BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003062
(852 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224101241|ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
gi|222852017|gb|EEE89564.1| dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/834 (65%), Positives = 653/834 (78%), Gaps = 19/834 (2%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+ I+KE CTL+LP + P+QT+ QGNIKTLKQ ACLEACKKLH GALTDN
Sbjct: 626 YFKPAPRCIIDKETMTCTLHLPKSSPVQTICVQGNIKTLKQKACLEACKKLHVSGALTDN 685
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+V+EE A+ GNE YD E PIY PPELV++ P++ K Y+CYLIEL QNF YDIP
Sbjct: 686 LVPDIVMEEAVAEDVGNERYDDEQPIYLPPELVSRGPRNLKTKYYCYLIELNQNFAYDIP 745
Query: 152 AHDIVLAVRTELESE-IKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR 210
HD+VL VRTELES+ I+ + FDLE +RG LTVNL+++G I L VLLCRRFQI LF+
Sbjct: 746 VHDVVLVVRTELESDVIRSMGFDLEAERGLLTVNLRYIGDIDLERVLVLLCRRFQITLFK 805
Query: 211 VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPA----SEQSIDWEPVASLSFPCDIGLKHH 266
V++DH+++KL E+L+GL L EIDY LLPA S+ SI+W P++S+ F + H
Sbjct: 806 VLLDHSVNKLKEVLEGLDLGSGAEIDYFLLPAFRSCSQPSINWAPISSVLF--SYKNEEH 863
Query: 267 KNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA 326
NCS NA VVQTK GP+C C++ NS+VCTPH+G IY ITGV LN NSL DGGA
Sbjct: 864 FNCSRNGNAHVVQTKCGPVCACVLQNSLVCTPHNGNIYCITGVFEDLNGNSLLKMGDGGA 923
Query: 327 ITYKKHYEER------------YGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSK 374
ITYK+++ +R +GIQL F++E LL G+ IF N L++CR++K++
Sbjct: 924 ITYKEYFAKRPMSDLKLTLDFRHGIQLLFNREPLLKGKHIFPVHNLLNRCRKQKEKASKN 983
Query: 375 ISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT 434
ELPPELC II+ P+S+ST YS+TF+PSIMHRL+SLL+AVNLK M DH +Q+V IP+
Sbjct: 984 THVELPPELCEIILSPISISTLYSYTFIPSIMHRLESLLIAVNLKKMHSDHYLQHVNIPS 1043
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
KVLEAITT KCQE F+LESLETLGDSFLKYAASQQLFK YQNHHEGLLS KKD+IISNA
Sbjct: 1044 MKVLEAITTNKCQENFNLESLETLGDSFLKYAASQQLFKIYQNHHEGLLSFKKDKIISNA 1103
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
ALC+ GC+HKL GFIR E FDPK+W+IPG GS L++ L RKIY+ GR+KVKSKT
Sbjct: 1104 ALCRRGCNHKLQGFIRNESFDPKLWIIPGGKLGSDFLSEEPLSKGRKIYIRGRRKVKSKT 1163
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLL 614
+ADVVEALIGA+LSTGGE L+F+D IGIKVDF+N PYER Q+QAE+ VNVR+LESLL
Sbjct: 1164 IADVVEALIGAYLSTGGEVTALLFMDWIGIKVDFMNTPYERHIQLQAEKFVNVRYLESLL 1223
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT+++Y +YP +SPG LT
Sbjct: 1224 NYSFNDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITLHMYKEYPGMSPGLLT 1283
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF 734
D+RSASVNNDCYALS+VK GL +HILHAS +L+K I TV + SLESTFGWESET+F
Sbjct: 1284 DLRSASVNNDCYALSAVKVGLDRHILHASHDLHKHIVATVKKIQEFSLESTFGWESETAF 1343
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PK LGD+IESL+GAI VDSG NKEVVFESIRPLLEP+ITPET+RLQP RELNE CQ+ HF
Sbjct: 1344 PKVLGDVIESLAGAILVDSGYNKEVVFESIRPLLEPLITPETLRLQPVRELNELCQRQHF 1403
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
KK + R A+VT+EV ANG +FKHT ADK TAKK+ASKEVLK+LK S
Sbjct: 1404 DYKKPIVSRNGRNASVTIEVEANGLIFKHTATVADKTTAKKLASKEVLKALKES 1457
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 28/30 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDPS TV SFIQSRGRARMQNSDYLLM+KR
Sbjct: 524 FDPSATVSSFIQSRGRARMQNSDYLLMVKR 553
>gi|255547506|ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative [Ricinus communis]
Length = 1388
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/822 (64%), Positives = 653/822 (79%), Gaps = 4/822 (0%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKPTP+ I+KEM CTL LP +C I T+ +GN+K +KQ ACLEACK+LH+IGAL DN
Sbjct: 564 YFKPTPRCLIDKEMERCTLLLPKSCSIHTISVEGNVKIIKQKACLEACKQLHKIGALNDN 623
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VVEE AQ+ GN PYD EHP+YFPPELV Q Q ++ Y+CYLIEL QNF Y+IP
Sbjct: 624 LVPDIVVEETVAQQSGNGPYDDEHPMYFPPELVGQASQKSEAKYYCYLIELNQNFVYEIP 683
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
H+ VLA+R+ELES+I ++ DLE DRG L V LK++G+I LTP+ V++CR+F I + +V
Sbjct: 684 VHNFVLAMRSELESDILGLDLDLEADRGLLMVKLKYIGEIHLTPETVIMCRKFLITVLKV 743
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLP----ASEQSIDWEPVASLSFPCDIGLKHHK 267
++DH++DKL +ILKGL LR+ EIDYLLLP + SIDW+ V S+ F + L+ HK
Sbjct: 744 LVDHSIDKLEDILKGLKLRNGPEIDYLLLPLVGSCQKPSIDWDAVTSVLFSYENVLEDHK 803
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NC A V+QTK G +C C + NSVV TPH+G++Y+I G L HLN +SL +G
Sbjct: 804 NCPLKEAACVIQTKDGVVCKCTLQNSVVYTPHNGKVYFIDGTLDHLNGHSLLELRNGYHK 863
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
+Y ++Y++++GI+L FDQ+LLL GR IF QNYL++CRQ+K+++ ELPPELC I
Sbjct: 864 SYMEYYKDQHGIKLHFDQQLLLRGRHIFPLQNYLNRCRQQKEKDSQNAYVELPPELCHIF 923
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
M P+S+S+FYSFTFVPSIMHRL+SLL+A NLK + LDHCMQ+V IPT KVLEAITTKKCQ
Sbjct: 924 MSPISISSFYSFTFVPSIMHRLESLLIASNLKKLHLDHCMQSVAIPTIKVLEAITTKKCQ 983
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
E FHLESLETLGDSFLKYA QQLFKTYQNHHEGLLS+KKD++ISNA LC+LGCD K+PG
Sbjct: 984 EKFHLESLETLGDSFLKYAVGQQLFKTYQNHHEGLLSIKKDKLISNATLCRLGCDSKIPG 1043
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E FDPK W+IP + SG Y L++ L N RK+Y+ R+K+K K +ADVVEALIGA+L
Sbjct: 1044 FIRNESFDPKNWLIPDEISGCYSLSEEILSNGRKMYIKRRRKLKEKMIADVVEALIGAYL 1103
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
STGGE GL+FLD IGIK DF+N+PYER F++ E+ VN+ HLESLL YSFRDP LLVEA
Sbjct: 1104 STGGEIAGLLFLDWIGIKADFLNMPYERGFEMNPEKYVNICHLESLLKYSFRDPCLLVEA 1163
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYMLPEIPRCYQRLEFLGD+VLDYLITV+LY KYP +SPG LTDMRSASVNNDCYA
Sbjct: 1164 LTHGSYMLPEIPRCYQRLEFLGDSVLDYLITVHLYEKYPGMSPGLLTDMRSASVNNDCYA 1223
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
S+V+ GLHK+ILHASQ+L+K I TV + + S ESTFGWESE SFPK LGD+IESL+G
Sbjct: 1224 QSAVREGLHKYILHASQKLHKDIVSTVANCKEFSSESTFGWESEISFPKVLGDVIESLAG 1283
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SIRPLLEP+ITPET+RL P REL E CQK HF +K V R NG
Sbjct: 1284 AIFVDSGYNKEVVFNSIRPLLEPLITPETIRLHPTRELTELCQKQHFDRRKPVVSRNNGM 1343
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+ VTVEV ANG +FKHT A A+++TAK++ASKEVL++LK S
Sbjct: 1344 SCVTVEVEANGVVFKHTSAAAERKTAKRLASKEVLRALKDSL 1385
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDPS TV SFIQSRGRARMQNSDYLLM+K
Sbjct: 461 FDPSTTVSSFIQSRGRARMQNSDYLLMVK 489
>gi|224109196|ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
gi|222864159|gb|EEF01290.1| dicer-like protein [Populus trichocarpa]
Length = 1408
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/823 (65%), Positives = 643/823 (78%), Gaps = 8/823 (0%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P I+KE CTL+LP + PIQ + QGN K LKQ ACLEACK+LH IGALTDN
Sbjct: 576 YFKPAPICIIDKEKETCTLHLPKSSPIQNICVQGNNKNLKQKACLEACKQLHLIGALTDN 635
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PDVV EE AQ+ NE YD E PIY PPEL +Q P++ K Y+CYLIEL Q F+Y +P
Sbjct: 636 LVPDVVEEEAVAQEIRNERYDDEQPIYLPPELASQGPRNLKTKYYCYLIELNQKFDYGVP 695
Query: 152 AHDIVLAVRTELESEI-KKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR 210
HDIVL +RTELES++ + F+LE +RG L V+L+++G I L VLLCRRFQI LF
Sbjct: 696 VHDIVLVMRTELESDVLSSMGFELEAERGLLAVSLRYIGDIYLDQVPVLLCRRFQITLFE 755
Query: 211 VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPA----SEQSIDWEPVASLSFPCDIGLKHH 266
V++ ++KL E+LKGL L + +DY LLPA S+ SIDWEP++S+ F + H
Sbjct: 756 VLIHREVNKLEEVLKGLELGTGVVMDYFLLPAIRSRSQPSIDWEPISSVLF--SYKNEDH 813
Query: 267 KNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA 326
NCS+ NA VV TK GP+CTC++ NS+VCTPH+G +Y+ITG LN SL +G A
Sbjct: 814 FNCSSKGNAHVVHTKGGPVCTCVLQNSLVCTPHNGNVYFITGASEDLNGRSLLKLRNGSA 873
Query: 327 ITYKKHYEERY-GIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCR 385
ITYK+H+ +R IQL FDQE LL GR IF N+L++CR +K++E +LPPELC
Sbjct: 874 ITYKEHFAKRRNSIQLLFDQEPLLEGRHIFPVHNFLNRCRTKKEKESKNAHVDLPPELCD 933
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKK 445
II+ P+S+ST YS+TF+PSIMHRL+SLL+AVNLK M DHCMQNV IP KVLEAITTKK
Sbjct: 934 IILSPVSISTLYSYTFIPSIMHRLESLLIAVNLKKMHSDHCMQNVDIPAMKVLEAITTKK 993
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
CQE FHLESLETLGDSFLKYAASQQLFK YQNHHEGLLS+KK++IISNAALC+ GCDHKL
Sbjct: 994 CQEKFHLESLETLGDSFLKYAASQQLFKLYQNHHEGLLSMKKEKIISNAALCRRGCDHKL 1053
Query: 506 PGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA 565
PGFIR E FDPK+WMIPGD GS L++ L RKIYV GR+KVKSKTVADVVEALIGA
Sbjct: 1054 PGFIRNESFDPKLWMIPGDKCGSDLLSEEPLSECRKIYVRGRRKVKSKTVADVVEALIGA 1113
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLV 625
+LSTGGE + L F+D IGIKVDF+ VPYER FQ+QAE+ VNVR+LESLLNYSFRDPSLLV
Sbjct: 1114 YLSTGGEVLALFFMDWIGIKVDFMIVPYERHFQLQAEKFVNVRYLESLLNYSFRDPSLLV 1173
Query: 626 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
EALTHGSYMLPEIP CYQRLEFLGDAVLDYLIT++LY +YP +SPG LTD+RSASVNNDC
Sbjct: 1174 EALTHGSYMLPEIPSCYQRLEFLGDAVLDYLITMHLYKEYPGMSPGLLTDLRSASVNNDC 1233
Query: 686 YALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESL 745
YA S+VK LHKHILH SQ+L+K I T + F++ SL STFGWESETSFPK LGD+IESL
Sbjct: 1234 YAQSAVKGDLHKHILHTSQDLHKHIVETAEIFQKSSLGSTFGWESETSFPKVLGDVIESL 1293
Query: 746 SGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRIN 805
+GAI VDSG NKE+VF+SIRPLLEP+ITP T+RL PAREL+E CQK HF KK+V
Sbjct: 1294 AGAILVDSGYNKEIVFQSIRPLLEPLITPATVRLHPARELSELCQKQHFDYKKSVVSYNG 1353
Query: 806 GKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
A++T+ V ANG FKHT ADK+TAKK+ASKEVLKSLK S
Sbjct: 1354 RNASITIVVGANGVTFKHTATAADKKTAKKLASKEVLKSLKES 1396
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP +V SFIQSRGRARMQNSDYLLM+K
Sbjct: 473 FDPPSSVSSFIQSRGRARMQNSDYLLMVK 501
>gi|359476600|ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/828 (62%), Positives = 637/828 (76%), Gaps = 19/828 (2%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKPTP+ IN++MG CT+Y P +CPIQTV +GNIKTLKQ ACLEACK+LH+ GALTDN
Sbjct: 577 YFKPTPRCSINQDMGTCTIYHPKSCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDN 636
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+P +V EE + N PYD E Y+PPEL+N +D YHCYLIEL Q + Y++
Sbjct: 637 LVPQIVEEEAIVAQDENMPYDDEQATYYPPELINPSLKDPVTPYHCYLIELDQKYEYEVS 696
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
IVLAVR+ELE ++ VNFDL+VDRG +TV++ ++G I LT ++VL+CR+FQI L RV
Sbjct: 697 PQGIVLAVRSELEYDVGNVNFDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRV 756
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS-----IDWEPVASLSFPCDIGLKHH 266
++D +DK + L ++ +DYL+LP++ +DW+ + S+ F H
Sbjct: 757 LIDRAIDK--GVFDRYDLGNDQMVDYLMLPSTNSREIPSIVDWKCLGSVFFS-------H 807
Query: 267 KNCSTMSNARV--VQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG 324
+N S + TKSG +C+C + NS+V TPH+ Q Y ITG+LG LN NS + +G
Sbjct: 808 ENASNHMGCFFPRMHTKSGFVCSCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNG 867
Query: 325 GAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELC 384
G +TYK++Y R+GI+L FD E LL GRR+F QNYL +CRQ+K++E S + ELPPELC
Sbjct: 868 GLLTYKEYYRLRHGIELQFDGEKLLKGRRMFVVQNYLQRCRQQKEKELSNTTVELPPELC 927
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
I M P+S+S YSF+ +PSIMHR++SLLLAVNLKN+ L++C QN IPT KVLEAITTK
Sbjct: 928 VIFMSPISISIIYSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTK 986
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
CQEGFHLESLETLGDSFLKYAASQQLFKT+QNHHEGLLSVKK+RIISNA+LCKLGCD K
Sbjct: 987 HCQEGFHLESLETLGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRK 1046
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
LPGFIR E FDPK W+I GD S S+ + L + RKIYV+ R+K+KSK +ADVVEALIG
Sbjct: 1047 LPGFIRNESFDPKKWIIAGDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIG 1106
Query: 565 AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLL 624
AFLSTGGE LIF+ +GI VDFV VPY+R F V +R VNV +LES+LNYSFRDPSLL
Sbjct: 1107 AFLSTGGETAALIFMRWLGINVDFVKVPYKRDFPVILKRHVNVSYLESILNYSFRDPSLL 1166
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL+T++LY+KYP +SPG LTD+RSASVNND
Sbjct: 1167 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNND 1226
Query: 685 CYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIES 744
CYA S+VK LH+HILH+SQEL++ I +TV +F++L +ESTFGWESE+SFPK LGD+IES
Sbjct: 1227 CYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIES 1286
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRI 804
L+GAI VDS NKEVVF+SIRPLLEP+ITPET++L PAREL E CQK H+ +K+ V +
Sbjct: 1287 LAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKLHPARELGELCQKEHYDIKRVVVSQ- 1345
Query: 805 NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPGT 852
NGKA+VT+EV ANG KHT + +DK TA K+ASKEVLKSLK S T
Sbjct: 1346 NGKASVTIEVEANGAKHKHT-STSDKRTATKLASKEVLKSLKESIAQT 1392
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 28/29 (96%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDPS TVCSFIQSRGRARMQNSDYLLM+K
Sbjct: 474 FDPSATVCSFIQSRGRARMQNSDYLLMVK 502
>gi|297735235|emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/828 (62%), Positives = 637/828 (76%), Gaps = 19/828 (2%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKPTP+ IN++MG CT+Y P +CPIQTV +GNIKTLKQ ACLEACK+LH+ GALTDN
Sbjct: 523 YFKPTPRCSINQDMGTCTIYHPKSCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDN 582
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+P +V EE + N PYD E Y+PPEL+N +D YHCYLIEL Q + Y++
Sbjct: 583 LVPQIVEEEAIVAQDENMPYDDEQATYYPPELINPSLKDPVTPYHCYLIELDQKYEYEVS 642
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
IVLAVR+ELE ++ VNFDL+VDRG +TV++ ++G I LT ++VL+CR+FQI L RV
Sbjct: 643 PQGIVLAVRSELEYDVGNVNFDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRV 702
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS-----IDWEPVASLSFPCDIGLKHH 266
++D +DK + L ++ +DYL+LP++ +DW+ + S+ F H
Sbjct: 703 LIDRAIDK--GVFDRYDLGNDQMVDYLMLPSTNSREIPSIVDWKCLGSVFFS-------H 753
Query: 267 KNCSTMSNARV--VQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG 324
+N S + TKSG +C+C + NS+V TPH+ Q Y ITG+LG LN NS + +G
Sbjct: 754 ENASNHMGCFFPRMHTKSGFVCSCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNG 813
Query: 325 GAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELC 384
G +TYK++Y R+GI+L FD E LL GRR+F QNYL +CRQ+K++E S + ELPPELC
Sbjct: 814 GLLTYKEYYRLRHGIELQFDGEKLLKGRRMFVVQNYLQRCRQQKEKELSNTTVELPPELC 873
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
I M P+S+S YSF+ +PSIMHR++SLLLAVNLKN+ L++C QN IPT KVLEAITTK
Sbjct: 874 VIFMSPISISIIYSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTK 932
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
CQEGFHLESLETLGDSFLKYAASQQLFKT+QNHHEGLLSVKK+RIISNA+LCKLGCD K
Sbjct: 933 HCQEGFHLESLETLGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRK 992
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
LPGFIR E FDPK W+I GD S S+ + L + RKIYV+ R+K+KSK +ADVVEALIG
Sbjct: 993 LPGFIRNESFDPKKWIIAGDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIG 1052
Query: 565 AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLL 624
AFLSTGGE LIF+ +GI VDFV VPY+R F V +R VNV +LES+LNYSFRDPSLL
Sbjct: 1053 AFLSTGGETAALIFMRWLGINVDFVKVPYKRDFPVILKRHVNVSYLESILNYSFRDPSLL 1112
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL+T++LY+KYP +SPG LTD+RSASVNND
Sbjct: 1113 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNND 1172
Query: 685 CYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIES 744
CYA S+VK LH+HILH+SQEL++ I +TV +F++L +ESTFGWESE+SFPK LGD+IES
Sbjct: 1173 CYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIES 1232
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRI 804
L+GAI VDS NKEVVF+SIRPLLEP+ITPET++L PAREL E CQK H+ +K+ V +
Sbjct: 1233 LAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKLHPARELGELCQKEHYDIKRVVVSQ- 1291
Query: 805 NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPGT 852
NGKA+VT+EV ANG KHT + +DK TA K+ASKEVLKSLK S T
Sbjct: 1292 NGKASVTIEVEANGAKHKHT-STSDKRTATKLASKEVLKSLKESIAQT 1338
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 28/29 (96%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDPS TVCSFIQSRGRARMQNSDYLLM+K
Sbjct: 420 FDPSATVCSFIQSRGRARMQNSDYLLMVK 448
>gi|147833654|emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
Length = 1296
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/828 (62%), Positives = 636/828 (76%), Gaps = 19/828 (2%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKPTP+ IN++MG CT+YLP +CPIQTV +GNIKTLKQ ACLEACK+LH+ GALTDN
Sbjct: 479 YFKPTPRCSINQDMGTCTIYLPKSCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDN 538
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+P +V EE + N PYD E Y+PPEL+N +D YHCYLIEL Q + Y++
Sbjct: 539 LVPQIVEEEAIVAQDENMPYDDEQATYYPPELINPSLKDPVTPYHCYLIELBQKYEYEVS 598
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
IVLAVR+ELE ++ VNFDL+VDRG +TV++ ++G I LT ++VL+CR+FQI L RV
Sbjct: 599 PQGIVLAVRSELEYDVGNVNFDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRV 658
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS-----IDWEPVASLSFPCDIGLKHH 266
++D +DK + L ++ +DYL+LP++ +DW+ + S+ F H
Sbjct: 659 LIDRAIDK--GVFDRYDLGNDQMVDYLMLPSTNSREIPSIVDWKCLGSVFFS-------H 709
Query: 267 KNCSTMSNARV--VQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG 324
+N S + TKSG +C+C + NS+V TPH+ Q Y ITG+LG LN NS + +G
Sbjct: 710 ENASNHMGCFFPRMHTKSGFVCSCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNG 769
Query: 325 GAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELC 384
G +TYK++Y R+GI+L FD E LL GRR+F QNYL +CRQ+K++E S + ELPPELC
Sbjct: 770 GLLTYKEYYXLRHGIELQFDGEKLLKGRRMFVVQNYLQRCRQQKEKELSNTTVELPPELC 829
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
I M P+S+S YSF+ +PSIMHR++SLLLAVNLKN+ L++C QN IPT KVLEAITTK
Sbjct: 830 VIFMSPISISIIYSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTK 888
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
CQEGFHLESLETLGDSFLKYAASQQLFKT+QNHHEGLLSVKK+RIISNA+LCKLGCD K
Sbjct: 889 HCQEGFHLESLETLGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRK 948
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
LPGFIR E FDPK W+I GD S S+ + L + RKIYV+ R+K+KSK +ADVVEALIG
Sbjct: 949 LPGFIRNESFDPKKWIIAGDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIG 1008
Query: 565 AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLL 624
AFLSTGGE LIF+ +GI VDFV VPY+R F V +R VNV +LES+LNYSFRDPSLL
Sbjct: 1009 AFLSTGGETAALIFMRWLGINVDFVKVPYKRDFPVILKRHVNVSYLESILNYSFRDPSLL 1068
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
VE+LTHGSYMLPEIPRCYQRLEFLGDAVLDYL+T++LY+KYP +SPG LTD+RSASVNND
Sbjct: 1069 VESLTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNND 1128
Query: 685 CYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIES 744
CYA S+VK LH+HILH+SQEL++ I +TV F++L ESTFGWESE+SFPK LGD+IES
Sbjct: 1129 CYAQSAVKAKLHQHILHSSQELHRHIVVTVGBFDKLPXESTFGWESESSFPKVLGDVIES 1188
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRI 804
L+GAI VDS NKEVVF+SIRPLLEP+ITPET++L PAREL E CQK H+ +K+ V +
Sbjct: 1189 LAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKLHPARELXELCQKEHYXIKRVVVSQ- 1247
Query: 805 NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPGT 852
NGKA+VT+EV ANG KHT + +DK TA K+ASKEVLKSLK S T
Sbjct: 1248 NGKASVTIEVEANGAKHKHT-STSDKRTAXKLASKEVLKSLKESIAQT 1294
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 28/29 (96%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDPS TVCSFIQSRGRARMQNSDYLLM++
Sbjct: 376 FDPSATVCSFIQSRGRARMQNSDYLLMVR 404
>gi|449442659|ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 1393
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/923 (54%), Positives = 648/923 (70%), Gaps = 79/923 (8%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK-----------RYFK---------------P 35
FDPS TVCSFIQSRGRARM+NSDY+LM+K RY P
Sbjct: 472 FDPSSTVCSFIQSRGRARMKNSDYILMVKSGDSTTLSRLQRYLASGEIMRNESLCHASLP 531
Query: 36 TPKF--DINKE----------------MGICTLY---LPNNC------------------ 56
F D ++E +G+ Y LP++C
Sbjct: 532 CVPFRSDYDEESYYVESTGAVVTLSSSVGLIYFYCSRLPSDCYFKPTPRWDKETCTLHLP 591
Query: 57 ---PIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQKHGNEPYDA 113
P+QT ++ + K KQ ACLEACK+LH+ GALTDNL+P +V EE AQ+ GN+P D
Sbjct: 592 KSSPLQTFSSKDDAKYSKQRACLEACKQLHKCGALTDNLVPQIVAEESVAQEIGNKPLDD 651
Query: 114 EHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFD 173
E PIY PPE V+ CP ++ + YHCYLIELKQNF+YDI AH+IVLA+RTELE E++ + D
Sbjct: 652 EQPIYVPPEFVHCCPHNSSVVYHCYLIELKQNFHYDISAHNIVLAMRTELEFEVQSMCHD 711
Query: 174 LEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHN----LDKLNEILKGLWL 229
L+VDRG VN K++G I+L+P++VLL R+FQ +F+V+++H L + NEI G
Sbjct: 712 LDVDRGSFDVNFKYVGIIKLSPEQVLLSRQFQRTIFKVLLNHTWTNKLSENNEICLG--- 768
Query: 230 RDNLEIDYLLLPAS-EQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTC 288
D +DYLLLP++ + I WE V S+ H S+ + V TKSG +C C
Sbjct: 769 -DGPRVDYLLLPSTGGELISWEIVLSVLVSSQEYCVHRGISSSKDVSYDVPTKSGLVCIC 827
Query: 289 MIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELL 348
+ NSVV TPH+G +Y IT VL LN NSL + YK++Y+ R+GI L F+++ L
Sbjct: 828 RLQNSVVYTPHNGHVYCITSVLSELNGNSLLKIRKNEMMAYKEYYKVRHGIDLRFEKQPL 887
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKISF-ELPPELCRIIMGPMSLSTFYSFTFVPSIMH 407
L G++IF NY+ + R+ K++ S+ S ELPPELC IIM P+S++T YS++F+P IMH
Sbjct: 888 LRGKKIFPVHNYIKRFRKHKEQGESRNSLVELPPELCSIIMSPISVNTLYSYSFLPFIMH 947
Query: 408 RLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
RL+S+L+A NLK + DHCMQN IPT+KVLEAITTKKCQE F+LESLETLGDSFLKYA
Sbjct: 948 RLESMLIASNLKKLNSDHCMQN-DIPTTKVLEAITTKKCQEKFNLESLETLGDSFLKYAT 1006
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
Q LF+T+QN HEGLL++KKDRI+SNAAL + GC+HK+ GFIR E FDP+ W IPGD
Sbjct: 1007 GQHLFRTFQNDHEGLLTLKKDRIVSNAALRRRGCEHKISGFIRDEAFDPQNWDIPGDTHE 1066
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
Y+L + LF+ RK+YV ++K+KSK +ADVVEALIGA+LSTGGE + FL+RIGI+V+
Sbjct: 1067 VYQLREEVLFSGRKVYVQRKRKIKSKRIADVVEALIGAYLSTGGEKAAMQFLNRIGIEVN 1126
Query: 588 FVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
F VPYER F+V +L+NV HLESLL Y+F D SLL+EA+THGSYMLPEIPRCYQRLEF
Sbjct: 1127 FDFVPYERPFRVDVHKLINVGHLESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQRLEF 1186
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGD+VLDY ITV+LYNKYP ++P LTDMRSASV+NDCY+ +++K LHK ILH S +L+
Sbjct: 1187 LGDSVLDYAITVHLYNKYPGMTPELLTDMRSASVSNDCYSRTALKAQLHKSILHCSHDLH 1246
Query: 708 KWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
K I+ V +FE LS E+T+GWESE SFPK LGD+IESL+GAI+VDSG +KE+VF SIRPL
