 998543 2347899999999999999999998 8999999999999999999999999999875432111 111
Q ss_pred eeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 663 TSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
....++..|+|||++.+..++.++||||||+++|||++ |..||....... .......+... .
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-------~~~~~~~~~~~----------~ 214 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-------AREQVEKGYRM----------S 214 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcCCCC----------C
Confidence 12234667999999998899999999999999999998 999996432211 11111111100 0
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
.+......+.+++.+|++.+|++||++.++++.|.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11112346778999999999999999999999875
No 126
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.6e-35 Score=311.54 Aligned_cols=255 Identities=25% Similarity=0.363 Sum_probs=188.5
Q ss_pred ccccccccceEEEEEECC---CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLAN---RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
++||+|+||.||+|...+ ...+++|.+... ......|.+|+++++.++|+||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999997543 356888887633 233457889999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++...........++...+.++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~- 156 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY- 156 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhe-
Confidence 99999976543333446788889999999999999998 89999999999999999999999999998754322111
Q ss_pred eeeeeecCCCCCCChhhhhc-------CCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 660 RTLTSVRGTRGYLAPEWLAN-------LPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-------~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
.......++..|+|||++.. ..++.++||||||+++|||++ |..||......+ ............
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-------~~~~~~~~~~~~ 229 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-------VLKQVVREQDIK 229 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-------HHHHHhhccCcc
Confidence 11122345678999998753 356789999999999999999 788886442211 011111111111
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
+..+.+. ......+.+++..|+ .||++||++++|++.|.
T Consensus 230 ~~~~~~~-----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQLD-----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCccc-----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1122111 112233445566677 59999999999999873
No 127
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.1e-35 Score=311.71 Aligned_cols=256 Identities=28% Similarity=0.413 Sum_probs=197.0
Q ss_pred cccccccccccceEEEEEECCC---cEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC------cee
Q 003059 502 GFKDKLGAGGFGAVYRGVLANR---TVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG------KHR 569 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~~~---~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~~~ 569 (852)
.+.++||+|+||.||+|.+.+. ..||+|.++.. ....+.+..|++++++++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 3568899999999999997543 25899988743 23356788999999999999999999987532 256
Q ss_pred eEEEeecCCCCHHHHhhhccc-CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEE-GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence 899999999999998854321 223458999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKG 727 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (852)
++.+..... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... . .......+
T Consensus 159 ~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~----~~~~~~~~ 230 (272)
T cd05075 159 SKKIYNGDY-YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---E----IYDYLRQG 230 (272)
T ss_pred ccccCcccc-eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---H----HHHHHHcC
Confidence 987643221 111122345678999999999999999999999999999999 88998643221 1 11112221
Q ss_pred CcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 728 NVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 728 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
... ..+......+.+++.+|++.+|++||++.+|++.|+++
T Consensus 231 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 110 01111233567889999999999999999999999864
No 128
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.8e-35 Score=316.56 Aligned_cols=263 Identities=24% Similarity=0.332 Sum_probs=201.2
Q ss_pred hcccccccccccccceEEEEEE-----CCCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccC--cee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-----ANRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHR 569 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~ 569 (852)
..+.+.++||+|+||.||++.+ .++..||+|.+... ......+.+|++++++++|+||+++++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4556678899999999999974 34778999998733 23346789999999999999999999998775 578
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred EEEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccc
Confidence 9999999999999998543 2358999999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccc--------cchhhHHHHH
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQET--------NRKKFSLWAY 721 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~--------~~~~l~~~~~ 721 (852)
+.+..............++..|+|||.+.+..++.++||||||+++|||++++.|....... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 87654322212223345677899999999889999999999999999999988765322110 0000000011
Q ss_pred HHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.....+.. . +........+.+++.+|++.+|++||++.++++.|+++
T Consensus 237 ~~~~~~~~-------~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGKR-------L---PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCcc-------C---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11111110 0 11112235688899999999999999999999999865
No 129
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=320.65 Aligned_cols=243 Identities=27% Similarity=0.400 Sum_probs=196.3
Q ss_pred cccccccceEEEEEECC-CcEEEEEEec-CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHHH
Q 003059 506 KLGAGGFGAVYRGVLAN-RTVVAVKQLE-GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLDN 583 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~~-~~~vavK~l~-~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 583 (852)
+||+|.||+||-|++.+ ...+|||.+. ......+-+..|+.+-++++|.|||+.+|.|.++++.-|.||.+|||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 59999999999999654 6679999987 444445667889999999999999999999999999999999999999999
Q ss_pred HhhhcccCCcccc--chhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC-CCCceEEeecccccccCCCCCcce
Q 003059 584 FLFANEEGSGKLL--NWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD-ENYNAKVSDFGLAKLINPKDHRHR 660 (852)
Q Consensus 584 ~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~ 660 (852)
+|...-. ++ .+.++--+.+||++||.|||+ ..|||||||-.||||+ -.|.+||+|||-++.+..- ..
T Consensus 662 LLrskWG----PlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi---nP 731 (1226)
T KOG4279|consen 662 LLRSKWG----PLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI---NP 731 (1226)
T ss_pred HHHhccC----CCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccC---Cc
Confidence 9965432 34 566677788999999999999 8899999999999996 5799999999999876532 23
Q ss_pred eeeeecCCCCCCChhhhhcC--CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 661 TLTSVRGTRGYLAPEWLANL--PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
......||.-|||||++..+ .|+..+|||||||++.||.||++||-.........+ . ..+...
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF--------k----VGmyKv--- 796 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF--------K----VGMYKV--- 796 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh--------h----hcceec---
Confidence 44567799999999999765 488999999999999999999999964432211110 0 011111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+.+.+-..++..++++|+.+||.+||++.++++
T Consensus 797 HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 797 HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 12445566677889999999999999999999885
No 130
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.6e-35 Score=314.14 Aligned_cols=263 Identities=26% Similarity=0.403 Sum_probs=206.2
Q ss_pred HHhcccccccccccccceEEEEEECC-----CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeecc-Cce
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLAN-----RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSE-GKH 568 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~-~~~ 568 (852)
...++.+.+.||+|+||.||+|...+ +..|++|++... ......+.+|+.++++++|+||+++++++.+ +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45567788999999999999999765 688999998743 2335668899999999999999999998776 568
Q ss_pred eeEEEeecCCCCHHHHhhhcccC---CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEee
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEG---SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSD 645 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 645 (852)
.++++||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999999654221 12568999999999999999999998 8999999999999999999999999
Q ss_pred cccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHH
Q 003059 646 FGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEF 724 (852)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~ 724 (852)
||+++.+...+.. .......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .+. ...
T Consensus 161 ~g~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~----~~~ 232 (280)
T cd05043 161 NALSRDLFPMDYH-CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---EMA----AYL 232 (280)
T ss_pred CCCcccccCCceE-EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---HHH----HHH
Confidence 9999876443211 11122346778999999998899999999999999999999 99999643221 111 111
Q ss_pred hhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 725 EKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
..+. .+. ........+.+++.+|++.+|++||++.+|++.|+.+.+
T Consensus 233 ~~~~-------~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 KDGY-------RLA---QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HcCC-------CCC---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1110 000 011112356789999999999999999999999987653
No 131
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.8e-35 Score=310.45 Aligned_cols=256 Identities=29% Similarity=0.457 Sum_probs=199.6
Q ss_pred cccccccccccceEEEEEECC----CcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCce------
Q 003059 502 GFKDKLGAGGFGAVYRGVLAN----RTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKH------ 568 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~------ 568 (852)
.+.+.||+|+||.||+|.+.. +..||+|+++... .....+.+|++.++.++|+||+++++++.+...
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 467889999999999998642 3679999987432 234578999999999999999999998876554
Q ss_pred eeEEEeecCCCCHHHHhhhcccC-CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEG-SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
.++|+||+++++|..++...... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCcc
Confidence 79999999999999998654321 23468999999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhh
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
+++.+...... ........+..|+|||.+.+..++.++||||||+++|||++ |..||...... .+ ......
T Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~----~~~~~~ 230 (273)
T cd05035 159 LSKKIYSGDYY-RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EI----YDYLRH 230 (273)
T ss_pred ceeeccccccc-cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHHc
Confidence 99876432211 11112335678999999998899999999999999999999 88998643221 11 111111
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
+... ..+......+.+++.+|++.||.+||++.+|++.|+++
T Consensus 231 ~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GNRL----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCC----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111 11112334678889999999999999999999999875
No 132
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.3e-35 Score=307.92 Aligned_cols=249 Identities=26% Similarity=0.385 Sum_probs=197.6
Q ss_pred ccccccccceEEEEEECC--C--cEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLAN--R--TVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
++||+|++|.||+|.+.+ + ..||+|.+.... ...+.+..|+.++++++|+||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 469999999999998643 2 368999998433 345689999999999999999999999988 899999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++..... ..+++..++.++.|+++||+|||+ ++++|+||||+||+++.++.+||+|||+++.+......
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 999999965431 468999999999999999999998 89999999999999999999999999999876543222
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ . ...... .. ...
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~----~~~~~~-~~-----~~~ 220 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---I----LKKIDK-EG-----ERL 220 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---H----HHHHHh-cC-----CcC
Confidence 112223457789999999999999999999999999999999 999996432211 0 001110 00 000
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
..+......+.+++.+|++.+|++||++.+|++.|.
T Consensus 221 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ---ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011112345778899999999999999999999885
No 133
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.3e-35 Score=321.44 Aligned_cols=242 Identities=24% Similarity=0.269 Sum_probs=192.2
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.||+|+||.||++.. .+++.||+|.+... .....++..|++++..++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 46889999998732 223456788999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|..++... ..+++..+..++.||+.||+|||+. .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 150 (325)
T cd05594 81 ELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--- 150 (325)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---
Confidence 999988543 3588999999999999999999962 589999999999999999999999999987543211
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAG 739 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (852)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ........ ..+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~-------~~~i~~~~------~~~-- 215 (325)
T cd05594 151 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------FELILMEE------IRF-- 215 (325)
T ss_pred cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH-------HHHHhcCC------CCC--
Confidence 122345699999999999999999999999999999999999999965432110 01111000 001
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 003059 740 EDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQM 774 (852)
Q Consensus 740 ~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~~ 774 (852)
+......+.+++.+|++.||++|+ ++.++++.
T Consensus 216 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 ---PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 111123466788899999999996 88888753
No 134
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-35 Score=319.62 Aligned_cols=266 Identities=27% Similarity=0.395 Sum_probs=206.1
Q ss_pred HHHHhcccccccccccccceEEEEEEC--------CCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeee
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLA--------NRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFS 563 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~ 563 (852)
++....|.+.++||+|+||.||++... ....+|+|.+... .....++..|++++.++ +|+||+++++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 445567888999999999999999752 2346999998743 23345788899999999 799999999999
Q ss_pred ccCceeeEEEeecCCCCHHHHhhhcccC-----------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCc
Q 003059 564 SEGKHRLLVYEFMKNGSLDNFLFANEEG-----------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPEN 632 (852)
Q Consensus 564 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 632 (852)
.+.+..++||||+++++|.+++...... ....+++..+++++.|++.||+|||+ .+++||||||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~N 170 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 170 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHh
Confidence 9999999999999999999999754321 12358999999999999999999998 899999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccc
Q 003059 633 ILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQET 711 (852)
Q Consensus 633 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~ 711 (852)
||++.++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~ 249 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchh-hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 99999999999999998765422111 11112234568999999999899999999999999999998 88888643221
Q ss_pred cchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 712 NRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 712 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
. ........... ..+......+.+++.+|++.+|.+||++.+|++.|+++...
T Consensus 250 ~-------~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 250 E-------LFKLLKEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred H-------HHHHHHcCCCC----------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1 11111111100 11112234666788999999999999999999999987643
No 135
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.4e-35 Score=317.23 Aligned_cols=261 Identities=28% Similarity=0.417 Sum_probs=201.4
Q ss_pred cccccccccccccceEEEEEECC-C--cEEEEEEecC--cccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-R--TVVAVKQLEG--IEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~--~~vavK~l~~--~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~ 573 (852)
.+.+.+.||+|+||.||+|...+ + ..+++|.++. .....+.|.+|++++.++ +||||+++++++.+.+..++|+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 82 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence 45677899999999999998754 3 3478888873 233456789999999999 7999999999999999999999
Q ss_pred eecCCCCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceE
Q 003059 574 EFMKNGSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAK 642 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 642 (852)
||+++++|.+++..... .....+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+|
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeEE
Confidence 99999999999965321 112358899999999999999999998 8999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHH
Q 003059 643 VSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 643 l~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 721 (852)
|+|||++...... ........+..|+|||.+.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 160 l~dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-------~~ 228 (297)
T cd05089 160 IADFGLSRGEEVY----VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-------LY 228 (297)
T ss_pred ECCcCCCccccce----eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------HH
Confidence 9999998643210 01111223567999999998899999999999999999997 999996443211 11
Q ss_pred HHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCCCC
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIEKP 784 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~~~ 784 (852)
.....+. .. ..+......+.+++.+|++.+|.+||++.+|++.|+.+.....+
T Consensus 229 ~~~~~~~-----~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 229 EKLPQGY-----RM-----EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HHHhcCC-----CC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1111110 00 01111223567889999999999999999999999887765433
No 136
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.8e-35 Score=328.03 Aligned_cols=252 Identities=25% Similarity=0.328 Sum_probs=199.2
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||++... +++.||+|++... ......+..|++++..++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 4667889999999999999965 5889999998732 2344678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 82 YMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 99999999999654 358899999999999999999999 8999999999999999999999999999986643
Q ss_pred CC--------------------------CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 655 KD--------------------------HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 655 ~~--------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
.. ..........||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 22 0001223456899999999999999999999999999999999999999754
Q ss_pred ccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 003059 709 QETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-MGKVVQM 774 (852)
Q Consensus 709 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-~~ev~~~ 774 (852)
.... ....+... ..... +. ........+.+++.+|++ +|.+||+ +.++++.
T Consensus 234 ~~~~-------~~~~i~~~-~~~~~---~p---~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQE-------TYNKIINW-KESLR---FP---PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHHH-------HHHHHhcc-CCccc---CC---CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 3211 11111110 00000 00 000123456677788997 9999999 9999864
No 137
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4e-35 Score=321.12 Aligned_cols=240 Identities=24% Similarity=0.325 Sum_probs=190.5
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
++||+|+||.||+|+.. +++.||+|++... ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 4789999998742 23345677888888866 799999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|..++... ..+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-- 150 (321)
T cd05591 81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-- 150 (321)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC--
Confidence 9999988543 348889999999999999999998 899999999999999999999999999987543211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||....... .......... .
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-------~~~~i~~~~~---~----- 214 (321)
T cd05591 151 -VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-------LFESILHDDV---L----- 214 (321)
T ss_pred -ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC---C-----
Confidence 12234568999999999999999999999999999999999999997543211 1111111110 0
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCC-------CHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRP-------MMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RP-------t~~ev~~ 773 (852)
.+......+.+++..|++.||++|| ++.++++
T Consensus 215 ---~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 215 ---YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ---CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 0111123567788899999999999 6777664
No 138
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.5e-34 Score=315.82 Aligned_cols=239 Identities=22% Similarity=0.314 Sum_probs=187.2
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhc-ccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISS-THHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~-l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||+|... +++.||+|.++.. ....+.+..|..++.. .+||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 4778999998742 2233455667777664 4899999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|..++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-- 150 (316)
T cd05592 81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-- 150 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--
Confidence 9999988543 248888999999999999999999 899999999999999999999999999997643221
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+... .+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-------~~~~i~~~------~~--- 213 (316)
T cd05592 151 -GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-------LFDSILND------RP--- 213 (316)
T ss_pred -CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcC------CC---
Confidence 22234568999999999999999999999999999999999999997543211 11111110 00
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHH-HHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG-KVV 772 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~-ev~ 772 (852)
..+......+.+++.+|++.+|.+||++. +++
T Consensus 214 --~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 214 --HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred --CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 01111223456788899999999999975 443
No 139
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.9e-35 Score=308.34 Aligned_cols=251 Identities=26% Similarity=0.456 Sum_probs=202.1
Q ss_pred cccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
.+.+.+.||+|+||.||++.+.+++.+++|.+........+|.+|++++++++|||++++++++......++||||++++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHG 84 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCC
Confidence 46677899999999999999877788999998866666678999999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++... ...++++.+..++.|++.+|+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 155 (256)
T cd05112 85 CLSDYLRAQ----RGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-- 155 (256)
T ss_pred cHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcc--
Confidence 999998643 2347899999999999999999998 8899999999999999999999999999876533211
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......++.+|+|||.+.+..++.++||||||+++|||++ |+.||....... ......++. ....+.
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~--~~~~~~-- 224 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-------VVETINAGF--RLYKPR-- 224 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-------HHHHHhCCC--CCCCCC--
Confidence 11112234678999999998899999999999999999998 999986433211 011111110 001111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
.....+.+++.+|++.+|++||++.+|++.|.
T Consensus 225 ------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 ------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 11246788999999999999999999999873
No 140
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.7e-34 Score=307.10 Aligned_cols=258 Identities=21% Similarity=0.359 Sum_probs=206.2
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.+.||+|+||.||+|... +++.|++|.++.. ....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 5677889999999999999976 7889999988621 2235678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++..... ....+++..++.++.+++.||+|||+ .+|+||||||+||+++.++.++|+|||+++.+..
T Consensus 83 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 83 LADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred cCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999865322 24458899999999999999999998 8999999999999999999999999999886543
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... .... ......+...
T Consensus 159 ~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~-~~~~~~~~~~---- 226 (267)
T cd08224 159 KTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSL-CKKIEKCDYP---- 226 (267)
T ss_pred CCc---ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHH-HhhhhcCCCC----
Confidence 211 122345888999999999889999999999999999999999998643211 1000 1111111100
Q ss_pred cccCCCCCCH-HHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 735 KSLAGEDVDI-EQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 735 ~~l~~~~~~~-~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
+.+. .....+.+++.+|++.+|.+||++.+|+++|+++.
T Consensus 227 ------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 227 ------PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ------CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1111 22345678899999999999999999999998764
No 141
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.8e-35 Score=313.45 Aligned_cols=258 Identities=27% Similarity=0.419 Sum_probs=200.9
Q ss_pred hcccccccccccccceEEEEEEC------CCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLL 571 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 571 (852)
..+.+.++||+|+||.||++... ++..+++|.+.. .......|.+|++++++++|+||+++++++.++...++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45567789999999999999742 356789998873 33445679999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhhhccc----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCce
Q 003059 572 VYEFMKNGSLDNFLFANEE----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNA 641 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 641 (852)
||||+++++|.+++..... .....+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence 9999999999999965421 112358899999999999999999998 899999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHH
Q 003059 642 KVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWA 720 (852)
Q Consensus 642 kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~ 720 (852)
||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 162 kL~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------- 233 (280)
T cd05092 162 KIGDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA------- 233 (280)
T ss_pred EECCCCceeEcCCCce-eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-------
Confidence 9999999976543211 111122335678999999999999999999999999999998 9999864332111
Q ss_pred HHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 721 YEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
......+... ..+......+.+++.+||+.||.+||++.+|++.|++
T Consensus 234 ~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IECITQGREL----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHcCccC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0111111100 0001112346788899999999999999999999863
No 142
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.1e-35 Score=314.18 Aligned_cols=271 Identities=22% Similarity=0.343 Sum_probs=204.0
Q ss_pred hcccccccccccccceEEEEEEC-----CCcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeecc--Ccee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-----NRTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSE--GKHR 569 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~--~~~~ 569 (852)
..+.+.++||+|+||.||++.+. .+..+|||.+..... ..++|.+|++++++++|+||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35567789999999999999854 367899999985544 36789999999999999999999999877 5688
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 99999999999999996442 258999999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCc
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNV 729 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (852)
.................++..|+|||.+.+..++.++||||||++++||++|+.|+............. .........+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 235 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-AQGQMIVTRL 235 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-ccccccHHHH
Confidence 876532221111112345667999999998899999999999999999999999986432211000000 0000000000
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.+.+...... ..+......+.+++.+|++.+|++||++.||+++|+.+
T Consensus 236 ~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERL-PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcC-CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0011111100 11111225677899999999999999999999999876
No 143
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.1e-34 Score=313.91 Aligned_cols=266 Identities=23% Similarity=0.333 Sum_probs=201.0
Q ss_pred HhcccccccccccccceEEEEEEC-----------------CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA-----------------NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVR 558 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~ 558 (852)
+..+.+.++||+|+||.||++... +...||+|++... .....+|.+|++++.+++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 345778899999999999998532 2346899998743 234567999999999999999999
Q ss_pred eeeeeccCceeeEEEeecCCCCHHHHhhhcccC------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCc
Q 003059 559 LVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEG------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPEN 632 (852)
Q Consensus 559 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 632 (852)
+++++.+.+..++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhe
Confidence 999999999999999999999999999754321 12357888999999999999999998 899999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh--CCcccccccc
Q 003059 633 ILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS--GRRNFEVSQE 710 (852)
Q Consensus 633 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--G~~p~~~~~~ 710 (852)
||+++++.++|+|||+++.+...... .......++..|+|||...+..++.++|||||||++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcce-eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 99999999999999999865432111 11122334678999999988899999999999999999998 6788854322
Q ss_pred ccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 711 TNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
.. ............ ......+. +......+.+++.+|++.||.+||++.+|++.|++
T Consensus 240 ~~---~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQ---VIENTGEFFRDQ-GRQVYLPK------PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HH---HHHHHHHHHhhc-cccccCCC------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11 111011111110 00011010 11122467788999999999999999999999863
No 144
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=8.2e-35 Score=310.53 Aligned_cols=251 Identities=28% Similarity=0.445 Sum_probs=195.1
Q ss_pred ccccccccceEEEEEECC-Cc--EEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLAN-RT--VVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~-~~--~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||+|.+.+ +. .+++|.+... ....+.+..|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 469999999999999754 33 4788888732 33456788999999999 899999999999999999999999999
Q ss_pred CCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 579 GSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 579 gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
++|.+++..... .....+++..++.++.|++.||+|||+ ++++||||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence 999999965431 112358899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhh
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
+++..... ........+..|+|||++....++.++||||||+++|||++ |+.||....... .......
T Consensus 158 l~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-------~~~~~~~ 226 (270)
T cd05047 158 LSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYEKLPQ 226 (270)
T ss_pred Cccccchh----hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-------HHHHHhC
Confidence 98632210 01111234567999999988899999999999999999997 999996432211 0111111
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
+. .. ..+......+.+++.+|++.+|.+||++.++++.|+++.
T Consensus 227 ~~-------~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 GY-------RL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CC-------CC---CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 10 00 011112235678999999999999999999999998764
No 145
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=290.66 Aligned_cols=196 Identities=27% Similarity=0.358 Sum_probs=174.6
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+++.+.||.|.||.|.+++.+ ++..+|+|+++... ...+...+|..+|+.+.||.++++++.+.+.+..||||||
T Consensus 46 fe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmey 125 (355)
T KOG0616|consen 46 FERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEY 125 (355)
T ss_pred hhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEec
Confidence 345678999999999999954 58899999998432 2234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
.+||.|..+|.+.+ .++...++-++.||+.||+|||+ ..|++|||||+|||||.+|.+||.|||+|+.+..
T Consensus 126 v~GGElFS~Lrk~~-----rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 126 VPGGELFSYLRKSG-----RFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred cCCccHHHHHHhcC-----CCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC-
Confidence 99999999997543 48889999999999999999999 8999999999999999999999999999997643
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQE 710 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~ 710 (852)
..-...||+.|+|||.++...+...+|-|+|||++|||+.|.+||...+.
T Consensus 197 -----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 197 -----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred -----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 24567899999999999999999999999999999999999999976543
No 146
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=7e-35 Score=314.19 Aligned_cols=263 Identities=27% Similarity=0.390 Sum_probs=203.4
Q ss_pred HHHhcccccccccccccceEEEEEEC------CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCc
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGK 567 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~ 567 (852)
+...+|.+.++||+|+||.||+|... .+..||+|.+.... .....+.+|+.++++++|+||+++++++.+..
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 34557788899999999999999753 24579999887333 23346788999999999999999999999999
Q ss_pred eeeEEEeecCCCCHHHHhhhcccC-----CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceE
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEG-----SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAK 642 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 642 (852)
..++||||+++|+|.+++...... ....+++..+.+++.|++.||.|||+ ++|+||||||+|||+++++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEE
Confidence 999999999999999999653211 12456778889999999999999998 8999999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHH
Q 003059 643 VSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 643 l~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 721 (852)
|+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....++ . .
T Consensus 160 L~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~----~ 231 (288)
T cd05061 160 IGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---V----L 231 (288)
T ss_pred ECcCCccccccccccc-cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---H----H
Confidence 9999999865432211 11122335678999999999999999999999999999998 788886433211 0 0
Q ss_pred HHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
.....+... ..+......+.+++.+|++.+|++||++.++++.|++..
T Consensus 232 ~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 232 KFVMDGGYL----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHcCCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 111111100 011111246788899999999999999999999998754
No 147
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.7e-35 Score=319.40 Aligned_cols=242 Identities=20% Similarity=0.304 Sum_probs=188.8
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++... +++.||+|.++.. ......+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 5788999998742 22334577888888776 899999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|..++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-- 150 (329)
T cd05618 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-- 150 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--
Confidence 9999888543 358899999999999999999998 899999999999999999999999999987542211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccccccc--chhhHHHHHHHHhhCCcccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETN--RKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.......||..|+|||++.+..++.++||||||+++|||++|+.||....... ......+..........
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------- 222 (329)
T cd05618 151 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------- 222 (329)
T ss_pred -CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-------
Confidence 12234568999999999999999999999999999999999999996432111 11111222222211111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMM 768 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~ 768 (852)
..+......+.+++.+|++.||++||+.
T Consensus 223 ----~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 ----RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ----CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1111223456688889999999999984
No 148
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.7e-35 Score=337.17 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=200.0
Q ss_pred HhcccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc------
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK------ 567 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~------ 567 (852)
...|.+.+.||+|+||.||++.. .+++.||||++... ......+++|+..+..++|+||++++..+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 34788889999999999999985 56889999998633 233456889999999999999999988765332
Q ss_pred --eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEee
Q 003059 568 --HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSD 645 (852)
Q Consensus 568 --~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 645 (852)
..++||||+++|+|.++|..... ....+++..+..++.|++.||+|||+ ++|+||||||+||||+.++.+||+|
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEEe
Confidence 36899999999999999965432 24568899999999999999999998 8999999999999999999999999
Q ss_pred cccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh
Q 003059 646 FGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 646 FGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
||+++.+..... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... . ......
T Consensus 187 FGls~~~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~------~-~~~~~~ 258 (496)
T PTZ00283 187 FGFSKMYAATVS-DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME------E-VMHKTL 258 (496)
T ss_pred cccCeecccccc-ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------H-HHHHHh
Confidence 999987643211 11223456999999999999999999999999999999999999999743211 1 111111
Q ss_pred hCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.+.. ++ .+......+.+++.+||+.+|.+||++.++++.
T Consensus 259 ~~~~----~~------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRY----DP------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCC----CC------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 11 111123456788889999999999999999763
No 149
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.6e-35 Score=309.26 Aligned_cols=258 Identities=21% Similarity=0.325 Sum_probs=204.2
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.+.||+|+||.||++.. .+++.++||.+... .....++.+|+.+++.++|+||+++++++.+++..++|||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 456678899999999999995 57889999987632 2234578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++..... ....+++..++.++.||++||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 83 LADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999864322 24568999999999999999999998 8999999999999999999999999999886643
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. .......++..|+|||++.+..++.++||||||+++|||++|..||......... . ..... ....
T Consensus 159 ~~---~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~----~-~~~~~-----~~~~ 225 (267)
T cd08229 159 KT---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS----L-CKKIE-----QCDY 225 (267)
T ss_pred CC---cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHH----H-hhhhh-----cCCC
Confidence 21 1122345888999999999989999999999999999999999999643221000 0 00111 1111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
+.+. .......+.+++.+|++.+|.+||||.+|++.++++
T Consensus 226 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 226 PPLP----SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCC----cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1111 112334577888899999999999999999999875
No 150
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1e-34 Score=307.15 Aligned_cols=250 Identities=30% Similarity=0.442 Sum_probs=203.2
Q ss_pred hcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
..+.+.+.||.|+||.||++... ++.|++|.+.......+++.+|+.++.+++|+||+++++++.+....++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 35667889999999999999875 67799999986555667899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~-- 156 (256)
T cd05039 85 GSLVDYLRSRG---RAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ-- 156 (256)
T ss_pred CcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc--
Confidence 99999996443 2358999999999999999999998 899999999999999999999999999998653211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
.....+..|+|||.+....++.++||||||+++|||++ |+.||....... .......+...
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~------- 218 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPHVEKGYRM------- 218 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhcCCCC-------
Confidence 12334668999999998899999999999999999997 999986442211 11111111000
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
..+......+.+++.+|++.+|++||++.+++++|+.+
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 ---EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 01111234677889999999999999999999999754
No 151
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.5e-35 Score=311.97 Aligned_cols=258 Identities=23% Similarity=0.375 Sum_probs=199.8
Q ss_pred HhcccccccccccccceEEEEEE-CCCc----EEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVL-ANRT----VVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~----~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
...+.+.++||+|+||.||+|.+ .++. .||+|++... .....++.+|+.++..++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 34566778999999999999985 3343 4899998732 3345678899999999999999999999875 4578
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+++||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++
T Consensus 85 l~~~~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN----KDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred EEEEcCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCcee
Confidence 999999999999999643 2358899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNV 729 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (852)
.+...... .......++..|+|||.+.+..++.++||||||+++|||++ |..||+...... +. ..+..+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~----~~~~~~~~ 229 (279)
T cd05109 158 LLDIDETE-YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IP----DLLEKGER 229 (279)
T ss_pred ecccccce-eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHHCCCc
Confidence 76432111 11122334678999999998899999999999999999998 999986432211 11 11111110
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
. +.+......+.+++..|++.||++||++.++++.|+.+...
T Consensus 230 ~----------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 230 L----------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred C----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 0 11111234567888999999999999999999999877543
No 152
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.5e-35 Score=320.87 Aligned_cols=250 Identities=21% Similarity=0.227 Sum_probs=195.7
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||++... +++.||+|+++... ...+.+..|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 3567889999999999999864 58899999997432 244668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 82 YQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 99999999999654 2358899999999999999999999 8999999999999999999999999999987643
Q ss_pred CCCcceeeeeecCCCCCCChhhhh------cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLA------NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
... .......||+.|+|||.+. ...++.++|||||||++|||++|+.||....... ....+...
T Consensus 155 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-------~~~~i~~~- 224 (330)
T cd05601 155 NKM--VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-------TYNNIMNF- 224 (330)
T ss_pred CCc--eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-------HHHHHHcC-
Confidence 221 1223356899999999986 4567899999999999999999999996443211 11111111
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+. . +........+.+++..|++ +|.+||++.++++
T Consensus 225 -~~~~~--~---~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 225 -QRFLK--F---PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred -CCccC--C---CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 00000 0 1111122345567777887 9999999999875
No 153
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.6e-35 Score=317.54 Aligned_cols=266 Identities=26% Similarity=0.399 Sum_probs=207.2
Q ss_pred HHHHhcccccccccccccceEEEEEEC--------CCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeee
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLA--------NRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFS 563 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~ 563 (852)
++....+.+.+.||+|+||.||++... ++..||+|.+... ....+++.+|+.++..+ +||||+++++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 345566778899999999999999741 2357999988743 33456789999999999 899999999999
Q ss_pred ccCceeeEEEeecCCCCHHHHhhhcccC-----------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCc
Q 003059 564 SEGKHRLLVYEFMKNGSLDNFLFANEEG-----------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPEN 632 (852)
Q Consensus 564 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 632 (852)
......++||||+++++|.+++...... ....+++..++.++.||++||.|||+ ++++||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccce
Confidence 9999999999999999999999754321 12458899999999999999999998 899999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccc
Q 003059 633 ILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQET 711 (852)
Q Consensus 633 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~ 711 (852)
||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred EEEcCCCcEEECCCccceeccccccc-ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 99999999999999999876432211 11122345678999999998899999999999999999998 78888643211
Q ss_pred cchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 712 NRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 712 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
. ........... ..+......+.+++.+|++.+|.+||++.+|++.|+++...
T Consensus 247 ~-------~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 247 E-------LFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred H-------HHHHHHcCCcC----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1 11111111100 11112234567788999999999999999999999887654
No 154
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7.7e-35 Score=319.47 Aligned_cols=240 Identities=26% Similarity=0.297 Sum_probs=187.7
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecCc----ccchHHHHHHHH-HhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI----EQGEKQFRMEVA-TISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~~f~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++.. .+++.||+|++... .....++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999985 46889999998632 223345555655 46779999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|..++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--- 149 (325)
T cd05604 81 GELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--- 149 (325)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---
Confidence 9999888543 358899999999999999999998 89999999999999999999999999998753221
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||....... ......... +.
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-------~~~~~~~~~--------~~ 214 (325)
T cd05604 150 SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE-------MYDNILHKP--------LV 214 (325)
T ss_pred CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH-------HHHHHHcCC--------cc
Confidence 112234568999999999999999999999999999999999999997542110 111111111 10
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
........+.+++.+|++.+|.+||++.+.++
T Consensus 215 ---~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 215 ---LRPGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred ---CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 01112235667888899999999999864443
No 155
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.1e-35 Score=319.99 Aligned_cols=236 Identities=24% Similarity=0.317 Sum_probs=188.4
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++... +++.||+|++... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 5789999998732 23345677888888876 699999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-- 150 (320)
T cd05590 81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-- 150 (320)
T ss_pred chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--
Confidence 9999988643 348899999999999999999998 899999999999999999999999999987543211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-------~~~~i~~~~~--------- 213 (320)
T cd05590 151 -KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-------LFEAILNDEV--------- 213 (320)
T ss_pred -CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-------HHHHHhcCCC---------
Confidence 12234568999999999999999999999999999999999999997543211 1111111110
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
..+......+.+++.+|++.||++||++.
T Consensus 214 --~~~~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 214 --VYPTWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred --CCCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 00111123567788899999999999983
No 156
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=322.45 Aligned_cols=248 Identities=24% Similarity=0.352 Sum_probs=206.1
Q ss_pred ccccccccccccceEEEEEECC--C--cEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN--R--TVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~--~--~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
..+.|+||+|.||.|++|.|.. | -.||||.+..... ...+|.+|+.+|.+|+|+|+++|+|+..+ ...+||+|
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 3456899999999999999753 3 3689999984433 56889999999999999999999999888 78899999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
.++.|||.+.|++. ....+.......++.|||.||.||.. +++|||||.++|+||-....+||+||||.+.+..
T Consensus 191 LaplGSLldrLrka---~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKA---KKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hcccchHHHHHhhc---cccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 99999999999763 34568888899999999999999998 8999999999999999999999999999999887
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.++.........-...|+|||.++...++.++|||+|||++|||+| |..||.+..... +.+.+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------------IL~~i 328 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------------ILKNI 328 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------------HHHhc
Confidence 6655433344556788999999999999999999999999999998 788997543221 11122
Q ss_pred c--cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 734 D--KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 734 d--~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
| .+| +.+....+++.+++..||..+|++||++..|++.
T Consensus 329 D~~erL---pRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 329 DAGERL---PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred cccccC---CCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 2 112 3344566788899999999999999999999743
No 157
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.8e-34 Score=341.38 Aligned_cols=265 Identities=22% Similarity=0.310 Sum_probs=200.0
Q ss_pred CHHHHHHhcccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeecc--
Q 003059 492 SYKELQRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSE-- 565 (852)
Q Consensus 492 ~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~-- 565 (852)
...++....|.+.++||+|+||.||++... .+..||+|.+... ......|..|+.++.+++|||||++++++.+
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 334556667889999999999999999964 4678999988732 2334678899999999999999999998754
Q ss_pred CceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhcccc----CCCcccCCCCCCceEeCC----
Q 003059 566 GKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEEC----RDCIVHCDIKPENILLDE---- 637 (852)
Q Consensus 566 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----~~~ivH~Dlkp~NILl~~---- 637 (852)
....||||||+++++|.++|..... ....+++..++.|+.||+.||.|||+.. ..+||||||||+||||+.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 4578999999999999999965322 1346899999999999999999999732 145999999999999964
Q ss_pred -------------CCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhc--CCCCCCccchhhhHHHHHHHhCC
Q 003059 638 -------------NYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN--LPITSKSDVYSYGMVLLEIVSGR 702 (852)
Q Consensus 638 -------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltG~ 702 (852)
...+||+|||+++.+.... ......||+.|+|||++.+ ..++.++|||||||+||||++|+
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 3348999999998664321 1234568999999999864 45889999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH--HHhcC
Q 003059 703 RNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ--MLEGI 778 (852)
Q Consensus 703 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~--~L~~~ 778 (852)
.||....... . ....+... +.+.. ......+.+++..||+.+|.+||++.++++ .+..+
T Consensus 241 ~PF~~~~~~~-----q-li~~lk~~-------p~lpi----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 241 TPFHKANNFS-----Q-LISELKRG-------PDLPI----KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CCCCcCCcHH-----H-HHHHHhcC-------CCCCc----CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 9996432111 1 11111111 01100 011245678889999999999999999983 44433
No 158
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.3e-35 Score=319.07 Aligned_cols=239 Identities=22% Similarity=0.302 Sum_probs=190.0
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhccccc-ceeeeeeeeccCceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHL-NLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~-niv~l~g~~~~~~~~~lV~e 574 (852)
|.+.+.||+|+||.||+|... +++.||||++... ....+.+..|++++..++|+ +|+++++++.+.+..++|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 567789999999999999965 4678999998732 23445678899999999765 68889999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 82 YVNGGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred CCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999998543 247889999999999999999998 8999999999999999999999999999875322
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .........
T Consensus 154 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-------~~~~i~~~~------ 217 (324)
T cd05587 154 G---GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-------LFQSIMEHN------ 217 (324)
T ss_pred C---CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCC------
Confidence 1 122344679999999999999999999999999999999999999997543211 011111111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMM 768 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~ 768 (852)
. ..+......+.+++.+|++.||.+|++.
T Consensus 218 ~-----~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 V-----SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred C-----CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 0 0111122356788889999999999986
No 159
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.8e-34 Score=316.65 Aligned_cols=243 Identities=21% Similarity=0.282 Sum_probs=190.3
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++... +++.||+|+++.. ....+.+..|+.++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 5788999999743 22345678899998888 699999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|..++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 150 (327)
T cd05617 81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-- 150 (327)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--
Confidence 9999988543 358999999999999999999999 899999999999999999999999999987532211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.............+......... .
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------~- 220 (327)
T cd05617 151 -DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--------I- 220 (327)
T ss_pred -CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC--------C-
Confidence 122345689999999999999999999999999999999999999965432221111122222221111 0
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
..+......+.+++.+|++.||.+|+++.
T Consensus 221 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 --RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred --CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 01111123456788889999999999853
No 160
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.6e-35 Score=310.12 Aligned_cols=256 Identities=31% Similarity=0.479 Sum_probs=200.5
Q ss_pred hcccccccccccccceEEEEEECC-C---cEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLAN-R---TVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
..+.+.+.||+|+||.||+|.... + ..|+||.+... .....+|..|+.++++++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 356788999999999999999643 2 36999998743 33456899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++... ...+++..++.++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||+++..
T Consensus 84 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 84 TEFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999998643 2358899999999999999999998 89999999999999999999999999998865
Q ss_pred CCCCCcceeeeeec--CCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCc
Q 003059 653 NPKDHRHRTLTSVR--GTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNV 729 (852)
Q Consensus 653 ~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (852)
.............. .+..|+|||.+.+..++.++||||||+++|||++ |..||...... ... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~----~~i~~~-- 227 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVI----NAIEQD-- 227 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHH----HHHHcC--
Confidence 43222111111111 2457999999999999999999999999999886 99999643321 111 111110
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
. .+ +.+.+....+.+++.+|++.+|.+||++.+|++.|+++
T Consensus 228 ---~--~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 ---Y--RL---PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---C--cC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 00 11112234567888999999999999999999998764
No 161
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2e-34 Score=308.75 Aligned_cols=246 Identities=27% Similarity=0.352 Sum_probs=191.8
Q ss_pred ccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 507 LGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
||+|+||.||++... +++.+|+|.+... ......+..|++++.+++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999864 5889999998632 12234566799999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+||++++++.++|+|||++...... ..
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~----~~ 150 (277)
T cd05607 81 KYHIYNVG---ERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG----KT 150 (277)
T ss_pred HHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC----ce
Confidence 99885432 3458899999999999999999998 89999999999999999999999999998865432 12
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||......... ... ...... ..+... .
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~--~~~-~~~~~~----~~~~~~--~-- 219 (277)
T cd05607 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--EEL-KRRTLE----DEVKFE--H-- 219 (277)
T ss_pred eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--HHH-HHHhhc----cccccc--c--
Confidence 23356899999999999989999999999999999999999999643221110 000 011111 001000 0
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
......+.+++..|++.||++||+++|+++.+
T Consensus 220 --~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 --QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred --ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 01123467888889999999999998766433
No 162
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.4e-34 Score=306.08 Aligned_cols=249 Identities=29% Similarity=0.398 Sum_probs=197.2
Q ss_pred hcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeec-cCceeeEEEeecC
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSS-EGKHRLLVYEFMK 577 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~-~~~~~~lV~e~~~ 577 (852)
..+.+.+.||+|+||.||++... +..|++|.+.... ..+.|.+|+.++++++|+|++++++++. +++..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 35677889999999999999875 5668999887433 3567899999999999999999999754 5567899999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++.... ...+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 84 KGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 999999986532 3358899999999999999999998 899999999999999999999999999987643211
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .+ ......+.. .
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~---~~----~~~~~~~~~-----~- 218 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DV----VPRVEKGYK-----M- 218 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHhcCCC-----C-
Confidence 12234567999999999899999999999999999998 99998643211 01 111111100 0
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.........+.+++.+|++.+|++||++.++++.|+++
T Consensus 219 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 ----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 01111234567888999999999999999999999764
No 163
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-34 Score=312.95 Aligned_cols=258 Identities=28% Similarity=0.424 Sum_probs=201.6
Q ss_pred hcccccccccccccceEEEEEEC------CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
..+.+.++||+|+||.||++... ++..||+|++... .....+|.+|+.++++++||||+++++++.++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 45667789999999999999863 4678999998743 234567999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhccc-----------------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCce
Q 003059 571 LVYEFMKNGSLDNFLFANEE-----------------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENI 633 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI 633 (852)
+||||+++++|.+++..... .....+++..++.++.|++.||+|||+ .+++||||||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~ni 161 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRNC 161 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhhe
Confidence 99999999999999964321 112357889999999999999999998 8999999999999
Q ss_pred EeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCcccccccccc
Q 003059 634 LLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETN 712 (852)
Q Consensus 634 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~ 712 (852)
++++++.+||+|||+++.+...... ........+..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~ 240 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYY-KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240 (288)
T ss_pred EecCCCceEECccccceecccCccc-cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999998765432111 11112234667999999998999999999999999999998 888885432211
Q ss_pred chhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 713 RKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 713 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
.......+.... .+......+.+++.+|++.+|.+||++.||++.|++
T Consensus 241 -------~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 -------VIYYVRDGNVLS----------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -------HHHHHhcCCCCC----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111112221110 011123467789999999999999999999999864
No 164
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.7e-35 Score=322.86 Aligned_cols=264 Identities=28% Similarity=0.415 Sum_probs=201.3
Q ss_pred HHhcccccccccccccceEEEEEE------CCCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeeeecc-C
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVL------ANRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGFSSE-G 566 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~-~ 566 (852)
...++.+.+.||+|+||.||+|.. .+++.||||+++.. ......+.+|++++.++ +|+||+++++++.. +
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 345788899999999999999973 34678999999743 22345688999999999 78999999998765 4
Q ss_pred ceeeEEEeecCCCCHHHHhhhcccC-------------------------------------------------------
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEEG------------------------------------------------------- 591 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 591 (852)
...++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 5678999999999999998643210
Q ss_pred -------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeee
Q 003059 592 -------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTS 664 (852)
Q Consensus 592 -------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 664 (852)
....+++..+..++.||++||+|||+ ++|+||||||+|||+++++.+||+|||+++........ .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~ 240 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-VRKGD 240 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcch-hhcCC
Confidence 01347888999999999999999998 89999999999999999999999999999865332111 11122
Q ss_pred ecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCC
Q 003059 665 VRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVD 743 (852)
Q Consensus 665 ~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 743 (852)
..++..|+|||.+.+..++.++||||||+++|||++ |..||....... . .......+.... ... .
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~----~~~~~~~~~~~~-----~~~-~-- 306 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E----FCRRLKEGTRMR-----APD-Y-- 306 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--H----HHHHHhccCCCC-----CCC-C--
Confidence 345678999999999899999999999999999997 999986432211 0 111111111100 000 1
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 744 IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 744 ~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
....+.+++.+|++.+|++||++.+|++.|+.+..
T Consensus 307 --~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 307 --TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 12356788899999999999999999999987654
No 165
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.2e-34 Score=304.29 Aligned_cols=248 Identities=25% Similarity=0.387 Sum_probs=200.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|+||.||++... +++.|++|.+... .....++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 456788999999999999964 5788999998632 344567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..+..++.|++.||.|||+ .+++|+||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 82 ENGDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999997542 3468899999999999999999998 899999999999999999999999999998764322
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ......++..|+|||++.+..++.++||||||+++|||++|+.||....... .......+...
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~------ 219 (256)
T cd08529 156 N---FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-------LILKIIRGVFP------ 219 (256)
T ss_pred c---hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCCCC------
Confidence 1 1223457889999999999999999999999999999999999997543210 11111111110
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+......+.+++.+|++.+|++||++.++++.
T Consensus 220 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 ----PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1111223467889999999999999999999863
No 166
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.1e-34 Score=314.71 Aligned_cols=259 Identities=28% Similarity=0.415 Sum_probs=202.5
Q ss_pred HHhcccccccccccccceEEEEEEC------CCcEEEEEEecCcc--cchHHHHHHHHHhhcc-cccceeeeeeeeccCc
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIE--QGEKQFRMEVATISST-HHLNLVRLVGFSSEGK 567 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~ 567 (852)
....+.+.+.||+|+||.||++... .+..||+|+++... ...+.+.+|+++++++ +|+||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3445777889999999999999741 24579999987432 2345789999999999 7999999999999999
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
..++||||+++++|.+++.... ...+++.++..++.|++.||+|||+ .+|+|+||||+|||++.++.+||+|||
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999996432 2348999999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhh
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .+ ......
T Consensus 187 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--~~----~~~~~~ 259 (302)
T cd05055 187 LARDIMNDSNY-VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--KF----YKLIKE 259 (302)
T ss_pred ccccccCCCce-eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--HH----HHHHHc
Confidence 99866432211 11122345778999999999999999999999999999998 999986433211 00 111111
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
+. .. ..+......+.+++.+|++.+|++||++.+|++.|+++
T Consensus 260 ~~-----~~-----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 260 GY-----RM-----AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CC-----cC-----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 10 00 00111124577889999999999999999999999764
No 167
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=298.12 Aligned_cols=267 Identities=23% Similarity=0.294 Sum_probs=200.0
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCccc---chHHHHHHHHHhhcccccc-eeeeeeeeccCc------e
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQ---GEKQFRMEVATISSTHHLN-LVRLVGFSSEGK------H 568 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~f~~E~~~l~~l~h~n-iv~l~g~~~~~~------~ 568 (852)
.+...++||+|.||+||+|+. .+|+.||+|++.-..+ .-..-.+|+.++++++|+| ||+|++++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 344467899999999999994 5688999999973322 2345689999999999999 999999998777 7
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++|+||+ .-+|..|+....... ..++-..+..+..||++||+|||+ ++|+||||||+||||+++|.+||+|||+
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccch
Confidence 89999999 559999996554321 346668899999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG 727 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (852)
|+...-. ....+..++|.-|.|||++.+. .|+...||||+||++.||++++..|.+..+.++...+........+.
T Consensus 167 Ara~~ip---~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 167 ARAFSIP---MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred HHHhcCC---cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 9976522 2234566788889999999877 79999999999999999999999998765533222221111111111
Q ss_pred Cccc---ccccc--cCCC--CCCHHH-----HHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 728 NVKG---IVDKS--LAGE--DVDIEQ-----VMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 728 ~~~~---~~d~~--l~~~--~~~~~~-----~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.... +.+-. .... +.+... .....+++.+|++.+|.+|.+++.+++.
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1111 11111 1000 001100 1357788999999999999999998875
No 168
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-34 Score=315.26 Aligned_cols=263 Identities=25% Similarity=0.391 Sum_probs=203.9
Q ss_pred HHhcccccccccccccceEEEEEEC--------CCcEEEEEEecCcc--cchHHHHHHHHHhhcc-cccceeeeeeeecc
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLA--------NRTVVAVKQLEGIE--QGEKQFRMEVATISST-HHLNLVRLVGFSSE 565 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~ 565 (852)
....+.+.++||+|+||.||++... ....+|+|.+.... ....++..|++++.++ +||||+++++++.+
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3456677899999999999999742 24578999887432 3346788999999999 69999999999999
Q ss_pred CceeeEEEeecCCCCHHHHhhhccc-----------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceE
Q 003059 566 GKHRLLVYEFMKNGSLDNFLFANEE-----------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENIL 634 (852)
Q Consensus 566 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIL 634 (852)
++..++||||+++|+|.+++..... .....+++..+++++.||+.||.|||+ ++++||||||+|||
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEE
Confidence 9999999999999999999965421 123468999999999999999999998 89999999999999
Q ss_pred eCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccc
Q 003059 635 LDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNR 713 (852)
Q Consensus 635 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~ 713 (852)
+++++.+||+|||+++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~- 244 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYK-KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE- 244 (314)
T ss_pred EcCCCcEEEcccccccccccccccc-ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999998664321111 1112234567999999999899999999999999999999 889986432211
Q ss_pred hhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 714 KKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 714 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
.......+... ..+......+.+++.+|++.+|++||++.++++.|+++..
T Consensus 245 ------~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 245 ------LFKLLREGHRM----------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred ------HHHHHHcCCCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11111111110 1111122356688899999999999999999999988754
No 169
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.4e-35 Score=324.95 Aligned_cols=251 Identities=20% Similarity=0.270 Sum_probs=192.4
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.+.||+|+||.||++... +++.||||++... ......+.+|+.++..++|+||+++++++.++...++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 3566789999999999999964 5789999999742 2233567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 82 YLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999643 348899999999999999999998 8999999999999999999999999999876532
Q ss_pred CCCcc-----------------------------------eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHH
Q 003059 655 KDHRH-----------------------------------RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIV 699 (852)
Q Consensus 655 ~~~~~-----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ell 699 (852)
..... .......||+.|+|||++....++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 11000 0011235899999999999999999999999999999999
Q ss_pred hCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCC---HHHHHH
Q 003059 700 SGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM---MGKVVQ 773 (852)
Q Consensus 700 tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt---~~ev~~ 773 (852)
+|+.||....... .......... .+ .... .......+.+++.+|+. +|.+|++ +.++++
T Consensus 234 ~G~~Pf~~~~~~~-------~~~~i~~~~~-~~---~~~~---~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDNPQE-------TYRKIINWKE-TL---QFPD---EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCCHHH-------HHHHHHcCCC-cc---CCCC---CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999997543211 0111111000 00 0000 00112234556666776 8999998 777765
No 170
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-34 Score=316.57 Aligned_cols=240 Identities=24% Similarity=0.328 Sum_probs=189.5
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhc-ccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISS-THHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~-l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||+|... +++.||||+++.. ......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 4788999998743 2334556678888876 4899999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 150 (316)
T cd05619 81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-- 150 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--
Confidence 9999998542 348889999999999999999998 899999999999999999999999999987532211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......... +..
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-------~~~~i~~~~------~~~- 215 (316)
T cd05619 151 -AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-------LFQSIRMDN------PCY- 215 (316)
T ss_pred -CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCC------CCC-
Confidence 12234568999999999999999999999999999999999999997543211 111111110 111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG-KVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~-ev~~ 773 (852)
+......+.+++.+|++.||.+||++. ++.+
T Consensus 216 ----~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 ----PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred ----CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111223466888899999999999997 5543
No 171
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1e-34 Score=318.23 Aligned_cols=239 Identities=23% Similarity=0.305 Sum_probs=189.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e 574 (852)
+.+.+.||+|+||.||+|... +++.||+|.+... ......+..|..++..+ +|++|+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 456789999999999999865 4678999998742 22234567788888776 68999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 82 ~~~~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 82 YVNGGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999988543 348889999999999999999998 8999999999999999999999999999975432
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 154 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-------~~~~i~~~~~----- 218 (323)
T cd05616 154 DG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-------LFQSIMEHNV----- 218 (323)
T ss_pred CC---CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC-----
Confidence 11 12234568999999999999999999999999999999999999997543211 1111111110
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMM 768 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~ 768 (852)
..+......+.+++.+|++.+|.+|++.
T Consensus 219 ------~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 ------AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1111223456788899999999999985
No 172
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.2e-34 Score=316.90 Aligned_cols=240 Identities=24% Similarity=0.309 Sum_probs=191.3
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++... +++.||+|.+... ......+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 4788999998732 23345677888888877 799999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|..++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 150 (318)
T cd05570 81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-- 150 (318)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--
Confidence 9999988543 248899999999999999999998 899999999999999999999999999987532211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 151 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-------~~~~i~~~~~--------- 213 (318)
T cd05570 151 -VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-------LFQSILEDEV--------- 213 (318)
T ss_pred -CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-------HHHHHHcCCC---------
Confidence 12233568999999999999999999999999999999999999997443211 1111111110
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCH-----HHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMM-----GKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~-----~ev~~ 773 (852)
..+......+.+++.+|++.||.+||++ .++++
T Consensus 214 --~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 --RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred --CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0111122356788899999999999999 77764
No 173
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-34 Score=306.41 Aligned_cols=239 Identities=23% Similarity=0.396 Sum_probs=186.7
Q ss_pred ccccccccceEEEEEECC-------------CcEEEEEEecCcc-cchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 505 DKLGAGGFGAVYRGVLAN-------------RTVVAVKQLEGIE-QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~l~~~~-~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
+.||+|+||.||+|++.. ...|++|.+.... .....|..|+.++..++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 469999999999998532 2358889887433 33457888999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc-------eEE
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN-------AKV 643 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~-------~kl 643 (852)
+||||+++++|+.++... ...+++..++.++.||++||+|||+ ++|+||||||+|||++.++. +|+
T Consensus 81 lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999988543 2358899999999999999999998 89999999999999987664 899
Q ss_pred eecccccccCCCCCcceeeeeecCCCCCCChhhhh-cCCCCCCccchhhhHHHHHHH-hCCccccccccccchhhHHHHH
Q 003059 644 SDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLA-NLPITSKSDVYSYGMVLLEIV-SGRRNFEVSQETNRKKFSLWAY 721 (852)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~ell-tG~~p~~~~~~~~~~~l~~~~~ 721 (852)
+|||++...... ....++..|+|||.+. +..++.++||||||+++|||+ +|+.||........
T Consensus 154 ~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------- 218 (262)
T cd05077 154 SDPGIPITVLSR-------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------- 218 (262)
T ss_pred CCCCCCccccCc-------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH--------
Confidence 999998754321 2245788899999887 467899999999999999998 58888764321110
Q ss_pred HHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
........ ... .. ....+.+++.+||+.||.+||++.+|++.|+
T Consensus 219 ~~~~~~~~------~~~--~~---~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 219 ERFYEGQC------MLV--TP---SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHHhcCc------cCC--CC---ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 01111100 000 11 1235678889999999999999999998763
No 174
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8.4e-35 Score=324.47 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=196.1
Q ss_pred HhcccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
...|.+.++||+|+||.||++... +++.||+|.+... ....+.+..|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 346777889999999999999864 5789999998632 22345578899999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++|+|.+++.. ..++...+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 122 ~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 122 MEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999853 237778888899999999999998 89999999999999999999999999999865
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcC----CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANL----PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
..... .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||....... ....+....
T Consensus 193 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-------~~~~i~~~~ 263 (370)
T cd05596 193 DANGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-------TYSKIMDHK 263 (370)
T ss_pred cCCCc--ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-------HHHHHHcCC
Confidence 43211 112345699999999998653 47899999999999999999999997543210 111111110
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQ--RPMMGKVVQM 774 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~--RPt~~ev~~~ 774 (852)
. .+ .. +........+.+++..|++.+|.+ ||++.++++.
T Consensus 264 ~-~~---~~---~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 264 N-SL---TF---PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred C-cC---CC---CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 00 00 111112345667888899999988 9999999754
No 175
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.6e-34 Score=303.25 Aligned_cols=251 Identities=33% Similarity=0.476 Sum_probs=202.0
Q ss_pred ccccccccceEEEEEECC----CcEEEEEEecCcccc--hHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLAN----RTVVAVKQLEGIEQG--EKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~--~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++.... +..|++|.+...... .+++.+|++.+.+++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999654 788999999854433 57899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccC----CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 579 GSLDNFLFANEEG----SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 579 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
++|.+++...... ....+++..+..++.|++.||+|||+ ++++||||||+||++++++.+||+|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999654211 13568999999999999999999999 8999999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
... ........++..|+|||.+....++.++||||||++++||++ |..||....... .......+..
T Consensus 158 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~---- 225 (262)
T cd00192 158 DDY-YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-------VLEYLRKGYR---- 225 (262)
T ss_pred ccc-cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC----
Confidence 321 122234557889999999998899999999999999999999 699997552211 1111111100
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
. ..+......+.+++.+|++.+|.+||++.++++.|+
T Consensus 226 ---~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 ---L---PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---C---CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0 111112346778899999999999999999999874
No 176
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-34 Score=316.84 Aligned_cols=239 Identities=23% Similarity=0.314 Sum_probs=188.6
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||++... +++.||+|.++.. ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999975 5788999998742 23345567788887754 899999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+++... ..+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 149 (316)
T cd05620 81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--- 149 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---
Confidence 9999998543 347888999999999999999998 89999999999999999999999999998743211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ........ .+.+.
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-------~~~~~~~~------~~~~~ 216 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-------LFESIRVD------TPHYP 216 (316)
T ss_pred CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhC------CCCCC
Confidence 122344668999999999999999999999999999999999999996443210 11111111 01111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHH-HHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG-KVV 772 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~-ev~ 772 (852)
......+.+++.+|++.||.+||++. ++.
T Consensus 217 -----~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 -----RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -----CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11123566788899999999999985 554
No 177
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.1e-34 Score=324.88 Aligned_cols=202 Identities=23% Similarity=0.312 Sum_probs=170.9
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||++... +++.||||.+... ......+.+|++++.+++|+||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 3667889999999999999964 5789999998632 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ..++...+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 82 YIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999643 347888888999999999999998 8999999999999999999999999999753321
Q ss_pred CCC----------------------------------------cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHH
Q 003059 655 KDH----------------------------------------RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMV 694 (852)
Q Consensus 655 ~~~----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvv 694 (852)
... .........||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 000 0000113469999999999999999999999999999
Q ss_pred HHHHHhCCccccccc
Q 003059 695 LLEIVSGRRNFEVSQ 709 (852)
Q Consensus 695 l~elltG~~p~~~~~ 709 (852)
+|||++|+.||....
T Consensus 234 lyell~G~~Pf~~~~ 248 (376)
T cd05598 234 LYEMLVGQPPFLADT 248 (376)
T ss_pred eeehhhCCCCCCCCC
Confidence 999999999997543
No 178
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-34 Score=322.40 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=192.8
Q ss_pred HhcccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
...|.+.++||+|+||.||++... +++.+|+|.+... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 356778889999999999999975 4788999998632 22345678999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++|+|.+++... .+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++..
T Consensus 122 ~Ey~~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 122 MEYMPGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 9999999999998532 37888899999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCC----CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLP----ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
.... ........||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....... ....+....
T Consensus 193 ~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-------~~~~i~~~~ 263 (370)
T cd05621 193 DETG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-------TYSKIMDHK 263 (370)
T ss_pred ccCC--ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCC
Confidence 4321 11223456999999999997643 7889999999999999999999997443211 011111110
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQ--RPMMGKVVQM 774 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~--RPt~~ev~~~ 774 (852)
. .+.- +........+.+++..|++.++.+ ||++.++++.
T Consensus 264 ~------~~~~-p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 N------SLNF-PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred c------ccCC-CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0 0000 111112234456666777755543 8899998864
No 179
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.3e-34 Score=306.49 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=197.6
Q ss_pred HhcccccccccccccceEEEEEE-CCCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
...|.+.++||+|+||.||+|+. .+++.||+|++... ......+++|+.++.+++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34577788999999999999996 56788999998733 33445688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++.+...
T Consensus 88 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 88 CGGGSLQDIYHVT-----GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 9999999998533 347899999999999999999998 89999999999999999999999999999865321
Q ss_pred CCcceeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
. .......++..|+|||.+. ...++.++||||||+++|||++|+.||.......... .... ...