Sbjct: 1247 KHISSAVQNFETLSSEATYGWESEISFPKVLGDVIESLAGAIYVDSGYDKEIVFRSIRPL 1306
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHAD 827
LEP+++PET++ P RELNE CQK ++ +KKTV R+NG++ VTVEV NG +FKHT
Sbjct: 1307 LEPLVSPETLKKHPRRELNELCQKENYKLKKTVTSRVNGRSYVTVEVEVNGRIFKHTEIS 1366
Query: 828 ADKETAKKVASKEVLKSLKASFP 850
D+ET +KVASKEVLKSLK ++P
Sbjct: 1367 LDRETGEKVASKEVLKSLKEAYP 1389
>gi|356533095|ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1414
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/822 (56%), Positives = 604/822 (73%), Gaps = 22/822 (2%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKPT ++D KE G TLYLP +CP+Q + +G+ K LK ACLEACK+LH+IGAL+DN
Sbjct: 579 YFKPTLRWD--KETG--TLYLPKSCPLQPIRVEGDKKILKNIACLEACKQLHKIGALSDN 634
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+V+EE + ++ GNEPYD P + P LVN +++ YHCY +E F+YD+
Sbjct: 635 LVPDIVMEEAEVEELGNEPYDENQPTFVPFGLVNSVSNNSQTVYHCYFMEFNNKFSYDVS 694
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
DI L +R EL+ EI + FD+ DRG L+VN ++ G I L+PD+VLLC++FQ+ + R+
Sbjct: 695 VQDIFLLMRIELDPEIGCMQFDMGFDRGSLSVNFRYKGTINLSPDQVLLCKKFQVTILRI 754
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ----SIDWEPVASLSFPCDIGLKHHK 267
++DH+++KL L +L D+LEIDYLLLPA + +I+W V S++ P ++ K+H+
Sbjct: 755 LIDHDMNKLTAGLDRCYLEDDLEIDYLLLPAMGKGKYTAINWLAVNSVN-PSEVSCKYHE 813
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHS-GQI-YYITGVLGHLNANSLFTRNDGG 325
++TKSG +C+C + N++VCT H G+I +YI L+ NS GG
Sbjct: 814 PH--------IRTKSGLVCSCKLQNALVCTSHPIGKISFYIATGTMELDGNSPMELRGGG 865
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCR 385
TYKK+YE+ +GIQL F+ + LL R IF +N+ +Q K+ E SK ELPPELC
Sbjct: 866 VTTYKKYYEQHHGIQLQFEHQRLLKARHIFQVKNHCHGRKQGKEGEVSKAFVELPPELCS 925
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKK 445
I+M P+S S YS++F+PSIMHR +SLL A NLK M LDHC +N I T KVLEAITTK+
Sbjct: 926 IVMMPISDSLIYSYSFIPSIMHRFESLLGAFNLKKMHLDHCARN-EIQTIKVLEAITTKR 984
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
C+E FH ESLETLGDSFLKYAASQQLFKTY NHHEGLLS+K+++IISNAALCKLGC L
Sbjct: 985 CKEAFHYESLETLGDSFLKYAASQQLFKTYHNHHEGLLSLKREKIISNAALCKLGCSSGL 1044
Query: 506 PGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA 565
PGFIR EPFDP W+IPGD S++L + + + IYV+G++K++ K VADVVEALIGA
Sbjct: 1045 PGFIRNEPFDPNTWIIPGDKPRSFKLKE-LVAKGKTIYVSGKRKLRQKIVADVVEALIGA 1103
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLV 625
FLSTGGE L+F+D +GIKV F +PY+R F +Q E+LVNV LES LNYSF D SLLV
Sbjct: 1104 FLSTGGEKAALLFMDWVGIKVSFNKIPYDRHFDIQPEKLVNVSFLESQLNYSFHDRSLLV 1163
Query: 626 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
EA+THGSYMLPE+PRCYQRLEFLGD+VLDYLIT +LYNKYP ++PG LTDMRSASVNNDC
Sbjct: 1164 EAVTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNKYPGMTPGQLTDMRSASVNNDC 1223
Query: 686 YALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESL 745
YA S++KHGLHKH+LHASQEL+ ++ T++ F++LS STFG+E+ETS PK LGDI+ESL
Sbjct: 1224 YAWSAIKHGLHKHVLHASQELHMHVSATLNKFDKLSSLSTFGYEAETSLPKVLGDIVESL 1283
Query: 746 SGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRIN 805
+GAI VDSG NKEVV++SIRPLLEP++TPET++L P RELNE CQK + + R +
Sbjct: 1284 AGAILVDSGYNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIILEDVSRKD 1343
Query: 806 GKAAVTVEVHANGTLFKHTH-ADADKETAKKVASKEVLKSLK 846
G +EV A+G + K+ + DA ++TAKK+ KE+L SLK
Sbjct: 1344 GLTYYRMEVEADGIIHKYEYKGDALRDTAKKIVCKEILNSLK 1385
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 28/29 (96%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP HTVCSFIQSRGRARMQNSDY+LM+K
Sbjct: 476 FDPCHTVCSFIQSRGRARMQNSDYILMVK 504
>gi|356532427|ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1421
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/822 (57%), Positives = 599/822 (72%), Gaps = 22/822 (2%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P++D KE G TLYLP +CP+Q + +GN K LK ACLEACK+LH+IGALTDN
Sbjct: 612 YFKPAPRWD--KETG--TLYLPKSCPLQPICVEGNKKHLKNIACLEACKQLHKIGALTDN 667
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+V+EE + ++ GNEPYD P + P LVN ++ YHCYL+EL QNF+YDI
Sbjct: 668 LVPDIVIEEAEVEEFGNEPYDENQPTFVPFGLVNSVSNNSHTIYHCYLMELSQNFSYDIS 727
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
DI LA+R EL+ EI FD+ DRG +++ L++ G I L+P+ VLLC++FQ+ L
Sbjct: 728 VQDIFLAIRIELDPEIGCTQFDMGFDRGSVSLKLRYKGTINLSPNLVLLCKKFQVTLLGS 787
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPA---SEQS-IDWEPVASLSFPCDIGLKHHK 267
I+DH+++KL L +L DN+EIDYLLLPA E+S ++W + S+ P K+H+
Sbjct: 788 IIDHSMNKLATSLDKCYLEDNVEIDYLLLPAIGKGEKSHVNWLAIKSVE-PSSFTCKYHQ 846
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPH-SGQIY-YITGVLGHLNANSLFTRNDGG 325
++TKSG +CTC + +++VCT H G+IY YIT + L+ NS G
Sbjct: 847 PH--------IETKSGLVCTCKLQDALVCTSHPGGKIYFYITTGIMELHGNSPMELRGGE 898
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCR 385
TYKK+YE+ +GIQL F+ + LL R F +NY +Q K E SK ELPPELC
Sbjct: 899 VTTYKKYYEQHHGIQLQFENQWLLKARHHFKVKNYCHGQKQGKDGEASKAFVELPPELCS 958
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKK 445
I+M P+ S Y+F+F+PSIMHRL+SLL A NLK M LDHC QN I T KVLEAITTK+
Sbjct: 959 IVMSPIKDSIIYTFSFIPSIMHRLESLLGAFNLKKMHLDHCTQN-EIQTIKVLEAITTKR 1017
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
C E FH ESLETLGDSFLKYAASQQLFKTY+NHHEGLLSVK+++IISNAALCKLGC L
Sbjct: 1018 CNEAFHYESLETLGDSFLKYAASQQLFKTYKNHHEGLLSVKREKIISNAALCKLGCSSGL 1077
Query: 506 PGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA 565
PGFIR EPFDP W IPGD S +L + + +KIYV G++K+ K +ADVVEALIGA
Sbjct: 1078 PGFIRNEPFDPHAWTIPGDKPESLKLEE-LVIKGKKIYVHGKRKLNRKIIADVVEALIGA 1136
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLV 625
FLSTGGE L+F+D +GIKV F +PYER F +Q E+L+NVR LES L YSF D SLLV
Sbjct: 1137 FLSTGGEISALLFMDWVGIKVSFDKIPYERHFDIQPEKLLNVRFLESQLKYSFHDHSLLV 1196
Query: 626 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
EALTHGSYMLPE+PRCYQRLEFLGD+VLDYLIT +LYN+YP +SPG LTDMR+ASVNNDC
Sbjct: 1197 EALTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNEYPGMSPGQLTDMRAASVNNDC 1256
Query: 686 YALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESL 745
YA S++KHGLHKH+LHASQEL+K I +T+++F++LS STFG+ESE S PK LGDIIESL
Sbjct: 1257 YAWSAIKHGLHKHVLHASQELHKHIAVTLNNFDKLSSSSTFGYESEASPPKVLGDIIESL 1316
Query: 746 SGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRIN 805
+GAI VDSG NKEVV++SIRPLLEP++TPET++L P RELNE CQK + + R +
Sbjct: 1317 AGAILVDSGFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKD 1376
Query: 806 GKAAVTVEVHANGTLFKHTHAD-ADKETAKKVASKEVLKSLK 846
G ++V A+G + ++ + A ++TAKK+A KE+L SLK
Sbjct: 1377 GVTNYRMKVEADGVIHEYEYTGPALRDTAKKIACKEILNSLK 1418
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP TVCSFIQSRGRARM+NSDY+LM+K
Sbjct: 509 FDPCPTVCSFIQSRGRARMRNSDYILMVK 537
>gi|297832974|ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
gi|297330209|gb|EFH60628.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
Length = 2033
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/822 (56%), Positives = 584/822 (71%), Gaps = 14/822 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FD+NK+ G CTLYLP +CP++ V AQ N K LKQT CLEAC +LH++GAL+D+
Sbjct: 1220 YFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAQANNKVLKQTVCLEACIQLHKVGALSDH 1279
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VV E AQK Y+ E P YFPPELV+Q + TYH YLI +K + +
Sbjct: 1280 LVPDMVVAETVAQKLEKIQYNPEQPCYFPPELVSQFSVQPETTYHFYLIRMKPSSQRNFH 1339
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+D++L R LE +I F LE +G + V L ++G LT ++VLLCRRFQI LFRV
Sbjct: 1340 LNDVLLGTRVVLEDDIGNTGFRLEDHKGTIAVTLSYVGAFHLTQEEVLLCRRFQITLFRV 1399
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ----SIDWEPVASLSFPCDIGLKHHK 267
++DH++ L E L GL LRD + +DYLL+P++ IDWE + S++ C L+ H
Sbjct: 1400 LLDHSVKNLMEALNGLLLRDGIALDYLLVPSTHSHETSPIDWEVIRSVNLTCHEALEKHV 1459
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NCS +R++ TK G CTC++ N++V TPH+G Y GVL ++NANS T+ + G
Sbjct: 1460 NCSINGASRILHTKDGLFCTCVVQNALVYTPHNGYFYCTKGVLNNINANSFLTKRNSGDQ 1519
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
TY ++YEER+GIQL F E LLNGR IF NYL +++K++E K ELPPELC +I
Sbjct: 1520 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHNYLHMTKKKKEKEHDKEFVELPPELCHVI 1579
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+TF+PS+M R++SLL+A NLK + V IPT KVLEAITTKKCQ
Sbjct: 1580 LSPISVDVIYSYTFIPSVMQRIESLLIAYNLKK-----SIPKVNIPTIKVLEAITTKKCQ 1634
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA QQLF+ HHEGLLS KKD +ISN LC+ GC KL G
Sbjct: 1635 DQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQG 1694
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + +L R IYV R+ +K K+VADVVE+LIGA+L
Sbjct: 1695 FIRNECFEPKGWMVPGQHSAAYALVNDTLPESRNIYVASRRNLKRKSVADVVESLIGAYL 1754
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L+F++ +GIKVDF ER+ +QAE+LVNV ++ESLLNYSF D SLLVEA
Sbjct: 1755 SEGGELSALMFMNWVGIKVDFTTTKIERESPIQAEKLVNVGYMESLLNYSFEDKSLLVEA 1814
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LSPG LTDMRSASVNN+CYA
Sbjct: 1815 LTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYA 1874
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
L +VK LHKHILHAS L+K I+ TV FE+ SL+STFGWE + SFPK LGD+IESL+G
Sbjct: 1875 LVAVKENLHKHILHASHVLHKHISRTVSEFEQSSLQSTFGWECDISFPKVLGDVIESLAG 1934
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SI+PLL MITPET++L P REL E CQK F + K A N
Sbjct: 1935 AIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKSQFELSK--AKDFN-- 1990
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
TVEV A F HT +DK+ AKK+A KEVL LK S
Sbjct: 1991 -YFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKKSL 2031
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP+ +CSFIQSRGRARMQNSDYL+M++
Sbjct: 1118 FDPASNICSFIQSRGRARMQNSDYLMMVE 1146
>gi|357448551|ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
gi|355483599|gb|AES64802.1| Endoribonuclease Dicer [Medicago truncatula]
Length = 1418
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/822 (56%), Positives = 596/822 (72%), Gaps = 26/822 (3%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKPTP +D K GI LYLP +CPI + QG+ K LK ACLEACK+LH+IGALTDN
Sbjct: 614 YFKPTPMWD--KHKGI--LYLPKSCPIHAIHVQGDNKFLKNIACLEACKQLHKIGALTDN 669
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+P +VVEE + ++ GNEPY E P Y P ELVN ++ Y+CYLIELKQNF+YDI
Sbjct: 670 LVPSIVVEEAEVEEFGNEPYSEEQPSYVPFELVNHMSNNSSTIYYCYLIELKQNFSYDIT 729
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
DI LA R EL+ EI + FD+ DRG L VNL++ G I L+PD+VLLC+RFQ+++ +
Sbjct: 730 VQDIFLATRVELDPEIGCMQFDMCFDRGSLAVNLRYRGNINLSPDQVLLCKRFQVSILGI 789
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPA----SEQSIDWEPVASLSFPCDIGLKHHK 267
+M+ +DK + L D+LEIDYLLLP+ S+DW ++S+ P I ++H
Sbjct: 790 LMNSKMDK-ESFSEKYSLEDDLEIDYLLLPSIAIEETPSVDWLTISSIH-PSKIQCRYH- 846
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
A + T+ G C C++ N+++CTPH+G+ Y G++ L+ NS DG
Sbjct: 847 -------AANILTEKGFACGCILRNALICTPHNGRTYITAGMM-ELDGNSPLEVGDGEVT 898
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQR--EPSKISFELPPELCR 385
TYKK++ +++GIQL F+ + LL R +F +NY Q K R SK ELPPELC
Sbjct: 899 TYKKYFGQKHGIQLRFEHQRLLKARHVFPVKNYCHGYSQAKDRGLNVSKTFVELPPELCS 958
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKK 445
IIM P+ LST Y+F+F+PSIMHRL+SLL A N K M LD+C QN I T KVLEA+TTK
Sbjct: 959 IIMSPVPLSTLYTFSFIPSIMHRLESLLGAYNFKRMHLDYCPQN-KIQTFKVLEAMTTKS 1017
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
C+E FH ESLETLGDSFLKYA SQQLF YQNHHEGLLSVK+++II NAAL KLGCD +L
Sbjct: 1018 CKETFHYESLETLGDSFLKYAVSQQLFNMYQNHHEGLLSVKREKIICNAALSKLGCDFRL 1077
Query: 506 PGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA 565
PGFIR +PFDPK W+IPG S S++L + ++FN RKIY G +K+K K VADVVEALIGA
Sbjct: 1078 PGFIRNDPFDPKTWIIPGVKSESFKL-EETVFNGRKIYTRGDRKLKRKVVADVVEALIGA 1136
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLV 625
FLS GGE L+F+D IGIKV+F +PYERQF + LVNVR LESLL YSFRD SLLV
Sbjct: 1137 FLSAGGEMAALLFMDWIGIKVNFNIIPYERQFIACPDNLVNVRFLESLLKYSFRDRSLLV 1196
Query: 626 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
EALTHGSYMLP++PRCYQRLE+LGD+VLDYLIT++LY YP +SPG LTDMRSASVNNDC
Sbjct: 1197 EALTHGSYMLPDVPRCYQRLEYLGDSVLDYLITMHLYRVYPGMSPGQLTDMRSASVNNDC 1256
Query: 686 YALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESL 745
YA+S++K LHKH+LHASQEL+K I T+D F+ S S+FGWESE +FPK LGDIIESL
Sbjct: 1257 YAMSAIKVQLHKHVLHASQELHKHIVATLDKFDDQS-SSSFGWESEATFPKVLGDIIESL 1315
Query: 746 SGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRIN 805
+GAIFVDSG +KE V++SIRPLLEP++TP+T+ + P RELNE CQK +++ +KT++ R +
Sbjct: 1316 AGAIFVDSGYDKEAVWKSIRPLLEPLVTPDTLTIHPIRELNELCQKMNYTKEKTLS-RND 1374
Query: 806 GKAAVTVEVHANGTLFKHTH-ADADKETAKKVASKEVLKSLK 846
G + +EV A+G + + + DK+TA ++A K VL SL+
Sbjct: 1375 GVTSCKIEVIADGVIHQFEYKGSTDKKTATRLACKGVLHSLQ 1416
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 28/29 (96%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDPS TVCSF+QSRGRARM+NSDY+LM+K
Sbjct: 511 FDPSPTVCSFVQSRGRARMRNSDYILMVK 539
>gi|145331748|ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640404|gb|AEE73925.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1374
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/822 (55%), Positives = 585/822 (71%), Gaps = 14/822 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FD+NK+ G CTLYLP +CP++ V A+ N K LKQ CL+AC +LH++GAL+D+
Sbjct: 561 YFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDH 620
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VV E +QK Y+ E P YFPPELV+Q + TYH YLI +K N +
Sbjct: 621 LVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFH 680
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+D++L R LE +I +F LE RG + V L ++G LT ++VL CRRFQI LFRV
Sbjct: 681 LNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRV 740
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS----IDWEPVASLSFPCDIGLKHHK 267
++DH+++ L E L GL LRD + +DYLL+P++ IDWE + S++ L+ H+
Sbjct: 741 LLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHE 800
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NCST +R++ TK G CTC++ N++V TPH+G +Y GVL +LN NSL T+ + G
Sbjct: 801 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 860
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
TY ++YEER+GIQL F E LLNGR IF +YL +++K++E + ELPPELC +I
Sbjct: 861 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVI 920
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+TF+PS+M R++SLL+A NLK + V IPT KVLEAITTKKC+
Sbjct: 921 LSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPKVNIPTIKVLEAITTKKCE 975
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA QQLF+ HHEGLLS KKD +ISN LC+ GC KL G
Sbjct: 976 DQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQG 1035
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + +L R IYV R+ +K K+VADVVE+LIGA+L
Sbjct: 1036 FIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRNLKRKSVADVVESLIGAYL 1095
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L+F++ +GIKVDF +R +QAE+LVNV ++ESLLNYSF D SLLVEA
Sbjct: 1096 SEGGELAALMFMNWVGIKVDFTTTKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEA 1155
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LSPG LTDMRSASVNN+CYA
Sbjct: 1156 LTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYA 1215
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
L +VK LHKHIL+AS L+K I+ TV FE+ SL+STFGWES+ SFPK LGD+IESL+G
Sbjct: 1216 LVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAG 1275
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SI+PLL MITPET++L P REL E CQK F + K
Sbjct: 1276 AIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKA-----KDF 1330
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+ TVEV A F HT +DK+ AKK+A KEVL LK S
Sbjct: 1331 DSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 1372
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP+ +CSFIQSRGRARMQNSDYL+M++
Sbjct: 459 FDPASNICSFIQSRGRARMQNSDYLMMVE 487
>gi|145338056|ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
gi|334185051|ref|NP_001189798.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName: Full=Endoribonuclease Dicer homolog 2; AltName:
Full=Dicer-like protein 2; Short=AtDCL2
gi|332640403|gb|AEE73924.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640405|gb|AEE73926.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1388
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/822 (55%), Positives = 585/822 (71%), Gaps = 14/822 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FD+NK+ G CTLYLP +CP++ V A+ N K LKQ CL+AC +LH++GAL+D+
Sbjct: 575 YFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDH 634
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VV E +QK Y+ E P YFPPELV+Q + TYH YLI +K N +
Sbjct: 635 LVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFH 694
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+D++L R LE +I +F LE RG + V L ++G LT ++VL CRRFQI LFRV
Sbjct: 695 LNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRV 754
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS----IDWEPVASLSFPCDIGLKHHK 267
++DH+++ L E L GL LRD + +DYLL+P++ IDWE + S++ L+ H+
Sbjct: 755 LLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHE 814
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NCST +R++ TK G CTC++ N++V TPH+G +Y GVL +LN NSL T+ + G
Sbjct: 815 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 874
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
TY ++YEER+GIQL F E LLNGR IF +YL +++K++E + ELPPELC +I
Sbjct: 875 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVI 934
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+TF+PS+M R++SLL+A NLK + V IPT KVLEAITTKKC+
Sbjct: 935 LSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPKVNIPTIKVLEAITTKKCE 989
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA QQLF+ HHEGLLS KKD +ISN LC+ GC KL G
Sbjct: 990 DQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQG 1049
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + +L R IYV R+ +K K+VADVVE+LIGA+L
Sbjct: 1050 FIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRNLKRKSVADVVESLIGAYL 1109
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L+F++ +GIKVDF +R +QAE+LVNV ++ESLLNYSF D SLLVEA
Sbjct: 1110 SEGGELAALMFMNWVGIKVDFTTTKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEA 1169
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LSPG LTDMRSASVNN+CYA
Sbjct: 1170 LTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYA 1229
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
L +VK LHKHIL+AS L+K I+ TV FE+ SL+STFGWES+ SFPK LGD+IESL+G
Sbjct: 1230 LVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAG 1289
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SI+PLL MITPET++L P REL E CQK F + K
Sbjct: 1290 AIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKA-----KDF 1344
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+ TVEV A F HT +DK+ AKK+A KEVL LK S
Sbjct: 1345 DSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 1386
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP+ +CSFIQSRGRARMQNSDYL+M++
Sbjct: 473 FDPASNICSFIQSRGRARMQNSDYLMMVE 501
>gi|6714410|gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
Length = 2042
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/822 (55%), Positives = 585/822 (71%), Gaps = 14/822 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FD+NK+ G CTLYLP +CP++ V A+ N K LKQ CL+AC +LH++GAL+D+
Sbjct: 1229 YFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDH 1288
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VV E +QK Y+ E P YFPPELV+Q + TYH YLI +K N +
Sbjct: 1289 LVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFH 1348
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+D++L R LE +I +F LE RG + V L ++G LT ++VL CRRFQI LFRV
Sbjct: 1349 LNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRV 1408
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS----IDWEPVASLSFPCDIGLKHHK 267
++DH+++ L E L GL LRD + +DYLL+P++ IDWE + S++ L+ H+
Sbjct: 1409 LLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHE 1468
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NCST +R++ TK G CTC++ N++V TPH+G +Y GVL +LN NSL T+ + G
Sbjct: 1469 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 1528
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
TY ++YEER+GIQL F E LLNGR IF +YL +++K++E + ELPPELC +I
Sbjct: 1529 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVI 1588
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+TF+PS+M R++SLL+A NLK + V IPT KVLEAITTKKC+
Sbjct: 1589 LSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPKVNIPTIKVLEAITTKKCE 1643
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA QQLF+ HHEGLLS KKD +ISN LC+ GC KL G
Sbjct: 1644 DQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQG 1703
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + +L R IYV R+ +K K+VADVVE+LIGA+L
Sbjct: 1704 FIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRNLKRKSVADVVESLIGAYL 1763
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L+F++ +GIKVDF +R +QAE+LVNV ++ESLLNYSF D SLLVEA
Sbjct: 1764 SEGGELAALMFMNWVGIKVDFTTTKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEA 1823
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LSPG LTDMRSASVNN+CYA
Sbjct: 1824 LTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYA 1883
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
L +VK LHKHIL+AS L+K I+ TV FE+ SL+STFGWES+ SFPK LGD+IESL+G
Sbjct: 1884 LVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAG 1943
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SI+PLL MITPET++L P REL E CQK F + K
Sbjct: 1944 AIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKA-----KDF 1998
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+ TVEV A F HT +DK+ AKK+A KEVL LK S
Sbjct: 1999 DSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 2040
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP+ +CSFIQSRGRARMQNSDYL+M++
Sbjct: 1127 FDPASNICSFIQSRGRARMQNSDYLMMVE 1155
>gi|94450856|gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
Length = 1374
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/822 (55%), Positives = 585/822 (71%), Gaps = 14/822 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FD+NK+ G CTLYLP +CP++ V A+ N K LKQ CL+AC +LH++GAL+D+
Sbjct: 561 YFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDH 620
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VV E +QK Y+ E P YFPPELV+Q + TYH YLI +K N ++
Sbjct: 621 LVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNLH 680
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+D++L R LE +I +F LE RG + V L ++G LT ++VL CRRFQI LFRV
Sbjct: 681 LNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTREEVLFCRRFQITLFRV 740
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS----IDWEPVASLSFPCDIGLKHHK 267
++DH+++ L E L GL LRD + +DYLL+P++ IDWE + S++ L+ H+
Sbjct: 741 LLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHE 800
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NCST +R++ TK G CTC++ N++V TPH+G +Y GVL +LN NSL T+ + G
Sbjct: 801 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 860
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
TY ++YEER+GIQL F E LLNGR IF +YL +++K++E + ELPPELC +I
Sbjct: 861 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVI 920
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+TF+PS+M R++SLL+A NLK + V IPT KVLEAITTKKC+
Sbjct: 921 LSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPKVNIPTIKVLEAITTKKCE 975
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA QQLF+ HHEGLLS KKD +ISN LC+ GC KL G
Sbjct: 976 DQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQG 1035
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + +L R IYV R+ +K K+VADVVE+LIGA+L
Sbjct: 1036 FIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRNLKRKSVADVVESLIGAYL 1095
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L+F++ +GIKVD +R +QAE+LVNV ++ESLLNYSF D SLLVEA
Sbjct: 1096 SEGGELAALMFMNWVGIKVDLTTTKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEA 1155
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LSPG LTDMRSASVNN+CYA
Sbjct: 1156 LTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYA 1215
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
L +VK LHKHIL+AS L+K I+ TV FE+ SL+STFGWES+ SFPK LGD+IESL+G
Sbjct: 1216 LVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAG 1275
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SI+PLL MITPET++L P REL E CQK F + K
Sbjct: 1276 AIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKA-----KDF 1330
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+ TVEV A F HT +DK+ AKK+A KEVL LK S
Sbjct: 1331 DSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 1372
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP+ +CSFIQSRGRARMQNSDYL+M++
Sbjct: 459 FDPASNICSFIQSRGRARMQNSDYLMMVE 487
>gi|94450854|gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
Length = 1386
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/822 (55%), Positives = 585/822 (71%), Gaps = 14/822 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FD+NK+ G CTLYLP +CP++ V A+ N K LKQ CL+AC +LH++GAL+D+
Sbjct: 573 YFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDH 632
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VV E +QK Y+ E P YFPPELV+Q + TYH YLI +K N ++
Sbjct: 633 LVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNLH 692
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+D++L R LE +I +F LE RG + V L ++G LT ++VL CRRFQI LFRV
Sbjct: 693 LNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTREEVLFCRRFQITLFRV 752
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS----IDWEPVASLSFPCDIGLKHHK 267
++DH+++ L E L GL LRD + +DYLL+P++ IDWE + S++ L+ H+
Sbjct: 753 LLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHE 812
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NCST +R++ TK G CTC++ N++V TPH+G +Y GVL +LN NSL T+ + G
Sbjct: 813 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 872
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
TY ++YEER+GIQL F E LLNGR IF +YL +++K++E + ELPPELC +I
Sbjct: 873 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVI 932
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+TF+PS+M R++SLL+A NLK + V IPT KVLEAITTKKC+
Sbjct: 933 LSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPKVNIPTIKVLEAITTKKCE 987
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA QQLF+ HHEGLLS KKD +ISN LC+ GC KL G
Sbjct: 988 DQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQG 1047
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + +L R IYV R+ +K K+VADVVE+LIGA+L
Sbjct: 1048 FIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRNLKRKSVADVVESLIGAYL 1107
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L+F++ +GIKVD +R +QAE+LVNV ++ESLLNYSF D SLLVEA
Sbjct: 1108 SEGGELAALMFMNWVGIKVDLTTTKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEA 1167
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LSPG LTDMRSASVNN+CYA
Sbjct: 1168 LTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYA 1227
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
L +VK LHKHIL+AS L+K I+ TV FE+ SL+STFGWES+ SFPK LGD+IESL+G
Sbjct: 1228 LVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAG 1287
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SI+PLL MITPET++L P REL E CQK F + K
Sbjct: 1288 AIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKA-----KDF 1342
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+ TVEV A F HT +DK+ AKK+A KEVL LK S
Sbjct: 1343 DSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 1384
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP+ +CSFIQSRGRARMQNSDYL+M++
Sbjct: 471 FDPASNICSFIQSRGRARMQNSDYLMMVE 499
>gi|189908862|gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
Length = 1392
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/823 (54%), Positives = 581/823 (70%), Gaps = 11/823 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FDI+++ G CTLYLP +C ++ V Q N LKQTACL+AC +LH+ GALTD+
Sbjct: 574 YFKPAPRFDIDEDQGKCTLYLPKSCQVKEVRVQANRNVLKQTACLKACIQLHKAGALTDH 633
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+V++E QK G YD E YFPPELV+Q ++ TYH Y I +K F ++
Sbjct: 634 LVPDMVLKETVQQKLGKIHYDPEQSSYFPPELVSQFSAHSQTTYHFYSIRMKSEFPRNLH 693
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+DI+L R ELE++I F LE G + V L ++G LT ++VLLCRRFQI LFRV
Sbjct: 694 FNDILLGTRVELEADIGNTCFRLEDHLGTIGVTLSYVGAFDLTQNEVLLCRRFQITLFRV 753
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS----IDWEPVASLSFPCDIGLKHHK 267
++DH+++ L L GL LRD + +DYLL+P++ + IDW + S++ + + H
Sbjct: 754 LLDHSVENLAAALDGLHLRDGVALDYLLVPSTHEQKASLIDWGVLRSVNLTSNRPRERHV 813
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
+CS + ++ TK G CTC++ N++V TPH+G +Y G+L HL+ANS+ T+ G +
Sbjct: 814 DCSAKDASCILHTKDGLFCTCVLQNALVYTPHNGYVYCTRGILSHLHANSILTKRKSGDV 873
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
+Y ++YE+R+ I+L F E LLNGR IF N+L R++K++E + ELPPELC +I
Sbjct: 874 SYMEYYEKRHEIRLNFVDEPLLNGRHIFTLHNHLHMTRKKKEKEHDREFVELPPELCHVI 933
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+ F+PS+M R++SLL+A NLK + V IPT KVLEAITTKKCQ
Sbjct: 934 LSPISVDMIYSYKFMPSVMQRIESLLIAFNLKK-----SIPTVNIPTIKVLEAITTKKCQ 988
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA Q LF++Y HHEGLLS KD +ISN LCK GC+ KL G
Sbjct: 989 DQFHLESLETLGDSFLKYAVCQHLFQSYDTHHEGLLSTIKDEMISNVTLCKFGCNQKLQG 1048
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + L R +Y+ R +K K+VADVVEALIGA+L
Sbjct: 1049 FIRNECFEPKGWMVPGQSSAAYALVNDYLSESRNMYIARRMNLKRKSVADVVEALIGAYL 1108
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L F++ +GIKVDF +R+ +QAE+LVNVR++ESLLNY F+D SLLVEA
Sbjct: 1109 SEGGELAALTFMNWVGIKVDFTTTMIQREPSIQAEKLVNVRYMESLLNYKFKDKSLLVEA 1168
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY +YP LSPG LTDMRSASVNN+CYA
Sbjct: 1169 LTHGSYMIPEIPRCYQRLEFLGDSVLDYLITKHLYGEYPNLSPGLLTDMRSASVNNECYA 1228
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERL-SLESTFGWESETSFPKALGDIIESLS 746
+VK LHKH+LHAS +L+K I+ TV FERL S++S+FGWESE +FPK LGD+IESL+
Sbjct: 1229 QVAVKSNLHKHVLHASHDLHKHISRTVSEFERLSSVQSSFGWESEIAFPKVLGDVIESLA 1288
Query: 747 GAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRING 806
GAI VDSG NKEVVF I+PLL MITPET++L P REL E CQK F + K V NG
Sbjct: 1289 GAIHVDSGYNKEVVFACIKPLLGCMITPETVKLHPVRELTELCQKAQFELSK-VKGFENG 1347
Query: 807 KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+A VEV A F HT DK+ AKK+A KEVL SLK S
Sbjct: 1348 EAFFPVEVEAKEMSFAHTARAFDKKMAKKLAYKEVLNSLKKSL 1390
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDP+ +CSFIQS+GRARM NSDYL+M++R
Sbjct: 472 FDPASNICSFIQSQGRARMPNSDYLMMVER 501
>gi|379987678|gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/826 (53%), Positives = 592/826 (71%), Gaps = 14/826 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIA-QGNIKTLKQTACLEACKKLHQIGALTD 90
Y+KP+P+ I KE CTLYLP NCP+Q VI+ +GN K LKQ ACLEACK+LH+ GALTD
Sbjct: 575 YYKPSPRCAIEKETETCTLYLPKNCPLQKVISVKGNTKILKQLACLEACKELHREGALTD 634
Query: 91 NLLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDI 150
NL+PD+V EE ++ G + Y E YFPPELV+ C DT+ Y+CY ++L+ +
Sbjct: 635 NLVPDIVEEEAIIKELGCQIYTDEELKYFPPELVSHCANDTEAVYYCYEVDLQHDSYSSY 694
Query: 151 PAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR 210
I+LAVRT L+ + +++ FDL+VD+G L V + + G ++LT ++VL C+RFQ++LFR
Sbjct: 695 QLCGIILAVRTRLKFDDERLTFDLDVDKGSLLVQVNYSGVVRLTSEEVLRCQRFQVSLFR 754
Query: 211 VIMDHNLDKLNEILKGLWLRDNLEI-DYLLLPA--SEQS--IDWEPVASLSFPCDI-GLK 264
+++D +L KL + L + L + DYLLLP+ S Q+ I+WE V S+ FP + G K
Sbjct: 755 ILLDRDLSKLEDALAAVQLPVGSAVSDYLLLPSLGSTQNPQINWECVNSVLFPSQVLGDK 814
Query: 265 HHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG 324
H CST R V TK+G +C+CM+ NS+VCTPH+G +Y ITG L +L+ NSL + G
Sbjct: 815 HIDCCSTQGRKRSVNTKTGVVCSCMLENSLVCTPHNGYVYCITGFLDNLDCNSLLEQRTG 874
Query: 325 GAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELC 384
+ITY ++Y++R+ I LCFD E LL G+ IF NYL +CR +K ++ ++ S ELPPELC
Sbjct: 875 ESITYIEYYKKRHRINLCFDGEQLLRGKHIFKVHNYLQRCRSQKAKDSTESSVELPPELC 934
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKVLEAITT 443
IIM P+S+ST ++++++PS+MHR++SL++A NLK M C Q + + + +
Sbjct: 935 SIIMSPVSISTLFTYSYLPSVMHRVESLIMASNLKRMHSYQCTQKHFLFQPLRFWKQLQQ 994
Query: 444 KKCQEGF---HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
+ + F HL LETL + L+ + +L K HHEGLL+VKK++IISNAALCKLG
Sbjct: 995 RNASKSFIWNHLRHLETLFSNMLRVYSCSRLMKI---HHEGLLTVKKNKIISNAALCKLG 1051
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
C K+PGFIR+EPFD K W+IPGDNS ++ L K+Y GR+K+KSK VADVVE
Sbjct: 1052 CARKIPGFIRSEPFDLKGWLIPGDNSQVQNFDEELLMPSVKMYSRGRQKIKSKRVADVVE 1111
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRD 620
ALIGAFLS+GGE L F+ +G+ +DFV+ P R F + AE+LVNVR+LESLL+Y F D
Sbjct: 1112 ALIGAFLSSGGEVAALSFMKWLGVDIDFVDAPTPRHFPMNAEKLVNVRYLESLLDYKFHD 1171
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY +T +LY KYP LSPG +TD+RSAS
Sbjct: 1172 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSAS 1231
Query: 681 VNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGD 740
VNN+CYA ++VK GLHKHILHASQ+L + I TV +FE+L STFGWESET+FPK LGD
Sbjct: 1232 VNNECYAQAAVKAGLHKHILHASQDLQRQIVNTVLNFEKLDPASTFGWESETTFPKVLGD 1291
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTV 800
+IESL+GAIFVDSG NK+VVF+S+R LLEP+ITP+T++L P REL+E C + + KK V
Sbjct: 1292 VIESLAGAIFVDSGFNKDVVFQSVRTLLEPLITPDTVKLHPVRELSELCDQKGYIKKKNV 1351
Query: 801 APRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
R NG A +TVEV A+G K T ++ DK+ A+KVA K VLK LK
Sbjct: 1352 VSRENGVAYITVEVEADGVSHKFTCSERDKKMAEKVACKNVLKLLK 1397
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLML 29
FDPS TVCSFIQSRGRARMQNS ++LM+
Sbjct: 472 FDPSATVCSFIQSRGRARMQNSHFILMV 499
>gi|218193216|gb|EEC75643.1| hypothetical protein OsI_12390 [Oryza sativa Indica Group]
Length = 1318
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/905 (42%), Positives = 545/905 (60%), Gaps = 62/905 (6%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR------------------------------ 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 417 FDPSATVCSFIQSRGRARMENSDYLLLIGRHVFNFVALGDVEAHTNAKKFLASGQIMREE 476
Query: 32 ----------------YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTAC 75
YFKP P+FDI+K G CTL+LP + P+QTV +G LK+T C
Sbjct: 477 SLRLGSISCQPLENTLYFKPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVC 536
Query: 76 LEACKKLHQIGALTDNLLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTK 132
L+AC++LH IGALTD+LLP++ V EE D E P YFP E V+ ++
Sbjct: 537 LKACQELHAIGALTDSLLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSR 592
Query: 133 I-TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKI 191
+ Y+CY I L+ P DI+LA++ +L S+ +F L + +V +K++G I
Sbjct: 593 LGIYYCYKISLEGCPKTASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGII 651
Query: 192 QLTPDKVLLCRRFQIALFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWE 250
L ++V++ RRFQ + +I D +L+ N I ++ + + YLLLP IDW
Sbjct: 652 HLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWC 711
Query: 251 PVASLSFPC-DIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGV 309
+ S P + KH +C + + ++QTK GP C C++ NS+VCTPH+ Y I+G
Sbjct: 712 SMKFSSSPIYEANNKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGF 771
Query: 310 LGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQ 369
L L+ANS ++DG +TYK +++ R+G+ L F+ + LL G + A+N+L C +K+
Sbjct: 772 LD-LDANSCLPQHDGIVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKARNFLHNCYSKKE 830
Query: 370 REPS-KISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ 428
+EP + S ELPPELCRIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q
Sbjct: 831 KEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQ 889
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
+P K+LEA+TTKKCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K
Sbjct: 890 QFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKK 949
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRK 548
+ISNAALC+L C L G+I E F+P+ W+IP + + S +Y +
Sbjct: 950 NLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERDNKKISFLAPNGMYSQRKM 1009
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNV 607
+KSK +AD VEALIGA+LST GE + + +G+ ++F +P ER+ ++AE +NV
Sbjct: 1010 SIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFINV 1069
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
R LE +L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP
Sbjct: 1070 RSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPD 1129
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG 727
+P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL++ ++ ++ F + ++G
Sbjct: 1130 CTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYG 1189
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
WE+ PK LGD+IES++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L E
Sbjct: 1190 WEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQE 1249
Query: 788 YCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+C + F + ++G ++V V A T + T + K AKK+ASK VLK L A
Sbjct: 1250 FCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKAVLKDLIA 1308
Query: 848 SFPGT 852
T
Sbjct: 1309 GHKDT 1313
>gi|356571230|ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 756
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/759 (49%), Positives = 497/759 (65%), Gaps = 31/759 (4%)
Query: 109 EPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEI- 167
E + +P Y P ELV+ + +TYHCYL+EL+Q++ Y + +DIVLA+R+EL+SEI
Sbjct: 2 EGFGNAYPSYVPSELVSCSSKGRNVTYHCYLMELEQHYEYQVSVNDIVLAIRSELDSEIV 61
Query: 168 ---KKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEIL 224
+FD V RG+L VNL+HL IQL+P+KV CRRFQ LFR++++ ++ KL +
Sbjct: 62 DTLSGTSFD--VKRGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVS 119
Query: 225 KGLWLRDNLEIDYLLLPA-------SEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARV 277
L DN EID+LLLPA S IDW+PV S+ F + C +A
Sbjct: 120 DDFSLGDNPEIDFLLLPATVKHQRPSNSIIDWKPVLSVPFSSE------STCDCKDHACN 173
Query: 278 VQTKSGPLCTCMIYNSVVCTPHSGQIY--YITGVLGHLNANSLFTRNDGGAITYKKHYEE 335
V+ ++ +C+C + N VV TPH+G IY Y T LN NS + G TYK+H+++
Sbjct: 174 VRIRNDSVCSCKLENCVVYTPHNGSIYIIYTTDGTKKLNGNSTLNQGLKGITTYKEHFKK 233
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLST 395
R+GI+L F+ + LL+GR +F +NYL K RQ+ ++ + S +LPPE+C +IM P+S+ T
Sbjct: 234 RHGIELGFEHQSLLHGRNLFKVENYLLKTRQKTEKGKNMSSVDLPPEVCSVIMSPISIGT 293
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESL 455
YSF+F+PSIMH L+ LL+A NLK MLLDH N IP SKVL+AIT K C+E + + L
Sbjct: 294 IYSFSFIPSIMHWLEGLLVAFNLKRMLLDHFTPN-DIPISKVLQAITAKGCEEAYDYDYL 352
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
ETLGDS+LKY SQQLFKT QN EG LS K+ IISN L K GC LPGFIR + FD
Sbjct: 353 ETLGDSYLKYIVSQQLFKTNQNDREGALSDKRKNIISNDVLFKYGCTRPLPGFIRKDKFD 412
Query: 516 PKMWMIPGDNSGSYELNDHSLFNER-KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENV 574
PK W +PGD S S L L + R ++YV +++ +ADVVEALIGAF+ST E
Sbjct: 413 PKQWDVPGDKSNSILLLKQKLDSSRTRVYVRKTREIDLGIIADVVEALIGAFISTEDEKA 472
Query: 575 GLIFLDRIGIKVDFVNVPYERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHG 631
L F++ IGI VD +PYE + + E LV + L+S LNYSF+DP LLVEALTH
Sbjct: 473 ALSFINWIGINVDTNIMPYENERHISIIAPEELVKAKLLKSRLNYSFKDPYLLVEALTHS 532
Query: 632 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT--LSPGDLTDMRSASVNNDCYALS 689
S PEI CY+RLEFLGDAVLDY+IT++ Y +Y S T+MRS SVNN+CYALS
Sbjct: 533 SGKRPEIRTCYERLEFLGDAVLDYVITMHFYKEYSNDKFSAEFFTNMRSISVNNECYALS 592
Query: 690 SVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAI 749
++K L +HIL S + I T++ + LSLESTFGWE ET F + L D+IES++GAI
Sbjct: 593 AIKAKLDEHILCDSV-VKNNIAQTMEGVKNLSLESTFGWELETYFCQVLADVIESIAGAI 651
Query: 750 FVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAA 809
FVDSG KEVVF+SI+PLLEP++TPET R P EL+E CQK + MK R+NG+ +
Sbjct: 652 FVDSGYKKEVVFQSIKPLLEPLVTPETARRHPISELHELCQKKGYKMKVYPPVRVNGETS 711
Query: 810 VTVEVHANGTLFKHT--HADADKETAKKVASKEVLKSLK 846
VT+EV NG +K+ ++ +TA+K+A+K+VLK +K
Sbjct: 712 VTIEVKTNGITYKNNPPAKASNNDTARKLAAKDVLKQIK 750
>gi|222625282|gb|EEE59414.1| hypothetical protein OsJ_11564 [Oryza sativa Japonica Group]
Length = 1371
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/901 (42%), Positives = 545/901 (60%), Gaps = 66/901 (7%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR------------------------------ 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 482 FDPSATVCSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSIS 541
Query: 32 --------YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLH 83
YF P P+FDI+K G CTL+LP + P+QTV +G LK+T CL+AC++LH
Sbjct: 542 CQPLENTLYFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELH 601
Query: 84 QIGALTDNLLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TYHCYL 139
IGALTD+LLP++ V EE D E P YFP E V+ +++ Y+CY
Sbjct: 602 AIGALTDSLLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLGIYYCYK 657
Query: 140 IELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVL 199
I L+ P DI+LA++ +L S+ +F L + +V +K++G I L ++V+
Sbjct: 658 ISLEGCPKTASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVI 716
Query: 200 LCRRFQIALFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFP 258
+ RRFQ + +I D +L+ N I ++ + + YLLLP IDW + S P
Sbjct: 717 IARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKFSSSP 776
Query: 259 C-DIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANS 317
+ KH +C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L L+ANS
Sbjct: 777 IYEANNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-LDANS 835
Query: 318 LFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPS-KIS 376
++DG +TYK +++ R+G+ L F+ + LL G + +N+L C +K++EP + S
Sbjct: 836 RLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCYSKKEKEPGDRYS 895
Query: 377 FELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK 436
ELPPELCRIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q +P K
Sbjct: 896 VELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQFDVPVLK 954
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LEA+TTKKCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +ISNAAL
Sbjct: 955 ILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAAL 1014
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPG---DNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
C+L C L G+I E F+P+ W+IP D G+ ++ S +Y + +KSK
Sbjct: 1015 CQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI---SFLAPNGMYSQRKMSIKSK 1071
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLES 612
+AD VEALIGA+LST GE + + +G+ ++F +P ER+ ++AE +NVR LE
Sbjct: 1072 RIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFINVRSLEG 1131
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
+L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP +P
Sbjct: 1132 MLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPEL 1191
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-DSFERLSLESTFGWESE 731
LTD+RSASVNN+CYA ++VK GL+KHILH+S EL++ ++ + SF S +GWE+
Sbjct: 1192 LTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGPS----YGWEAG 1247
Query: 732 TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQK 791
PK LGD+IES++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L E+C +
Sbjct: 1248 IGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDR 1307
Query: 792 HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
F + ++G ++V V A T + T + K AKK+ASK VLK L A
Sbjct: 1308 RSFKITYE-KNHVDGVSSVIARVKAGETTYSATKSGPCK-LAKKLASKAVLKDLIAGHKD 1365
Query: 852 T 852
T
Sbjct: 1366 T 1366
>gi|357115872|ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a-like [Brachypodium
distachyon]
Length = 1402
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/826 (43%), Positives = 524/826 (63%), Gaps = 27/826 (3%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+F INK CTLYLP + P+QTV +G + LK+ CL+AC++LH IGALTD+
Sbjct: 577 YFKPLPRFSINKASCTCTLYLPKSSPVQTVSTEGEVDVLKKEVCLKACRELHAIGALTDS 636
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TYHCYLIELKQNFNYDI 150
LLP++ + E Y E P YFP ELV+ + + Y CY+I L+
Sbjct: 637 LLPELGFPCEEEPDIVVEKYQHEQPAYFPEELVDNWLSFSCLGIYICYMISLEGFLQTTA 696
Query: 151 PAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR 210
P DI+LA++ ++ S+ +F L + +TV +K++G I L ++V++ RRFQ ++
Sbjct: 697 PT-DIILAMKCDMGSDFVSRSFKLYGTQDYVTVAIKYMGIIHLNQEQVIIARRFQTSILS 755
Query: 211 VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCS 270
+++++ + E ++ ++ I YLLLP IDW S P ++ K ++C
Sbjct: 756 LLINNAIKYYYE------MQRSIGIVYLLLPLVSGKIDW-CTMKFSAPQEVNNKDVRHCH 808
Query: 271 TMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYK 330