T Consensus 160 ~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-------~~~~---~~~ 226 (267)
T cd06646 160 I---AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-------LMSK---SNF 226 (267)
T ss_pred c---cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-------eeec---CCC
Confidence 1 1112345788999999884 3457889999999999999999999985332111000 0000 000
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
..+... ........+.+++.+|++.+|++||++++|++.|
T Consensus 227 ~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 QPPKLK---DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCc---cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 001110 0111234677889999999999999999998643
No 180
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.4e-34 Score=307.33 Aligned_cols=248 Identities=24% Similarity=0.350 Sum_probs=194.5
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
+.+.+.||+|+||.||+|.. .+++.||+|.+... .....++.+|++++.+++||||+++++++...+..++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 45678899999999999985 46788999998633 2334678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|..+. .+++..+..++.|++.||.|||+ .+|+|+||||+|||++.++.+||+|||++......
T Consensus 83 ~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 83 GGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred CCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 99997653 36778888999999999999998 89999999999999999999999999999865332
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
......++..|+|||.+.+..++.++||||||+++|||++|+.||.............-........ ..+.+
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 220 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-----DPPVL 220 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-----CCCCC
Confidence 1223468899999999999999999999999999999999999996533221111000000111100 01111
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.. ......+.+++.+|++.+|++||+++++++.
T Consensus 221 ~~----~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 PV----GQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CC----CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11 1122356788889999999999999999864
No 181
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.5e-34 Score=309.94 Aligned_cols=247 Identities=21% Similarity=0.340 Sum_probs=198.3
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
+|.+.++||+|+||.||+|.. .+++.|++|.+.. .....+.+.+|+.+++.++|+||+++++.+..+.+.++||||++
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~ 100 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccC
Confidence 566778999999999999985 4578999999873 33345678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++........
T Consensus 101 ~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 101 GGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred CCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 9999999842 247889999999999999999998 8999999999999999999999999999886543211
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
......+++.|+|||.+.+..++.++|||||||++|||++|+.||........ + ....... .+.+
T Consensus 172 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~--~----~~~~~~~------~~~~ 236 (296)
T cd06654 172 ---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--L----YLIATNG------TPEL 236 (296)
T ss_pred ---ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh--H----HHHhcCC------CCCC
Confidence 12234588899999999988899999999999999999999999965432111 0 0000000 0011
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+......+.+++.+|++.+|++||++.+|++
T Consensus 237 ---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 237 ---QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ---CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 111122245678889999999999999999986
No 182
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-34 Score=289.43 Aligned_cols=259 Identities=20% Similarity=0.266 Sum_probs=195.2
Q ss_pred cccccccccceEEEEEE-CCCcEEEEEEecCcccch---HHHHHHHHHhhcccccceeeeeeeec--cCceeeEEEeecC
Q 003059 504 KDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGE---KQFRMEVATISSTHHLNLVRLVGFSS--EGKHRLLVYEFMK 577 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~---~~f~~E~~~l~~l~h~niv~l~g~~~--~~~~~~lV~e~~~ 577 (852)
.++|++|.||.||+|+. ++++.||+|+++.....+ -.-.+||.+|.+++|||||.+-.+.. +-+..|||||||+
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E 160 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE 160 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH
Confidence 46899999999999995 468899999998444222 23578999999999999999988754 4457999999997
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
. +|..++... .+++...++.-+..|+++||+|||. ..|+|||||++|+|+...|.+||+|||+||.+...
T Consensus 161 h-DLksl~d~m----~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-- 230 (419)
T KOG0663|consen 161 H-DLKSLMETM----KQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-- 230 (419)
T ss_pred h-hHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCC--
Confidence 6 888888543 3568888999999999999999999 89999999999999999999999999999988643
Q ss_pred cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc-
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK- 735 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~- 735 (852)
....+..+-|.-|.|||.+.+. .|+...|+||+|||+.||+++++.|.+..+.++.+.+........+......-..
T Consensus 231 -~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 231 -LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred -cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence 3445667789999999999875 6899999999999999999999999877655443332221111111111110000
Q ss_pred -----ccCCC-------CCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 736 -----SLAGE-------DVDIE-QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 736 -----~l~~~-------~~~~~-~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..... .+... -.+...++.-..+..||++|-|+.+.++
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 00000 00000 1134456677788999999999998775
No 183
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.2e-34 Score=339.55 Aligned_cols=263 Identities=20% Similarity=0.284 Sum_probs=200.9
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||+|... .++.||+|++... ....++|.+|++++++++||||+++++++.+++..++|||
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME 82 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP 82 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence 4677889999999999999965 4889999998732 2234678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccc------CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 575 FMKNGSLDNFLFANEE------GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
|+++++|.+++..... .....+++..+++++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecCc
Confidence 9999999999864211 112346778889999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCc---------------ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccc
Q 003059 649 AKLINPKDHR---------------HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNR 713 (852)
Q Consensus 649 a~~~~~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~ 713 (852)
++........ ........||+.|+|||.+.+..++.++|||||||++|||++|+.||........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 9876221100 0011224699999999999999999999999999999999999999975322110
Q ss_pred hhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHHhcCcc
Q 003059 714 KKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-MMGKVVQMLEGITE 780 (852)
Q Consensus 714 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-t~~ev~~~L~~~~~ 780 (852)
.... .. .++.-. ....+....+.+++.+|++.||++|| +++++.+.|+....
T Consensus 240 ------~~~~----~i---~~P~~~--~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 240 ------SYRD----VI---LSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred ------hhhh----hc---cChhhc--cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0000 00 000000 00011123466788899999999995 56777777776543
No 184
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.7e-34 Score=305.80 Aligned_cols=251 Identities=31% Similarity=0.470 Sum_probs=198.3
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEecCcccchHH---HHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQ---FRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~---f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|++.+.||+|+||+||++.... ++.+|+|.+......... ...|+.++.+++|+||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4677899999999999999765 568999999855443332 345999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.. ...+++..++.++.|+++||++||+ .+|+|+||||+||++++++.++|+|||.+....
T Consensus 81 ~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--- 149 (260)
T PF00069_consen 81 PGGSLQDYLQK-----NKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--- 149 (260)
T ss_dssp TTEBHHHHHHH-----HSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEEST---
T ss_pred ccccccccccc-----ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc---
Confidence 99999999962 3458999999999999999999999 899999999999999999999999999997641
Q ss_pred CcceeeeeecCCCCCCChhhhh-cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLA-NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
..........++..|+|||++. +..++.++||||||+++|+|++|+.||......+..... .......... .
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~---~ 222 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEII----EKILKRPLPS---S 222 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHH----HHHHHTHHHH---H
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhh----hhcccccccc---c
Confidence 1222344566899999999998 888999999999999999999999999865211111111 0000000000 0
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. ........+.+++.+|++.||++||++.++++
T Consensus 223 -~~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 223 -SQ---QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -TT---SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -cc---ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 00001257788889999999999999999875
No 185
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.3e-34 Score=307.73 Aligned_cols=238 Identities=24% Similarity=0.361 Sum_probs=184.9
Q ss_pred cccccccceEEEEEECC-------------------------CcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeee
Q 003059 506 KLGAGGFGAVYRGVLAN-------------------------RTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRL 559 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l 559 (852)
+||+|+||.||+|.+.. ...|++|++... .....+|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 135889988733 2334578889999999999999999
Q ss_pred eeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC
Q 003059 560 VGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY 639 (852)
Q Consensus 560 ~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~ 639 (852)
+++|.+....++||||+++|+|+.++... ...+++..++.++.||++||+|||+ ++|+||||||+|||+++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccC
Confidence 99999999999999999999999998543 2357889999999999999999998 8999999999999997644
Q ss_pred -------ceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHH-hCCcccccccc
Q 003059 640 -------NAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIV-SGRRNFEVSQE 710 (852)
Q Consensus 640 -------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~ell-tG~~p~~~~~~ 710 (852)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.....
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred cccCccceeeecCCccccccccc-------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 3799999988643221 12346788999998875 56899999999999999995 79999865432
Q ss_pred ccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 711 TNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
..... ..... ..+.. . ....+.+++.+||+.+|++||++.+|++.|+
T Consensus 228 ~~~~~-------~~~~~-------~~~~~-~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 228 SEKER-------FYEKK-------HRLPE-P----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHH-------HHHhc-------cCCCC-C----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11100 00000 00111 1 1135678899999999999999999998773
No 186
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.3e-34 Score=312.51 Aligned_cols=201 Identities=26% Similarity=0.366 Sum_probs=162.9
Q ss_pred cccccccccceEEEEEEC---CCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeecc--CceeeEEEeecCC
Q 003059 504 KDKLGAGGFGAVYRGVLA---NRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSE--GKHRLLVYEFMKN 578 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lV~e~~~~ 578 (852)
.++||+|+||.||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 358999999999999864 45789999987433 23457889999999999999999998854 457899999985
Q ss_pred CCHHHHhhhccc----CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe----CCCCceEEeeccccc
Q 003059 579 GSLDNFLFANEE----GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL----DENYNAKVSDFGLAK 650 (852)
Q Consensus 579 gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DFGla~ 650 (852)
++|.+++..... .....+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 588888753221 112358899999999999999999998 899999999999999 466889999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQ 709 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~ 709 (852)
................+|+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 764322222223345689999999999774 58999999999999999999999997543
No 187
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.3e-34 Score=303.85 Aligned_cols=249 Identities=24% Similarity=0.364 Sum_probs=195.2
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccC------ceeeE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEG------KHRLL 571 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~------~~~~l 571 (852)
.|.+.+.||+|+||.||+|... .++.||+|.+........++..|+.++.++ +|+||+++++++... ...++
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 4566788999999999999864 578899999986666667889999999998 799999999998653 46899
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+ ++|+|+||||+||++++++.+||+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 999999999999986432 3458899999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
..... .......|+..|+|||++. ...++.++|||||||++|||++|+.||........ ......
T Consensus 161 ~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-------~~~~~~ 230 (272)
T cd06637 161 LDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-------LFLIPR 230 (272)
T ss_pred ccccc---ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-------HHHHhc
Confidence 54321 1223356889999999986 34578899999999999999999999964321110 001111
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. ...+.. ......+.+++.+|++.+|.+||++.+|++
T Consensus 231 ~~-----~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NP-----APRLKS----KKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CC-----CCCCCC----CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 10 111111 111235678889999999999999999875
No 188
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.6e-34 Score=324.24 Aligned_cols=201 Identities=23% Similarity=0.323 Sum_probs=170.1
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.+.+.++||+|+||.||+|.. .+++.||+|++.... .....+.+|++++++++|+||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 355678999999999999986 457889999987432 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~ 153 (382)
T cd05625 82 YIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (382)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence 99999999998643 247888889999999999999998 8999999999999999999999999999764321
Q ss_pred CCC--------------------------------------------cceeeeeecCCCCCCChhhhhcCCCCCCccchh
Q 003059 655 KDH--------------------------------------------RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYS 690 (852)
Q Consensus 655 ~~~--------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s 690 (852)
... .........||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 000 000011246899999999999999999999999
Q ss_pred hhHHHHHHHhCCcccccc
Q 003059 691 YGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 691 ~Gvvl~elltG~~p~~~~ 708 (852)
|||++|||++|+.||...
T Consensus 234 lGvil~elltG~~Pf~~~ 251 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred chHHHHHHHhCCCCCCCC
Confidence 999999999999999754
No 189
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.4e-34 Score=308.32 Aligned_cols=249 Identities=25% Similarity=0.323 Sum_probs=194.6
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+...+.||+|+||.||++... +++.||+|.+.... .....+.+|++++.+++|+||+.+++.+..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 445678999999999999864 58899999986432 2234578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 82 MNGGDLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred ccCccHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 99999999886432 2358999999999999999999998 89999999999999999999999999998765321
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. ......|+..|+|||.+.+..++.++||||||+++|||++|+.||.......... .......... ..
T Consensus 156 ~----~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~---~~~~~~~~~~--~~--- 223 (285)
T cd05632 156 E----SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKRE---EVDRRVLETE--EV--- 223 (285)
T ss_pred C----cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhhhccc--cc---
Confidence 1 1233468999999999999999999999999999999999999997543211100 0011111100 00
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
........+.+++..|++.||++||+ +.++++
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 ------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 01111234567888899999999999 556654
No 190
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.6e-34 Score=314.79 Aligned_cols=262 Identities=21% Similarity=0.324 Sum_probs=194.9
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.+|.+.++||+|+||.||+|... +++.||+|.++.. ......+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 35677889999999999999865 5778999998732 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++ +|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 86 LDK-DLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CCC-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 975 888887543 3357889999999999999999998 89999999999999999999999999999764322
Q ss_pred CCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------HHHHhh
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA--------YEEFEK 726 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~ 726 (852)
. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+........ +.....
T Consensus 158 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 158 T---KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred c---cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcc
Confidence 1 11223457899999999865 46889999999999999999999999755332211111000 000000
Q ss_pred CCcccccccccCCC-C-----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNVKGIVDKSLAGE-D-----VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~~~~~d~~l~~~-~-----~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
. ....+...... . ........+.+++.+|++.||.+|||+.|+++
T Consensus 235 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 235 N--DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred h--hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0 00000000000 0 00011234568899999999999999999986
No 191
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.4e-34 Score=300.76 Aligned_cols=248 Identities=24% Similarity=0.363 Sum_probs=200.8
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
.|.+.++||+|+||.||+|...+ ++.+++|.+..... .+++.+|++++++++|+||+++++++.+....++++||+++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 46677899999999999999765 78899999875433 67899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++... ...+++..+..++.|+++||.|||+ .+++||||+|+||++++++.+||+|||++........
T Consensus 83 ~~L~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 83 GSVSDIMKIT----NKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999998543 3468999999999999999999998 8999999999999999999999999999987643211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ... .....+.+
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-------~~~-----~~~~~~~~- 219 (256)
T cd06612 155 --KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-------FMI-----PNKPPPTL- 219 (256)
T ss_pred --ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-------hhh-----ccCCCCCC-
Confidence 223345788999999999999999999999999999999999999754321100 000 00000111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+......+.+++.+|++.+|.+||++.+|++
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 --SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 111122245778889999999999999999975
No 192
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.1e-34 Score=307.68 Aligned_cols=249 Identities=25% Similarity=0.325 Sum_probs=195.1
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+...+.||+|+||.||++... +++.||+|.+.... .....+..|+.++++++|+|++++++.+.+++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 455678999999999999864 57899999986322 2234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++......
T Consensus 82 ~~g~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 82 MNGGDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred cCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999999985432 2358899999999999999999998 89999999999999999999999999998765322
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. ......|+..|+|||.+.+..++.++||||||+++|||++|+.||.......... ....... ....
T Consensus 156 ~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~----~~~~~~~----~~~~- 222 (285)
T cd05630 156 Q----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE----EVERLVK----EVQE- 222 (285)
T ss_pred c----cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH----HHHhhhh----hhhh-
Confidence 1 1123468999999999999999999999999999999999999997542211000 0000000 0000
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
... ......+.+++..|++.||++||+ +.|+++
T Consensus 223 ~~~-----~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 EYS-----EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hcC-----ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 000 111234567888899999999999 778775
No 193
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.9e-34 Score=303.77 Aligned_cols=251 Identities=23% Similarity=0.303 Sum_probs=197.2
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCcc------cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE------QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
.+...+.||+|++|.||++.. .+++.|++|.+.... ...+.+.+|++++.+++||||+++++++.++...++|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 356678999999999999986 458899999886322 1235688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
+||+++++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||+++..
T Consensus 83 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 83 MEYMPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEECCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999998643 347888999999999999999998 89999999999999999999999999999765
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
..............++..|+|||.+.+..++.++||||||+++|||++|+.||........ .. .......
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~-~~~~~~~--- 224 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA------IF-KIATQPT--- 224 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH------HH-HHhccCC---
Confidence 4322111111234577899999999999999999999999999999999999964322110 00 0000000
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.. ..+......+.+++.+|++.+|.+||++.++++.
T Consensus 225 -~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 -NP-----QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -CC-----CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00 1111223356778889999999999999999864
No 194
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.6e-34 Score=303.97 Aligned_cols=251 Identities=29% Similarity=0.429 Sum_probs=191.3
Q ss_pred ccccccccceEEEEEEC----CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeec-cCceeeEEEeecC
Q 003059 505 DKLGAGGFGAVYRGVLA----NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSS-EGKHRLLVYEFMK 577 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~-~~~~~~lV~e~~~ 577 (852)
+.||+|+||.||+|.+. +...||+|++... ....+.+..|+.+++.++||||+++++++. .++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46999999999999853 2457999998632 233567889999999999999999999775 4557899999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++.... ..+++..++.++.|+++||+|||+ .+++||||||+|||+++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 81 HGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999996432 236778889999999999999998 8999999999999999999999999999986543211
Q ss_pred cc-eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhC-CccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 658 RH-RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSG-RRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 658 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
.. .......++..|+|||.+.+..++.++||||||+++|||++| ..||...... ... .....+.
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~----~~~~~~~------- 219 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DIT----VYLLQGR------- 219 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHH----HHHhcCC-------
Confidence 11 111233457789999999988999999999999999999995 5566532211 111 1111110
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
.. ..+......+.+++..|++.+|++||++.+|++.|+++.
T Consensus 220 ~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 RL---LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CC---CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00 001111235778899999999999999999999998764
No 195
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.5e-34 Score=313.83 Aligned_cols=208 Identities=27% Similarity=0.408 Sum_probs=179.8
Q ss_pred cCHHHHHHhcccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhccc-cc-----ceeeeeeee
Q 003059 491 FSYKELQRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISSTH-HL-----NLVRLVGFS 563 (852)
Q Consensus 491 ~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~-h~-----niv~l~g~~ 563 (852)
+-..|....+|.+.+.||+|.||.|.|+... .++.||||++++...-..+-..|+.+|..|+ |. |+|+++++|
T Consensus 178 ~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 178 LVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred EEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 3344555558889999999999999999964 5899999999988888888899999999997 44 899999999
Q ss_pred ccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC--Cce
Q 003059 564 SEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN--YNA 641 (852)
Q Consensus 564 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~--~~~ 641 (852)
...++.|||+|.+ ..+|.++|..+.. ..++...+..|+.||+.||.+||+ .+|||+||||+||||.+. ..+
T Consensus 258 ~fr~HlciVfELL-~~NLYellK~n~f---~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~v 330 (586)
T KOG0667|consen 258 YFRNHLCIVFELL-STNLYELLKNNKF---RGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRI 330 (586)
T ss_pred ccccceeeeehhh-hhhHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCce
Confidence 9999999999999 5699999976653 459999999999999999999998 899999999999999653 469
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccc
Q 003059 642 KVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQET 711 (852)
Q Consensus 642 kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~ 711 (852)
||+|||.+...... .-....+..|.|||++.+.+|+.+.||||||||+.||++|.+.|.+..+.
T Consensus 331 KVIDFGSSc~~~q~------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~ 394 (586)
T KOG0667|consen 331 KVIDFGSSCFESQR------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY 394 (586)
T ss_pred eEEecccccccCCc------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH
Confidence 99999999875432 11445678899999999999999999999999999999999888766543
No 196
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6e-34 Score=313.12 Aligned_cols=200 Identities=24% Similarity=0.280 Sum_probs=170.6
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||++... +++.||+|.+... ......+..|+.++..++|+||+++++++.+.+..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4667889999999999999965 5788999998632 2233457889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 82 y~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 82 YYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred CCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999643 2357888999999999999999998 8999999999999999999999999999986643
Q ss_pred CCCcceeeeeecCCCCCCChhhhhc-----CCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLAN-----LPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
... .......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...
T Consensus 155 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 155 DGT--VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred CCc--eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 211 12233569999999999875 46788999999999999999999999643
No 197
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.1e-34 Score=302.32 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=199.0
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecC--cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEG--IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~--~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
|.+.++||+|+||.||++... +++.+++|.++. .....+.+..|+.++++++|+||+++++.+.+++..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 456789999999999999864 578899998863 23345678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++.... ...++...++.++.|++.||.|||+ .+|+|+||||+||++++++.++|+|||+++......
T Consensus 82 ~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 154 (255)
T cd08219 82 GGDLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG- 154 (255)
T ss_pred CCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc-
Confidence 999999885432 3457889999999999999999998 899999999999999999999999999997664321
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
.......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... .......+...
T Consensus 155 --~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~------- 218 (255)
T cd08219 155 --AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN-------LILKVCQGSYK------- 218 (255)
T ss_pred --cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH-------HHHHHhcCCCC-------
Confidence 11233568899999999999899999999999999999999999997432110 01111111111
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+......+.+++.+||+.||++||++.+|+..
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 ---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1111122356788899999999999999999864
No 198
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.9e-34 Score=304.98 Aligned_cols=252 Identities=29% Similarity=0.461 Sum_probs=196.6
Q ss_pred ccccccccceEEEEEECC-------CcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 505 DKLGAGGFGAVYRGVLAN-------RTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.||+|+||.||+|+..+ ++.+++|.+.... ....++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998643 2579999886432 3456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccC--CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC-----ceEEeeccc
Q 003059 576 MKNGSLDNFLFANEEG--SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY-----NAKVSDFGL 648 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~-----~~kl~DFGl 648 (852)
+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++|+||||+||+++.++ .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999753221 23457899999999999999999998 8899999999999999887 899999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKG 727 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (852)
++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... . ......+
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~----~~~~~~~ 229 (269)
T cd05044 158 ARDIYKSDYY-RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE---V----LQHVTAG 229 (269)
T ss_pred cccccccccc-ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH---H----HHHHhcC
Confidence 9765432111 11122345678999999999999999999999999999998 999986432211 0 0011111
Q ss_pred CcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 728 NVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 728 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
. .. ..+......+.+++.+|++.+|.+||++.+|++.|++
T Consensus 230 ~-------~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 G-------RL---QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred C-------cc---CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 00 1111123456788999999999999999999999863
No 199
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-34 Score=298.18 Aligned_cols=265 Identities=24% Similarity=0.309 Sum_probs=193.5
Q ss_pred cccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCc-----eeeEEEeecC
Q 003059 504 KDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK-----HRLLVYEFMK 577 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~lV~e~~~ 577 (852)
.+.+|.|.||.||+|++. .+..||||+.-.... .--+|+++|+++.|||||+|+-+|.... ...+||||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 568999999999999965 468999999864333 1246899999999999999998875432 3469999997
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC-CceEEeecccccccCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN-YNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla~~~~~~~ 656 (852)
. +|.+++..... .+..++.-.+.-+..||.+||+|||+ .+|+||||||+|+|+|.+ |.+||+|||.|+.+...+
T Consensus 106 ~-tL~~~~r~~~~-~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 106 E-TLYRVIRHYTR-ANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred H-HHHHHHHHHhh-cCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 6 89888864221 23446666777899999999999999 899999999999999976 999999999999887654
Q ss_pred CcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH-----HHHHhhCCcc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA-----YEEFEKGNVK 730 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~-----~~~~~~~~~~ 730 (852)
.. ....-+.-|.|||.+.+. .|+.+.||||.|||+.||+-|++-|.+....++...+.-+ .+.+...+..
T Consensus 181 pn----iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 181 PN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred Cc----eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 33 233457789999998765 7999999999999999999999999875443332222111 1111111111
Q ss_pred --cccccccCCCC----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH--HHhcCcc
Q 003059 731 --GIVDKSLAGED----VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ--MLEGITE 780 (852)
Q Consensus 731 --~~~d~~l~~~~----~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~--~L~~~~~ 780 (852)
+.-.+.+.... .......+.++++.++++.+|.+|.++.|++. .++++++
T Consensus 257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 11112221111 11222346778899999999999999999884 4555543
No 200
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.6e-34 Score=306.61 Aligned_cols=259 Identities=25% Similarity=0.375 Sum_probs=202.0
Q ss_pred HHHhcccccccccccccceEEEEEECC----CcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCcee
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLAN----RTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~ 569 (852)
+.+.++.+.++||+|+||.||+|...+ ...|++|..... ....+.+.+|+.++++++|+||+++++++.+ ...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 344567788999999999999998643 346899988743 3345679999999999999999999998875 467
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||++
T Consensus 82 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 82 WIVMELAPLGELRSYLQVN----KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred EEEEEcCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCcee
Confidence 8999999999999999643 2358999999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCC
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
+....... .......++..|+|||.+....++.++||||||+++|||++ |+.||........ ......+.
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-------~~~~~~~~ 225 (270)
T cd05056 155 RYLEDESY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-------IGRIENGE 225 (270)
T ss_pred eecccccc--eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------HHHHHcCC
Confidence 86643211 11122234568999999988889999999999999999996 9999965432110 01111111
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
.. ..+......+.+++.+|+..+|.+||++.++++.|+++...
T Consensus 226 ~~----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 RL----------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred cC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 01111223577788999999999999999999999887643
No 201
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=294.53 Aligned_cols=260 Identities=22% Similarity=0.319 Sum_probs=199.8
Q ss_pred cccccccccceEEEEEE-CCCcEEEEEEecC---cccchHHHHHHHHHhhcccccceeeeeeeecc-----CceeeEEEe
Q 003059 504 KDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG---IEQGEKQFRMEVATISSTHHLNLVRLVGFSSE-----GKHRLLVYE 574 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~---~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~-----~~~~~lV~e 574 (852)
.+.||+|+||.|..+.. .+++.||||++.. .....++-.+|+++|+.++|+||+.+++.+.. -+..|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 57799999999999985 4689999999872 33445677899999999999999999998765 347899999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
+| .-+|...|.. ++.|+.....-++.||++||+|+|+ -+|+||||||+|+|++.+...||+|||+|+....
T Consensus 107 lM-etDL~~iik~-----~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 107 LM-ETDLHQIIKS-----QQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred HH-hhHHHHHHHc-----CccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceeeccc
Confidence 99 6688888853 3348889999999999999999999 7899999999999999999999999999998865
Q ss_pred CCCcceeeeeecCCCCCCChhhhh-cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------HHHHh
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLA-NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA--------YEEFE 725 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~ 725 (852)
. .....++..+-|.-|.|||.+. ...|+...||||.||++.||++|++.|.+.+..++-.+.... ...+.
T Consensus 178 ~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 178 F-FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred c-CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 4 3344557778899999999875 558999999999999999999999999876543322222111 11111
Q ss_pred hCCcccccccccCCCCCCHHHH-----HHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQV-----MRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~-----~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.......+...-.....+...+ ..++++..+++..||.+|+|++|.++
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111121111111112222221 35678888999999999999999885
No 202
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.9e-34 Score=314.52 Aligned_cols=240 Identities=23% Similarity=0.323 Sum_probs=190.0
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e 574 (852)
+++.+.||+|+||.||++... +++.||+|++... ....+.+..|..++..+. |++|+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 567789999999999999864 5889999998732 223456778888888875 5778889999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 82 y~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 82 YVNGGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred CCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999998543 348899999999999999999998 8999999999999999999999999999875432
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 154 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-------~~~~i~~~~~----- 218 (323)
T cd05615 154 DG---VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-------LFQSIMEHNV----- 218 (323)
T ss_pred CC---ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC-----
Confidence 11 11233558999999999999999999999999999999999999997543211 1111111111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
..+......+.+++.+|++.+|.+|++..
T Consensus 219 ------~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 219 ------SYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred ------CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 01111223567888999999999999853
No 203
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.6e-34 Score=303.18 Aligned_cols=238 Identities=25% Similarity=0.415 Sum_probs=189.6
Q ss_pred ccccccccceEEEEEECCCc-----------EEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 505 DKLGAGGFGAVYRGVLANRT-----------VVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
+.||+|+||.||+|...+.. .|++|.+.........|.+|+.++++++|+||+++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46999999999999975432 57888877444447789999999999999999999999988 7889999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC-------ceEEeec
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY-------NAKVSDF 646 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~-------~~kl~DF 646 (852)
||+++++|.+++.... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++ .+||+||
T Consensus 80 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 80 EYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 9999999999996542 258899999999999999999998 8999999999999999888 7999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcC--CCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHH
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANL--PITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEE 723 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 723 (852)
|++..... .....++..|+|||.+.+. .++.++||||||+++|||++ |..||.......... .
T Consensus 153 g~a~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-------~ 218 (259)
T cd05037 153 GIPITVLS-------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-------F 218 (259)
T ss_pred Cccccccc-------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-------H
Confidence 99986532 1223467789999999876 78999999999999999999 577775442111100 0
Q ss_pred HhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 724 FEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
.... ..+. ......+.+++.+|++.+|.+||++.+|++.|+
T Consensus 219 ~~~~-------~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 219 YQDQ-------HRLP-----MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HhcC-------CCCC-----CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 0010 011156778899999999999999999998874
No 204
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.8e-34 Score=315.99 Aligned_cols=195 Identities=27% Similarity=0.353 Sum_probs=165.3
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc------e
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK------H 568 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~------~ 568 (852)
..|.+.+.||+|+||.||++... .++.||+|++... ......+.+|+.+++.++||||+++++++.... .
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 46778899999999999999864 5889999998632 234567889999999999999999999886443 5
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 101 VYLVMELMDA-NLCQVIH-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eEEEEeCCCc-CHHHHHh-------ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 7999999965 5666663 237788899999999999999999 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
++..... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 170 a~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 170 ARTACTN----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccccccC----ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9764321 1223356899999999999999999999999999999999999999754
No 205
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.2e-34 Score=313.06 Aligned_cols=239 Identities=26% Similarity=0.287 Sum_probs=182.8
Q ss_pred ccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcc---cccceeeeeeeeccCceeeEEEeecCC
Q 003059 507 LGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISST---HHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l---~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
||+|+||.||+|... +++.||||++.... .....+..|..++.+. +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999864 58899999986321 1223445566666655 699999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+++... ..+++..+..++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-- 150 (330)
T cd05586 81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-- 150 (330)
T ss_pred ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--
Confidence 9999988543 348899999999999999999998 899999999999999999999999999987543211
Q ss_pred ceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
.......||..|+|||.+.+. .++.++|||||||++|||++|+.||....... .......+.. .+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~-------~~~~i~~~~~------~~ 216 (330)
T cd05586 151 -KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-------MYRNIAFGKV------RF 216 (330)
T ss_pred -CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH-------HHHHHHcCCC------CC
Confidence 122345689999999998765 47999999999999999999999996533210 1111111111 11
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCC----HHHHHH
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPM----MGKVVQ 773 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt----~~ev~~ 773 (852)
.... ....+.+++.+|++.||.+||+ +.++++
T Consensus 217 ~~~~----~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 217 PKNV----LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCcc----CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 1101 1234567888899999999984 555544
No 206
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.4e-34 Score=306.42 Aligned_cols=257 Identities=26% Similarity=0.400 Sum_probs=201.0
Q ss_pred HhcccccccccccccceEEEEEECC-C----cEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLAN-R----TVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~----~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
...+.+.+.||+|+||.||+|...+ + ..+|+|.+.... ....++.+|++++++++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 3456778899999999999998643 2 368999887443 344678899999999999999999999987 7889
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++|+|.+++... ...+++..++.++.||+.||+|||+ .+++||||||+|||+++++.+||+|||+++
T Consensus 85 ~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH----KDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEecCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccc
Confidence 999999999999999643 2348999999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNV 729 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (852)
........ .......++..|+|||.+....++.++||||||+++|||++ |+.||+.....+ + ......+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~----~~~~~~~~~ 229 (279)
T cd05057 158 LLDVDEKE-YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---I----PDLLEKGER 229 (279)
T ss_pred cccCcccc-eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---H----HHHHhCCCC
Confidence 76532211 11112224568999999988899999999999999999998 999997543211 1 111111100
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCcc
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITE 780 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~ 780 (852)
. ..+......+.+++.+|+..+|.+||++.++++.|+.+..
T Consensus 230 -------~---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 -------L---PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred -------C---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 1111122356678889999999999999999999988743
No 207
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.9e-34 Score=321.52 Aligned_cols=192 Identities=24% Similarity=0.267 Sum_probs=164.8
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
.|.+.++||+|+||.||++.... ++.||||... ...+.+|++++++++|+|||++++++..++..++|||++ .
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-R 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-C
Confidence 56677899999999999999754 7789999643 234678999999999999999999999999999999999 4
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++... ...+++..++.|+.||++||.|||+ ++|+||||||+||||+.++.+||+|||+++.......
T Consensus 244 ~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 244 SDLYTYLGAR----LRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 7898888543 2368999999999999999999998 8999999999999999999999999999987643211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNF 705 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~ 705 (852)
........||..|+|||++.+..++.++|||||||+||||++|..++
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 11122456999999999999999999999999999999999988654
No 208
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7.2e-34 Score=309.36 Aligned_cols=262 Identities=23% Similarity=0.282 Sum_probs=196.2
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
+.+.++||+|+||.||++... ++..+++|.+... .....++.+|++++.+++||||+++++++.+++..++||||++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~ 82 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD 82 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence 566789999999999999864 5778899988633 2234568899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++... ..+++..+..++.|+++||.|||+. .+++||||||+|||+++++.+||+|||++......
T Consensus 83 ~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 83 GGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 99999999643 3478899999999999999999972 47999999999999999999999999998755321
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC---------
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN--------- 728 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~--------- 728 (852)
......++..|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCC
Confidence 12234688999999999888899999999999999999999999864332111000000000000000
Q ss_pred --------cccccccccCCC---CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 729 --------VKGIVDKSLAGE---DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 729 --------~~~~~d~~l~~~---~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+..+...... .........+.+++.+|++.+|++||++.+|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000000 0000112347789999999999999999999875
No 209
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8.4e-34 Score=301.75 Aligned_cols=250 Identities=25% Similarity=0.372 Sum_probs=196.9
Q ss_pred ccccccccccccceEEEEEECCCcEEEEEEecCcc-------cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIE-------QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
|...+.||+|+||.||+|...+++.+|+|.+.... .....+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 45678899999999999998888999999886321 12356889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+++++|.+++... ..+++..+..++.|++.+|+|||+ .+|+|+||+|+||++++++.++|+|||++....
T Consensus 82 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 82 EFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999543 247889999999999999999998 889999999999999999999999999987653
Q ss_pred CCCC---cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 654 PKDH---RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 654 ~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
.... .........++..|+|||.+.+..++.++||||||+++|||++|+.||........ .. .... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~~--~~~~--~~ 224 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----MF--YIGA--HR 224 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----HH--Hhhh--cc
Confidence 2111 11112334588999999999998999999999999999999999999964321110 00 0000 00
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 731 GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. .+. .+......+.+++.+|++.+|.+||++.++++
T Consensus 225 ~~-~~~-----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 GL-MPR-----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CC-CCC-----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 011 11122345678889999999999999999875
No 210
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.4e-33 Score=307.35 Aligned_cols=200 Identities=25% Similarity=0.288 Sum_probs=169.7
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||++.... ++.+|+|.+... ......+..|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 45677899999999999999754 678999998632 2223458889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++.....
T Consensus 82 y~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 82 YYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred ccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999643 2358888999999999999999998 8999999999999999999999999999876533
Q ss_pred CCCcceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
.. ........||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 155 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 155 DG--TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred CC--cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 21 11223356999999999986 346789999999999999999999999743
No 211
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.9e-34 Score=305.76 Aligned_cols=257 Identities=25% Similarity=0.297 Sum_probs=201.3
Q ss_pred HhcccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
...+++.++||+|+||.||++... +++.||+|.+... ....+++.+|++++..++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 345677789999999999999964 5788999987632 3345788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++... ..+++..+..++.+++.+|.|||+. ++++||||||+||++++++.++|+|||++.....
T Consensus 84 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 84 FMDCGSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred cCCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 99999999988542 3588999999999999999999962 5799999999999999999999999999875422
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccch-----hhHHHHHHHHhhCCc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRK-----KFSLWAYEEFEKGNV 729 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~-----~l~~~~~~~~~~~~~ 729 (852)
. ......|+..|+|||.+.+..++.++|||||||++|||++|+.||......... .+..+.
T Consensus 157 ~-----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--------- 222 (284)
T cd06620 157 S-----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLL--------- 222 (284)
T ss_pred h-----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHH---------
Confidence 1 112346899999999998889999999999999999999999999754332110 011111
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
..++...... ....+....+.+++.+|++.||.+||++.||++...
T Consensus 223 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 223 QQIVQEPPPR-LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred HHHhhccCCC-CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0111100000 011112345778889999999999999999998643
No 212
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-33 Score=298.35 Aligned_cols=247 Identities=28% Similarity=0.413 Sum_probs=196.2
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHH
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLD 582 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 582 (852)
++||+|+||.||++...+++.|++|.+..... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 47999999999999987789999998874332 4567899999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceee
Q 003059 583 NFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTL 662 (852)
Q Consensus 583 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 662 (852)
+++... ...+++..++.++.+++.+|+|||+ .+++||||||+|||++.++.+||+|||+++........ ...
T Consensus 81 ~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~ 152 (251)
T cd05041 81 TFLRKK----KNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT-VSD 152 (251)
T ss_pred HHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-ecc
Confidence 999543 2357889999999999999999998 89999999999999999999999999999865421110 000
Q ss_pred eeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 663 TSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....+..|+|||.+.+..++.++||||||+++|||++ |..||........ ........ .. .
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~-------~~~~~~~~-------~~---~ 215 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT-------RERIESGY-------RM---P 215 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH-------HHHHhcCC-------CC---C
Confidence 11223567999999998899999999999999999999 8888864432110 01111100 00 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
.+......+.+++.+|++.+|.+||++.||++.|+
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 11122346778899999999999999999999886
No 213
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.5e-34 Score=319.42 Aligned_cols=262 Identities=22% Similarity=0.311 Sum_probs=193.3
Q ss_pred cccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc-----eeeEE
Q 003059 502 GFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK-----HRLLV 572 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~lV 572 (852)
.+.++||+|+||.||++.. .+++.||+|++... ....+++.+|+++++.++|+||+++++++.... ..++|
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 82 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV 82 (372)
T ss_pred cccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence 4567899999999999996 46889999998642 223467889999999999999999999998776 78999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
+||+. ++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 83 ~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 83 TELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred eeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 99996 578887743 2358899999999999999999998 89999999999999999999999999999865
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH-----HHHHhh
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA-----YEEFEK 726 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~-----~~~~~~ 726 (852)
..... .......+++.|+|||.+.+. .++.++|||||||++|||++|+.||............... ...+..
T Consensus 154 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 154 EPDES--KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ccCcc--ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 43211 122334578899999999874 4789999999999999999999999755322111100000 000000
Q ss_pred --CCcccccccccCCC-------CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 727 --GNVKGIVDKSLAGE-------DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 727 --~~~~~~~d~~l~~~-------~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
......+....... ....+....+.+++.+|++.||++||++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000000000 0001113456789999999999999999999863
No 214
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.7e-33 Score=307.96 Aligned_cols=200 Identities=24% Similarity=0.277 Sum_probs=170.1
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.+.||+|+||.||++... +++.||+|.+... ....+.+.+|+.++..++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 4667889999999999999964 5789999998632 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 82 YYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred cCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999542 2358888999999999999999998 8999999999999999999999999999876543
Q ss_pred CCCcceeeeeecCCCCCCChhhhhc-----CCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLAN-----LPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 155 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 155 DGT--VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred CCC--ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 211 11223468999999999873 45788999999999999999999999643
No 215
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=316.50 Aligned_cols=238 Identities=24% Similarity=0.323 Sum_probs=195.5
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~ 573 (852)
..+|.++||+|.||.|+++.++ +++.+|||.+++. ....+..+.|..++... +||.|++++.+|...++.|.||
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvm 448 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVM 448 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEE
Confidence 4567789999999999999975 4789999999853 33445667788887766 5999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+.||++..+.+ ...+++..+.-++..|+.||.|||+ ++|||||||.+|||||.+|.+||+|||+++...
T Consensus 449 ey~~Ggdm~~~~~------~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 449 EYVAGGDLMHHIH------TDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EecCCCcEEEEEe------cccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999444332 3458899999999999999999999 999999999999999999999999999999654
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
. .........||+.|||||++.+..|+...|-|||||+|||||.|+.||.+.++++ ++
T Consensus 520 ~---~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-------------------~F 577 (694)
T KOG0694|consen 520 G---QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-------------------VF 577 (694)
T ss_pred C---CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-------------------HH
Confidence 2 2235567899999999999999999999999999999999999999998654321 11
Q ss_pred ccccCC-CCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 003059 734 DKSLAG-EDVDIEQVMRAIQVSFWCIQEQPSQRPMM 768 (852)
Q Consensus 734 d~~l~~-~~~~~~~~~~~~~l~~~cl~~dp~~RPt~ 768 (852)
|..+.. ...+..-..+.+.++.+.+..+|++|--+
T Consensus 578 dsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 578 DSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 211111 12344445677888899999999999866
No 216
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.7e-34 Score=330.65 Aligned_cols=262 Identities=16% Similarity=0.262 Sum_probs=190.2
Q ss_pred HhcccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhccccc------ceeeeeeeeccC-cee
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISSTHHL------NLVRLVGFSSEG-KHR 569 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~------niv~l~g~~~~~-~~~ 569 (852)
...|.+.++||+|+||.||+|... .++.||||+++.......++..|++++..++|. +++++++++... .+.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 356778889999999999999864 578899999975444455667777777776554 588899988654 578
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC----------
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY---------- 639 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~---------- 639 (852)
++|||++ +++|.+++... ..+++..+..|+.||+.||+|||++ .+||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred EEEEecc-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccc
Confidence 9999988 77899888643 3588999999999999999999962 4899999999999998765
Q ss_pred ------ceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccc
Q 003059 640 ------NAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNR 713 (852)
Q Consensus 640 ------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~ 713 (852)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+.
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~ 353 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERH------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH 353 (467)
T ss_pred cCCCCceEEECCCCccccCcc------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 499999998764321 22346789999999999999999999999999999999999999976543211
Q ss_pred hhhHHHHH----HHHhh----CCcccccc------ccc---------CCC-CCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 714 KKFSLWAY----EEFEK----GNVKGIVD------KSL---------AGE-DVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 714 ~~l~~~~~----~~~~~----~~~~~~~d------~~l---------~~~-~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
..+..... ..+.. .....+.+ +.. ... .........+++++.+||+.||++||+++
T Consensus 354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~ 433 (467)
T PTZ00284 354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR 433 (467)
T ss_pred HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence 11110000 00000 00000000 000 000 00001123567899999999999999999
Q ss_pred HHHH
Q 003059 770 KVVQ 773 (852)
Q Consensus 770 ev~~ 773 (852)
|+++
T Consensus 434 e~L~ 437 (467)
T PTZ00284 434 QMTT 437 (467)
T ss_pred HHhc
Confidence 9986
No 217
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-33 Score=318.29 Aligned_cols=267 Identities=21% Similarity=0.209 Sum_probs=198.7
Q ss_pred HHHHHhcccccccccccccceEEEEEEC---CCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 494 KELQRSTKGFKDKLGAGGFGAVYRGVLA---NRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 494 ~el~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
..+....|.+.++||+|+||.||++... .++.|++|.+... ..+.+|++++++++||||+++++++......+
T Consensus 87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 3444567888999999999999999753 3578999988643 34578999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+|||++. ++|.+++.. ...+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 163 lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~ 233 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAAC 233 (392)
T ss_pred EEehhcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCcccc
Confidence 9999995 688888832 3458999999999999999999998 899999999999999999999999999997
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..................+......
T Consensus 234 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~ 312 (392)
T PHA03207 234 KLDAHPDT-PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE 312 (392)
T ss_pred ccCccccc-ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc
Confidence 65432211 12234569999999999999999999999999999999999999996543322111111111111000000
Q ss_pred -------cc------cccccCCCCCCH------HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 731 -------GI------VDKSLAGEDVDI------EQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 731 -------~~------~d~~l~~~~~~~------~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.+ ............ .....+.+++.+|++.||++||++.|++..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 313 FPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000000000 012345678889999999999999999865
No 218
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=8.5e-34 Score=304.71 Aligned_cols=249 Identities=23% Similarity=0.322 Sum_probs=194.9
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
|++.++||+|+||.||+|.... +..+++|.+.. .....+.+.+|+++++.++|+||+++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 4556789999999999999754 67889998873 334456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|..++... ...+++..+..++.|+++||.|||+ .+++||||||+|||++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-- 157 (282)
T cd06643 87 GAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-- 157 (282)
T ss_pred CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc--
Confidence 9999988542 2358999999999999999999999 899999999999999999999999999987653211
Q ss_pred ceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.......++..|+|||.+. +..++.++|||||||++|||++|+.||....... . .........
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~-----~~~~~~~~~---- 225 (282)
T cd06643 158 -QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--V-----LLKIAKSEP---- 225 (282)
T ss_pred -cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--H-----HHHHhhcCC----
Confidence 1223356889999999984 4567889999999999999999999986432110 0 001111100
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+.+. .+......+.+++.+|++.+|.+||++.++++.
T Consensus 226 -~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 226 -PTLA---QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred -CCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0110 011112456788899999999999999998754
No 219
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=9.9e-34 Score=311.01 Aligned_cols=200 Identities=20% Similarity=0.214 Sum_probs=164.9
Q ss_pred cccccccc--ccceEEEEEE-CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 503 FKDKLGAG--GFGAVYRGVL-ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 503 ~~~~lG~G--~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
+.++||+| +|++||++.. .+++.||+|++.... ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 6889999986 468899999997432 23456778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++|+|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.++++||+.........
T Consensus 82 ~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 82 AYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999996432 2348899999999999999999998 899999999999999999999999998765432111
Q ss_pred Ccce----eeeeecCCCCCCChhhhhc--CCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 657 HRHR----TLTSVRGTRGYLAPEWLAN--LPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 657 ~~~~----~~~~~~gt~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 1100 0112346778999999976 46889999999999999999999999743
No 220
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.8e-34 Score=302.17 Aligned_cols=245 Identities=26% Similarity=0.394 Sum_probs=190.9
Q ss_pred cccccccccceEEEEEEC-CCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 504 KDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
...||+|+||.||+|... +++.|++|.+... ....+.+.+|++++++++|+||+++++++..++..++|+||+++++|
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 92 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL 92 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence 357999999999999954 5778999988743 33456789999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCcccc--chhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeecccccccCCCCCc
Q 003059 582 DNFLFANEEGSGKLL--NWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~ 658 (852)
.+++.... ..+ ++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||++........
T Consensus 93 ~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~- 164 (268)
T cd06624 93 SALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP- 164 (268)
T ss_pred HHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-
Confidence 99996432 123 778888999999999999998 89999999999999986 67999999999876543211
Q ss_pred ceeeeeecCCCCCCChhhhhcCC--CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLP--ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
......++..|+|||.+.... ++.++||||||+++|||++|+.||......... .+..... . ..+
T Consensus 165 --~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~~~~~~~------~-~~~- 231 (268)
T cd06624 165 --CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---MFKVGMF------K-IHP- 231 (268)
T ss_pred --ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---Hhhhhhh------c-cCC-
Confidence 122345789999999987643 788999999999999999999999643221110 0000000 0 001
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+......+.+++.+|++.+|.+||++.+|++
T Consensus 232 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 232 ----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111122345678889999999999999999875
No 221
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-33 Score=305.77 Aligned_cols=248 Identities=21% Similarity=0.319 Sum_probs=198.7
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
..|.+.++||+|+||.||++.. .+++.||+|.+.. .....+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 4677788999999999999996 5688999999873 3334566889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.. ..+++..+..++.|++.+|.|||+ .+++||||||+|||++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred CCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 99999999843 347888999999999999999998 899999999999999999999999999998654322
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||.......... . .... -.+.
T Consensus 170 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~-~~~~-----~~~~ 234 (297)
T cd06656 170 S---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------L-IATN-----GTPE 234 (297)
T ss_pred c---CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------e-eccC-----CCCC
Confidence 1 1223457889999999999899999999999999999999999996543211100 0 0000 0000
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+ ..+......+.+++.+|++.+|++||++.+|++
T Consensus 235 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 235 L---QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred C---CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 011112234567888999999999999999987
No 222
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.5e-34 Score=326.11 Aligned_cols=266 Identities=20% Similarity=0.286 Sum_probs=191.4
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeecc--------Ccee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSE--------GKHR 569 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~--------~~~~ 569 (852)
..|.+.++||+|+||.||+|... .++.||||++.... ....+|+.++++++|+||+++++++.. ....
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 45778899999999999999964 57899999886432 234579999999999999999987632 1246
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC-ceEEeeccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY-NAKVSDFGL 648 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGl 648 (852)
++||||+++ +|.+++..... ....+++..+..++.||+.||+|||+ ++|+||||||+||||+.++ .+||+|||+
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 799999975 77777753221 24568899999999999999999998 8999999999999999665 799999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG 727 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (852)
++.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.... ..+...
T Consensus 218 a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~~i~-~~~~~p 290 (440)
T PTZ00036 218 AKNLLAGQ----RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--LVRII-QVLGTP 290 (440)
T ss_pred chhccCCC----CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHH-HHhCCC
Confidence 98764321 12234679999999998764 689999999999999999999999975432211 11100 000000
Q ss_pred ----------CcccccccccCCC----CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH--HHhcCc
Q 003059 728 ----------NVKGIVDKSLAGE----DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ--MLEGIT 779 (852)
Q Consensus 728 ----------~~~~~~d~~l~~~----~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~--~L~~~~ 779 (852)
....+.-+..... ..+......+.+++.+||+.||.+||++.|+++ .++.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 0000000000000 001111246778999999999999999999984 444443
No 223
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.8e-33 Score=298.35 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=186.9
Q ss_pred ccccccccceEEEEEECCC---cEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLANR---TVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~---~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
++||+|+||.||+|...++ ..+++|.+... ....+.|.+|+.+++.++||||+++++.|.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999975433 34667766532 234568999999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
+|.+++..... ....+.+..+..++.||++||+|||+ .+++||||||+|||++.++.+||+|||++....... ..
T Consensus 81 ~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 155 (268)
T cd05086 81 DLKSYLSQEQW-HRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED-YI 155 (268)
T ss_pred cHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcch-hh
Confidence 99999975432 13346677788999999999999998 889999999999999999999999999986432211 11
Q ss_pred eeeeeecCCCCCCChhhhhc-------CCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 660 RTLTSVRGTRGYLAPEWLAN-------LPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-------~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
.......++..|+|||++.. ..++.++||||||+++|||++ |..||....... .......+....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-------~~~~~~~~~~~~ 228 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-------VLNHVIKDQQVK 228 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHhhcccc
Confidence 11223457889999998753 245789999999999999997 567875432211 111111122222
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
+.++.+.. . ....+.+++..|+ .+|++||++++|++.|.
T Consensus 229 ~~~~~~~~-~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQLEL-P----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCccCC-C----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 33333321 1 1234455667788 57999999999998874
No 224
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.6e-34 Score=304.27 Aligned_cols=246 Identities=23% Similarity=0.350 Sum_probs=197.0
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|...+.||+|+||.||+|... +++.||+|.+... ....+.+.+|++++++++|+||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3445678999999999999864 5788999988732 234467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.. ..+++..+..++.|+++||.|||+ ++++|+||+|+||++++++.++|+|||++..+....
T Consensus 85 ~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 85 GGGSALDLLKP------GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999998842 358899999999999999999998 899999999999999999999999999997654321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ...... ..+.
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~-----~~~~ 220 (277)
T cd06642 156 ---IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL-------FLIPKN-----SPPT 220 (277)
T ss_pred ---hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH-------hhhhcC-----CCCC
Confidence 1112345788999999999989999999999999999999999998643221100 000100 0111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+ .......+.+++.+|++.+|.+||++.+|++.
T Consensus 221 ~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 221 L-----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred C-----CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1 11223457788899999999999999999973
No 225
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.3e-34 Score=304.91 Aligned_cols=239 Identities=24% Similarity=0.417 Sum_probs=187.0
Q ss_pred ccccccccceEEEEEECC--------CcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 505 DKLGAGGFGAVYRGVLAN--------RTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.||+|+||.||+|.... ..+|++|.+... ....+.+..|+.+++.++||||+++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 479999999999998532 235888887633 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc--------eEEeecc
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN--------AKVSDFG 647 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~--------~kl~DFG 647 (852)
+++|+|.+++.... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++. ++++|||
T Consensus 81 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 81 VKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 99999999996442 358899999999999999999998 89999999999999987765 5999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCC-ccccccccccchhhHHHHHHHHh
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGR-RNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
++...... ....++..|+|||++.+. .++.++||||||+++|||++|. .|+......... ...
T Consensus 154 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~--------~~~ 218 (258)
T cd05078 154 ISITVLPK-------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL--------QFY 218 (258)
T ss_pred cccccCCc-------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH--------HHH
Confidence 88754321 224578899999999864 5789999999999999999995 555432221100 000
Q ss_pred hCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
... . ..+......+.+++.+|++.+|++||++++|++.|+
T Consensus 219 ~~~------~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 219 EDR------H-----QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred Hcc------c-----cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000 0 111112245678899999999999999999999874
No 226
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.7e-33 Score=307.84 Aligned_cols=199 Identities=26% Similarity=0.377 Sum_probs=161.7
Q ss_pred ccccccccceEEEEEECC---CcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeec--cCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLAN---RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSS--EGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~--~~~~~~lV~e~~~~g 579 (852)
.+||+|+||.||+|...+ +..||+|.+.... ....+.+|++++++++||||+++++++. .+...++||||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH- 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence 579999999999999643 4789999987433 2346788999999999999999999884 35678999999864
Q ss_pred CHHHHhhhccc----CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe----CCCCceEEeecccccc
Q 003059 580 SLDNFLFANEE----GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL----DENYNAKVSDFGLAKL 651 (852)
Q Consensus 580 sL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DFGla~~ 651 (852)
+|.+++..... .....+++..+..++.||+.||.|||+ .+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 78777753211 122358899999999999999999998 899999999999999 5678999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
...............+|..|+|||.+.+. .++.++|||||||++|||+||+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 65432222223345689999999998764 5789999999999999999999999754
No 227
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-33 Score=314.27 Aligned_cols=196 Identities=25% Similarity=0.341 Sum_probs=165.9
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC------ce
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG------KH 568 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~~ 568 (852)
..|.+.+.||+|+||.||++... .++.||||++... ......+.+|+.+++.++||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 46777889999999999999864 5788999998742 23345678899999999999999999987543 35
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++||||+++ +|.+++. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 104 VYIVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred EEEEEeCCCC-CHHHHHH-------hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 7999999965 7777773 237888899999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccc
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQ 709 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~ 709 (852)
++..... .......+|..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 173 a~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 229 (364)
T cd07875 173 ARTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229 (364)
T ss_pred ccccCCC----CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence 9865321 12233568999999999999999999999999999999999999997543
No 228
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.5e-33 Score=299.79 Aligned_cols=257 Identities=25% Similarity=0.373 Sum_probs=199.8
Q ss_pred hcccccccccccccceEEEEEEC------CCcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
..+...++||+|+||.||+|... +.+.|++|.+..... ..+++.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 34556678999999999999853 346799998874333 3467999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCC----ccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeec
Q 003059 571 LVYEFMKNGSLDNFLFANEEGS----GKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDF 646 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 646 (852)
+||||+++++|.+++....... ...+++..+..++.|++.+|+|||+ .+|+||||||+|||++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999996543211 1258999999999999999999998 88999999999999999999999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHh
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
|+++....... .......++..|+|||.+.+...+.++||||||+++|||++ |..||....... . .....
T Consensus 162 ~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~----~~~~~ 232 (275)
T cd05046 162 SLSKDVYNSEY--YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---V----LNRLQ 232 (275)
T ss_pred ccccccCcccc--cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---H----HHHHH
Confidence 99875432111 11223345678999999998889999999999999999999 788885432211 0 11111
Q ss_pred hCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
.+..... ........+.+++.+|++.+|.+||++.++++.|+
T Consensus 233 ~~~~~~~---------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 AGKLELP---------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCcCCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111100 01112236778899999999999999999999885
No 229
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5e-34 Score=318.24 Aligned_cols=253 Identities=20% Similarity=0.258 Sum_probs=193.1
Q ss_pred HHHhcccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceee
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 570 (852)
+....|.+.+.||+|+||.||++... +++.+|+|.+... ....+.+.+|+.+++.++||||+++++.+.+++..+
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34457778899999999999999965 5788999998632 223455788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++|+|.+++.. ..++...+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 120 lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 120 MVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 99999999999999853 237788888999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCC----CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLP----ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
...... ........||+.|+|||++.... ++.++|||||||++|||++|+.||....... ....+..
T Consensus 191 ~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-------~~~~i~~ 261 (371)
T cd05622 191 KMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-------TYSKIMN 261 (371)
T ss_pred EcCcCC--cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-------HHHHHHc
Confidence 764321 11223456999999999997543 7899999999999999999999997543210 1111111
Q ss_pred CC-cccccccccCCCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 003059 727 GN-VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQ--RPMMGKVVQM 774 (852)
Q Consensus 727 ~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~--RPt~~ev~~~ 774 (852)
.. .... +........+.+++..|++.++.+ ||++.+|++.
T Consensus 262 ~~~~~~~--------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 262 HKNSLTF--------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCcccC--------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 10 0000 011112334556777788744433 7788888764
No 230
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.8e-33 Score=299.85 Aligned_cols=253 Identities=26% Similarity=0.402 Sum_probs=197.8
Q ss_pred ccccccccccccceEEEEEECC--CcEEEEEEecCc-----------ccchHHHHHHHHHhhc-ccccceeeeeeeeccC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN--RTVVAVKQLEGI-----------EQGEKQFRMEVATISS-THHLNLVRLVGFSSEG 566 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~-----------~~~~~~f~~E~~~l~~-l~h~niv~l~g~~~~~ 566 (852)
|.+.+.||+|+||.||+|.... ++.+|+|.+... .....++..|+.++.+ ++|+||+++++++.++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 4567889999999999999755 678999987521 1123456778888765 7999999999999999
Q ss_pred ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeec
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDF 646 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 646 (852)
+..++||||+++++|.+++..... ....+++..+++++.|++.+|.|||+. .+++|+||||+||+++.++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 999999999999999998854221 234688999999999999999999952 57999999999999999999999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
|++....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||....... . .....+
T Consensus 159 g~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~------~-~~~~~~ 227 (269)
T cd08528 159 GLAKQKQPES----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS------L-ATKIVE 227 (269)
T ss_pred cceeeccccc----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH------H-HHHHhh
Confidence 9998764322 2234568899999999999889999999999999999999999996432211 0 011111
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
...... . .......+.+++.+|++.||++||++.||.++++
T Consensus 228 ~~~~~~----~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 AVYEPL----P-----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ccCCcC----C-----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111100 0 0011245678888999999999999999999886
No 231
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-33 Score=306.22 Aligned_cols=247 Identities=20% Similarity=0.321 Sum_probs=198.3
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
+|.+.++||.|+||.||+|.. .+++.|++|.+.. .....+.+.+|+++++.++|+||+++++++...+..++|+||++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 99 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLA 99 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecC
Confidence 466778999999999999985 5688999999873 33345678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++.. ..+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 100 GGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred CCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 9999998842 248899999999999999999999 8999999999999999999999999999886543221
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
......++..|+|||.+.+..++.++|||||||++|||++|+.||......... ........ +.+
T Consensus 171 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-------~~~~~~~~-----~~~ 235 (296)
T cd06655 171 ---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-------YLIATNGT-----PEL 235 (296)
T ss_pred ---cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhcCC-----ccc
Confidence 122345888999999999888999999999999999999999999754321110 00110000 001
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
. .+......+.+++.+|+..+|.+||++.+|++
T Consensus 236 ~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 236 Q---NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred C---CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0 01111234667888999999999999999985
No 232
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-33 Score=299.11 Aligned_cols=247 Identities=32% Similarity=0.454 Sum_probs=195.9
Q ss_pred hcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
..+.+.+.||+|+||.||++.. .++.||+|.+.... ..+.+.+|+.++.+++|||++++++++.+. ..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 3567788999999999999975 56679999987432 346789999999999999999999998765 47999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++.... ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 83 GNLVNFLRTRG---RALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 99999996542 3358899999999999999999998 89999999999999999999999999998754321
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
......+..|+|||.+.+..++.++||||||+++|||++ |+.||....... .......+.. .
T Consensus 154 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~---~---- 216 (254)
T cd05083 154 ---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-------VKECVEKGYR---M---- 216 (254)
T ss_pred ---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-------HHHHHhCCCC---C----
Confidence 112234567999999998899999999999999999998 999986443211 0111111100 0
Q ss_pred CCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 738 AGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 738 ~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
..+......+.+++.+|++.+|++||++++|++.|++
T Consensus 217 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 217 ---EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0111123456788899999999999999999999864
No 233
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-33 Score=314.00 Aligned_cols=191 Identities=23% Similarity=0.307 Sum_probs=162.9
Q ss_pred HhcccccccccccccceEEEEEECC-CcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
...|.+.+.||+|+||.||+|.... ++.||+|..... ....|+.++++++|+||+++++++.+....++|+||+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 3457788999999999999999754 678999975422 2356999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
.++|.+++... ...+++..++.|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 140 -~~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 140 -SSDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred -CCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 46888888543 3468999999999999999999998 89999999999999999999999999999754321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNF 705 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~ 705 (852)
.......||..|+|||.+.+..++.++|||||||++|||+++..++
T Consensus 211 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 ---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223456899999999999999999999999999999999865544
No 234
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-33 Score=304.79 Aligned_cols=259 Identities=24% Similarity=0.312 Sum_probs=189.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcc---cccceeeeeeeecc-----Cce
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISST---HHLNLVRLVGFSSE-----GKH 568 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l---~h~niv~l~g~~~~-----~~~ 568 (852)
|.+.+.||+|+||.||+|... +++.||+|.+.... .....+.+|++++.++ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 566789999999999999865 58899999987322 2234566777777665 69999999998764 346
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++||||++ ++|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCc
Confidence 799999997 48988885432 2358899999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC-
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG- 727 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~- 727 (852)
++...... ......++..|+|||.+.+..++.++|||||||++|||++|+.||......+. +... .......