+ ++QTK G LC CM+ NS++CTPH+ ++Y ITG L LNA SL DG +TY
Sbjct: 809 SCKEVDLLQTKDGLLCRCMLRNSIICTPHNSRLYAITGFLD-LNAKSLLHLRDGSILTYI 867
Query: 331 KHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISF--ELPPELCRIIM 388
+++ R+G++L + + LL ++ +N+L K R K + S SF ELPPELCR++M
Sbjct: 868 TYFKTRHGLRLTNENQPLLAASKLGQVRNFLHK-RNYKNEKVSSSSFAVELPPELCRVVM 926
Query: 389 GPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQE 448
P+ YSF+ +PS+M+R+ +LL+ LK + L MQ ++P K+LEA+TTK+CQE
Sbjct: 927 SPVPADILYSFSIIPSVMYRIHGMLLSAKLK-VQLGPRMQQFSVPDLKILEALTTKECQE 985
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
F ESLETLGDSFLKY +Q L+ Y+ HHEG L+ K +ISNAALC+L C++ L G+
Sbjct: 986 EFSQESLETLGDSFLKYVTTQHLYTKYKLHHEGTLTKMKKNLISNAALCQLACNNNLVGY 1045
Query: 509 IRTEPFDPKMWMIPG---DNSG--SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALI 563
I+ E F+PK W IPG D G S+ L+ + +++ RKI +KSK +AD VEALI
Sbjct: 1046 IQGEVFNPKGWFIPGLGYDTCGNKSFCLSSNGMYSLRKI------SIKSKRIADTVEALI 1099
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPS 622
GA+LS GE +F++ +G+ + F +P ER ++ E +N+R LE +L Y+F+DP
Sbjct: 1100 GAYLSAAGEQAAFLFINSLGMDIGFHSEIPIERNIVIKPEEFINIRSLEIILGYNFKDPL 1159
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
LL+EALTHGSY + CYQRLEFLGDAVLD+L+TVY YN YP +P LTD+RSASVN
Sbjct: 1160 LLIEALTHGSYQIAGPTACYQRLEFLGDAVLDHLVTVYYYNTYPECTPALLTDLRSASVN 1219
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDII 742
N+CYA +SVK GL+KHILH+S EL++ + +++F + + GWE+ PK LGD+I
Sbjct: 1220 NNCYAHASVKAGLNKHILHSSTELHRKMAYYLENFGQAFTGPSHGWEAGIGLPKVLGDVI 1279
Query: 743 ESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAP 802
ES++GAI++DS +KE+V+ S++PLLEP+ TPET+ P +EL E+C + +S T
Sbjct: 1280 ESIAGAIYLDSKYDKEMVWRSMKPLLEPLATPETVERDPVKELQEFCDRRSYSRSYTKTH 1339
Query: 803 RINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
G ++V EV GT++ T + DK A+K+A K +L+ LKA+
Sbjct: 1340 E-GGVSSVVAEVQVEGTIYSATRSGRDKTVAQKLAVKSLLEDLKAA 1384
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDP TV SFIQSRGRARMQNSDY+L+++R
Sbjct: 474 FDPPATVRSFIQSRGRARMQNSDYVLLVRR 503
>gi|251764794|sp|Q69LX2.2|DCL2B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2b; AltName:
Full=Dicer-like protein 2b; Short=OsDCL2b
Length = 1377
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/907 (42%), Positives = 544/907 (59%), Gaps = 72/907 (7%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR------------------------------ 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 482 FDPSATVCSFIQSRGRARMENSDYLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSIS 541
Query: 32 ------------YFK--PTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLE 77
Y++ TP FDI+K G CTL+LP + P+QTV +G LK+T CL+
Sbjct: 542 CQPLENTLCEDTYYRVESTPAFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLK 601
Query: 78 ACKKLHQIGALTDNLLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI- 133
AC++LH IGALTD+LLP++ V EE D E P YFP E V+ +++
Sbjct: 602 ACQELHAIGALTDSLLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLG 657
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
Y+CY I L+ P DI+LA++ +L S+ +F L + +V +K++G I L
Sbjct: 658 IYYCYKISLEGCPKTASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHL 716
Query: 194 TPDKVLLCRRFQIALFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPV 252
++V++ RRFQ + +I D +L+ N I ++ + + YLLLP IDW +
Sbjct: 717 NQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSM 776
Query: 253 ASLSFPC-DIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLG 311
S P + KH +C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L
Sbjct: 777 KFSSSPIYEANNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD 836
Query: 312 HLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQRE 371
L+ANS ++DG +TYK +++ R+G+ L F+ + LL G + +N+L +K++E
Sbjct: 837 -LDANSRLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNYYYKKEKE 895
Query: 372 PS-KISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 430
P + S ELPPELCRIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q
Sbjct: 896 PGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQF 954
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
+P K+LEA+TTKKCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +
Sbjct: 955 DVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNL 1014
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG---DNSGSYELNDHSLFNERKIYVTGR 547
ISNAALC+L C L G+I E F+P+ W+IP D G+ ++ S +Y +
Sbjct: 1015 ISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI---SFLAPNGMYSQRK 1071
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVN 606
+KSK +AD VEALIGA+LST GE + + +G+ ++F +P ER+ ++AE ++
Sbjct: 1072 MSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFID 1131
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
VR LE +L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP
Sbjct: 1132 VRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYP 1191
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-DSFERLSLEST 725
+P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL++ ++ + SF S
Sbjct: 1192 DCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGPS---- 1247
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAREL 785
+GWE+ PK LGD+IES++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L
Sbjct: 1248 YGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGL 1307
Query: 786 NEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
E+C + F + ++G ++V V A T + T + K AKK+ASK VLK L
Sbjct: 1308 QEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSATKSGPCK-LAKKLASKAVLKDL 1365
Query: 846 KASFPGT 852
A T
Sbjct: 1366 IAGHKDT 1372
>gi|50726394|dbj|BAD34005.1| CAF protein-like [Oryza sativa Japonica Group]
gi|51091635|dbj|BAD36404.1| CAF protein-like [Oryza sativa Japonica Group]
Length = 1375
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/905 (42%), Positives = 542/905 (59%), Gaps = 70/905 (7%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR------------------------------ 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 482 FDPSATVCSFIQSRGRARMENSDYLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSIS 541
Query: 32 ------------YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEAC 79
Y++ FDI+K G CTL+LP + P+QTV +G LK+T CL+AC
Sbjct: 542 CQPLENTLCEDTYYRVESTFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKAC 601
Query: 80 KKLHQIGALTDNLLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TY 135
++LH IGALTD+LLP++ V EE D E P YFP E V+ +++ Y
Sbjct: 602 QELHAIGALTDSLLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLGIY 657
Query: 136 HCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTP 195
+CY I L+ P DI+LA++ +L S+ +F L + +V +K++G I L
Sbjct: 658 YCYKISLEGCPKTASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQ 716
Query: 196 DKVLLCRRFQIALFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVAS 254
++V++ RRFQ + +I D +L+ N I ++ + + YLLLP IDW +
Sbjct: 717 EQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKF 776
Query: 255 LSFPC-DIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHL 313
S P + KH +C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L L
Sbjct: 777 SSSPIYEANNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-L 835
Query: 314 NANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPS 373
+ANS ++DG +TYK +++ R+G+ L F+ + LL G + +N+L +K++EP
Sbjct: 836 DANSRLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNYYYKKEKEPG 895
Query: 374 -KISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 432
+ S ELPPELCRIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q +
Sbjct: 896 DRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQFDV 954
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
P K+LEA+TTKKCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +IS
Sbjct: 955 PVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLIS 1014
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPG---DNSGSYELNDHSLFNERKIYVTGRKK 549
NAALC+L C L G+I E F+P+ W+IP D G+ ++ S +Y +
Sbjct: 1015 NAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI---SFLAPNGMYSQRKMS 1071
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVR 608
+KSK +AD VEALIGA+LST GE + + +G+ ++F +P ER+ ++AE ++VR
Sbjct: 1072 IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFIDVR 1131
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE +L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP
Sbjct: 1132 SLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDC 1191
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-DSFERLSLESTFG 727
+P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL++ ++ + SF S +G
Sbjct: 1192 TPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGPS----YG 1247
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
WE+ PK LGD+IES++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L E
Sbjct: 1248 WEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQE 1307
Query: 788 YCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+C + F + ++G ++V V A T + T + K AKK+ASK VLK L A
Sbjct: 1308 FCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSATKSGPCK-LAKKLASKAVLKDLIA 1365
Query: 848 SFPGT 852
T
Sbjct: 1366 GHKDT 1370
>gi|115453927|ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|122246906|sp|Q10HL3.1|DCL2A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2a; AltName:
Full=Dicer-like protein 2a; Short=OsDCL2a
gi|50399921|gb|AAT76309.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
gi|108709535|gb|ABF97330.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|113549035|dbj|BAF12478.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|215701504|dbj|BAG92928.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1410
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/829 (43%), Positives = 515/829 (62%), Gaps = 16/829 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YF P P+FDI+K G CTL+LP + P+QTV +G LK+T CL+AC++LH IGALTD+
Sbjct: 585 YFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDS 644
Query: 92 LLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TYHCYLIELKQNFN 147
LLP++ V EE D E P YFP E V+ +++ Y+CY I L+
Sbjct: 645 LLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPK 700
Query: 148 YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIA 207
P DI+LA++ +L S+ +F L + +V +K++G I L ++V++ RRFQ
Sbjct: 701 TASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTT 759
Query: 208 LFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPC-DIGLKH 265
+ +I D +L+ N I ++ + + YLLLP IDW + S P + KH
Sbjct: 760 ILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANNKH 819
Query: 266 HKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGG 325
+C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L L+ANS ++DG
Sbjct: 820 MTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-LDANSCLPQHDGT 878
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPS-KISFELPPELC 384
+TYK +++ R+G+ L F+ + LL G + +N+L C +K++EP + S ELPPELC
Sbjct: 879 VVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCYSKKEKEPGDRYSVELPPELC 938
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
RIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q +P K+LEA+TTK
Sbjct: 939 RIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQFDVPVLKILEALTTK 997
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
KCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +ISNAALC+L C
Sbjct: 998 KCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSN 1057
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
L G+I E F+P+ W+IP + + S +Y + +KSK +AD VEALIG
Sbjct: 1058 LVGYIHAEEFNPRDWIIPCLDYDERDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIG 1117
Query: 565 AFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSL 623
A+LST GE + + +G+ ++F +P ER+ ++AE +NVR LE +L Y F D L
Sbjct: 1118 AYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLL 1177
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
L+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP +P LTD+RSASVNN
Sbjct: 1178 LLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNN 1237
Query: 684 DCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIE 743
+CYA ++VK GL+KHILH+S EL++ ++ ++ F + ++GWE+ PK LGD+IE
Sbjct: 1238 NCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLGDVIE 1297
Query: 744 SLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPR 803
S++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L E+C + F +
Sbjct: 1298 SIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYE-KNH 1356
Query: 804 INGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPGT 852
++G ++V V A T + T + K AKK+ASK VLK L A T
Sbjct: 1357 VDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKAVLKDLIAGHKDT 1405
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 482 FDPSATVCSFIQSRGRARMENSDYLLLVGR 511
>gi|41469333|gb|AAS07189.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 1017
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/829 (43%), Positives = 515/829 (62%), Gaps = 16/829 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YF P P+FDI+K G CTL+LP + P+QTV +G LK+T CL+AC++LH IGALTD+
Sbjct: 192 YFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDS 251
Query: 92 LLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TYHCYLIELKQNFN 147
LLP++ V EE D E P YFP E V+ +++ Y+CY I L+
Sbjct: 252 LLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPK 307
Query: 148 YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIA 207
P DI+LA++ +L S+ +F L + +V +K++G I L ++V++ RRFQ
Sbjct: 308 TASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTT 366
Query: 208 LFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPC-DIGLKH 265
+ +I D +L+ N I ++ + + YLLLP IDW + S P + KH
Sbjct: 367 ILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANNKH 426
Query: 266 HKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGG 325
+C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L L+ANS ++DG
Sbjct: 427 MTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-LDANSCLPQHDGT 485
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPS-KISFELPPELC 384
+TYK +++ R+G+ L F+ + LL G + +N+L C +K++EP + S ELPPELC
Sbjct: 486 VVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCYSKKEKEPGDRYSVELPPELC 545
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
RIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q +P K+LEA+TTK
Sbjct: 546 RIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQFDVPVLKILEALTTK 604
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
KCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +ISNAALC+L C
Sbjct: 605 KCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSN 664
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
L G+I E F+P+ W+IP + + S +Y + +KSK +AD VEALIG
Sbjct: 665 LVGYIHAEEFNPRDWIIPCLDYDERDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIG 724
Query: 565 AFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSL 623
A+LST GE + + +G+ ++F +P ER+ ++AE +NVR LE +L Y F D L
Sbjct: 725 AYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLL 784
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
L+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP +P LTD+RSASVNN
Sbjct: 785 LLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNN 844
Query: 684 DCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIE 743
+CYA ++VK GL+KHILH+S EL++ ++ ++ F + ++GWE+ PK LGD+IE
Sbjct: 845 NCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLGDVIE 904
Query: 744 SLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPR 803
S++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L E+C + F +
Sbjct: 905 SIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYE-KNH 963
Query: 804 INGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPGT 852
++G ++V V A T + T + K AKK+ASK VLK L A T
Sbjct: 964 VDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKAVLKDLIAGHKDT 1012
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 89 FDPSATVCSFIQSRGRARMENSDYLLLVGR 118
>gi|413933739|gb|AFW68290.1| hypothetical protein ZEAMMB73_539070 [Zea mays]
Length = 707
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 316/704 (44%), Positives = 460/704 (65%), Gaps = 27/704 (3%)
Query: 151 PAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR 210
PA +IVLAV+ ++ S+ +F L + L+ ++++G I L ++V+ RRFQ +
Sbjct: 12 PA-EIVLAVKCDMGSDFISNSFKLWGVQDYLSFTMRYVGIIHLNQEQVIAARRFQTTILS 70
Query: 211 VIMDHNLDKLNEILKGLW-LRDNLEIDYLLLPASEQSIDWEPV----ASLSFPCDIGLKH 265
+++ ++L +++ +K L + + YLLLP IDW + + + ++ ++H
Sbjct: 71 LLISNDLSEVSNYIKNLLEMPASPGAVYLLLPVVSGKIDWRSIKFSASEMPEATNMDMRH 130
Query: 266 HKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGG 325
C + +VQTK G C+CM+ NS+VCTPH+G Y + G L LNANSL R+DG
Sbjct: 131 ---CYPCKDTGIVQTKDGTFCSCMLRNSIVCTPHNGMFYAVCGFL-DLNANSLLHRSDGS 186
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPS-KISFELPPELC 384
++YK +++ERY + L + + LL R++ +N+L KC +K++E S K ELPPELC
Sbjct: 187 FLSYKTYFKERYNLDLRCEDQALLEARKLVEVRNFLHKCNYKKEKERSGKSVVELPPELC 246
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
++M PMS T SFTF+PSIM+R+Q +LL++NLK M L MQ IP K+LEA+TTK
Sbjct: 247 IVVMSPMSAITLRSFTFIPSIMYRIQCMLLSMNLK-MQLGPSMQQFDIPALKILEALTTK 305
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
CQE F ESLETLGDSFLKY +Q F Y++ HEG+L+ K +ISNAALC+L C +
Sbjct: 306 NCQEEFSQESLETLGDSFLKYITTQHFFVKYKHQHEGMLTKMKKNVISNAALCQLACSNN 365
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
L G+IR+E F+PK W++PG Y++ D SL +K+KSK +AD VEALIG
Sbjct: 366 LVGYIRSEAFNPKTWIVPGVG---YDICDRSL-----------RKLKSKRIADSVEALIG 411
Query: 565 AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLL 624
A+LST GE IFL +G+ ++F +P ER ++AE +NV+ LE LL+YSF DPSLL
Sbjct: 412 AYLSTAGEQAAYIFLKSLGMDIEFHKMPIERVITIKAEEFINVKSLELLLDYSFNDPSLL 471
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
+EALTHGSY + CYQRLEFLGDAVLD++ T Y Y++YP +P LTD+RSASVNN
Sbjct: 472 MEALTHGSYQIAGTTPCYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNS 531
Query: 685 CYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIES 744
CYA ++VK GLHKH+LH+S L+K + +D FE+ + GWE+ S PK LGD++ES
Sbjct: 532 CYAHAAVKAGLHKHVLHSSSALHKRMADYLDKFEQSFSGPSHGWEAGISLPKVLGDVVES 591
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRI 804
++GAI++D+ +K VV+ S++ +LEP++TP+T++ P +EL E+C ++++ TV R
Sbjct: 592 IAGAIYIDAKHDKGVVWRSMKRILEPLVTPDTLQNDPVKELQEFCDSKGYTLEYTVT-RD 650
Query: 805 NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
NG ++V EV GT +K T K AKK+A+ VL+ LKA+
Sbjct: 651 NGVSSVVAEVRTEGTTYKATRTGFSKLDAKKLAASSVLRDLKAA 694
>gi|242033791|ref|XP_002464290.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
gi|241918144|gb|EER91288.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
Length = 1385
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 345/834 (41%), Positives = 500/834 (59%), Gaps = 71/834 (8%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YF P P+F+I+K +G CTL+LP + P+QT+ A+G I +K+ CL AC++LH +GALTD
Sbjct: 593 YFNPLPRFNIDKALGTCTLHLPMSSPVQTIYAEGEISIIKRVVCLNACRELHAVGALTDY 652
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELV-NQCPQDTKITYHCYLIELKQNFNYDI 150
LLP+ V D + Y E P YFP +L+ N + Y+CY I L+
Sbjct: 653 LLPESSVPCEDEPDIVVDKYKEEQPDYFPEQLMDNWLSFCHRGLYYCYKISLEGCSETTT 712
Query: 151 PAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR 210
PA +IVLAV+ +L S+ F L + L+ ++++G I L ++V++ RRFQ +
Sbjct: 713 PA-EIVLAVKCDLGSDFISTTFKLWGVQDYLSFTIRYVGVIHLNQEQVIVARRFQTRILS 771
Query: 211 VIMDHNLDKLNEILKGLW-LRDNLEIDYLLLPASEQSIDWEPVASLSFPCD-------IG 262
+++ +L + +K L ++ + YLLLP IDW S+ F +
Sbjct: 772 LLISKDLSEDGNSIKSLLEMQVSSGAVYLLLPVVSGKIDW---CSIKFSSSEMHEDTIMD 828
Query: 263 LKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRN 322
+H +C + ++QTK GP C CM+ NS+V TPH+G +Y ++G+L LNANS +
Sbjct: 829 SRHSHSCK---DTGLLQTKGGPFCPCMLQNSIVSTPHNGMLYAVSGLLLDLNANSPMRES 885
Query: 323 DGGAITYKKHYEERYGIQL-CFDQELL-----LNGRRIFHAQNYLSKCRQEKQREPSKIS 376
++YK H++E +G+ L C DQ LL + R I H +NY +K++E + +
Sbjct: 886 ---VLSYKTHFKESHGLDLKCEDQPLLRASKLVKVRNILHERNY------KKEKESTNV- 935
Query: 377 FELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK 436
FELPPELC ++M P+S +T FTF+PSIM+R+Q +LL+VNLK L M+ IP K
Sbjct: 936 FELPPELCIVVMAPVSANTLRCFTFIPSIMYRIQCMLLSVNLKTQL-GPSMKQFDIPALK 994
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
VLEA+T KKC+E F ESLETLGDSFLK A +++ L
Sbjct: 995 VLEALTAKKCKEEFSQESLETLGDSFLKAWAFAA-------------------VVNCGIL 1035
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGR--KKVKSKT 554
L + G+IR+E F+P+ W+IPG + S GR +K+KSK
Sbjct: 1036 FLLWRSDQAKGYIRSETFNPETWIIPGVGNDS----------------CGRSLRKLKSKR 1079
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLL 614
+AD VEALIGA+LS GE +FL +G+ ++F +P ER+ + AE +N+R LE +L
Sbjct: 1080 IADSVEALIGAYLSAAGEQAAYLFLKSLGMDIEFHKMPVERKITINAENFINLRSLELML 1139
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
+Y+F DPSLL+EALTHGSY + CYQRLEFLGDAVLD++ T Y Y++YP +P LT
Sbjct: 1140 DYNFSDPSLLLEALTHGSYQIAGTTACYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLT 1199
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF 734
D+RSASVNN CYA ++VK GLHKHILH+S L+K + +D FE+ + GWE+
Sbjct: 1200 DLRSASVNNSCYAHAAVKAGLHKHILHSSSALHKKMADYLDKFEQSFSGPSHGWEAGICL 1259
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PK LGD+IES++GAI++D+ +K+VV+ ++ LLEP+ TP+T+ + P +EL+E+C
Sbjct: 1260 PKVLGDVIESIAGAIYIDTKNDKKVVWRKMKRLLEPLATPDTLEIDPVKELHEFCDPKTC 1319
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
S+K TVA R + +V VEV GT +K T K AKK+A+K VLK +KA+
Sbjct: 1320 SIKYTVA-REDRVTSVAVEVQTKGTTYKATRTGLTKRDAKKLAAKSVLKDMKAA 1372
>gi|449532911|ref|XP_004173421.1| PREDICTED: endoribonuclease Dicer homolog 2-like, partial [Cucumis
sativus]
Length = 307
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/300 (67%), Positives = 246/300 (82%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
VLEAITTKKCQE F+LESLETLGDSFLKYA Q LF+T+QN HEGLL++KKDRI+SNAAL
Sbjct: 1 VLEAITTKKCQEKFNLESLETLGDSFLKYATGQHLFRTFQNDHEGLLTLKKDRIVSNAAL 60
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ GC+HK+ GFIR E FDP+ W IPGD Y+L + LF+ RK+YV ++K+KSK +A
Sbjct: 61 RRRGCEHKISGFIRDEAFDPQNWDIPGDTHEVYQLREEVLFSGRKVYVQRKRKIKSKRIA 120
Query: 557 DVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNY 616
DVVEALIGA+LSTGGE + FL+RIGI+V+F VPYER F+V +L+NV HLESLL Y