T Consensus 155 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~~-~~~~~~~~ 227 (288)
T cd07863 155 ARIYSCQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKI-FDLIGLPP 227 (288)
T ss_pred cccccCcc----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHHH-HHHhCCCC
Confidence 98664321 12234578999999999999999999999999999999999999965432111 0000 0000000
Q ss_pred --Cccc---ccccccCC-CCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 728 --NVKG---IVDKSLAG-EDVD-----IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 728 --~~~~---~~d~~l~~-~~~~-----~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.... ........ .... .+....+.+++.+|++.||++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 228 EDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 00000000 0000 112235678999999999999999999874
No 235
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.1e-33 Score=302.25 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=195.7
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeec-----cCceeeE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSS-----EGKHRLL 571 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~-----~~~~~~l 571 (852)
.+|.+.+.||+|+||.||++... .++.+++|.+........++.+|+.++.++ +|+||+++++++. .++..++
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~l 97 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWL 97 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEE
Confidence 35667789999999999999864 578899998875544556788999999999 6999999999874 4457899
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
||||+++++|.+++..... ....+++..+..++.|+++||.|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 98 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 173 (286)
T cd06638 98 VLELCNGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQ 173 (286)
T ss_pred EEeecCCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEEEccCCceee
Confidence 9999999999998864322 23468899999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhc-----CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLAN-----LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
+..... ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||....... .+ .....
T Consensus 174 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~--~~-----~~~~~ 243 (286)
T cd06638 174 LTSTRL---RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR--AL-----FKIPR 243 (286)
T ss_pred cccCCC---ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--HH-----hhccc
Confidence 543211 1223468999999998853 457889999999999999999999986432110 00 00000
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
. ..+.+.. +......+.+++.+|++.+|++||++.||++.
T Consensus 244 ~-----~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 244 N-----PPPTLHQ---PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred c-----CCCcccC---CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 0011100 01112357788999999999999999999874
No 236
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.8e-34 Score=307.98 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=196.8
Q ss_pred cccccccccccccceEEEEEEC-CCc----EEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRT----VVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
.+...+.||+|+||.||+|.+. ++. .||+|.+.... ....++.+|+.++++++||||+++++++... ..+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v 86 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLV 86 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceee
Confidence 3455678999999999999853 333 57889887432 2234688999999999999999999998754 56799
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
+||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..
T Consensus 87 ~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 87 TQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred ehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccc
Confidence 9999999999998643 2357889999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
...... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .. .....+.
T Consensus 160 ~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~----~~~~~~~--- 228 (303)
T cd05110 160 EGDEKE-YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IP----DLLEKGE--- 228 (303)
T ss_pred cCcccc-cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHCCC---
Confidence 432111 11122345678999999999999999999999999999997 899986432111 11 1111110
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccC
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEI 781 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~ 781 (852)
.. +.+......+.+++..|+..+|++||++.++++.|+.+.+.
T Consensus 229 ----~~---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 229 ----RL---PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ----CC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 00111224567888999999999999999999999887543
No 237
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.1e-33 Score=303.24 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=195.9
Q ss_pred hcccccccccccccceEEEEEECC-CcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
..|++.++||.|+||.||+|.... ++.|++|.+... ....+.+..|+++++.++|+||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 356678899999999999999754 788999998743 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|..++... ...+++..+..++.|++.+|+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 92 ~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~- 163 (292)
T cd06644 92 PGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT- 163 (292)
T ss_pred CCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccc-
Confidence 999999887543 2358899999999999999999998 89999999999999999999999999998754321
Q ss_pred CcceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
........++..|+|||.+. ...++.++|||||||++|||++|+.||....... .........
T Consensus 164 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~--- 231 (292)
T cd06644 164 --LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-------VLLKIAKSE--- 231 (292)
T ss_pred --ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-------HHHHHhcCC---
Confidence 11123456888999999884 3456889999999999999999999986432110 011111110
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.+.. ..+......+.+++.+|++.+|++||++.+|++
T Consensus 232 --~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 232 --PPTL---SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred --CccC---CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0111 111122335678889999999999999999875
No 238
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.5e-33 Score=313.25 Aligned_cols=261 Identities=21% Similarity=0.280 Sum_probs=192.5
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC------ce
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG------KH 568 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~~ 568 (852)
..|.+.+.||+|+||.||++... .++.||||++... ......+.+|+.+++.++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 46777889999999999999864 5788999998743 22345678899999999999999999987543 35
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++||||+++ +|.+++. ..+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~lv~e~~~~-~l~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 97 VYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred eEEEhhhhcc-cHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 7999999965 6777663 237888899999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHH---------H
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSL---------W 719 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~---------~ 719 (852)
++..... .......+|..|+|||.+.+..++.++|||||||++|||++|+.||............. .
T Consensus 166 ~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 166 ARTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred cccCCCc----cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9865321 12233568999999999999999999999999999999999999997543211100000 0
Q ss_pred H------HHHHhh--CCccccc-ccccCCC------CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 720 A------YEEFEK--GNVKGIV-DKSLAGE------DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 720 ~------~~~~~~--~~~~~~~-d~~l~~~------~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
. ...+.+ .....+. .+..... .........+.+++.+|++.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0 000000 0000000 0000000 0011123456789999999999999999999874
No 239
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.9e-33 Score=301.61 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=197.3
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.|.+.++||.|+||.||++... ++..+++|.+... ....+.|..|++++++++|+||+++++++.++...++||||++
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence 4667789999999999999974 5789999998733 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++... ...+++..+..++.|++.+|.|||+ .+|+|+||||+||+++.++.++|+|||++.......
T Consensus 86 ~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (280)
T cd06611 86 GGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL- 157 (280)
T ss_pred CCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc-
Confidence 99999998543 2358999999999999999999998 899999999999999999999999999987653221
Q ss_pred cceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
.......++..|+|||.+. ...++.++||||||+++|||++|+.||....... . .........
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~-----~~~~~~~~~--- 225 (280)
T cd06611 158 --QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--V-----LLKILKSEP--- 225 (280)
T ss_pred --cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--H-----HHHHhcCCC---
Confidence 1223456899999999985 3457789999999999999999999997542211 0 011111110
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+.+. .+......+.+++..|++.+|.+||++.+|++.
T Consensus 226 --~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 --PTLD---QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --CCcC---CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1110 011112356678889999999999999999863
No 240
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.5e-33 Score=298.40 Aligned_cols=248 Identities=25% Similarity=0.376 Sum_probs=195.9
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCccc----------chHHHHHHHHHhhcccccceeeeeeeeccCcee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQ----------GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----------~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~ 569 (852)
+.+.+.||+|+||.||+|... +++.+|+|.+..... ..+.+++|++++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 556788999999999999864 578899998863211 124688999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred EEEEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999543 347888999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCcc---eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 650 KLINPKDHRH---RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 650 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
+......... .......++..|+|||.+.+..++.++||||||+++|||++|+.||....... .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~ 226 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-------AIFKIGE 226 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-------HHHHHhc
Confidence 8765321111 11122457889999999998899999999999999999999999997532210 0001111
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+. .+......+.+++.+|++.+|.+||++.+|++
T Consensus 227 -----~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 -----NASPE-----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----cCCCc-----CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11111 11122345677888999999999999999875
No 241
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-35 Score=281.71 Aligned_cols=249 Identities=24% Similarity=0.363 Sum_probs=198.2
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecC---cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG---IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~---~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
..|.+.+.||+|.|+.||+... ..|+.+|+|++.. ...+.+++++|+.+-+.|+||||++|++.+.+....|||+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 3566778999999999999874 5688888888762 23366788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC---CCCceEEeecccccc
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD---ENYNAKVSDFGLAKL 651 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DFGla~~ 651 (852)
+|.|++|..-|.++ ...++..+-+.++||+++|.|+|. ++|||||+||.|+||. ..--+||+|||+|..
T Consensus 91 ~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 91 LVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred cccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 99999997777543 357788888999999999999999 8999999999999995 345589999999998
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
+.. ........||++|||||+++..+++..+|||+-||+||-||.|..||-..... ..++.+..+...-
T Consensus 163 l~~----g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-------rlye~I~~g~yd~ 231 (355)
T KOG0033|consen 163 VND----GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYEQIKAGAYDY 231 (355)
T ss_pred eCC----ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-------HHHHHHhccccCC
Confidence 862 22345678999999999999999999999999999999999999999753211 1233333322110
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
-.+.+. ...+...+++.+|+..||.+|.|+.|.++
T Consensus 232 -~~~~w~------~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 232 -PSPEWD------TVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -CCcccC------cCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 001111 11234556788899999999999988775
No 242
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.9e-33 Score=299.33 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=195.0
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.|.+.++||+|+||.||+|.. .+++.||+|.++.. ......+.+|+.++..++||||+++++.+...+..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 556678899999999999986 45888999998743 2334567889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++... ..+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++......
T Consensus 90 ~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-- 159 (267)
T cd06645 90 GGSLQDIYHVT-----GPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-- 159 (267)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--
Confidence 99999998543 348899999999999999999998 89999999999999999999999999998765421
Q ss_pred cceeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
........|+..|+|||.+. ...++.++|||||||++|||++|+.||......... ....... ...
T Consensus 160 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-------~~~~~~~---~~~ 228 (267)
T cd06645 160 -IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-------FLMTKSN---FQP 228 (267)
T ss_pred -ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-------HhhhccC---CCC
Confidence 11223456899999999974 456889999999999999999999998543221100 0000000 001
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.... .......+.+++.+|++.+|++||++.+|++
T Consensus 229 ~~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 229 PKLKD---KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred Ccccc---cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11100 0011234678889999999999999999875
No 243
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.3e-33 Score=303.74 Aligned_cols=264 Identities=22% Similarity=0.294 Sum_probs=193.6
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.++||+|+||.||+|+.. +++.||+|++... ......+.+|+.++.+++||||+++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 456788999999999999964 5889999998632 223467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
+ ++|.+++..... ...+++..+..++.||++||+|||+ .+|+||||||+|||+++++.+||+|||++.......
T Consensus 82 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 82 S-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred C-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 7 689888854322 3568999999999999999999998 899999999999999999999999999997653221
Q ss_pred CcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH-----HHHhh----
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY-----EEFEK---- 726 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-----~~~~~---- 726 (852)
.......+++.|+|||.+.+. .++.++||||||+++|||++|+.||................ ..+..
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 156 ---RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred ---ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence 112234568899999988754 57889999999999999999999997543211100000000 00000
Q ss_pred CCcccccccccCCC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNVKGIVDKSLAGE--DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~~~~~d~~l~~~--~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
......+....... ........++.+++.+|++.||.+||++.+|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000000 000001234568899999999999999999875
No 244
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.7e-33 Score=298.18 Aligned_cols=246 Identities=23% Similarity=0.349 Sum_probs=198.6
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|...++||.|+||.||+|... .+..||+|.+... ......+.+|+++++++.|+||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3455678999999999999965 5788999988733 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.. ..+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 85 GGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 99999999842 247888899999999999999998 899999999999999999999999999997664322
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ....... .+
T Consensus 156 ~---~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~~-----~~- 219 (277)
T cd06640 156 I---KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-------FLIPKNN-----PP- 219 (277)
T ss_pred c---ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-------hhhhcCC-----CC-
Confidence 1 122345788999999999889999999999999999999999999643221100 0000000 01
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.........+.+++.+|++.+|++||++.++++.
T Consensus 220 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 ----TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ----CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1222344567789999999999999999999764
No 245
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.4e-33 Score=299.79 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=198.3
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|.+.+.||.|+||.||+|... +++.|++|.+... ......+.+|+++++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 3556788999999999999965 5789999998733 334467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++... .+++..+..++.|++.+|.|||+ .+++||||+|+||++++++.++|+|||+++.+....
T Consensus 82 ~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 82 GGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred CCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999998532 68999999999999999999998 889999999999999999999999999998765421
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||....... ........ ..+.
T Consensus 153 ---~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-------~~~~~~~~-----~~~~ 217 (274)
T cd06609 153 ---SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-------VLFLIPKN-----NPPS 217 (274)
T ss_pred ---cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-------HHHHhhhc-----CCCC
Confidence 12233457889999999999899999999999999999999999996443110 00011111 1111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.. . .....+.+++.+|+..+|++||+++++++
T Consensus 218 ~~~-~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 218 LEG-N---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred Ccc-c---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111 0 02235677888999999999999999986
No 246
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.9e-33 Score=296.04 Aligned_cols=247 Identities=23% Similarity=0.345 Sum_probs=197.1
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeecc-CceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSE-GKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lV~e~ 575 (852)
|.+.+.||+|++|.||++... +++.|++|++... ....+.+..|++++++++|+|++++++.+.. ....++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 567889999999999999964 4778999998632 2334568899999999999999999998764 4467999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++.... ...+++.+++.++.|++.+|+|||+ .+++||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 82 CEGGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999996432 3458999999999999999999998 89999999999999999999999999999876432
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. .......+++.|+|||.+.+..++.++||||||++++||++|+.||...... .... ....+...
T Consensus 156 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~------~~~~-~~~~~~~~----- 220 (257)
T cd08223 156 C---DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN------SLVY-RIIEGKLP----- 220 (257)
T ss_pred C---CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHH-HHHhcCCC-----
Confidence 1 1223455889999999999999999999999999999999999999743211 1111 11111110
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+......+.+++.+|++.+|++||++.++++
T Consensus 221 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 -----PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -----CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111223346778899999999999999999875
No 247
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.5e-33 Score=313.73 Aligned_cols=201 Identities=24% Similarity=0.334 Sum_probs=171.3
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+++.+.||+|+||.||++... +++.||+|++... ......+..|+.++.+++|+||+++++.+.+++..++||||
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~ 82 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF 82 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence 556789999999999999865 5789999998732 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||||+.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 83 LPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred CCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999643 348899999999999999999998 89999999999999999999999999998754321
Q ss_pred CCc--------------------------------ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCc
Q 003059 656 DHR--------------------------------HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRR 703 (852)
Q Consensus 656 ~~~--------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~ 703 (852)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 000 000113468999999999999999999999999999999999999
Q ss_pred cccccc
Q 003059 704 NFEVSQ 709 (852)
Q Consensus 704 p~~~~~ 709 (852)
||....
T Consensus 235 Pf~~~~ 240 (360)
T cd05627 235 PFCSET 240 (360)
T ss_pred CCCCCC
Confidence 997543
No 248
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.5e-33 Score=295.32 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=199.8
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||.|+||.||.+.. .+++.+++|.+... .....++.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 56778999999999999885 45788999988632 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..+..++.|++++|+|||+ .+++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 82 NGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred CCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 9999999996442 3458899999999999999999998 789999999999999999999999999998764322
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ......++..|+|||.+.+..++.++||||||+++|||++|+.||+...... .......+....
T Consensus 156 ~---~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-------~~~~~~~~~~~~----- 220 (256)
T cd08221 156 S---MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-------LVVKIVQGNYTP----- 220 (256)
T ss_pred c---cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHcCCCCC-----
Confidence 1 2234568899999999998889999999999999999999999996532211 011111111111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
........+.+++.+|++.+|.+||++.++++.
T Consensus 221 -----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 -----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -----CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 111123456788889999999999999999875
No 249
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.4e-33 Score=306.14 Aligned_cols=261 Identities=23% Similarity=0.320 Sum_probs=194.3
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
..|.+.++||+|+||.||+|... +++.||+|.+... ......+.+|+.++++++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 35677889999999999999865 5788999998732 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
++ ++|.+++... ...+++..+..++.||++||+|||+ .+|+|+||||+|||+++++.+||+|||++......
T Consensus 86 ~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 86 LD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 97 5899888543 2357889999999999999999998 89999999999999999999999999999764321
Q ss_pred CCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh---hCCccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE---KGNVKG 731 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~ 731 (852)
. .......+++.|+|||.+.+. .++.++||||||+++|||++|+.||......+... ....... ......
T Consensus 158 ~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 158 T---KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLH---FIFRILGTPTEETWPG 231 (301)
T ss_pred C---CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCChhhchh
Confidence 1 112234568899999998754 57889999999999999999999997543221110 0000000 000000
Q ss_pred ccc------cccCCC-C-----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVD------KSLAGE-D-----VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d------~~l~~~-~-----~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
++. ...... . ........+.+++.+|++.||.+|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 000000 0 00011224568899999999999999999986
No 250
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3e-33 Score=301.86 Aligned_cols=252 Identities=22% Similarity=0.326 Sum_probs=195.6
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccC-----ceeeEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEG-----KHRLLV 572 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~-----~~~~lV 572 (852)
.|.+.+.||+|+||.||++.. .+++.+|+|.+........++.+|+.++.++ +|||++++++++... +..++|
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence 456678999999999999996 4688999999875555556788999999998 899999999998653 368999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++..... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++..
T Consensus 103 ~ey~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~ 178 (291)
T cd06639 103 LELCNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQL 178 (291)
T ss_pred EEECCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence 999999999998864321 24468899999999999999999998 89999999999999999999999999998865
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcC-----CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANL-----PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG 727 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (852)
..... ......++..|+|||.+... .++.++|||||||++|||++|+.||....... .+ ......
T Consensus 179 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~~-----~~~~~~ 248 (291)
T cd06639 179 TSTRL---RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--TL-----FKIPRN 248 (291)
T ss_pred ccccc---cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--HH-----HHHhcC
Confidence 43211 11234578899999998644 36889999999999999999999996432211 00 111111
Q ss_pred CcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 728 NVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 728 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+. .+.+....+.+++.+|++.+|++||++.++++
T Consensus 249 ~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 249 PPPTLL--------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCCCC--------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111 11122345778899999999999999999986
No 251
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.3e-33 Score=297.40 Aligned_cols=248 Identities=24% Similarity=0.330 Sum_probs=188.5
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc------cchHHHHHHHHHhhcccccceeeeeeeecc--CceeeE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE------QGEKQFRMEVATISSTHHLNLVRLVGFSSE--GKHRLL 571 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l 571 (852)
|...+.||+|+||.||++... .++.|++|++.... .....+.+|+.++++++|+||+++++++.+ +...++
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence 455688999999999999864 58899999886321 123468889999999999999999998865 357789
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
++||+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 84 FMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 99999999999999543 247889999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
+..............++..|+|||.+.+..++.++||||||+++|||++|+.||....... . .. .... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-----~-~~-~~~~----~ 224 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-----A-IF-KIAT----Q 224 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-----H-HH-HHhc----C
Confidence 5432111112223458889999999999899999999999999999999999996432110 0 00 0000 0
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+.+ +. .....++.++.|+..+|++||+++||++
T Consensus 225 ~~~~~~-----~~-~~~~~~~~li~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 225 PTNPQL-----PS-HISEHARDFLGCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCCCC-----ch-hcCHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 001111 11 1112223334688899999999999975
No 252
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-33 Score=303.78 Aligned_cols=251 Identities=27% Similarity=0.358 Sum_probs=206.8
Q ss_pred HHhcccccccccccccceEEEEEECC-CcEEEEEEecCccc----chHHHHHHHHHhhccc-ccceeeeeeeeccCceee
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQ----GEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~----~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~ 570 (852)
....|.+.+.||+|.||.||+++.+. ++.+|+|.+.+... ....+.+|+.+|+++. |||||.+.+.+.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 44567888999999999999999765 89999999974332 3468999999999998 999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC----CCceEEeec
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE----NYNAKVSDF 646 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~----~~~~kl~DF 646 (852)
+|||++.||.|.+.+... .+++.....++.||+.+++|||+ .+|+||||||+|+|+.. ++.+|++||
T Consensus 113 lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DF 183 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDF 183 (382)
T ss_pred EEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeC
Confidence 999999999999999654 28999999999999999999999 89999999999999953 357999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
|++..... ........||+.|+|||++....++...||||+||++|.|++|..||......... ..+..
T Consensus 184 Gla~~~~~----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~-------~~i~~ 252 (382)
T KOG0032|consen 184 GLAKFIKP----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF-------LAILR 252 (382)
T ss_pred CCceEccC----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH-------HHHHc
Confidence 99998754 34567789999999999999999999999999999999999999999865432211 12222
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
++. +.-++.. ......+-+++..++..||.+|+++.++++.
T Consensus 253 ~~~-~f~~~~w------~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 253 GDF-DFTSEPW------DDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCC-CCCCCCc------cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 222 1111111 1123455677888999999999999999984
No 253
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.7e-33 Score=296.09 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=198.3
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.++||+|+||.||++.. .+++.|++|++... ....+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 56778999999999999985 45789999998632 233467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.... ...+++..++.++.|++.||+|||+ .+++|+||+|+|||++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 82 EGGDLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999886432 2357889999999999999999998 899999999999999999999999999998654321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ......++..|+|||.+.+..++.++||||||++++||++|+.||...... ... .....+...
T Consensus 156 ~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~-~~~~~~~~~------ 219 (256)
T cd08218 156 E---LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLV-LKIIRGSYP------ 219 (256)
T ss_pred h---hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHH-HHHhcCCCC------
Confidence 1 112345788999999999989999999999999999999999999643211 111 111111110
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+......+.+++.+|++.+|.+||++.+|++
T Consensus 220 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 220 ----PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ----CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111122345778889999999999999999986
No 254
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.5e-33 Score=294.13 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=200.1
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
..|.+.+.||+|+||.||++... +++.+++|.+... ....+.+.+|++++++++||||+++++++.++...+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 35677889999999999999864 5778999998733 335578899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++... ...++...+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 83 GGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 999999998643 2358899999999999999999998 899999999999999999999999999987654321
Q ss_pred CcceeeeeecCCCCCCChhhhhcC---CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANL---PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.......++..|+|||.+.+. .++.++||||||+++|||++|+.||......... ....... ..
T Consensus 156 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-------~~~~~~~---~~ 222 (262)
T cd06613 156 ---AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-------FLISKSN---FP 222 (262)
T ss_pred ---hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhcc---CC
Confidence 112234578899999999877 8899999999999999999999999654321110 0011100 00
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+ .........+.+++.+|++.+|.+||++.+|+.
T Consensus 223 ~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 PPKL---KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred Cccc---cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0111 112223456788999999999999999999875
No 255
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=5.3e-33 Score=295.65 Aligned_cols=248 Identities=22% Similarity=0.278 Sum_probs=190.9
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc------cchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE------QGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLL 571 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l 571 (852)
+.+.+.||+|+||.||+|... +++.|++|.+.... ...+.+.+|+.++.+++|+||+++++++.+. ...++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 556789999999999999964 48899999875221 1235678899999999999999999988763 46789
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
||||+++++|.+++... ..+++..+++++.|++.+|+|||+ .+++|+||||+||+++.++.++|+|||+++.
T Consensus 84 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 84 FMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 99999999999998533 247888899999999999999998 8899999999999999999999999999986
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
...............++..|+|||.+.+..++.++||||||+++|||++|+.||....... . .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~-----~~~~~~~---- 224 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--A-----IFKIATQ---- 224 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH--H-----HHHHhcC----
Confidence 5432211112233458889999999998889999999999999999999999996432110 0 0011000
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+ ..+......+.+++.+|+. +|++||++++|++
T Consensus 225 ~~~~-----~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 225 PTNP-----VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CCCC-----CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0011 1222333455667777874 8999999999875
No 256
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.3e-33 Score=293.85 Aligned_cols=249 Identities=31% Similarity=0.503 Sum_probs=198.3
Q ss_pred cccccccccccceEEEEEECC-----CcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 502 GFKDKLGAGGFGAVYRGVLAN-----RTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.+.+.||.|+||.||++...+ +..||+|.+..... ..+.+..|+.++.+++|+||+++++++.+.+..++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 356789999999999999754 37899999974443 46789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++..... ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||+++....
T Consensus 82 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 82 YMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred ccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999964321 128999999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
...... ....++..|+|||.+.+..++.++||||||++++||++ |+.||...... .. ..........
T Consensus 156 ~~~~~~--~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~----~~~~~~~~~~--- 223 (258)
T smart00219 156 DDYYKK--KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EV----LEYLKKGYRL--- 223 (258)
T ss_pred cccccc--ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHhcCCCC---
Confidence 322111 12336789999999988889999999999999999998 78888643211 10 1111111110
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
.........+.+++.+|++.+|++||++.++++.|
T Consensus 224 -------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 -------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 01111234577788999999999999999998764
No 257
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.4e-33 Score=299.56 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=196.4
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.|.+.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++|+||+++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 4667789999999999999975 58899999886322 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
++++.|..++.. ...+++..++.++.|++.+|+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 82 CDHTVLNELEKN-----PRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred cCccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988887643 2348999999999999999999999 89999999999999999999999999999876542
Q ss_pred CCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH--------HHHhh
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY--------EEFEK 726 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~--------~~~~~ 726 (852)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+......-.. ..+..
T Consensus 154 ~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07847 154 GD---DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST 230 (286)
T ss_pred cc---cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc
Confidence 21 1123457788999999876 467899999999999999999999997543221111000000 00000
Q ss_pred CC-cccccccccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GN-VKGIVDKSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~-~~~~~d~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. ......+.... ..+.+ ....+.+++.+|++.+|++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 231 NQFFKGLSIPEPET-REPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccccCCCccc-ccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 00000000000 11111 1245778999999999999999999875
No 258
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.9e-33 Score=297.91 Aligned_cols=256 Identities=29% Similarity=0.432 Sum_probs=196.6
Q ss_pred cccccccccccceEEEEEEC----CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc------e
Q 003059 502 GFKDKLGAGGFGAVYRGVLA----NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK------H 568 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~------~ 568 (852)
.+.+.||+|+||.||+|.+. .++.||||++... ....+++.+|++++++++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45678999999999999853 3578999998743 234567889999999999999999999876532 3
Q ss_pred eeEEEeecCCCCHHHHhhhccc-CCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEE-GSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
.++++||+++|+|.+++..... .....+++...+.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECccc
Confidence 4789999999999998864321 122357889999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHHHhh
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
+++....... ........++..|++||.+....++.++||||||+++|||++ |+.||....... + ......
T Consensus 159 ~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~----~~~~~~ 230 (273)
T cd05074 159 LSKKIYSGDY-YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---I----YNYLIK 230 (273)
T ss_pred ccccccCCcc-eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---H----HHHHHc
Confidence 9986543211 111122335678999999998899999999999999999999 888886432211 1 111111
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
... + ..+......+.+++.+|++.+|.+||++.++++.|+++
T Consensus 231 ~~~-------~---~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNR-------L---KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCc-------C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 110 0 01112234678899999999999999999999999865
No 259
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-33 Score=291.68 Aligned_cols=257 Identities=26% Similarity=0.316 Sum_probs=205.2
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
..++.++||.|.-|+||++.+++ +...|+|++.+. .....+.+.|-+||+.+.||-++.|++.+..++..|||||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 34456789999999999999876 588999999743 3334567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
||+||+|..+++++. ++.++...+.-++.+++-||+|||. .|||+|||||+||||.++|++.|+||.|+.....
T Consensus 158 yCpGGdL~~LrqkQp---~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQP---GKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred cCCCccHHHHHhhCC---CCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 999999999886543 6679999999999999999999999 8999999999999999999999999998753310
Q ss_pred C--------------------------------CCc---------------------ceeeeeecCCCCCCChhhhhcCC
Q 003059 655 K--------------------------------DHR---------------------HRTLTSVRGTRGYLAPEWLANLP 681 (852)
Q Consensus 655 ~--------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~ 681 (852)
. ... .......+||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 000 00112357999999999999999
Q ss_pred CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccC
Q 003059 682 ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQ 761 (852)
Q Consensus 682 ~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~d 761 (852)
.+.++|.|+|||++||||.|..||.+..... .+..++-+.+.- +..++....+.++|...|.+|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~---------------Tl~NIv~~~l~F-p~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE---------------TLRNIVGQPLKF-PEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchh---------------hHHHHhcCCCcC-CCCCcchhHHHHHHHHHhccC
Confidence 9999999999999999999999998765432 122233333322 122244456778899999999
Q ss_pred CCCCCC----HHHHHH--HHhcC
Q 003059 762 PSQRPM----MGKVVQ--MLEGI 778 (852)
Q Consensus 762 p~~RPt----~~ev~~--~L~~~ 778 (852)
|.+|-. ++||.+ .++++
T Consensus 376 P~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred hhhhhccccchHHhhcCccccCC
Confidence 999988 777775 34444
No 260
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-34 Score=303.58 Aligned_cols=238 Identities=28% Similarity=0.359 Sum_probs=194.4
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecC-ccc---chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEG-IEQ---GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~-~~~---~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.||.|.||.||-+.. .+...||||++.- .++ .-.++..|+..|.+++|||++.+-|+|..+...||||||| -|
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lG 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LG 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hc
Confidence 4699999999999995 5678999999973 222 2357889999999999999999999999999999999999 56
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
|-.|+|.-. .+++....+..|..+.+.||+|||+ ++.||||||+.||||.+.|.+||+|||.|..+.+
T Consensus 111 SAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 111 SASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred cHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 888888543 5678899999999999999999999 8999999999999999999999999999987754
Q ss_pred eeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 660 RTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
...++||+.|||||++. .+.|+-|+||||||++..||...++|+-..+..... -.+..+ -.+.
T Consensus 179 --AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL-------YHIAQN-----esPt 244 (948)
T KOG0577|consen 179 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-------YHIAQN-----ESPT 244 (948)
T ss_pred --hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH-------HHHHhc-----CCCC
Confidence 34678999999999985 568999999999999999999999997544321111 111111 1112
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+. ..+....+..++-.|++.-|.+|||.++++.
T Consensus 245 Lq----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 245 LQ----SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CC----CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 21 3355566778888899999999999887664
No 261
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.4e-33 Score=300.65 Aligned_cols=251 Identities=24% Similarity=0.380 Sum_probs=196.5
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.+++.+.||+|+||.||++... .++.||+|.+... .....++.+|++++++++|+||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 3567789999999999999975 6889999988732 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|..++.... ....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++..+...
T Consensus 82 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 82 DAGSLDKLYAGGV--ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred CCCCHHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 9999999986432 133689999999999999999999962 58999999999999999999999999998765321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCC------CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLP------ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~------~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
......++..|+|||.+.+.. ++.++|||||||++|||++|+.||........ . ........+..
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~--~~~~~~~~~~~- 227 (286)
T cd06622 157 ----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI--F--AQLSAIVDGDP- 227 (286)
T ss_pred ----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH--H--HHHHHHhhcCC-
Confidence 112345788999999986543 47899999999999999999999964321110 0 00011111110
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 731 GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+ ..+......+.+++.+|++.+|.+||++.++++
T Consensus 228 ----~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 228 ----P-----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ----C-----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0 112223455678889999999999999999986
No 262
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.8e-33 Score=294.33 Aligned_cols=251 Identities=26% Similarity=0.434 Sum_probs=197.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCccc---chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQ---GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|...+.||+|+||.||+|... +++.|++|.+..... ..+++..|++++++++|+||+++++++.+.+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 566789999999999999864 678999999874433 4578899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++... ..+++..+..++.|+++||.|||+ .+|+|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 82 SGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999998542 347889999999999999999998 899999999999999999999999999998765432
Q ss_pred Cccee-eeeecCCCCCCChhhhhcCC---CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 657 HRHRT-LTSVRGTRGYLAPEWLANLP---ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 657 ~~~~~-~~~~~gt~~y~aPE~~~~~~---~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
..... .....++..|+|||.+.+.. .+.++||||||+++|||++|+.||....... .. ... ...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~--~~---~~~-~~~~----- 222 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF--QI---MFH-VGAG----- 222 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH--HH---HHH-HhcC-----
Confidence 22111 22345788999999998766 8899999999999999999999996432110 00 000 0000
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+.+. ........+.+++.+|++.+|.+||++.+++.
T Consensus 223 ~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 223 HKPPIP---DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCCC---cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 011111 11111345568889999999999999999874
No 263
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.1e-32 Score=291.58 Aligned_cols=245 Identities=27% Similarity=0.390 Sum_probs=196.0
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc------cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE------QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
|...+.||+|+||.||+|... +++.|++|.+.... ...+.+.+|+.++++++|+||+++++++..+...++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 455678999999999999976 68899999886322 23467899999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+++++|.+++... ..+++..+..++.|+++||+|||+ .+++|+||+|+||+++.++.+||+|||++....
T Consensus 82 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 82 ELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999543 247899999999999999999998 899999999999999999999999999988654
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCC-CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLP-ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
... ......++..|+|||.+.... ++.++|+||||+++|||++|+.||....... . ...........
T Consensus 154 ~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~----~~~~~~~~~~~-- 221 (258)
T cd06632 154 EFS----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--A----VFKIGRSKELP-- 221 (258)
T ss_pred ccc----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--H----HHHHHhcccCC--
Confidence 322 223455888999999997766 8999999999999999999999996543110 0 00000000010
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+......+.+++.+|++.+|.+||++.++++
T Consensus 222 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 --------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 111112345667888999999999999999875
No 264
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=7.2e-33 Score=295.78 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=198.1
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccCc------eee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGK------HRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~------~~~ 570 (852)
..|.+.+.||+|+||.||+|... +++.+++|.+.......+++.+|+.+++++ +|+||+++++++.+.. ..+
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 45677889999999999999975 578899999986666667899999999999 7999999999986544 589
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++++|.+++..... ....+++..+..++.|+++||.|||+ .+++|+||+|+||++++++.+||+|||++.
T Consensus 86 lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 99999999999999864321 23468899999999999999999998 899999999999999999999999999987
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhc-----CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLAN-----LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
...... .......++..|+|||.+.. ..++.++||||||++++||++|+.||....... . .....
T Consensus 162 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~-----~~~~~ 231 (275)
T cd06608 162 QLDSTL---GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--A-----LFKIP 231 (275)
T ss_pred ecccch---hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--H-----HHHhh
Confidence 653211 11233458889999998753 346789999999999999999999996432110 0 01111
Q ss_pred hCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
... .+.+ ..+......+.+++.+|+..||++||++.+|++
T Consensus 232 ~~~-----~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 RNP-----PPTL---KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ccC-----CCCC---CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 110 1111 111223456778999999999999999999975
No 265
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.5e-33 Score=297.80 Aligned_cols=250 Identities=23% Similarity=0.359 Sum_probs=194.7
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeecc------Cceee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSE------GKHRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~------~~~~~ 570 (852)
..|.+.+.||+|+||.||+|.. .+++.+|+|.+........++..|+.++.++ +|+||+++++++.. ....+
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 4566778999999999999996 4578899999876555567789999999998 69999999999853 45789
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++|+|.+++.... ...+++..+..++.||++||+|||+ .+|+|+||||+||++++++.++|+|||++.
T Consensus 96 iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred EEEEeCCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 9999999999999986432 3357888889999999999999998 899999999999999999999999999987
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
...... .......|+..|+|||.+. ...++.++||||||+++|||++|+.||......... ....
T Consensus 170 ~~~~~~---~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-------~~~~ 239 (282)
T cd06636 170 QLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-------FLIP 239 (282)
T ss_pred hhhccc---cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-------hhHh
Confidence 653211 1122355888999999885 346788999999999999999999999643211100 0000
Q ss_pred hCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
. .....+. .......+.+++.+||+.||.+||++.||++
T Consensus 240 ~-----~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 240 R-----NPPPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred h-----CCCCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 0011111 0112245778899999999999999999874
No 266
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.1e-32 Score=293.11 Aligned_cols=257 Identities=23% Similarity=0.356 Sum_probs=200.9
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|.+.+.||.|+||.||+|.. .++..+++|++... ....+.+.+|+++++.++|+||+++++.+...+..++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 466788999999999999995 45788999998632 234578899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++..... ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++..+....
T Consensus 82 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 82 SGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred CCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 99999999965322 2458899999999999999999998 899999999999999999999999999998765432
Q ss_pred Ccc-eeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 657 HRH-RTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 657 ~~~-~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
... .......++..|+|||.+... .++.++||||||+++|||++|+.||....... .+ ...... ..
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~-----~~~~~~-----~~ 224 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VL-----MLTLQN-----DP 224 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hH-----HHHhcC-----CC
Confidence 221 122334588999999999877 78999999999999999999999997543211 00 000110 01
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+............+.+++..|++.||++||++.+|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 225 PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111110000122345678888999999999999999875
No 267
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.4e-33 Score=302.33 Aligned_cols=243 Identities=22% Similarity=0.337 Sum_probs=193.8
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHH
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLD 582 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 582 (852)
.+||+|+||.||++... +++.|++|.+.. .....+.+.+|+.++..++||||+++++++..++..++|+||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 47999999999999864 688999999863 3344567889999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceee
Q 003059 583 NFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTL 662 (852)
Q Consensus 583 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 662 (852)
.++.. ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....... ...
T Consensus 107 ~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---~~~ 174 (297)
T cd06659 107 DIVSQ------TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---PKR 174 (297)
T ss_pred HHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc---ccc
Confidence 98742 348899999999999999999998 899999999999999999999999999987654321 112
Q ss_pred eeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCC
Q 003059 663 TSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDV 742 (852)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (852)
....++..|+|||.+.+..++.++||||||+++|||++|+.||........ + ..+.... ......
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~-----~~~~~~~-----~~~~~~--- 239 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--M-----KRLRDSP-----PPKLKN--- 239 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--H-----HHHhccC-----CCCccc---
Confidence 335688999999999998999999999999999999999999964322110 0 1111110 000000
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 743 DIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 743 ~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.......+.+++.+|++.+|++||++.+|++.
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00112346678889999999999999999974
No 268
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-32 Score=294.37 Aligned_cols=258 Identities=25% Similarity=0.317 Sum_probs=198.0
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeecc--CceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSE--GKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lV~e~ 575 (852)
+.+.++||.|++|.||++... +++.+|+|.+.... ....++.+|++++++++||||+++++++.+ .+..++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 456789999999999999974 57889999987432 345678999999999999999999998865 3478999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++..... ....++...+..++.||+.||+|||+ .+++|+||+|+||++++++.++|+|||++......
T Consensus 83 ~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 83 CEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred cCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 999999998754322 24458889999999999999999998 89999999999999999999999999998765321
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. .....++..|+|||.+.+..++.++||||||+++|||++|+.||+........... . ...........+.+.
T Consensus 159 ~-----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 231 (287)
T cd06621 159 L-----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIE-L-LSYIVNMPNPELKDE 231 (287)
T ss_pred c-----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHH-H-HHHHhcCCchhhccC
Confidence 1 12345788999999999999999999999999999999999999755321111111 0 011111111111100
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
. .........+.+++.+|++.+|.+||++.||++
T Consensus 232 -~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 -P---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -C---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0 001122356789999999999999999999987
No 269
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7.1e-33 Score=293.95 Aligned_cols=253 Identities=23% Similarity=0.377 Sum_probs=199.1
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeecc--CceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSE--GKHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lV~e 574 (852)
|.+.+.||.|+||.||++.. .+++.+++|.+... ....+++..|++++++++|+||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 55678899999999999985 45788999998632 2334568899999999999999999997753 456799999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhcccc--CCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEEC--RDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|+++++|.+++..... ....+++..++.++.||+.||+|||... ..+++|+||||+||++++++.+||+|||++...
T Consensus 82 ~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 82 YCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999999965322 2456899999999999999999999321 278999999999999999999999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
..... ......++..|+|||.+....++.++||||||+++++|++|+.||...... . .......+..
T Consensus 161 ~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~----~~~~~~~~~~--- 227 (265)
T cd08217 161 GHDSS---FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---Q----LASKIKEGKF--- 227 (265)
T ss_pred cCCcc---cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---H----HHHHHhcCCC---
Confidence 54321 123346899999999999888999999999999999999999999754311 1 1111111111
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+ ..+......+.+++.+|++.+|.+||++.+|++.
T Consensus 228 --~-----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 --R-----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --C-----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 1222233567788999999999999999999864
No 270
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.8e-33 Score=299.94 Aligned_cols=260 Identities=20% Similarity=0.288 Sum_probs=191.9
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|+||.||+|... +++.|++|++... ......+.+|++++++++|+||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 566788999999999999964 5888999998632 222356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
+ ++|.+++... ...+++..++.++.||++||.|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 82 D-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred C-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 6 5888877532 2358999999999999999999998 899999999999999999999999999998654321
Q ss_pred CcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC------Cc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG------NV 729 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~------~~ 729 (852)
.......++..|+|||.+.+. .++.++||||||+++|||++|..|+....... ..+. ......... ..
T Consensus 154 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 154 ---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-DQLK-RIFRLLGTPTEESWPGV 228 (284)
T ss_pred ---CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH-HHHH-HHHHHhCCCChHHhHHh
Confidence 112234578899999998765 46899999999999999999998864322111 1100 000000000 00
Q ss_pred cccccc----ccCC----CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 730 KGIVDK----SLAG----EDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 730 ~~~~d~----~l~~----~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+. .... ..........+.+++.+|++.||.+|||++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000 0000 0000112245678899999999999999999875
No 271
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.9e-33 Score=302.14 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=193.6
Q ss_pred cccccccccceEEEEEEC-CCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 504 KDKLGAGGFGAVYRGVLA-NRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
...||+|+||.||++... ++..||||.+.. .....+.+.+|+.++.+++|+||+++++.+..++..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 357999999999999864 578899999873 333456788999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++.. ..+++..+..++.||+.||+|||+ ++|+||||||+||++++++.++|+|||++....... ..
T Consensus 107 ~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---~~ 174 (292)
T cd06658 107 TDIVTH------TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---PK 174 (292)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc---cc
Confidence 998842 247899999999999999999998 899999999999999999999999999987653321 11
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||........ ..... ..+...+..
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------~~~~~-----~~~~~~~~~-- 240 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-------MRRIR-----DNLPPRVKD-- 240 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHH-----hcCCCcccc--
Confidence 2335688999999999988999999999999999999999999974332110 00111 111111111
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.......+..++.+|++.+|.+||+++++++.
T Consensus 241 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 -SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00112245567788999999999999999864
No 272
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.2e-33 Score=299.98 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=195.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCccc------chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQ------GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~------~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
|.+.+.||+|+||.||+|... +++.|++|.+..... ....+..|++++++++|+||+++++++.+....++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 556788999999999999964 588999999974322 2345778999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+ +++|.+++.... ..+++..+..++.||++||.|||+ .+|+|+||||+||+++.++.+||+|||+++...
T Consensus 82 e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 82 EFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred ccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 999 999999995432 358999999999999999999998 899999999999999999999999999998764
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh------
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK------ 726 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~------ 726 (852)
.... ......++..|+|||.+.+ ..++.++||||||++++||++|..+|......+.. .. .......
T Consensus 154 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~ 227 (298)
T cd07841 154 SPNR---KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL--GK-IFEALGTPTEENW 227 (298)
T ss_pred CCCc---cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH--HH-HHHHcCCCchhhh
Confidence 3211 1222346778999998865 46789999999999999999998888654322110 00 0000000
Q ss_pred ---CCcccccccccCCCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 727 ---GNVKGIVDKSLAGEDVD-----IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 727 ---~~~~~~~d~~l~~~~~~-----~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.......... .....+ ......+.+++.+|++.+|++||++.||++.
T Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 228 PGVTSLPDYVEFK-PFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhccccccccccc-ccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 000111 1123467789999999999999999999974
No 273
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.4e-33 Score=299.32 Aligned_cols=261 Identities=21% Similarity=0.339 Sum_probs=192.9
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|.+.+.||+|+||.||+|... +++.||+|.+.... .....+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07844 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYL 85 (291)
T ss_pred ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecC
Confidence 4667789999999999999965 57899999986322 22345778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++ +|.+++.... ..+++.....++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~-~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 86 DT-DLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 75 9999886432 357899999999999999999998 899999999999999999999999999987543211
Q ss_pred CcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC---c---
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN---V--- 729 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~--- 729 (852)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... + ......+.... .
T Consensus 158 ---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 158 ---KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ-L-HKIFRVLGTPTEETWPGV 232 (291)
T ss_pred ---ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH-H-HHHHHhcCCCChhhhhhh
Confidence 11122346788999999875 45889999999999999999999999654311110 0 00000000000 0
Q ss_pred ---ccccc--------cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 730 ---KGIVD--------KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 730 ---~~~~d--------~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..... ..+............+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000 000000001111245678899999999999999999875
No 274
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.3e-33 Score=300.61 Aligned_cols=262 Identities=24% Similarity=0.342 Sum_probs=195.4
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+|.+.++||+|+||.||++... +++.||+|++.... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 4667789999999999999975 47899999886322 2345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|..+.... ..+++..++.++.||+++|+|||+ .+++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 82 VDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred CCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999998876432 248999999999999999999998 89999999999999999999999999999876432
Q ss_pred CCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------HHHHhh
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA--------YEEFEK 726 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~ 726 (852)
. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||............... ......
T Consensus 154 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07846 154 G---EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQK 230 (286)
T ss_pred c---cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhcc
Confidence 2 12223457889999999875 45788999999999999999999999643321100000000 000000
Q ss_pred CCc-ccccccccCCCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNV-KGIVDKSLAGEDVD-----IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~-~~~~d~~l~~~~~~-----~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
... .....+.... ..+ ......+.+++.+|++.+|++||++.+|++
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 231 NPLFAGMRLPEVKE-IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred chHhhccccccccC-cchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 0000000000 000 012345788999999999999999999875
No 275
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=286.23 Aligned_cols=246 Identities=23% Similarity=0.336 Sum_probs=203.8
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.+.++||+|.||.|||+.. ..|+.+|+|.+.. +...+++..|+.++++.+.+++|+++|.+......++|||||--|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 34567999999999999985 4589999999873 345678999999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
|+.+.+..+ +++|++.++..+++..++||+|||. ..-||||||+.||||+-+|.+||+|||.|-.+.. .-
T Consensus 114 SiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD---TM 183 (502)
T KOG0574|consen 114 SISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD---TM 183 (502)
T ss_pred cHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhh---hH
Confidence 999999654 5689999999999999999999998 6779999999999999999999999999976542 22
Q ss_pred eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc-C
Q 003059 660 RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL-A 738 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~ 738 (852)
.....+.||+.|||||++..-.|..++||||||++..||..|++||....+.. ..-++...- .
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR----------------AIFMIPT~PPP 247 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR----------------AIFMIPTKPPP 247 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc----------------eeEeccCCCCC
Confidence 23356789999999999999999999999999999999999999996433211 111111111 1
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+.+....+-+++..|+-..|++|-|+.++++
T Consensus 248 TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 248 TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 11234455567889999999999999999888765
No 276
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=8.8e-33 Score=302.00 Aligned_cols=252 Identities=25% Similarity=0.264 Sum_probs=197.0
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.+.||+|+||.||++...+ ++.||+|.+.... ...+.+..|++++.+++|+||+++++.+.++...++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 35667889999999999999754 8899999987432 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++.... ...+++..+..++.|+++||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~~~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 82 YCPGGELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred ecCCCCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999999986432 3468899999999999999999998 8999999999999999999999999999875532
Q ss_pred CCCcc--------------------------eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 655 KDHRH--------------------------RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 655 ~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
..... .......|+..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 11100 0111245788999999999989999999999999999999999999754
Q ss_pred ccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCC----HHHHHH
Q 003059 709 QETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM----MGKVVQ 773 (852)
Q Consensus 709 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt----~~ev~~ 773 (852)
.... . .... ......- .........+.+++.+|++.+|++||+ ++++++
T Consensus 236 ~~~~--~-----~~~~--------~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 236 NRDE--T-----FSNI--------LKKEVTF-PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred chHH--H-----HHHH--------hcCCccC-CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 3211 0 0111 1111100 111113456778889999999999999 555544
No 277
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.8e-33 Score=295.69 Aligned_cols=246 Identities=23% Similarity=0.361 Sum_probs=197.2
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.+.+.++||+|+||.||+|... ++..||+|.+... ....+.+.+|+.++.+++|+||+++++++.++...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4556788999999999999864 5789999987632 234467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.. ..+++..+..++.|++.+|.|||+ .+++|+||||+||+++.++.++|+|||++..+....
T Consensus 85 ~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 85 GGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999999842 348899999999999999999998 899999999999999999999999999987654321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ......++..|+|||.+.+..++.++||||||+++|||++|..||....... .......... +.
T Consensus 156 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~-----~~ 220 (277)
T cd06641 156 I---KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-------VLFLIPKNNP-----PT 220 (277)
T ss_pred h---hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-------HHHHHhcCCC-----CC
Confidence 1 1123457889999999998889999999999999999999999996432110 0011111110 11
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
........+.+++.+|++.+|.+||++.++++.
T Consensus 221 -----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 -----LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -----CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111223456778899999999999999999983
No 278
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=276.36 Aligned_cols=247 Identities=26% Similarity=0.399 Sum_probs=194.2
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCcc---cc------hHHHHHHHHHhhcc-cccceeeeeeeeccCcee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE---QG------EKQFRMEVATISST-HHLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~------~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 569 (852)
|.-.+.||+|..++|-+... .++...|+|++.... .+ .+.-..|+.+|+++ .||+|+++.+++......
T Consensus 19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~ 98 (411)
T KOG0599|consen 19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFV 98 (411)
T ss_pred cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchh
Confidence 34457899999999988874 567889999886221 11 13345799999988 699999999999999999
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++|+|.|+.|.|.|||.. .-.++++...+|++|+.+|++|||. ++||||||||+|||+|++.++||+|||++
T Consensus 99 FlVFdl~prGELFDyLts-----~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 99 FLVFDLMPRGELFDYLTS-----KVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred hhhhhhcccchHHHHhhh-----heeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEecccee
Confidence 999999999999999954 3458999999999999999999999 89999999999999999999999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhcC------CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHH
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLANL------PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEE 723 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 723 (852)
..+.+.. ......||++|+|||.+... .|+...|+|+.||+||-|+.|.+||-.... ......
T Consensus 171 ~~l~~Ge----kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-------mlMLR~ 239 (411)
T KOG0599|consen 171 CQLEPGE----KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-------MLMLRM 239 (411)
T ss_pred eccCCch----hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-------HHHHHH
Confidence 9886543 34567899999999998543 478899999999999999999999953210 111222
Q ss_pred HhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 724 FEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.+++.. .-.+.+. +.....-+++.+|++.||.+|-|.+|+++
T Consensus 240 ImeGkyq-F~speWa------dis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 240 IMEGKYQ-FRSPEWA------DISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHhcccc-cCCcchh------hccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 2222211 1111111 11234557888899999999999999885
No 279
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.5e-32 Score=292.48 Aligned_cols=252 Identities=24% Similarity=0.399 Sum_probs=196.8
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCcc-------cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE-------QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
|...+.||+|+||.||++.. .+++.||+|.+.... ...+++..|++++++++|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 44567899999999999985 568899999986322 1246788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC-ceEEeecccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY-NAKVSDFGLAKL 651 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~ 651 (852)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++|+||||+||+++.++ .+||+|||++..
T Consensus 82 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 82 VEWMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EeccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999998543 357899999999999999999998 8999999999999998776 599999999976
Q ss_pred cCCCCCcc-eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 652 INPKDHRH-RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 652 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
........ .......++..|+|||.+.+..++.++||||||++++||++|+.||........... .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~---- 226 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL---IFKIASA---- 226 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH---HHHHhcc----
Confidence 64321111 112234578899999999888899999999999999999999999964332111110 0000000
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 731 GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+ ..+......+.+++.+|++.+|.+||++.++++
T Consensus 227 -~~~~-----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 227 -TTAP-----SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -CCCC-----CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0000 122233356778999999999999999999874
No 280
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-32 Score=293.88 Aligned_cols=245 Identities=23% Similarity=0.354 Sum_probs=195.3
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecC--cccchHHHHHHHHHhhccc---ccceeeeeeeeccCceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG--IEQGEKQFRMEVATISSTH---HLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~--~~~~~~~f~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lV~e 574 (852)
|.+.+.||+|+||.||+|.. .+++.|++|.+.. .....+++.+|++++++++ |||++++++++.++...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 45567899999999999996 5688999999863 2334567889999999987 9999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++.. ..+++..++.++.|++.+|.|||+ .+|+|+||+|+||++++++.++|+|||++..+..
T Consensus 83 ~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 83 YAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred cCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 9999999999843 258899999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.. .......|+..|+|||.+.+. .++.++||||||+++|||++|+.||........ . .. .....
T Consensus 154 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~-~~-----~~~~~ 218 (277)
T cd06917 154 NS---SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------M-ML-----IPKSK 218 (277)
T ss_pred Cc---cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------h-hc-----cccCC
Confidence 32 112334688899999998754 568999999999999999999999974422110 0 00 00111
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.+.+... .....+.+++.+|++.||++||++.++++
T Consensus 219 ~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 219 PPRLEDN----GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCCcc----cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1111110 12345678889999999999999999986
No 281
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.8e-33 Score=311.21 Aligned_cols=257 Identities=22% Similarity=0.317 Sum_probs=190.6
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC------ce
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG------KH 568 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~~ 568 (852)
..|.+.+.||+|+||.||++.. .+++.||||++.... ...+.+.+|++++++++|+||+++++++... ..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 3566778999999999999986 457889999987432 2345677899999999999999999987543 35
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++++|++ +++|.+++. ...+++..+..++.||+.||.|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 95 ~~~~~~~~-~~~l~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 95 VYLVTNLM-GADLNNIVK------CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred EEEEeecC-CCCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcc
Confidence 78999998 789988774 2348899999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH------
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY------ 721 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~------ 721 (852)
++..... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........ +.....
T Consensus 165 ~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~ 236 (343)
T cd07878 165 ARQADDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ--LKRIMEVVGTPS 236 (343)
T ss_pred ceecCCC------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCC
Confidence 9865321 223468999999999876 5689999999999999999999999965432110 000000
Q ss_pred ----HHHhhCCcccccccccCCCC-CCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 722 ----EEFEKGNVKGIVDKSLAGED-VDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 722 ----~~~~~~~~~~~~d~~l~~~~-~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
...........+. .+...+ .... ....+.+++.+|++.||.+||++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 237 PEVLKKISSEHARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHHhcchhhHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000 000000 0000 01235788999999999999999999853
No 282
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-32 Score=291.54 Aligned_cols=246 Identities=24% Similarity=0.381 Sum_probs=196.3
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|+||.||++.. .+++.+++|.+... ......+.+|++++++++|+||+++++.+..++..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 56678999999999999986 45788999998633 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC-CceEEeecccccccCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN-YNAKVSDFGLAKLINPK 655 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla~~~~~~ 655 (852)
++++|.+++.... ...+++..+..++.|++++|+|||+ .+++|+||||+||+++++ +.+||+|||++......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 82 PGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 9999999996532 3458899999999999999999998 899999999999999865 46899999999876432
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. ......++..|+|||.+.+..++.++||||||+++|||++|+.||+...... . .. .........
T Consensus 156 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~---~~-~~~~~~~~~---- 220 (256)
T cd08220 156 S----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA---L---VL-KIMSGTFAP---- 220 (256)
T ss_pred c----cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH---H---HH-HHHhcCCCC----
Confidence 1 1123457889999999998889999999999999999999999996543211 1 11 111111111
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.+......+.+++.+|++.+|.+||++.++++
T Consensus 221 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 221 ------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 01112335678889999999999999999986
No 283
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.2e-33 Score=298.75 Aligned_cols=264 Identities=23% Similarity=0.307 Sum_probs=197.4
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.|.+.++||+|+||.||+|... +++.|++|.++.. ....+.+.+|++++++++|+||+++++++.+++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 4677889999999999999975 4788999988732 23346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
++++.+..++.. ...+++..+..++.||+.||+|||+ .+++|+||+|+||++++++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 82 VERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred CCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 998777665532 2348899999999999999999998 89999999999999999999999999999876543
Q ss_pred CCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHH--------HHh-
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYE--------EFE- 725 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~--------~~~- 725 (852)
.. .......++..|+|||++.+. .++.++||||||+++|||++|+.||......+.......... .+.
T Consensus 154 ~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 154 PA--SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSS 231 (288)
T ss_pred cc--ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhccc
Confidence 21 122335578899999999888 889999999999999999999999975432211100000000 000
Q ss_pred hCCccc--ccccccC---CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 KGNVKG--IVDKSLA---GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 ~~~~~~--~~d~~l~---~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...... ..+.... ....+......+.+++.+|++.+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000 0000000 00001111356788999999999999999999875
No 284
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.6e-32 Score=298.11 Aligned_cols=206 Identities=24% Similarity=0.342 Sum_probs=169.9
Q ss_pred ccccccccccccceEEEEEEC---CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA---NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLL 571 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l 571 (852)
|.+.++||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.+++||||+++++++.+. ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 566788999999999999964 47899999998532 2345678899999999999999999999888 78999
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC----CCceEEeecc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE----NYNAKVSDFG 647 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~----~~~~kl~DFG 647 (852)
||||+++ +|.+++..........++...+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999975 67777754333233468899999999999999999998 89999999999999999 9999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCcccccccc
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQE 710 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~ 710 (852)
+++................++..|+|||.+.+. .++.++||||||++++||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 998764332211222335678899999988764 578999999999999999999999975543
No 285
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-32 Score=296.73 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=198.5
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.+|.+.+.||+|+||.||++.. .+++.|++|.+.. .....+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 4667788999999999999985 4578899999863 3334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++.. ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred CCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 99999999853 247888999999999999999998 899999999999999999999999999987654322
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
. ......+++.|+|||.+.+..++.++||||||+++|||++|+.||.......... ...... .+.
T Consensus 170 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-------~~~~~~-----~~~ 234 (293)
T cd06647 170 S---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNG-----TPE 234 (293)
T ss_pred c---ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-------ehhcCC-----CCC
Confidence 1 1223458889999999988889999999999999999999999997543211100 000000 000
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
. .........+.+++.+|++.+|++||++.+++..
T Consensus 235 ~---~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 235 L---QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred C---CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 1111122356678899999999999999999864
No 286
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-32 Score=299.53 Aligned_cols=254 Identities=21% Similarity=0.237 Sum_probs=195.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
|.+.+.||+|+||.||++... .++.|++|.+.... ...+.+.+|+++++.++||||+++++.+.++++.++||||
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY 82 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence 556789999999999999965 46789999887332 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 83 VEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred CCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999543 348899999999999999999998 89999999999999999999999999998742110
Q ss_pred C------------CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHH
Q 003059 656 D------------HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEE 723 (852)
Q Consensus 656 ~------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 723 (852)
. ..........++..|+|||.+....++.++||||||+++|||++|+.||....... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-------~~~~ 227 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-------LFGQ 227 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHH
Confidence 0 00001112457889999999988889999999999999999999999996432110 0111
Q ss_pred HhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 724 FEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
..... ...+... ......+.+++.+|++.+|++||+..++.+.|+.
T Consensus 228 ~~~~~---~~~~~~~-----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 228 VISDD---IEWPEGD-----EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHhcc---cCCCCcc-----ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11111 0001100 0122346788899999999999998777777654
No 287
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-32 Score=295.62 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=190.1
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc--cchHHHHHHHHH-hhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE--QGEKQFRMEVAT-ISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~f~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
+.+.+.||+|+||.||++... +++.||+|+++... ....++..|+.+ ++.++||||+++++++..++..++||||+
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (283)
T cd06617 3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM 82 (283)
T ss_pred ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence 556788999999999999965 58899999987432 234456667665 56678999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCC-CcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRD-CIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+ ++|.+++..... ....+++..++.++.||+.||+|||+ + +++||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 83 D-TSLDKFYKKVYD-KGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred c-ccHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 6 689888864322 23568999999999999999999998 5 8999999999999999999999999999865321
Q ss_pred CCcceeeeeecCCCCCCChhhhhc----CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLAN----LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
.......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||....... ..+ ......
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~-----~~~~~~---- 223 (283)
T cd06617 158 ----VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-QQL-----KQVVEE---- 223 (283)
T ss_pred ----cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-HHH-----HHHHhc----
Confidence 11123457889999998865 456889999999999999999999996432110 000 000111
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+.+.. ......+.+++.+|++.+|.+||++.+|++
T Consensus 224 -~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 -PSPQLPA----EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -CCCCCCc----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111111 011245678889999999999999999986
No 288
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-33 Score=304.52 Aligned_cols=244 Identities=23% Similarity=0.361 Sum_probs=193.6
Q ss_pred cccccccccccceEEEEEEC-CCcEEEEEEec-----CcccchHHHHHHHHHhhcccccceeeeeeeeccCc--eeeEEE
Q 003059 502 GFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLE-----GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK--HRLLVY 573 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~-----~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lV~ 573 (852)
.|.++||+|+|-+||||.+. .|..||--.++ ......++|..|+.+|+.|+|+||++++.++.+.. ...+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 45679999999999999864 36666633222 33344578999999999999999999999887655 478999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeeccccccc
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKLI 652 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~ 652 (852)
|.|..|+|..|+.+.++ ++.+.+.+|++||++||.|||.+. ++|||||||-.||+|+. .|.+||+|+|||..+
T Consensus 123 EL~TSGtLr~Y~kk~~~-----vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR-----VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred ecccCCcHHHHHHHhcc-----CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 99999999999976554 778899999999999999999976 68999999999999974 699999999999987
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
+.. ......|||.|||||.+. ..|++..||||||+.++||+|+..||..-... .-.+.+...|....-
T Consensus 197 r~s-----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~------AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 197 RKS-----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP------AQIYKKVTSGIKPAA 264 (632)
T ss_pred hcc-----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH------HHHHHHHHcCCCHHH
Confidence 542 234478999999999988 78999999999999999999999999633221 123444444433332
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.+-- -..+.++|..|+.. ..+||++.|+++
T Consensus 265 l~kV~---------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 265 LSKVK---------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hhccC---------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 22211 12456778889999 999999999985
No 289
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-33 Score=291.95 Aligned_cols=246 Identities=24% Similarity=0.370 Sum_probs=207.0
Q ss_pred hcccccccccccccceEEEEE-ECCCcEEEEEEecCccc---chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 499 STKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQ---GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~---~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.-|.+.+.||+|.|..|-+++ .-.|..||||++.+.+. ....+..|+.-|+.++|||||+|+.+.......|||.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 356777899999999999997 35788999999985543 34578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe-CCCCceEEeecccccccC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL-DENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl-~~~~~~kl~DFGla~~~~ 653 (852)
.=.+|+|.+||.++.. .+.+....+++.||+.|+.|+|+ ..+|||||||+||.+ ..-|-+||.|||++..+.
T Consensus 98 LGD~GDl~DyImKHe~----Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE----GLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred ecCCchHHHHHHhhhc----cccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 9999999999987754 48889999999999999999999 789999999999886 567899999999998876
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCC-CCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPIT-SKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
+. ...+...|...|-|||++.+..|+ ++.||||||||||-|++|+.||+..++.+. +.-+
T Consensus 171 PG----~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET---------------LTmI 231 (864)
T KOG4717|consen 171 PG----KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET---------------LTMI 231 (864)
T ss_pred Cc----chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh---------------hhhh
Confidence 54 345667899999999999999887 688999999999999999999986544321 1122
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+|-.. ..+.....++.++|..|+..||++|.+.+||+.
T Consensus 232 mDCKY---tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 232 MDCKY---TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hcccc---cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 22211 344455667889999999999999999999985
No 290
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.4e-32 Score=296.67 Aligned_cols=263 Identities=21% Similarity=0.277 Sum_probs=191.3
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.|.+.+.||+|+||.||+|... +++.|++|++... ......+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 4667789999999999999864 5788999998733 223346789999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
. ++|.+++... ...+.+..+..++.|++.||+|||+ .+|+|+||||+|||++.++++||+|||+++......
T Consensus 86 ~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 86 H-TDLAQYMIQH----PGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred c-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 5 6787777433 2347788888999999999999998 899999999999999999999999999997643221
Q ss_pred CcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHH---------HHh-
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYE---------EFE- 725 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~---------~~~- 725 (852)
. ......++..|+|||.+.+. .++.++||||||+++|||++|+.||+............|... ...
T Consensus 158 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 158 Q---TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred C---CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 1 11233468899999998754 578899999999999999999999975432211110000000 000
Q ss_pred -hCCccccccc----ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 -KGNVKGIVDK----SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 -~~~~~~~~d~----~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.......... .+............+.+++.+|++.||.+|||+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000000 00000000011245667889999999999999999864
No 291
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.2e-32 Score=294.32 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=199.8
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
.+.+.+.||+|+||.||+|... +++.+++|.+.......+.+.+|++++++++|+||+++++++......++|+||+++
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 99 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG 99 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence 3455678999999999999976 578899999985444567889999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++.... ..+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++........
T Consensus 100 ~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 100 GSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred CcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence 99999996532 368999999999999999999998 8999999999999999999999999999876543211
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
......++..|+|||.+.+..++.++||||||+++|||++|+.||........ . .......... .
T Consensus 172 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~------~-~~~~~~~~~~-----~- 236 (286)
T cd06614 172 --KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA------L-FLITTKGIPP-----L- 236 (286)
T ss_pred --hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH------H-HHHHhcCCCC-----C-
Confidence 11233478899999999988899999999999999999999999864322110 0 0111111100 0
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.........+.+++.+|++.+|.+||++.+|++
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 237 --KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred --cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 001112245678899999999999999999985
No 292
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.8e-32 Score=291.24 Aligned_cols=253 Identities=25% Similarity=0.395 Sum_probs=194.1
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc---c--------chHHHHHHHHHhhcccccceeeeeeeeccCce
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---Q--------GEKQFRMEVATISSTHHLNLVRLVGFSSEGKH 568 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~--------~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~ 568 (852)
|...+.||+|+||.||+|... +++.||+|.++... . ..+.+..|++++.+++|+||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 445678999999999999854 58899999875211 0 12457889999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||+ .+++||||+|+||+++.++.++|+|||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred eEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccc
Confidence 99999999999999999643 358889999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCC--CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLP--ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
++....... ........++..|+|||.+.... ++.++||||||+++|||++|+.||....... . .. ....
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~-~~-~~~~ 226 (272)
T cd06629 155 SKKSDDIYD-NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-----A-MF-KLGN 226 (272)
T ss_pred ccccccccc-ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-----H-HH-Hhhc
Confidence 986543211 11223355889999999987654 7899999999999999999999996332110 0 00 0011
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
......+... ...+....+.+++..|++.+|.+||++.+|++.
T Consensus 227 ~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 227 KRSAPPIPPD-----VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cccCCcCCcc-----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1111111111 111123466778889999999999999998863
No 293
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.2e-33 Score=320.02 Aligned_cols=203 Identities=21% Similarity=0.261 Sum_probs=160.4
Q ss_pred HHhcccccccccccccceEEEEEECC--CcEEE------------------EEEecCcccchHHHHHHHHHhhcccccce
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLAN--RTVVA------------------VKQLEGIEQGEKQFRMEVATISSTHHLNL 556 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~va------------------vK~l~~~~~~~~~f~~E~~~l~~l~h~ni 556 (852)
....|.+.++||+|+||.||++.++. +..++ .|.+........++++|+++|.+++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34578889999999999999987532 11111 12222222334568899999999999999
Q ss_pred eeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC
Q 003059 557 VRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD 636 (852)
Q Consensus 557 v~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~ 636 (852)
+++++++.+.+..|+|+|++ .++|.+++..................++.||+.||+|||+ ++||||||||+||||+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence 99999999999999999998 4578787754332212233456677899999999999998 8999999999999999
Q ss_pred CCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccc
Q 003059 637 ENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNF 705 (852)
Q Consensus 637 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~ 705 (852)
.++.+||+|||+++.+.... ........||..|+|||.+.+..++.++|||||||++|||++|..++
T Consensus 302 ~~~~vkL~DFGla~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKER--EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCCCEEEEeCCCceecCccc--ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999998764321 11223356899999999999999999999999999999999988543
No 294
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.6e-33 Score=296.92 Aligned_cols=261 Identities=21% Similarity=0.309 Sum_probs=197.9
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|+||.||+|... +++.|++|++.... .....+.+|+.++++++|+||+++++++..+...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 567789999999999999964 68899999987432 33467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
+++|.+++.... ..+++..++.++.||+++|+|||+ .+++|+||||+||+++.++.++|+|||++.......
T Consensus 82 -~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 82 -PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred -CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 999999986432 458999999999999999999998 899999999999999999999999999998765432
Q ss_pred CcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC--------
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG-------- 727 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-------- 727 (852)
. .......++..|+|||.+.+. .++.++||||||++++||++|+.+|........ ...........
T Consensus 154 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07832 154 P--RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPNEETWPGL 228 (286)
T ss_pred C--CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCChHHHhhc
Confidence 1 122345688999999998654 468999999999999999999888864332111 01111100000
Q ss_pred ----CcccccccccCCCC---CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 728 ----NVKGIVDKSLAGED---VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 728 ----~~~~~~d~~l~~~~---~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
....+..+...... ...+....+.+++.+|++.+|.+||+++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000000000 000122567889999999999999999998763
No 295
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.3e-32 Score=294.09 Aligned_cols=243 Identities=23% Similarity=0.360 Sum_probs=194.4
Q ss_pred cccccccccceEEEEEE-CCCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 504 KDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
.+.||+|++|.||++.. .+++.+++|++... ....+.+.+|+.++++++|+||+++++++...++.++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 46899999999999985 46788999988632 33456688999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++.. ..+++..+..++.|++.+|+|||+ .+++||||+|+||+++.++.++|+|||++....... ..
T Consensus 104 ~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---~~ 171 (285)
T cd06648 104 TDIVTH------TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---PR 171 (285)
T ss_pred HHHHHh------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCC---cc
Confidence 999853 248899999999999999999998 899999999999999999999999999887654321 11
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ......... .+.+..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-------~~~~~~~~~-----~~~~~~-- 237 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-------AMKRIRDNL-----PPKLKN-- 237 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-------HHHHHHhcC-----CCCCcc--
Confidence 223458899999999998889999999999999999999999986432110 011111110 111110
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.......+.+++.+|++.+|++||++.++++
T Consensus 238 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 -LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1112246778899999999999999999985
No 296
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.6e-32 Score=290.05 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=197.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
+.+.+.||+|+||.||++... +++.+++|.+... .....++.+|++++++++||||+++++.+...+..++|+||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 456678999999999999975 5788999998743 3445678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++.... ..++...+..++.|++++|+|||+. .+++|+||||+||++++++.++|+|||.+........
T Consensus 83 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 83 GGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred CCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 999999996432 4688889999999999999999972 5899999999999999999999999999876532111
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......... .... ........ .+.+
T Consensus 157 -----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~-----~~~~ 224 (265)
T cd06605 157 -----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG-IFEL-LQYIVNEP-----PPRL 224 (265)
T ss_pred -----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc-HHHH-HHHHhcCC-----CCCC
Confidence 1156888999999999999999999999999999999999999644221111 1111 11111110 0111
Q ss_pred CCCCCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 738 AGEDVDIE-QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 738 ~~~~~~~~-~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.. ....+.+++..|+..+|++||++.+++.
T Consensus 225 -----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 225 -----PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -----ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 111 2345678889999999999999999875
No 297
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=321.83 Aligned_cols=266 Identities=27% Similarity=0.377 Sum_probs=208.9
Q ss_pred HHHHHhcccccccccccccceEEEEEEC--------CCcEEEEEEecCc--ccchHHHHHHHHHhhcc-cccceeeeeee
Q 003059 494 KELQRSTKGFKDKLGAGGFGAVYRGVLA--------NRTVVAVKQLEGI--EQGEKQFRMEVATISST-HHLNLVRLVGF 562 (852)
Q Consensus 494 ~el~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l-~h~niv~l~g~ 562 (852)
.|+......+.+.||+|.||.|++|... ....||||+++.. ....+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3444444456679999999999999843 1457999999833 34567899999999998 69999999999
Q ss_pred eccCceeeEEEeecCCCCHHHHhhhcc---------cCCc--cccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCC
Q 003059 563 SSEGKHRLLVYEFMKNGSLDNFLFANE---------EGSG--KLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPE 631 (852)
Q Consensus 563 ~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~ 631 (852)
|.+++..++|+||++.|+|.+||...+ .... ..|.....+.++.|||.|++||++ .++|||||.++
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAAR 447 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhh
Confidence 999999999999999999999998766 1111 248999999999999999999999 88999999999
Q ss_pred ceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCcccccccc
Q 003059 632 NILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQE 710 (852)
Q Consensus 632 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~ 710 (852)
||||.++..+||+|||+++.....+..........-...|||||.+....++.|+|||||||+||||+| |..||.....
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 999999999999999999976553332211111113567999999999999999999999999999998 8889864210
Q ss_pred ccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 711 TNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
. .. ..+.+.++... ..+.....++.+++..||+.+|++||++.++++.|+..
T Consensus 528 ~--~~----l~~~l~~G~r~----------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 528 T--EE----LLEFLKEGNRM----------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred H--HH----HHHHHhcCCCC----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 0 01 12233333222 12223345667888899999999999999999999884
No 298
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.7e-32 Score=285.06 Aligned_cols=247 Identities=25% Similarity=0.405 Sum_probs=199.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCccc-chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQ-GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
|...+.||+|++|.||++... +++.+++|++..... ..+++.+|++.+++++|+|++++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 455678999999999999975 678899999985433 567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++.... ..+++..+..++.|++.+|+|||+ .+++||||+|+||++++++.++|+|||.+........
T Consensus 82 ~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 82 GSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 99999986432 468999999999999999999998 8999999999999999999999999999987654321
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.....++..|+|||.+.....+.++||||||++++||++|+.||........ . .......... +
T Consensus 154 ---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~-~~~~~~~~~~-----~- 217 (253)
T cd05122 154 ---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA------L-FKIATNGPPG-----L- 217 (253)
T ss_pred ---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH------H-HHHHhcCCCC-----c-
Confidence 2345688899999999988899999999999999999999999964321100 0 0011010111 1
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.........+.+++.+|++.||.+||++.++++
T Consensus 218 --~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 218 --RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111345778889999999999999999875
No 299
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.5e-33 Score=295.25 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=196.7
Q ss_pred HhcccccccccccccceEEEEEECCCcEEEEEEec---CcccchHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEE
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLE---GIEQGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~---~~~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~ 573 (852)
...|...++||+||.+.||++...+.+.+|+|++. .+.+...-|.+|++.|.+|+ |.+||+|++|-..++..||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 34566678999999999999998888889999876 34455677999999999995 999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||= ..+|...|.+.. .....| .+..+..|++.++.++|+ ++|||.||||.|+|+- .|.+||+|||+|..+.
T Consensus 440 E~G-d~DL~kiL~k~~---~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKK---SIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ 510 (677)
T ss_pred ecc-cccHHHHHHhcc---CCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence 986 569999996543 233445 667789999999999999 8999999999999985 4689999999999887
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcC-----------CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHH
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANL-----------PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYE 722 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 722 (852)
.+. .........||+.||+||.+... ++++++||||+||+||+|+-|+.||.... ..|+
T Consensus 511 ~DT-TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-------n~~a-- 580 (677)
T KOG0596|consen 511 PDT-TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-------NQIA-- 580 (677)
T ss_pred ccc-cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-------HHHH--
Confidence 643 22334557899999999998533 26689999999999999999999996321 1111
Q ss_pred HHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 723 EFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
++..+.++.-.-+......-..+++++..||..||++||+..++++
T Consensus 581 -----Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 -----KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -----HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2233444422111111111122889999999999999999999986
No 300
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.2e-32 Score=293.86 Aligned_cols=261 Identities=22% Similarity=0.333 Sum_probs=195.1
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
|.+.++||.|++|.||+|+.. +++.||+|.+... ....+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 456789999999999999975 5889999998733 2334667889999999999999999999999999999999998
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+ +|.+++..... ...+++..+..++.|+++||+|||+ .+++||||||+||++++++.++|+|||+++......
T Consensus 82 ~-~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~- 154 (284)
T cd07836 82 K-DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV- 154 (284)
T ss_pred c-cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-
Confidence 5 89888864332 3468999999999999999999998 899999999999999999999999999997653211
Q ss_pred cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------HHHHhhCC
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA--------YEEFEKGN 728 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~~ 728 (852)
.......++..|++||.+.+. .++.++||||||+++|||++|+.||......+........ +..+. .
T Consensus 155 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 230 (284)
T cd07836 155 --NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS--Q 230 (284)
T ss_pred --cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh--c
Confidence 112234568899999998664 5688999999999999999999999755432111100000 00000 0
Q ss_pred cccccccccCC-CCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 729 VKGIVDKSLAG-EDVD-----IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 729 ~~~~~d~~l~~-~~~~-----~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..... ..... .... ......+.+++.+|++.||.+||++.+|++
T Consensus 231 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 231 LPEYK-PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred Cchhc-ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00000 0000 111235678899999999999999999875
No 301
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2e-32 Score=289.55 Aligned_cols=248 Identities=23% Similarity=0.361 Sum_probs=196.9
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|+||.||++... ++..+|+|.+... ....+.+.+|++++++++|+||+++++.+.+....++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 456788999999999999965 4788999998632 234567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC-ceEEeecccccccCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY-NAKVSDFGLAKLINPK 655 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~ 655 (852)
++++|.+++.... ...+++..+..++.|+++||.|||+ .+++|+||||+||++++++ .+||+|||.+......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 82 DGGDLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999996432 3357899999999999999999998 8999999999999999885 4699999999876432
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
.. ......|+..|+|||.+.+..++.++||||||++++||++|+.||...... ..... ..... +.+
T Consensus 156 ~~---~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~----~~~ 221 (257)
T cd08225 156 ME---LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH------QLVLK-ICQGY----FAP 221 (257)
T ss_pred cc---cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHH-Hhccc----CCC
Confidence 21 122345888999999998888999999999999999999999999643211 11111 11111 111
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
........+.+++.+|++.+|++||++.+|++.
T Consensus 222 ------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 222 ------ISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ------CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111122357788899999999999999999753
No 302
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-32 Score=291.05 Aligned_cols=245 Identities=24% Similarity=0.299 Sum_probs=197.8
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
|.+.+.||.|+||.||++... ++..|++|.+.... ...+.+.+|++++++++||||+++++++.++...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 566789999999999999975 58889999987322 3457889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++++|.+++... ..+++..+..++.|++++|.|||+ .+++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 82 LLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 9999999999543 358899999999999999999998 89999999999999999999999999999876442
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
. ......++..|+|||.+....++.++|+||||+++|+|++|+.||.......... ....... .. .
T Consensus 154 ~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~--~~----~ 219 (258)
T cd05578 154 T----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ----IRAKQET--AD----V 219 (258)
T ss_pred c----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHH----HHHHhcc--cc----c
Confidence 2 2233558889999999998889999999999999999999999997554321111 1111100 00 0
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCH--HHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMM--GKVV 772 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~--~ev~ 772 (852)
..+......+.+++.+|++.+|.+||++ +|++
T Consensus 220 -----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 -----LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -----cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1112223567788899999999999999 5543
No 303
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.2e-32 Score=294.99 Aligned_cols=241 Identities=26% Similarity=0.301 Sum_probs=194.8
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.+.||+|+||.||++... +++.+|+|.+.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 3567789999999999999965 57899999986322 234668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++... ..++...+..++.|++.||+|||+ .+++|+||+|+|||++.++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 82 YVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred cCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999643 358899999999999999999998 8999999999999999999999999999987643
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
. .....+++.|+|||.+.+...+.++||||||+++|||++|+.||...... ........+..
T Consensus 154 ~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~----- 215 (290)
T cd05580 154 R------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-------QIYEKILEGKV----- 215 (290)
T ss_pred C------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCc-----
Confidence 2 22345889999999998888999999999999999999999999644311 01111111110
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVV 772 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~ 772 (852)
.+ +......+.+++.+|++.+|.+|| ++++++
T Consensus 216 -~~-----~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 216 -RF-----PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred -cC-----CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 01 111134566788899999999998 555555
No 304
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.8e-32 Score=296.26 Aligned_cols=263 Identities=19% Similarity=0.214 Sum_probs=183.6
Q ss_pred HHHHhcccccccccccccceEEEEEECCC----cEEEEEEecCcccc---h---------HHHHHHHHHhhcccccceee
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLANR----TVVAVKQLEGIEQG---E---------KQFRMEVATISSTHHLNLVR 558 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~~---~---------~~f~~E~~~l~~l~h~niv~ 558 (852)
++....|.+.++||+|+||.||+|...+. ..+++|........ + .....+...+..+.|+|+++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 44556788899999999999999996543 45666654321111 0 11223344566778999999
Q ss_pred eeeeeccCc----eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceE
Q 003059 559 LVGFSSEGK----HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENIL 634 (852)
Q Consensus 559 l~g~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIL 634 (852)
+++++.... ..++++|++. .++.+.+... ...++..+..++.|+++||+|||+ .+|+||||||+|||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nil 158 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIM 158 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEE
Confidence 999765443 4578888774 3666665322 224677889999999999999998 89999999999999
Q ss_pred eCCCCceEEeecccccccCCCCCcc----eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccccc
Q 003059 635 LDENYNAKVSDFGLAKLINPKDHRH----RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQE 710 (852)
Q Consensus 635 l~~~~~~kl~DFGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~ 710 (852)
++.++.++|+|||+++.+....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 159 l~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 159 VDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred EcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 9999999999999998764321111 111234699999999999999999999999999999999999999975532
Q ss_pred ccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 711 TNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
... +.......+. ..+....+.- ... ...+.+++..|++.+|++||++.++++.|+
T Consensus 239 ~~~--~~~~~~~~~~----~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 239 NGN--LIHAAKCDFI----KRLHEGKIKI-KNA---NKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred chH--HHHHhHHHHH----HHhhhhhhcc-CCC---CHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111 1111110000 0111111000 111 244667778899999999999999998773
No 305
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.1e-32 Score=286.39 Aligned_cols=250 Identities=25% Similarity=0.353 Sum_probs=201.5
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEecCcc--cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIE--QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
+.+.+.||+|++|.||+++... ++.|++|++.... ....++.+|+..+.+++|+||+++++++...+..++||||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 4567899999999999999764 8899999987443 346789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++... ..++...++.++.|++++|+|||+. .+++||||+|+||+++.++.++|+|||++........
T Consensus 83 ~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 83 GGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 99999999643 4588999999999999999999973 5899999999999999999999999999987643222
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSL 737 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (852)
. .....++..|+|||.+.+..++.++||||||+++|||++|+.||..........+. ........ +
T Consensus 156 ~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~----~~~~~~~~-----~-- 221 (264)
T cd06623 156 Q---CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM----QAICDGPP-----P-- 221 (264)
T ss_pred c---ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHH----HHHhcCCC-----C--
Confidence 1 12345788999999999989999999999999999999999999755421111111 11111100 1
Q ss_pred CCCCCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 738 AGEDVDIE-QVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 738 ~~~~~~~~-~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+.. ....+.+++.+|++.+|.+||++.++++.
T Consensus 222 ---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 ---SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ---CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11111 33567788888999999999999999863
No 306
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.2e-32 Score=295.65 Aligned_cols=264 Identities=20% Similarity=0.282 Sum_probs=192.5
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhccc-ccceeeeeeeeccCce-----e
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKH-----R 569 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~-----~ 569 (852)
.|.+.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++++++ |+||+++++++..... .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 3566788999999999999965 58899999886332 23357888999999995 6999999999877665 8
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeeccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGL 648 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGl 648 (852)
++||||+++ +|.+++..........+++..++.++.||+.||.|||+ ++|+||||||+||+++. ++.+||+|||+
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeeccc
Confidence 999999985 89998865443334568999999999999999999998 89999999999999998 89999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG 727 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (852)
++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||......... .. ........
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~--~~-~~~~~~~~ 231 (295)
T cd07837 158 GRAFSIPV---KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL--LH-IFKLLGTP 231 (295)
T ss_pred ceecCCCc---cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH--HH-HHHHhCCC
Confidence 87653211 11122346788999998865 45789999999999999999999999754321110 00 00000000
Q ss_pred Ccc---cc---ccc--ccCCCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 728 NVK---GI---VDK--SLAGEDVD-----IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 728 ~~~---~~---~d~--~l~~~~~~-----~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
... .. .+. ........ ......+.+++.+|++.+|.+||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 00 000 00000000 112245678899999999999999999875
No 307
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=9.8e-33 Score=304.24 Aligned_cols=202 Identities=30% Similarity=0.461 Sum_probs=173.6
Q ss_pred ccccccccccccceEEEEE-ECCCcEEEEEEecC--cccchHHHHHHHHHhhcccccceeeeeeeeccC------ceeeE
Q 003059 501 KGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEG--IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEG------KHRLL 571 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~--~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~~~~l 571 (852)
+...+.||+|+||.||+|+ -..|+.||||.++. .....+...+|+++|++++|+|||+++++-.+. ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3446789999999999999 56799999999984 334456778999999999999999999975543 46789
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC--CCCc--eEEeecc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD--ENYN--AKVSDFG 647 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~--~~~~--~kl~DFG 647 (852)
|||||.+|||+..|....+ ...|++.+.+.++.+++.||.|||+ ++|+||||||.||++- ++|+ -||+|||
T Consensus 95 vmEyC~gGsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEeecCCCcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 9999999999999976543 4569999999999999999999998 8999999999999984 3343 6999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccc
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQET 711 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~ 711 (852)
.|+.+..+ .......||..|++||.+.. +.++..+|.|||||++||.+||..||......
T Consensus 170 ~Arel~d~----s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 170 AARELDDN----SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred ccccCCCC----CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 99988543 36778899999999999985 88999999999999999999999999765444
No 308
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=2.7e-32 Score=293.99 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=190.0
Q ss_pred ccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEeecCC
Q 003059 503 FKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.++||+|+||.||++... +++.||+|.+... ......+.+|+.++.++. |+||+++++++..++..+++|||++
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~- 86 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD- 86 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-
Confidence 4568999999999999964 5789999998733 234567889999999996 9999999999999999999999985
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.++...........+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 162 (288)
T cd06616 87 ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI-- 162 (288)
T ss_pred CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC--
Confidence 4665543211111234689999999999999999999972 489999999999999999999999999997654321
Q ss_pred ceeeeeecCCCCCCChhhhhcC---CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANL---PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||..... ... .......+. .+
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~-~~~~~~~~~-----~~ 229 (288)
T cd06616 163 --AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFD-QLTQVVKGD-----PP 229 (288)
T ss_pred --ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHH-HHhhhcCCC-----CC
Confidence 11233578899999999766 689999999999999999999999964321 000 000000000 11
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.+.. .........+.+++.+|++.+|.+||++.+|++.
T Consensus 230 ~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 ILSN-SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCC-cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111 1111233467788999999999999999999863
No 309
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.98 E-value=4.5e-32 Score=290.87 Aligned_cols=241 Identities=25% Similarity=0.302 Sum_probs=184.5
Q ss_pred cccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhh---cccccceeeeeeeeccCceeeEEEeecC
Q 003059 506 KLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATIS---STHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~---~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.||+|+||.||++... +++.+|+|.+.... .....+..|..++. ..+|+||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 57899999886322 22233445544433 3479999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~- 151 (279)
T cd05633 81 GGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (279)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-
Confidence 99999998643 348999999999999999999998 899999999999999999999999999987553211
Q ss_pred cceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.....|+..|+|||.+.. ..++.++|||||||+++||++|+.||..........+.. .. ......
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~------~~~~~~ 217 (279)
T cd05633 152 ----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR----MT------LTVNVE 217 (279)
T ss_pred ----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH----Hh------hcCCcC
Confidence 122458999999999864 568999999999999999999999997543222111100 00 000111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~~ 774 (852)
.+......+.+++..|++.||.+|| +++++++.
T Consensus 218 -----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 -----LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -----CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1112234567888899999999999 58888774
No 310
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=2.6e-32 Score=293.37 Aligned_cols=260 Identities=22% Similarity=0.294 Sum_probs=192.2
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|+..+.||.|+||.||+|+.. +++.|+||++.... .....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 455678999999999999864 57899999887322 23357889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
. ++|..++.... ...+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++.......
T Consensus 82 ~-~~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 82 H-QDLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred c-cCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 5 68999885432 3458999999999999999999998 899999999999999999999999999987654321
Q ss_pred CcceeeeeecCCCCCCChhhhhcCC-CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC-------
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLP-ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN------- 728 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~------- 728 (852)
.......++..|+|||.+.+.. ++.++||||||+++|||+||+.||........ +... ........
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~ 228 (284)
T cd07860 155 ---RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRI-FRTLGTPDEVVWPGV 228 (284)
T ss_pred ---cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHH-HHHhCCCChhhhhhh
Confidence 1122334678899999887654 58899999999999999999999965432111 0000 00000000
Q ss_pred -----cccccccccCCC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 729 -----VKGIVDKSLAGE--DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 729 -----~~~~~d~~l~~~--~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+....... .........+.+++.+|++.||.+||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000 000001134568899999999999999999875
No 311
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=9.3e-33 Score=304.51 Aligned_cols=268 Identities=23% Similarity=0.319 Sum_probs=195.7
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecC--cccchHHHHHHHHHhhcccccceeeeeeeeccC-----ceee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG--IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEG-----KHRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~--~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~ 570 (852)
..|.+.++||+|+||.||+|.. .+++.||+|.+.. .......+..|+.++++++|+||+++++++... ...+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 3567788999999999999985 4588999999863 223446688899999999999999999986544 3579
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+|+||+++ +|.+++. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 85 lv~e~~~~-~l~~~~~------~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 85 IVQELMET-DLYKLIK------TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEehhccc-CHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECccccee
Confidence 99999964 8887773 2358899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC--
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG-- 727 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-- 727 (852)
................++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ .......+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~---~~~~~~~~~~~~~ 231 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ---LNLILGVLGTPSQ 231 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCCH
Confidence 76433222222233568899999998765 4688999999999999999999999965322110 00000000000
Q ss_pred -Cccccccc-------ccC-CCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH--HhcCc
Q 003059 728 -NVKGIVDK-------SLA-GEDVDI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQM--LEGIT 779 (852)
Q Consensus 728 -~~~~~~d~-------~l~-~~~~~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~--L~~~~ 779 (852)
....+.+. ... ....+. .....+.+++.+|++.+|++||++.++++. ++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00000000 000 001111 112457789999999999999999999875 54443
No 312
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.98 E-value=2.3e-32 Score=290.08 Aligned_cols=246 Identities=23% Similarity=0.340 Sum_probs=194.7
Q ss_pred ccccccceEEEEEECC-CcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 507 LGAGGFGAVYRGVLAN-RTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
||.|+||.||++.... ++.+++|.+.... ...+.+.+|++++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999764 8899999987432 3456788999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc---
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR--- 658 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~--- 658 (852)
.+++... ..+++..+..++.|+++||+|||+ .+++|+||+|+||++++++.++|+|||++.........
T Consensus 81 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 81 ASLLENV-----GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 9999643 258999999999999999999998 89999999999999999999999999998765332110
Q ss_pred --ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 659 --HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 659 --~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
........++..|+|||.+.....+.++||||||++++||++|+.||....... .......+...
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~------ 219 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-------IFQNILNGKIE------ 219 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhcCCcC------
Confidence 112233557889999999988889999999999999999999999996443211 01111111100
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
. +........+.+++.+|++.+|.+||++.++.+.|+
T Consensus 220 ~---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 W---PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred C---CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 000011346678889999999999999977776664
No 313
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=6.2e-32 Score=286.87 Aligned_cols=241 Identities=26% Similarity=0.343 Sum_probs=192.4
Q ss_pred ccccccceEEEEEECC-CcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 507 LGAGGFGAVYRGVLAN-RTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
||.|+||.||+++... ++.+++|.+.... ...+.+.+|++++++++|+||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 7999999999999754 7889999986322 3446789999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++... ..+++..+..++.||+.||+|||+ .+++|+||+|+||+++.++.++|+|||+++...... .
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----~ 148 (262)
T cd05572 81 WTILRDR-----GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----K 148 (262)
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----c
Confidence 9999643 248899999999999999999998 899999999999999999999999999998764321 1
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....++..|++||.+.+..++.++|+||||+++|||++|..||......... . ......+. ... .
T Consensus 149 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~-~~~~~~~~------~~~---~ 214 (262)
T cd05572 149 TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPME----I-YNDILKGN------GKL---E 214 (262)
T ss_pred cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHH----H-HHHHhccC------CCC---C
Confidence 22345788999999998888999999999999999999999999755421110 0 01111000 000 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
.+......+.+++..|++.+|.+||+ ++|+++
T Consensus 215 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 215 FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 11112456788899999999999999 666654
No 314
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.98 E-value=6.1e-32 Score=294.12 Aligned_cols=245 Identities=26% Similarity=0.338 Sum_probs=193.1
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||+|... +++.|++|.+... ....+++.+|+++++.++||||+++++++.+.+..++|||
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 4667789999999999999964 5889999988632 1233568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|++ |+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||++.....
T Consensus 96 ~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 96 YCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred hhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 996 5777777432 2358999999999999999999998 8999999999999999999999999999876543
Q ss_pred CCCcceeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
. ....++..|+|||.+. ...++.++||||||+++|||++|+.||........ .. .......
T Consensus 168 ~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~~-~~~~~~~-- 231 (307)
T cd06607 168 A-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LY-HIAQNDS-- 231 (307)
T ss_pred C-------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------HH-HHhcCCC--
Confidence 2 1245788999999874 45688999999999999999999999864432110 00 0010000
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
+. .........+.+++.+||+.+|++||++.+|+...
T Consensus 232 ---~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 232 ---PT----LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred ---CC----CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 00 01112334678889999999999999999998743
No 315
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=6.6e-32 Score=289.28 Aligned_cols=243 Identities=26% Similarity=0.359 Sum_probs=190.2
Q ss_pred ccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 507 LGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
||+|+||+||++... +++.+++|.+... ......+..|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 799999999999854 5889999998632 22345677899999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++.... ...+++..++.++.|++.||.|||+ .+++||||+|+||++++++.+||+|||++...... ..
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~----~~ 150 (277)
T cd05577 81 KYHIYNVG---EPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG----KK 150 (277)
T ss_pred HHHHHHcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccC----Cc
Confidence 99996543 2358899999999999999999998 89999999999999999999999999998765431 11
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....++..|+|||.+.+..++.++||||||++++||++|+.||......... ..+....... .. .
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~~----~~---~ 216 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-------EELKRRTLEM----AV---E 216 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-------HHHHhccccc----cc---c
Confidence 22345788999999998888999999999999999999999999754331110 0111110000 00 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
.+......+.+++.+|++.+|.+|| ++.++++
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 217 YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 1111233567888999999999999 5555553
No 316
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=5.8e-32 Score=292.16 Aligned_cols=262 Identities=19% Similarity=0.240 Sum_probs=193.3
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV~ 573 (852)
.|.+.+.||+|+||.||+|... +++.+++|.++... .....+.+|+.++.+++||||+++++++... ...++||
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence 4566789999999999999975 57889999987332 2234567899999999999999999998776 8999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||++ ++|.+++.... ..+++..++.++.||+.||+|||+ .+++|+||||+||++++++.+||+|||+++...
T Consensus 86 e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 86 EYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred hhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9997 59999885432 358999999999999999999998 899999999999999999999999999998664
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhH-H-------HHHHHH
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFS-L-------WAYEEF 724 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~-~-------~~~~~~ 724 (852)
... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||............ . ..+..+
T Consensus 158 ~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd07843 158 SPL---KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGF 234 (293)
T ss_pred CCc---cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHh
Confidence 321 112334578899999998764 4689999999999999999999999754322110000 0 000000
Q ss_pred hh------CCcccccccccCCCCCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 725 EK------GNVKGIVDKSLAGEDVDIE-QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 725 ~~------~~~~~~~d~~l~~~~~~~~-~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. ..........+.. ..+.. ....+.+++..|++.+|++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRK-KFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hccchhcccccccccchhhhc-cccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 0000000000000 01111 1344667888999999999999999975
No 317
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.98 E-value=3.3e-32 Score=292.44 Aligned_cols=259 Identities=22% Similarity=0.276 Sum_probs=193.0
Q ss_pred cccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 502 GFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.+.++||.|++|.||+|... +++.|++|++.... .....+.+|++++++++|+|++++++++.+++..++||||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 45678999999999999864 68899999987332 233568899999999999999999999999999999999995
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
++|.+++.... ...+++..++.++.|+++||+|||+ ++++||||+|+||+++.++.++|+|||+++......
T Consensus 82 -~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~- 153 (283)
T cd07835 82 -LDLKKYMDSSP---LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV- 153 (283)
T ss_pred -cCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-
Confidence 68999986433 2358999999999999999999998 899999999999999999999999999997653221
Q ss_pred cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC---------
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG--------- 727 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~--------- 727 (852)
.......++..|+|||.+.+. .++.++||||||+++|||++|+.||........ +.... ......
T Consensus 154 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~ 228 (283)
T cd07835 154 --RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIF-RTLGTPDEDVWPGVT 228 (283)
T ss_pred --cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH-HHhCCCChHHhhhhh
Confidence 111223468899999988654 578999999999999999999999975432111 00000 000000
Q ss_pred CcccccccccCCCCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 728 NVKGIVDKSLAGEDV-----DIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 728 ~~~~~~d~~l~~~~~-----~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.+.+........... .......+.+++.+|++.+|.+||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 229 SLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000000000 0111245778999999999999999999875
No 318
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.98 E-value=5e-32 Score=290.74 Aligned_cols=257 Identities=23% Similarity=0.261 Sum_probs=190.2
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc--ccchHHHHHHHHHhhccc-ccceeeeeeeeccC--ceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI--EQGEKQFRMEVATISSTH-HLNLVRLVGFSSEG--KHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~--~~~~lV~e 574 (852)
|.+.++||+|+||.||+|... +++.||+|++... .........|+.++.++. |+||+++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 356788999999999999964 5788999998743 222334557888898885 99999999999887 89999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|++ ++|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++. +.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 81 LMD-MNLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred cCC-ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 996 5888887543 2358999999999999999999998 89999999999999999 9999999999987643
Q ss_pred CCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHH-----------
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYE----------- 722 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~----------- 722 (852)
... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||......+. ......
T Consensus 152 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~ 224 (282)
T cd07831 152 KPP----YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ---IAKIHDVLGTPDAEVLK 224 (282)
T ss_pred CCC----cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH---HHHHHHHcCCCCHHHHH
Confidence 211 122457889999997654 5678999999999999999999999975432111 111110
Q ss_pred HHhhCCcccccccccCCC---CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 723 EFEKGNVKGIVDKSLAGE---DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~---~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
............+..... .........+.+++.+|++.+|++||++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 225 KFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred hhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000000000000 000122456789999999999999999999875
No 319
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=7.1e-32 Score=293.74 Aligned_cols=266 Identities=19% Similarity=0.227 Sum_probs=190.6
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCc--------
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGK-------- 567 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~-------- 567 (852)
.|.+.++||+|+||.||++... +++.||||.+.... .....+.+|++++++++||||+++++++...+
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 92 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG 92 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence 4777889999999999999964 58899999886322 22345678999999999999999999886544
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
..++||||+. ++|.+++... ...+++..++.++.||+.||+|||+ ++++|+||||+||+++.++.+||+|||
T Consensus 93 ~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 93 SFYLVFEFCE-HDLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred eEEEEEcCCC-cCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCC
Confidence 4599999996 4888877432 2358999999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCc-ceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh
Q 003059 648 LAKLINPKDHR-HRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 648 la~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
++......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||....................
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99866432211 1122334578899999988765 478899999999999999999999975432211111110000000
Q ss_pred -----hCCccccccc-ccCCCC--------CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 -----KGNVKGIVDK-SLAGED--------VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 -----~~~~~~~~d~-~l~~~~--------~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
........+. ...... ........+.+++.+|++.||.+||+++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000000000 000000 00001234568999999999999999999875
No 320
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.98 E-value=2.1e-31 Score=281.27 Aligned_cols=249 Identities=27% Similarity=0.379 Sum_probs=200.3
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV~e 574 (852)
|...+.||+|++|.||+|... +++.|++|.+.... ...+.+.+|++++++++|+||+++++.+.+. ...++|+|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 345678999999999999976 68899999987443 4467889999999999999999999999988 89999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++++|.+++.... .+++..+..++.|++++|+|||+ .+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 82 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 82 YVSGGSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred ecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999996432 68999999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.... .......++..|+|||.+.....+.++||||||+++++|++|+.||....... .... ..... ...
T Consensus 154 ~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~-~~~~~---~~~- 222 (260)
T cd06606 154 IETG-EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-----AALY-KIGSS---GEP- 222 (260)
T ss_pred cccc-ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-----HHHH-hcccc---CCC-
Confidence 3221 01233558889999999998889999999999999999999999997544110 0000 00000 000
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
. ..+......+.+++.+|++.+|.+||++.++++
T Consensus 223 ~-----~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 P-----EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred c-----CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0 111122456778889999999999999999975
No 321
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=5.1e-32 Score=292.74 Aligned_cols=260 Identities=22% Similarity=0.285 Sum_probs=191.1
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.|.+.++||+|++|.||+|... +++.|++|++.... ...+.+.+|++++++++|+||+++++++.+....++||||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEec
Confidence 4667789999999999999965 57899999986332 2345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeecccccccCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKLINP 654 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~ 654 (852)
++ ++|.+++.... ...+++..+..++.||+.||+|||+ ++++||||+|+||+++. ++.+||+|||++.....
T Consensus 83 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 83 LD-LDLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred cc-ccHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 95 58888774332 2335788888999999999999998 89999999999999985 56799999999976532
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.. .......+++.|+|||.+.+. .++.++||||||+++|||++|+.||......+... . ...... .......
T Consensus 156 ~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~--~-~~~~~~-~~~~~~~ 228 (294)
T PLN00009 156 PV---RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELF--K-IFRILG-TPNEETW 228 (294)
T ss_pred Cc---cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--H-HHHHhC-CCChhhc
Confidence 11 111234567899999998764 57899999999999999999999997543221110 0 000000 0000000
Q ss_pred -------c--cccCC-CCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 -------D--KSLAG-EDV-----DIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 -------d--~~l~~-~~~-----~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+ ..... ... .......+.+++.+|++.+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00000 000 0111234678899999999999999999985
No 322
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.98 E-value=1.7e-31 Score=291.99 Aligned_cols=248 Identities=25% Similarity=0.324 Sum_probs=193.7
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+...+.||+|+||.||+++.. ++..||+|.+.... ....++.+|++++++++|+|++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 445678999999999999964 57899999986321 2235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
++ |+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 107 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 96 5787777532 3358999999999999999999998 89999999999999999999999999998754321
Q ss_pred CCcceeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
....++..|+|||.+. ...++.++||||||+++|||++|+.||........ .........
T Consensus 179 -------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------~~~~~~~~~--- 241 (317)
T cd06635 179 -------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-------LYHIAQNES--- 241 (317)
T ss_pred -------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-------HHHHHhccC---
Confidence 2345788999999974 45688999999999999999999999864321110 001111100
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
+. .........+.+++.+|++.+|.+||++.+|++.+....
T Consensus 242 --~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 242 --PT----LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred --CC----CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 00 111122335678889999999999999999998665443
No 323
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=8.1e-32 Score=284.56 Aligned_cols=248 Identities=25% Similarity=0.361 Sum_probs=200.4
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.++||+|+||.||++... +++.+++|.+... .....++.+|++++++++|+||+++++++.+....++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 556789999999999999854 5788999998742 233456788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++..... ....+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||+++.....
T Consensus 82 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 82 PFGDLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred CCCCHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999865322 23568999999999999999999998 89999999999999999999999999999876542
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
......++..|+|||.+.+..++.++|+||||+++|||++|+.||....... + ..........
T Consensus 157 ----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~----~~~~~~~~~~------ 219 (256)
T cd08530 157 ----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---L----RYKVQRGKYP------ 219 (256)
T ss_pred ----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H----HHHHhcCCCC------
Confidence 1122457889999999999999999999999999999999999997543211 0 0111111111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+......+.+++.+|++.+|++||++.++++.
T Consensus 220 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 220 ----PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ----CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1122334567889999999999999999999763
No 324
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.98 E-value=1.4e-31 Score=297.24 Aligned_cols=262 Identities=21% Similarity=0.262 Sum_probs=193.4
Q ss_pred HhcccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC------c
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG------K 567 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~ 567 (852)
...|...+.||+|+||.||++... +++.||+|.+... .....++.+|++++++++|+||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 356777889999999999999964 6889999998632 22345677899999999999999999987643 3
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
..++||||+. ++|.+++.. .++...+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCc
Confidence 5799999995 588887732 27888899999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhh---------HH
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKF---------SL 718 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l---------~~ 718 (852)
+++...... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...+....... ..
T Consensus 164 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 164 LARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239 (353)
T ss_pred cceeCCCCC----CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 998654321 12234578899999999999999999999999999999999999965432110000 00
Q ss_pred H-------HHHHHhhC------CcccccccccCC---CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 719 W-------AYEEFEKG------NVKGIVDKSLAG---EDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 719 ~-------~~~~~~~~------~~~~~~d~~l~~---~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+ ........ ....+....+.. ..........+.+++.+|++.||.+||++.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00000000 000000000000 00011224456789999999999999999999853
No 325
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=6e-32 Score=290.67 Aligned_cols=260 Identities=23% Similarity=0.275 Sum_probs=194.5
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV~e 574 (852)
|.+.++||+|+||.||+|+.. +++.+++|++... ......+.+|++++++++|+|++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 345688999999999999975 4789999999844 23345688999999999999999999999888 89999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++ +|.+++... ...+++..++.++.||++||+|||+ .+++|+||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 81 YMDH-DLTGLLDSP----EVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred cccc-cHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 9975 898888543 2368999999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhC------
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKG------ 727 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~------ 727 (852)
... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .........
T Consensus 153 ~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~ 227 (287)
T cd07840 153 RNS--ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE---KIFELCGSPTDENWP 227 (287)
T ss_pred CCc--ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHHhCCCchhhcc
Confidence 321 12233456788999998765 467899999999999999999999997544221110 000000000
Q ss_pred Ccccc-cccccCCC-C--------CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 728 NVKGI-VDKSLAGE-D--------VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 728 ~~~~~-~d~~l~~~-~--------~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+ ........ . ........+.+++.+|++.+|.+||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 00000000 0 00001346788999999999999999999875
No 326
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=1.5e-31 Score=284.44 Aligned_cols=249 Identities=24% Similarity=0.280 Sum_probs=191.7
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc------ccchHHHHHHHHHhhcccccceeeeeeeeccC--ceee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI------EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRL 570 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~------~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~ 570 (852)
.|.+.+.||+|+||.||+|... ++..|++|.+... ......+++|++++++++|+||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 3567789999999999999964 5889999987521 22335788999999999999999999998654 4688
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+|+||+++++|.+++... ..+++....+++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+++
T Consensus 83 ~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 999999999999998543 247888899999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
................++..|+|||.+.+..++.++||||||++++||++|+.||....... . ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~-----~~~~~~~~~~ 227 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--A-----IFKIATQPTK 227 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--H-----HHHHHcCCCC
Confidence 65432111112233458899999999998889999999999999999999999996432110 0 0011000000
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 731 GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+ ..+......+.+++.+|++ +|.+||+..+++.
T Consensus 228 ----~-----~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 ----P-----MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----C-----CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1 1122223456777888998 5799999998764
No 327
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=1.5e-31 Score=294.95 Aligned_cols=266 Identities=24% Similarity=0.360 Sum_probs=194.7
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecC---cccchHHHHHHHHHhhcc-cccceeeeeeeeccC--ceeeE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEG---IEQGEKQFRMEVATISST-HHLNLVRLVGFSSEG--KHRLL 571 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~---~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~--~~~~l 571 (852)
..|.+.+.||+|+||.||+|... +++.+++|++.. .......+.+|+.++.++ +|+||+++++++... ...++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 45667789999999999999975 578899998853 223345677899999999 999999999988653 46899
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
||||++ ++|..++... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 v~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 87 VFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred Eecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 999997 5998888432 57889999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCc--ceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------
Q 003059 652 INPKDHR--HRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA-------- 720 (852)
Q Consensus 652 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~-------- 720 (852)
....... ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 6433211 112234568899999998754 46789999999999999999999999654322111000000
Q ss_pred HHHHhhCCcccccccccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 721 YEEFEKGNVKGIVDKSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
...+.......+++........... ....+.+++.+|++.+|.+||++.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000011111111000011111 23457889999999999999999999864
No 328
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=1.6e-31 Score=293.61 Aligned_cols=260 Identities=21% Similarity=0.268 Sum_probs=189.9
Q ss_pred cccccc--ccceEEEEEE-CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAG--GFGAVYRGVL-ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G--~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+| +||+||++.. ..++.||+|.+.... ...+.+++|+.+++.++||||+++++++..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 457777 8999999996 468999999987332 2346788999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 84 GSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred CCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 99999986542 2348889999999999999999998 89999999999999999999999999866443221111
Q ss_pred cee----eeeecCCCCCCChhhhhcC--CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH-----------
Q 003059 659 HRT----LTSVRGTRGYLAPEWLANL--PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY----------- 721 (852)
Q Consensus 659 ~~~----~~~~~gt~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~----------- 721 (852)
... .....++..|+|||++.+. .++.++||||||+++|||++|+.||........ ......
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCCccccc
Confidence 100 0112345679999999764 478999999999999999999999975422110 000000
Q ss_pred -----HH-------Hhh----CCc-----ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 722 -----EE-------FEK----GNV-----KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 722 -----~~-------~~~----~~~-----~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.. ... ... ..+.+..+.. .........+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRT-PSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccc-hhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00 000 000 0000111111 112233456789999999999999999999974
No 329
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=1.3e-31 Score=287.79 Aligned_cols=262 Identities=25% Similarity=0.324 Sum_probs=194.7
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCccc--chHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQ--GEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|+||.||+|+.. +++.|++|++..... ......+|+..+.+++ |+||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 356788999999999999975 478899999874332 2334567999999999 999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
+++|.+++.... ...+++..+..++.|++.+|.|||+ .+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 81 -EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred -CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 889999886543 3468999999999999999999998 899999999999999999999999999998654321
Q ss_pred CcceeeeeecCCCCCCChhhhh-cCCCCCCccchhhhHHHHHHHhCCccccccccccchhh----------HHHHHHHHh
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLA-NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKF----------SLWAYEEFE 725 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l----------~~~~~~~~~ 725 (852)
......++..|+|||.+. ...++.++||||||++++||++|+.||......+...- ..|......
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 154 ----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred ----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 112345788999999875 44678999999999999999999999965532211100 000000000
Q ss_pred hCCcccccccccCCC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 726 KGNVKGIVDKSLAGE--DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~--~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.......+....... .........+.+++.+|++.+|++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 001110000000000 000011356789999999999999999999875
No 330
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=1e-31 Score=290.06 Aligned_cols=242 Identities=23% Similarity=0.356 Sum_probs=192.5
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecC-cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHH
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEG-IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLD 582 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 582 (852)
.+||+|+||.||++.. .+++.||+|++.. .......+.+|+.++++++|+||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999986 4688999999863 3334567889999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceee
Q 003059 583 NFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTL 662 (852)
Q Consensus 583 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 662 (852)
+++.. ..+++..+..++.|++.+|+|||+ .+++||||+|+||++++++.++|+|||++....... ...
T Consensus 106 ~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---~~~ 173 (292)
T cd06657 106 DIVTH------TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRR 173 (292)
T ss_pred HHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc---ccc
Confidence 98742 247889999999999999999998 899999999999999999999999999987654321 112
Q ss_pred eeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCC
Q 003059 663 TSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDV 742 (852)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (852)
....++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...... .....+..
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-------~~~~~~-----~~~~~~~~--- 238 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-------MKMIRD-----NLPPKLKN--- 238 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHh-----hCCcccCC---
Confidence 334588999999999888899999999999999999999999864322110 001110 01111100
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 743 DIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 743 ~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.......+.+++.+|++.+|.+||++.++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0011224567788899999999999999886
No 331
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=7.9e-32 Score=289.23 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=196.2
Q ss_pred cccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 502 GFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.+.+.||+|++|.||++... +++.+++|++.... .....+..|++++++++|+||+++++++..+...++|+||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 45678999999999999864 68889999987432 235678899999999999999999999999999999999997
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+ +|.+++... ...+++..+..++.|+++||.|||+ .+|+|+||||+||++++++.+||+|||.+.......
T Consensus 82 ~-~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 82 T-DLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred C-CHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 5 888888543 2368999999999999999999998 899999999999999999999999999998765432
Q ss_pred cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC---ccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN---VKGIV 733 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~ 733 (852)
.......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+.... ......... .....
T Consensus 153 --~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 153 --RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK---IFRTLGTPDPEVWPKFT 227 (283)
T ss_pred --ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCchHhcccch
Confidence 122234578889999999876 789999999999999999999999965432211100 000000000 00000
Q ss_pred c------cccC-CCCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 D------KSLA-GEDV-----DIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 d------~~l~-~~~~-----~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+ .... .... .......+.+++..|++.||.+||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 228 SLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 0000 0011 1122356789999999999999999999875
No 332
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=270.25 Aligned_cols=245 Identities=22% Similarity=0.373 Sum_probs=188.2
Q ss_pred cccccccccceEEEEEECC-CcEEEEEEecCc--ccchHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEeecCCC
Q 003059 504 KDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGI--EQGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
...||.|..|.|++...+. +..+|||.+... .+..+++...+.++.+-+ .|+||+.+|||..+...++.||.|. .
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~ 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-T 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-H
Confidence 4569999999999999654 888999999843 344567788888876664 9999999999999999999999983 3
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
-++.+|..- ..++++...=++...+.+||.||.+ +++|||||+||+|||+|+.|++||+|||++-.+-. .
T Consensus 176 C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd----S 245 (391)
T KOG0983|consen 176 CAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD----S 245 (391)
T ss_pred HHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeec----c
Confidence 455655432 3458888888999999999999998 48999999999999999999999999999976532 1
Q ss_pred eeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 660 RTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
...+...|.+.|||||.+. ...|+.++||||||++|+||.||+.||.....+-+ +...+.. -..+.
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe------~ltkvln-----~ePP~ 314 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE------VLTKVLN-----EEPPL 314 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH------HHHHHHh-----cCCCC
Confidence 2334567999999999985 34688899999999999999999999986433211 1111111 11133
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
|.+.. .-...++++...|++.|+.+||.+.++++
T Consensus 315 L~~~~---gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 315 LPGHM---GFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCccc---CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 33211 02235667777799999999999998875
No 333
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-33 Score=276.45 Aligned_cols=262 Identities=25% Similarity=0.353 Sum_probs=196.6
Q ss_pred cccCHHHHHHhcccccccccccccceEEEEEE-CCCcEEEEEEecC--cccchHHHHHHHHHhhc-ccccceeeeeeeec
Q 003059 489 VQFSYKELQRSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG--IEQGEKQFRMEVATISS-THHLNLVRLVGFSS 564 (852)
Q Consensus 489 ~~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~--~~~~~~~f~~E~~~l~~-l~h~niv~l~g~~~ 564 (852)
..|+-+.|+.. ..||.|+||+|+|-.. +.++..|||++.. .....+++..|.+...+ -+.||||+++|.+.
T Consensus 59 ~~F~~~~Lqdl-----g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F 133 (361)
T KOG1006|consen 59 HTFTSDNLQDL-----GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF 133 (361)
T ss_pred cccccchHHHH-----HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh
Confidence 34554444432 4699999999999885 4689999999983 34556788889887655 47999999999999
Q ss_pred cCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEe
Q 003059 565 EGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVS 644 (852)
Q Consensus 565 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~ 644 (852)
.++..++.||.| .-||+.+-..-.......++++..-+|......||.||.++ ..|||||+||+|||||..|.+||+
T Consensus 134 ~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLC 210 (361)
T KOG1006|consen 134 SEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLC 210 (361)
T ss_pred cCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeee
Confidence 999999999999 56887765432222344688888888999999999999985 679999999999999999999999
Q ss_pred ecccccccCCCCCcceeeeeecCCCCCCChhhhhc--CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHH
Q 003059 645 DFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN--LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYE 722 (852)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 722 (852)
|||++-.+.. ....+...|...|||||.+.. ..++.++||||||++|+|+.||+.||+.... +.....
T Consensus 211 DFGIcGqLv~----SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s------vfeql~ 280 (361)
T KOG1006|consen 211 DFGICGQLVD----SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS------VFEQLC 280 (361)
T ss_pred cccchHhHHH----HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH------HHHHHH
Confidence 9999976532 122244568899999999853 3588999999999999999999999975432 111112
Q ss_pred HHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 723 EFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+....+. ......+....++.++-.|+.+|..+||.+.++.+
T Consensus 281 ~Vv~gdpp~l~-----~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 281 QVVIGDPPILL-----FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHcCCCCeec-----CcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 22222222211 11222334556777888899999999999998875
No 334
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=1.9e-31 Score=289.44 Aligned_cols=262 Identities=23% Similarity=0.288 Sum_probs=193.1
Q ss_pred HHHhcccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc----
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK---- 567 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~---- 567 (852)
.....|.+.++||+|+||.||+|... +++.|++|+++.. ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34456777889999999999999975 4788999998732 223356788999999999999999999887654
Q ss_pred ------eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCce
Q 003059 568 ------HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNA 641 (852)
Q Consensus 568 ------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 641 (852)
..++|+||+++ +|..++... ...+++..+..++.||+.||+|||+ .+|+|+||||+||++++++.+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcE
Confidence 78999999976 777776432 2358999999999999999999998 899999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH
Q 003059 642 KVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA 720 (852)
Q Consensus 642 kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 720 (852)
||+|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ +...
T Consensus 156 kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~--~~~~- 230 (302)
T cd07864 156 KLADFGLARLYNSEES--RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ--LELI- 230 (302)
T ss_pred EeCcccccccccCCcc--cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHH-
Confidence 9999999987644321 11122345778999998865 3578999999999999999999999975432111 1000
Q ss_pred HHHHhhCCccc----c--------ccc------ccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 721 YEEFEKGNVKG----I--------VDK------SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 721 ~~~~~~~~~~~----~--------~d~------~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.... ...... + .+. .+.. ... .....+.+++.+|++.+|.+||++.+|++
T Consensus 231 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 231 SRLC-GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLRE-EFS-FIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHh-CCCChhhcccccccccccccccccccccchhh-hcC-CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 000000 0 000 0000 000 01235678899999999999999999875
No 335
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=8.9e-32 Score=291.20 Aligned_cols=250 Identities=22% Similarity=0.362 Sum_probs=190.1
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCcc--cchHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIE--QGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.+.+.++||+|+||.||+|...+ ++.||||+++... ....++..|+.++.+.. |+||+++++++.+....++||||
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 95 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMEL 95 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeec
Confidence 45677899999999999999865 8899999997432 23455677887776665 99999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
++ ++|.+++... ...+++..+..++.||+.||+|||+. .+|+||||+|+||++++++.+||+|||++..+...
T Consensus 96 ~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 96 MS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred cC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 85 4777776432 23689999999999999999999962 48999999999999999999999999998765322
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCC----CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLP----ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
. ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... . ..........
T Consensus 169 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~-----~~~~~~~~~~-- 236 (296)
T cd06618 169 K----AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-E-----VLTKILQEEP-- 236 (296)
T ss_pred C----cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-H-----HHHHHhcCCC--
Confidence 1 112234778999999987654 7889999999999999999999996432110 0 0111111110
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+.+. ........+.+++.+|++.||.+||++.++++.
T Consensus 237 ---~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 237 ---PSLP---PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ---CCCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0110 000123457788899999999999999999864
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=1.5e-31 Score=288.11 Aligned_cols=253 Identities=22% Similarity=0.249 Sum_probs=195.4
Q ss_pred ccccccccccccceEEEEEE----CCCcEEEEEEecCc-----ccchHHHHHHHHHhhcc-cccceeeeeeeeccCceee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL----ANRTVVAVKQLEGI-----EQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~-----~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 570 (852)
|.+.+.||+|+||.||+++. .+++.||||.+... ....+.+..|++++.++ +|+||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 45678899999999999984 35678999998632 12335688999999999 5999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++++|.+++... ..+++..+..++.|++++|.|||+ .+++||||||+||+++.++.++|+|||+++
T Consensus 82 lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 82 LILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 999999999999998542 348889999999999999999998 899999999999999999999999999988
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcCC--CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANLP--ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
.+..... .......++..|+|||.+.+.. .+.++||||||+++|||++|+.||......... ..... ....
T Consensus 154 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~~~~-~~~~-- 226 (288)
T cd05583 154 EFLAEEE--ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ--SEISR-RILK-- 226 (288)
T ss_pred ccccccc--cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH--HHHHH-HHHc--
Confidence 6543211 1112345788999999987765 788999999999999999999999643211110 01110 0000
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhc
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEG 777 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~ 777 (852)
. .. ..+......+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 227 --~--~~-----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 --S--KP-----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --c--CC-----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 00 0111112345678889999999999999999887764
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1e-31 Score=292.58 Aligned_cols=262 Identities=22% Similarity=0.299 Sum_probs=191.7
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC--ceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG--KHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV~ 573 (852)
.|.+.++||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.+++|+||+++++++.+. +..++||
T Consensus 8 ~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (309)
T cd07845 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVM 87 (309)
T ss_pred ceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEE
Confidence 4667789999999999999974 58899999987322 1233567899999999999999999998654 5689999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+. ++|.+++... ...+++..+..++.||++||+|||+ .+++||||||+||++++++.+||+|||+++...
T Consensus 88 e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 88 EYCE-QDLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred ecCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9996 4888888543 2458999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHH--------HHHHH
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLW--------AYEEF 724 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~--------~~~~~ 724 (852)
... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............- .+...
T Consensus 160 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 160 LPA---KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred Ccc---CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 321 11222345788999999875 4578999999999999999999999975432211100000 00000
Q ss_pred hhCCcccccccccCCCCC-CH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 725 EKGNVKGIVDKSLAGEDV-DI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~-~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
........+ .+..... .. .....+.+++.+|++.||++||++.++++.
T Consensus 237 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 237 SDLPLVGKF--TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hcccccccc--cccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000 0000000 00 013345688999999999999999999853
No 338
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-32 Score=293.68 Aligned_cols=248 Identities=21% Similarity=0.365 Sum_probs=196.1
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEec-CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLE-GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~-~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+++.-.||.|+||.||+++.++ +-..|.|.+. ......++|.-||+||+...||+||+|++.|..++..+|+.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4455679999999999999665 4445677777 5556668899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|-.+..+..- ++.|...++.-+++|++.||.|||+ .+|||||||+.|||+.-+|.++|+|||.+-.... .