Sbjct: 121 DVVEALIGAYLSTGGEKAAMQFLNRIGIEVNFDFVPYERPFRVDVHKLINVGHLESLLKY 180
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
+F D SLL+EA+THGSYMLPEIPRCYQRLEFLGD+VLDY ITV+LYNKYP ++P LTDM
Sbjct: 181 TFNDRSLLLEAMTHGSYMLPEIPRCYQRLEFLGDSVLDYAITVHLYNKYPGMTPELLTDM 240
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPK 736
RSASV+NDCY+ +++K LHK ILH S +L+K I+ V +FE LS E+T+GWESE SFPK
Sbjct: 241 RSASVSNDCYSRTALKAQLHKSILHCSHDLHKHISSAVQNFETLSSEATYGWESEISFPK 300
>gi|302819693|ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
gi|300140718|gb|EFJ07438.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
Length = 1719
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 288/876 (32%), Positives = 432/876 (49%), Gaps = 124/876 (14%)
Query: 2 FDPSHTVCSFIQSRGRARMQ-NSDYLLMLK------------------------------ 30
FD T+ S +QSRGRAR + +S Y+ +L+
Sbjct: 803 FDVCQTLRSHVQSRGRARNRLSSTYVWLLETGNVEQLNLFNQLCTSERVVEDQDSVSFIH 862
Query: 31 --------RYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQ----TACLEA 78
RY+ PKF K+ +CT+ P N P+++V +G ++ +Q ACL+A
Sbjct: 863 EYCARLGDRYYNAKPKFSF-KDSFVCTVEFPPNAPLRSV--EGPLRRTEQLAKKAACLQA 919
Query: 79 CKKLHQIGALT-DNLLPDVV-VEEHDAQKHGNEP------YDAEHPIYFPPELV-NQCPQ 129
C+KL+ +G + D L PDV +E D NE + P+ F V N+
Sbjct: 920 CRKLYDMGEVRPDTLCPDVDDFDEEDQSMRKNESGKRKEIFSTAKPLIFEGSWVFNESGV 979
Query: 130 DTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLG 189
+ C++IE ++ Y + V +++E+ L + + +G
Sbjct: 980 QLQFYKICFVIEPPESRTYS----NFGFLVNCVIDAEVTDSEVTLFSRNRVVNARVHRVG 1035
Query: 190 KIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ--SI 247
IQL ++V + +Q L + + LW N +LLLP + SI
Sbjct: 1036 PIQLDANQVKAAKAYQELLLNGAFNRLARCSGSPQEILW---NKSQAFLLLPVHDDNDSI 1092
Query: 248 DWEPVA-------------SLSFPCD---IGLKHHKNCSTMSNARVVQTKSGPLCTCMIY 291
DW V S S P D +G K H A V+ T +G + + +
Sbjct: 1093 DWTSVHATAGVYRTLCSNFSPSSPMDGDGVGEKTH--------ADVLCTANGYVHSSALQ 1144
Query: 292 NSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNG 351
+ VV T H+G+++ +TGVL + A SL + TY +Y+++Y L ++ LL
Sbjct: 1145 DMVVATVHNGRLFCVTGVLENFTAASLLPKR---GFTYIDYYKDKYQRTLRLPEQPLLKA 1201
Query: 352 RRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQS 411
+ N + ++++ + ELPPELC + L S FVPS +HR S
Sbjct: 1202 KPTHAFHNLPIRPKEQEGSRQEESFVELPPELCLCLEIKSGL--IRSLYFVPSFLHRFTS 1259
Query: 412 LLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQL 471
+ A+ L++ L IP +K+LEAIT+KKC E F ESLE LGDSFLKY +Q+L
Sbjct: 1260 TVCAIQLRSPLWPW------IPAAKILEAITSKKCHEEFSYESLELLGDSFLKYVVTQKL 1313
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG----DNS- 526
F Y HEG LS ++ R NAAL +L + +IR E F+P W PG D+S
Sbjct: 1314 FLVYDKKHEGQLSARRSRATCNAALHQLAKSSGIAEYIRDEEFNPSNWTGPGMLTSDSSK 1373
Query: 527 -----GSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
GSYE N+ + F+ G + ++ K +ADVVEALIGA+L+T G + + +
Sbjct: 1374 CRHQQGSYE-NEENYFSS---CANGHRGIRRKALADVVEALIGAYLATSGPPSAMELMKQ 1429
Query: 582 IGIKVDF--VNVPYERQFQVQAERL----VNVRHLESLLNYSFRDPSLLVEALTHGSYML 635
+GI ++F + RQ + AE ++ LE L Y F++ SLLVEA+TH S
Sbjct: 1430 LGIDIEFDIGLLASARQASLPAESFQHLQASLESLEHKLQYKFQNRSLLVEAITHASQ-- 1487
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
P CYQRLEFLGD VLD+L++ +L+ +P L PG LTD+RSA+VNN +A ++HGL
Sbjct: 1488 PNCLLCYQRLEFLGDGVLDFLVSRHLFETHPGLPPGTLTDLRSAAVNNKWFARLVLRHGL 1547
Query: 696 HKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGC 755
H+H+ H S EL I V + + S F + S PK LGD++ES++GAIFVD+
Sbjct: 1548 HQHLQHGSVELDCEIRKFVQNVKEKPDASCF---EDLSAPKVLGDLLESITGAIFVDTNF 1604
Query: 756 NKEVVFESIRPLLEPMITPETMRLQPARELNEYCQK 791
+ E ++ + PLL P++TP T+R P R L E C +
Sbjct: 1605 DLEKLWRVVLPLLSPLVTPATLRFHPVRILMELCAR 1640
>gi|413933740|gb|AFW68291.1| hypothetical protein ZEAMMB73_565304 [Zea mays]
Length = 462
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/468 (45%), Positives = 296/468 (63%), Gaps = 10/468 (2%)
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
M P+S +T +SF+FVPSIM+R+Q LLL+ LK + L MQ I K+LEA+TTK+CQ
Sbjct: 1 MAPVSANTLFSFSFVPSIMYRIQCLLLSAKLK-IQLGPRMQQFNITAMKILEALTTKECQ 59
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
E F +ESLETLGDSF+KY Q LF Y+ H E +L+ ++ +SN ALC+L C ++ G
Sbjct: 60 EKFSMESLETLGDSFIKYVTGQNLFNKYK-HREDMLTSMREEKVSNPALCQLACKSEIVG 118
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
+IR E F+P+ W IPG S N +Y + +KSK +AD VEAL GA+L
Sbjct: 119 YIRGELFNPQKWTIPGFGYDSRGNNKVFFRATNNMYSLKKISIKSKRIADTVEALTGAYL 178
Query: 568 STGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVE 626
ST GE + F+ +G+ V+ + ER ++E L++ L+++L Y F D SLLVE
Sbjct: 179 STCGELAAVHFIKALGMDVELHSKMQVERTITTKSEELIDAESLQTMLKYVFYDTSLLVE 238
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
ALTH SY + I C +RLEFLGDAVLDY++T Y Y KYP +P LT++R ASVNN CY
Sbjct: 239 ALTHSSYNITGITACNERLEFLGDAVLDYILTYYFYRKYPNCTPALLTNLRKASVNNCCY 298
Query: 687 ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLS 746
A ++VK GLHKHILH+S + + +N +S S S GWE+ S P+ L D+ E+++
Sbjct: 299 AHAAVKAGLHKHILHSSSK--QMVNDLENSGRSFSGPS-HGWEAGISLPEDLADLFEAIA 355
Query: 747 GAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRING 806
GAI+VDSG +KEVV+ +IR LLEP+ TP TM P EL E C+ H+ K + +P +
Sbjct: 356 GAIYVDSGNDKEVVWSAIRRLLEPLATPGTMEPDPVSELKELCEHKHYP-KPSYSPTRDS 414
Query: 807 KAAVT---VEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
A VT +V A T++ T +++ A+ +A+K +LK +KA+ G
Sbjct: 415 VAGVTRVVAQVTAARTVYSGTGTGRNQDVAEVLAAKALLKKIKAAARG 462
>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
Length = 1622
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 283/866 (32%), Positives = 442/866 (51%), Gaps = 73/866 (8%)
Query: 32 YFKPTPKF----DINKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQI 85
+F P P+F DI+ IC L LP+N P+ +++ Q +I+ K+ ACL ACK LH++
Sbjct: 589 FFCPKPQFFYFDDIDGT--ICKLVLPSNAPMHQIVSAPQSSIEAAKKDACLRACKSLHEL 646
Query: 86 GALTDNLLPDVVVEE------HDAQKHGNEPYDAEHPIYFPPELVNQCPQ-DTKITYHCY 138
GALTD LLPD E+ + + + H + P + ++ + + Y
Sbjct: 647 GALTDYLLPDQADEDLIHVFLTQKAQMDEDAREELHEMIVPAAFKESWTETESPVCLNSY 706
Query: 139 LIELKQNFN---YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQLT 194
I NF+ D L ++ L E +++ DL + RGR + L G
Sbjct: 707 YI----NFSPCPIDRVYKKFGLFLKAPLPQEAERMKLDLNLARGRSVETELIPSGATNFE 762
Query: 195 PDKVLLCRRFQIALFRVIMDHNLDKLNEI--LKGLWLRDNLEIDYLLLPAS-----EQSI 247
++V L +FQ ++I+D + + ++E L+ D+ YLLLP + + S+
Sbjct: 763 NNEVQLAEKFQRMFLKIILDRS-EXISEFVSLEKEDYVDSASKSYLLLPVNLCGHNKISV 821
Query: 248 DWEPVAS-LSFPCDIGLKHHKNCSTMSN-ARVVQTKSGPLCTCMIYNSVVCTPHSGQIYY 305
DWE V LS P G K + S +S +Q +G + NS+V P ++
Sbjct: 822 DWELVRRCLSSPI-FGTKVYAGNSEISKFDEQLQLANGSKSVHDVANSLVYVPCKETFFF 880
Query: 306 ITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCR 365
I+ V+ NA S++ + + +HY + +GI+L + ++ L+ +++F N L K
Sbjct: 881 ISDVVKESNAYSIYKDSK----NHVEHYYDTFGIRLSYPEQPLIKAKQLFCLDNLLRKKG 936
Query: 366 QEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH 425
+ R+ + ELP E+C++ + S S + +PSIMHRL+SLL+A+ LK L
Sbjct: 937 YSELRDKEEHFVELPAEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSAS 996
Query: 426 CMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSV 485
+ + VLEA+TT+KC E F LE LE LGD+FLK+A + +F TY EG L+
Sbjct: 997 FPEGREVTIDHVLEALTTEKCNEPFSLERLEVLGDAFLKFAVGRHVFLTYNAFDEGQLTR 1056
Query: 486 KKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG---------DNSGSYELNDHSL 536
++ I++N+ L + + L FIR + FDP + G S S+
Sbjct: 1057 RRSNIVNNSYLYTIAVRNNLQAFIRDQSFDPYHFYAVGRPCPVICNKQTEKSIHGQCGSV 1116
Query: 537 FNERKIYVTGRK---KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN--- 590
+ K V K ++ KT+AD+VEAL+GAF+ G + FL IGI DF
Sbjct: 1117 TDGAKTEVRCSKCHQWLRKKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIYTDFEESQV 1176
Query: 591 ---VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
+ F A+ ++++ +E+LL Y+F LL++A H SY CYQRLEF
Sbjct: 1177 KSICAASKVFMPLADE-IDIQAIENLLGYTFVHKGLLIQAFIHPSYN-NHGGGCYQRLEF 1234
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGDAVLDYLIT YLY+ YP L PG LTD+RS SVNN +A+ +V H HIL S L
Sbjct: 1235 LGDAVLDYLITSYLYSVYPKLKPGQLTDLRSVSVNNTTFAVVAVHQSFHSHILCDSSGLR 1294
Query: 708 KWINITV------DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
+ I V DS +RLS E S PKALGD++ES GAI +D+G + +
Sbjct: 1295 ESITRYVNFIGRPDSMKRLS--------EEPSCPKALGDLVESCMGAILLDTGFDLNXAW 1346
Query: 762 ESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLF 821
+ L+P+++ ++L P REL+E CQ + + + K +A + + K V +V+
Sbjct: 1347 RIMLSFLKPVMSFTRLQLNPKRELHELCQSYGWHL-KFLASKKDSKYLVEAKVNGENVSE 1405
Query: 822 KHTHADADKETAKKVASKEVLKSLKA 847
+ + +K+ A ++A+++V SLKA
Sbjct: 1406 AASALNINKKAAARMAAQQVHSSLKA 1431
>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 276/858 (32%), Positives = 433/858 (50%), Gaps = 56/858 (6%)
Query: 32 YFKPTPKF----DINKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQI 85
YF P P+F D++ IC L LP+N + ++ + Q +I+ K+ ACL ACK LH++
Sbjct: 585 YFCPKPQFYYFDDVDGT--ICKLILPSNAAMHSIESAPQSSIEAAKKDACLRACKSLHEL 642
Query: 86 GALTDNLLPDVVVEEHDAQK--------HGNEPYDAEHPIYFPPELVNQCPQ-DTKITYH 136
GALTD LLPD E+ D G + + H + P L + D + +
Sbjct: 643 GALTDYLLPDQADEDKDLVPDCSDSECCEGEDAREELHEMIVPASLKEPWTETDNPVCLN 702
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQLTP 195
Y I F D L ++ L E +++ DL + RGR + L G
Sbjct: 703 SYYISFFP-FPNDRVYKKFGLFLKAPLPQEAERMKLDLNLARGRSVKTELIPSGTTSFEN 761
Query: 196 DKVLLCRRFQIALFRVIMDHNLDKLNEI--LKGLWLRDNLEIDYLLLPAS-----EQSID 248
+++ L +FQ F++I+D + + ++E L+ D+ YLLLP + + S+D
Sbjct: 762 NEIQLAEKFQRMFFKIILDRS-EFISEFVSLEKKDFVDSGSKFYLLLPVNLFGHDKISVD 820
Query: 249 WEPVAS-LSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYIT 307
WE V LS P G + + +Q +G + NS+V P ++I+
Sbjct: 821 WELVRRCLSSPV-FGTSVCTSNNMSKFEEQLQLANGSKSVHDVVNSLVYVPCKDAFFFIS 879
Query: 308 GVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQE 367
V+ NA S++ + + +HY + + + L + + L+ +++F +N L K
Sbjct: 880 DVVKDKNAYSMYKDSK----NHVEHYYDTFSVHLLYPDQPLIKAKQLFCLENLLRKKGYS 935
Query: 368 KQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCM 427
+ R+ + ELPPE+C++ + S S + +PSIMHRL+SLL+A+ LK L
Sbjct: 936 ELRDKEEHFVELPPEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFP 995
Query: 428 QNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKK 487
+ + VLEA+TT+ C E F LE LE LGD+FLK+A + LF + EG L+ K+
Sbjct: 996 EGRELAIDHVLEALTTENCHESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKR 1055
Query: 488 DRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMI-----PGDNSGSYELNDHSLFNERKI 542
++N+ L + L +IR + F+P + + P + E N H L
Sbjct: 1056 SNAVNNSNLYMVAIKKNLQAYIRDQSFEPDHFYVVGRPCPVTCNKQTEKNIHGLCGSGTD 1115
Query: 543 YVTGRKK-------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN----- 590
+ + ++ KT+AD+VEAL+GAF+ G + FL IGI DF
Sbjct: 1116 GIKTEVRCSKYHHWLRKKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIHTDFKEPQLKS 1175
Query: 591 -VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
+ F A+ ++V +E LL YSF LL++A H SY CYQRLEFLG
Sbjct: 1176 ICSASKVFMPLADE-IDVLGIERLLGYSFIHKGLLIQAFIHPSYN-RHGGGCYQRLEFLG 1233
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
DAVLDYLIT YLY+ YP L PG LTD+RS SVNN+ +A+ +V+ H HIL S +L +
Sbjct: 1234 DAVLDYLITSYLYSVYPKLKPGQLTDLRSISVNNNTFAVVAVRQSFHSHILCDSSDLRES 1293
Query: 710 INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
I V+ R +ST GW PKALGD++ES GAI +D+G + ++ I L+
Sbjct: 1294 ITRYVNFIGR--PDSTRGWVKSHLVPKALGDLVESCMGAILLDTGFDLNRAWQIILSFLK 1351
Query: 770 PMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADAD 829
P+++ ++L P REL E CQ +++ K + + +G V V+ + + +
Sbjct: 1352 PVMSFTRLQLNPTRELYELCQSFGWNL-KFLPSKKDGNFLVEARVNGENVSAAASALNIN 1410
Query: 830 KETAKKVASKEVLKSLKA 847
K++A+++A++ V SLKA
Sbjct: 1411 KKSAQRMAAQIVCSSLKA 1428
>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
Length = 1657
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 285/870 (32%), Positives = 442/870 (50%), Gaps = 75/870 (8%)
Query: 32 YFKPTPKF-DINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F I+ GI C L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 601 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 660
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 661 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 717
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
Y+ I + ++ Y + L V L E + + DL + RGR+ +KHLGK
Sbjct: 718 LHFYYVKFIPIPEDRRYQM----FGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGK 773
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLPASEQS- 246
I +K++L +FQ ++++D + + G + LEI+ YLLLP ++
Sbjct: 774 IAFEKEKMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDV--TLEINSTFYLLLPIKQKCY 831
Query: 247 -----IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCT 297
IDW V +S F I + H + S+ + R++ G + SVV +
Sbjct: 832 GDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLD---GIFSKTDVVGSVVFS 888
Query: 298 PHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHA 357
PH+ +++ G+L +NA S + TY +H++ER+ I+L ++ LL ++IF+
Sbjct: 889 PHNNIFFFVDGILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNL 943
Query: 358 QNYL----SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
+N L + + + RE + ELPPELC + + S S + +PS+M+RL++LL
Sbjct: 944 RNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 1003
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
+A+ LK+++L + I S +LEA+TT+KC E LE E LGD+FLKY + F
Sbjct: 1004 VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 1063
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELND 533
TY+ EG L+ ++ +++N+ L +L KL +IR + F+P + PG D
Sbjct: 1064 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTD 1123
Query: 534 HSL-FNERKIYVTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
+ ++ I+ R+ + K +ADVVE+LIGAFL GG FL
Sbjct: 1124 VEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHW 1183
Query: 582 IGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
IGI VDF N R + L ++ LE L+ Y F+ LL++A H S+
Sbjct: 1184 IGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-Q 1242
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +H
Sbjct: 1243 HSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 1302
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
KH++ S L I+ + + +LS S E + PKALGDI+ES GA+ +DSG N
Sbjct: 1303 KHLIKDSNHLTSAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIGAVLLDSGFN 1360
Query: 757 KEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHA 816
V++ + LL+P++T M P REL E CQ H F + + +G+ V VEV+
Sbjct: 1361 LNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNI 1420
Query: 817 NGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ T A+ + + A+K A++E L LK
Sbjct: 1421 KSKIIICTAANRNSKAARKFAAQETLSKLK 1450
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+++L+R
Sbjct: 502 FDLPETVASFIQSRGRARMTKSKYVVLLER 531
>gi|115459356|ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza sativa Japonica Group]
Length = 1090
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 284/870 (32%), Positives = 439/870 (50%), Gaps = 75/870 (8%)
Query: 32 YFKPTPKFDI--NKEMGICTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F E IC L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 34 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 93
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 94 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 150
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
Y+ I + ++ Y + L V L E + + DL + RGR+ +KHLGK
Sbjct: 151 LHFYYVKFIPIPEDRRYQM----FGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGK 206
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLPASEQS- 246
I +K++L +FQ ++++D + + L LEI+ YLLLP ++
Sbjct: 207 IAFEKEKMMLAHKFQEMCLKILLDRS--EFTSPHVKLGNDVTLEINSTFYLLLPIKQKCY 264
Query: 247 -----IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCT 297
IDW V +S F I + H + S+ + R++ G + SVV +
Sbjct: 265 GDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLD---GIFSKTDVVGSVVFS 321
Query: 298 PHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHA 357
PH+ +++ G+L +NA S + TY +H++ER+ I+L ++ LL ++IF+
Sbjct: 322 PHNNIFFFVDGILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNL 376
Query: 358 QNYL----SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
+N L + + + RE + ELPPELC + + S S + +PS+M+RL++LL
Sbjct: 377 RNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 436
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
+A+ LK+++L + I S +LEA+TT+KC E LE E LGD+FLKY + F
Sbjct: 437 VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 496
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELND 533
TY+ EG L+ ++ +++N+ L +L KL +IR + F+P + PG D
Sbjct: 497 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTD 556
Query: 534 HSL-FNERKIYVTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
+ ++ I+ R+ + K +ADVVE+LIGAFL GG FL
Sbjct: 557 VEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHW 616
Query: 582 IGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
IGI VDF N R + L ++ LE L+ Y F+ LL++A H S+
Sbjct: 617 IGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-Q 675
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +H
Sbjct: 676 HSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 735
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
KH++ S L I+ + + +LS S E + PKALGDI+ES GA+ +DSG N
Sbjct: 736 KHLIKDSNHLTSAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIGAVLLDSGFN 793
Query: 757 KEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHA 816
V++ + LL+P++T M P REL E CQ H F + + +G+ V VEV+
Sbjct: 794 LNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNI 853
Query: 817 NGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ T A+ + + A+K A++E L LK
Sbjct: 854 KSKIIICTAANRNSKAARKFAAQETLSKLK 883
>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 285/870 (32%), Positives = 441/870 (50%), Gaps = 75/870 (8%)
Query: 32 YFKPTPKF-DINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F I+ GI C L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 575 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 634
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 635 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 691
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
Y+ I + ++ Y + L V L E + + DL + RGR+ +KHLGK
Sbjct: 692 LHFYYVKFIPIPEDRRYQM----FGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGK 747
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLPASEQS- 246
I +K++L +FQ ++++D + + L LEI+ YLLLP ++
Sbjct: 748 IAFEKEKMMLAHKFQEMCLKILLDRS--EFTSPHVKLGNDVTLEINSTFYLLLPIKQKCY 805
Query: 247 -----IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCT 297
IDW V +S F I + H + S+ + R++ G + SVV +
Sbjct: 806 GDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLD---GIFSKTDVVGSVVFS 862
Query: 298 PHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHA 357
PH+ +++ G+L +NA S + TY +H++ER+ I+L ++ LL ++IF+
Sbjct: 863 PHNNIFFFVDGILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNL 917
Query: 358 QNYL----SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
+N L + + + RE + ELPPELC + + S S + +PS+M+RL++LL
Sbjct: 918 RNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 977
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
+A+ LK+++L + I S +LEA+TT+KC E LE E LGD+FLKY + F
Sbjct: 978 VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 1037
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELND 533
TY+ EG L+ ++ +++N+ L +L KL +IR + F+P + PG D
Sbjct: 1038 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTD 1097
Query: 534 HSL-FNERKIYVTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
+ ++ I+ R+ + K +ADVVE+LIGAFL GG FL
Sbjct: 1098 VEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHW 1157
Query: 582 IGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
IGI VDF N R + L ++ LE L+ Y F+ LL++A H S+
Sbjct: 1158 IGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-Q 1216
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +H
Sbjct: 1217 HSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 1276
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
KH++ S L I+ + + +LS S E + PKALGDI+ES GA+ +DSG N
Sbjct: 1277 KHLIKDSNHLTSAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIGAVLLDSGFN 1334
Query: 757 KEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHA 816
V++ + LL+P++T M P REL E CQ H F + + +G+ V VEV+
Sbjct: 1335 LNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNI 1394
Query: 817 NGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ T A+ + + A+K A++E L LK
Sbjct: 1395 KSKIIICTAANRNSKAARKFAAQETLSKLK 1424
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+++L+R
Sbjct: 476 FDLPETVASFIQSRGRARMTKSKYVVLLER 505
>gi|215694849|dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1058
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 284/870 (32%), Positives = 439/870 (50%), Gaps = 75/870 (8%)
Query: 32 YFKPTPKFDI--NKEMGICTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F E IC L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 2 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 61
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 62 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 118
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
Y+ I + ++ Y + L V L E + + DL + RGR+ +KHLGK
Sbjct: 119 LHFYYVKFIPIPEDRRYQM----FGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGK 174
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLPASEQS- 246
I +K++L +FQ ++++D + + L LEI+ YLLLP ++
Sbjct: 175 IAFEKEKMMLAHKFQEMCLKILLDRS--EFTSPHVKLGNDVTLEINSTFYLLLPIKQKCY 232
Query: 247 -----IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCT 297
IDW V +S F I + H + S+ + R++ G + SVV +
Sbjct: 233 GDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLD---GIFSKTDVVGSVVFS 289
Query: 298 PHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHA 357
PH+ +++ G+L +NA S + TY +H++ER+ I+L ++ LL ++IF+
Sbjct: 290 PHNNIFFFVDGILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNL 344
Query: 358 QNYL----SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
+N L + + + RE + ELPPELC + + S S + +PS+M+RL++LL
Sbjct: 345 RNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 404
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
+A+ LK+++L + I S +LEA+TT+KC E LE E LGD+FLKY + F