T Consensus 114 GAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~---t 183 (1187)
T KOG0579|consen 114 GAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS---T 183 (1187)
T ss_pred chHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchh---H
Confidence 9999887543 4579999999999999999999999 8999999999999999999999999998754321 1
Q ss_pred ceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
......+.||+.|||||+.. ..+|+.++||||||++|.||..+.+|-..... ..+.-.+.......++
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-------MRVllKiaKSePPTLl 256 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSEPPTLL 256 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-------HHHHHHHhhcCCCccc
Confidence 12234577999999999874 56899999999999999999999998643221 1111111111111111
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
-+......+-++..+|+..||..||+++++++
T Consensus 257 --------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 257 --------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred --------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 12233456778888899999999999999875
No 339
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=2.2e-31 Score=293.24 Aligned_cols=267 Identities=21% Similarity=0.324 Sum_probs=195.1
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeecc----Cceee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSE----GKHRL 570 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~----~~~~~ 570 (852)
..|.+.+.||+|+||.||+|... +++.|++|++... ......+.+|+.++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 35667789999999999999964 5889999998743 2334667889999999999999999998753 35789
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+. ++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 85 lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccce
Confidence 9999995 6898888532 348999999999999999999998 899999999999999999999999999997
Q ss_pred ccCCCCCc-ceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHH--------H
Q 003059 651 LINPKDHR-HRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLW--------A 720 (852)
Q Consensus 651 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~--------~ 720 (852)
........ ........++..|+|||.+.. ..++.++||||||+++|||++|+.||.............. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 65432211 111234568889999999865 4688999999999999999999999965432111000000 0
Q ss_pred HHHHhhCCcccccccccCCCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 721 YEEFEKGNVKGIVDKSLAGEDVDI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
........+....+..-.....+. .....+.+++.+|++.+|.+||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000011111111000001111 123567889999999999999999998863
No 340
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=3.2e-31 Score=289.36 Aligned_cols=256 Identities=20% Similarity=0.225 Sum_probs=188.9
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCC
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGS 580 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gs 580 (852)
.+.+|.|+++.||++.. +++.||||++... ....+.+..|++++++++|+||+++++++.+.+..+++|||+++++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455566666666554 6788999998743 3345679999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc--
Q 003059 581 LDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR-- 658 (852)
Q Consensus 581 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~-- 658 (852)
|.+++.... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||.+.........
T Consensus 86 l~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTHF---PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999996542 2347888899999999999999998 89999999999999999999999999988755322111
Q ss_pred --ceeeeeecCCCCCCChhhhhcC--CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc-
Q 003059 659 --HRTLTSVRGTRGYLAPEWLANL--PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV- 733 (852)
Q Consensus 659 --~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 733 (852)
........++..|+|||.+... .++.++||||||+++|||++|+.||....... .+. ... .+.....+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~----~~~-~~~~~~~~~ 232 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLL----EKV-RGTVPCLLD 232 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH----HHH-hccCccccc
Confidence 1111234577889999998763 57899999999999999999999997532211 000 000 00000000
Q ss_pred -------------------ccccC---CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 -------------------DKSLA---GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 -------------------d~~l~---~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.... ...........+.+++.+||+.||++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 233 KSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00000 00111122346778999999999999999999986
No 341
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=4.4e-31 Score=278.46 Aligned_cols=245 Identities=24% Similarity=0.391 Sum_probs=198.1
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|++|.||+++.. +++.|++|.+.... ...+.+.+|++++.+++|+|++++++++.+.+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 556789999999999999865 57889999997543 34567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++... ..+++..+..++.|++.+|.|||+ .+|+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 82 ENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999998543 358999999999999999999998 899999999999999999999999999998765432
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.. .....++..|+|||.+.+...+.++|||+||++++||++|+.||...... ...+. ...... .
T Consensus 154 ~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~---~~~~~~-----~- 217 (254)
T cd06627 154 KD---DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFR---IVQDDH-----P- 217 (254)
T ss_pred cc---ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHH---HhccCC-----C-
Confidence 21 23345788999999998888899999999999999999999999643211 00011 110000 0
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+......+.+++.+|++.+|++||++.+++.
T Consensus 218 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 ----PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ----CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111112345678889999999999999999874
No 342
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=4.4e-31 Score=280.01 Aligned_cols=243 Identities=22% Similarity=0.276 Sum_probs=187.1
Q ss_pred ccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHh-hcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATI-SSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l-~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
+.||+|+||.||+|... +++.||+|.+.... .....+..|..++ ...+|+|++++++++.+++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999864 57899999987432 1223344555444 455899999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 9999999543 348889999999999999999998 8999999999999999999999999999875432
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
.....++..|+|||.+.+..++.++||||||+++|||++|..||....... ........... ...
T Consensus 150 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~--~~~--- 214 (260)
T cd05611 150 ---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-------VFDNILSRRIN--WPE--- 214 (260)
T ss_pred ---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHhcccC--CCC---
Confidence 123457889999999988889999999999999999999999996443211 11111111110 000
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
.........+.+++.+|++.+|++||++.++.+.|+
T Consensus 215 --~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 215 --EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred --cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 011112345778899999999999998876666553
No 343
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-33 Score=322.00 Aligned_cols=245 Identities=29% Similarity=0.424 Sum_probs=192.5
Q ss_pred cccccccccceEEEEE-ECCCcEEEEEEec---CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 504 KDKLGAGGFGAVYRGV-LANRTVVAVKQLE---GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~---~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
..+||.|.||.||.+. .++|...|+|-+. ..........+|+.++..++|||+|+.+|+-.+++..+|.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 4589999999999999 5668888999876 22344567789999999999999999999999999999999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC-Cc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD-HR 658 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~-~~ 658 (852)
+|.+.+... ..+++.....+..|++.|++|||+ ++||||||||.||+|+.+|.+|++|||.|..+.... ..
T Consensus 1320 sLa~ll~~g-----ri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1320 SLASLLEHG-----RIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred cHHHHHHhc-----chhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 999999543 335555666788999999999999 899999999999999999999999999999876542 12
Q ss_pred ceeeeeecCCCCCCChhhhhcCC---CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHH-HhhCCcccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLP---ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEE-FEKGNVKGIVD 734 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~d 734 (852)
........||+.|||||++.+.. -..+.||||+|||++||+||++||...+. .|+..- ...+...
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~V~~gh~P---- 1460 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYHVAAGHKP---- 1460 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhHHhccCCC----
Confidence 22234567999999999997543 45689999999999999999999974432 222211 1111111
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+..-...-.+++.+|++.||++|.++.|+++
T Consensus 1461 ------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1461 ------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 111222234567888999999999988877665
No 344
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=3.3e-31 Score=285.82 Aligned_cols=249 Identities=22% Similarity=0.256 Sum_probs=191.2
Q ss_pred ccccccccccccceEEEEEE----CCCcEEEEEEecCcc-----cchHHHHHHHHHhhcc-cccceeeeeeeeccCceee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL----ANRTVVAVKQLEGIE-----QGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRL 570 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~-----~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 570 (852)
|.+.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++.++ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 45678999999999999985 367889999987321 2346678899999999 5999999999999999999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+++++|.+++... ..+++..+..++.|+++||.|||+ .+++||||||+|||+++++.+||+|||+++
T Consensus 82 lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 82 LILDYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999643 347888899999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhcC--CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLANL--PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
....... .......|+..|+|||.+... .++.++||||||+++|||++|+.||........ ...........
T Consensus 154 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~-- 227 (290)
T cd05613 154 EFHEDEV--ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILKS-- 227 (290)
T ss_pred ecccccc--cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhcc--
Confidence 6543211 122235588999999998753 467899999999999999999999964322111 11111110000
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
.+ +.+......+.+++.+|++.+|++|| +..+++.
T Consensus 228 -----~~-----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 228 -----EP-----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -----CC-----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 00 11111223566888899999999997 5566554
No 345
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=4.7e-31 Score=291.57 Aligned_cols=264 Identities=21% Similarity=0.348 Sum_probs=190.4
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC------cee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG------KHR 569 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~~~ 569 (852)
.|...+.||+|+||.||+|.. .+++.||+|++... ......+.+|+.++++++|+||+++++++... ...
T Consensus 16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 95 (342)
T cd07879 16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDF 95 (342)
T ss_pred ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceE
Confidence 345567899999999999996 46889999998632 22345688999999999999999999988654 356
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++|+||+.. +|..++ ...+++..+..++.|++.||+|||+ .+++||||||+|||++.++.+||+|||++
T Consensus 96 ~lv~e~~~~-~l~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 96 YLVMPYMQT-DLQKIM-------GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred EEEeccccc-CHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 999999964 777665 2348889999999999999999998 89999999999999999999999999998
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA-------- 720 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~-------- 720 (852)
+..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............
T Consensus 165 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 165 RHADAE------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEF 238 (342)
T ss_pred cCCCCC------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 765321 123356788999999876 46889999999999999999999999754321100000000
Q ss_pred HHHHhhCCccccccc--ccCCCCCC---HHHHHHHHHHHHhccccCCCCCCCHHHHHH--HHhcCcc
Q 003059 721 YEEFEKGNVKGIVDK--SLAGEDVD---IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ--MLEGITE 780 (852)
Q Consensus 721 ~~~~~~~~~~~~~d~--~l~~~~~~---~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~--~L~~~~~ 780 (852)
............+.. ........ ......+.+++.+|++.||++||++.++++ .++..+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000000000000000 00000000 011234678999999999999999999984 4666554
No 346
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=3.6e-31 Score=279.51 Aligned_cols=249 Identities=25% Similarity=0.373 Sum_probs=200.6
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
|.+.+.||+|+||.||++... ++..+++|++.... ...+++..|++++++++|+|++++++.+..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 456788999999999999965 57889999987432 34567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
++++|.+++..... ....+++..+..++.+++.||.|||+ .+++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 82 DGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred CCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999965431 23568999999999999999999998 799999999999999999999999999998764422
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.......+++.|+|||.+....++.++||||||+++++|++|+.||....... ............
T Consensus 158 ---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~----- 222 (258)
T cd08215 158 ---DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-------LALKILKGQYPP----- 222 (258)
T ss_pred ---ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-------HHHHHhcCCCCC-----
Confidence 12233467889999999998899999999999999999999999996443110 011111111111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.+......+.+++.+|+..+|.+||++.++++
T Consensus 223 -----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 223 -----IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11122245678888999999999999999875
No 347
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=4.1e-31 Score=283.29 Aligned_cols=240 Identities=24% Similarity=0.291 Sum_probs=184.2
Q ss_pred cccccccceEEEEEE-CCCcEEEEEEecCcc----cchHHHHHHHHH---hhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 506 KLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE----QGEKQFRMEVAT---ISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~f~~E~~~---l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.||+|+||.||++.. .+++.||+|.+.... .....+..|..+ ++...||||+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999986 457899999886322 222234444433 444579999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+++|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~- 151 (278)
T cd05606 81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (278)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC-
Confidence 99999988532 358999999999999999999998 899999999999999999999999999987653221
Q ss_pred cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.....|+..|+|||.+.+. .++.++||||||+++|||++|+.||........... ..... .....
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~------~~~~~ 217 (278)
T cd05606 152 ----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMTL------TMAVE 217 (278)
T ss_pred ----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH----HHHhh------ccCCC
Confidence 1234689999999999754 689999999999999999999999975432211110 00000 00111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRP-----MMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP-----t~~ev~~ 773 (852)
+. ......+.+++.+|+..+|.+|| ++.++++
T Consensus 218 ~~-----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 218 LP-----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CC-----CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 11 11134677788899999999999 8889875
No 348
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=3.8e-31 Score=284.57 Aligned_cols=259 Identities=24% Similarity=0.301 Sum_probs=191.5
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEecCccc---chHHHHHHHHHhhcc---cccceeeeeeeeccCce-----
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQ---GEKQFRMEVATISST---HHLNLVRLVGFSSEGKH----- 568 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~---~~~~f~~E~~~l~~l---~h~niv~l~g~~~~~~~----- 568 (852)
|.+.+.||+|+||.||+|+... ++.||+|++..... ....+.+|+.++.++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 3456789999999999999764 88999999973222 234566788777655 59999999999988776
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.+++|||++ ++|.+++.... ...+++..+..++.|+++||+|||+ .+++|+||+|+||++++++.+||+|||+
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCc
Confidence 999999996 48999886432 2358999999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||......+ .+... ........
T Consensus 154 ~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~--~~~~~-~~~~~~~~ 226 (287)
T cd07838 154 ARIYSFEM----ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD--QLDKI-FDVIGLPS 226 (287)
T ss_pred ceeccCCc----ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH--HHHHH-HHHcCCCC
Confidence 98764321 1122347889999999999999999999999999999999999987543221 11111 01000000
Q ss_pred c----------ccccccccCCC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 729 V----------KGIVDKSLAGE--DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 729 ~----------~~~~d~~l~~~--~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
. ........... ....+....+.+++.+|++.||.+||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 00000000000 001122355678899999999999999999874
No 349
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.1e-31 Score=295.38 Aligned_cols=271 Identities=22% Similarity=0.331 Sum_probs=201.1
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc-----eeeE
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK-----HRLL 571 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~l 571 (852)
|.+.++||+|+||.||++.... ++.|++|++... ....+.+.+|+++++.++|+||+++++++.... ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 5677899999999999999754 889999998743 334567899999999999999999999988775 7899
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
||||++ ++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 82 v~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 82 VTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred Eecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 999997 5888888532 268999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHH-----HH--
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAY-----EE-- 723 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-----~~-- 723 (852)
...............++..|+|||.+.+. .++.++||||||+++|+|++|+.||................ ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 65432111223344578899999999887 88999999999999999999999997654321110000000 00
Q ss_pred -HhhCCcccccccccCCCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH--HhcCcc
Q 003059 724 -FEKGNVKGIVDKSLAGEDVDI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQM--LEGITE 780 (852)
Q Consensus 724 -~~~~~~~~~~d~~l~~~~~~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~--L~~~~~ 780 (852)
.........+...-.....+. .....+.+++.+||+.+|.+||++.++++. ++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 000000001100000001111 112456788999999999999999999973 555543
No 350
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=1.4e-31 Score=295.17 Aligned_cols=267 Identities=22% Similarity=0.290 Sum_probs=194.6
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccC-----ceee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG-----KHRL 570 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~ 570 (852)
.|.+.+.||+|+||.||++.. .+++.||||.+... ......+..|+.++..++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 466678999999999999985 45889999998732 23345677899999999999999999987654 3579
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+||||+. ++|.+++... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+++
T Consensus 86 lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 86 IVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 9999995 6898888532 358899999999999999999998 899999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------H
Q 003059 651 LINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA--------Y 721 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~ 721 (852)
...... .......++..|+|||.+.. ..++.++||||||+++|||++|+.||............... .
T Consensus 157 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 157 TTSEKG---DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred ccCCCc---ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 664321 11233457889999998865 46889999999999999999999999754321110000000 0
Q ss_pred HHHhhCCcccccccccCCCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH--HhcC
Q 003059 722 EEFEKGNVKGIVDKSLAGEDVD-----IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM--LEGI 778 (852)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~-----~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~--L~~~ 778 (852)
...........+.......... ......+.+++.+|++.+|++||+++++++. ++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0000000000000000000000 1123456789999999999999999999865 5544
No 351
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.3e-31 Score=291.88 Aligned_cols=246 Identities=25% Similarity=0.359 Sum_probs=197.4
Q ss_pred HHhcccccccccccccceEEEEEE-CCCcEEEEEEecCccc---chHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQ---GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
...-|.+...||+|.|+.|..|+. ..+..||+|.+.+... ..+.+.+|+++|..++|||||+++.+.......|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 334566778999999999999985 4588999999985432 234588999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+.+|.+.+||.++.+ ........++.|+.++++|||+ +.|||||||++||||+.+.++||+|||++..+
T Consensus 134 ~eya~~ge~~~yl~~~gr-----~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR-----MKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred EEeccCchhHHHHHhccc-----chhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceee
Confidence 999999999999987654 4447778899999999999999 89999999999999999999999999999887
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCC-CCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPI-TSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
.. ........|++.|.|||++.+.++ ++++|+||+|++||-|+.|..||++..- ++
T Consensus 206 ~~----~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-------------------k~ 262 (596)
T KOG0586|consen 206 DY----GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-------------------KE 262 (596)
T ss_pred cc----cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------------------cc
Confidence 53 334566789999999999998876 5899999999999999999999985431 11
Q ss_pred ccccccCCC-CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 732 IVDKSLAGE-DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 732 ~~d~~l~~~-~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+-++.+.+. ..+.--...+-+++.+.+..+|.+|+++.+|.+
T Consensus 263 Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 263 LRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 111111110 111111223445666678888999988888765
No 352
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=3.9e-31 Score=280.39 Aligned_cols=249 Identities=24% Similarity=0.303 Sum_probs=192.2
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecC------cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEG------IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~------~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 572 (852)
+|.+.++||+|+||.||++.... +..+++|.++. ......++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 36678899999999999998643 34455555542 122334577899999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
|||+++++|.+++..... ....+++..++.++.|+++||.|||+ .+++|+||||+||++++ +.+||+|||+++..
T Consensus 81 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeec
Confidence 999999999999864322 24568999999999999999999998 89999999999999975 56999999998776
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccc
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGI 732 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (852)
..... ......++..|+|||.+.+..++.++|+||||+++|+|++|..||...... ... .....+.
T Consensus 156 ~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~------~~~-~~~~~~~---- 221 (260)
T cd08222 156 MGSCD---LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL------SVV-LRIVEGP---- 221 (260)
T ss_pred CCCcc---cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHH-HHHHcCC----
Confidence 43221 122345788999999998888999999999999999999999999633210 000 1111110
Q ss_pred cccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 733 VDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 733 ~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.+ ..+......+.+++.+|++.+|++||++.++++
T Consensus 222 -~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 -TP-----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -CC-----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 01 112223346778899999999999999999975
No 353
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=6.4e-31 Score=286.19 Aligned_cols=247 Identities=25% Similarity=0.320 Sum_probs=191.8
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
.++...+.||+|+||.||+|+.. ++..+++|.+... .....++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34555678999999999999964 5788999988632 223456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+. |+|.+++... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 95 e~~~-~~l~~~~~~~----~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 95 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EccC-CCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 9996 6888777432 2347899999999999999999998 899999999999999999999999999987654
Q ss_pred CCCCcceeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
.. ....++..|+|||.+. ...++.++||||||+++|||++|+.||........ . ........
T Consensus 167 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~-~~~~~~~~- 231 (308)
T cd06634 167 PA-------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------L-YHIAQNES- 231 (308)
T ss_pred Cc-------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH------H-HHHhhcCC-
Confidence 32 2245788999999985 34678899999999999999999999864321110 0 01111100
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 731 GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
+.. ........+.+++.+|++.+|++||++.+|++...
T Consensus 232 ----~~~----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 232 ----PAL----QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ----CCc----CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 000 11122345678889999999999999999987643
No 354
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=2.3e-31 Score=285.09 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=197.9
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~ 573 (852)
.|.+.+.||+|+||.||++... +++.|++|.+... ....+.+..|++++.+++ |+||+++++++.+.+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 3567789999999999999965 6889999998742 233467889999999998 999999999999999999999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
||+++++|.+++... ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 82 EYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999643 259999999999999999999998 899999999999999999999999999998664
Q ss_pred CCCCc-----------------ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhh
Q 003059 654 PKDHR-----------------HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKF 716 (852)
Q Consensus 654 ~~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l 716 (852)
..... ........++..|+|||.+....++.++||||||++++|+++|+.||.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---- 229 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---- 229 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH----
Confidence 32210 011223457889999999998889999999999999999999999997543110
Q ss_pred HHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCH----HHHHH
Q 003059 717 SLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMM----GKVVQ 773 (852)
Q Consensus 717 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~----~ev~~ 773 (852)
........ .. ..+......+.+++.+|++.+|.+||++ +++++
T Consensus 230 ---~~~~~~~~------~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 ---TFQKILKL------EY-----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHhc------CC-----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00111100 00 1111223457788999999999999999 66653
No 355
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.4e-32 Score=282.04 Aligned_cols=195 Identities=30% Similarity=0.389 Sum_probs=174.1
Q ss_pred cccccccccceEEEEEEC-CCcEEEEEEec----CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 504 KDKLGAGGFGAVYRGVLA-NRTVVAVKQLE----GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~----~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
-++||+||||.||-...+ .|+.+|.|++. +...++..-.+|-.+|.+++.+.||.+--.+...+..++|+..|.|
T Consensus 190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNG 269 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNG 269 (591)
T ss_pred eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecC
Confidence 468999999999998854 58899999886 3455667788999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.-+|.... ...++++.++-++.+|+.||++||. .+||+|||||+|||||++|+++|+|+|+|..+...
T Consensus 270 GDLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g--- 340 (591)
T KOG0986|consen 270 GDLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG--- 340 (591)
T ss_pred CceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCCC---
Confidence 99999997554 3568999999999999999999998 89999999999999999999999999999987643
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
......+||.+|||||++.+..|+...|-|||||+||||+.|+.||...
T Consensus 341 -~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 341 -KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred -CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 2334558999999999999999999999999999999999999999743
No 356
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=5.3e-31 Score=287.00 Aligned_cols=267 Identities=24% Similarity=0.299 Sum_probs=191.2
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC--------
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG-------- 566 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~-------- 566 (852)
..|.+.++||+|+||.||+|... +++.+++|++.... .....+.+|++++++++|+||+++++++.+.
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 45677889999999999999964 57889999886322 2234678899999999999999999987543
Q ss_pred ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeec
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDF 646 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 646 (852)
...++|+||+.+ +|...+... ...+++..+..++.|+++||+|||+ .+|+|+||||+||++++++.+||+||
T Consensus 88 ~~~~lv~~~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 88 GSVYMVTPYMDH-DLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred ceEEEEEecCCc-CHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcC
Confidence 346999999964 677766532 3358999999999999999999998 89999999999999999999999999
Q ss_pred ccccccCCCCCc--------ceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhH
Q 003059 647 GLAKLINPKDHR--------HRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFS 717 (852)
Q Consensus 647 Gla~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~ 717 (852)
|+++........ ........+++.|+|||.+.+. .++.++||||||+++|||++|+.||............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999865432211 1112234568889999988654 5789999999999999999999999754332211110
Q ss_pred HHHHHHHhh------CCcccccc-cccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 718 LWAYEEFEK------GNVKGIVD-KSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 718 ~~~~~~~~~------~~~~~~~d-~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
......... ..+....+ ......+...+ ....+.+++.+|++.+|.+||++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000000000 00000000 00000011111 1145778999999999999999999874
No 357
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=4.6e-31 Score=290.95 Aligned_cols=259 Identities=24% Similarity=0.283 Sum_probs=190.8
Q ss_pred ccccccccccceEEEEEEC-CCcEEEEEEecCcccc---------------hHHHHHHHHHhhcccccceeeeeeeeccC
Q 003059 503 FKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQG---------------EKQFRMEVATISSTHHLNLVRLVGFSSEG 566 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---------------~~~f~~E~~~l~~l~h~niv~l~g~~~~~ 566 (852)
+.+.||.|+||.||+|... +++.||||.+...... ...+.+|++++.+++|+||+++++++..+
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3467999999999999964 5889999988633221 12477899999999999999999999999
Q ss_pred ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeec
Q 003059 567 KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDF 646 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 646 (852)
+..++||||+. ++|.+++... ..+++.....++.|++.||+|||+ .+++|+||||+||+++.++.+||+||
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECCc
Confidence 99999999996 6899988532 348899999999999999999998 89999999999999999999999999
Q ss_pred ccccccCCCCC-----------cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccch
Q 003059 647 GLAKLINPKDH-----------RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRK 714 (852)
Q Consensus 647 Gla~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~ 714 (852)
|+++....... .........++..|+|||.+.+. .++.++||||||+++|||++|+.||......+.
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~- 242 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ- 242 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 99986541110 01111223467889999998764 468999999999999999999999975543211
Q ss_pred hhHHHHHHHHhhCCcc---cc-----cccccCCCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 715 KFSLWAYEEFEKGNVK---GI-----VDKSLAGEDVDI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 715 ~l~~~~~~~~~~~~~~---~~-----~d~~l~~~~~~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.............. .. ..+.....+... .....+.+++.+|++.+|++||++.+++.
T Consensus 243 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 243 --LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred --HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11111111100000 00 000000000000 11245678999999999999999999986
No 358
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=9e-31 Score=289.34 Aligned_cols=264 Identities=23% Similarity=0.298 Sum_probs=189.6
Q ss_pred hcccccccccccccceEEEEEEC-CCcEEEEEEecCc-ccchHHHHHHHHHhhcccccceeeeeeeeccC----------
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI-EQGEKQFRMEVATISSTHHLNLVRLVGFSSEG---------- 566 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~---------- 566 (852)
.+|.+.+.||.|+||.||+|... +++.|++|.+... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 46777889999999999999964 5789999998733 34456788999999999999999999876543
Q ss_pred ----ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC-CCCce
Q 003059 567 ----KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD-ENYNA 641 (852)
Q Consensus 567 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~ 641 (852)
...++||||++ ++|.+++.. ..+++..+..++.||++||.|||+ .+|+||||||+||+++ +++.+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceE
Confidence 35789999997 589888742 248899999999999999999998 8999999999999997 45678
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH
Q 003059 642 KVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA 720 (852)
Q Consensus 642 kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 720 (852)
||+|||+++.+..............++..|+|||.+.. ..++.++|||||||++|||++|+.||...............
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99999999865432111111123457889999998754 56788999999999999999999999654321110000000
Q ss_pred --------HHHHhhCCcccccccccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 721 --------YEEFEKGNVKGIVDKSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 721 --------~~~~~~~~~~~~~d~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....... ..............+.. ....+.+++..|++.||++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 235 VPVVREEDRNELLNV-IPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred cCCCChHHhhhhhhh-hhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0000000 00000000000011111 1245678999999999999999999984
No 359
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=1.2e-30 Score=277.95 Aligned_cols=240 Identities=20% Similarity=0.267 Sum_probs=182.5
Q ss_pred cccccc--ccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeec
Q 003059 501 KGFKDK--LGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 501 ~~~~~~--lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
+.+.+. ||+|+||.||++.. .+++.+++|.+....... .|+.....+ +|+||+++++++...+..++||||+
T Consensus 16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~ 91 (267)
T PHA03390 16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYI 91 (267)
T ss_pred hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcC
Confidence 344444 59999999999985 457889999887432221 122222222 7999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC-ceEEeecccccccCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY-NAKVSDFGLAKLINPK 655 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~ 655 (852)
++++|.+++... ..+++..+..++.||++||.|||+ .+++||||||+||+++.++ .++|+|||+++.....
T Consensus 92 ~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 92 KDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 999999999543 268999999999999999999998 8899999999999999998 9999999998765421
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
....++..|+|||++.+..++.++||||||+++|||++|+.||....... .....+.... ..
T Consensus 164 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~----------~~ 225 (267)
T PHA03390 164 -------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKRQ----------QK 225 (267)
T ss_pred -------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHhh----------cc
Confidence 12357899999999999999999999999999999999999997443221 1111111100 01
Q ss_pred ccCCCCCCHHHHHHHHHHHHhccccCCCCCCC-HHHHHH
Q 003059 736 SLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPM-MGKVVQ 773 (852)
Q Consensus 736 ~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-~~ev~~ 773 (852)
.. .........+.+++.+|++.+|.+||+ ++++++
T Consensus 226 ~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 KL---PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cC---CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 011122345677888999999999996 588764
No 360
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=5.8e-32 Score=269.86 Aligned_cols=205 Identities=27% Similarity=0.387 Sum_probs=171.8
Q ss_pred cccccccccccccceEEEEEEC---C--CcEEEEEEecCcccc---hHHHHHHHHHhhcccccceeeeeeeecc-Cceee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA---N--RTVVAVKQLEGIEQG---EKQFRMEVATISSTHHLNLVRLVGFSSE-GKHRL 570 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~---~--~~~vavK~l~~~~~~---~~~f~~E~~~l~~l~h~niv~l~g~~~~-~~~~~ 570 (852)
.|+...+||+|.||.||+|+-. + ...+|+|+++..... .....+|+.+++.++||||+.|..++.+ +...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 4566778999999999999632 2 237999999854322 2456789999999999999999998876 78999
Q ss_pred EEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC----CceEEeec
Q 003059 571 LVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN----YNAKVSDF 646 (852)
Q Consensus 571 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~----~~~kl~DF 646 (852)
|++||.+. +|...|+-+.....+.++-..+..|+-||+.|+.|||+ +-|+||||||.||||..+ |.+||+||
T Consensus 105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999976 88888876666566789999999999999999999999 889999999999999776 99999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
|++|.+...-........++-|+-|.|||.+.+. .|+++.|||+.||++.||+|-++.|...
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9999986543322334456778999999999876 6899999999999999999988888654
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=9.3e-31 Score=280.79 Aligned_cols=260 Identities=25% Similarity=0.309 Sum_probs=195.2
Q ss_pred cccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 502 GFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.+.++||+|+||.||+|+.. +++.+++|.+... ....+.+..|++++++++|+||+++++++.+.+..++||||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 45678999999999999965 4889999998843 3334678899999999999999999999999999999999997
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
++|.+++.... ..+++..+..++.|++.+|+|||+ .+|+||||+|+||++++++.+||+|||+++.......
T Consensus 82 -~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 82 -MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred -cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 59999996432 358999999999999999999999 8999999999999999999999999999987643211
Q ss_pred cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchh-hH-------HHHHHHHhhCC
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKK-FS-------LWAYEEFEKGN 728 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~-l~-------~~~~~~~~~~~ 728 (852)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... .. ...+.......
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 154 ---TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred ---ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence 12233457789999998776 88999999999999999999999996543211100 00 00000000000
Q ss_pred -cccccccccCCCCC---CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 729 -VKGIVDKSLAGEDV---DIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 729 -~~~~~d~~l~~~~~---~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....... ...... .......+.+++..|++.+|++||++.+|+.
T Consensus 231 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 231 DYKPTFPK-FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccc-cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000 000000 0011346788999999999999999999875
No 362
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.6e-31 Score=306.95 Aligned_cols=245 Identities=27% Similarity=0.408 Sum_probs=183.7
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecCc--ccchHHHHHHHHHhhcccccceeeeeeeec-----------------
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI--EQGEKQFRMEVATISSTHHLNLVRLVGFSS----------------- 564 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~f~~E~~~l~~l~h~niv~l~g~~~----------------- 564 (852)
+.||+||||.|||++. -||+.+|||++... ......+.+|++.|++|+|||||+++..+.
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~ 564 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSE 564 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchh
Confidence 4799999999999994 47899999999843 444567889999999999999999862100
Q ss_pred ------------------------------------------------------------------------c-------
Q 003059 565 ------------------------------------------------------------------------E------- 565 (852)
Q Consensus 565 ------------------------------------------------------------------------~------- 565 (852)
+
T Consensus 565 ~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~ 644 (1351)
T KOG1035|consen 565 SRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDD 644 (1351)
T ss_pred hhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCc
Confidence 0
Q ss_pred ---------------C--------ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCC
Q 003059 566 ---------------G--------KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDC 622 (852)
Q Consensus 566 ---------------~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 622 (852)
+ ...||=||||+...|++++..+.... .-...++++++|++||+|+|+ .+
T Consensus 645 ~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~----~~d~~wrLFreIlEGLaYIH~---~g 717 (1351)
T KOG1035|consen 645 TSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS----QRDEAWRLFREILEGLAYIHD---QG 717 (1351)
T ss_pred chhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch----hhHHHHHHHHHHHHHHHHHHh---Cc
Confidence 0 13478899999988888886543211 356678999999999999999 88
Q ss_pred cccCCCCCCceEeCCCCceEEeecccccccC----C-----------CCCcceeeeeecCCCCCCChhhhhcC---CCCC
Q 003059 623 IVHCDIKPENILLDENYNAKVSDFGLAKLIN----P-----------KDHRHRTLTSVRGTRGYLAPEWLANL---PITS 684 (852)
Q Consensus 623 ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~----~-----------~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ 684 (852)
||||||||.||+||++..+||+|||+|.... . ........+...||.-|+|||.+.+. .|+.
T Consensus 718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~ 797 (1351)
T KOG1035|consen 718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS 797 (1351)
T ss_pred eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence 9999999999999999999999999998721 0 01112234567899999999999765 4999
Q ss_pred CccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCC-CCCCHHHHHHHHHHHHhccccCCC
Q 003059 685 KSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAG-EDVDIEQVMRAIQVSFWCIQEQPS 763 (852)
Q Consensus 685 ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~~~l~~~cl~~dp~ 763 (852)
|+|+|||||||+||+. ||...-+. .-....++ +..++. ..+..++...-.+++.|+++.||.
T Consensus 798 KiDmYSLGIVlFEM~y---PF~TsMER------a~iL~~LR--------~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 798 KIDMYSLGIVLFEMLY---PFGTSMER------ASILTNLR--------KGSIPEPADFFDPEHPEEASLIRWLLSHDPS 860 (1351)
T ss_pred hhhhHHHHHHHHHHhc---cCCchHHH------HHHHHhcc--------cCCCCCCcccccccchHHHHHHHHHhcCCCc
Confidence 9999999999999995 45432110 00111122 222221 122344555667899999999999
Q ss_pred CCCCHHHHHH
Q 003059 764 QRPMMGKVVQ 773 (852)
Q Consensus 764 ~RPt~~ev~~ 773 (852)
+|||+.|+++
T Consensus 861 kRPtA~eLL~ 870 (1351)
T KOG1035|consen 861 KRPTATELLN 870 (1351)
T ss_pred cCCCHHHHhh
Confidence 9999999875
No 363
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.9e-30 Score=284.89 Aligned_cols=259 Identities=24% Similarity=0.304 Sum_probs=191.1
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeecc-CceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSE-GKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lV~e 574 (852)
.|.+.+.||+|+||.||++... +++.||+|++... ....+.+..|++++.+++||||+++++++.. ....++|+|
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence 4666789999999999999854 6889999988532 2334678899999999999999999998865 567899999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+ +++|.+++.. ..+++.....++.|+++||+|||+ .+|+||||+|+|||+++++.+||+|||++.....
T Consensus 91 ~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 91 LL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred hh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 98 5689888742 247788888999999999999998 8999999999999999999999999999875432
Q ss_pred CCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhh-HHH-------HHHHHh
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKF-SLW-------AYEEFE 725 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l-~~~-------~~~~~~ 725 (852)
. .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... ... ......
T Consensus 161 ~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd07856 161 Q------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC 234 (328)
T ss_pred C------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 1 122356788999998765 5689999999999999999999999965432111000 000 000000
Q ss_pred hCCcccccccccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 726 KGNVKGIVDKSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.....+.+.........+.. ....+.+++.+|++.+|++||++.+++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 235 SENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred chhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00011111111011111111 12467788999999999999999998764
No 364
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.5e-30 Score=286.49 Aligned_cols=264 Identities=21% Similarity=0.275 Sum_probs=188.7
Q ss_pred ccccccccccccceEEEEEECC---CcEEEEEEecCc---ccchHHHHHHHHHhhcc-cccceeeeeeeecc----Ccee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN---RTVVAVKQLEGI---EQGEKQFRMEVATISST-HHLNLVRLVGFSSE----GKHR 569 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~---~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~----~~~~ 569 (852)
|.+.+.||+|+||.||++.... +..||+|++... ....+.+.+|++++.++ +|+||+++++.+.. ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 5567889999999999999643 678999998732 22346788899999999 59999999987543 2457
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++++||+. ++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 82 ~~~~e~~~-~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 82 YLYEELME-ADLHQIIRS-----GQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEeccc-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 88899885 689988853 3358899999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCc-ceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHH--------H
Q 003059 650 KLINPKDHR-HRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSL--------W 719 (852)
Q Consensus 650 ~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~--------~ 719 (852)
+.+...... ........|+..|+|||.+.+ ..++.++||||||+++|||++|+.||............. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 865432211 111233568999999998865 468999999999999999999999997543211000000 0
Q ss_pred HHHHHhhCCcccccccccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 720 AYEEFEKGNVKGIVDKSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....+............-........ ....+.+++.+|++.+|.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000000000000111 1245778999999999999999999874
No 365
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=2e-30 Score=286.64 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=193.1
Q ss_pred HhcccccccccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc------
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK------ 567 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~------ 567 (852)
..+|.+.+.||+|+||.||++.. .+++.||||++... ......+.+|++++++++|+||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 34567788999999999999985 46889999998632 223456889999999999999999999887543
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
..++||||+ +++|.+++.. ..+++..++.++.||++||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 7799888742 358899999999999999999998 899999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH------
Q 003059 648 LAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA------ 720 (852)
Q Consensus 648 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~------ 720 (852)
++...... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||........ +....
T Consensus 164 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~ 235 (343)
T cd07880 164 LARQTDSE------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ--LMEIMKVTGTP 235 (343)
T ss_pred cccccccC------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCC
Confidence 99865321 123457889999999876 4588999999999999999999999975432110 00000
Q ss_pred ----HHHHhhCCcccccccccCCCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHH--HHhcCc
Q 003059 721 ----YEEFEKGNVKGIVDKSLAGEDVDI-----EQVMRAIQVSFWCIQEQPSQRPMMGKVVQ--MLEGIT 779 (852)
Q Consensus 721 ----~~~~~~~~~~~~~d~~l~~~~~~~-----~~~~~~~~l~~~cl~~dp~~RPt~~ev~~--~L~~~~ 779 (852)
...+.................... .....+.+++.+|++.||.+||++.++++ .++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 236 SKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred CHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 000000000000000000000000 11224678999999999999999999983 444443
No 366
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=2.2e-30 Score=282.62 Aligned_cols=242 Identities=27% Similarity=0.376 Sum_probs=188.1
Q ss_pred cccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 502 GFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
...++||+|+||.||+|+.. +++.|++|.+.... .....+.+|++++++++|+|++++++++.+....++||||+
T Consensus 24 ~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 103 (313)
T cd06633 24 VGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYC 103 (313)
T ss_pred hcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecC
Confidence 33567999999999999864 57889999986322 22356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
. ++|.+++... ...+++..+..++.||+.+|.|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 104 ~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 104 L-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred C-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 5 5787777532 2358999999999999999999998 8999999999999999999999999999864322
Q ss_pred CcceeeeeecCCCCCCChhhhh---cCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLA---NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.....|+..|+|||.+. ...++.++||||||+++|||++|..||........ ... ......
T Consensus 174 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~------~~~-~~~~~~---- 237 (313)
T cd06633 174 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYH-IAQNDS---- 237 (313)
T ss_pred -----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH------HHH-HHhcCC----
Confidence 12345788999999984 45688899999999999999999999865432110 000 011111
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
+... .......+.+++.+|++.+|.+||++.++++.
T Consensus 238 -~~~~----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 -PTLQ----SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -CCCC----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 01112346678889999999999999999853
No 367
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=275.03 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=205.3
Q ss_pred HHHhcccccccccccccceEEEEEEC------CCcEEEEEEecC--cccchHHHHHHHHHhhcccccceeeeeeeecc-C
Q 003059 496 LQRSTKGFKDKLGAGGFGAVYRGVLA------NRTVVAVKQLEG--IEQGEKQFRMEVATISSTHHLNLVRLVGFSSE-G 566 (852)
Q Consensus 496 l~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~--~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~-~ 566 (852)
+.+.+.++...+-+|.||.||+|.++ +.+.|.||.++. .......+..|...+..+.|||+..+.+++.+ .
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 34555666778999999999999754 345688888773 33345678899999999999999999998765 5
Q ss_pred ceeeEEEeecCCCCHHHHhhhc---ccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEE
Q 003059 567 KHRLLVYEFMKNGSLDNFLFAN---EEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKV 643 (852)
Q Consensus 567 ~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 643 (852)
...+.+|.++.-|+|..||... .....+.++..+...++.|++.|++|||. +++||.||.++|++||+..++||
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeEEe
Confidence 5789999999999999999732 12234567778888999999999999998 89999999999999999999999
Q ss_pred eecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHH
Q 003059 644 SDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYE 722 (852)
Q Consensus 644 ~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~ 722 (852)
+|-.++|.+.+.++. ....+...+..||+||.+.+..|+..+|||||||+||||+| |+.|+...++.+ +..
T Consensus 438 tDsaLSRDLFP~DYh-cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------m~~ 509 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYH-CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------MEH 509 (563)
T ss_pred ccchhccccCccccc-ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-------HHH
Confidence 999999988776543 22333445778999999999999999999999999999998 899986443321 111
Q ss_pred HHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 723 EFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
.+.++ .++.+ +.....++..++.-||..+|++||+++|++..|.+.
T Consensus 510 ylkdG-------yRlaQ---P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 510 YLKDG-------YRLAQ---PFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred HHhcc-------ceecC---CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 12222 12222 223344566777889999999999999999998753
No 368
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=264.89 Aligned_cols=259 Identities=23% Similarity=0.341 Sum_probs=197.0
Q ss_pred HHHHHHhcccccccccccccceEEEEE-ECCCcEEEEEEecCc-ccchHHHHHHHHHhhccc-ccceeeeeeeeccCcee
Q 003059 493 YKELQRSTKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGI-EQGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 493 ~~el~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~-~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~ 569 (852)
+.|+.+-| .+.||+|+++.|--++ +.++.++|||++.+. .....+..+|++++...+ |+||++|++||.++...
T Consensus 75 F~d~YkLt---~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 75 FEDMYKLT---SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHHHhH---HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence 45555555 3679999999999887 678999999999854 344577889999999885 99999999999999999
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc---eEEeec
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN---AKVSDF 646 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DF 646 (852)
|||||-|.||+|..+|.++ +.+++.++.++.++|+.||.+||. ++|.||||||+|||-.+... +||+||
T Consensus 152 YLVfEKm~GGplLshI~~~-----~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKR-----KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred EEEEecccCchHHHHHHHh-----hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeecc
Confidence 9999999999999999754 348899999999999999999999 99999999999999865443 799999
Q ss_pred ccccccCCCCCc----ceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhCCccccccccccch---
Q 003059 647 GLAKLINPKDHR----HRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRK--- 714 (852)
Q Consensus 647 Gla~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~--- 714 (852)
.+..-.....+. ........|...|||||+.. ...|+.+.|.||||||||-||+|.+||.+...++-.
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 988654322221 12233467889999999873 346889999999999999999999999766443211
Q ss_pred -----hhHHHHHHHHhhCCcccccccccCCCCCCHHHH----HHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 715 -----KFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQV----MRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 715 -----~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~----~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
.......+.+.++.. .++.+++ ...-+++...+..++.+|-++.++++
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkY-----------eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKY-----------EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCccHHHHHHHHHHHhccCC-----------cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111112222222221 2233222 22345556677789999999988886
No 369
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2e-30 Score=273.03 Aligned_cols=235 Identities=28% Similarity=0.337 Sum_probs=189.9
Q ss_pred ccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 507 LGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
||+|+||.||++... +++.+++|.+.... .....+..|++++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 799999999999975 47889999987432 2345789999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCccee
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRT 661 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 661 (852)
.+++... ..+++..+..++.|+++||.|||+ .+++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---~~ 149 (250)
T cd05123 81 FSHLSKE-----GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---SR 149 (250)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC---Cc
Confidence 9999643 248899999999999999999998 899999999999999999999999999998764321 12
Q ss_pred eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 662 LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
.....++..|+|||.+.+...+.++|+||||+++|||++|+.||...... .. ...... ..+ .
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~----~~~~~~--------~~~---~ 211 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK---EI----YEKILK--------DPL---R 211 (250)
T ss_pred ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HH----HHHHhc--------CCC---C
Confidence 23455788999999999888999999999999999999999999644321 10 111111 000 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGK 770 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~e 770 (852)
.+......+.+++.+|+..||++||++.+
T Consensus 212 ~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 212 FPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 11111345678889999999999999954
No 370
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.1e-30 Score=288.80 Aligned_cols=260 Identities=22% Similarity=0.315 Sum_probs=188.8
Q ss_pred hcccccccccccccceEEEEEE-CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC------ce
Q 003059 499 STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG------KH 568 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~------~~ 568 (852)
.+|.+.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|+.++.+++|+||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 3455678899999999999985 468899999987432 2345678899999999999999999987543 34
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 97 ~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~dfg~ 166 (345)
T cd07877 97 VYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 166 (345)
T ss_pred EEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEEEecccc
Confidence 67888887 7899888742 348899999999999999999998 8999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhh-HH-------H
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKF-SL-------W 719 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l-~~-------~ 719 (852)
++.... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... .. .
T Consensus 167 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
T cd07877 167 ARHTDD------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 240 (345)
T ss_pred cccccc------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 876432 1123457889999999876 5688999999999999999999999964432111000 00 0
Q ss_pred HHHHHhhCCcccccc--cccCCCCCC---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 720 AYEEFEKGNVKGIVD--KSLAGEDVD---IEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d--~~l~~~~~~---~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
....+........+. +........ ......+.+++.+|++.||.+||++.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 241 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000000000 000000000 0112356788999999999999999998854
No 371
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3e-30 Score=307.38 Aligned_cols=143 Identities=25% Similarity=0.389 Sum_probs=127.6
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEe
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 574 (852)
.|.+.++||+|+||.||+|... .++.||||++.... ....++..|+.++..++|+||+++++++......+||||
T Consensus 5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmE 84 (669)
T cd05610 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVME 84 (669)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEe
Confidence 4667889999999999999975 58899999987432 223678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
|+++++|.+++... ..+++..++.++.||+.||+|||. .+|+||||||+||||+.++.+||+|||+++
T Consensus 85 y~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 85 YLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999543 247888899999999999999998 799999999999999999999999999986
No 372
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=2.6e-30 Score=285.77 Aligned_cols=258 Identities=22% Similarity=0.325 Sum_probs=191.3
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCce------e
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKH------R 569 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~------~ 569 (852)
.|.+.+.||+|+||.||+|... +++.||+|++... ......+.+|+.++++++|+||+++++++...+. .
T Consensus 16 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07851 16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDV 95 (343)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccE
Confidence 4666789999999999999975 5788999998632 2234567789999999999999999998776554 8
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 96 ~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 96 YLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred EEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEcccccc
Confidence 9999998 6799998852 358999999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhH-HH-------H
Q 003059 650 KLINPKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFS-LW-------A 720 (852)
Q Consensus 650 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~-~~-------~ 720 (852)
...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||............ .. .
T Consensus 166 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 166 RHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL 239 (343)
T ss_pred cccccc------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence 865321 223457888999999865 36789999999999999999999999654321110000 00 0
Q ss_pred HHHHhhCCcccccccccCCCCCCHH-----HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 721 YEEFEKGNVKGIVDKSLAGEDVDIE-----QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~-----~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...+........+............ ....+.+++.+|++.+|++||++.+|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000000000000000000111 1346788999999999999999999875
No 373
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=268.52 Aligned_cols=268 Identities=24% Similarity=0.336 Sum_probs=201.8
Q ss_pred CCcccCHHHHHHhcccccccccccccceEEEEE-ECCCcEEEEEEecCccc--------chHHHHHHHHHhhccccccee
Q 003059 487 APVQFSYKELQRSTKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQ--------GEKQFRMEVATISSTHHLNLV 557 (852)
Q Consensus 487 ~~~~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~--------~~~~f~~E~~~l~~l~h~niv 557 (852)
...+|.-.-+...+|-+.+.||+|||+.|||+. +...+.||||+-...+. -.+...+|..|-+.|.||.||
T Consensus 451 dnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIV 530 (775)
T KOG1151|consen 451 DNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIV 530 (775)
T ss_pred chhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceee
Confidence 344566566666777778899999999999998 45678999998752211 123456799999999999999
Q ss_pred eeeeeec-cCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC
Q 003059 558 RLVGFSS-EGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD 636 (852)
Q Consensus 558 ~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~ 636 (852)
++++++. +.+..|-|.|||+|.+|+-||..+ +.+++.++..|+.||+.||.||.+. +.+|||-||||.||||-
T Consensus 531 KlYDyfslDtdsFCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv 604 (775)
T KOG1151|consen 531 KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLV 604 (775)
T ss_pred eeeeeeeeccccceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEe
Confidence 9999986 456789999999999999999654 4589999999999999999999975 47899999999999995
Q ss_pred ---CCCceEEeecccccccCCCCCcce----eeeeecCCCCCCChhhhhcC----CCCCCccchhhhHHHHHHHhCCccc
Q 003059 637 ---ENYNAKVSDFGLAKLINPKDHRHR----TLTSVRGTRGYLAPEWLANL----PITSKSDVYSYGMVLLEIVSGRRNF 705 (852)
Q Consensus 637 ---~~~~~kl~DFGla~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~----~~s~ksDv~s~Gvvl~elltG~~p~ 705 (852)
.-|.+||.|||+++.+..+.+... ......||.-|++||.+--+ +++.|.||||.||++|..+-|+.||
T Consensus 605 ~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPF 684 (775)
T KOG1151|consen 605 NGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPF 684 (775)
T ss_pred cCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCC
Confidence 458899999999999876544321 22346799999999988533 5788999999999999999999999
Q ss_pred cccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 003059 706 EVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVV 772 (852)
Q Consensus 706 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~ 772 (852)
....... ..+.++.+.....-.+ +..+....+.-.++.+|++..-++|....++.
T Consensus 685 GhnqsQQ---------dILqeNTIlkAtEVqF---P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 685 GHNQSQQ---------DILQENTILKATEVQF---PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred CCchhHH---------HHHhhhchhcceeccC---CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 7543211 1122222222222111 11222223456788999999999997766553
No 374
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=271.64 Aligned_cols=272 Identities=21% Similarity=0.292 Sum_probs=208.6
Q ss_pred cccCHHHHHHhcccccccccccccceEEEEEECC-CcEEEEEEecCcccchHHHHHHHHHhhccc-cc-----ceeeeee
Q 003059 489 VQFSYKELQRSTKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQFRMEVATISSTH-HL-----NLVRLVG 561 (852)
Q Consensus 489 ~~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~f~~E~~~l~~l~-h~-----niv~l~g 561 (852)
..|...+....+|.+...+|+|.||.|-+...+. +..||||+++....-.+.-+-|+++|.++. +. -+|.+.+
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~ 158 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRD 158 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence 3466778888899999999999999999998644 689999999977776777788999999994 22 3888889
Q ss_pred eeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC-----
Q 003059 562 FSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD----- 636 (852)
Q Consensus 562 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~----- 636 (852)
++...++.+||+|.+ |-|+.++|..+. -.+++...+..|+.|++++++|||+ .+++|-||||+|||+-
T Consensus 159 wFdyrghiCivfell-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 159 WFDYRGHICIVFELL-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred hhhccCceEEEEecc-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceE
Confidence 999999999999998 779999996543 4568889999999999999999999 8999999999999983
Q ss_pred ---------------CCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhC
Q 003059 637 ---------------ENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSG 701 (852)
Q Consensus 637 ---------------~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG 701 (852)
.+..+||+|||.|..-.. .....+.|..|.|||++.+..++.++||||+||||+||.+|
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG 305 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTG 305 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceecc------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeecc
Confidence 234589999999986533 12556789999999999999999999999999999999999
Q ss_pred CccccccccccchhhHHHH--------H------HHHhhCCc-----------cccccccc---CCCCCCHHHHHHHHHH
Q 003059 702 RRNFEVSQETNRKKFSLWA--------Y------EEFEKGNV-----------KGIVDKSL---AGEDVDIEQVMRAIQV 753 (852)
Q Consensus 702 ~~p~~~~~~~~~~~l~~~~--------~------~~~~~~~~-----------~~~~d~~l---~~~~~~~~~~~~~~~l 753 (852)
...|...+..+....-... . ..+..+.+ ....+... .......++..++.++
T Consensus 306 ~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDL 385 (415)
T KOG0671|consen 306 ETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDL 385 (415)
T ss_pred ceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHH
Confidence 9999765522211100000 0 00001100 00000000 0001223455678999
Q ss_pred HHhccccCCCCCCCHHHHHH
Q 003059 754 SFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 754 ~~~cl~~dp~~RPt~~ev~~ 773 (852)
+..++..||.+|+|+.|++.
T Consensus 386 l~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 386 LRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHccCccccccHHHHhc
Confidence 99999999999999999875
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=9.8e-30 Score=265.87 Aligned_cols=221 Identities=20% Similarity=0.169 Sum_probs=175.1
Q ss_pred cccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHHHHhhhc
Q 003059 510 GGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFAN 588 (852)
Q Consensus 510 G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~ 588 (852)
|.||.||++.. .+++.+|+|++.... .+..|...+....||||+++++++.+....++||||+++++|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 88999999996 457889999987432 3345555566667999999999999999999999999999999998643
Q ss_pred ccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCC
Q 003059 589 EEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGT 668 (852)
Q Consensus 589 ~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt 668 (852)
..+++..+..++.|+++||+|||+ ++|+||||||+||+++.++.++|+|||.+..+... .....++
T Consensus 80 -----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------~~~~~~~ 145 (237)
T cd05576 80 -----LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------CDGEAVE 145 (237)
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccc------cccCCcC
Confidence 248899999999999999999998 89999999999999999999999999988755331 1223456
Q ss_pred CCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHH
Q 003059 669 RGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVM 748 (852)
Q Consensus 669 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 748 (852)
..|+|||.+.+..++.++||||+|+++|||++|+.|+....... . ..... ..+.....
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~-----~~~~~-----~~~~~~~~ 203 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------N-----THTTL-----NIPEWVSE 203 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------c-----ccccc-----CCcccCCH
Confidence 78999999988889999999999999999999998875321100 0 00000 01111224
Q ss_pred HHHHHHHhccccCCCCCCCHHH
Q 003059 749 RAIQVSFWCIQEQPSQRPMMGK 770 (852)
Q Consensus 749 ~~~~l~~~cl~~dp~~RPt~~e 770 (852)
.+.+++.+|++.||.+||++.+
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCCc
Confidence 5677889999999999999743
No 376
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=273.31 Aligned_cols=194 Identities=34% Similarity=0.495 Sum_probs=169.1
Q ss_pred cccccccccceEEEEEE-CCCcEEEEEEecC---cccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 504 KDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG---IEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~---~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
.|.||.|.||+||-|+. ++|+.||||++.+ ....+.++++|+.||.+++||.||.+--.|+..+..++|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 46899999999999995 5699999999874 3455688999999999999999999999999999999999999 66
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC---CceEEeecccccccCCCC
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN---YNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~DFGla~~~~~~~ 656 (852)
++.+.|...+ ...|+...-.-++.||+.||.|||. ++|+|+||||+||||... -++||+|||+|+.+.+..
T Consensus 648 DMLEMILSsE---kgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 648 DMLEMILSSE---KGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hHHHHHHHhh---cccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 7766665443 3358888878889999999999998 899999999999999643 569999999999987643
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
-...++||+.|+|||+++.+.|...-|+||.||++|--|+|..||...
T Consensus 722 ----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 722 ----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred ----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 235678999999999999999999999999999999999999999643
No 377
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=260.40 Aligned_cols=198 Identities=27% Similarity=0.305 Sum_probs=171.4
Q ss_pred ccccccccccccceEEEEEE-CCCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
..|.+.||+|.||.|.+++- ..++.+|+|++++.. .....-..|-.+|+..+||.+..|--.|...++.|.||||
T Consensus 170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey 249 (516)
T KOG0690|consen 170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY 249 (516)
T ss_pred hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence 44678999999999999984 568999999998432 2223346788999999999999998889999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
..||.|.-+|.. .+.+++....-+...|..||.|||+ ++||.||||.+|.|||.+|++||+|||+++.--
T Consensus 250 anGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 250 ANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred ccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 999999988854 3457777777889999999999999 899999999999999999999999999998532
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQ 709 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~ 709 (852)
.....+....||+.|+|||++....|....|-|.+|||+|||++|+.||...+
T Consensus 320 -~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d 372 (516)
T KOG0690|consen 320 -KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD 372 (516)
T ss_pred -cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence 22345677899999999999999999999999999999999999999997554
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4e-30 Score=281.82 Aligned_cols=238 Identities=24% Similarity=0.289 Sum_probs=189.8
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.|.+...+|.|+|+.|-++.. ..++..+||++... ..+-.+|+.++.+. +||||+++.+.+.++.+.|+|||.+.
T Consensus 323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~ 399 (612)
T KOG0603|consen 323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD 399 (612)
T ss_pred hhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhcc
Confidence 466677899999999999885 45788999999854 23345677666555 79999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe-CCCCceEEeecccccccCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL-DENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl-~~~~~~kl~DFGla~~~~~~~ 656 (852)
++-|.+.+..... .. ..+..|+.+|+.++.|||+ +++|||||||+|||+ ++.++++|+|||.++...+.
T Consensus 400 g~ell~ri~~~~~-----~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 400 GGELLRRIRSKPE-----FC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred ccHHHHHHHhcch-----hH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9988887764332 22 6777899999999999999 899999999999999 69999999999999987653
Q ss_pred CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 657 HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
....+-|..|.|||++....+++++|+||||++||+||+|+.||...... ......+..+
T Consensus 470 -----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~--------- 529 (612)
T KOG0603|consen 470 -----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMP--------- 529 (612)
T ss_pred -----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCC---------
Confidence 23345678999999999999999999999999999999999999765432 0011111111
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.+.......+.+++.+||+.||.+||+|.++...
T Consensus 530 ----~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 530 ----KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ----ccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1222233456677888999999999999998754
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-29 Score=282.74 Aligned_cols=251 Identities=24% Similarity=0.355 Sum_probs=205.7
Q ss_pred hcccccccccccccceEEEEE-ECCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeec-----cCceeeE
Q 003059 499 STKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSS-----EGKHRLL 571 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~-----~~~~~~l 571 (852)
.++.|.+.||.|.+|.||+++ .++++.+|+|++.......++++.|.++++.. .|||++.++|++. .++++||
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 356778999999999999998 56789999999998888889999999999888 6999999999875 3569999
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
|||||.+||.-|++.... +..+.|..+.-|++.++.||.+||. ..++|||||-.|||+..++.+||.|||++..
T Consensus 99 VMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred EeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 999999999999997654 6679999999999999999999998 8899999999999999999999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhhcC-----CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhh
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLANL-----PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEK 726 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (852)
+... ........||+.|||||++... .|+.++|+||||++..||.-|.+|+....+... .-.
T Consensus 173 ldsT---~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra-------LF~--- 239 (953)
T KOG0587|consen 173 LDST---VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA-------LFL--- 239 (953)
T ss_pred eecc---cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-------hcc---
Confidence 6432 1223456799999999999654 477899999999999999999999875433110 000
Q ss_pred CCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 727 GNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.....+.+ ..+.....++.+++..|+..|.++||++.++++
T Consensus 240 --IpRNPPPkL---krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 240 --IPRNPPPKL---KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred --CCCCCCccc---cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 000111111 123456678899999999999999999988764
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=6.6e-29 Score=259.19 Aligned_cols=237 Identities=27% Similarity=0.399 Sum_probs=190.1
Q ss_pred ccceEEEEEECC-CcEEEEEEecCccc-c-hHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHHHHhhh
Q 003059 511 GFGAVYRGVLAN-RTVVAVKQLEGIEQ-G-EKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFA 587 (852)
Q Consensus 511 ~fg~Vy~~~~~~-~~~vavK~l~~~~~-~-~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 587 (852)
+||.||+|+..+ ++.+++|++..... . .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999764 88999999974332 2 57899999999999999999999999999999999999999999999864
Q ss_pred cccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecC
Q 003059 588 NEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRG 667 (852)
Q Consensus 588 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~g 667 (852)
.. .+++..++.++.+++++|.|||+ .+++|+||+|+||++++++.++|+|||.+....... ......+
T Consensus 81 ~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~ 148 (244)
T smart00220 81 RG-----RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----LLTTFVG 148 (244)
T ss_pred cc-----CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc----ccccccC
Confidence 32 28899999999999999999999 799999999999999999999999999998765422 2234557
Q ss_pred CCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHH
Q 003059 668 TRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQV 747 (852)
Q Consensus 668 t~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 747 (852)
+..|++||.+....++.++|||+||++++||++|..||...... .. ............ . .......
T Consensus 149 ~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~----~~~~~~~~~~~~----~----~~~~~~~ 214 (244)
T smart00220 149 TPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LE----LFKKIGKPKPPF----P----PPEWKIS 214 (244)
T ss_pred CcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HH----HHHHHhccCCCC----c----cccccCC
Confidence 88999999999888999999999999999999999999653111 11 011111110000 0 0000023
Q ss_pred HHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 748 MRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 748 ~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
..+.+++.+|+..+|++||++.++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhh
Confidence 46778999999999999999999986
No 381
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-29 Score=230.31 Aligned_cols=207 Identities=25% Similarity=0.386 Sum_probs=169.7
Q ss_pred ccccccccccceEEEEEE-CCCcEEEEEEecCccc--c-hHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 503 FKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQ--G-EKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~-~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
-.|+||+|.||+||||+. +.++.||+|+++-.+. + -....+|+-+++.++|.|||++++....++..-+|+||| .
T Consensus 6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c-d 84 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-D 84 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-h
Confidence 357899999999999995 4578899999873322 2 255789999999999999999999999999999999999 5
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
.+|..|...- ...++.+....++.|+++||.++|+ +++.|||+||+|.||+.+|+.||+|||+++.+.-.
T Consensus 85 qdlkkyfdsl----ng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgip--- 154 (292)
T KOG0662|consen 85 QDLKKYFDSL----NGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--- 154 (292)
T ss_pred HHHHHHHHhc----CCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCc---
Confidence 5788877432 3458888999999999999999999 89999999999999999999999999999977531
Q ss_pred ceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHH
Q 003059 659 HRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWA 720 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~ 720 (852)
.+.....+-|.-|.+|+++.+. -|+...|+||-||++.|+.. |++.|.+.+-.++...+.|.
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~ 218 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHH
Confidence 2333445678899999999876 47889999999999999986 77777766544444333333
No 382
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.4e-28 Score=278.42 Aligned_cols=204 Identities=22% Similarity=0.263 Sum_probs=152.5
Q ss_pred HhcccccccccccccceEEEEEE-----------------CCCcEEEEEEecCccc-chH--------------HHHHHH
Q 003059 498 RSTKGFKDKLGAGGFGAVYRGVL-----------------ANRTVVAVKQLEGIEQ-GEK--------------QFRMEV 545 (852)
Q Consensus 498 ~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~l~~~~~-~~~--------------~f~~E~ 545 (852)
...+.+.++||+|+||.||+|.+ .+++.||||++....+ ..+ .+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 34566778999999999999964 2356799999874322 122 234477
Q ss_pred HHhhcccccce-----eeeeeeecc--------CceeeEEEeecCCCCHHHHhhhcccC-------------------Cc
Q 003059 546 ATISSTHHLNL-----VRLVGFSSE--------GKHRLLVYEFMKNGSLDNFLFANEEG-------------------SG 593 (852)
Q Consensus 546 ~~l~~l~h~ni-----v~l~g~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~~-------------------~~ 593 (852)
.++.+++|.++ ++++++|.. .+..+|||||+++++|.++|+..... ..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777776654 677887753 35789999999999999999743210 11
Q ss_pred cccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCC
Q 003059 594 KLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLA 673 (852)
Q Consensus 594 ~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~a 673 (852)
..++|..+..++.|++++|.|||+ .+|+||||||+|||++.++.+||+|||+++.+..... .......+++.|+|
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~--~~~~~g~~tp~Y~a 378 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN--FNPLYGMLDPRYSP 378 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc--cCccccCCCcceeC
Confidence 245778899999999999999998 8899999999999999999999999999976543211 11112335789999
Q ss_pred hhhhhcCCC----------------------CCCccchhhhHHHHHHHhCCc-ccc
Q 003059 674 PEWLANLPI----------------------TSKSDVYSYGMVLLEIVSGRR-NFE 706 (852)
Q Consensus 674 PE~~~~~~~----------------------s~ksDv~s~Gvvl~elltG~~-p~~ 706 (852)
||.+..... ..+.||||+||+++||++|.. |+.
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 998754321 134799999999999999885 664
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.4e-30 Score=262.08 Aligned_cols=205 Identities=24% Similarity=0.341 Sum_probs=173.1
Q ss_pred HHHHhcccccccccccccceEEEEEECC-CcEEEEEEecCcc----cchHHHHHHHHHhhcc-cccceeeeeeeeccCce
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIE----QGEKQFRMEVATISST-HHLNLVRLVGFSSEGKH 568 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~ 568 (852)
.|..+..+|...||+|.||.|-++.-++ .+.+|||++++.. ...+--..|-.+|+.. +-|.++.++.++..-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 4556677899999999999999998654 5679999998432 2223335677777776 57789999999999999
Q ss_pred eeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccc
Q 003059 569 RLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGL 648 (852)
Q Consensus 569 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 648 (852)
.|.||||+.||+|--++.+-.+ +.+..+.-+|.+||-||-+||+ ++||.||||..|||||.+|++||+|||+
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGm 496 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGM 496 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccc
Confidence 9999999999999888865433 5566677789999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccccc
Q 003059 649 AKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQE 710 (852)
Q Consensus 649 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~ 710 (852)
++.-- ....+.....||+.|+|||++...+|+...|.|||||+||||+.|++||++.++
T Consensus 497 cKEni---~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 497 CKENI---FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred ccccc---cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 98532 222445678899999999999999999999999999999999999999987654
No 384
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-29 Score=280.99 Aligned_cols=244 Identities=27% Similarity=0.365 Sum_probs=186.5
Q ss_pred ccccccccce-EEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecCCCCHH
Q 003059 505 DKLGAGGFGA-VYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMKNGSLD 582 (852)
Q Consensus 505 ~~lG~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 582 (852)
+.+|.|.-|+ ||+|... ++.||||++-. ...+...+|+..|+.- +|||||++++.-.+....||..|.| ..+|+
T Consensus 515 eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~--e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL~ 590 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE-GREVAVKRLLE--EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSLQ 590 (903)
T ss_pred HHcccCCCCcEEEEEeeC-CceehHHHHhh--HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhHH
Confidence 5799999887 6999984 56899999862 2233457899999877 6999999999999999999999999 56999
Q ss_pred HHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-----CCceEEeecccccccCCCCC
Q 003059 583 NFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-----NYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 583 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-----~~~~kl~DFGla~~~~~~~~ 657 (852)
+++..... ......--..+.+..|+++||++||+ .+||||||||+||||+. ..+++|+|||+++.+..+..
T Consensus 591 dlie~~~~-d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s 666 (903)
T KOG1027|consen 591 DLIESSGL-DVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS 666 (903)
T ss_pred HHHhcccc-chhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence 99976411 11111113446788999999999999 89999999999999975 35799999999999877655
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhC-CccccccccccchhhHHHHHHHHhhCCcccccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSG-RRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKS 736 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (852)
.........||-+|+|||.+....-+..+||||||||+|+.++| ..||...-..+. .+..+.. . +..
T Consensus 667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~---------NIl~~~~-~-L~~- 734 (903)
T KOG1027|consen 667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA---------NILTGNY-T-LVH- 734 (903)
T ss_pred hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh---------hhhcCcc-c-eee-
Confidence 55556677899999999999999888999999999999999996 899974422110 0000000 0 000
Q ss_pred cCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 737 LAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 737 l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+ ....+. .+.+++.++++.+|..||++.+|+.
T Consensus 735 L---~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 L---EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred e---ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 0 011111 6778899999999999999999974
No 385
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.8e-28 Score=284.95 Aligned_cols=258 Identities=19% Similarity=0.198 Sum_probs=166.0
Q ss_pred hcccccccccccccceEEEEEECC-----CcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeee------eccCc
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLAN-----RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGF------SSEGK 567 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~------~~~~~ 567 (852)
..|.+.++||+|+||.||+|++.+ +..||||++......+ .+..| .+....+.++..++.. +.++.
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e-~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE-IWMNE--RVRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH-HHHHH--HHHhhchhhHHHHHHhhhcccccccCC
Confidence 456677899999999999999754 5889999886322211 11111 1122222233222221 24567
Q ss_pred eeeEEEeecCCCCHHHHhhhcccC---------------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEG---------------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPEN 632 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 632 (852)
..+|||||+++++|.+++...... .........+..++.||+.||+|||+ ++|+||||||+|
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~N 285 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQN 285 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHH
Confidence 899999999999999998643210 00112234456799999999999998 899999999999
Q ss_pred eEeCC-CCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcC----------------------CCCCCccch
Q 003059 633 ILLDE-NYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANL----------------------PITSKSDVY 689 (852)
Q Consensus 633 ILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~ksDv~ 689 (852)
||+++ ++.+||+|||+++.+.... ........+++.|+|||.+... .++.++|||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~--~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGI--NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccc--ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 99986 6899999999998664321 1223446789999999966422 234567999
Q ss_pred hhhHHHHHHHhCCcccccccccc-------chhhHHHHHHHHhhCCcccccccccCCC---CCC--HHHHHHHHHHHHhc
Q 003059 690 SYGMVLLEIVSGRRNFEVSQETN-------RKKFSLWAYEEFEKGNVKGIVDKSLAGE---DVD--IEQVMRAIQVSFWC 757 (852)
Q Consensus 690 s~Gvvl~elltG~~p~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~d~~l~~~---~~~--~~~~~~~~~l~~~c 757 (852)
||||+||||+++..+++.....- ...+..|. ..+.+..... .+. ........+++.+|
T Consensus 364 SlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWR----------KLVEPRASPDLRRGFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred HHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHH----------HhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence 99999999999877654221000 00011111 0011100000 000 00112344788999
Q ss_pred cccCCCCCCCHHHHHHH
Q 003059 758 IQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 758 l~~dp~~RPt~~ev~~~ 774 (852)
++.||++|||+.++++.
T Consensus 434 L~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 434 MRFKGRQRISAKAALAH 450 (566)
T ss_pred ccCCcccCCCHHHHhCC
Confidence 99999999999999863
No 386
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-29 Score=290.08 Aligned_cols=201 Identities=24% Similarity=0.286 Sum_probs=174.6
Q ss_pred HHhcccccccccccccceEEEEEEC-CCcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeE
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLL 571 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 571 (852)
.+..+.+.+.||+|+||.|..++++ .++.+|+|++.+. ......|..|-.+|.--..+-|+.++-.|.+..+.|+
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence 3455667789999999999999975 4789999999853 2334678889999998899999999999999999999
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
|||||+||+|-.+|.+.. .++...+.-++..|.-||.-||+ .|+|||||||+|||||..|++||+|||.+-.
T Consensus 153 VMdY~pGGDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred EEecccCchHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHh
Confidence 999999999999995442 48888888899999999999999 8999999999999999999999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCChhhhh----c-CCCCCCccchhhhHHHHHHHhCCccccc
Q 003059 652 INPKDHRHRTLTSVRGTRGYLAPEWLA----N-LPITSKSDVYSYGMVLLEIVSGRRNFEV 707 (852)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~ksDv~s~Gvvl~elltG~~p~~~ 707 (852)
+..+ ........+|||.|++||+++ + +.|++.+|-||+||++|||+.|..||..
T Consensus 225 m~~d--G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 225 MDAD--GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred cCCC--CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 7653 333445678999999999995 3 5789999999999999999999999963
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=237.04 Aligned_cols=197 Identities=26% Similarity=0.390 Sum_probs=162.9
Q ss_pred cccccccccceEEEEEE-CCCcEEEEEEecC--cccchHHHHHHHHHhhc-ccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 504 KDKLGAGGFGAVYRGVL-ANRTVVAVKQLEG--IEQGEKQFRMEVATISS-THHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~--~~~~~~~f~~E~~~l~~-l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
.+.||+|++|.|-+-++ .+|+..|+|++.. ..+..++..+|+.+..+ ..+|.+|.++|.....+..++.||.| .-
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DT 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hh
Confidence 45799999999988774 5789999999983 34455677888888655 47999999999999999999999999 55
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcc
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRH 659 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 659 (852)
||+.|-.+-. ..+..+++.-.=+|+..+.+||.|||++ ..+||||+||+||||+.+|++|++|||++-.+...
T Consensus 130 Sldkfy~~v~-~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS---- 202 (282)
T KOG0984|consen 130 SLDKFYRKVL-KKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS---- 202 (282)
T ss_pred hHHHHHHHHH-hcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhh----
Confidence 8887764322 2355688888889999999999999994 68999999999999999999999999999876431
Q ss_pred eeeeeecCCCCCCChhhhhc----CCCCCCccchhhhHHHHHHHhCCcccccc
Q 003059 660 RTLTSVRGTRGYLAPEWLAN----LPITSKSDVYSYGMVLLEIVSGRRNFEVS 708 (852)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~----~~~s~ksDv~s~Gvvl~elltG~~p~~~~ 708 (852)
...+...|...|||||.+.. ..|+-|+||||||+++.||.+++.||+..
T Consensus 203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 11122458889999998853 36889999999999999999999999754
No 388
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-28 Score=258.57 Aligned_cols=155 Identities=25% Similarity=0.359 Sum_probs=133.8
Q ss_pred hhHhhhhhhccCCCcccCHHHHHH-hcccccccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhccc
Q 003059 475 SAQYALLEYASGAPVQFSYKELQR-STKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISSTH 552 (852)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~el~~-~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~ 552 (852)
..++...++..++.+.+...|... ++|-+.++||.|.|++||++.+ .+.+.||+|+.+....-.+.-..||++|++++
T Consensus 53 ~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~ 132 (590)
T KOG1290|consen 53 EEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVR 132 (590)
T ss_pred ccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHH
Confidence 345566678889999999999998 9999999999999999999985 56789999999977666677889999999884
Q ss_pred -----cc---ceeeeeeeecc----CceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccC
Q 003059 553 -----HL---NLVRLVGFSSE----GKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECR 620 (852)
Q Consensus 553 -----h~---niv~l~g~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 620 (852)
|+ .||+|+++|.. +.+.+||+|++ |-+|..+|.... .+-++...+.+|++||+.||.|||.+|
T Consensus 133 ~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~---YrGlpl~~VK~I~~qvL~GLdYLH~ec- 207 (590)
T KOG1290|consen 133 EGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSN---YRGLPLSCVKEICRQVLTGLDYLHREC- 207 (590)
T ss_pred hcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhC---CCCCcHHHHHHHHHHHHHHHHHHHHhc-
Confidence 32 69999999875 45999999999 778999986554 345889999999999999999999974
Q ss_pred CCcccCCCCCCceEe
Q 003059 621 DCIVHCDIKPENILL 635 (852)
Q Consensus 621 ~~ivH~Dlkp~NILl 635 (852)
+|||-||||+||||
T Consensus 208 -gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 208 -GIIHTDLKPENVLL 221 (590)
T ss_pred -CccccCCCcceeee
Confidence 79999999999999
No 389
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=245.35 Aligned_cols=243 Identities=23% Similarity=0.264 Sum_probs=187.5
Q ss_pred ccccccccceEEEEEE-CCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeecc----CceeeEEEeecCC
Q 003059 505 DKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSE----GKHRLLVYEFMKN 578 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~----~~~~~lV~e~~~~ 578 (852)
++||-|-.|.|-.... ..++..|+|++..... .++|+++--+. .|||||.+++++.. ....++|||.|+|
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meG 143 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK----ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEG 143 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcCHH----HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccc
Confidence 5799999999999885 4578899999875433 46677765444 69999999998754 4577899999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC---CCCceEEeecccccccCCC
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD---ENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DFGla~~~~~~ 655 (852)
|.|...+..+. ...++++++-.|..||+.|+.|||+ .+|.||||||+|+|.. .|-.+||+|||+|+....
T Consensus 144 GeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~- 216 (400)
T KOG0604|consen 144 GELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE- 216 (400)
T ss_pred hHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccccccccCC-
Confidence 99999996554 4568999999999999999999999 8999999999999995 456799999999997543
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccccc
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDK 735 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (852)
........-|+.|.|||++...+|+...|+||+||++|-||+|.+||......... --....+..
T Consensus 217 ---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais---pgMk~rI~~--------- 281 (400)
T KOG0604|consen 217 ---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---PGMKRRIRT--------- 281 (400)
T ss_pred ---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC---hhHHhHhhc---------
Confidence 23445567899999999999999999999999999999999999999654321100 000011111
Q ss_pred ccCCCCCCHHH----HHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 736 SLAGEDVDIEQ----VMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 736 ~l~~~~~~~~~----~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
....++.++ .+..-+++...+..+|.+|-|+.++...-
T Consensus 282 --gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 282 --GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred --cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 011222222 23455677788999999999999998643
No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.4e-29 Score=245.81 Aligned_cols=267 Identities=19% Similarity=0.264 Sum_probs=190.7
Q ss_pred cccccccccccccceEEEEEEC-CCcEEEEEEec--Ccccc-hHHHHHHHHHhhcccccceeeeeeeecc--------Cc
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLE--GIEQG-EKQFRMEVATISSTHHLNLVRLVGFSSE--------GK 567 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~--~~~~~-~~~f~~E~~~l~~l~h~niv~l~g~~~~--------~~ 567 (852)
+|.-..+||+|.||.||+|... .++.||+|++- ..+.+ -..-.+|+++|..++|+|++.++..|.. ..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 3334468999999999999854 47778888653 22222 2345789999999999999999998864 33
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
..||||++|+. +|.-+|... ...++..++.++..++..||.|+|. ..|+|||+||.|+||+.++.+||+|||
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~----~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR----KVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc----cccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccc
Confidence 57999999976 788777432 3458888999999999999999998 789999999999999999999999999
Q ss_pred cccccCCCCC-cceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHH-
Q 003059 648 LAKLINPKDH-RHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEF- 724 (852)
Q Consensus 648 la~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~- 724 (852)
+++.+...+. .....++.+-|..|.+||.+.+. .++++.|||+-||++.||.||.+-+..........++......+
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 9987653222 12223456678999999998765 78999999999999999999999887654333222222111100
Q ss_pred -------hhCCccccc--ccccCCCC-CCHHHHH------HHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 725 -------EKGNVKGIV--DKSLAGED-VDIEQVM------RAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 725 -------~~~~~~~~~--d~~l~~~~-~~~~~~~------~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.+-.+-..+ .+.-.+.. .-.+.+. ..++++..++..||.+|+++.+++..
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 000000000 00000000 0011111 46677788999999999999998753
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=4.5e-28 Score=261.33 Aligned_cols=209 Identities=25% Similarity=0.354 Sum_probs=171.2
Q ss_pred HHHHhcccccccccccccceEEEEEE-CCCcEEEEEEecCcc----cchHHHHHHHHHhhcccccceeeeeeeeccCcee
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE----QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHR 569 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~ 569 (852)
...+..+...+.||-|+||.|.++.. +....+|+|.+++.+ ......+.|-.||+....+-||+|+-.|.+++.+
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL 704 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 704 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce
Confidence 33333344456799999999999984 456789999987432 2334577899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 570 LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 570 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
|+||||++||++-.+|.+.. .+.+..+.-++.++..|+++.|. .|+|||||||+|||||.+|++||.||||+
T Consensus 705 YFVMdYIPGGDmMSLLIrmg-----IFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRMG-----IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred EEEEeccCCccHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeecccc
Confidence 99999999999999986543 47777888889999999999998 89999999999999999999999999998
Q ss_pred cccC---------CCCC------------------------------cceeeeeecCCCCCCChhhhhcCCCCCCccchh
Q 003059 650 KLIN---------PKDH------------------------------RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYS 690 (852)
Q Consensus 650 ~~~~---------~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s 690 (852)
.-++ ..++ .....-..+||+.|+|||++....++.-+|.||
T Consensus 777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws 856 (1034)
T KOG0608|consen 777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWS 856 (1034)
T ss_pred ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhH
Confidence 6442 1100 000111246999999999999999999999999
Q ss_pred hhHHHHHHHhCCccccccccc
Q 003059 691 YGMVLLEIVSGRRNFEVSQET 711 (852)
Q Consensus 691 ~Gvvl~elltG~~p~~~~~~~ 711 (852)
.|||||||+.|+.||-.....
T Consensus 857 ~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 857 VGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred hhHHHHHHhhCCCCccCCCCC
Confidence 999999999999999765443
No 392
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=260.48 Aligned_cols=242 Identities=23% Similarity=0.289 Sum_probs=193.9
Q ss_pred cccccccccceEEEEEECCCc-EEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 504 KDKLGAGGFGAVYRGVLANRT-VVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~-~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
...||-||||.|=++..+... ..|+|.+++. ....+....|-.+|...+.|.||+++--|.+.++.|++||-|-|
T Consensus 425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG 504 (732)
T KOG0614|consen 425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG 504 (732)
T ss_pred hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence 356999999999999876644 3788877632 23345567899999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|.|...|..+. .++..+..-++..+.+|++|||. ++||+|||||+|.+||.+|-+||.|||+|+.+..
T Consensus 505 GElWTiLrdRg-----~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~---- 572 (732)
T KOG0614|consen 505 GELWTILRDRG-----SFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS---- 572 (732)
T ss_pred chhhhhhhhcC-----CcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhcc----
Confidence 99999996543 36777777889999999999998 9999999999999999999999999999998854
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
........||+.|.|||++.+...+..+|.|+||++++|||+|++||...++...-.++.-..+.+
T Consensus 573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-------------- 638 (732)
T KOG0614|consen 573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-------------- 638 (732)
T ss_pred CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh--------------
Confidence 234567899999999999999999999999999999999999999998766543222211111111
Q ss_pred CCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 003059 739 GEDVDIEQVMRAIQVSFWCIQEQPSQRPM-----MGKVVQ 773 (852)
Q Consensus 739 ~~~~~~~~~~~~~~l~~~cl~~dp~~RPt-----~~ev~~ 773 (852)
.++..-.....+++.+.+..+|.+|-- ..+|.+
T Consensus 639 --~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk 676 (732)
T KOG0614|consen 639 --EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK 676 (732)
T ss_pred --hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh
Confidence 223333445667777778889999975 455554
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1e-28 Score=242.18 Aligned_cols=261 Identities=23% Similarity=0.325 Sum_probs=190.6
Q ss_pred cccccccccceEEEEEE-CCCcEEEEEEecCcc---cchHHHHHHHHHhhcccccceeeeeeeeccC-----ceeeEEEe
Q 003059 504 KDKLGAGGFGAVYRGVL-ANRTVVAVKQLEGIE---QGEKQFRMEVATISSTHHLNLVRLVGFSSEG-----KHRLLVYE 574 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~lV~e 574 (852)
.+-||-|+||.||..++ ++++.|++|++...- ...+.+.+|+++|.-.+|.|++..+++..-. .+.|+|.|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 35699999999999986 578999999987433 3457788999999999999999988865432 26788899
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
.| ..+|.+.|. +...|+-..+.-+.+||++||+|||+ .+|.||||||.|.|++.|...||+|||+++....
T Consensus 138 Lm-QSDLHKIIV-----SPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 138 LM-QSDLHKIIV-----SPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HH-Hhhhhheec-----cCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccch
Confidence 88 447777664 34568888888899999999999999 7999999999999999999999999999997655
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHH--------HHHHh
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWA--------YEEFE 725 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~ 725 (852)
+ ....++..+-|..|.|||.+++. .|+...||||.||++.||+..+..|....+.....++... .+..-
T Consensus 209 d--~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 209 R--DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred h--hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 3 23345556678899999999876 6899999999999999999999888765544333222111 00001
Q ss_pred hCCcccccccccCCCC--------CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 726 KGNVKGIVDKSLAGED--------VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~--------~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
++....++........ .+...-.+.+.+...++..||..|.+.++.+..+
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111112211111100 0111222344566668899999999888877644
No 394
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=4e-26 Score=232.14 Aligned_cols=209 Identities=34% Similarity=0.558 Sum_probs=181.9
Q ss_pred ccccccceEEEEEECC-CcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHHH
Q 003059 507 LGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLDN 583 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 583 (852)
||+|.+|.||++...+ ++.+++|++..... ..+.+.+|++.+++++|++|+++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999764 88899999985444 35789999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeecccccccCCCCCcceee
Q 003059 584 FLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKLINPKDHRHRTL 662 (852)
Q Consensus 584 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~ 662 (852)
++.... ..+++..+..++.+++++|++||+ .+++|+||+|.||+++. ++.++|+|||.+........ ..
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~~ 150 (215)
T cd00180 81 LLKENE----GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---LL 150 (215)
T ss_pred HHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---hh
Confidence 985432 358899999999999999999999 79999999999999999 89999999999987644221 12
Q ss_pred eeecCCCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCC
Q 003059 663 TSVRGTRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGED 741 (852)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (852)
....+...|++||.+... ..+.+.|+|++|+++++|
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 334578889999999887 888999999999999998
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 742 VDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 742 ~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
..+.+++..|++.+|.+||++.++++.
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 356678888999999999999998864
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4e-27 Score=236.81 Aligned_cols=244 Identities=20% Similarity=0.287 Sum_probs=187.0
Q ss_pred ccccccccccccceEEEEEEC-CCcEEEEEEecC----cccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEe
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEG----IEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYE 574 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~----~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e 574 (852)
+++...||+|.|..|..+.+. ..+.+|+|++++ ..+..+-.+.|-.+..+. +||.+|.++.+|..+...+.|.|
T Consensus 252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvie 331 (593)
T KOG0695|consen 252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIE 331 (593)
T ss_pred ceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEE
Confidence 455678999999999999864 577899998873 233334456676666655 79999999999999999999999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
|+++|+|--++... +.|+++.+.-+...|.-||.|||+ ++||.||||..|||||..|++||.|+|+++.--.
T Consensus 332 yv~ggdlmfhmqrq-----rklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 332 YVNGGDLMFHMQRQ-----RKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EecCcceeeehhhh-----hcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999997777543 348888888899999999999999 9999999999999999999999999999986433
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccc-hhhHHHHHHHHhhCCccccc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNR-KKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~ 733 (852)
.. .......||+.|+|||.+++..|....|.|+|||+++||+.|+.||+.-...+. .+..++....+.
T Consensus 404 ~g---d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvil-------- 472 (593)
T KOG0695|consen 404 PG---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL-------- 472 (593)
T ss_pred CC---cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHh--------
Confidence 22 234568899999999999999999999999999999999999999985432221 112222222221
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCC
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRP 766 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RP 766 (852)
.+.++ .+..-..+...+...-+++||.+|.
T Consensus 473 ekqir---iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 473 EKQIR---IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhccc---ccceeehhhHHHHHHhhcCCcHHhc
Confidence 12111 1111122344556668889999884
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=3.9e-27 Score=252.69 Aligned_cols=193 Identities=25% Similarity=0.318 Sum_probs=165.5
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEecCcccchH---------HHHHHHHHhhccc---ccceeeeeeeeccCc
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEK---------QFRMEVATISSTH---HLNLVRLVGFSSEGK 567 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~---------~f~~E~~~l~~l~---h~niv~l~g~~~~~~ 567 (852)
|...+.+|+|+||.|+.++++. ...|+||++.+.+.-.+ ..-.|++||+.++ |+||++++++|++++
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd 642 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD 642 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence 4456789999999999999654 66789998875432222 2446999999997 999999999999999
Q ss_pred eeeEEEeec-CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeec
Q 003059 568 HRLLVYEFM-KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDF 646 (852)
Q Consensus 568 ~~~lV~e~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 646 (852)
++||+||-. ++-+|.++|..+ +.+++.+...|++||+.|+++||+ .+|||||||-+||.++.+|-+||+||
T Consensus 643 ~yyl~te~hg~gIDLFd~IE~k-----p~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFIEFK-----PRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred eeEEEecCCCCCcchhhhhhcc-----CccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeec
Confidence 999999987 677999999543 458899999999999999999999 89999999999999999999999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCChhhhhcCCC-CCCccchhhhHHHHHHHhCCcccc
Q 003059 647 GLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPI-TSKSDVYSYGMVLLEIVSGRRNFE 706 (852)
Q Consensus 647 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltG~~p~~ 706 (852)
|.+...... .....+||..|.|||++.+.+| ...-|||++|++||-++-...||.
T Consensus 715 gsaa~~ksg-----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSG-----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCC-----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999876432 3456789999999999999887 456899999999999999888874
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-26 Score=226.63 Aligned_cols=251 Identities=19% Similarity=0.319 Sum_probs=188.7
Q ss_pred cccccccccccccceEEEEEECC-CcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeee-eccCceeeEEEeec
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGF-SSEGKHRLLVYEFM 576 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~-~~~~~~~~lV~e~~ 576 (852)
.|++.+.||+|.||.+-++..+. ++.+++|.+.......++|.+|...--.| .|.||+.-++. |...+.++.++||+
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~a 104 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFA 104 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccC
Confidence 56778899999999999999765 67899999998888889999999875555 69999988774 66777889999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC--CCCceEEeecccccccCC
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD--ENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~--~~~~~kl~DFGla~~~~~ 654 (852)
|.|+|..-+.. ..+.+....+++.|+++||.|+|+ +++||||||.+||||- +..++||+|||+.+....
T Consensus 105 P~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 105 PRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999987743 336777788999999999999999 8999999999999993 445899999999885432
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcC-----CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANL-----PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNV 729 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (852)
.......+..|.+||..... ...+.+|||.||++++.++||..||+.....+. ..|.+..+..+..
T Consensus 176 ------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~---~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 176 ------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK---PYWEWEQWLKRKN 246 (378)
T ss_pred ------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc---hHHHHHHHhcccC
Confidence 22233356679999987533 356789999999999999999999984333222 2344555554443
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHH
Q 003059 730 KGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQML 775 (852)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L 775 (852)
..+.+.- . .+. .++.++..+-+..++++|-...++.++-
T Consensus 247 ~~~P~~F-~--~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 247 PALPKKF-N--PFS----EKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred ccCchhh-c--ccC----HHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 3222211 1 122 2344555667889999996555555443
No 398
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=8.3e-27 Score=247.01 Aligned_cols=213 Identities=25% Similarity=0.281 Sum_probs=184.5
Q ss_pred CCCcccCHHHHHHhcccccccccccccceEEEEEEC-CCcEEEEEEecCcccchHHHHHHHHHhhccc------ccceee
Q 003059 486 GAPVQFSYKELQRSTKGFKDKLGAGGFGAVYRGVLA-NRTVVAVKQLEGIEQGEKQFRMEVATISSTH------HLNLVR 558 (852)
Q Consensus 486 ~~~~~~~~~el~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~------h~niv~ 558 (852)
+++.++.+.|+...+|.+.-..|+|-|++|.+|... -+..||||++...+...+.=+.|+++|.+|+ .-|+++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 456778899999999999999999999999999864 3679999999988777788889999999996 338999
Q ss_pred eeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC
Q 003059 559 LVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN 638 (852)
Q Consensus 559 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~ 638 (852)
|+-.|.+.+++|||+|-+ ..+|.+.|.+... .-.|....+..++.|+.-||..|.. .+|+|.||||.|||+++.
T Consensus 499 l~r~F~hknHLClVFE~L-slNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNES 572 (752)
T ss_pred HHHHhhhcceeEEEehhh-hchHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccC
Confidence 999999999999999988 6699999977654 4458888999999999999999998 899999999999999875
Q ss_pred -CceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccc
Q 003059 639 -YNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQ 709 (852)
Q Consensus 639 -~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~ 709 (852)
..+||||||.|......+- +...-...|.|||++.+.+|+...|+||.||+||||.||+..|.+..
T Consensus 573 k~iLKLCDfGSA~~~~enei-----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~T 639 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENEI-----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRT 639 (752)
T ss_pred cceeeeccCccccccccccc-----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCC
Confidence 5579999999987654322 22334567999999999999999999999999999999999987653
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=3.5e-25 Score=228.55 Aligned_cols=197 Identities=33% Similarity=0.467 Sum_probs=170.4
Q ss_pred cccccccccccceEEEEEECC-CcEEEEEEecCccc--chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCC
Q 003059 502 GFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQ--GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKN 578 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 578 (852)
.+.+.||.|++|.||++...+ ++.+++|.+..... ..+.+.+|++.+.+++|+|++++++++......++++||+++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 456789999999999999865 78899999984433 467889999999999999999999999999999999999999
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
++|.+++..... .+++..+..++.+++.+|.+||+ .+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-- 152 (225)
T smart00221 82 GDLFDYLRKKGG----KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL-- 152 (225)
T ss_pred CCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc--
Confidence 999999864321 17889999999999999999998 799999999999999999999999999998765432
Q ss_pred ceeeeeecCCCCCCChhhh-hcCCCCCCccchhhhHHHHHHHhCCccccc
Q 003059 659 HRTLTSVRGTRGYLAPEWL-ANLPITSKSDVYSYGMVLLEIVSGRRNFEV 707 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~-~~~~~s~ksDv~s~Gvvl~elltG~~p~~~ 707 (852)
........++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0122345577889999998 666788899999999999999999999964
No 400
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=3.2e-25 Score=212.80 Aligned_cols=257 Identities=18% Similarity=0.310 Sum_probs=185.6
Q ss_pred hcccccccccccccceEEEEE-ECCCcEEEEEEecCcccchHHHHHHHHHhhccc-ccceeeeeeeeccC--ceeeEEEe
Q 003059 499 STKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQGEKQFRMEVATISSTH-HLNLVRLVGFSSEG--KHRLLVYE 574 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~--~~~~lV~e 574 (852)
..|.+.+++|+|.++.||.|. ..++..++||+++..+ .+.+.+|+++|..|. ||||++|++...+. ....||+|
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 356667899999999999998 5667889999998443 467899999999997 99999999988764 46789999
Q ss_pred ecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeecccccccC
Q 003059 575 FMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKLIN 653 (852)
Q Consensus 575 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~ 653 (852)
|+.+.+...+- +.|+-..+.-.+.++++||.|+|+ .||.|||+||.|++||. .-..+|+|+|+|....
T Consensus 116 ~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 116 YVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 99998876654 236667778899999999999999 89999999999999985 4569999999999887
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHH----H----H
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYE----E----F 724 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~----~----~ 724 (852)
+.... .-.+.+..|--||.+-. ..++..-|+|||||+|.+|+..+.||-...+ +...++..+.. + +
T Consensus 185 p~~eY----nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d-N~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 185 PGKEY----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD-NYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred CCcee----eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC-CHHHHHHHHHHhChHHHHHHH
Confidence 64322 22334566888998865 4578889999999999999999999853321 22222222210 0 0
Q ss_pred ------hhCCcccccccccCCC---CC-C-HH--HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 725 ------EKGNVKGIVDKSLAGE---DV-D-IE--QVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 725 ------~~~~~~~~~d~~l~~~---~~-~-~~--~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
......+++....+.. .. + .. ...++++++-..+..|-.+|||++|...
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0111111111110000 00 0 00 0135667777788999999999998764
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=2.6e-25 Score=242.58 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=192.7
Q ss_pred cccccccccccccceEEEEEE-CCCcEEEEEEec-CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecC
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL-ANRTVVAVKQLE-GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~-~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.|.+..++|.|.+|.|||++. ..+...|+|+++ ......+-.++|+-+++..+|+|||.++|.+......++.||||.
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycg 95 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCG 95 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecC
Confidence 466678999999999999995 568889999998 444555667889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+|+|++.-+.. .++++.++..+.+...+||+|||. .+=+|||||-.|||+.+.|.+|++|||.+-.+..
T Consensus 96 ggslQdiy~~T-----gplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqita--- 164 (829)
T KOG0576|consen 96 GGSLQDIYHVT-----GPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--- 164 (829)
T ss_pred CCcccceeeec-----ccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhh---
Confidence 99999977644 358888888999999999999999 7789999999999999999999999999876542
Q ss_pred cceeeeeecCCCCCCChhhh---hcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWL---ANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVD 734 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~---~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (852)
.........||+.|||||+. +.+.|..++|||+.|+...|+-.-+.|.-...... +.... .+..++
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-------~l~Lm----TkS~~q 233 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-------ALFLM----TKSGFQ 233 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-------HHHHh----hccCCC
Confidence 22233557799999999987 45678999999999999999988777743211110 00000 111122
Q ss_pred cccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 003059 735 KSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVV 772 (852)
Q Consensus 735 ~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~ 772 (852)
+.-. .........+-+++..|+..+|++||+++.++
T Consensus 234 pp~l--kDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 234 PPTL--KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred CCcc--cCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 1111 11122334455667779999999999987654
No 402
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=99.91 E-value=7.9e-24 Score=193.75 Aligned_cols=110 Identities=37% Similarity=0.583 Sum_probs=97.5
Q ss_pred CccccCCCCCccccCCCceEEEEEecCCCC-eeEEEEEeC--CeeEEeeCC-CCCCCCceEEEeeCccEEEEcCCCceEe
Q 003059 37 SSLSASNLNQSWPSPNSTFSLSFIQRSPNS-FIPAITYSG--GVPIWTAGS-TPVDSSAFFQLHSSGTLRLISGSGAIIW 112 (852)
Q Consensus 37 ~~l~~~~~~~~l~S~~g~f~lgf~~~~~~~-~~~~i~~~~--~~~vW~an~-~p~~~~~~l~~~~~g~l~l~~~~~~~vW 112 (852)
+.|..++ +|+|++|.|++|||...... ++.+|||.. .++||+||+ .|....+.|.|+.||||+|+|.+|.+||
T Consensus 2 ~~l~~~~---~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW 78 (116)
T cd00028 2 NPLSSGQ---TLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVW 78 (116)
T ss_pred cCcCCCC---EEEeCCCcEEEecccCCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEE
Confidence 3566666 89999999999999998776 999999944 489999998 5667788999999999999999999999
Q ss_pred eccCCC-CceeEEEEcCCccEEEecCCCccccccCCCC
Q 003059 113 DSNTQR-LNVTSASLDDSGNLVLLKNGGVSAWSSFDNP 149 (852)
Q Consensus 113 st~~~~-~~~~~~~l~d~GNlvl~~~~~~~lWQSFD~P 149 (852)
+|++.+ ....+|+|+|||||||++.++.++|||||||
T Consensus 79 ~S~~~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~P 116 (116)
T cd00028 79 SSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP 116 (116)
T ss_pred EecccCCCCceEEEEeCCCCEEEECCCCCEEEcCCCCC
Confidence 999876 4556899999999999999999999999999
No 403
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.90 E-value=7.4e-25 Score=220.95 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=181.3
Q ss_pred cccccccceEEEEEE-CCCcEEEEEEecCc---ccchHHHHHHHHHhhcccccceeeeeeeeccCc------eeeEEEee
Q 003059 506 KLGAGGFGAVYRGVL-ANRTVVAVKQLEGI---EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGK------HRLLVYEF 575 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~------~~~lV~e~ 575 (852)
-+|.|.- .|-.+.+ -.+++||+|++... ....+.-.+|...+..++|+||++++.+++-.. ..|+|||+
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~ 102 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMEL 102 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHh
Confidence 4666665 3444432 23678999987632 233456788999999999999999999987543 67999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
| ..+|...+. ..++-+.+..|..|++.|++|||+ .+|+||||||+||++..+..+||.|||+++.....
T Consensus 103 m-~~nl~~vi~-------~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 103 M-DANLCQVIL-------MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred h-hhHHHHHHH-------HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhcccCcc
Confidence 9 568888885 237778888999999999999999 89999999999999999999999999999865432
Q ss_pred CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhh----------------HHH
Q 003059 656 DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKF----------------SLW 719 (852)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l----------------~~~ 719 (852)
-.++....|.-|.|||++.+..+.+.+||||.||++.||++|+.-|.+....+.-.. ...
T Consensus 172 ----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 172 ----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred ----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 345567789999999999998899999999999999999999998875432221100 000
Q ss_pred HHH------HHhhCCccccc-ccccCCC-CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 720 AYE------EFEKGNVKGIV-DKSLAGE-DVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 720 ~~~------~~~~~~~~~~~-d~~l~~~-~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
+.. +...-...+.+ |...... ..+.-....+.+++.++|-.+|++|-+.+++++
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000 00000001111 1111100 011112234567888999999999999999986
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=1e-24 Score=266.48 Aligned_cols=198 Identities=17% Similarity=0.232 Sum_probs=140.1
Q ss_pred hcccc-cceeeeeeee-------ccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccC
Q 003059 549 SSTHH-LNLVRLVGFS-------SEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECR 620 (852)
Q Consensus 549 ~~l~h-~niv~l~g~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 620 (852)
+.++| +||++++++| .+.+..++++||+ +++|.++|... ...+++.+++.++.||++||+|||+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~--- 98 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHS--- 98 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHh---
Confidence 35566 6888899987 3334678889988 66999999532 3458999999999999999999998
Q ss_pred CCcccCCCCCCceEeCC-------------------CCceEEeecccccccCCCCCc-------------ceeeeeecCC
Q 003059 621 DCIVHCDIKPENILLDE-------------------NYNAKVSDFGLAKLINPKDHR-------------HRTLTSVRGT 668 (852)
Q Consensus 621 ~~ivH~Dlkp~NILl~~-------------------~~~~kl~DFGla~~~~~~~~~-------------~~~~~~~~gt 668 (852)
++|+||||||+||||+. ++.+||+|||+++........ ........||
T Consensus 99 ~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 99 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 89999999999999965 445566666666532110000 0001123578
Q ss_pred CCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHH
Q 003059 669 RGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVM 748 (852)
Q Consensus 669 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 748 (852)
+.|||||++.+..++.++|||||||+||||++|..|+..... . ...+... .+.+. ......
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~-----~~~~~~~----~~~~~------~~~~~~ 239 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----T-----MSSLRHR----VLPPQ------ILLNWP 239 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----H-----HHHHHHh----hcChh------hhhcCH
Confidence 889999999999999999999999999999999888652210 0 0011100 01110 011223
Q ss_pred HHHHHHHhccccCCCCCCCHHHHHH
Q 003059 749 RAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 749 ~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
....++.+||+.+|.+||+|.||++
T Consensus 240 ~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 240 KEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHHhCCCChhhCcChHHHhh
Confidence 4557788899999999999999975
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=1.1e-23 Score=220.70 Aligned_cols=196 Identities=26% Similarity=0.371 Sum_probs=161.6
Q ss_pred ccccccccccccceEEEEEEC----CCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLA----NRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+...++||+|.|++||++++. ..+.||+|.+.... .-..+.+|++.|..+ .+.||+++.+++..++...+|+||
T Consensus 38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~ 116 (418)
T KOG1167|consen 38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPY 116 (418)
T ss_pred hhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecc
Confidence 445689999999999999853 46789999987332 234688999999998 599999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-CCceEEeecccccccCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKLINP 654 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~ 654 (852)
++.....+++. .++...+...+..+..||+++|. .|||||||||+|+|.+. .++-.|.|||+|.....
T Consensus 117 ~~H~~f~~l~~--------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 117 FEHDRFRDLYR--------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred cCccCHHHHHh--------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 99999999884 26688888999999999999999 89999999999999975 57789999999972110
Q ss_pred C-----------------------------------------CCcceeeeeecCCCCCCChhhhhc-CCCCCCccchhhh
Q 003059 655 K-----------------------------------------DHRHRTLTSVRGTRGYLAPEWLAN-LPITSKSDVYSYG 692 (852)
Q Consensus 655 ~-----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDv~s~G 692 (852)
. +..........||++|.|||++.. ...++++||||-|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 0 001111223569999999999864 4678999999999
Q ss_pred HHHHHHHhCCcccccc
Q 003059 693 MVLLEIVSGRRNFEVS 708 (852)
Q Consensus 693 vvl~elltG~~p~~~~ 708 (852)
|+++-+++++.||-..
T Consensus 266 VI~Lslls~~~PFf~a 281 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKA 281 (418)
T ss_pred ceeehhhccccccccC
Confidence 9999999999998544
No 406
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=9.5e-23 Score=206.18 Aligned_cols=270 Identities=20% Similarity=0.279 Sum_probs=205.2
Q ss_pred cccccccccccccceEEEEE-ECCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeeeeccCceeeEEEeecC
Q 003059 500 TKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.|.+.++||+|.||.++.|+ +-++++||||.-. .+....++..|....+.| ..++|..++-|..++.+-.||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP-rkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP-RKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecc-ccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 46778999999999999998 6678999999654 334456788888888877 5889999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-----CCceEEeeccccccc
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-----NYNAKVSDFGLAKLI 652 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-----~~~~kl~DFGla~~~ 652 (852)
|.||+|+..- .++.++.+++..||.|++.-++|+|+ +.+|.|||||+|+||.. ...+.|+|||+|+.+
T Consensus 107 GPSLEDLFD~----CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 107 GPSLEDLFDL----CGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred CcCHHHHHHH----hcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 8899998742 35679999999999999999999999 88999999999999964 345899999999987
Q ss_pred CCCCCcce----eeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 653 NPKDHRHR----TLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 653 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
........ ......||.+||+-..+.+.+.+.+.|+-|||-|+++.|-|..||.+....... ..++++.+.+
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK----~kYeKIGe~K 255 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK----EKYEKIGETK 255 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH----HHHHHhcccc
Confidence 65332221 223456999999999999999999999999999999999999999865433221 1334444443
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCCCCCCCC
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIEKPPAPK 788 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~~~~~~~ 788 (852)
-.--++.+..+ -++++...++.+ -..+..+-|+.+-+...+..+.+....-...
T Consensus 256 r~T~i~~Lc~g---~P~efa~Yl~yv---R~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg 309 (449)
T KOG1165|consen 256 RSTPIEVLCEG---FPEEFATYLRYV---RRLDFFETPDYDYLRKLFDDVLDRLGETDDG 309 (449)
T ss_pred ccCCHHHHHhc---CHHHHHHHHHHH---HhcCcccCCCHHHHHHHHHHHHHhcCCcccc
Confidence 33334444433 233444444443 3457888899988887776665544333333
No 407
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=99.89 E-value=9.5e-23 Score=186.11 Aligned_cols=109 Identities=34% Similarity=0.530 Sum_probs=95.9
Q ss_pred CccccCCCCCccccCCCceEEEEEecCCCCeeEEEEEeC--CeeEEeeCC-CCCCCCceEEEeeCccEEEEcCCCceEee
Q 003059 37 SSLSASNLNQSWPSPNSTFSLSFIQRSPNSFIPAITYSG--GVPIWTAGS-TPVDSSAFFQLHSSGTLRLISGSGAIIWD 113 (852)
Q Consensus 37 ~~l~~~~~~~~l~S~~g~f~lgf~~~~~~~~~~~i~~~~--~~~vW~an~-~p~~~~~~l~~~~~g~l~l~~~~~~~vWs 113 (852)
+.|..++ .|+|++|.|++|||......++.+|||.. .++||+||+ .|+..++.|.|..||||+|+|.+|.+||+
T Consensus 2 ~~l~~~~---~l~s~~~~f~~G~~~~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~ 78 (114)
T smart00108 2 NTLSSGQ---TLVSGNSLFELGFFTLIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWS 78 (114)
T ss_pred cccCCCC---EEecCCCcEeeeccccCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEE
Confidence 3466666 89999999999999998778999999954 489999998 57666689999999999999999999999
Q ss_pred ccCC-CCceeEEEEcCCccEEEecCCCccccccCCC
Q 003059 114 SNTQ-RLNVTSASLDDSGNLVLLKNGGVSAWSSFDN 148 (852)
Q Consensus 114 t~~~-~~~~~~~~l~d~GNlvl~~~~~~~lWQSFD~ 148 (852)
|++. +....+++|+|+|||||++..+.++||||||
T Consensus 79 S~t~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~ 114 (114)
T smart00108 79 SNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY 114 (114)
T ss_pred ecccCCCCceEEEEeCCCCEEEECCCCCEEeCCCCC
Confidence 9987 4455689999999999999999999999997
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=9.2e-22 Score=214.79 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=194.9
Q ss_pred cccccccccccccceEEEEEECCC--cEEEEEEecCcc-cchHHHHHHHHHhhcccc----cceeeeeeee-ccCceeeE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLANR--TVVAVKQLEGIE-QGEKQFRMEVATISSTHH----LNLVRLVGFS-SEGKHRLL 571 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~l~~~~-~~~~~f~~E~~~l~~l~h----~niv~l~g~~-~~~~~~~l 571 (852)
.|.+.++||+|+||.||++..... ..+|+|...... .....+..|+.++..+.+ +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 677889999999999999996553 478888776432 222378889999988873 5899999988 57889999
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC-----CceEEeec
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN-----YNAKVSDF 646 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~-----~~~kl~DF 646 (852)
||+.+ |.+|.++..... ...++..+.++|+.|++.+|++||+ .+++||||||.|+++... ..+.|.||
T Consensus 99 VM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 99998 889999775443 4568999999999999999999999 899999999999999865 46999999
Q ss_pred cccc--ccCCCCCc----cee-eeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHH
Q 003059 647 GLAK--LINPKDHR----HRT-LTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLW 719 (852)
Q Consensus 647 Gla~--~~~~~~~~----~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~ 719 (852)
|+++ .+...... .+. ....+||.+|++++.+.+.+.+++.|+||++.++.|++.|..||.........
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~----- 246 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK----- 246 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH-----
Confidence 9998 33221111 111 23466999999999999999999999999999999999999999655432211
Q ss_pred HHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCccCC
Q 003059 720 AYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGITEIE 782 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~~~~ 782 (852)
..+........... .....+.+...+... +-..+..++|....+...|+......
T Consensus 247 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 247 --SKFEKDPRKLLTDR---FGDLKPEEFAKILEY---IDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred --HHHHHHhhhhcccc---ccCCChHHHHHHHHH---hhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 11111111111111 112233344333333 44579999999999999987765544
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=1e-22 Score=202.31 Aligned_cols=166 Identities=22% Similarity=0.310 Sum_probs=124.2
Q ss_pred CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCc
Q 003059 579 GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHR 658 (852)
Q Consensus 579 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 658 (852)
|+|.+++... +..+++..++.|+.||++||+|||+ .+ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~--- 62 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE--- 62 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc---
Confidence 6899999643 3459999999999999999999998 33 999999999999999 9999865432
Q ss_pred ceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccC
Q 003059 659 HRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLA 738 (852)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (852)
...|++.|+|||++.+..++.++|||||||++|||++|+.||....... ..+... ... .. +...
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~-----~~~----~~-~~~~ 126 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEIL-----LNG----MP-ADDP 126 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHH-----HHH----hc-cCCc
Confidence 1258899999999999999999999999999999999999996432211 111110 000 00 0000
Q ss_pred CCCCCHHHH---HHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 739 GEDVDIEQV---MRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 739 ~~~~~~~~~---~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
......... ..+.+++.+|++.+|.+||++.++++.+..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 127 RDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred cccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 001112222 2588999999999999999999999987654
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=7.9e-23 Score=198.07 Aligned_cols=265 Identities=20% Similarity=0.283 Sum_probs=205.5
Q ss_pred HHHHhcccccccccccccceEEEEE-ECCCcEEEEEEecCcccchHHHHHHHHHhhcccc-cceeeeeeeeccCceeeEE
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGV-LANRTVVAVKQLEGIEQGEKQFRMEVATISSTHH-LNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lV 572 (852)
.|....|.+.++||.|.||.+|.|. +.+|.+||||.-. ......++..|..+...|+| ..|..+.-|..++.+-.||
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es-~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLES-SKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeec-ccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 3455678899999999999999998 6789999999765 33445678889999999975 4677788888899999999
Q ss_pred EeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC---CCceEEeecccc
Q 003059 573 YEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE---NYNAKVSDFGLA 649 (852)
Q Consensus 573 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DFGla 649 (852)
||.+ |.||++++.-. .+.++..+++-++.|++.-++|+|. +++|||||||+|+|..- ...+.|+|||++
T Consensus 90 MdLL-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eecc-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccch
Confidence 9999 88999988533 3458889999999999999999998 89999999999999964 356899999999
Q ss_pred cccCCCCCcc----eeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHh
Q 003059 650 KLINPKDHRH----RTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFE 725 (852)
Q Consensus 650 ~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 725 (852)
+.+....... +...+..||.+|.+-..+.+.+.+.+.|+-|+|.+|....-|..||++....... -.++.+.
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~----QKyEkI~ 237 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKK----QKYEKIS 237 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHH----HHHHHHH
Confidence 8765422211 1223466999999999999999999999999999999999999999876433222 2344555
Q ss_pred hCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 726 KGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
+.++.-.+.....+. +. ++...+.-|-..-.++-|+..-+.+.+.-+
T Consensus 238 EkK~s~~ie~LC~G~--P~----EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 238 EKKMSTPIEVLCKGF--PA----EFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred HhhcCCCHHHHhCCC--cH----HHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 555555555555542 22 223334458888889999988877776544
No 411
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=99.88 E-value=1.7e-23 Score=189.68 Aligned_cols=89 Identities=36% Similarity=0.645 Sum_probs=66.4
Q ss_pred CCeeEEeeCC-CCC-C--CCceEEEeeCccEEEEcCCCceEeec-cCCCCc--eeEEEEcCCccEEEecCCCccccccCC
Q 003059 75 GGVPIWTAGS-TPV-D--SSAFFQLHSSGTLRLISGSGAIIWDS-NTQRLN--VTSASLDDSGNLVLLKNGGVSAWSSFD 147 (852)
Q Consensus 75 ~~~~vW~an~-~p~-~--~~~~l~~~~~g~l~l~~~~~~~vWst-~~~~~~--~~~~~l~d~GNlvl~~~~~~~lWQSFD 147 (852)
++|+||+||| .|+ + ....|.|+.||||+|+|.++..||++ ++.+.+ ...|+|+|+|||||+|..+.++|||||
T Consensus 1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~ 80 (114)
T PF01453_consen 1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD 80 (114)
T ss_dssp ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence 3689999998 577 3 35899999999999999999999999 555443 678999999999999999999999999
Q ss_pred CCCCcccCCCccccCc
Q 003059 148 NPTDTIVPSQNFTSDK 163 (852)
Q Consensus 148 ~PTDtlLpg~kl~~~~ 163 (852)
|||||+||+|+|+.+.
T Consensus 81 ~ptdt~L~~q~l~~~~ 96 (114)
T PF01453_consen 81 YPTDTLLPGQKLGDGN 96 (114)
T ss_dssp SSS-EEEEEET--TSE
T ss_pred CCccEEEeccCcccCC
Confidence 9999999999998653
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=3.8e-22 Score=216.99 Aligned_cols=174 Identities=21% Similarity=0.199 Sum_probs=132.9
Q ss_pred HHhcccccccccccccceEEEEEEC--CCcEEEEEEecCc------ccchHHHHHHHHHhhcccccceee-eeeeeccCc
Q 003059 497 QRSTKGFKDKLGAGGFGAVYRGVLA--NRTVVAVKQLEGI------EQGEKQFRMEVATISSTHHLNLVR-LVGFSSEGK 567 (852)
Q Consensus 497 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~------~~~~~~f~~E~~~l~~l~h~niv~-l~g~~~~~~ 567 (852)
....|.+.+.||+|+||.||+|... +++.||||++... ......|.+|+++|.+++|+|+++ ++++ +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 3456788899999999999999864 5777899987522 123456899999999999999985 4432 4
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCC-CCCceEeCCCCceEEeec
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDI-KPENILLDENYNAKVSDF 646 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NILl~~~~~~kl~DF 646 (852)
..+|||||+++++|.. +. . .. ...++.+++++|.|||+ ++|+|||| ||+|||++.++++||+||
T Consensus 92 ~~~LVmE~~~G~~L~~-~~--~---~~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-AR--P---HG------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CcEEEEEccCCCCHHH-hC--c---cc------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 5799999999999963 21 0 00 14678899999999999 89999999 999999999999999999
Q ss_pred ccccccCCCCCcce-----eeeeecCCCCCCChhhhhcCC------CCCCccch
Q 003059 647 GLAKLINPKDHRHR-----TLTSVRGTRGYLAPEWLANLP------ITSKSDVY 689 (852)
Q Consensus 647 Gla~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~s~ksDv~ 689 (852)
|+++.+........ ......+++.|+|||.+...+ .+...|-|
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99997765432222 113566888999999885332 33446766
No 413
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=6.5e-23 Score=201.47 Aligned_cols=250 Identities=20% Similarity=0.343 Sum_probs=187.2
Q ss_pred hcccccccccccccceEEEEEECCCcEEEEEEec---CcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 499 STKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLE---GIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 499 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~---~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
...++.-+|.+...|..|+|++.++. +++|++. ......++|..|.-.|+.+.||||+.++|.|....+..+|..|
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~ 268 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQGND-IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY 268 (448)
T ss_pred hhhhhhhhhccCCCcccccccccCcc-hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence 34456678999999999999997765 5567765 2334457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEe--ecccccccC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVS--DFGLAKLIN 653 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~--DFGla~~~~ 653 (852)
|+.|||...|+... +-..+..+..+++.+||+|++|||+-. +-|.---|.+..|+||++.+++|+ |--++.
T Consensus 269 mp~gslynvlhe~t---~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf--- 341 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF--- 341 (448)
T ss_pred ccchHHHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee---
Confidence 99999999997543 456788899999999999999999854 335555799999999999998885 221111
Q ss_pred CCCCcceeeeeecCCCCCCChhhhhcCCCC---CCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcc
Q 003059 654 PKDHRHRTLTSVRGTRGYLAPEWLANLPIT---SKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVK 730 (852)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s---~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (852)
......-.+.||+||.++..+-+ ..+|+|||.+++|||.|...||......+-... + .++
T Consensus 342 -------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk-------i---ale 404 (448)
T KOG0195|consen 342 -------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK-------I---ALE 404 (448)
T ss_pred -------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh-------h---hhc
Confidence 11122346789999999877544 478999999999999999999975543221110 0 011
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcCc
Q 003059 731 GIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~~ 779 (852)
. +.. ..++-....+.+++.-|+..||.+||.+..|+-.||++.
T Consensus 405 g-lrv-----~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 405 G-LRV-----HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred c-ccc-----cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 1 111 112222234455555699999999999999999998764
No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=4.3e-19 Score=193.39 Aligned_cols=262 Identities=28% Similarity=0.364 Sum_probs=194.6
Q ss_pred ccccccccccccceEEEEEECCCcEEEEEEecCccc----chHHHHHHHHHhhccccc-ceeeeeeeeccCceeeEEEee
Q 003059 501 KGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQ----GEKQFRMEVATISSTHHL-NLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~----~~~~f~~E~~~l~~l~h~-niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.+.+.||.|+|+.||++... ..+++|.+..... ....|.+|+.++..+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 456678999999999999987 7789999873322 367899999999999988 799999999777778999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCC-ceEEeecccccccCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENY-NAKVSDFGLAKLINP 654 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~ 654 (852)
+.+++|.+++...... ..+.......+..|++.++.|+|+ .+++|||+||+||+++..+ .+++.|||+++.+..
T Consensus 80 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 80 VDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred CCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 9999999777533211 358888999999999999999998 7899999999999999998 799999999986554
Q ss_pred CCCcce---eeeeecCCCCCCChhhhhc---CCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 655 KDHRHR---TLTSVRGTRGYLAPEWLAN---LPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 655 ~~~~~~---~~~~~~gt~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
...... ......|+..|+|||.+.+ .......|+|++|++++++++|..||...... ..............
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~ 231 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELP 231 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcC
Confidence 322221 3456779999999999987 57889999999999999999999997654321 00001111111111
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQM 774 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~ 774 (852)
.. ........ .........+.+++..|+..+|..|.++.+....
T Consensus 232 ~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TP-SLASPLSP-SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred Cc-ccccccCc-cccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 00000000 0001122456677778899999999999887653
No 415
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=99.81 E-value=3.5e-20 Score=167.66 Aligned_cols=110 Identities=30% Similarity=0.530 Sum_probs=83.1
Q ss_pred eccCcccccccccccccccceeeeccCcceeeeeccCCcceEEEeecccCCCcceEEEEEEccCCcEEEEEccCCCCcce
Q 003059 191 FNQGLNSAINSTVNSNLTSPILRLQPVGILSISDVSLNSAAIIAYSSDYAEGSDILRFLSLGSDGNLRIFSSARGSGTKT 270 (852)
Q Consensus 191 w~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~dG~l~~~~w~~~~~~w~ 270 (852)
||+|+|+|.. +++.+++.....+.+.+..++... ++++. ..+.+.++|++||++|++++|.|.+..+.|.
T Consensus 1 wrsG~WnG~~-------f~g~p~~~~~~~~~~~fv~~~~e~--~~t~~-~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~ 70 (110)
T PF00954_consen 1 WRSGPWNGQR-------FSGIPEMSSNSLYNYSFVSNNEEV--YYTYS-LSNSSVLSRLVLDSDGQLQRYIWNESTQSWS 70 (110)
T ss_pred CCccccCCeE-------ECCcccccccceeEEEEEECCCeE--EEEEe-cCCCceEEEEEEeeeeEEEEEEEecCCCcEE
Confidence 8999998873 344455554433333333333322 23222 2245689999999999999999999999999
Q ss_pred eeehhhhccccCCcCcCCCccccCCCCCCCCCCCCccCCCCCceeec
Q 003059 271 RRWAAVADQCEVFGYCGNMGICGYNGYNDSSSDPLCECPSQNFEFID 317 (852)
Q Consensus 271 ~~~~~p~~~C~~~~~CG~~g~C~~~~~~~~~~~~~C~C~~~gf~~~~ 317 (852)
..|.+|.|+||+|+.||+||+|+. +..|.|+|++ ||+|++
T Consensus 71 ~~~~~p~d~Cd~y~~CG~~g~C~~------~~~~~C~Cl~-GF~P~n 110 (110)
T PF00954_consen 71 VFWSAPKDQCDVYGFCGPNGICNS------NNSPKCSCLP-GFEPKN 110 (110)
T ss_pred EEEEecccCCCCccccCCccEeCC------CCCCceECCC-CcCCCc
Confidence 999999999999999999999965 3678999999 999864
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=7.5e-20 Score=184.98 Aligned_cols=174 Identities=11% Similarity=0.086 Sum_probs=135.4
Q ss_pred HHHHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHH----------HHHHHHHhhcccccceeeeeee
Q 003059 493 YKELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQ----------FRMEVATISSTHHLNLVRLVGF 562 (852)
Q Consensus 493 ~~el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~----------f~~E~~~l~~l~h~niv~l~g~ 562 (852)
.+++...+|+..+.||.|+||.||.... ++..+|+|.+.......+. +++|+..+.+++|++|..+.++
T Consensus 25 ~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 25 FDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred HHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 3567788899999999999999999765 5667999999733222222 6899999999999999999888
Q ss_pred eccC--------ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceE
Q 003059 563 SSEG--------KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENIL 634 (852)
Q Consensus 563 ~~~~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIL 634 (852)
+... +..+|||||++|.+|.++.. ++. ....+++.+|..+|+ .+++|||+||+||+
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nil 167 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFI 167 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEE
Confidence 5532 35799999999999988741 221 245699999999998 89999999999999
Q ss_pred eCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHH
Q 003059 635 LDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIV 699 (852)
Q Consensus 635 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ell 699 (852)
+++++ ++|+|||..+....... ...+.....+..++|+|+||+++.-+.