Sbjct: 405 VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 464
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELND 533
TY+ EG L+ ++ +++N+ L +L KL +IR + F+P + PG D
Sbjct: 465 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTD 524
Query: 534 HSL-FNERKIYVTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
+ ++ I+ R+ + K +ADVVE+LIGAFL GG FL
Sbjct: 525 VEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHW 584
Query: 582 IGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
IGI VDF N R + L ++ LE L+ Y F+ LL++A H S+
Sbjct: 585 IGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-Q 643
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +H
Sbjct: 644 HSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 703
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
KH++ S L I+ + + +LS S E + PKALGDI+ES GA+ +DSG N
Sbjct: 704 KHLIKDSNHLTSAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIGAVLLDSGFN 761
Query: 757 KEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHA 816
V++ + LL+P++T M P REL E CQ H F + + +G+ V VEV+
Sbjct: 762 LNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNI 821
Query: 817 NGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ T A+ + + A+K A++E L LK
Sbjct: 822 KSKIIICTAANRNSKAARKFAAQETLSKLK 851
>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 275/868 (31%), Positives = 439/868 (50%), Gaps = 71/868 (8%)
Query: 32 YFKPTPKFDI--NKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGA 87
+F P+P F + E IC + LP N + + Q + K+ ACL+AC K H++GA
Sbjct: 565 FFNPSPAFFYIDDTEGIICRVILPPNAAFRQMDGQPCQSKDEAKRDACLKACMKFHELGA 624
Query: 88 LTDNLLPDVVVEEHDAQKHGNEPYDAE---------HPIYFPPELV-NQCPQDTKITYHC 137
LTD LLP ++ A + E H + P L ++C QD + H
Sbjct: 625 LTDFLLPGPGSRKNKASSPNGSASNKEEDDSLREELHEMLIPSVLKPSRCKQDCLLDLHF 684
Query: 138 YLIELKQNFNYDIPAHD----IVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQ 192
Y + + IPA L V L E +K+ DL + RGR+ +KHLG +
Sbjct: 685 YYFKF-----FPIPADRHYQMFGLFVINPLPEEAEKLEVDLHLARGRIVKTGIKHLGTMV 739
Query: 193 LTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLPASEQS--- 246
++++L R FQ ++++D + ++++ L D LEI YLLLP ++
Sbjct: 740 FDKEQMILARNFQEMFLKILLDRSEFTSSDVI--LCNDDTLEISSTFYLLLPIKQKCCGD 797
Query: 247 ---IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPH 299
IDW V +S F + + H + + R++ + S++ PH
Sbjct: 798 IFVIDWPTVVRCLSSPVFRDPVDVSVHGSYIPNESLRLLDEVYS---RTDVVGSLIFVPH 854
Query: 300 SGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQN 359
+ + I +L LN S F GA TY++HY ER+GI+L ++ LL +++F+ N
Sbjct: 855 NNTFFIIDVILDKLNGRSEFN----GA-TYEEHYRERFGIELSHPEQPLLKAKQLFNLHN 909
Query: 360 YL-SKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA 415
L + R+ S++ ELPPELC + + S S + +PS+M RL++ L+A
Sbjct: 910 LLHDRLRETTDSRGSELVEHFVELPPELCSLKITGFSKDMSSSLSLLPSLMCRLENFLVA 969
Query: 416 VNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTY 475
+ LK+++L + I S +LEAITT++C E LE E LGD+FLKY + F +Y
Sbjct: 970 IELKDLMLSSFPEASQISASAILEAITTERCLERISLERFEVLGDAFLKYVVGRHNFMSY 1029
Query: 476 QNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHS 535
+ EG L+ ++ I++N+ L +L L +IR + F+P + G D
Sbjct: 1030 EGLDEGQLTRRRSDIVNNSNLHELSVKRNLQVYIRDQQFEPTQFFALGRPCKVVCHADME 1089
Query: 536 LFNERKIYVTGRKK------------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
+ +K R + + KT+ADVVE+L+GAFL GG FL +G
Sbjct: 1090 VSIHQKNIDPDRPENCNVRCTKSHHWLHKKTIADVVESLLGAFLVEGGFKAAFAFLHWVG 1149
Query: 584 IKVDFVNVPYERQFQVQA-----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 638
I VDF + R + L+NV LE L+ Y F+ L++EA H S+
Sbjct: 1150 IDVDFEDSALYRVLNASSINLSLMNLINVAELEELIGYKFKHKGLIIEAFVHPSFN-KHS 1208
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
CYQ+LEFLGDAVL+YL+T YLY+ YP L PG++TD++S +V ND +A +++ +HK+
Sbjct: 1209 GGCYQKLEFLGDAVLEYLMTSYLYSAYPDLKPGEITDLKSLAVCNDSFAYVAIQKCIHKY 1268
Query: 699 ILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKE 758
I+ S L K ++ +++ +L S E + PK LGDI+ES A+ +DSG N
Sbjct: 1269 IIKDSNHLTKAVS-KFENYIKLP-NSEKDLVEEPACPKVLGDIVESCVAAVLLDSGFNLN 1326
Query: 759 VVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
V++ + LL+P+++ M + P RE+ E CQ + + + +G+ V VEV+ N
Sbjct: 1327 YVWKLVLMLLKPVLSFSGMHMNPMREIRELCQCNELELGLPKPMKADGEYHVKVEVNINS 1386
Query: 819 TLFKHTHADADKETAKKVASKEVLKSLK 846
T+ T A+ + + A+K+A++E L LK
Sbjct: 1387 TMISCTAANRNSKVARKLAARETLSKLK 1414
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+++L+R
Sbjct: 466 FDLPETVASFIQSRGRARMTISKYVVLLER 495
>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 285/876 (32%), Positives = 442/876 (50%), Gaps = 81/876 (9%)
Query: 32 YFKPTPKF-DINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F I+ GI C L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 514 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 573
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 574 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 630
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
Y+ I + ++ Y + L V L E + + DL + RGR+ +KHLGK
Sbjct: 631 LHFYYVKFIPIPEDRRYQM----FGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGK 686
Query: 191 IQLTPDK------VLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLP 241
I +K ++L +FQ ++++D + + G + LEI+ YLLLP
Sbjct: 687 IAFEKEKASSCSSMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDV--TLEINSTFYLLLP 744
Query: 242 ASEQS------IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIY 291
++ IDW V +S F I + H + S+ + R++ G +
Sbjct: 745 IKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLD---GIFSKTDVV 801
Query: 292 NSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNG 351
SVV +PH+ +++ G+L +NA S + TY +H++ER+ I+L ++ LL
Sbjct: 802 GSVVFSPHNNIFFFVDGILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKA 856
Query: 352 RRIFHAQNYL----SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMH 407
++IF+ +N L + + + RE + ELPPELC + + S S + +PS+M+
Sbjct: 857 KQIFNLRNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMY 916
Query: 408 RLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
RL++LL+A+ LK+++L + I S +LEA+TT+KC E LE E LGD+FLKY
Sbjct: 917 RLENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVV 976
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
+ F TY+ EG L+ ++ +++N+ L +L KL +IR + F+P + PG
Sbjct: 977 GRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCK 1036
Query: 528 SYELNDHSL-FNERKIYVTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVG 575
D + ++ I+ R+ + K +ADVVE+LIGAFL GG
Sbjct: 1037 VVCNTDVEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAA 1096
Query: 576 LIFLDRIGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTH 630
FL IGI VDF N R + L ++ LE L+ Y F+ LL++A H
Sbjct: 1097 FAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVH 1156
Query: 631 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSS 690
S+ CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++
Sbjct: 1157 PSFS-QHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAA 1215
Query: 691 VKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIF 750
V+ +HKH++ S L I+ + + +LS S E + PKALGDI+ES GA+
Sbjct: 1216 VEKSIHKHLIKDSNHLTSAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIGAVL 1273
Query: 751 VDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAV 810
+DSG N V++ + LL+P++T M P REL E CQ H F + + +G+ V
Sbjct: 1274 LDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHV 1333
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
VEV+ + T A+ + + A+K A++E L LK
Sbjct: 1334 KVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 1369
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+++L+R
Sbjct: 415 FDLPETVASFIQSRGRARMTKSKYVVLLER 444
>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
Length = 1657
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 277/874 (31%), Positives = 447/874 (51%), Gaps = 81/874 (9%)
Query: 32 YFKPTPKFDINKEMG--ICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGA 87
YF P P+F ++G +C + LP+N PI +++ Q + K+ ACL+A ++LH++GA
Sbjct: 603 YFDPKPQFSYYDDLGGTVCHVNLPSNAPIPQIVSRSQSSKDAAKKDACLKAVEELHKLGA 662
Query: 88 LTDNLLPDVVVEEHDAQKHGNEPYDAE-----------HPIYFPPELVNQCPQDTKITYH 136
L+D LLP + Q+ G D++ H + FP L + +
Sbjct: 663 LSDYLLPMRGRGSANEQESGLNSSDSDSSEDETSRRELHEMIFPAALKESWTGSGYLVLY 722
Query: 137 CYLIELK---QNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQ 192
CY I+ ++ NY + L V+ L E +++ +L + RGR + VNL G ++
Sbjct: 723 CYHIKCTPDPRDRNYK----EFGLFVKAPLPQEAERMGLELHLARGRSVMVNLIPSGVVE 778
Query: 193 LTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDN----LEIDYLLLPA----SE 244
L +++ FQ +VI LD+L + + + LR+N + YLLLP +E
Sbjct: 779 LLEEEITQAESFQEMFLKVI----LDRLEFVQEYIPLRNNASRSVSSSYLLLPMIFHDNE 834
Query: 245 QS--IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP 298
S IDW + +S F D L S+ ++ + G + I NS+V P
Sbjct: 835 GSLFIDWNVIRRCLSSKIFQNDACLIVKGTASSDTH---LMLYDGHRRSSDIENSLVYVP 891
Query: 299 HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQ 358
+ G+ +++T + N +S + + G ++ +H + ++GI L + ++ LL + +F
Sbjct: 892 YKGEFFFVTNIERGKNGHSQY--KNSGFSSHFEHLKTKFGIHLNYPEQPLLRAKPLFLLH 949
Query: 359 NYLSKCRQE--KQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAV 416
N+L ++E + R + ELPPE+C++ + S S + +PSIMHRL++LL+A+
Sbjct: 950 NWLHNRKREDSEARHLEEYFIELPPEVCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAI 1009
Query: 417 NLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
LK L + +++LEA+TT+KCQE LE LE LGDSFLK+A ++ LF T+
Sbjct: 1010 ELKCRLAAAFPAGAEVTANRILEALTTEKCQERISLERLEILGDSFLKFAVARYLFLTHD 1069
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------DNSGSY 529
EG L+ ++ ++ N L KL L +IR +PF+P + + G + S
Sbjct: 1070 KFDEGELTRRRSYLVKNFNLLKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETSK 1129
Query: 530 ELNDH------SLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
+++ H + NE K G ++ KT++DVVEAL+GAFL G + FL IG
Sbjct: 1130 DIHSHDDATNNAKANETKC-SKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIG 1188
Query: 584 IKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 638
I+V+F + V +++ L++ L + F LL++AL H SY
Sbjct: 1189 IQVEFEASLVTDALMASNAYVLLADSIDISALQNSLGHRFLHKGLLLQALVHPSYH-KHG 1247
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
CYQRLEFLGDAVLDYLIT YLY+ YP L PG LTD+RS V N+ +A +V +K
Sbjct: 1248 GGCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKF 1307
Query: 699 ILHASQELYKWIN-----ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDS 753
+L S L I I FER SLE + PKALGD++ES GA+ VD+
Sbjct: 1308 LLCDSTSLLSDIKSYVHFIKAPPFERDSLE-------QPRCPKALGDLVESSVGAVLVDT 1360
Query: 754 GCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVE 813
G + V++ + ++P+++ +L P R++ E+CQ + +K + ++ G +V E
Sbjct: 1361 GFDMNCVWKIMLSFIDPIMSFSGFQLSPIRDITEFCQNCGWKLKFN-SSKMEGYYSVKAE 1419
Query: 814 VHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
V + A+ K+ A K+A+ +L LKA
Sbjct: 1420 VKGGNFHATASAANRRKKDAAKIAANLILTKLKA 1453
>gi|449505410|ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
sativus]
Length = 1228
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 277/874 (31%), Positives = 446/874 (51%), Gaps = 81/874 (9%)
Query: 32 YFKPTPKFDINKEMG--ICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGA 87
YF P P+F ++G +C + LP+N PI +++ Q + K+ ACL+A ++LH++GA
Sbjct: 174 YFDPKPQFSYYDDLGGTVCHVNLPSNAPIPQIVSRSQSSKDAAKKDACLKAVEELHKLGA 233
Query: 88 LTDNLLPDVVVEEHDAQKHGNEPYDAE-----------HPIYFPPELVNQCPQDTKITYH 136
L+D LLP + Q+ G D++ H + FP L + +
Sbjct: 234 LSDYLLPMRGRGSANEQESGLNSSDSDSSEDETSRRELHEMIFPAALKESWTGSGYLVLY 293
Query: 137 CYLIELK---QNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQ 192
CY I+ ++ NY + L V+ L E +++ +L + RGR + VNL G ++
Sbjct: 294 CYHIKCTPDPRDRNYK----EFGLFVKAPLPQEAERMGLELHLARGRSVMVNLIPSGVVE 349
Query: 193 LTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDN----LEIDYLLLPA----SE 244
L +++ FQ +VI LD+L + + + LR+N + YLLLP +E
Sbjct: 350 LLEEEITQAESFQEMFLKVI----LDRLEFVQEYIPLRNNASRSVSSSYLLLPMIFHDNE 405
Query: 245 QS--IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP 298
S IDW + +S F D L S+ ++ + G + I NS+V P
Sbjct: 406 GSLFIDWNVIRRCLSSKIFQNDACLIVKGTASSDTH---LMLYDGHRRSSDIENSLVYVP 462
Query: 299 HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQ 358
+ G+ ++T + N +S + + G ++ +H + ++GI L + ++ LL + +F
Sbjct: 463 YKGEFXFVTNIERGKNGHSQY--KNSGFSSHFEHLKTKFGIHLNYPEQPLLRAKPLFLLH 520
Query: 359 NYLSKCRQE--KQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAV 416
N+L ++E + R + ELPPE+C++ + S S + +PSIMHRL++LL+A+
Sbjct: 521 NWLHNRKREDSEARHLEEYFIELPPEVCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAI 580
Query: 417 NLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
LK L + +++LEA+TT+KCQE LE LE LGDSFLK+A ++ LF T+
Sbjct: 581 ELKCRLAAAFPAGAEVTANRILEALTTEKCQERISLERLEILGDSFLKFAVARYLFLTHD 640
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------DNSGSY 529
EG L+ ++ ++ N L KL L +IR +PF+P + + G + S
Sbjct: 641 KFDEGELTRRRSYLVKNFNLLKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETSK 700
Query: 530 ELNDH------SLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
+++ H + NE K G ++ KT++DVVEAL+GAFL G + FL IG
Sbjct: 701 DIHSHDDATNNAKANETKC-SKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIG 759
Query: 584 IKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 638
I+V+F + V +++ L++ L + F LL++AL H SY
Sbjct: 760 IQVEFEASLVTDALMASNAYVLLADSIDISALQNSLGHRFLHKGLLLQALVHPSYH-KHG 818
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
CYQRLEFLGDAVLDYLIT YLY+ YP L PG LTD+RS V N+ +A +V +K
Sbjct: 819 GGCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKF 878
Query: 699 ILHASQELYKWIN-----ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDS 753
+L S L I I FER SLE + PKALGD++ES GA+ VD+
Sbjct: 879 LLCDSTSLLSDIKSYVHFIKAPPFERDSLE-------QPRCPKALGDLVESSVGAVLVDT 931
Query: 754 GCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVE 813
G + V++ + ++P+++ +L P R++ E+CQ + +K + ++ G +V E
Sbjct: 932 GFDMNCVWKIMLSFIDPIMSFSGFQLSPIRDITEFCQNCGWKLKFN-SSKMEGYYSVKAE 990
Query: 814 VHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
V + A+ K+ A K+A+ +L LKA
Sbjct: 991 VKGGNFHATASAANRRKKDAAKIAANLILTKLKA 1024
>gi|359475987|ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 282/904 (31%), Positives = 427/904 (47%), Gaps = 147/904 (16%)
Query: 11 FIQSRGRARMQNSDYLLMLK--------RYFKPTPKFDINKEMGI--CTLYLPNNCPIQT 60
F+ S G + +S L+ + +YF P P F G+ C L LP N QT
Sbjct: 573 FVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQT 632
Query: 61 VIAQGNIKT--LKQTACLEACKKLHQIGALTDNLLP--------DVVVEEHDA------- 103
+I GN + KQ CLEACKKLHQ+GAL D+LLP D++V+ +
Sbjct: 633 IIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTT 692
Query: 104 ---QKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLI-ELKQNFNYDIPAHDIVLAV 159
+ HG A + ++ Q KI + C ++ EL F VL +
Sbjct: 693 KRKELHGTTQTCALSGTW-GDKIDGAIFQAYKIDFSCNIVNELYSGF---------VLLI 742
Query: 160 RTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALF-----RVIMD 214
++L+ ++ + +L + + ++ G++ L ++V+ RF F R+ +
Sbjct: 743 ESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIG 802
Query: 215 HNLDK------LNEILKGLWLRDNLEIDYLLLP------ASEQS--IDWEPVASLSF--- 257
LN K LW N+ YLLLP S++S I+W + S +
Sbjct: 803 SKSSGVRREFLLNTQQKSLWSSSNM---YLLLPIESSNIPSDESWRINWPGINSCASVVE 859
Query: 258 ---------------------PCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVC 296
PC GL + C ++S V + + + N VV
Sbjct: 860 FLEKRSQLSTGNMNDDTGNPSPCSTGLVETE-CKSIS---TVHLANNSVHVNNLKNMVVL 915
Query: 297 TPHSGQIYYITGVLGHLNANSLFTR----NDGGAITYKKHYEERYGIQLCFDQELLLNGR 352
H+G+IY I V+ +A S F N T+ +++ +YGI L + + LL +
Sbjct: 916 AIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLK 975
Query: 353 RIFHAQNYLS--------KCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPS 404
+ +A N L + Q+ E ++ +PPEL I P+++ S +PS
Sbjct: 976 QSHNAHNLLVNFNDEDALQTGQKMLNEKAQTHVHMPPELLVSIEVPITV--LKSSYLLPS 1033
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLK 464
++HRL+SL+LA L+ + I +S +LEAITT +C E F +E LE LGDS LK
Sbjct: 1034 LIHRLESLMLASQLREEIA--FTTGSQISSSLILEAITTLRCSESFSMERLELLGDSVLK 1091
Query: 465 YAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGD 524
YA S LF Y HEG LS ++ ++ N+ L KLG D L G+IR FDP+ W+ PG
Sbjct: 1092 YAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQ 1151
Query: 525 NS------------------GSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAF 566
S G ++ D + + G + + SKT+AD VEALIGA+
Sbjct: 1152 RSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCD-RGHRWMGSKTIADCVEALIGAY 1210
Query: 567 LSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-----NVRHLESLLNYSFRDP 621
GG N L + GI V+ + + R + LES + Y F
Sbjct: 1211 YVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGYEFSVK 1270
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
LL+EA+TH + + CYQRLEFLGD+VLD LIT +LY + + PG+LTD+RSASV
Sbjct: 1271 GLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASV 1330
Query: 682 NNDCYALSSVKHGLHKHILHAS-------QELYKWINITVDSFERLSLESTFGWESETSF 734
NN+ +A +V+ L +H+ H S +E K+++ + D L+ST G
Sbjct: 1331 NNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGSDDVPN--PLQSTKG------- 1381
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PKALGD++ES++GAI +D+ N V+ +PLL P++TP+ + L P RELNE C +
Sbjct: 1382 PKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGY 1441
Query: 795 SMKK 798
+K+
Sbjct: 1442 FIKE 1445
>gi|296081735|emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 284/909 (31%), Positives = 429/909 (47%), Gaps = 155/909 (17%)
Query: 11 FIQSRGRARMQNSDYLLMLK--------RYFKPTPKFDINKEMGI--CTLYLPNNCPIQT 60
F+ S G + +S L+ + +YF P P F G+ C L LP N QT
Sbjct: 581 FVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQT 640
Query: 61 VIAQGNIKT--LKQTACLEACKKLHQIGALTDNLLP--------DVVVEEHDA------- 103
+I GN + KQ CLEACKKLHQ+GAL D+LLP D++V+ +
Sbjct: 641 IIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTT 700
Query: 104 ---QKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLI-ELKQNFNYDIPAHDIVLAV 159
+ HG A + ++ Q KI + C ++ EL F VL +
Sbjct: 701 KRKELHGTTQTCALSGTW-GDKIDGAIFQAYKIDFSCNIVNELYSGF---------VLLI 750
Query: 160 RTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALF-----RVIMD 214
++L+ ++ + +L + + ++ G++ L ++V+ RF F R+ +
Sbjct: 751 ESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIG 810
Query: 215 HNLDK------LNEILKGLWLRDNLEIDYLLLP------ASEQS--IDWEPVASLSF--- 257
LN K LW N+ YLLLP S++S I+W + S +
Sbjct: 811 SKSSGVRREFLLNTQQKSLWSSSNM---YLLLPIESSNIPSDESWRINWPGINSCASVVE 867
Query: 258 ---------------------PCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVC 296
PC GL + C ++S V + + + N VV
Sbjct: 868 FLEKRSQLSTGNMNDDTGNPSPCSTGLVETE-CKSIS---TVHLANNSVHVNNLKNMVVL 923
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGA-------ITYKKHYEERYGIQLCFDQELLL 349
H+G+IY I V+ +A S F DG A T+ +++ +YGI L + + LL
Sbjct: 924 AIHTGRIYSILDVVIDTSAESPF---DGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLL 980
Query: 350 NGRRIFHAQNYLS----------KCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSF 399
++ +A N L + Q+ E ++ +PPEL I P+++ S
Sbjct: 981 LLKQSHNAHNLLVNFNDEGGEALQTGQKMLNEKAQTHVHMPPELLVSIEVPITV--LKSS 1038
Query: 400 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLG 459
+PS++HRL+SL+LA L+ + I +S +LEAITT +C E F +E LE LG
Sbjct: 1039 YLLPSLIHRLESLMLASQLREEIA--FTTGSQISSSLILEAITTLRCSESFSMERLELLG 1096
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LKYA S LF Y HEG LS ++ ++ N+ L KLG D L G+IR FDP+ W
Sbjct: 1097 DSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRW 1156
Query: 520 MIPGDNS------------------GSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEA 561
+ PG S G ++ D + + G + + SKT+AD VEA
Sbjct: 1157 VAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCD-RGHRWMGSKTIADCVEA 1215
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-----NVRHLESLLNY 616
LIGA+ GG N L + GI V+ + + R + LES + Y
Sbjct: 1216 LIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGY 1275
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F LL+EA+TH + + CYQRLEFLGD+VLD LIT +LY + + PG+LTD+
Sbjct: 1276 EFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDL 1335
Query: 677 RSASVNNDCYALSSVKHGLHKHILHAS-------QELYKWINITVDSFERLSLESTFGWE 729
RSASVNN+ +A +V+ L +H+ H S +E K+++ + D L+ST G
Sbjct: 1336 RSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGSDDVPN--PLQSTKG-- 1391
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
PKALGD++ES++GAI +D+ N V+ +PLL P++TP+ + L P RELNE C
Sbjct: 1392 -----PKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELC 1446
Query: 790 QKHHFSMKK 798
+ +K+
Sbjct: 1447 DSLGYFIKE 1455
>gi|212723814|ref|NP_001131630.1| uncharacterized protein LOC100192986 [Zea mays]
gi|194692090|gb|ACF80129.1| unknown [Zea mays]
Length = 365
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/367 (47%), Positives = 250/367 (68%), Gaps = 15/367 (4%)
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
+L+ K +ISNAALC+L C + L G+IR+E F+PK W++PG Y++ D SL
Sbjct: 1 MLTKMKKNVISNAALCQLACSNNLVGYIRSEAFNPKTWIVPGVG---YDICDRSL----- 52
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQA 601
+K+KSK +AD VEALIGA+LST GE IFL +G+ ++F +P ER ++A
Sbjct: 53 ------RKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGMDIEFHKMPIERVITIKA 106
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
E +NV+ LE LL+YSF DPSLL+EALTHGSY + CYQRLEFLGDAVLD++ T Y
Sbjct: 107 EEFINVKSLELLLDYSFNDPSLLMEALTHGSYQIAGTTPCYQRLEFLGDAVLDHIFTDYF 166
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
Y++YP +P LTD+RSASVNN CYA ++VK GLHKH+LH+S L+K + +D FE+
Sbjct: 167 YHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHVLHSSSALHKRMADYLDKFEQSF 226
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQP 781
+ GWE+ S PK LGD++ES++GAI++D+ +K VV+ S++ +LEP++TP+T++ P
Sbjct: 227 SGPSHGWEAGISLPKVLGDVVESIAGAIYIDAKHDKGVVWRSMKRILEPLVTPDTLQNDP 286
Query: 782 ARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEV 841
+EL E+C ++++ TV R NG ++V EV GT +K T K AKK+A+ V
Sbjct: 287 VKELQEFCDSKGYTLEYTVT-RDNGVSSVVAEVRTEGTTYKATRTGFSKLDAKKLAASSV 345
Query: 842 LKSLKAS 848
L+ LKA+
Sbjct: 346 LRDLKAA 352
>gi|302794558|ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
gi|300153361|gb|EFJ20000.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
Length = 1686
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 256/777 (32%), Positives = 394/777 (50%), Gaps = 69/777 (8%)