T Consensus 168 i~~~g-i~liDfg~~~~~~e~~a---------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 168 VSKNG-LRIIDLSGKRCTAQRKA---------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EeCCC-EEEEECCCcccccchhh---------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 99988 99999998875532111 011344455678999999999988665
No 417
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2.5e-20 Score=215.99 Aligned_cols=252 Identities=21% Similarity=0.265 Sum_probs=183.0
Q ss_pred cccccccccceEEEEEEC-CCcEEEEEEecC---cccch----HHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 504 KDKLGAGGFGAVYRGVLA-NRTVVAVKQLEG---IEQGE----KQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~---~~~~~----~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.+.+|.|++|.|+..... .....+.|.... ....+ ..+..|+.+-..++|+|++..+..+.+....+-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 467999999988877632 222233332210 11111 2255677778889999999999988888777777999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
+++ +|..++... ..+....+..++.|+..|++|+|+ .+|.|||||++|+++..++.+||+|||.+..+.-.
T Consensus 403 ~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 403 CPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred ccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 999 999999643 247778888999999999999999 89999999999999999999999999999876543
Q ss_pred CC-cceeeeeecCCCCCCChhhhhcCCCCCC-ccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccccc
Q 003059 656 DH-RHRTLTSVRGTRGYLAPEWLANLPITSK-SDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIV 733 (852)
Q Consensus 656 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~k-sDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (852)
.. .........|...|+|||.+.+.+|.++ .||||.|+++..|++|+.||......+.... . . ....-.
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-~------~--~~~~~~ 544 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK-T------N--NYSDQR 544 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh-h------h--cccccc
Confidence 22 1234456789999999999999999875 7999999999999999999976654433210 0 0 000000
Q ss_pred ccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 734 DKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 734 d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...............+...++.++++.+|.+|-++++|++
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0000000111122234567888999999999999999985
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=1.9e-19 Score=180.17 Aligned_cols=138 Identities=17% Similarity=0.151 Sum_probs=107.3
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCccc---c-------hHHH-----------------HHHHHHhhcccccce
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQ---G-------EKQF-----------------RMEVATISSTHHLNL 556 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---~-------~~~f-----------------~~E~~~l~~l~h~ni 556 (852)
.+.||+|+||.||+|...+|+.||||+++.... . ...| ..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 367999999999999988899999999973311 1 1122 349999999988776
Q ss_pred eeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhh-ccccCCCcccCCCCCCceEe
Q 003059 557 VRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYL-HEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 557 v~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~Dlkp~NILl 635 (852)
.....+.. ...+|||||++++++...+.. ...++.....+++.|++.+|.|| |+ .+|+||||||+|||+
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEE
Confidence 44333222 223899999998877654322 23578889999999999999999 56 789999999999999
Q ss_pred CCCCceEEeeccccccc
Q 003059 636 DENYNAKVSDFGLAKLI 652 (852)
Q Consensus 636 ~~~~~~kl~DFGla~~~ 652 (852)
+ ++.++|+|||++...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999999754
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.79 E-value=7e-20 Score=210.45 Aligned_cols=252 Identities=23% Similarity=0.289 Sum_probs=183.3
Q ss_pred cccccccccccccceEEEEEECCCcEEEEEEecCc--ccchHHHHHHHHH--hhcccccceeeeeeeeccCceeeEEEee
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGI--EQGEKQFRMEVAT--ISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~f~~E~~~--l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.+.+.+.||.+.|=.|.+++.+.|. |+||++-+. ....+.|+++++- ...++|||++++.-.-...+.-|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4556789999999999999998887 889988632 2334445444333 4566999999998887778888999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK 655 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 655 (852)
..+ +|.|.|. .++.|..-+..-|+-|++.||..+|. .+|+|||||.+||||..-+-+.|+||...+...-.
T Consensus 103 vkh-nLyDRlS-----TRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 103 VKH-NLYDRLS-----TRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred Hhh-hhhhhhc-----cchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCC
Confidence 855 8888873 34567777888899999999999998 89999999999999999999999999988754433
Q ss_pred CCcceeeeee----cCCCCCCChhhhhc----------CC-CCCCccchhhhHHHHHHHh-CCccccccccccchhhHHH
Q 003059 656 DHRHRTLTSV----RGTRGYLAPEWLAN----------LP-ITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLW 719 (852)
Q Consensus 656 ~~~~~~~~~~----~gt~~y~aPE~~~~----------~~-~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 719 (852)
++......-. +.-..|+|||.+-. .. .+++-||||+||++.||++ |++||+.++--
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~-------- 245 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL-------- 245 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH--------
Confidence 3333333332 23346999998743 12 6788999999999999987 79999755311
Q ss_pred HHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 720 AYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
+++..........+. .+.. ..+..+++.|++.||.+|-++++.++.-.++
T Consensus 246 aYr~~~~~~~e~~Le-~Ied--------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 246 AYRSGNADDPEQLLE-KIED--------VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred hHhccCccCHHHHHH-hCcC--------ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 111110000111111 1110 1355678889999999999999999875554
No 420
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.78 E-value=7.4e-19 Score=194.27 Aligned_cols=218 Identities=24% Similarity=0.417 Sum_probs=163.3
Q ss_pred hhcccccceeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCc-ccC
Q 003059 548 ISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCI-VHC 626 (852)
Q Consensus 548 l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-vH~ 626 (852)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+... ...++|.-...++++|+.||+|||. ..| .|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHN---SPIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhc---Ccceeee
Confidence 45789999999999999999999999999999999999753 3458899999999999999999998 333 999
Q ss_pred CCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcC-------CCCCCccchhhhHHHHHHH
Q 003059 627 DIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANL-------PITSKSDVYSYGMVLLEIV 699 (852)
Q Consensus 627 Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDv~s~Gvvl~ell 699 (852)
.++++|+++|....+||+|||+....... ..........-..-|.|||.++.. ..+.+.||||||++++|++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~-~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEET-AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred eeccccceeeeeEEEEechhhhccccccc-ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 99999999999999999999998876431 011111122234569999999764 1467899999999999999
Q ss_pred hCCccccccccccch-hhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 700 SGRRNFEVSQETNRK-KFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 700 tG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
+.+.||+........ .+... +.+ .....+.+.+.. .. +....++.++..||..+|.+||++++|...++.+
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~----~~~-~~~~~~rP~i~~--~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILR----VKK-GGSNPFRPSIEL--LN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred hccCccccccccCChHHHHHH----HHh-cCCCCcCcchhh--hh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 999999865332221 11111 111 111122222211 01 2233688899999999999999999999998877
Q ss_pred ccC
Q 003059 779 TEI 781 (852)
Q Consensus 779 ~~~ 781 (852)
...
T Consensus 225 ~~~ 227 (484)
T KOG1023|consen 225 NKG 227 (484)
T ss_pred ccc
Confidence 553
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.2e-18 Score=172.24 Aligned_cols=183 Identities=18% Similarity=0.133 Sum_probs=139.4
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCcccch-----HHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEeecC
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGE-----KQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-----~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
...|++|+||+||.+.. ++.+++.+.+.....-. ..|.+|+++|.+++ |+++++++++ ...+++|||++
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 46799999999997655 66778888887444322 25889999999995 5889999886 34699999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCC-CCCceEeCCCCceEEeecccccccCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDI-KPENILLDENYNAKVSDFGLAKLINPKD 656 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NILl~~~~~~kl~DFGla~~~~~~~ 656 (852)
|.+|...+.. ....++.|++++|+++|+ .+|+|||| ||+|||++.++.++|+|||++....+..
T Consensus 82 G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 82 GAAMYQRPPR------------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred CccHHhhhhh------------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9998654310 113477899999999998 89999999 7999999999999999999998655432
Q ss_pred Cc-----ceee-----eeecCCCCCCChhhhhcC-CCC-CCccchhhhHHHHHHHhCCcccc
Q 003059 657 HR-----HRTL-----TSVRGTRGYLAPEWLANL-PIT-SKSDVYSYGMVLLEIVSGRRNFE 706 (852)
Q Consensus 657 ~~-----~~~~-----~~~~gt~~y~aPE~~~~~-~~s-~ksDv~s~Gvvl~elltG~~p~~ 706 (852)
.. .... -....++.|++|+..... ..+ .+.+.++.|.-+|.++|++.+.-
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 10 0000 012368889999876533 333 56688899999999999998764
No 422
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=2.3e-18 Score=173.10 Aligned_cols=140 Identities=16% Similarity=0.112 Sum_probs=109.5
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCcccc---------------------------hHHHHHHHHHhhcccccce
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG---------------------------EKQFRMEVATISSTHHLNL 556 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------------------------~~~f~~E~~~l~~l~h~ni 556 (852)
...||+|+||.||+|...+|+.||||++...... ...++.|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999878999999998743210 1123578999999999987
Q ss_pred eeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC
Q 003059 557 VRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD 636 (852)
Q Consensus 557 v~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~ 636 (852)
.....+... ..+|||||++++++...... ...++......++.|++.+|.++|+. .+|+||||||+|||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE
Confidence 544433332 24899999998865443221 12467788899999999999999973 5899999999999999
Q ss_pred CCCceEEeecccccccC
Q 003059 637 ENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 637 ~~~~~kl~DFGla~~~~ 653 (852)
++.++|+|||++..+.
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 8999999999998764
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=7.6e-18 Score=175.51 Aligned_cols=232 Identities=22% Similarity=0.292 Sum_probs=148.8
Q ss_pred ccccccccccccceEEEEEECC-CcEEEEEEecC----cccchHHHHHHHHHhhccc----------ccceeeeeeeec-
Q 003059 501 KGFKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEG----IEQGEKQFRMEVATISSTH----------HLNLVRLVGFSS- 564 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~----~~~~~~~f~~E~~~l~~l~----------h~niv~l~g~~~- 564 (852)
....+.||.|+++.||.+++.. ++.+|||.+.. .....+++++|...+..+. |-.++.-++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3345689999999999999755 88999998862 2234466777776665533 223333222211
Q ss_pred --------cC---c-----eeeEEEeecCCCCHHHHhh---hcccCCccccchhHHHHHHHhhHhhhhhhccccCCCccc
Q 003059 565 --------EG---K-----HRLLVYEFMKNGSLDNFLF---ANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVH 625 (852)
Q Consensus 565 --------~~---~-----~~~lV~e~~~~gsL~~~l~---~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 625 (852)
.. . ..+++|+-+ .++|.+++. ..... ...+....++.+..|+++.+++||. .+++|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVH 168 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHS---YGLVH 168 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhh---cceEe
Confidence 11 1 336788877 668888764 22221 3456667778888999999999999 89999
Q ss_pred CCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhc--------CCCCCCccchhhhHHHHH
Q 003059 626 CDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLAN--------LPITSKSDVYSYGMVLLE 697 (852)
Q Consensus 626 ~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDv~s~Gvvl~e 697 (852)
+||||+|++++.+|.++|+||+....... .......+..|.+||.... ..++.+.|.|+||+++|.
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~------~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT------RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE------EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc------eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 99999999999999999999988765421 1111345678999997744 257889999999999999
Q ss_pred HHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCC
Q 003059 698 IVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQR 765 (852)
Q Consensus 698 lltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~R 765 (852)
|.+|+.||+....+..... .+..+. +-.+.+..++...++.+|++|
T Consensus 243 lWC~~lPf~~~~~~~~~~~-------------------~f~~C~---~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 243 LWCGRLPFGLSSPEADPEW-------------------DFSRCR---DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHSS-STCCCGGGSTSGG-------------------GGTTSS------HHHHHHHHHHT-SSGGGS
T ss_pred HHHccCCCCCCCccccccc-------------------cchhcC---CcCHHHHHHHHHHccCCcccC
Confidence 9999999986643322110 222333 333344556777899999887
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.70 E-value=7.3e-17 Score=163.01 Aligned_cols=133 Identities=19% Similarity=0.208 Sum_probs=102.3
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecC-cccchHHHHHHHHHhhcc-----cccceeeeeeeeccCc---eee-EEE
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEG-IEQGEKQFRMEVATISST-----HHLNLVRLVGFSSEGK---HRL-LVY 573 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~-~~~~~~~f~~E~~~l~~l-----~h~niv~l~g~~~~~~---~~~-lV~ 573 (852)
.+.||+|+||.||. .-.+.. .+||++.. .....+++.+|+.++..+ .||||++++|++.++. ..+ +|+
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 35799999999996 323333 46888763 233557799999999999 5799999999998763 433 789
Q ss_pred ee--cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhh-hhhccccCCCcccCCCCCCceEeCC----CCceEEeec
Q 003059 574 EF--MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGI-TYLHEECRDCIVHCDIKPENILLDE----NYNAKVSDF 646 (852)
Q Consensus 574 e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~ivH~Dlkp~NILl~~----~~~~kl~DF 646 (852)
|| +++++|.+++... .+++. ..++.+++.++ +|||+ .+|+||||||+|||++. +.+++|+||
T Consensus 85 e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 85 DFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred cCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 99 6689999999432 24444 35677888777 99999 89999999999999974 347999995
Q ss_pred ccc
Q 003059 647 GLA 649 (852)
Q Consensus 647 Gla 649 (852)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 444
No 425
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.69 E-value=2.4e-17 Score=181.83 Aligned_cols=185 Identities=25% Similarity=0.289 Sum_probs=151.3
Q ss_pred cccccccceEEEEE----ECCCcEEEEEEecCcccc---hHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEeecC
Q 003059 506 KLGAGGFGAVYRGV----LANRTVVAVKQLEGIEQG---EKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYEFMK 577 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~----~~~~~~vavK~l~~~~~~---~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~ 577 (852)
.+|+|.||.|++.. .+.+..+|+|.+.+.... ......|..++...+ ||.+|++.-.+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37899999998765 334677888877632211 114556788888887 9999999999999999999999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH 657 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 657 (852)
+|.|...+... ..............++-+++++|+ .+|+|||+|++||+++.+|.+|+.|||+.+..-...
T Consensus 81 gg~lft~l~~~-----~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKE-----VMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK- 151 (612)
T ss_pred cchhhhccccC-----CchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhh-
Confidence 99998877433 235555666677888999999999 899999999999999999999999999998754321
Q ss_pred cceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccc
Q 003059 658 RHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEV 707 (852)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~ 707 (852)
...||..|||||++. ......|-||||++++||+||..||..
T Consensus 152 ------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 152 ------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 117899999999998 567889999999999999999999974
No 426
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=6.6e-17 Score=190.71 Aligned_cols=198 Identities=20% Similarity=0.256 Sum_probs=159.2
Q ss_pred HHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhccc---ccceeeeeeeeccCceeeE
Q 003059 495 ELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTH---HLNLVRLVGFSSEGKHRLL 571 (852)
Q Consensus 495 el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~---h~niv~l~g~~~~~~~~~l 571 (852)
++....+.+.+.||+|+||.||+|...+++.||+|.-+... ..+|---.+++.||+ -+-|..+...+.-.+.-+|
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~--~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN--PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC--ceeeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 45555667778999999999999998889999999876322 123333334455555 2334445555556778899
Q ss_pred EEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC-------CCCceEEe
Q 003059 572 VYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD-------ENYNAKVS 644 (852)
Q Consensus 572 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~-------~~~~~kl~ 644 (852)
|+||.+.|+|.+++. ..+..+|.....++.|+++.+++||. .+|||+||||+|+||. +..-++|+
T Consensus 772 v~ey~~~Gtlld~~N-----~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLIN-----TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred eeeccccccHHHhhc-----cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEE
Confidence 999999999999996 34568999999999999999999999 8999999999999994 34458999
Q ss_pred ecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCc
Q 003059 645 DFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRR 703 (852)
Q Consensus 645 DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~ 703 (852)
|||-+..+....+. ......++|-.+-.+|...+.+++...|.|.|+.+++-||.|+.
T Consensus 844 DfG~siDm~lfp~~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDG-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ecccceeeeEcCCC-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999776543232 45667889999999999999999999999999999999999975
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=1.5e-16 Score=163.10 Aligned_cols=133 Identities=18% Similarity=0.280 Sum_probs=111.9
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCccc---------chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQ---------GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---------~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
+.||+|++|.||+|.. .+..+++|+...... ....+.+|++++..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 556688897652211 124578899999999999988877777777888999999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
+++++|.+++... .+ .+..++.+++.+|.++|+ .+++|||++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988432 11 778899999999999998 8999999999999999 78999999998875
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=1.8e-16 Score=164.26 Aligned_cols=140 Identities=15% Similarity=0.158 Sum_probs=109.3
Q ss_pred ccccccccccccceEEEEE--ECCCcEEEEEEecCccc-------------------------chHHHHHHHHHhhcccc
Q 003059 501 KGFKDKLGAGGFGAVYRGV--LANRTVVAVKQLEGIEQ-------------------------GEKQFRMEVATISSTHH 553 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~l~~~~~-------------------------~~~~f~~E~~~l~~l~h 553 (852)
+.+.+.||+|+||.||+|. ..+++.||+|.+..... ....++.|+.++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5567899999999999998 56789999999873211 01235689999999976
Q ss_pred c--ceeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCC-cccCCCCC
Q 003059 554 L--NLVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDC-IVHCDIKP 630 (852)
Q Consensus 554 ~--niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlkp 630 (852)
. .+.+++++ ...++||||+++.+|..++... ..+.......++.||+.+|.+||+ .+ |+||||||
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp 177 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSE 177 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCCh
Confidence 3 34445543 2358999999998887654221 234555678899999999999999 78 99999999
Q ss_pred CceEeCCCCceEEeecccccccC
Q 003059 631 ENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 631 ~NILl~~~~~~kl~DFGla~~~~ 653 (852)
+||+++ +++++|+|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999988553
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=4.6e-16 Score=157.65 Aligned_cols=135 Identities=16% Similarity=0.178 Sum_probs=108.0
Q ss_pred ccccccccccccceEEEEEECCCcEEEEEEecCccc-----------------------chHHHHHHHHHhhccccc--c
Q 003059 501 KGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQ-----------------------GEKQFRMEVATISSTHHL--N 555 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----------------------~~~~f~~E~~~l~~l~h~--n 555 (852)
+.+.+.||+|+||.||++...+++.||||++..... ....+..|+.++..+.|+ .
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 666789999999999999988899999998753211 112356788899999887 4
Q ss_pred eeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe
Q 003059 556 LVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 556 iv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl 635 (852)
+...++. ...++||||+++++|...... .....++.+++.++.++|+ .+|+||||||+||++
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill 158 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILV 158 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEE
Confidence 4555543 345899999999998765420 2345788999999999999 899999999999999
Q ss_pred CCCCceEEeecccccccC
Q 003059 636 DENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 636 ~~~~~~kl~DFGla~~~~ 653 (852)
++++.++|+|||++....
T Consensus 159 ~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCcEEEEECCccccCC
Confidence 999999999999997553
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=7.5e-16 Score=179.78 Aligned_cols=134 Identities=19% Similarity=0.267 Sum_probs=110.1
Q ss_pred cccccccccccceEEEEEECCCcEEEEEEecCc-c-------cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEE
Q 003059 502 GFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGI-E-------QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 502 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~-~-------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 573 (852)
...+.||+|+||.||+|.+.+...++.+++... . ...+.+.+|++++.+++|++++....++......++||
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred CccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 346789999999999998766554333333211 1 12356889999999999999998888887777889999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
||+++++|.+++. ....++.+++++|.|||+ .+++||||||+|||+ +++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999883 346789999999999999 899999999999999 6789999999999854
No 431
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.63 E-value=8.8e-16 Score=155.78 Aligned_cols=129 Identities=19% Similarity=0.293 Sum_probs=105.3
Q ss_pred cccccccceEEEEEECCCcEEEEEEecCcc--c-------chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeec
Q 003059 506 KLGAGGFGAVYRGVLANRTVVAVKQLEGIE--Q-------GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~-------~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 576 (852)
.||+|+||.||+|.+ ++..|++|...... . ...++.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 45678999865211 1 1255778999999999887665555556666789999999
Q ss_pred CCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 577 KNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 577 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
++++|.+++.... . .++.+++.+|.+||+ .+++|||++|.||+++ ++.+++.|||++..
T Consensus 80 ~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN------D------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH------H------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999874321 0 789999999999998 8999999999999999 89999999999875
No 432
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.63 E-value=1.3e-15 Score=158.03 Aligned_cols=200 Identities=23% Similarity=0.308 Sum_probs=134.4
Q ss_pred ccccceeeeeeeecc---------------------------CceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHH
Q 003059 551 THHLNLVRLVGFSSE---------------------------GKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFN 603 (852)
Q Consensus 551 l~h~niv~l~g~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~ 603 (852)
-+|||||++.++|.+ ....|+||...+ .+|.+|+..+. .+.....-
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~------~s~r~~~~ 345 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH------RSYRTGRV 345 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC------CchHHHHH
Confidence 478999888876532 346789999884 59999997443 55666777
Q ss_pred HHHhhHhhhhhhccccCCCcccCCCCCCceEe--CCCC--ceEEeecccccccCCCC---CcceeeeeecCCCCCCChhh
Q 003059 604 IALGTARGITYLHEECRDCIVHCDIKPENILL--DENY--NAKVSDFGLAKLINPKD---HRHRTLTSVRGTRGYLAPEW 676 (852)
Q Consensus 604 i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl--~~~~--~~kl~DFGla~~~~~~~---~~~~~~~~~~gt~~y~aPE~ 676 (852)
|+.|+++|+.|||. ++|.|||+|++|||| |+|+ ...|+|||.+-.-.... ......-..-|...-||||+
T Consensus 346 ~laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi 422 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEI 422 (598)
T ss_pred HHHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhh
Confidence 89999999999998 899999999999998 4443 46889999874321100 11111122346778999999
Q ss_pred hhcCC------CCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHH
Q 003059 677 LANLP------ITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRA 750 (852)
Q Consensus 677 ~~~~~------~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 750 (852)
....+ --.|+|.|+.|.+.||+++...||....+. ...... +.+..+.. +. ......+
T Consensus 423 ~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~-----Yqe~qLPa-----lp-----~~vpp~~ 486 (598)
T KOG4158|consen 423 ATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT-----YQESQLPA-----LP-----SRVPPVA 486 (598)
T ss_pred hhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh-----hhhhhCCC-----Cc-----ccCChHH
Confidence 86443 125899999999999999999999752211 001000 11111111 11 1111234
Q ss_pred HHHHHhccccCCCCCCCHHHHHHHHh
Q 003059 751 IQVSFWCIQEQPSQRPMMGKVVQMLE 776 (852)
Q Consensus 751 ~~l~~~cl~~dp~~RPt~~ev~~~L~ 776 (852)
.+++...++.||.+|++..-....|.
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHHH
Confidence 56677789999999999876665553
No 433
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=2e-16 Score=171.44 Aligned_cols=176 Identities=20% Similarity=0.359 Sum_probs=129.9
Q ss_pred eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecc
Q 003059 568 HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFG 647 (852)
Q Consensus 568 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 647 (852)
+.|+.|++|.-.+|.+||.+... ....++...++++.|++.+++| ++.+|+|+||.||+...+..+||.|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 57899999999999999975543 4567888999999999999999 479999999999999999999999999
Q ss_pred cccccCCCC---CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHh-CCccccccccccchhhHHHHHHH
Q 003059 648 LAKLINPKD---HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVS-GRRNFEVSQETNRKKFSLWAYEE 723 (852)
Q Consensus 648 la~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 723 (852)
+........ ......+...||..||+||.+.+..|+.|+|||+||++|+||+. =..+++.. -+...
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----------~t~~d 471 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----------ATLTD 471 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----------Hhhhh
Confidence 998765432 11223456779999999999999999999999999999999997 33333211 01111
Q ss_pred HhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 003059 724 FEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKV 771 (852)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev 771 (852)
++++.+. +.. ......-..+..+++.+.|.+||++.++
T Consensus 472 ~r~g~ip----~~~------~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 472 IRDGIIP----PEF------LQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhcCCCC----hHH------hhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 2222111 111 1111123456778999999999944443
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=1.8e-14 Score=138.64 Aligned_cols=135 Identities=21% Similarity=0.195 Sum_probs=114.7
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccc--cceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHH--LNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
.+.||+|.++.||++...+ ..+++|....... ...+..|+..+..++| .++++++++....+..+++|||++++.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 3679999999999999865 6799999875433 5679999999999987 5899999998888899999999988776
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
..+ +......++.+++++|++||.....+++|+|++|+||++++.+.+++.|||.++..
T Consensus 81 ~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 543 45566778999999999999855457999999999999999999999999988743
No 435
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.54 E-value=1.3e-14 Score=145.57 Aligned_cols=137 Identities=20% Similarity=0.198 Sum_probs=97.3
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCcccch---HH----------------------HHHHHHHhhcccccc--e
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGE---KQ----------------------FRMEVATISSTHHLN--L 556 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~---~~----------------------f~~E~~~l~~l~h~n--i 556 (852)
.+.||+|+||.||+|...+++.||||++....... .. ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998888999999886432111 11 134555555554432 3
Q ss_pred eeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeC
Q 003059 557 VRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLD 636 (852)
Q Consensus 557 v~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~ 636 (852)
.+.+++ ...++||||++++.+......... .. .....++.+++.++.++|.+ .+|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE
Confidence 444443 245899999999544321111100 11 56678999999999999973 6899999999999999
Q ss_pred CCCceEEeecccccccC
Q 003059 637 ENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 637 ~~~~~kl~DFGla~~~~ 653 (852)
++.++|+|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 9999999999997543
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.50 E-value=1.2e-13 Score=143.54 Aligned_cols=133 Identities=17% Similarity=0.154 Sum_probs=103.2
Q ss_pred cccc-ccccceEEEEEECCCcEEEEEEecCc--------------ccchHHHHHHHHHhhcccccce--eeeeeeeccCc
Q 003059 505 DKLG-AGGFGAVYRGVLANRTVVAVKQLEGI--------------EQGEKQFRMEVATISSTHHLNL--VRLVGFSSEGK 567 (852)
Q Consensus 505 ~~lG-~G~fg~Vy~~~~~~~~~vavK~l~~~--------------~~~~~~f~~E~~~l~~l~h~ni--v~l~g~~~~~~ 567 (852)
..|| .||.|+||++... +..++||++... ......+.+|++++.+++|++| ++.+++...+.
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4687 8999999999875 556888877421 1223567889999999998875 67777644322
Q ss_pred ----eeeEEEeecCC-CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceE
Q 003059 568 ----HRLLVYEFMKN-GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAK 642 (852)
Q Consensus 568 ----~~~lV~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 642 (852)
..++||||+++ .+|.+++... .++.. .+.+|+.+|.+||+ .+|+||||||.|||++.++.++
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEE
Confidence 23599999997 6999887431 23332 36789999999999 8999999999999999999999
Q ss_pred Eeecccccc
Q 003059 643 VSDFGLAKL 651 (852)
Q Consensus 643 l~DFGla~~ 651 (852)
|+|||.++.
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999998875
No 437
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=2.4e-14 Score=166.37 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=182.4
Q ss_pred cccccccccccccceEEEEEEC--CCcEEEEEEecCcccch---HHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVLA--NRTVVAVKQLEGIEQGE---KQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~~~---~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~ 573 (852)
.+.+.+.||+|.|+.|-..... ....+|+|.+....... .....|..+=..+. |.|++.+++...+.+..+++.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4566777999999999888753 34456777665333222 23334676666665 999999999999999999999
Q ss_pred eecCCCCHHHHhh-hcccCCccccchhHHHHHHHhhHhhhhhhc-cccCCCcccCCCCCCceEeCCCC-ceEEeeccccc
Q 003059 574 EFMKNGSLDNFLF-ANEEGSGKLLNWQSRFNIALGTARGITYLH-EECRDCIVHCDIKPENILLDENY-NAKVSDFGLAK 650 (852)
Q Consensus 574 e~~~~gsL~~~l~-~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~ 650 (852)
||..++++.+.+. .. ....+....-....|+..++.|+| + .++.|+||||+|.+++..+ ..+++|||+|.
T Consensus 101 ~~s~g~~~f~~i~~~~----~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPD----STGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred CcccccccccccccCC----ccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhc
Confidence 9999999988873 22 113444556678899999999999 6 8899999999999999999 99999999999
Q ss_pred ccCCCCCcceeeeeecC-CCCCCChhhhhcC-CCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCC
Q 003059 651 LINPKDHRHRTLTSVRG-TRGYLAPEWLANL-PITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGN 728 (852)
Q Consensus 651 ~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (852)
.+..............| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++.......... .| .+..
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~-~~-----~~~~ 247 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS-SW-----KSNK 247 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce-ee-----cccc
Confidence 87763344455556678 9999999999874 446789999999999999999999987654432211 11 1110
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 729 VKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
...... .-..-.....++...++..+|..|.+.+++..
T Consensus 248 --~~~~~~-----~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 --GRFTQL-----PWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred --cccccC-----ccccCChhhhhcccccccCCchhccccccccc
Confidence 000000 00001123344555577789999988777653
No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.41 E-value=9.7e-14 Score=160.64 Aligned_cols=164 Identities=26% Similarity=0.309 Sum_probs=114.2
Q ss_pred ccccccccccceEEEEEECC-CcEEEEEEecCcccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCH
Q 003059 503 FKDKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
-.+.|-.|++|.||...++. .+..|+|+-+... +.+- ++.....|.+| |+-
T Consensus 87 ~IklisngAygavylvrh~~trqrfa~kiNkq~l-----ilRn--ilt~a~npfvv---------------------gDc 138 (1205)
T KOG0606|consen 87 TIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----ILRN--ILTFAGNPFVV---------------------GDC 138 (1205)
T ss_pred eeEeeccCCCCceeeeeccccccchhhcccccch-----hhhc--cccccCCccee---------------------chh
Confidence 35679999999999998654 5567774322111 0000 22222233222 333
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCC------
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPK------ 655 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~------ 655 (852)
.+.+..- ..++. +++.+++|||. .+|+|||+||+|.||..-|++|+.|||+.+.....
T Consensus 139 ~tllk~~-----g~lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 139 ATLLKNI-----GPLPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred hhhcccC-----CCCcc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 3333211 12322 23788999999 89999999999999999999999999998753210
Q ss_pred ------CCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccccccc
Q 003059 656 ------DHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQE 710 (852)
Q Consensus 656 ------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~ 710 (852)
+...-....+.||+.|+|||++....|...+|.|++|+++||.+-|..||.....
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp 263 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 263 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence 0111112346799999999999999999999999999999999999999986644
No 439
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs
Probab=99.41 E-value=2.4e-13 Score=110.08 Aligned_cols=64 Identities=30% Similarity=0.518 Sum_probs=53.5
Q ss_pred CCCCCceeecccccccCCcccccccccccChhhHHhhhccCCcEEEEEecc-CCccceEeccCCCcc
Q 003059 334 CPGSATMLELPHTKFLTFQPELSSQVFFVGISACRLNCLVTGSCVASTSLS-DGTGLCYLKTPDFVS 399 (852)
Q Consensus 334 C~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~-~~~~~C~~~~~~~~~ 399 (852)
|+.+++|++|+++++|++.... ...++++++|++.||+||||+||+|.. .++++|++|.++|.|
T Consensus 1 C~~~d~F~~l~~~~~p~~~~~~--~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d 65 (66)
T PF08276_consen 1 CGSGDGFLKLPNMKLPDFDNAI--VDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVD 65 (66)
T ss_pred CcCCCEEEEECCeeCCCCccee--eecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeec
Confidence 4567899999999999986543 235689999999999999999999973 266899999998875
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=5.3e-12 Score=142.56 Aligned_cols=139 Identities=25% Similarity=0.256 Sum_probs=99.6
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccc-----------------------------------------hHHHHH
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG-----------------------------------------EKQFRM 543 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-----------------------------------------~~~f~~ 543 (852)
+.||.|++|.||+|++.+|+.||||+.+..... +-+|..
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 359999999999999999999999998632100 012455
Q ss_pred HHHHhhccc----ccceeeeeeeec-cCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHh-hhhhhcc
Q 003059 544 EVATISSTH----HLNLVRLVGFSS-EGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTAR-GITYLHE 617 (852)
Q Consensus 544 E~~~l~~l~----h~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~L~yLH~ 617 (852)
|+..+.+++ |.+-+.+-..+. .....+|||||++|++|.+++..... .. .+.+++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHHHHHHHh
Confidence 666555553 333333333332 24467999999999999887643211 11 23456666666 4677887
Q ss_pred ccCCCcccCCCCCCceEeCCCCceEEeecccccccC
Q 003059 618 ECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 618 ~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
.+++|+|+||.||+++++++++|.|||++..+.
T Consensus 276 ---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 ---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 899999999999999999999999999998664
No 441
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=5.8e-12 Score=128.47 Aligned_cols=156 Identities=23% Similarity=0.331 Sum_probs=118.4
Q ss_pred HHHhhcccccceeeeeeeeccCc-----eeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhcccc
Q 003059 545 VATISSTHHLNLVRLVGFSSEGK-----HRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEEC 619 (852)
Q Consensus 545 ~~~l~~l~h~niv~l~g~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~ 619 (852)
...|-.+-|.|||+++.|+.+.+ +..++.|||..|+|..+|.+..+ ....+......+++.||..||.|||+.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~-~~~a~~~~~wkkw~tqIlsal~yLhs~- 195 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK-NQKALFQKAWKKWCTQILSALSYLHSC- 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH-hhhhhhHHHHHHHHHHHHhhhhhhhcc-
Confidence 33455667999999999976543 57899999999999999976554 355677778889999999999999985
Q ss_pred CCCcccCCCCCCceEeCCCCceEEeecccccccCCCC--CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHH
Q 003059 620 RDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKD--HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLE 697 (852)
Q Consensus 620 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~e 697 (852)
.+.|+|+++.-+.|++..++-+|+.--.-. ...... ..........+-++|.|||+=.....+..+|||+||+..+|
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 478999999999999999998888532111 111000 00011122346789999998777778889999999999999
Q ss_pred HHhCCc
Q 003059 698 IVSGRR 703 (852)
Q Consensus 698 lltG~~ 703 (852)
|.-+..
T Consensus 275 mailEi 280 (458)
T KOG1266|consen 275 MAILEI 280 (458)
T ss_pred HHHhee
Confidence 988764
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=2.6e-11 Score=119.48 Aligned_cols=130 Identities=20% Similarity=0.139 Sum_probs=97.2
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhccccccee-eeeeeeccCceeeEEEeecCCCCHHH
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLV-RLVGFSSEGKHRLLVYEFMKNGSLDN 583 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lV~e~~~~gsL~~ 583 (852)
+.|+.|.++.||++... ++.+++|...........++.|++++..+.+.+++ +++.+.. ...++||||+++.++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcccc
Confidence 56899999999999875 56799998764433345678899999998766554 4555433 34589999999988754
Q ss_pred HhhhcccCCccccchhHHHHHHHhhHhhhhhhcccc--CCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 584 FLFANEEGSGKLLNWQSRFNIALGTARGITYLHEEC--RDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 584 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
.. . ....++.+++++|+.||... +..++|+|++|.||+++ ++.++++||+.+..
T Consensus 81 ~~----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 ED----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 20 0 11245678999999999832 22369999999999999 67899999998764
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=4.8e-11 Score=132.63 Aligned_cols=253 Identities=23% Similarity=0.245 Sum_probs=176.0
Q ss_pred HHHHhcccccccccc--cccceEEEEEE---CCCcEEEEEEecC---cccchHHHHHHHHHhhcc-cccceeeeeeeecc
Q 003059 495 ELQRSTKGFKDKLGA--GGFGAVYRGVL---ANRTVVAVKQLEG---IEQGEKQFRMEVATISST-HHLNLVRLVGFSSE 565 (852)
Q Consensus 495 el~~~~~~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~l~~---~~~~~~~f~~E~~~l~~l-~h~niv~l~g~~~~ 565 (852)
+....+..+.+.+|. |.+|.||.+.. .+...+|+|+-+. .......=.+|+..-+++ .|+|.++....+..
T Consensus 110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc
Confidence 445556677889999 99999999986 3467788887441 122223335677776777 49999998888999
Q ss_pred CceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHh----hhhhhccccCCCcccCCCCCCceEeCCC-Cc
Q 003059 566 GKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTAR----GITYLHEECRDCIVHCDIKPENILLDEN-YN 640 (852)
Q Consensus 566 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~ivH~Dlkp~NILl~~~-~~ 640 (852)
++..++-.|++ +.+|..+.+.... .++....+....+..+ ||.++|. ..++|-|+||.||++..+ ..
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~~----~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPCN----FLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcccc----cCCchhhhhHHhhhhhcccccccccCC---Ccccccccchhheecccccce
Confidence 99999999998 5788888865433 3444555556666666 9999999 899999999999999998 88
Q ss_pred eEEeecccccccCCCCCcceee--eeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHH
Q 003059 641 AKVSDFGLAKLINPKDHRHRTL--TSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSL 718 (852)
Q Consensus 641 ~kl~DFGla~~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~ 718 (852)
.++.|||+...+.......... ....|...|++||...+ .++..+|||++|.++.|..++..+.... +...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g------~~~~ 334 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVG------KNSS 334 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCC------CCCC
Confidence 9999999999887654222221 22357888999998765 5688999999999999999987654321 0001
Q ss_pred HHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 003059 719 WAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQ 773 (852)
Q Consensus 719 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~ 773 (852)
| ..++... +-+..+.+ ...++..+...+++.+|..|++.+.+..
T Consensus 335 W--~~~r~~~---ip~e~~~~------~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 335 W--SQLRQGY---IPLEFCEG------GSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred c--ccccccc---CchhhhcC------cchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1 1111111 11111111 0112222566689999999998776653
No 444
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.
Probab=99.16 E-value=3.4e-11 Score=103.57 Aligned_cols=77 Identities=25% Similarity=0.397 Sum_probs=62.3
Q ss_pred CCCCC---CceeecccccccCCcccccccccccChhhHHhhhccCCcEEEEEeccCCccceEeccCCCccCCcCCCCCCc
Q 003059 333 SCPGS---ATMLELPHTKFLTFQPELSSQVFFVGISACRLNCLVTGSCVASTSLSDGTGLCYLKTPDFVSGFQNPALPST 409 (852)
Q Consensus 333 ~C~~~---~~f~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~ 409 (852)
.|... ++|++++++++|+.... . ..+++++|++.|++||+|+||+|. +++++|++|..++.+++.......+
T Consensus 4 ~C~~~~~~~~f~~~~~~~~~~~~~~---~-~~~s~~~C~~~Cl~nCsC~a~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~ 78 (84)
T cd01098 4 NCGGDGSTDGFLKLPDVKLPDNASA---I-TAISLEECREACLSNCSCTAYAYN-NGSGGCLLWNGLLNNLRSLSSGGGT 78 (84)
T ss_pred ccCCCCCCCEEEEeCCeeCCCchhh---h-ccCCHHHHHHHHhcCCCcceeeec-CCCCeEEEEeceecceEeecCCCcE
Confidence 57544 68999999999987543 2 667999999999999999999997 4467999999998877654444578
Q ss_pred cceec
Q 003059 410 SYVKV 414 (852)
Q Consensus 410 ~~~kv 414 (852)
+|+|+
T Consensus 79 ~yiKv 83 (84)
T cd01098 79 LYLRL 83 (84)
T ss_pred EEEEe
Confidence 89987
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.13 E-value=6.1e-11 Score=135.37 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=92.8
Q ss_pred ccccccccceEEEEEECC-CcEEEEEEecCcccc-----------------------------------------hHHHH
Q 003059 505 DKLGAGGFGAVYRGVLAN-RTVVAVKQLEGIEQG-----------------------------------------EKQFR 542 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~-----------------------------------------~~~f~ 542 (852)
+-||.|++|.||+|++++ |+.||||+.+..... +-+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 469999999999999987 999999998632100 01244
Q ss_pred HHHHHhhccc----ccceeeeeeeecc-CceeeEEEeecCCCCHHHHhhhcccC-CccccchhHHHHHHHhhHhhhhhhc
Q 003059 543 MEVATISSTH----HLNLVRLVGFSSE-GKHRLLVYEFMKNGSLDNFLFANEEG-SGKLLNWQSRFNIALGTARGITYLH 616 (852)
Q Consensus 543 ~E~~~l~~l~----h~niv~l~g~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH 616 (852)
+|+..+.+++ +.+.+.+-..+.+ ....+|||||++|+.|.++-.-...+ ..+.+.......++.|+.
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif------- 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF------- 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------
Confidence 5555555543 4444444443333 45678999999999998753211110 111233333333344443
Q ss_pred cccCCCcccCCCCCCceEeCCCC----ceEEeecccccccCC
Q 003059 617 EECRDCIVHCDIKPENILLDENY----NAKVSDFGLAKLINP 654 (852)
Q Consensus 617 ~~~~~~ivH~Dlkp~NILl~~~~----~~kl~DFGla~~~~~ 654 (852)
. .+++|+|+||.||+++.++ ++++.|||++..+.+
T Consensus 278 ~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 2 6899999999999999988 999999999987643
No 446
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins. Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=99.11 E-value=6.3e-11 Score=99.03 Aligned_cols=71 Identities=17% Similarity=0.090 Sum_probs=59.8
Q ss_pred CCCCCceeecccccccCCcccccccccccChhhHHhhhcc---CCcEEEEEeccCCccceEeccCCC-ccCCcCCCCCCc
Q 003059 334 CPGSATMLELPHTKFLTFQPELSSQVFFVGISACRLNCLV---TGSCVASTSLSDGTGLCYLKTPDF-VSGFQNPALPST 409 (852)
Q Consensus 334 C~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~---nCsC~a~~~~~~~~~~C~~~~~~~-~~~~~~~~~~~~ 409 (852)
|..++.|+++.++++|++.. ++++||+++|++ ||||+||+|... +.+|++|.+++ .+.+.....+.+
T Consensus 5 ~~~~g~fl~~~~~klpd~~~--------~s~~eC~~~Cl~~~~nCsC~Aya~~~~-~~gC~~W~~~l~~d~~~~~~~g~~ 75 (80)
T cd00129 5 CKSAGTTLIKIALKIKTTKA--------NTADECANRCEKNGLPFSCKAFVFAKA-RKQCLWFPFNSMSGVRKEFSHGFD 75 (80)
T ss_pred eecCCeEEEeecccCCcccc--------cCHHHHHHHHhcCCCCCCceeeeccCC-CCCeEEecCcchhhHHhccCCCce
Confidence 55677899999999987643 689999999999 999999999643 35899999999 888877767788
Q ss_pred ccee
Q 003059 410 SYVK 413 (852)
Q Consensus 410 ~~~k 413 (852)
+|+|
T Consensus 76 Ly~r 79 (80)
T cd00129 76 LYEN 79 (80)
T ss_pred eEeE
Confidence 9987
No 447
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.06 E-value=6.5e-10 Score=114.57 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=108.7
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCccc--chHHHHHHHHHhhcccc--cceeeeeeeeccCc---eeeEEEeecC
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQ--GEKQFRMEVATISSTHH--LNLVRLVGFSSEGK---HRLLVYEFMK 577 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~f~~E~~~l~~l~h--~niv~l~g~~~~~~---~~~lV~e~~~ 577 (852)
+.|+.|..+.||++...+++.+++|....... ...++..|++++..+++ .++.+++.+..+.. ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999987767899998764332 45678999999999976 44677888776643 6789999999
Q ss_pred CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhcccc--------------------------------------
Q 003059 578 NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEEC-------------------------------------- 619 (852)
Q Consensus 578 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------- 619 (852)
+.++.+.+.. ..++...+..++.++++.|.+||+..
T Consensus 84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9888765421 23566667777778888888777421
Q ss_pred ---------------CCCcccCCCCCCceEeCC--CCceEEeecccccc
Q 003059 620 ---------------RDCIVHCDIKPENILLDE--NYNAKVSDFGLAKL 651 (852)
Q Consensus 620 ---------------~~~ivH~Dlkp~NILl~~--~~~~kl~DFGla~~ 651 (852)
+..++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998764
No 448
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.03 E-value=2.4e-09 Score=120.08 Aligned_cols=166 Identities=16% Similarity=0.191 Sum_probs=123.2
Q ss_pred ECCCcEEEEEEecCccc-chHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccch
Q 003059 520 LANRTVVAVKQLEGIEQ-GEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNW 598 (852)
Q Consensus 520 ~~~~~~vavK~l~~~~~-~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~ 598 (852)
..++.+|.|...+.... ......+.++.|+.++||||+++++...+.+..|||+|.+. -|..++.. +..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--------l~~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--------LGK 103 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------hHH
Confidence 45677888888773332 23456788899999999999999999999999999999873 46666632 224
Q ss_pred hHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhh
Q 003059 599 QSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLA 678 (852)
Q Consensus 599 ~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 678 (852)
....-.+.||+.||.|||+. .+++|++|..+-|+|++.|+.||++|.++........ .......-..|..|+.+.
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---PAKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---ccccchhhhcccChhhcC
Confidence 44555788999999999974 6799999999999999999999999998865432111 111112223466676543
Q ss_pred cCCCCCCccchhhhHHHHHHHhCC
Q 003059 679 NLPITSKSDVYSYGMVLLEIVSGR 702 (852)
Q Consensus 679 ~~~~s~ksDv~s~Gvvl~elltG~ 702 (852)
... -..|.|.||++++|++.|.
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCcc
Confidence 222 3469999999999999993
No 449
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.00 E-value=2.9e-09 Score=105.77 Aligned_cols=136 Identities=18% Similarity=0.152 Sum_probs=97.5
Q ss_pred ccccccccceEEEEEECC-------CcEEEEEEecCcc-----------------------cchHHHH----HHHHHhhc
Q 003059 505 DKLGAGGFGAVYRGVLAN-------RTVVAVKQLEGIE-----------------------QGEKQFR----MEVATISS 550 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~-----------------------~~~~~f~----~E~~~l~~ 550 (852)
-.||.|--+.||.|...+ +..+|||+.+... ...+.+. +|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999998543 4789999774210 0012233 79999988
Q ss_pred ccc--cceeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhh-ccccCCCcccCC
Q 003059 551 THH--LNLVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYL-HEECRDCIVHCD 627 (852)
Q Consensus 551 l~h--~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~D 627 (852)
+.. -++.+++++ ...+|||||+.+..+..-..+ ...++......+..+++.+|..| |+ .+|||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence 853 466677765 467899999976544221111 11244455667889999999999 76 7999999
Q ss_pred CCCCceEeCCCCceEEeecccccccC
Q 003059 628 IKPENILLDENYNAKVSDFGLAKLIN 653 (852)
Q Consensus 628 lkp~NILl~~~~~~kl~DFGla~~~~ 653 (852)
|++.|||++ ++.+.|+|||.+....
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999997 4689999999887653
No 450
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=6.3e-10 Score=123.83 Aligned_cols=245 Identities=22% Similarity=0.237 Sum_probs=167.4
Q ss_pred cccccccccccccceEEEEEE--CCCcEEEEEEecCcccc-hHH--HHHHHHHhhcc-cccceeeeeeeeccCceeeEEE
Q 003059 500 TKGFKDKLGAGGFGAVYRGVL--ANRTVVAVKQLEGIEQG-EKQ--FRMEVATISST-HHLNLVRLVGFSSEGKHRLLVY 573 (852)
Q Consensus 500 ~~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~-~~~--f~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~ 573 (852)
+..+..+||.|.|+.|++... .++..+++|.+...... ..+ -..|+.+...+ .|.++++....+....+.|+=-
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 345567899999999999874 35778999987633221 111 24566666555 5888999888888888888999
Q ss_pred eecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC-CceEEeeccccccc
Q 003059 574 EFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN-YNAKVSDFGLAKLI 652 (852)
Q Consensus 574 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla~~~ 652 (852)
||++++++...+. ....++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..++.|||.+..+
T Consensus 346 e~~~~~s~~l~~~-----~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 346 EFCEGGSSSLRSV-----TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred hhhcCcchhhhhH-----HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccccccc
Confidence 9999999887762 13347778889999999999999998 899999999999999886 88899999998642
Q ss_pred CCCCCcceeeeeecCCCCC-CChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCccc
Q 003059 653 NPKDHRHRTLTSVRGTRGY-LAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKG 731 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (852)
.- ........+..| .+++......+-.+.|+++||..+.|.+++..--..... |. .+..
T Consensus 418 ~~-----~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~--------~~-------~i~~ 477 (524)
T KOG0601|consen 418 AF-----SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ--------SL-------TIRS 477 (524)
T ss_pred ce-----ecccccccccccccchhhccccccccccccccccccccccccCcccCccccc--------ce-------eeec
Confidence 11 011111223334 356666677888999999999999999998753221100 00 0111
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHHhcC
Q 003059 732 IVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMGKVVQMLEGI 778 (852)
Q Consensus 732 ~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ev~~~L~~~ 778 (852)
-.-+.+.+ ...+. ..++...+..++..||.+.++....+-.
T Consensus 478 ~~~p~~~~---~~~~~---q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 478 GDTPNLPG---LKLQL---QVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ccccCCCc---hHHhh---hhhhhhhcCCccccchhhhhhcccchhh
Confidence 11111111 11222 2333347889999999988876655433
No 451
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=7.2e-09 Score=99.19 Aligned_cols=130 Identities=21% Similarity=0.278 Sum_probs=99.6
Q ss_pred ccccccccceEEEEEECCCcEEEEEEec-Ccc--------cchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLE-GIE--------QGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~-~~~--------~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
..+.+|+-+.+|.+.+.+.. +++|.-. +.- -....-.+|+.++.+++--.|.--.=+..+.....|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999775544 5555432 211 1123456899999998766665555566677788899999
Q ss_pred cCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 576 MKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 576 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
.++..|.+++... +..++..+-.-+.-||. .+|+|+||.++||++..+. +.++||||+..
T Consensus 81 I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999988532 24577888888889998 8999999999999998775 99999999974
No 452
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.89 E-value=1.1e-08 Score=97.23 Aligned_cols=143 Identities=19% Similarity=0.262 Sum_probs=103.3
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCc--------ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEee
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGI--------EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEF 575 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--------~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 575 (852)
.+.|-+|+-+.|+++.+.+.+.+.-+++.+. .-..++.++|+..|.+++--.|.--.-++.+...-.|+|||
T Consensus 12 l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred ceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 4578899999999998866553433344321 12345678899999988766655555556666677899999
Q ss_pred cCC-CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc---eEEeecccccc
Q 003059 576 MKN-GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN---AKVSDFGLAKL 651 (852)
Q Consensus 576 ~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DFGla~~ 651 (852)
+++ .++.+++...... ...-.....++..|-+.+.-||. ..|||+||..+||+|..++. +.++|||++..
T Consensus 92 ~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 92 IDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred ccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 976 4888888654321 12222336788999999999998 89999999999999965543 58999999875
Q ss_pred c
Q 003059 652 I 652 (852)
Q Consensus 652 ~ 652 (852)
-
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 3
No 453
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=98.71 E-value=4.1e-08 Score=89.54 Aligned_cols=86 Identities=27% Similarity=0.447 Sum_probs=67.3
Q ss_pred EEEeeCccEEEEcCC-CceEeeccCCCC--ceeEEEEcCCccEEEecCCCccccccCCCCCCcccCCCccccCccccccc
Q 003059 93 FQLHSSGTLRLISGS-GAIIWDSNTQRL--NVTSASLDDSGNLVLLKNGGVSAWSSFDNPTDTIVPSQNFTSDKTLRSGY 169 (852)
Q Consensus 93 l~~~~~g~l~l~~~~-~~~vWst~~~~~--~~~~~~l~d~GNlvl~~~~~~~lWQSFD~PTDtlLpg~kl~~~~~l~sG~ 169 (852)
+.+..|||+|+++.. +.+||++++... ....+.|+++|||||++.++..+|+|=..+ ..|.
T Consensus 24 ~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~----------------~~~~ 87 (114)
T smart00108 24 LIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTG----------------ANGN 87 (114)
T ss_pred cCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccC----------------CCCc
Confidence 344578999999765 589999997543 225789999999999999899999982210 1367
Q ss_pred eEEEeecCCceeeeecCceeeeccC
Q 003059 170 YSFTLLKSGNLSLKWNDSVVYFNQG 194 (852)
Q Consensus 170 ~sl~~~~~g~~~~~~~~~~~yw~~g 194 (852)
+.+.++.+|+++++-....+.|.+.
T Consensus 88 ~~~~L~ddGnlvl~~~~~~~~W~Sf 112 (114)
T smart00108 88 YVLVLLDDGNLVIYDSDGNFLWQSF 112 (114)
T ss_pred eEEEEeCCCCEEEECCCCCEEeCCC
Confidence 8899999999999876667889773
No 454
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.71 E-value=7.1e-08 Score=95.61 Aligned_cols=125 Identities=21% Similarity=0.224 Sum_probs=83.1
Q ss_pred eEEEEEECCCcEEEEEEecCcc--------------c-------------chHHHHHHHHHhhccccc--ceeeeeeeec
Q 003059 514 AVYRGVLANRTVVAVKQLEGIE--------------Q-------------GEKQFRMEVATISSTHHL--NLVRLVGFSS 564 (852)
Q Consensus 514 ~Vy~~~~~~~~~vavK~l~~~~--------------~-------------~~~~f~~E~~~l~~l~h~--niv~l~g~~~ 564 (852)
.||.|...++..+|||...... . .....++|.+.|.++..- ++.+++++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899999899999999875210 0 012356899999999765 566777553
Q ss_pred cCceeeEEEeecC--CCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhh-hccccCCCcccCCCCCCceEeCCCCce
Q 003059 565 EGKHRLLVYEFMK--NGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITY-LHEECRDCIVHCDIKPENILLDENYNA 641 (852)
Q Consensus 565 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~y-LH~~~~~~ivH~Dlkp~NILl~~~~~~ 641 (852)
..+|||||++ +..+..+... .++......++.+++..+.. +|. .+|+|+||.+.|||++++ .+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~-------~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDV-------DLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHC-------GGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CE
T ss_pred ---CCEEEEEecCCCccchhhHHhc-------cccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eE
Confidence 4479999998 5555443321 12234556677888886655 466 799999999999999988 99
Q ss_pred EEeecccccccC
Q 003059 642 KVSDFGLAKLIN 653 (852)
Q Consensus 642 kl~DFGla~~~~ 653 (852)
.|+|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999887543
No 455
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.70 E-value=1.6e-07 Score=102.41 Aligned_cols=170 Identities=16% Similarity=0.234 Sum_probs=130.7
Q ss_pred cceEEEEE-ECCCcEEEEEEecCccc-chHHHHHHHHHhhcccccceeeeeeeec----cCceeeEEEeecCC-CCHHHH
Q 003059 512 FGAVYRGV-LANRTVVAVKQLEGIEQ-GEKQFRMEVATISSTHHLNLVRLVGFSS----EGKHRLLVYEFMKN-GSLDNF 584 (852)
Q Consensus 512 fg~Vy~~~-~~~~~~vavK~l~~~~~-~~~~f~~E~~~l~~l~h~niv~l~g~~~----~~~~~~lV~e~~~~-gsL~~~ 584 (852)
-.+.||+. ..+|..|++|+++.... .......-++.++++.|+|||++..++. .+...++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35779988 45788999999963322 2223455678899999999999999876 34578999999975 578777
Q ss_pred hhhcccC----------CccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 585 LFANEEG----------SGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 585 l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
-+..... .+..++++..+.++.|+..||.++|+ .|+.-+-|.+++||++.+.+++|+..|+...+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 7654332 23457788999999999999999999 7888899999999999999999999998877654
Q ss_pred CCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcc
Q 003059 655 KDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRN 704 (852)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p 704 (852)
+.. |.+. --.+-|.=.||.+++.|.||...
T Consensus 446 d~~-----------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT-----------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC-----------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 320 1111 12357888999999999999654
No 456
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.70 E-value=6.7e-09 Score=121.32 Aligned_cols=242 Identities=20% Similarity=0.231 Sum_probs=151.5
Q ss_pred ccccccccceEEEEEECC-CcEEEEEEecCc----ccchHHHHHHHHHhhcccccceeeeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLAN-RTVVAVKQLEGI----EQGEKQFRMEVATISSTHHLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~----~~~~~~f~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+-+-+|.++.++.+.-.. +...+.|..... ....+....+-.++-..+||-++...--+.-....+||++|+.++
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~ 889 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGG 889 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccC
Confidence 357778888887665322 211222222111 111111222222222334555555554455677889999999999
Q ss_pred CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCC-----
Q 003059 580 SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP----- 654 (852)
Q Consensus 580 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~----- 654 (852)
+|...|+... .++.+.....+..+..+++|||. ..++|+|++|.|+|+..++..+++|||.......
T Consensus 890 ~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 890 DLPSKLHNSG-----CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred CchhhhhcCC-----CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 9999886543 34444445567778889999998 5689999999999999999999999984432210
Q ss_pred ----------------C---C----CcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCccccccccc
Q 003059 655 ----------------K---D----HRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSQET 711 (852)
Q Consensus 655 ----------------~---~----~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~~~~~~ 711 (852)
. . +..+......+|+.|.+||...+......+|.|++|++++|.++|..||......
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence 0 0 0001122356899999999999999999999999999999999999999765432
Q ss_pred cchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 712 NRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 712 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
.. ...++...+.....+.+....+.+++...+..+|.+|-.+.
T Consensus 1042 ~~---------------f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1042 QI---------------FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hh---------------hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 11 11122111111112222333344455556677888886654
No 457
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=1.5e-07 Score=98.92 Aligned_cols=132 Identities=17% Similarity=0.096 Sum_probs=95.8
Q ss_pred ceEEEEEECCCcEEEEEEecCccc------------chHHHHHHHHHhhcccccc--eeeeeeeecc-----CceeeEEE
Q 003059 513 GAVYRGVLANRTVVAVKQLEGIEQ------------GEKQFRMEVATISSTHHLN--LVRLVGFSSE-----GKHRLLVY 573 (852)
Q Consensus 513 g~Vy~~~~~~~~~vavK~l~~~~~------------~~~~f~~E~~~l~~l~h~n--iv~l~g~~~~-----~~~~~lV~ 573 (852)
..|++..+ +|+.+.||+...... ....+.+|...+.++...+ .+.++++... ...-+||+
T Consensus 36 rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 36 RRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred ceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 44667666 556799997753221 1124788999988885443 3445555543 23578999
Q ss_pred eecCCC-CHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCC-------CCceEEee
Q 003059 574 EFMKNG-SLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDE-------NYNAKVSD 645 (852)
Q Consensus 574 e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~-------~~~~kl~D 645 (852)
|++++- +|.+++.... ....+...+..++.+++..+.-||+ .+|+|+|++++|||++. +..+.|+|
T Consensus 115 e~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 115 EDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred eeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 999886 8999884321 1234456677899999999999999 89999999999999975 57899999
Q ss_pred cccccc
Q 003059 646 FGLAKL 651 (852)
Q Consensus 646 FGla~~ 651 (852)
|+.++.
T Consensus 189 l~r~~~ 194 (268)
T PRK15123 189 LHRAQI 194 (268)
T ss_pred CCcccc
Confidence 998863
No 458
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=98.68 E-value=5.7e-08 Score=88.90 Aligned_cols=84 Identities=30% Similarity=0.488 Sum_probs=67.1
Q ss_pred Eee-CccEEEEcCC-CceEeeccCCCC--ceeEEEEcCCccEEEecCCCccccccCCCCCCcccCCCccccCccccccce
Q 003059 95 LHS-SGTLRLISGS-GAIIWDSNTQRL--NVTSASLDDSGNLVLLKNGGVSAWSSFDNPTDTIVPSQNFTSDKTLRSGYY 170 (852)
Q Consensus 95 ~~~-~g~l~l~~~~-~~~vWst~~~~~--~~~~~~l~d~GNlvl~~~~~~~lWQSFD~PTDtlLpg~kl~~~~~l~sG~~ 170 (852)
+.. +|+||+++.. +.+||++|+... ....+.|+++|||||+|.++.++|||-... ..+.+
T Consensus 26 ~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~----------------~~~~~ 89 (116)
T cd00028 26 MQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTR----------------VNGNY 89 (116)
T ss_pred CCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecccC----------------CCCce
Confidence 444 8999999764 589999997642 345789999999999999999999984321 13678
Q ss_pred EEEeecCCceeeeecCceeeeccC
Q 003059 171 SFTLLKSGNLSLKWNDSVVYFNQG 194 (852)
Q Consensus 171 sl~~~~~g~~~~~~~~~~~yw~~g 194 (852)
.+.++.+|+++++-....+.|.+.
T Consensus 90 ~~~L~ddGnlvl~~~~~~~~W~Sf 113 (116)
T cd00028 90 VLVLLDDGNLVLYDSDGNFLWQSF 113 (116)
T ss_pred EEEEeCCCCEEEECCCCCEEEcCC
Confidence 899999999999876677889875
No 459
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.58 E-value=1.7e-06 Score=92.12 Aligned_cols=262 Identities=15% Similarity=0.168 Sum_probs=154.7
Q ss_pred ccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcc-cccceeeeeee------eccCc-eeeEEEe
Q 003059 503 FKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISST-HHLNLVRLVGF------SSEGK-HRLLVYE 574 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l-~h~niv~l~g~------~~~~~-~~~lV~e 574 (852)
....||+|+-+.+|-.---.+ .| .|+.....-..+. +.++.|... .||-+-.-+.+ .-+++ ..-++|.
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d-~V-AKIYh~Pppa~~a--qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRD-QV-AKIYHAPPPAAQA--QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecchhhc-hh-heeecCCCchHHH--HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 456799999999996432111 23 3655532221111 122223333 45543331222 11222 2456677
Q ss_pred ecCCC-CHHHHhh-hcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 575 FMKNG-SLDNFLF-ANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 575 ~~~~g-sL~~~l~-~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
.+++. -+.+++. ..++.+-....|.-.++.++.+|.+.+.||+ .|.+-+|+.++|+|+.+++.+.|.|-......
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeec
Confidence 66554 2233332 1233345678899999999999999999999 89999999999999999999999985543332
Q ss_pred CCCCCcceeeeeecCCCCCCChhhhh-----cCCCCCCccchhhhHHHHHHHhC-Cccccccccccc--hhhHHHHHHHH
Q 003059 653 NPKDHRHRTLTSVRGTRGYLAPEWLA-----NLPITSKSDVYSYGMVLLEIVSG-RRNFEVSQETNR--KKFSLWAYEEF 724 (852)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltG-~~p~~~~~~~~~--~~l~~~~~~~~ 724 (852)
.........+|...|.+||.-. +..-+...|.|.||+++++||.| +.||.+...... ..+. ..+
T Consensus 168 ----~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E----~~I 239 (637)
T COG4248 168 ----ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE----TDI 239 (637)
T ss_pred ----cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch----hhh
Confidence 2334455677899999999754 44567889999999999999986 999975422110 0000 011
Q ss_pred hhCCcccccccccCCC----CCCHHHH-HHHHHHHHhcccc--CCCCCCCHHHHHHHHhcCc
Q 003059 725 EKGNVKGIVDKSLAGE----DVDIEQV-MRAIQVSFWCIQE--QPSQRPMMGKVVQMLEGIT 779 (852)
Q Consensus 725 ~~~~~~~~~d~~l~~~----~~~~~~~-~~~~~l~~~cl~~--dp~~RPt~~ev~~~L~~~~ 779 (852)
..+.....-+....-. ..+.+.+ ..+-.+..+|+.. .+.-||+++..+..|..+.
T Consensus 240 a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 240 AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 1111111111111000 1122211 1233445567754 3568999999988887654
No 460
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.45 E-value=7.6e-07 Score=90.55 Aligned_cols=135 Identities=20% Similarity=0.181 Sum_probs=95.1
Q ss_pred ccccccccccccceEEEEEECCCcEEEEEEecCcc-----------------------cchHHHHHHHHHhhccccc--c
Q 003059 501 KGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIE-----------------------QGEKQFRMEVATISSTHHL--N 555 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-----------------------~~~~~f~~E~~~l~~l~h~--n 555 (852)
+.+.++||-|--+.||.|....+.++|||.-+... ......++|.+.|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45678999999999999999999999999643110 0012356789999988655 6
Q ss_pred eeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe
Q 003059 556 LVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 556 iv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl 635 (852)
|.+.+++ +...+||||.++--|...- ++.+..-.++..|++-+..+-. .||||+|+.+-||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILV 235 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEE
Confidence 7776654 3458999999886654322 1222233344444443333333 789999999999999
Q ss_pred CCCCceEEeeccccccc
Q 003059 636 DENYNAKVSDFGLAKLI 652 (852)
Q Consensus 636 ~~~~~~kl~DFGla~~~ 652 (852)
+++|.+.++||--+...
T Consensus 236 ~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 236 TEDGDIVVIDWPQAVPI 252 (304)
T ss_pred ecCCCEEEEeCcccccC
Confidence 99999999999876644
No 461
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=98.37 E-value=2.4e-06 Score=77.59 Aligned_cols=98 Identities=24% Similarity=0.451 Sum_probs=68.2
Q ss_pred ccccCCCceEEEEEecCCCCeeEEEEEeCCeeEEeeC-CC-CCCCCceEEEeeCccEEEEcCCCceEeeccCCCCceeEE
Q 003059 47 SWPSPNSTFSLSFIQRSPNSFIPAITYSGGVPIWTAG-ST-PVDSSAFFQLHSSGTLRLISGSGAIIWDSNTQRLNVTSA 124 (852)
Q Consensus 47 ~l~S~~g~f~lgf~~~~~~~~~~~i~~~~~~~vW~an-~~-p~~~~~~l~~~~~g~l~l~~~~~~~vWst~~~~~~~~~~ 124 (852)
++.+.+|.+.|-|...++ |.|....++++|.++ .. .....+.+.|.++|||||+|..+.+||++.... ..+.+
T Consensus 13 p~~~~s~~~~L~l~~dGn----Lvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~p-tdt~L 87 (114)
T PF01453_consen 13 PLTSSSGNYTLILQSDGN----LVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFDYP-TDTLL 87 (114)
T ss_dssp EEEECETTEEEEEETTSE----EEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTTSS-S-EEE
T ss_pred ccccccccccceECCCCe----EEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecCCC-ccEEE
Confidence 555555899999976655 555545568899994 32 222678999999999999999999999995432 34556
Q ss_pred EEcC--CccEEEecCCCccccccCCCCC
Q 003059 125 SLDD--SGNLVLLKNGGVSAWSSFDNPT 150 (852)
Q Consensus 125 ~l~d--~GNlvl~~~~~~~lWQSFD~PT 150 (852)
..++ +||++ ......+.|.|=+.|+
T Consensus 88 ~~q~l~~~~~~-~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 88 PGQKLGDGNVT-GKNDSLTSWSSNTDPS 114 (114)
T ss_dssp EEET--TSEEE-EESTSSEEEESS----
T ss_pred eccCcccCCCc-cccceEEeECCCCCCC
Confidence 6666 89998 7767788899987774
No 462
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.35 E-value=2.1e-06 Score=87.25 Aligned_cols=107 Identities=22% Similarity=0.285 Sum_probs=84.1
Q ss_pred chHHHHHHHHHhhccccc--ceeeeeeeeccCc----eeeEEEeecCC-CCHHHHhhhcccCCccccchhHHHHHHHhhH
Q 003059 537 GEKQFRMEVATISSTHHL--NLVRLVGFSSEGK----HRLLVYEFMKN-GSLDNFLFANEEGSGKLLNWQSRFNIALGTA 609 (852)
Q Consensus 537 ~~~~f~~E~~~l~~l~h~--niv~l~g~~~~~~----~~~lV~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia 609 (852)
......+|...+.+++.. .+.+.+++..... ..+||+|++++ .+|.+++..... ++......++.+++
T Consensus 54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-----~~~~~~~~ll~~l~ 128 (206)
T PF06293_consen 54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-----LDPSQRRELLRALA 128 (206)
T ss_pred cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-----cchhhHHHHHHHHH
Confidence 345678888888877533 4556667665432 45899999987 489998854221 55566788999999
Q ss_pred hhhhhhccccCCCcccCCCCCCceEeCCCC---ceEEeecccccc
Q 003059 610 RGITYLHEECRDCIVHCDIKPENILLDENY---NAKVSDFGLAKL 651 (852)
Q Consensus 610 ~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~DFGla~~ 651 (852)
+.++-||+ .+|+|+|+++.|||++.+. .+.|+||+-++.
T Consensus 129 ~~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 129 RLIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999 8999999999999999887 899999998764
No 463
>PRK09902 hypothetical protein; Provisional
Probab=98.34 E-value=6.5e-06 Score=82.10 Aligned_cols=137 Identities=18% Similarity=0.116 Sum_probs=103.4
Q ss_pred ccccccceEEEEEECCCcEEEEEEecC----c---ccchHHHHHHHHHhhccccc--ceeeeeeeecc-----CceeeEE
Q 003059 507 LGAGGFGAVYRGVLANRTVVAVKQLEG----I---EQGEKQFRMEVATISSTHHL--NLVRLVGFSSE-----GKHRLLV 572 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~~~~~vavK~l~~----~---~~~~~~f~~E~~~l~~l~h~--niv~l~g~~~~-----~~~~~lV 572 (852)
-|+||-+-|++-.+.+. .+-+|+-++ . ..+...|.+|+..|.++... .+.+++ ++.. .-.-+||
T Consensus 26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 57799999999877655 588887651 1 34678899999999988633 344444 3321 1245899
Q ss_pred EeecCC-CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCc--eEEeecccc
Q 003059 573 YEFMKN-GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYN--AKVSDFGLA 649 (852)
Q Consensus 573 ~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~--~kl~DFGla 649 (852)
+|-+++ .+|.+++.... ..+.+...+..++.+++..++-||+ .++.|+|+.+.|||++.++. ++++||.-.
T Consensus 104 Te~L~g~~~L~~~l~~~~---~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA---VSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEeCCCCccHHHHHhcCC---cCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 997753 68988884322 2245677788999999999999999 89999999999999986667 999999876
Q ss_pred cc
Q 003059 650 KL 651 (852)
Q Consensus 650 ~~ 651 (852)
+.
T Consensus 178 r~ 179 (216)
T PRK09902 178 RR 179 (216)
T ss_pred ch
Confidence 53
No 464
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.33 E-value=1.3e-06 Score=99.54 Aligned_cols=141 Identities=23% Similarity=0.275 Sum_probs=91.2
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccc-----------------------------------------hHHHHH
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG-----------------------------------------EKQFRM 543 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-----------------------------------------~~~f~~ 543 (852)
+-|+.+.-|.||+|++++|+.||||+.+..... +-++..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 358999999999999999999999988632110 012344
Q ss_pred HHHHhhccc----ccceeeeeeeec-cCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccc
Q 003059 544 EVATISSTH----HLNLVRLVGFSS-EGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEE 618 (852)
Q Consensus 544 E~~~l~~l~----h~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~ 618 (852)
|+..+.+++ +..-+.+=..+. -.+...|+|||++|-.+.+....... ..+ +..++..++++ |+-+-
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~----g~d---~k~ia~~~~~~--f~~q~ 281 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA----GID---RKELAELLVRA--FLRQL 281 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc----CCC---HHHHHHHHHHH--HHHHH
Confidence 555544442 222333333333 35678999999999999888533221 122 12222222221 11111
Q ss_pred cCCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 619 CRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 619 ~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
...+++|.|.+|.||+++.++++.+.|||+...+.+
T Consensus 282 ~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 282 LRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 115899999999999999999999999999887654
No 465
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.19 E-value=6.9e-07 Score=101.20 Aligned_cols=101 Identities=27% Similarity=0.427 Sum_probs=77.7
Q ss_pred HHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCC------cceeeeeecCCCCCCChhhhh
Q 003059 605 ALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDH------RHRTLTSVRGTRGYLAPEWLA 678 (852)
Q Consensus 605 ~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~ 678 (852)
+.+++.||.|+|.. ..+||++|.|++|.++.++..||+.|+.+........ .............|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 45566999999984 6799999999999999999999999998865543111 111111123456799999999
Q ss_pred cCCCCCCccchhhhHHHHHHH-hCCccccc
Q 003059 679 NLPITSKSDVYSYGMVLLEIV-SGRRNFEV 707 (852)
Q Consensus 679 ~~~~s~ksDv~s~Gvvl~ell-tG~~p~~~ 707 (852)
....+.++|+||+|+++|-+. .|+.-+..
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a 212 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAA 212 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhc
Confidence 988899999999999999999 45554443
No 466
>smart00473 PAN_AP divergent subfamily of APPLE domains. Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.
Probab=98.17 E-value=4e-06 Score=70.57 Aligned_cols=61 Identities=25% Similarity=0.389 Sum_probs=47.8
Q ss_pred CCceeecccccccCCcccccccccccChhhHHhhhcc-CCcEEEEEeccCCccceEecc-CCCccCC
Q 003059 337 SATMLELPHTKFLTFQPELSSQVFFVGISACRLNCLV-TGSCVASTSLSDGTGLCYLKT-PDFVSGF 401 (852)
Q Consensus 337 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~-nCsC~a~~~~~~~~~~C~~~~-~~~~~~~ 401 (852)
...|+.++++.+++.... .....++++|++.|++ +|+|.||.|.. +++.|++|. ..+.+..
T Consensus 3 ~~~f~~~~~~~l~~~~~~---~~~~~s~~~C~~~C~~~~~~C~s~~y~~-~~~~C~l~~~~~~~~~~ 65 (78)
T smart00473 3 DDCFVRLPNTKLPGFSRI---VISVASLEECASKCLNSNCSCRSFTYNN-GTKGCLLWSESSLGDAR 65 (78)
T ss_pred CceeEEecCccCCCCcce---eEcCCCHHHHHHHhCCCCCceEEEEEcC-CCCEEEEeeCCccccce
Confidence 346899999999865443 2345799999999999 99999999975 567999999 5555444
No 467
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.16 E-value=1.4e-05 Score=82.31 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=85.0
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccc--eeeeeeeeccCceeeEEEeecCCCC-H
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLN--LVRLVGFSSEGKHRLLVYEFMKNGS-L 581 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~lV~e~~~~gs-L 581 (852)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-. +.+++++....+...+|||+++|.. +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 46899999999984 23456778776422 3455788999998886443 4677888877778889999998863 2
Q ss_pred HHHh---------------------hhcccCCccccc--hhHHHHHHH-------hhHh-hhhhhcc-ccCCCcccCCCC
Q 003059 582 DNFL---------------------FANEEGSGKLLN--WQSRFNIAL-------GTAR-GITYLHE-ECRDCIVHCDIK 629 (852)
Q Consensus 582 ~~~l---------------------~~~~~~~~~~l~--~~~~~~i~~-------~ia~-~L~yLH~-~~~~~ivH~Dlk 629 (852)
...+ +.-. .....+. +....+.+. .+.+ ...+|.. .....++|+|+.
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTK-CDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCC-CCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 1111 1100 0000111 000000000 0000 1111111 123457899999
Q ss_pred CCceEeCCCCceEEeecccccc
Q 003059 630 PENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 630 p~NILl~~~~~~kl~DFGla~~ 651 (852)
|.||++++++ +.|+||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999888 99999997753
No 468
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.03 E-value=3.5e-05 Score=80.74 Aligned_cols=142 Identities=14% Similarity=0.079 Sum_probs=86.3
Q ss_pred cccccc-ceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhccc-ccceeeeeeeeccCceeeEEEeecCCCCHHHH
Q 003059 507 LGAGGF-GAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTH-HLNLVRLVGFSSEGKHRLLVYEFMKNGSLDNF 584 (852)
Q Consensus 507 lG~G~f-g~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 584 (852)
|-.|.. ..||+....+ ..+.||+..... ..++.+|++++..+. +--+.+++++....+..++|||+++|.+|...
T Consensus 6 ~~~g~~~~~v~~~~~~~-~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGKN-PGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCCC-CcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 444555 7889987654 678888876443 445778999888874 44566778887777778999999999887644
Q ss_pred hh----------------h--cccCCccccc--hhHHHHH-----------------------HHhhHhhhhhhc-cccC
Q 003059 585 LF----------------A--NEEGSGKLLN--WQSRFNI-----------------------ALGTARGITYLH-EECR 620 (852)
Q Consensus 585 l~----------------~--~~~~~~~~l~--~~~~~~i-----------------------~~~ia~~L~yLH-~~~~ 620 (852)
.. . .......... ...++.. ..++.+.|.... ....
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 21 0 0000000111 0011100 011111111100 1112
Q ss_pred CCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 621 DCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 621 ~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
..++|+|+.|.|||++++..+.|+||+.+..
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 5689999999999999988789999997753
No 469
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.02 E-value=3.7e-05 Score=77.03 Aligned_cols=140 Identities=12% Similarity=0.122 Sum_probs=90.5
Q ss_pred HHHHHhcccccccccccccceEEEEEECCCcEEEEEEecCcc-cchHH---------HHHHHHHhhccccccee---eee
Q 003059 494 KELQRSTKGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIE-QGEKQ---------FRMEVATISSTHHLNLV---RLV 560 (852)
Q Consensus 494 ~el~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~---------f~~E~~~l~~l~h~niv---~l~ 560 (852)
+++....+...+.+-......|.+-..++ +.+++|...... ..++. ..+++..+.+++...+. .++
T Consensus 26 ~~i~~~~~~~~kv~k~~~r~~ValIei~~-~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 26 EKILDNNYKIIKVFKNTKRNYVALIEIDG-KKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHHhCCceEEEeecCCCccEEEEEEECC-cEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 34555566666777777777777776654 568888776322 12222 23445545555433222 222
Q ss_pred eee-----ccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe
Q 003059 561 GFS-----SEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 561 g~~-----~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl 635 (852)
... .-....+|||||++|..|.++.. ++. .++..+.+++.-||+ .|+.|+|.+|.|+++
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv 168 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLV 168 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEE
Confidence 222 22335579999999988766541 221 245677788999999 899999999999999
Q ss_pred CCCCceEEeecccccc
Q 003059 636 DENYNAKVSDFGLAKL 651 (852)
Q Consensus 636 ~~~~~~kl~DFGla~~ 651 (852)
.+++ +++.||+..+.
T Consensus 169 ~~~~-i~iID~~~k~~ 183 (229)
T PF06176_consen 169 SNNG-IRIIDTQGKRM 183 (229)
T ss_pred ECCc-EEEEECccccc
Confidence 9655 99999987653
No 470
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.00 E-value=2.6e-06 Score=95.29 Aligned_cols=184 Identities=18% Similarity=0.133 Sum_probs=132.9
Q ss_pred ccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccc-eeeeeeeeccCceeeEEEeecCCC-C
Q 003059 503 FKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLN-LVRLVGFSSEGKHRLLVYEFMKNG-S 580 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~lV~e~~~~g-s 580 (852)
+.+.+++|+++.+||.+--..+...++.+... ....-++++|.+++||| .+..++-+..+...+++++++..+ +
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 44678899999999876433333344444422 44567899999999999 777777777788899999999776 2
Q ss_pred HHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcce
Q 003059 581 LDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHR 660 (852)
Q Consensus 581 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 660 (852)
-..-.. .....+...+...+.+.-+++|+|||+ ..=+|+| ||+..+ +..|..||+....+.+..
T Consensus 322 ~~~~~~----~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---- 385 (829)
T KOG0576|consen 322 SALEMT----VSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---- 385 (829)
T ss_pred ccccCC----hhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc----
Confidence 211110 011123334445566777889999998 3348898 777665 678999999988765432
Q ss_pred eeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHHHHhCCcccc
Q 003059 661 TLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFE 706 (852)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltG~~p~~ 706 (852)
..+...+++.++|||+.....+..+.|+|++++-..++--|..|-.
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 3445678999999999999999999999999998888877776653
No 471
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.99 E-value=3.5e-05 Score=79.84 Aligned_cols=145 Identities=19% Similarity=0.253 Sum_probs=86.1
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccc--eeeeeeeecc---CceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLN--LVRLVGFSSE---GKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~n--iv~l~g~~~~---~~~~~lV~e~~~~g 579 (852)
+.|+.|..+.||+....+ +.+++|..... .....+..|+.++..+.... +.+++.++.. ....+++|+++++.
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 468999999999999887 57999987755 55667888999988885443 5566664432 33578999999999
Q ss_pred CHHH----------------Hhh---hcccCCccccchh--------HHHHH------------HHhhHh-hhhhhcc--
Q 003059 580 SLDN----------------FLF---ANEEGSGKLLNWQ--------SRFNI------------ALGTAR-GITYLHE-- 617 (852)
Q Consensus 580 sL~~----------------~l~---~~~~~~~~~l~~~--------~~~~i------------~~~ia~-~L~yLH~-- 617 (852)
.+.. .+. ...........+. ..... ...+.+ .+..+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 8877 111 1100000001111 00000 111222 2333332
Q ss_pred --ccCCCcccCCCCCCceEeC-CCCceEEeecccccc
Q 003059 618 --ECRDCIVHCDIKPENILLD-ENYNAKVSDFGLAKL 651 (852)
Q Consensus 618 --~~~~~ivH~Dlkp~NILl~-~~~~~kl~DFGla~~ 651 (852)
.....++|+|+.|.|||++ +++.+.|.||+.+..
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 1346799999999999999 666678999987753
No 472
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.90 E-value=4.1e-05 Score=86.96 Aligned_cols=141 Identities=21% Similarity=0.248 Sum_probs=90.6
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccc--------------------------------------hHHHHHHHH
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG--------------------------------------EKQFRMEVA 546 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------------------------------------~~~f~~E~~ 546 (852)
+-|+.-..|.||+|++++|+.||||+-+..-.. +-+|..|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 459999999999999999999999987632111 113555665
Q ss_pred Hhhcc----cccce---eeeeeeec-cCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccc
Q 003059 547 TISST----HHLNL---VRLVGFSS-EGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEE 618 (852)
Q Consensus 547 ~l~~l----~h~ni---v~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~ 618 (852)
...+. +|-++ |.+=.++. -...+.|+||||+|..+.+.-.-... .++-.. ++..+.++ |++.-
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~----gi~~~~---i~~~l~~~--~~~qI 317 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR----GISPHD---ILNKLVEA--YLEQI 317 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc----CCCHHH---HHHHHHHH--HHHHH
Confidence 54433 35551 22223332 24578999999999988776432221 233332 33333222 22222
Q ss_pred cCCCcccCCCCCCceEeCC----CCceEEeecccccccCC
Q 003059 619 CRDCIVHCDIKPENILLDE----NYNAKVSDFGLAKLINP 654 (852)
Q Consensus 619 ~~~~ivH~Dlkp~NILl~~----~~~~kl~DFGla~~~~~ 654 (852)
...|++|+|-+|.||+++. ++++.+-|||+...+..
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 2267999999999999983 67899999999886643
No 473
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.85 E-value=2.9e-05 Score=77.33 Aligned_cols=105 Identities=19% Similarity=0.216 Sum_probs=82.2
Q ss_pred HHHHHHhhcccc-cceeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccC
Q 003059 542 RMEVATISSTHH-LNLVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECR 620 (852)
Q Consensus 542 ~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 620 (852)
..|..++..+++ +++.+++|+|-+ ++|.||...+++...-. .-..-...+|..|.+||.++++.+.+|++...
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~--~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYR--PLSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccc--ccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 357888888876 599999999954 78999998775532100 00001236899999999999999999998655
Q ss_pred CCcccCCCCCCceEeCCCCceEEeeccccccc
Q 003059 621 DCIVHCDIKPENILLDENYNAKVSDFGLAKLI 652 (852)
Q Consensus 621 ~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 652 (852)
..+.-.|++++|+-+++++++|+.|...+...
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 56888999999999999999999999877654
No 474
>PLN02876 acyl-CoA dehydrogenase
Probab=97.82 E-value=0.00012 Score=90.25 Aligned_cols=78 Identities=9% Similarity=0.193 Sum_probs=58.2
Q ss_pred cccccccccceEEEEEECCC---cEEEEEEecCcc--cchHHHHHHHHHhhccc-ccce--eeeeeeeccC---ceeeEE
Q 003059 504 KDKLGAGGFGAVYRGVLANR---TVVAVKQLEGIE--QGEKQFRMEVATISSTH-HLNL--VRLVGFSSEG---KHRLLV 572 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~---~~vavK~l~~~~--~~~~~f~~E~~~l~~l~-h~ni--v~l~g~~~~~---~~~~lV 572 (852)
.++|+.|.+..+|+....++ ..+++|+..... .....+.+|+++++.+. |.++ .+++.+|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 35789999999999887654 357777765322 23457889999999985 6654 7888888764 467899
Q ss_pred EeecCCCCH
Q 003059 573 YEFMKNGSL 581 (852)
Q Consensus 573 ~e~~~~gsL 581 (852)
|||+++..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999988653
No 475
>PRK10593 hypothetical protein; Provisional
Probab=97.73 E-value=0.00024 Score=76.54 Aligned_cols=76 Identities=9% Similarity=0.046 Sum_probs=57.3
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccc---cceeeeeeeecc---CceeeEEEeecC
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHH---LNLVRLVGFSSE---GKHRLLVYEFMK 577 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h---~niv~l~g~~~~---~~~~~lV~e~~~ 577 (852)
.+.||.|..+.||+....+++ +.+|..+. ......|..|.+.|+.+.. ..+.+++++|.. .+..+||||+++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~ 96 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR 96 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEecc-cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence 356999999999998776664 66676442 2234588999999988853 368888888754 367899999999
Q ss_pred CCCH
Q 003059 578 NGSL 581 (852)
Q Consensus 578 ~gsL 581 (852)
++++
T Consensus 97 G~~~ 100 (297)
T PRK10593 97 GVSV 100 (297)
T ss_pred CEec
Confidence 8765
No 476
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.71 E-value=0.00018 Score=72.82 Aligned_cols=136 Identities=20% Similarity=0.229 Sum_probs=87.4
Q ss_pred cccccccceEEEEEECCCcEEEEEEecCcccc----------hHH---------------HHHHHHHhhccc--ccceee
Q 003059 506 KLGAGGFGAVYRGVLANRTVVAVKQLEGIEQG----------EKQ---------------FRMEVATISSTH--HLNLVR 558 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~----------~~~---------------f~~E~~~l~~l~--h~niv~ 558 (852)
.|..|--+.||+|.-.++..+|||+....... ... ..+|+..|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 57888888999999888999999998632211 111 134666666653 334444
Q ss_pred eeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEeCCC
Q 003059 559 LVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDEN 638 (852)
Q Consensus 559 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl~~~ 638 (852)
-+++. .-.|||||+....+.. .......+.......+..++++.+.-|-.. .++||+||..=|||+. +
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~pA-----P~LkDv~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGLPA-----PRLKDVPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-D 202 (268)
T ss_pred ceeec----CCeEEEEeccCCCCCC-----CCcccCCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-C
Confidence 44443 3479999995431100 000111122224555666666666666542 5799999999999999 8
Q ss_pred CceEEeecccccccC
Q 003059 639 YNAKVSDFGLAKLIN 653 (852)
Q Consensus 639 ~~~kl~DFGla~~~~ 653 (852)
+.+.|+||+-+....
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 899999999887653
No 477
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.71 E-value=0.00015 Score=75.37 Aligned_cols=73 Identities=16% Similarity=0.212 Sum_probs=46.4
Q ss_pred ccccccccc-eEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhccccc---ceeeeeeeeccC---ceeeEEEeecC
Q 003059 505 DKLGAGGFG-AVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHL---NLVRLVGFSSEG---KHRLLVYEFMK 577 (852)
Q Consensus 505 ~~lG~G~fg-~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~---niv~l~g~~~~~---~~~~lV~e~~~ 577 (852)
+.|+.|+.. .||+. + ..+++|..+. .....++..|++++..+... -+.++++..... ...++|||+++
T Consensus 3 ~~~~~gG~~n~vy~~---~-~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL---G-DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc---C-CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 457777776 48875 2 2466776553 33455789999999877532 344455544332 24589999999
Q ss_pred CCCHH
Q 003059 578 NGSLD 582 (852)
Q Consensus 578 ~gsL~ 582 (852)
|.++.
T Consensus 78 G~~l~ 82 (235)
T cd05155 78 GETAT 82 (235)
T ss_pred CCCCC
Confidence 97764
No 478
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.69 E-value=0.0002 Score=74.43 Aligned_cols=73 Identities=14% Similarity=0.093 Sum_probs=48.8
Q ss_pred ccccccccceEEEEEECC--CcEEEEEEecCcccchHHHHHHHHHhhcccccc-eeeeeeeeccCceeeEEEeecCCCCH
Q 003059 505 DKLGAGGFGAVYRGVLAN--RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLN-LVRLVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
+.|..|-...+|+....+ +..+++|..........+.++|+.++..+...+ ..++++.+. ..+||||++|.++
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~l 79 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRTL 79 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCcC
Confidence 457788888999998764 567888977633222233457888888885433 344554433 2489999998776
No 479
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.54 E-value=0.00096 Score=66.81 Aligned_cols=130 Identities=21% Similarity=0.263 Sum_probs=89.9
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcc-----------------cchHHHHHHHHHhhccc------ccceeeeee
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIE-----------------QGEKQFRMEVATISSTH------HLNLVRLVG 561 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-----------------~~~~~f~~E~~~l~~l~------h~niv~l~g 561 (852)
..||+|+.-.||. +++.....||+..... ...+++.+|+.....+. +.+|.+++|
T Consensus 7 ~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 7 DLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred cccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 4699999999996 4555567888876433 23466777877766665 889999999
Q ss_pred eeccCceeeEEEeecCC------CCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe
Q 003059 562 FSSEGKHRLLVYEFMKN------GSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 562 ~~~~~~~~~lV~e~~~~------gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl 635 (852)
+...+...-+|+|...+ .+|.+++... .++. ...+.+.+.. .||-+ ..|+.+|++|+||++
T Consensus 85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~------~~~~-~~~~~L~~f~---~~l~~---~~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEG------GLTE-ELRQALDEFK---RYLLD---HHIVIRDLNPHNIVV 151 (199)
T ss_pred EEecCCceEEEEEEEECCCCCcCccHHHHHHcC------CccH-HHHHHHHHHH---HHHHH---cCCeecCCCcccEEE
Confidence 99999888999998643 3678888432 2443 3333334333 44444 569999999999999
Q ss_pred CCCC----ceEEee-cccc
Q 003059 636 DENY----NAKVSD-FGLA 649 (852)
Q Consensus 636 ~~~~----~~kl~D-FGla 649 (852)
.... .+.|+| ||-.
T Consensus 152 ~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 152 QRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred EecCCCceEEEEEeCCCCc
Confidence 5322 466666 5543
No 480
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.42 E-value=0.00072 Score=64.84 Aligned_cols=128 Identities=16% Similarity=0.223 Sum_probs=85.3
Q ss_pred ccccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccceee-eeeeeccCceeeEEEeecCCCCH
Q 003059 503 FKDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVR-LVGFSSEGKHRLLVYEFMKNGSL 581 (852)
Q Consensus 503 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv~-l~g~~~~~~~~~lV~e~~~~gsL 581 (852)
..+.|++|.+|.||++.+.++ .+|+|.-.. +.....++.|+++|..++-.++.+ ++.|..+ .+.|||..|..|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRGG-EVALKVRRR-DSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeeccCc-eEEEEEecC-CcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcch
Confidence 346799999999999999776 577776552 344567899999999988766654 3433322 345999988888
Q ss_pred HHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCC-CCceEeCCCCceEEeecccccc
Q 003059 582 DNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIK-PENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 582 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk-p~NILl~~~~~~kl~DFGla~~ 651 (852)
.+.-... +-++ +..+++.---|.. .+|-|+.|. |...+|-.++.+.|+||.-|+.
T Consensus 100 ~~~~~~~--------~rk~----l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIGG--------DRKH----LLRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhcc--------cHHH----HHHHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 7755211 1122 2333333222332 678888875 5555555556999999998874
No 481
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.38 E-value=0.00067 Score=71.60 Aligned_cols=139 Identities=14% Similarity=0.106 Sum_probs=78.9
Q ss_pred cccccccceEEEEEECCCcEEEEEEecCcccch-HHHHHHHHHhhcccccce-eeeeeeeccCceeeEEEeecCCCCHHH
Q 003059 506 KLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGE-KQFRMEVATISSTHHLNL-VRLVGFSSEGKHRLLVYEFMKNGSLDN 583 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-~~f~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~~~gsL~~ 583 (852)
.+..|-...+|+... ++..+++|......... -+..+|.++++.+....+ .++++.+. ..+||||++|..+..
T Consensus 3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL 77 (256)
T ss_pred cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence 356677889998874 45568888765322211 246788888888864433 34444432 368999999876542
Q ss_pred H-----------------hhhcccCCccccchhHH-HHHHHhh---------Hhhhhhhcc-----ccCCCcccCCCCCC
Q 003059 584 F-----------------LFANEEGSGKLLNWQSR-FNIALGT---------ARGITYLHE-----ECRDCIVHCDIKPE 631 (852)
Q Consensus 584 ~-----------------l~~~~~~~~~~l~~~~~-~~i~~~i---------a~~L~yLH~-----~~~~~ivH~Dlkp~ 631 (852)
- |+... .....++...+ .+...++ ...+..+.. ..+..++|+|+.|.
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQP-RFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 1 11111 11112222111 1111111 111111111 11346899999999
Q ss_pred ceEeCCCCceEEeecccccc
Q 003059 632 NILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 632 NILl~~~~~~kl~DFGla~~ 651 (852)
||++++++ ++|+||..+..
T Consensus 157 Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 157 NLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cEEEeCCC-CEEEeccccCc
Confidence 99999877 78999997764
No 482
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.33 E-value=0.0016 Score=72.23 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=53.7
Q ss_pred ccccccccceEEEEEECCC-cEEEEEEecC------c--ccchHHHHHHHHHhhccc---ccceeeeeeeeccCceeeEE
Q 003059 505 DKLGAGGFGAVYRGVLANR-TVVAVKQLEG------I--EQGEKQFRMEVATISSTH---HLNLVRLVGFSSEGKHRLLV 572 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~-~~vavK~l~~------~--~~~~~~f~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lV 572 (852)
+.||.|.+..||++...++ +.|+||.-.. . ....+++..|.+.|..+. ..++.+++.+.. +..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEE
Confidence 5699999999999998876 4899997431 1 223456777888887753 345777877743 567899
Q ss_pred EeecCCCC
Q 003059 573 YEFMKNGS 580 (852)
Q Consensus 573 ~e~~~~gs 580 (852)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 483
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.29 E-value=0.00083 Score=72.77 Aligned_cols=143 Identities=20% Similarity=0.157 Sum_probs=84.6
Q ss_pred ccccccccceEEEEEECC-------CcEEEEEEecCcccchHHHHHHHHHhhcccccce-eeeeeeeccCceeeEEEeec
Q 003059 505 DKLGAGGFGAVYRGVLAN-------RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNL-VRLVGFSSEGKHRLLVYEFM 576 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~ 576 (852)
+.|..|-...+|+....+ ++.+++|+.........+...|.+++..+....+ .++++++.. .+|+||+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i 79 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI 79 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence 346667777899988655 4778899876543344456788888887753333 355555542 3589999
Q ss_pred CCCCHHHHh-----------------hhcccCC------ccccchhHHHHH--------------------------HHh
Q 003059 577 KNGSLDNFL-----------------FANEEGS------GKLLNWQSRFNI--------------------------ALG 607 (852)
Q Consensus 577 ~~gsL~~~l-----------------~~~~~~~------~~~l~~~~~~~i--------------------------~~~ 607 (852)
+|..+.... +...... ....-|.....+ ...
T Consensus 80 ~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (302)
T cd05156 80 PSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLED 159 (302)
T ss_pred CCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHH
Confidence 887764321 1111000 001111111111 112
Q ss_pred hHhhhhhhcc------ccCCCcccCCCCCCceEeCCC----CceEEeecccccc
Q 003059 608 TARGITYLHE------ECRDCIVHCDIKPENILLDEN----YNAKVSDFGLAKL 651 (852)
Q Consensus 608 ia~~L~yLH~------~~~~~ivH~Dlkp~NILl~~~----~~~kl~DFGla~~ 651 (852)
+...+..|.. ..+..++|+|+.+.|||++++ +.++|+||..+..
T Consensus 160 ~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 160 EAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 2222333321 134679999999999999985 8899999998764
No 484
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.26 E-value=0.0017 Score=64.54 Aligned_cols=124 Identities=23% Similarity=0.310 Sum_probs=89.1
Q ss_pred hccccccccccccc-ceEEEEEECCCcEEEEEEecC-----c-------c----------cchHHHHHHHHHhhccc---
Q 003059 499 STKGFKDKLGAGGF-GAVYRGVLANRTVVAVKQLEG-----I-------E----------QGEKQFRMEVATISSTH--- 552 (852)
Q Consensus 499 ~~~~~~~~lG~G~f-g~Vy~~~~~~~~~vavK~l~~-----~-------~----------~~~~~f~~E~~~l~~l~--- 552 (852)
+...|.+.||.|.- |.|||+.+.+ +.+|+|.+.. . . .-..-|..|....++|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g-~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDG-RIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECC-eEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67788999999999 9999999855 5899999321 0 0 01134788999888885
Q ss_pred ccce--eeeeeeeccC------------------ceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhh
Q 003059 553 HLNL--VRLVGFSSEG------------------KHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGI 612 (852)
Q Consensus 553 h~ni--v~l~g~~~~~------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L 612 (852)
+.++ |+.+||..-. ..+.||.||.+... .+. .+-+.+|.+-|
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------------~~~----~~~~~~~~~dl 177 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------------PLQ----IRDIPQMLRDL 177 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------ccc----hhHHHHHHHHH
Confidence 4455 8999986211 13457888875532 111 23356777888
Q ss_pred hhhccccCCCcccCCCCCCceEeCCCCceEEeecccc
Q 003059 613 TYLHEECRDCIVHCDIKPENILLDENYNAKVSDFGLA 649 (852)
Q Consensus 613 ~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 649 (852)
..+|. .+|+-+|+++.|.. .-||+|||.+
T Consensus 178 ~~~~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 178 KILHK---LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHH---CCeeeccCcccccc-----CCEEEecccC
Confidence 88998 89999999999986 5689999854
No 485
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=97.19 E-value=0.00046 Score=57.22 Aligned_cols=53 Identities=21% Similarity=0.367 Sum_probs=40.6
Q ss_pred eeecccccccCCcccccccccccChhhHHhhhccCCcEEEEEeccCCccceEeccCC
Q 003059 340 MLELPHTKFLTFQPELSSQVFFVGISACRLNCLVTGSCVASTSLSDGTGLCYLKTPD 396 (852)
Q Consensus 340 f~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~~C~~~~~~ 396 (852)
|..+++++++..+... ....+.++|++.|+.||+|.||.|. .+.+.|+++...
T Consensus 6 ~~~~~~~~~~g~d~~~---~~~~s~~~Cq~~C~~~~~C~afT~~-~~~~~C~lk~~~ 58 (73)
T cd01100 6 FRQGSNVDFRGGDLST---VFASSAEQCQAACTADPGCLAFTYN-TKSKKCFLKSSE 58 (73)
T ss_pred ccccCCCccccCCcce---eecCCHHHHHHHcCCCCCceEEEEE-CCCCeEEcccCC
Confidence 4445677777766542 2356899999999999999999997 345789998864
No 486
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.03 E-value=0.0036 Score=67.54 Aligned_cols=143 Identities=15% Similarity=0.159 Sum_probs=86.0
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccc--eeeeeee------eccCceeeEEEeec
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLN--LVRLVGF------SSEGKHRLLVYEFM 576 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~n--iv~l~g~------~~~~~~~~lV~e~~ 576 (852)
+.|..|....+|+....++ .+++|+... ....+...|++++..+++.+ +.+++.. ....+..++|++|+
T Consensus 20 ~~i~~G~~n~~y~v~~~~~-~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i 96 (296)
T cd05153 20 EGISAGIENTNYFVTTDSG-RYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL 96 (296)
T ss_pred ecccCccccceEEEEeCCC-cEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence 4577888889999876555 588888764 33456777888888775433 4444432 12344668999999
Q ss_pred CCCCHHH----Hh----------hhcccC------CccccchhHHHH----------HHHhhHhhhhhhcc----ccCCC
Q 003059 577 KNGSLDN----FL----------FANEEG------SGKLLNWQSRFN----------IALGTARGITYLHE----ECRDC 622 (852)
Q Consensus 577 ~~gsL~~----~l----------~~~~~~------~~~~l~~~~~~~----------i~~~ia~~L~yLH~----~~~~~ 622 (852)
+|..+.. .+ +..... ......|..... ....+...+.++.+ ..+.+
T Consensus 97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (296)
T cd05153 97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG 176 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence 9877532 01 110000 001122222110 11112233344432 22357
Q ss_pred cccCCCCCCceEeCCCCceEEeeccccc
Q 003059 623 IVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 623 ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
++|+|+.|.|||++++..+.|.||+.+.
T Consensus 177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 177 VIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCccCcCcccEEEeCCceEEEeehhhhc
Confidence 9999999999999998778999998775
No 487
>PRK05231 homoserine kinase; Provisional
Probab=96.99 E-value=0.0051 Score=67.21 Aligned_cols=143 Identities=11% Similarity=0.137 Sum_probs=78.5
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccc--eeeeee------eeccCceeeEEEeec
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLN--LVRLVG------FSSEGKHRLLVYEFM 576 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~n--iv~l~g------~~~~~~~~~lV~e~~ 576 (852)
+.|..|....+|+....++ .+++|+.+ ....+....|+.++..|...+ +.+++. +....+..++++||+
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l 104 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL 104 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence 4577788789999887666 47888876 222334444555555553222 333332 122345678999999
Q ss_pred CCCCHHH-----------Hh---hhcccC------Cccccch-hHHHH------------HHHh-hHhhhhhhcc----c
Q 003059 577 KNGSLDN-----------FL---FANEEG------SGKLLNW-QSRFN------------IALG-TARGITYLHE----E 618 (852)
Q Consensus 577 ~~gsL~~-----------~l---~~~~~~------~~~~l~~-~~~~~------------i~~~-ia~~L~yLH~----~ 618 (852)
+|..+.. .| +..... ....+.| ..... ...+ +...++.+.. .
T Consensus 105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 184 (319)
T PRK05231 105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA 184 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence 9875421 11 111100 0011112 11111 1111 1112222221 1
Q ss_pred cCCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 619 CRDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 619 ~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
.+.+++|+|+++.|||++.+....|+||+.+.
T Consensus 185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred CCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 34689999999999999977666899999775
No 488
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.96 E-value=0.0028 Score=67.51 Aligned_cols=73 Identities=18% Similarity=0.331 Sum_probs=49.4
Q ss_pred cccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhccc---ccceeeeeeeeccCceeeEEEeecCCC
Q 003059 504 KDKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTH---HLNLVRLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 504 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lV~e~~~~g 579 (852)
.+.|+.|....+|+.. .+++.+.||.-. ......|..|.+-|+.|. --.+.+++++....+..+||+||++.+
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 3568989999999987 567789999876 444567899999888884 446788899888777889999999776
No 489
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.80 E-value=0.013 Score=63.65 Aligned_cols=144 Identities=15% Similarity=0.192 Sum_probs=82.6
Q ss_pred ccccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccc--eeeeeeee------ccCceeeEEEeec
Q 003059 505 DKLGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLN--LVRLVGFS------SEGKHRLLVYEFM 576 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~n--iv~l~g~~------~~~~~~~lV~e~~ 576 (852)
+.++.|-...+|+....+++ +++|+.... ...++...|++++..|.... +.+++... ...+..++|+||+
T Consensus 28 ~~~~~G~~n~~y~v~t~~~~-~vLK~~~~~-~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i 105 (307)
T TIGR00938 28 KGIAEGVENSNYLLTTDVGR-YILTLYEKR-VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFL 105 (307)
T ss_pred cccCCccccceEEEEeCCCc-EEEEEecCC-CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeC
Confidence 45777777899998766554 667876532 12345566777776664322 34444321 2245678999999
Q ss_pred CCCCHHH-----------H---hhhcccCC--c-----cccchhHHHH------------HHHhhHhhhhhhcc----cc
Q 003059 577 KNGSLDN-----------F---LFANEEGS--G-----KLLNWQSRFN------------IALGTARGITYLHE----EC 619 (852)
Q Consensus 577 ~~gsL~~-----------~---l~~~~~~~--~-----~~l~~~~~~~------------i~~~ia~~L~yLH~----~~ 619 (852)
+|..+.. . ++.....- . ..-.|..... ....+.+.++++.. ..
T Consensus 106 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~ 185 (307)
T TIGR00938 106 QGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDL 185 (307)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 8865421 0 11111100 0 0112221110 01112334444432 23
Q ss_pred CCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 620 RDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 620 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+.+++|+|+++.||++++++...|.||+.+.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 4789999999999999998877899999775
No 490
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.64 E-value=0.0011 Score=69.26 Aligned_cols=134 Identities=14% Similarity=0.160 Sum_probs=88.1
Q ss_pred ccccccccccccceEEEEEECCCcEEEEEEecCc-------c----------cc------hHHHHHHHHHhhcccc--cc
Q 003059 501 KGFKDKLGAGGFGAVYRGVLANRTVVAVKQLEGI-------E----------QG------EKQFRMEVATISSTHH--LN 555 (852)
Q Consensus 501 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~-------~----------~~------~~~f~~E~~~l~~l~h--~n 555 (852)
+.+.++||-|--+.||.+...+|++.++|.-.-. . .. .-...+|...|+.|.. --
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 4567899999999999999999999998853210 0 00 0123467777877753 23
Q ss_pred eeeeeeeeccCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhccccCCCcccCCCCCCceEe
Q 003059 556 LVRLVGFSSEGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILL 635 (852)
Q Consensus 556 iv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NILl 635 (852)
+.+.++++ ..++|||++.+-.|...-+ ..+..+++. .+..-+.-|.. +|+||+|..-=||+|
T Consensus 174 VPkpiD~~----RH~Vvmelv~g~Pl~~v~~--------v~d~~~ly~---~lm~~Iv~la~---~GlIHgDFNEFNimv 235 (465)
T KOG2268|consen 174 VPKPIDHN----RHCVVMELVDGYPLRQVRH--------VEDPPTLYD---DLMGLIVRLAN---HGLIHGDFNEFNIMV 235 (465)
T ss_pred CCCccccc----ceeeHHHhhcccceeeeee--------cCChHHHHH---HHHHHHHHHHH---cCceecccchheeEE
Confidence 44555443 4589999998876654321 122222222 22222233333 899999999999999
Q ss_pred CCCCceEEeeccccccc
Q 003059 636 DENYNAKVSDFGLAKLI 652 (852)
Q Consensus 636 ~~~~~~kl~DFGla~~~ 652 (852)
++++.++++||--....
T Consensus 236 ~dd~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 236 KDDDKIVVIDFPQMVST 252 (465)
T ss_pred ecCCCEEEeechHhhcc
Confidence 99999999999765443
No 491
>PLN02236 choline kinase
Probab=96.57 E-value=0.0096 Score=65.60 Aligned_cols=142 Identities=20% Similarity=0.190 Sum_probs=82.3
Q ss_pred cccccccceEEEEEECC-----CcEEEEEEecCcccchHHHHHHHHHhhccccccee-eeeeeeccCceeeEEEeecCCC
Q 003059 506 KLGAGGFGAVYRGVLAN-----RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLV-RLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 506 ~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lV~e~~~~g 579 (852)
.|-.|-.-.+|+....+ ++.|++|.........-+...|..++..+...++. ++++.+..+ .|+||+++.
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g~ 118 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHAR 118 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCCC
Confidence 45557778899987532 35788887764332222347788888888654444 556665433 589999887
Q ss_pred CHHHH-----------------hhhccc-CCccccchhHHHHHHHhhH-----------------hhhhh----hcc-cc
Q 003059 580 SLDNF-----------------LFANEE-GSGKLLNWQSRFNIALGTA-----------------RGITY----LHE-EC 619 (852)
Q Consensus 580 sL~~~-----------------l~~~~~-~~~~~l~~~~~~~i~~~ia-----------------~~L~y----LH~-~~ 619 (852)
+|..- +|.... .......|....++..++. ..+.. +.. ..
T Consensus 119 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~ 198 (344)
T PLN02236 119 TLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQ 198 (344)
T ss_pred CCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCC
Confidence 76421 111110 1111222333333332211 11111 121 12
Q ss_pred CCCcccCCCCCCceEeCC-CCceEEeecccccc
Q 003059 620 RDCIVHCDIKPENILLDE-NYNAKVSDFGLAKL 651 (852)
Q Consensus 620 ~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~ 651 (852)
+..++|+|+++.|||+++ ++.++|+||..+..
T Consensus 199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 356899999999999986 47899999988764
No 492
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.51 E-value=0.0096 Score=72.13 Aligned_cols=196 Identities=18% Similarity=0.168 Sum_probs=128.9
Q ss_pred HHHHHHHhhcccccceeeeeeeeccCcee----eEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhc
Q 003059 541 FRMEVATISSTHHLNLVRLVGFSSEGKHR----LLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLH 616 (852)
Q Consensus 541 f~~E~~~l~~l~h~niv~l~g~~~~~~~~----~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH 616 (852)
.+.|.+.+.++.|+|++.++.|-.++... .+..|++..-++...+.. ...++....+.+..++.+||+|+|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-----v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-----VGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-----ccccCHHHHHHHHHHHhhhHHHHH
Confidence 45677788899999999999987654322 345667777777777642 335778888889999999999999
Q ss_pred cccCCCcccCCCCCC---ceEeCCCCceEEe--ecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCC--Cccch
Q 003059 617 EECRDCIVHCDIKPE---NILLDENYNAKVS--DFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITS--KSDVY 689 (852)
Q Consensus 617 ~~~~~~ivH~Dlkp~---NILl~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~--ksDv~ 689 (852)
+ ....|.-+..+ +...+.++...++ ||+..+.+..... .....-+..+.++|......+.. ..|+|
T Consensus 304 ~---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~----~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 304 S---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK----SFSDLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred H---hccceeEEecccccccccCccceeecchhhhcccccCCCccc----chhhcCccccccccccccccchhhhhhHHH
Confidence 8 34455444444 4445566667776 8888776543221 11122345677888776655544 47999
Q ss_pred hhhHHHHHHHhCCccccccccccchhhHHHHHHHHhhCCcccccccccCCCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 003059 690 SYGMVLLEIVSGRRNFEVSQETNRKKFSLWAYEEFEKGNVKGIVDKSLAGEDVDIEQVMRAIQVSFWCIQEQPSQRPMMG 769 (852)
Q Consensus 690 s~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~cl~~dp~~RPt~~ 769 (852)
.+|..+..+..|..+-.... ....+++... .. ........|+..++++|+...
T Consensus 377 ~lgll~~~~~~~~~i~~~~~------------------~~~~~l~~~~-----~~----~~~d~~~~~~~~~~~~Rl~~~ 429 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKSA------------------VPVSLLDVLS-----TS----ELLDALPKCLDEDSEERLSAL 429 (1351)
T ss_pred HHHHHHhhhhhcCccccccc------------------chhhhhcccc-----ch----hhhhhhhhhcchhhhhccchh
Confidence 99999999998876532111 0011111110 00 234455569999999999999
Q ss_pred HHHHHH
Q 003059 770 KVVQML 775 (852)
Q Consensus 770 ev~~~L 775 (852)
+++...
T Consensus 430 ~ll~~~ 435 (1351)
T KOG1035|consen 430 ELLTHP 435 (1351)
T ss_pred hhhhch
Confidence 988654
No 493
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.45 E-value=0.012 Score=62.57 Aligned_cols=32 Identities=34% Similarity=0.548 Sum_probs=26.5
Q ss_pred CCcccCCCCCCceEeCCCCc-eEEeeccccccc
Q 003059 621 DCIVHCDIKPENILLDENYN-AKVSDFGLAKLI 652 (852)
Q Consensus 621 ~~ivH~Dlkp~NILl~~~~~-~kl~DFGla~~~ 652 (852)
..++|+|+++.|||++++++ .-|.||+.+..-
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 45899999999999997555 569999988753
No 494
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.02 E-value=0.0027 Score=78.21 Aligned_cols=161 Identities=16% Similarity=0.077 Sum_probs=116.2
Q ss_pred HHHHHHhhcccccceeeeeeeec--cCceeeEEEeecCCCCHHHHhhhcccCCccccchhHHHHHHHhhHhhhhhhcccc
Q 003059 542 RMEVATISSTHHLNLVRLVGFSS--EGKHRLLVYEFMKNGSLDNFLFANEEGSGKLLNWQSRFNIALGTARGITYLHEEC 619 (852)
Q Consensus 542 ~~E~~~l~~l~h~niv~l~g~~~--~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~ 619 (852)
..|...++...|+++.....-.. +..+.+.+++|+..|.+...|.+... ....++..-+...-.+...+..-.|...
T Consensus 1277 l~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~e-e~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLE-ESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccc-cCCcchhchHHHHHHHHHhccchhhhcc
Confidence 34445556678998877665443 34577899999999999999876543 2334444444333334355555555432
Q ss_pred --CCCcccCCCCCCceEeCCCCceEEeecccccccCCCCCcceeeeeecCCCCCCChhhhhcCCCCCCccchhhhHHHHH
Q 003059 620 --RDCIVHCDIKPENILLDENYNAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLE 697 (852)
Q Consensus 620 --~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDv~s~Gvvl~e 697 (852)
..-.+|+++|+-|.+|..+.++|+.++|+.+...+. ........+++-|+.|+......++.|+|+|..++.+|+
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~---~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV---LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCch---HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 234799999999999999999999999999943321 122334567788999999999999999999999999999
Q ss_pred HHhCCcccc
Q 003059 698 IVSGRRNFE 706 (852)
Q Consensus 698 lltG~~p~~ 706 (852)
+--|..+|.
T Consensus 1433 rs~~n~~fi 1441 (2724)
T KOG1826|consen 1433 RSDGNAYFI 1441 (2724)
T ss_pred HhcccHHHH
Confidence 988887763
No 495
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.00 E-value=0.039 Score=59.30 Aligned_cols=140 Identities=20% Similarity=0.286 Sum_probs=78.8
Q ss_pred ceEEEEEECCCcEEEEEEec---CcccchHHHHHHHHHhhcccc--cceeeeeeeeccCc--eeeEEEeecCCCCHHHH-
Q 003059 513 GAVYRGVLANRTVVAVKQLE---GIEQGEKQFRMEVATISSTHH--LNLVRLVGFSSEGK--HRLLVYEFMKNGSLDNF- 584 (852)
Q Consensus 513 g~Vy~~~~~~~~~vavK~l~---~~~~~~~~f~~E~~~l~~l~h--~niv~l~g~~~~~~--~~~lV~e~~~~gsL~~~- 584 (852)
-.+|..... +++.+++ .. ..........+|..+|+.+.- .-+...+++|.++. ..+.||+|++|..+...
T Consensus 39 n~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~ 116 (321)
T COG3173 39 NDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSAL 116 (321)
T ss_pred cceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcC
Confidence 344544433 6667777 33 222333455677778777642 34455677787766 77999999988432211
Q ss_pred -----------------hhh---cc----c--------CCccccchhHHHHHHH--------hhHhhhhhhccc-----c
Q 003059 585 -----------------LFA---NE----E--------GSGKLLNWQSRFNIAL--------GTARGITYLHEE-----C 619 (852)
Q Consensus 585 -----------------l~~---~~----~--------~~~~~l~~~~~~~i~~--------~ia~~L~yLH~~-----~ 619 (852)
|.. -. . ..++.-.|...++.++ ....-..+|++. .
T Consensus 117 ~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~ 196 (321)
T COG3173 117 PPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAG 196 (321)
T ss_pred CcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCC
Confidence 110 00 0 0011112222221111 111222333321 2
Q ss_pred CCCcccCCCCCCceEeCCCCceEEeecccccccCC
Q 003059 620 RDCIVHCDIKPENILLDENYNAKVSDFGLAKLINP 654 (852)
Q Consensus 620 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 654 (852)
+..++|+|+++.||+++.+..+-|.||+++..-.+
T Consensus 197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred CceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 35699999999999999999999999999986544
No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.87 E-value=0.061 Score=58.42 Aligned_cols=141 Identities=16% Similarity=0.240 Sum_probs=84.8
Q ss_pred ccccccceEEEEEECCCcEEEEEEecCcccchHHHHHHHHHhhcccccce---ee---eeee--eccC--ceeeEEEeec
Q 003059 507 LGAGGFGAVYRGVLANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNL---VR---LVGF--SSEG--KHRLLVYEFM 576 (852)
Q Consensus 507 lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~ni---v~---l~g~--~~~~--~~~~lV~e~~ 576 (852)
|.+ .-..+|+....+++. ++|..+.. ....+...|++.+..+.-..| ++ +-|- ..-. .+.+-|++|+
T Consensus 34 l~s-~eN~~f~~~~~~g~~-iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l 110 (331)
T COG2334 34 LNS-EENSNFRVQTEDGRY-ILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYL 110 (331)
T ss_pred ccc-ccCceEEEEecCCCe-EEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEec
Confidence 444 456789998888876 88888765 666777778888776642221 12 1121 1223 3788999999
Q ss_pred CCCCHHH-H--------------hhhc-------ccCCccccchhH-------------HHHHHHhhHhhhhhhccc---
Q 003059 577 KNGSLDN-F--------------LFAN-------EEGSGKLLNWQS-------------RFNIALGTARGITYLHEE--- 618 (852)
Q Consensus 577 ~~gsL~~-~--------------l~~~-------~~~~~~~l~~~~-------------~~~i~~~ia~~L~yLH~~--- 618 (852)
+|..+.. . |+.. .........|.. ......++...+..+++.
T Consensus 111 ~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~ 190 (331)
T COG2334 111 PGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPA 190 (331)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchh
Confidence 9988872 1 1110 011112344441 001223333344444332
Q ss_pred -cCCC---cccCCCCCCceEeCCCCc-eEEeeccccc
Q 003059 619 -CRDC---IVHCDIKPENILLDENYN-AKVSDFGLAK 650 (852)
Q Consensus 619 -~~~~---ivH~Dlkp~NILl~~~~~-~kl~DFGla~ 650 (852)
.+.. +||+|+.|.||+++.+.. +.+.||+-+.
T Consensus 191 ~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 191 HLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 1223 999999999999999885 8999999775
No 497
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.85 E-value=0.015 Score=59.23 Aligned_cols=125 Identities=19% Similarity=0.181 Sum_probs=62.4
Q ss_pred CcEEEEEEecCcccchHHHHHHHHHhhcccccce-eeeeeeeccCceeeEEEeecCCCCHHHH-------h---------
Q 003059 523 RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNL-VRLVGFSSEGKHRLLVYEFMKNGSLDNF-------L--------- 585 (852)
Q Consensus 523 ~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~~~gsL~~~-------l--------- 585 (852)
.+.|+||+........-....|..+++.+...++ .++++++.++ +|+||+++..|..- +
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~g----~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~ 77 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLGPKIIYFFENG----RVEEFIEGRTLSPEDFRNPEILKRIAKLLAK 77 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSSS-EEEEETTE----EEEE--SSEE--CGGGGSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCCCeEEEEcCCC----cEEEEecccccChhhccChHHHHHHHHHHHH
Confidence 3568888877555555667789999988865544 4566655443 57799877665221 1
Q ss_pred -hhccc--CCccccchhHHHHH----------------------HHhhHhhhhhhcc-----ccCCCcccCCCCCCceEe
Q 003059 586 -FANEE--GSGKLLNWQSRFNI----------------------ALGTARGITYLHE-----ECRDCIVHCDIKPENILL 635 (852)
Q Consensus 586 -~~~~~--~~~~~l~~~~~~~i----------------------~~~ia~~L~yLH~-----~~~~~ivH~Dlkp~NILl 635 (852)
|.... .....--|....++ ...+..-+..+.+ ..+..+.|.|+.+.|||+
T Consensus 78 lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~ 157 (211)
T PF01633_consen 78 LHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILI 157 (211)
T ss_dssp HHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEE
T ss_pred HhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEe
Confidence 11000 01111112222222 0111111111111 112468999999999999
Q ss_pred -CCCCceEEeecccccc
Q 003059 636 -DENYNAKVSDFGLAKL 651 (852)
Q Consensus 636 -~~~~~~kl~DFGla~~ 651 (852)
+.++.++|+||..+..
T Consensus 158 ~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 158 NNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp TSSSSCEEE--GTT-EE
T ss_pred ccCCCeEEEecHHHHhh
Confidence 8899999999987753
No 498
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.81 E-value=0.04 Score=59.85 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=28.8
Q ss_pred CCCcccCCCCCCceEeCCCCceEEeecccccc
Q 003059 620 RDCIVHCDIKPENILLDENYNAKVSDFGLAKL 651 (852)
Q Consensus 620 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 651 (852)
+.+++|+|+.+.|||+++++.+.|+||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 46899999999999999999999999987764
No 499
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.71 E-value=0.067 Score=58.08 Aligned_cols=30 Identities=30% Similarity=0.349 Sum_probs=26.1
Q ss_pred CCCcccCCCCCCceEeCCCCceEEeeccccc
Q 003059 620 RDCIVHCDIKPENILLDENYNAKVSDFGLAK 650 (852)
Q Consensus 620 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 650 (852)
+.+++|+|+++.||+++. +.+.|+||+.+.
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 367999999999999988 678999998665
No 500
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.55 E-value=0.051 Score=59.55 Aligned_cols=143 Identities=14% Similarity=0.179 Sum_probs=80.8
Q ss_pred ccccccccceEEEEEECC----CcEEEEEEecCcccchHHHHHHHHHhhccccccee-eeeeeeccCceeeEEEeecCCC
Q 003059 505 DKLGAGGFGAVYRGVLAN----RTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLV-RLVGFSSEGKHRLLVYEFMKNG 579 (852)
Q Consensus 505 ~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~~f~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lV~e~~~~g 579 (852)
+.|..|-.-.+|+....+ +..|++|+........-+..+|..++..+..-++- ++++++.. + +|.+|+++.
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~-G---~i~~fi~g~ 95 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGN-G---MIQSFINAR 95 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCC-c---EeehhhcCC
Confidence 345557777889887543 23788888764332223346788888888655553 56666532 2 589999776
Q ss_pred CHHHH-------h----------hhcccC-CccccchhHHHHHHHhhH-------------------------hhhhhhc
Q 003059 580 SLDNF-------L----------FANEEG-SGKLLNWQSRFNIALGTA-------------------------RGITYLH 616 (852)
Q Consensus 580 sL~~~-------l----------~~~~~~-~~~~l~~~~~~~i~~~ia-------------------------~~L~yLH 616 (852)
.|..- + |..... ...+--|..+.++..++. ..+..+.
T Consensus 96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 65221 1 111100 111222333333322221 1111111
Q ss_pred -c-ccCCCcccCCCCCCceEeCC-CCceEEeecccccc
Q 003059 617 -E-ECRDCIVHCDIKPENILLDE-NYNAKVSDFGLAKL 651 (852)
Q Consensus 617 -~-~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~ 651 (852)
. ..+.-+.|.|+.+.|||+++ ++.++++||..+-.
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 1 11234799999999999975 57899999998764
Done!