Query: 31 RYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQ----TACLEACKKLHQIG 86
RY+ PKF K+ +CT+ P N P+++V +G ++ +Q ACL+AC+KL+ +G
Sbjct: 902 RYYNAKPKFSF-KDSFVCTVEFPPNAPLRSV--EGPLRRTEQLAKKAACLQACRKLYDMG 958
Query: 87 ALT-DNLLPDVV-VEEHDAQKHGNEP------YDAEHPIYFPPELV-NQCPQDTKITYHC 137
+ D L PDV +E D NE + P+ F V N+ + C
Sbjct: 959 EVRRDTLCPDVDDFDEEDQPMRKNESGKRKEIFSTAKPLIFEGSWVFNESGVQLQFYKIC 1018
Query: 138 YLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDK 197
+++E ++ Y + V +++E+ L + + +G IQL ++
Sbjct: 1019 FVVEPPESRTYS----NFGFLVNCVIDAEVTDSEVTLFSRNRVVNARVHRVGPIQLDANQ 1074
Query: 198 VLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ--SIDWEPVASL 255
V + +Q L + + LW + +L+LP + SIDW V +
Sbjct: 1075 VKAAKAYQELLLNGAFNRLARCSGSPQEILWDKSQA---FLVLPVHDDNDSIDWTSVHAT 1131
Query: 256 SFPCDIGLKHHKNCSTMSNARVVQ-TKSGPLCTCMIY-------NSVVCTPHSGQIYYIT 307
++ + S M V + T + LCT Y + VV T H+G+++ +T
Sbjct: 1132 AWVYRTLCSNFSPSSPMDGDGVGEKTHADMLCTANGYVHSSALQDMVVATVHNGRLFCVT 1191
Query: 308 GVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQE 367
GVL + A SL + TY +Y+++Y L ++ LL + N L + +++
Sbjct: 1192 GVLENFTAASLLPKR---GFTYIDYYKDKYQRTLRLPEQPLLKAKPTHAFHNLLIRPKEQ 1248
Query: 368 KQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCM 427
+ + ELPPELC + L S FVPS +HR S + A+ L++ L
Sbjct: 1249 EGSRQEESFVELPPELCLCLEIKSGL--IRSLYFVPSFLHRFTSTVCAIQLRSPLWPW-- 1304
Query: 428 QNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKK 487
IP +K+LEAIT+KKC E F ESLE LGDSFLKY +Q+LF Y HEG LS ++
Sbjct: 1305 ----IPAAKILEAITSKKCHEEFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARR 1360
Query: 488 DRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG----DNS------GSYELNDHSLF 537
R NAAL +L + +IR E F+P W PG D+S GS+E N+ + F
Sbjct: 1361 SRATCNAALYQLAKSSGIAEYIRDEEFNPSNWTGPGMLTSDSSKCRHQQGSFE-NEENYF 1419
Query: 538 NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF--VNVPYER 595
+ +G + ++ K +ADVVEALIGA+L+T G + + ++ I ++F + R
Sbjct: 1420 SS---CASGHRGIRRKALADVVEALIGAYLATSGPPSAMELMKQLDIDIEFDIGLLASAR 1476
Query: 596 QFQVQAERL----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
Q + AE ++ LE L Y F++ SLLVEA+TH S P CYQRLEFLGD
Sbjct: 1477 QASLPAESFQHLQASLESLEHKLQYKFQNRSLLVEAITHASQ--PNCLLCYQRLEFLGDG 1534
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN 711
VLD+L++ +L+ +P L PG LTD+RSA+VNN +A V+HGLH+H+ H S EL I
Sbjct: 1535 VLDFLVSRHLFETHPGLPPGTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGSVELDCEIR 1594
Query: 712 ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
V + + S F + S PK LGD++ES++GAIFVD+ + E ++ + P +
Sbjct: 1595 KFVQNVKEKPDASCF---EDLSAPKVLGDLLESITGAIFVDTNFDLERLWRVVLPFV 1648
>gi|296084589|emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 263/864 (30%), Positives = 427/864 (49%), Gaps = 60/864 (6%)
Query: 27 LMLKRYFKPTPKFDINKEMG--ICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKL 82
L+ YF P P+F + G +C + LP++ PI +++ Q +++ K+ ACL+A + L
Sbjct: 587 LLHDEYFNPKPEFYYFDDSGGTVCQINLPSSAPIHQIVSTPQSSMEAAKKDACLKAIQDL 646
Query: 83 HQIGALTDNLLPD---------VVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI 133
H +GAL D LLPD +V + D+ + + + H + P L + I
Sbjct: 647 HVLGALNDYLLPDQGNAHEELMLVSSDSDSCEADEDSREELHEMLVPAALKDSWSNLEHI 706
Query: 134 TYHCYLIELKQNFNYDIPAHDIV----LAVRTELESEIKKVNFDLEVDRGR-LTVNLKHL 188
+ Y I+ IP I L V+ L +E +++ DL + GR + L
Sbjct: 707 CLNSYYIKFTP-----IPEDRIYRKFGLFVKAPLPAEAERMVLDLHLSHGRSVMTELVPS 761
Query: 189 GKIQLTPDKVLLCRRFQIALFRVIMDHNL--DKLNEILKGLWLRDNLEIDYLLLPA---- 242
G + +++L FQ +VI++ ++ ++ + K + + + YLLLP
Sbjct: 762 GVTEFDENEILQAHNFQEMYLQVILNRSIFETEIVHLGKSDFCKSSSSTFYLLLPVILNE 821
Query: 243 --SEQSIDWEPVAS-LSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPH 299
+ ++DW+ + LS P + N + + G + NS+V P+
Sbjct: 822 CENMITVDWQIIRRCLSSPIFRNPADRVDKLPPLNDHL-RLADGVYRESDVINSLVYAPY 880
Query: 300 SGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQN 359
++++ + N S + + T+K +GI L F ++ LL+ +R+F +N
Sbjct: 881 KKAFFFVSRISAGRNGYSPYKDSSHLEYTWKT-----FGIHLEFPKQPLLSAKRLFSLRN 935
Query: 360 YLSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAV 416
L R+ E ++ ++PPELC + + S S + +PSIMHRL++LL+A+
Sbjct: 936 LLHN-RKHGSSESHELEEHFMDIPPELCHLKIIGFSKDIGSSVSLLPSIMHRLENLLVAI 994
Query: 417 NLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
LKNML + I +VLEA+TT+KC E F LE LE LGD+FLK+A ++LF Y
Sbjct: 995 ELKNMLSASFPEGAEITAHRVLEALTTEKCLERFSLERLEVLGDAFLKFAVGRRLFLLYD 1054
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN-----SGSYEL 531
EG L+ ++ +++N+ L KL L +IR + FDP + G E+
Sbjct: 1055 ALDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIRDQSFDPGQFFALGHRCPRICEKETEM 1114
Query: 532 NDHSLFNERKIYVTGRKK----VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
HS + K + KT+ADVVEAL+GAF+ G +FL IGI+VD
Sbjct: 1115 AIHSRCGKTPTTEVRCSKCHHWLHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGIQVD 1174
Query: 588 F-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY 642
F +N +Q +V LE LL + F LL++A+ H SY CY
Sbjct: 1175 FEAFQVINACISSTSYMQLASSTDVPALEKLLGHEFLHKGLLLQAIVHPSYN-KHGGGCY 1233
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA 702
QRLEFLGDAVLDYLIT YLY+ YP L PG +TD+RS SVNN +A +V LH+ ++
Sbjct: 1234 QRLEFLGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICD 1293
Query: 703 SQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFE 762
+ L + I VD +L+ PKALGD++ES GAI +D G + +
Sbjct: 1294 ASSLSEAIKKYVDFIRTPTLDKDL--HEGPKCPKALGDLVESCMGAILLDKGFDLNHAWN 1351
Query: 763 SIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFK 822
+ +L+ +++ ++L P REL E CQ H++ ++ + + G V +V +
Sbjct: 1352 IMLSILDRIMSFSDLQLNPIRELQELCQHHNWDLQFPTSKQ-GGTFLVEAKVSGDDICTT 1410
Query: 823 HTHADADKETAKKVASKEVLKSLK 846
+ +A+++ A+++AS ++ K LK
Sbjct: 1411 ASATNANRKDARRIASNQLFKKLK 1434
>gi|330370549|gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
Length = 1655
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 272/861 (31%), Positives = 408/861 (47%), Gaps = 109/861 (12%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
+Y+ P P F G+ C L LP N +QT++ N KQ CLEACK+LHQ+G
Sbjct: 602 KYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPPSRNSHLAKQLVCLEACKQLHQMG 661
Query: 87 ALTDNLLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQ-------CPQ---------D 130
AL D+L P + EE ++ D+ + C Q
Sbjct: 662 ALDDHLTPSI--EEPSENACISKGKDSGAGAGAGAGTTKRKELHGTTCIQALCGSWGEKS 719
Query: 131 TKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGK 190
+ Y + K N + VL + ++L ++ DL + + ++ G+
Sbjct: 720 DDAVFFAYKFDFKCNI-ITVVYSGFVLLIESKLADDVGNTEMDLFLIGKMVKASVSSCGQ 778
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNL--DKLNEILKGLWLRDNLEI------DYLLLPA 242
++L ++++ +RFQ F + K + + LRD YLLLP
Sbjct: 779 VRLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSGAPREFLLRDKTSSLWSPSRMYLLLPL 838
Query: 243 SEQSID-----WEPVASLSFPCDIGLKH-----HKNCSTMSNARVVQTKSGPLCTCM--- 289
+ S D W + + + + K+ ++ SN + T S P+ C
Sbjct: 839 EDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSLNSTGS-PVTDCKETN 897
Query: 290 -------------IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRN-DGGAITYKKHYE- 334
+ N+VV H+G+IY I + A S F D + + YE
Sbjct: 898 IIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAESSFAETVDTVSSEFANFYEY 957
Query: 335 --ERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQ----------REPSKISFELPPE 382
++Y I L + L+ ++ + N L E E + +PPE
Sbjct: 958 FYKKYNIVLKHPGQPLMLLKQSHNPHNLLVNFNDEGVSAKASQAGVVNEKPRFHVHMPPE 1017
Query: 383 LCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT 442
L ++ P+S+ S +PS+MHRL+SL+LA L+ + + C N+ IP+S +LEA+T
Sbjct: 1018 LLLVLDVPVSV--LKSLYLLPSLMHRLESLMLANQLREEI-NFCSSNIDIPSSMILEALT 1074
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
T +C E F +E LE LGDS LKYA S LF Y N HEG LS ++ + N+ L KLG D
Sbjct: 1075 TLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTD 1134
Query: 503 HKLPGFIRTEPFDPKMWMIPGD------------NSGSYELNDHSLFNERKIYV-----T 545
HK+ G+IR FDP+ W+ PG +S L+ + K+ V
Sbjct: 1135 HKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDR 1194
Query: 546 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF--------VNVPYERQF 597
G + + SKT++D VEALIGA+ +GG L + +GI + +N R +
Sbjct: 1195 GHRWLCSKTISDCVEALIGAYYLSGGLVAALHVMKWLGIDAELDPLVVAEVINQASLRTY 1254
Query: 598 QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 657
E + +ES + Y+F L EALTH S L E CYQRLEFLGD+VLD LI
Sbjct: 1255 VPNYE----IHMIESKVGYNFSVKFFLQEALTHES--LHE-SYCYQRLEFLGDSVLDLLI 1307
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
T YLYN + + PG+LTD+RSASVNN+ +A +V+H LHKH+ H S L I+ V SF
Sbjct: 1308 TQYLYNHHTNIDPGELTDLRSASVNNENFAQVAVRHDLHKHLQHCSTLLSNQISEYVQSF 1367
Query: 718 ERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM 777
++T + PKALGD++ES+ GAI +D+ N + V+ + PLL P++TP+ +
Sbjct: 1368 TE--SDNTTRLDPSIKGPKALGDLVESIVGAILIDTNLNLDKVWRIVEPLLSPIVTPDKL 1425
Query: 778 RLQPARELNEYCQKHHFSMKK 798
L P RELNE C + +K+
Sbjct: 1426 ELPPFRELNELCDSLGYFIKE 1446
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV S++QSRGRAR NS++++ML+R
Sbjct: 498 FDLPKTVRSYVQSRGRARQNNSEFIMMLER 527
>gi|224141703|ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
gi|222865638|gb|EEF02769.1| dicer-like protein [Populus trichocarpa]
Length = 1492
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 309/990 (31%), Positives = 443/990 (44%), Gaps = 177/990 (17%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKRYFKPTPKFD----------------INKEM 45
FD TV S++QSRGRAR NS ++ ML+R T + D IN++
Sbjct: 405 FDLPKTVRSYVQSRGRARQNNSHFITMLER--GNTKQRDQLFEIIRSEWSMTDTAINRDP 462
Query: 46 GICTL------------------------YLPNNCPIQTVIAQG--NIKTLKQTACLEAC 79
+ L LP N QT++ N + KQ CLEAC
Sbjct: 463 NVWNLKACASEAAKAYVVDVTGASVTADSSLPPNAAFQTLVGPTCRNQQLAKQLVCLEAC 522
Query: 80 KKLHQIGALTDNLLPDV--------VVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDT 131
KKLHQ+GAL D+LLP V V + + G H L +
Sbjct: 523 KKLHQMGALDDHLLPSVEEPSEIAVVKSKSTSAGAGTTKRKELHGTACIHALSGSWGEKL 582
Query: 132 K-ITYHCYLIELKQNFNYDIPAH---DIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKH 187
T+H Y K +F+ I + +L + ++L+ ++ + DL + + ++
Sbjct: 583 DGATFHAY----KFDFSCSIVSQIYSGFILLIESKLDDDVGNIELDLYLVAKIVKSSISS 638
Query: 188 LGKIQLTPDKVLLCRRFQI----ALFRVIMDHNLDKLNEILKG----LWLRDNLEIDYLL 239
G + L ++ +RFQ LF + + +L+ LW N+ YLL
Sbjct: 639 CGVVHLDAAQMTKAKRFQEFFFNGLFGKLFTGSKSSREFLLQKETTLLWSPSNM---YLL 695
Query: 240 LPASEQSI---DWEPVASLSFPCDIGLKHHKNCSTMSN--------ARVVQTKSGPL--- 285
LP SI DW C I K + CS++ AR PL
Sbjct: 696 LPLEPWSISSNDW---------CKIDWKGIEACSSVVEYLKNSFLAARSYSGGGNPLPDN 746
Query: 286 -------CTCM--------------IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG 324
C I + VV H+G+IY I V+ +A S F N
Sbjct: 747 VQSSTIECNGTNLIHFANALVNVENIKDMVVLAIHTGRIYSIVKVVNDSSAESAFEGNAD 806
Query: 325 GAI---TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQE-------------- 367
TY +++ +RYGI L + LL ++ + N+L E
Sbjct: 807 NVTEFSTYTEYFNKRYGIVLMHPGQPLLRLKQSHNPHNHLVNFNDEGLLVCDSKDGMVGR 866
Query: 368 KQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCM 427
KQ++ +PPEL I P+S+ S +PS+MHRL+ L+LA L+ + H
Sbjct: 867 KQQQ----HVHMPPELLIKIDVPISV--VKSIYLMPSLMHRLECLMLASQLRQEIDCHA- 919
Query: 428 QNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKK 487
N IP+S +LEAITT +C E F +E LE LGDS LKYA S LF Y N HEG LS +
Sbjct: 920 PNFYIPSSLILEAITTLRCCESFSMERLELLGDSVLKYAVSCHLFLKYPNKHEGQLSSWR 979
Query: 488 DRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS---------GSYELN---DHS 535
+ N+ L KLG D K+ G+I FDP+ W PG S G L D
Sbjct: 980 SGAVCNSTLHKLGTDCKVQGYILDSAFDPRRWAAPGQKSVRTPAPCKCGVDTLEVPLDRK 1039
Query: 536 LFNERKIYVTGR------KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV 589
E I G+ + + SKT++D VE++IGA+ +GG + + GI +
Sbjct: 1040 FQTESAIVKVGKPCDSGHRWMGSKTISDCVESVIGAYYVSGGLIAAIHVMKWFGINAELD 1099
Query: 590 NVPYERQFQVQAERLV-----NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
+ R ++ LES L Y+F +L EA+TH S + CYQR
Sbjct: 1100 PSLISEAITSASLRSYIPKEDEIKSLESKLGYTFGVKFVLQEAMTHASIQEQGVTYCYQR 1159
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQ 704
LEFLGD+VLD LIT +LY + + PG+LTD+RSASVNND +A +VK L+ H+LH S
Sbjct: 1160 LEFLGDSVLDLLITWHLYQSHTDVDPGELTDLRSASVNNDNFAQVAVKQNLYTHLLHCST 1219
Query: 705 ELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI 764
L I V+SF ES G T PKALGD+IES++GA+ +D+ N + V+
Sbjct: 1220 LLQSQITEYVNSFH----ESDQG----TKAPKALGDLIESIAGALLIDTKFNLDGVWRIF 1271
Query: 765 RPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVT---VEVHANGTLF 821
+PLL P++TPE + L P REL E C S+ V + KA + + V + L
Sbjct: 1272 KPLLSPIVTPEKLELPPLRELVELCD----SIGVFVKEKCTKKAEMVHAQLWVQLDNELL 1327
Query: 822 KHTHADADKETAKKVASKEVLKSLKASFPG 851
+ +++ AK A+ +LK L+ G
Sbjct: 1328 SGEGYEKNRKAAKGKAASCLLKKLQVCNSG 1357
>gi|359484756|ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 264/863 (30%), Positives = 427/863 (49%), Gaps = 59/863 (6%)
Query: 27 LMLKRYFKPTPKFDINKEMG--ICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKL 82
L+ YF P P+F + G +C + LP++ PI +++ Q +++ K+ ACL+A + L
Sbjct: 587 LLHDEYFNPKPEFYYFDDSGGTVCQINLPSSAPIHQIVSTPQSSMEAAKKDACLKAIQDL 646
Query: 83 HQIGALTDNLLPD-------VVVEEHDAQKHGNEPYDAE-HPIYFPPELVNQCPQDTKIT 134
H +GAL D LLPD +++ D+ +E E H + P L + I
Sbjct: 647 HVLGALNDYLLPDQGNAHEELMLVSSDSDSCEDEDSREELHEMLVPAALKDSWSNLEHIC 706
Query: 135 YHCYLIELKQNFNYDIPAHDIV----LAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLG 189
+ Y I+ IP I L V+ L +E +++ DL + GR + L G
Sbjct: 707 LNSYYIKFTP-----IPEDRIYRKFGLFVKAPLPAEAERMVLDLHLSHGRSVMTELVPSG 761
Query: 190 KIQLTPDKVLLCRRFQIALFRVIMDHNL--DKLNEILKGLWLRDNLEIDYLLLPA----- 242
+ +++L FQ +VI++ ++ ++ + K + + + YLLLP
Sbjct: 762 VTEFDENEILQAHNFQEMYLQVILNRSIFETEIVHLGKSDFCKSSSSTFYLLLPVILNEC 821
Query: 243 -SEQSIDWEPVAS-LSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHS 300
+ ++DW+ + LS P + N + + G + NS+V P+
Sbjct: 822 ENMITVDWQIIRRCLSSPIFRNPADRVDKLPPLNDHL-RLADGVYRESDVINSLVYAPYK 880
Query: 301 GQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNY 360
++++ + N S + + T+K +GI L F ++ LL+ +R+F +N
Sbjct: 881 KAFFFVSRISAGRNGYSPYKDSSHLEYTWKT-----FGIHLEFPKQPLLSAKRLFSLRNL 935
Query: 361 LSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVN 417
L R+ E ++ ++PPELC + + S S + +PSIMHRL++LL+A+
Sbjct: 936 LHN-RKHGSSESHELEEHFMDIPPELCHLKIIGFSKDIGSSVSLLPSIMHRLENLLVAIE 994
Query: 418 LKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQN 477
LKNML + I +VLEA+TT+KC E F LE LE LGD+FLK+A ++LF Y
Sbjct: 995 LKNMLSASFPEGAEITAHRVLEALTTEKCLERFSLERLEVLGDAFLKFAVGRRLFLLYDA 1054
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN-----SGSYELN 532
EG L+ ++ +++N+ L KL L +IR + FDP + G E+
Sbjct: 1055 LDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIRDQSFDPGQFFALGHRCPRICEKETEMA 1114
Query: 533 DHSLFNERKIYVTGRKK----VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 588
HS + K + KT+ADVVEAL+GAF+ G +FL IGI+VDF
Sbjct: 1115 IHSRCGKTPTTEVRCSKCHHWLHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGIQVDF 1174
Query: 589 -----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ 643
+N +Q +V LE LL + F LL++A+ H SY CYQ
Sbjct: 1175 EAFQVINACISSTSYMQLASSTDVPALEKLLGHEFLHKGLLLQAIVHPSYN-KHGGGCYQ 1233
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS 703
RLEFLGDAVLDYLIT YLY+ YP L PG +TD+RS SVNN +A +V LH+ ++ +
Sbjct: 1234 RLEFLGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICDA 1293
Query: 704 QELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFES 763
L + I VD +L+ PKALGD++ES GAI +D G + +
Sbjct: 1294 SSLSEAIKKYVDFIRTPTLDKDL--HEGPKCPKALGDLVESCMGAILLDKGFDLNHAWNI 1351
Query: 764 IRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKH 823
+ +L+ +++ ++L P REL E CQ H++ ++ + + G V +V +
Sbjct: 1352 MLSILDRIMSFSDLQLNPIRELQELCQHHNWDLQFPTSKQ-GGTFLVEAKVSGDDICTTA 1410
Query: 824 THADADKETAKKVASKEVLKSLK 846
+ +A+++ A+++AS ++ K LK
Sbjct: 1411 SATNANRKDARRIASNQLFKKLK 1433
>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 275/881 (31%), Positives = 426/881 (48%), Gaps = 91/881 (10%)
Query: 32 YFKPTPKFD-INKEMGI-CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGA 87
YF P P F ++ GI C + LP+N PI ++ Q +++ K+ ACL+A ++L+ +GA
Sbjct: 593 YFDPKPSFHYLDDSGGISCHITLPSNAPINQILGTPQLSMEASKREACLKAIEELYNLGA 652
Query: 88 LTDNLLPDVVVEEHDAQKHGNEPYDAEH------------PIYFPPELVNQCPQDTKITY 135
L+D LLP E + Q G+ D P F +N+ D +
Sbjct: 653 LSDCLLPKQDDAEPEVQVSGSSDEDESDAISRGKLHEMLVPSAFGQSWINE---DNIVRL 709
Query: 136 HCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNL-KHLGKIQLT 194
+ Y I+ + D + L + T L E +K+ DL + GR + + G ++
Sbjct: 710 NSYYIKFCP-YPEDRVYKEFGLFMMTCLPMEAEKLELDLHLAHGRSVMTMFVPFGVVEFN 768
Query: 195 PDKVLLCRRFQIALFRVIMDHNLDKLNEILK-GLWLRDNLEID--YLLLPASEQS----- 246
D++ + FQ ++I+D L+ ++E + G+ + YLLLP Q
Sbjct: 769 KDEIKMAENFQEMFLKIILDR-LEFISEFVDLGMSAESHSGTSTFYLLLPVVLQEYGNAM 827
Query: 247 -IDWE-------------PVASLS---FPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCM 289
+DW+ P ++ FP DI L+ ++ N
Sbjct: 828 EVDWKIVKRCLCSPIFRHPADTMDKKVFPLDIHLQLANGYRSVRN--------------- 872
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLL 349
+ NS+V PH Y++T V + N ND G +Y ++ E++ I L ++ LL
Sbjct: 873 VENSLVYAPHKKNFYFVTNV--NYEKNGYSPHNDSGTSSYVDYFIEKFSIHLKCPKQPLL 930
Query: 350 NGRRIFHAQNYLSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVPSIM 406
+ + + + N L R+ + EP ++ LPPELC + + S S + +PSIM
Sbjct: 931 HVKPVSNLHNLLHN-RKREDAEPQELDEYLIYLPPELCELKVIGFSKDIGSSISLLPSIM 989
Query: 407 HRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYA 466
HRL +LL+A+ LK+ML + I +VLEA+TT+KCQE F LE LE LGD+FLK+A
Sbjct: 990 HRLGNLLVAIELKHMLSSSFPEAAEISAIRVLEALTTEKCQERFSLERLEVLGDAFLKFA 1049
Query: 467 ASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG--- 523
++ F + + HEG L+ ++ ++N+ L KL L +I + FDP + G
Sbjct: 1050 VARHFFLMHDSLHEGDLTKRRSNAVNNSNLFKLAIKRNLQVYICDQTFDPTQFYALGRPC 1109
Query: 524 ------DNSGSYELNDHSLFNERKIYVTGRKK----VKSKTVADVVEALIGAFLSTGGEN 573
+ S +S+ + K T K + KT+ADVVEAL+GAFL G
Sbjct: 1110 PRVCSNETEESIHFCLNSVMQQGKATETRCSKNHHWLHRKTIADVVEALVGAFLVDSGFK 1169
Query: 574 VGLIFLDRIGIKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEAL 628
+ FL IGI+VDF V++ V++ LE L + F LL++A
Sbjct: 1170 AAIAFLSWIGIQVDFEASQVVDICIASASYSPLSSEVDIPSLEGKLGHHFFHKGLLLQAF 1229
Query: 629 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL 688
H SY CYQRLEFLGDAVLDYLIT YL++ YP L PG LTD+RS SVNN +A
Sbjct: 1230 VHPSYNKLG-GGCYQRLEFLGDAVLDYLITSYLFSAYPKLKPGQLTDLRSLSVNNKAFAC 1288
Query: 689 SSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGA 748
+V +L S L + I VD R S G + PKALGD++ES GA
Sbjct: 1289 LAVDRSFDNFLLCDSSGLSEAIKKYVDYVRRPV--SDNGIKEGPKCPKALGDLVESCVGA 1346
Query: 749 IFVDSGCNKEVVFESIRPLLEPMIT-PETMRLQPARELNEYCQKHHFSMKKTVAP-RING 806
I +DSG N V++ + L+P++ +++L P R+L E CQ H+ ++ P ++
Sbjct: 1347 ILLDSGFNLNKVWKIMTSFLDPIMKFSSSLQLSPVRDLRELCQSHNLELEFLPVPSKLTK 1406
Query: 807 KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+ +V +V NG + +K+ A ++AS+ + KA
Sbjct: 1407 RFSVEAKVSGNGVCETASATGQNKKEACRIASQLLFLKFKA 1447
>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
Length = 1633
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 265/866 (30%), Positives = 431/866 (49%), Gaps = 70/866 (8%)
Query: 32 YFKPTPKFDINKEMG--ICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGA 87
YF P P+F ++G IC + LP N P+ ++ Q + + K+ ACL+A ++LH++G+
Sbjct: 596 YFDPKPQFFFFDDLGGTICHIILPANAPVHQIVGTPQSSREAAKKDACLKAIEQLHKLGS 655
Query: 88 LTDNLLPDVVVEEHDAQKHGNEPYDAEH------------PIYFPPELVNQCPQDTKITY 135
L++ LLP ++ +EP + E P F L + + I
Sbjct: 656 LSNFLLPHEKDVNEESMLASSEPENNEGEGVRGELHEMLVPAVFKESLTSS---ENWINL 712
Query: 136 HCYLIELKQNFNYDIPAHDIV----LAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGK 190
H Y I+ +P I L +R L E +++ +L + GR + L LG
Sbjct: 713 HSYFIKF-----CPVPEDRIYKKFGLFIRAPLPLEAEQMELNLHLACGRYVATKLVPLGC 767
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHN--LDKLNEILKGLWLRDNLEIDYLLLP------A 242
+ D++ FQ +VI+D + + + + K + + YLLLP
Sbjct: 768 LAFHRDEITQAIYFQEMFLKVILDRSDFVPEFVTLGKNSFFESSPSF-YLLLPVLLCDHG 826
Query: 243 SEQSIDWEPVAS-LSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSG 301
+ ++DWE V LS P ++ K C + + +Q +G I NS+V PH
Sbjct: 827 NRVTVDWETVGRCLSSPVFRCVE--KEC--LPSDDCLQLANGCRSIRDIENSLVYIPHKK 882
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYL 361
Y+IT + NA S +Y + +R+GIQL + ++ LL + +F N L
Sbjct: 883 HFYFITNIDRGKNARS--PHKCSSTSSYMEFLIQRFGIQLKYPEQPLLQAKPLFSLHNLL 940
Query: 362 SKCRQEKQ--REPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK 419
R+E +E + + PPELC + + S S + +PSIMHRL++LL+A+ LK
Sbjct: 941 HNRRKEDSVTQELDEYLIDFPPELCELKIIGFSKDIGSSISLLPSIMHRLENLLVAIELK 1000
Query: 420 NMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHH 479
++L + + ++LEA+TT++CQE LE LE LGD+FLK+A + LF +
Sbjct: 1001 SLLSASFSEGAEVTAYRILEALTTERCQERLSLERLEILGDAFLKFAVGRHLFLLHDTLD 1060
Query: 480 EGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG---------DNSGSYE 530
EG L+ K+ ++N+ L KL L +IR +PFDP+ + G ++ GS
Sbjct: 1061 EGELTRKRSNAVNNSNLLKLASRRNLQVYIRDQPFDPRQFFALGHPCPVICTKESEGSIH 1120
Query: 531 LNDHS--LFNERKIYV---TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK 585
++ S E I V G + KT+ADVVEAL+GAF+ G FL +GI+
Sbjct: 1121 SSNRSNAKGQENTIEVRCSRGHHWLYKKTIADVVEALVGAFIVDSGFRAATAFLKWLGIR 1180
Query: 586 V-----DFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 640
V D V + + ++V LE L++ F + L+++A H SY
Sbjct: 1181 VNIEASDVTKVCLASRTFMPLAPSIDVSSLEDSLDHQFVNRGLVLQAFVHPSYN-KHGGG 1239
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
CYQRLEFLGDAVLDYLIT YL++ YP L PG LTD+RSA VNN +A+ +V ++ ++
Sbjct: 1240 CYQRLEFLGDAVLDYLITSYLFSVYPKLKPGLLTDLRSALVNNRAFAIVAVDRSFNEFLI 1299
Query: 701 HASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
S L + I V+ +R ++E E PK LGD++ES GAIF+D+G + +
Sbjct: 1300 CDSGNLSEAIETYVNFVKRPAVEKD-SLEGPKC-PKVLGDLVESCIGAIFLDTGFDLNCI 1357
Query: 761 FESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTL 820
++ + L+P++ + L P REL+E+C+ H + ++ R + V +V
Sbjct: 1358 WKLMLSFLDPILNSSNVLLNPFRELHEFCESHKWKLQFPTLKR-DMNFLVEAKVTGKDIC 1416
Query: 821 FKHTHADADKETAKKVASKEVLKSLK 846
+ +++K+ A ++AS++++ LK
Sbjct: 1417 LDASANNSNKKEAIRIASEQIIVKLK 1442
>gi|242033789|ref|XP_002464289.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
gi|241918143|gb|EER91287.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
Length = 462
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 201/456 (44%), Positives = 277/456 (60%), Gaps = 20/456 (4%)
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
M P+S +T +SF+FVPSIM+R+Q LLL+ LK + L MQ I K+LEA+TTK+CQ
Sbjct: 1 MAPVSANTLFSFSFVPSIMYRIQCLLLSAKLK-VQLGPRMQQFNITAMKILEALTTKECQ 59
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
E F LESLETLGDSFLKY Q LF Y + E +L+ + +SN ALC+L C ++ G
Sbjct: 60 EKFSLESLETLGDSFLKYVTGQDLFSKY-TYREDMLTSMRGEKVSNPALCQLACKSEIVG 118
Query: 508 FIRTEPFDPKMWMIPG---DNSGSYELNDHSLF-NERKIYVTGRKKVKSKTVADVVEALI 563
+IR E F PK W IPG D G N+ LF +Y +KSK +AD VEAL
Sbjct: 119 YIRGELFSPKKWTIPGLGYDTRG----NNKVLFRTTNDMYSLDEIPIKSKRIADTVEALT 174
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPS 622
GA+LS GE + F+ +G+ V+ + ER ++E ++V L++++ Y F D S
Sbjct: 175 GAYLSACGELAAVHFIKSLGMDVELHSKMQVERIVSTKSEEFIDVESLQTIIGYVFDDSS 234
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK-YPTLSPGDLTDMRSASV 681
LL+EALTH SY I C +RLEFLGDAVLDY++T Y Y K YP +P LT++R ASV
Sbjct: 235 LLIEALTHSSYNTAGITTCNERLEFLGDAVLDYILTDYFYRKYYPKCTPALLTNLRKASV 294
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDI 741
NN CYA ++VK GLHKHILH+S K + ++S S S GWE P+ L D+
Sbjct: 295 NNWCYAHAAVKAGLHKHILHSSS---KQMIKDLESSGPFSGPS-HGWEPGIGLPEDLADL 350
Query: 742 IESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVA 801
E+++GAI+VDSG +KE V+ ++R LL P+ TPET+ L P EL E C+ ++ + +
Sbjct: 351 FEAIAGAIYVDSGNDKEAVWRAMRRLLVPLATPETILLDPVSELKELCEHKNYP-EPWYS 409
Query: 802 PRINGKAAVT---VEVHANGTLFKHTHADADKETAK 834
P + A VT +V A G + T +++ A+
Sbjct: 410 PTRDDAAGVTRVVAKVKAAGREYSDTGEGPNQDVAE 445
>gi|255550219|ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
gi|223544646|gb|EEF46162.1| Ribonuclease III, putative [Ricinus communis]
Length = 1660
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 271/902 (30%), Positives = 439/902 (48%), Gaps = 106/902 (11%)
Query: 31 RYFKPTPKFDIN--KEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIG 86
RYF P P F+ ++ C + LP + QT++ + + KQ ACLEACK+LHQ+G
Sbjct: 616 RYFTPRPTFEFECFEQSFQCKMMLPASAAFQTIVGPVCRSQQLAKQLACLEACKQLHQMG 675
Query: 87 ALTDNLLPDV---VVEEHDAQKHGN---------EPYDAEHPIYFPPELVNQCPQDTK-I 133
AL D+LLP V ++H ++ G+ + PI+ L ++
Sbjct: 676 ALDDHLLPSVEEPTEDDHTVRRKGSLAGAGTTKRKELHGTTPIH---ALSGSWGENLDGA 732
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
T+H Y E + + + I+L + ++L+ ++ + DL + R + ++ G++ L
Sbjct: 733 TFHAYKFEFSCSIVSEKYSGYILL-IESKLDDDVGNIELDLFLVRKTVRASVSSCGQVHL 791
Query: 194 TPDKVLLCRRFQIALFRVIMDHNLDK-----------LNEILKGLWLRDNLEIDYLLLP- 241
++++ + F F + L + LW+ N+ YLLLP
Sbjct: 792 DAEQMMKAKCFHELFFNALFGKLFSGSKSSRSPREFLLQKETSLLWILSNM---YLLLPL 848
Query: 242 -----ASEQS--IDWEPVAS-------LSFPCDIGLKHH------KNCSTMSNARVVQTK 281
+S++S I+W V L C +G +H+ + + S V
Sbjct: 849 EAFSASSDESWKINWRGVNGCSNVVEFLKKNCFLGAEHYNGERVRSSVTECSGGNAVHFA 908
Query: 282 SGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA----ITYKKHYEERY 337
+ + + + VV H+G+IY + V+G +A S F +N GGA T+ +++ ++Y
Sbjct: 909 NISVDVERVKDMVVLAIHTGKIYSVVEVVGDASAESPFEQNVGGAPSKFSTFSEYFNKKY 968
Query: 338 GIQLCFDQELLLNGRRIFHAQNYLSKCRQE---------KQREPSKISFELPPELCRIIM 388
GI L ++ LL ++ N L+ ++ KQR+ ++ +PPEL I
Sbjct: 969 GIVLLRPRQPLLLLKQSHKPHNLLNPPDEDTLKDGLVVAKQRQFAR----MPPELLVSID 1024
Query: 389 GPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQE 448
P + T S +PS+M+RL+SL+LA L+ + + N IP+ +LEAITT + E
Sbjct: 1025 VP--IQTLKSSYLLPSLMYRLESLMLASQLRQEIACQ-VSNFHIPSLLILEAITTPRSCE 1081
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
+E LE LGDS LKY+ S LF Y HEG LS ++ R + N+ L +LG KL G+
Sbjct: 1082 KVSMERLELLGDSVLKYSVSCDLFLRYPTKHEGQLSAQRTRAVCNSTLHQLGIGCKLQGY 1141
Query: 509 IRTEPFDPKMWMIPGDNSGSY------------ELNDHSLFNERKIYVT-----GRKKVK 551
IR F P+ W+ PG Y L+ + K+ + G + +
Sbjct: 1142 IRDSAFIPRYWVAPGQQPAFYVSCTCGVDTLEVPLDAKFQTEDPKVQIAICCSKGHRWMC 1201
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN----- 606
SKT++D VEA+IGA+ +GG L + +G+ V+F ++ + + R
Sbjct: 1202 SKTISDCVEAVIGAYYVSGGLMAALHVMQWLGMDVEFDPSLVDKIIKTASVRSYTPKEDE 1261
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
++ +ES L Y+F LL EA+TH S I CYQRLEFLGD+VLD LIT +LY +
Sbjct: 1262 IKGIESKLGYTFSVKFLLQEAMTHASMQEQGIGYCYQRLEFLGDSVLDLLITWHLYQNHT 1321
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
++ PG+LTD+RSA V+N+ +A V+ L+KH+ H S L I ++SF
Sbjct: 1322 SMDPGELTDLRSACVSNENFAQVVVRRDLYKHLQHCSTLLLSQIKEYLESFHE---SDEV 1378
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELN 786
+ PKALGD++ES++GA+ +D+ N + V+ PLL P+ TP+ + L P REL
Sbjct: 1379 AKATGPKGPKALGDLLESIAGAMLIDAKLNLDEVWRIFMPLLSPLATPQNLELPPLRELM 1438
Query: 787 EYCQKHHFSMKKTVAPRINGKAAVTVE--VHANGTLFKHTHADADKETAKKVASKEVLKS 844
+ C + +K+ IN V E + N L D ++ AK A+ +LK
Sbjct: 1439 QLCNSLGYFIKEKC---INNNDIVHAELRLQLNDVLLVGNGCDRSRKAAKGKAATHLLKK 1495
Query: 845 LK 846
L+
Sbjct: 1496 LE 1497
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVC + QSRGRAR +S Y++ML+R
Sbjct: 514 FDLPKTVCCYAQSRGRARQNDSQYIIMLQR 543
>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 270/871 (30%), Positives = 424/871 (48%), Gaps = 70/871 (8%)
Query: 32 YFKPTPKFD-INKEMGI-CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGA 87
YF P P F ++ GI C + LP+N PI ++ Q +++ K+ ACL+A ++L+ +G
Sbjct: 594 YFDPKPCFYYLDDSGGISCHITLPSNAPINQILGTPQLSMEASKRDACLKAIEELYNLGT 653
Query: 88 LTDNLLPDVVVEEHDAQKHGN-------------EPYDAEHPIYFPPELVNQCPQDTKIT 134
L+D LLP E +AQ G+ E ++ P F +N+ D +
Sbjct: 654 LSDCLLPKQDDAEPEAQVSGSSDEDECEDAISRGELHEMLVPSAFGQSWINE---DNIVR 710
Query: 135 YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQL 193
+ Y I+ + D + L + L E +K+ DL + GR + G ++
Sbjct: 711 LNSYYIKFCP-YPEDRVYKEFGLFIMVRLPMEAEKLELDLHLAHGRSVMTKFVPFGVVEF 769
Query: 194 TPDKVLLCRRFQIALFRVIMDHNLDKLNEILK---GLWLRDNLEIDYLLLPASEQS---- 246
D++ + FQ ++I+D L+ ++E + G YLLLP Q
Sbjct: 770 DKDEIKMAENFQEMFLKIILDR-LEFVSEFVDLGMGAESHTGTSTFYLLLPVVLQEYGNA 828
Query: 247 --IDWEPVASLSFPCDIGLKHHKNCSTMSNARV-----VQTKSGPLCTCMIYNSVVCTPH 299
+DW+ V C +H + TM +Q +G + NS+V PH
Sbjct: 829 MKVDWKTVKRCL--CSPIFRHPAD--TMDKKVFPLDIHLQLANGYRSVRDVENSLVYAPH 884
Query: 300 SGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQN 359
Y++T V + N ND G +Y ++ E++ I L ++ LL+ + + + N
Sbjct: 885 KKNFYFVTNV--NYQKNGYSPHNDSGTSSYVDYFIEKFSIHLKCPEQPLLHVKPVSNLHN 942
Query: 360 YLSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAV 416
L R+ + EP ++ LPPELC + + S S + +PSIMHRL +LL+A+
Sbjct: 943 LLHN-RKHEDAEPQELDEYLIYLPPELCELKIIGFSKDIGSSISLLPSIMHRLGNLLVAI 1001
Query: 417 NLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
LK+ L + I +VLEA+TT+KCQE F LE LE LGD+FLK+A ++ F +
Sbjct: 1002 ELKHRLSSSFPEAAEISALRVLEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLMHD 1061
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG---------DNSG 527
+ HEG L+ ++ ++N+ L KL L +I + FDP + G +
Sbjct: 1062 SLHEGDLTKRRSNAVNNSNLFKLAIKRNLQVYICDQTFDPTQFYALGRPCPRLCSNETKE 1121
Query: 528 SYELNDHSLFNERKIYVTGRKK----VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
S +S+ + K+ T K + KT+ADVVEAL+GAFL G + FL IG
Sbjct: 1122 SIHFCLNSVKEQGKVTETQCNKNHHWLHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIG 1181
Query: 584 IKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 638
I+VDF V++ + V++ LE L + F LL++A H SY
Sbjct: 1182 IQVDFEASQVVDICIASASYLPLSSEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLG- 1240
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
CYQRLEFLGDAVLDYLIT Y+++ YP L PG LTD+RS SVNN +A +V K
Sbjct: 1241 GGCYQRLEFLGDAVLDYLITSYVFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDKF 1300
Query: 699 ILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKE 758
+L S L + I VD R +++ + PKALGD++ES GAI +DSG N
Sbjct: 1301 LLCDSSGLSEAIKKYVDYIRRPVSDNSI--KEGPKCPKALGDLVESCVGAILLDSGFNLN 1358
Query: 759 VVFESIRPLLEPMIT-PETMRLQPARELNEYCQKHHFSMKKTVAP-RINGKAAVTVEVHA 816
V++ + L+ ++ +++L P R+L E CQ H+ ++ P ++ + +V +V
Sbjct: 1359 KVWKIMTSFLDSIMKFSSSLQLSPVRDLRELCQSHNMELEFLPVPSKLTKRFSVEAKVSG 1418
Query: 817 NGTLFKHTHADADKETAKKVASKEVLKSLKA 847
NG + +K+ A ++AS + KA
Sbjct: 1419 NGVCETASATGQNKKEACRIASLLLFSKFKA 1449
>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
Length = 1604
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 271/859 (31%), Positives = 426/859 (49%), Gaps = 80/859 (9%)
Query: 32 YFKPTPKF-DINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F I+ GI C L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 575 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 634
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 635 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 691
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKI 191
Y+ I + ++ Y + ++ + E E+ L + L H K
Sbjct: 692 LHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAET---------------LQMMLAH--KF 734
Query: 192 QLTPDKVLLCR-RFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLL--PASEQSID 248
Q K+LL R F ++ D L+ + L ++ D ++ PA E+ +
Sbjct: 735 QEMCLKILLDRSEFTSPHVKLGNDVTLEINSTFYLLLPIKQKCYGDRFMIDWPAVERCLS 794
Query: 249 WEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITG 308
P+ P D+ + H + S+ + R++ G + SVV +PH+ +++ G
Sbjct: 795 -SPI--FKDPIDVSV--HASYSSNESLRLLD---GIFSKTDVVGSVVFSPHNNIFFFVDG 846
Query: 309 VLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNY----LSKC 364
+L +NA S + TY +H++ER+ I+L ++ LL ++IF+ +N L +
Sbjct: 847 ILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPET 901
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
+ + RE + ELPPELC + + S S + +PS+M+RL++LL+A+ LK+++L
Sbjct: 902 TESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLS 961
Query: 425 HCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
+ I S +LEA+TT+KC E LE E LGD+FLKY + F TY+ EG L+
Sbjct: 962 SFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLT 1021
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL-FNERKIY 543
++ +++N+ L +L KL +IR + F+P + PG D + ++ I+
Sbjct: 1022 RRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDIH 1081
Query: 544 VTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 592
R+ + K +ADVVE+LIGAFL GG FL IGI VDF N
Sbjct: 1082 PDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPA 1141
Query: 593 YERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
R + L ++ LE L+ Y F+ LL++A H S+ CYQRLEF
Sbjct: 1142 LYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-QHSGGCYQRLEF 1200
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +HKH++ S L
Sbjct: 1201 LGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLT 1260
Query: 708 KWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
I+ + + +LS S E + PKALGDI+ES GA+ +DSG N V++ + L
Sbjct: 1261 SAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLML 1318
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHAD 827
L+P++T M P REL E CQ H F + + +G+ V VEV+ + T A+
Sbjct: 1319 LKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICTAAN 1378
Query: 828 ADKETAKKVASKEVLKSLK 846
+ + A+K A++E L LK
Sbjct: 1379 RNSKAARKFAAQETLSKLK 1397
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+++L+R
Sbjct: 476 FDLPETVASFIQSRGRARMTKSKYVVLLER 505
>gi|221361577|emb|CAX18337.1| dicel-like 2 [Nicotiana benthamiana]
Length = 224
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/224 (74%), Positives = 185/224 (82%)
Query: 432 IPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
IPT+KVLEAITTKKC E FHLESLETLGDSFLKYAAS QLFKTY+NHHEGLL+VKK+ II
Sbjct: 1 IPTAKVLEAITTKKCVEKFHLESLETLGDSFLKYAASIQLFKTYENHHEGLLTVKKNSII 60
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVK 551
SNAALCKLGC K+PGFIR EPFD K W+IPGDNS Y ++ L K+Y GR+K K
Sbjct: 61 SNAALCKLGCARKIPGFIRNEPFDLKGWLIPGDNSQVYNFDEEVLMPSVKMYSRGRQKTK 120
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLE 611
SK VADVVEALIGAFLS+GGE L F+ +GI +DFV+ P R F + AE+LVNVR+LE
Sbjct: 121 SKRVADVVEALIGAFLSSGGEVAALSFMKWLGIDIDFVDAPSPRHFPMNAEKLVNVRYLE 180
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 655
SLL+Y F DPSLLVEALTHGSYMLPEIPRCYQRLEFLGD VLDY
Sbjct: 181 SLLHYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDVVLDY 224
>gi|168039663|ref|XP_001772316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676303|gb|EDQ62787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1275
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 271/881 (30%), Positives = 421/881 (47%), Gaps = 98/881 (11%)
Query: 32 YFKPTPKFDINKE-MGI-CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGA 87
++ PTP+F +++ G+ CT+ LP + +Q+V + + K+ ACL AC++L+ GA
Sbjct: 89 FYTPTPQFSYSEDGSGVKCTIKLPTDALVQSVEGRPVSSQADAKRVACLIACERLYDAGA 148
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQD-TKITYHC 137
LT+ LL D + E ++ G +P + I P + H
Sbjct: 149 LTELLLLKSKENAYSLDAIAPESNSTT-GRDPLPSRS-IIVPDAFSGTWGSGLNSVELHA 206
Query: 138 YLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLK--HLGKIQLTP 195
Y I N D + L + ++ E + +L++ RL VN K G I P
Sbjct: 207 YAISFVATPN-DRAYVNFGLFLEADMGPEAGSIEVELQLSNRRL-VNAKCSPCGTILFEP 264
Query: 196 DKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ------SIDW 249
D++ + FQ +F ++D N L G W + L YLLLP E+ SIDW
Sbjct: 265 DQLRNAKSFQERIFSSVLDQKPPVPNIELSGEWNSNRL---YLLLPLKEKQDALPLSIDW 321
Query: 250 EPVASLSFPCDIGLKHHKNC-STMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQ--IYYI 306
+ + L G + S + + +++ G + NS++ T H+G+ +Y
Sbjct: 322 DCIEDLISDVMKGYNTLEEVPSEIPRSSLLRLIDGYFPVEHVTNSLIQTEHTGKRCLYCA 381
Query: 307 TGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKC-- 364
++ +N S +Y +Y +++ L F ++ +L + + N L++
Sbjct: 382 RELIPDMNGQSPMIMKVSKYNSYSDYYLKKHNRTLNFVEQPMLKAKPLIQVNNLLTQRTT 441
Query: 365 --RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 422
R + + ++ ELP ELC+I++ +S + + +PS MHRL+ LLLAV + L
Sbjct: 442 SERPAAEEQKTESLVELPLELCKIMVKGLSCALTNGISLLPSFMHRLEGLLLAVQFRKSL 501
Query: 423 LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
+ +P + +LEAITT KCQE F LE LE LGD+FL+ + S++LF + EG
Sbjct: 502 --PSPHSSPVPANLMLEAITTSKCQESFSLEGLELLGDAFLEVSVSERLFLLHNRLDEGE 559
Query: 483 LSVKKDRIISNAALCKLGCDHKL-------------------------PGFIRTEPFDPK 517
LS ++ +I N L +LG + + +IR F PK
Sbjct: 560 LSKRRTNLICNKMLERLGRERGIMVSKSCRDTTRSTYKQFEIMINLVSENYIRDTQFSPK 619
Query: 518 MWMIPGDNSGSYELNDHSLFNERKIYVTGRK--KVKSKTVADVVEALIGAFLSTGGENVG 575
W PG ++ T K ++ KT+ADV EALIGA GG
Sbjct: 620 EWATPG-----------------RVRETQCKLPPLQGKTIADVFEALIGAHYIHGGVEAA 662
Query: 576 LIFLDRIGIKVDFVNVPYER-------QFQVQAERLVNVRHLESLLNYSFRDPSLLVEAL 628
+ +G +V + E Q ++ +E V LE LLNY F++ LLVEAL
Sbjct: 663 QAMMGWLGCEVGVSSSIREEARTRVHGQLELLSE--AKVSELEILLNYKFQNKGLLVEAL 720
Query: 629 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL--SPGDLTDMRSASVNNDCY 686
TH S CYQRLEFLGDAVLD+LIT + Y L PG LTD+RSA+VNN+C+
Sbjct: 721 THASCRR-HSGDCYQRLEFLGDAVLDFLITKHFYANSANLKRDPGLLTDLRSAAVNNECF 779
Query: 687 ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLS 746
A +V+H LH ++LH S +L ++ V + GW + S PK L D++ESL+
Sbjct: 780 ARVAVRHNLHLYLLHNSSDLAARVDKYVHG--STTDAQCHGWNGD-SGPKVLSDLVESLA 836
Query: 747 GAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPR-IN 805
GA+F+DSG + V+ + LL+P++TP T+RL+P REL E CQ F R
Sbjct: 837 GAVFLDSGYKLDTVWNVFKQLLKPLVTPATLRLEPIRELWELCQTEKFGEPNYKKKREAM 896
Query: 806 GKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
G +TV V D+++A+KVA+ + L++LK
Sbjct: 897 GDFDMTVTVELKDETITGVGRKPDEKSARKVAAIQALETLK 937
>gi|242059623|ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
gi|241930932|gb|EES04077.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
Length = 1651
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 277/862 (32%), Positives = 411/862 (47%), Gaps = 131/862 (15%)
Query: 31 RYFKPTPKFDIN--KEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
+Y+ P P F + CT+ LP++ Q ++ N++ KQ CL+ACK+LHQ+G
Sbjct: 602 KYYTPRPTFQFTHYGDGYECTVTLPSSAMFQLLVGPKARNMQKAKQLVCLDACKRLHQLG 661
Query: 87 ALTDNLLPDV---------------VVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDT 131
AL D+L P V + HG + + + V + Q
Sbjct: 662 ALDDHLSPSVEETPLEISSKSSISTSGTTKRKELHGTTKVLSMSGSWGSDKSVTKL-QGY 720
Query: 132 KITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKI 191
K+ + C ++ K D VL + T + E +N DL + + ++ G +
Sbjct: 721 KLNFVCDQVDQKYC--------DFVLLIDTSIAKEAATLNIDLYLHDKMVKASVSPCGPL 772
Query: 192 QLTPDKVLLCRRFQIALF-----RVIMDHNLDKLNE--ILKG----LWLRDNLEIDYLLL 240
+L ++ + FQ LF ++ + K ILK LW ++N+ YLLL
Sbjct: 773 ELDARQMEKTKLFQALLFNGLFGKLFIGSKASKTPREFILKKDDAFLWNKENM---YLLL 829
Query: 241 PASEQS-------IDWEPVASLSFPCDI--------------GLKHHKNCSTMSNARVVQ 279
P I+W V + + L H KN
Sbjct: 830 PVDSTQDSHKSVCINWSIVDIAATTVGLMRSIYSDGKHNLKDKLNHEKNDENFIRLANKS 889
Query: 280 TKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFT----RNDGGAITYKKHYEE 335
K+ L N VV H+G+IY + V L ANS F + + T+ +++E+
Sbjct: 890 CKADDL-----KNMVVLAIHTGKIYTVLKV-SDLCANSKFDGTSDKKEAKFQTFAEYFEK 943
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLS-KCRQE-------------KQREPSKISFELPP 381
+Y I LC + LL + + N LS K R E K R S + +PP
Sbjct: 944 KYNIFLCHPLQPLLVLKPTHNPHNLLSSKNRDEGIILFFVGNVVENKNRANSLV--HMPP 1001
Query: 382 ELCRIIMGPMS-LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEA 440
EL + P+ L FY F PS+MHRL+SL+LA L++ + + I + +LEA
Sbjct: 1002 ELLIPLDLPVDVLRVFYLF---PSLMHRLESLMLASQLRSEI---AYTDSDISSFVILEA 1055
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
ITT +C E F +E LE LGDS LKYA S LF T+ N HEG LS ++ I NA L +LG
Sbjct: 1056 ITTLRCCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLYRLG 1115
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGS-----------------YELNDHSLFNERKIY 543
+ ++ G+IR FDP+ W+ PG S + ++D S+ K
Sbjct: 1116 TERRIQGYIRDAAFDPRRWLAPGQLSSRPCPCECPVKSEVITEDIHRIDDKSIIIG-KAC 1174
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER 603
G + + SKT++D VEA+IGA+ GG L + I+ E + ++A
Sbjct: 1175 DKGHRWICSKTISDCVEAIIGAYYVEGGLKAAFAVLKWLQIET------LEEEQIMEALS 1228
Query: 604 LVNVRH----------LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+VR+ LE+ L Y+F+ LL+EALTH S CYQRLEFLGDAVL
Sbjct: 1229 SASVRNYLPKVDVVEFLEAKLGYTFQVKGLLIEALTHPSQQESGATYCYQRLEFLGDAVL 1288
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D LIT +L+ + G+LTD+RSASVNN+ +A +VKH LH+ + H+S L I
Sbjct: 1289 DILITRHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEY 1348
Query: 714 VDSFERLSLESTFGWESETSF-PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
V+S E S++ T S S PK LGDI+ES++GAI +DS + ++V+ +PLL P++
Sbjct: 1349 VNSLEGSSMDRTSLLSSGPSRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFKPLLSPIV 1408
Query: 773 TPETMRLQPARELNEYCQKHHF 794
TPE + L P RELNE+C K+ +
Sbjct: 1409 TPENLELPPFRELNEWCDKNGY 1430
>gi|414871005|tpg|DAA49562.1| TPA: hypothetical protein ZEAMMB73_299457 [Zea mays]
Length = 1440
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 277/904 (30%), Positives = 434/904 (48%), Gaps = 103/904 (11%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RY+ P P F++ + G CTL +P+N ++++ + KQ CLEACKKLH++G
Sbjct: 539 RYYLPKPCFEVGLKDGSYQCTLTMPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELG 598
Query: 87 ALTDNLLP------DVVVEEHDAQ---KHGNEPYDAEHPIYFPPELV-NQCPQDTKITYH 136
L D+L+P D+ + D + G H L N + + +
Sbjct: 599 ELDDHLVPLTEEPMDIDTDTTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESETVILN 658
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTP 195
Y + + + ++ A VL + + L+ ++ + DL + ++ + GKIQL
Sbjct: 659 AYTFDFRCDQEGELYA-GFVLLMESVLDDDVARSEIDLFLIPNKMVYTTMTPCGKIQLNK 717
Query: 196 DKVLLCRRFQIALF-----RVIMDHNLDKLNE---ILKG---LWLRDNLEIDYLLLPASE 244
+++ + FQ F R+ D+L KG W DN+ YLLLP
Sbjct: 718 EQLCKGKLFQEFFFNGIFGRLFHGSRTDELQREFIFTKGHEIQWGSDNM---YLLLPLRN 774
Query: 245 QS-------IDWEPVASLS---------FPCDIGLKHHKNCSTMSNAR---VVQTKSGPL 285
S I WE V S S + D L H CS + + ++ + L
Sbjct: 775 SSQIQHDPNIYWEAVESCSGTVEQLRNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSL 834
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAIT----YKKHYEERYGIQL 341
+ +SVV + H+G+IY + ++ A+ F G + + +Y ++YGI +
Sbjct: 835 HFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSFDEMYNGKASPFASFVDYYHQKYGIVI 894
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCRQEKQR-------EPSKISFELPPELCRIIMGPMSL 393
+ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 895 QHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVAT 952
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IPTSKVLEAITTKKCQEG 449
SF +PS+MHR+QSL+LA L++ N++ IP+S +LEAITT +C E
Sbjct: 953 DILKSFYLLPSVMHRVQSLMLASQLRS--------NISYIQRIPSSLILEAITTLRCCES 1004
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F LE LE LGDS LKY LF Y HEG LS + + + NA L K G L G+I
Sbjct: 1005 FSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYI 1064
Query: 510 RTEPFDPKMWMIPGDNS------------------GSYELNDHSLFNERKIYVTGRKKVK 551
R FDP+ W+ PG S G Y ++D F K G + +
Sbjct: 1065 RDAAFDPRRWVAPGQISLRPFPCNCGIETAFVPFNGGY-ISDDPSFVVGKPCDRGHRWMC 1123
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLV----- 605
SKTV+D VEAL+GA+ GG + + GI V + + + ++ A R+
Sbjct: 1124 SKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKYNSNASRMCYLSKI 1183
Query: 606 -NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++ LE+ L Y+F LL+EA++H S + CYQRLEFLGD+VLD LIT +LY
Sbjct: 1184 KDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDSVLDLLITQHLYAT 1243
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS-FERLSLE 723
+ + PG+LTD+RSASV+N+ +A + V++ +H H+ H S L + + V S E E
Sbjct: 1244 HTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVTEYVRSNLEYHGKE 1303
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
+ F ++ PK LGDI+ES++GAIF+D + ++V++ + PLL PMITP+ + L P R
Sbjct: 1304 NQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPLLSPMITPDKLALPPYR 1363
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E C H ++ + + ++V D + +TAK A+ +L
Sbjct: 1364 ELLELC-SHLGCFIESKCTSEGEELIIEMKVQLRDEQLIAQGHDRNGKTAKANAAARILV 1422
Query: 844 SLKA 847
+K
Sbjct: 1423 DMKV 1426
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS++QSRGRAR +S Y+LM++R
Sbjct: 438 FDLPRTVCSYVQSRGRARKSSSSYVLMIER 467
>gi|168027292|ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162682596|gb|EDQ69013.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1460
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 276/873 (31%), Positives = 418/873 (47%), Gaps = 126/873 (14%)
Query: 36 TPKFD-INKEMGI---CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGALT 89
TPK + +++++G+ C + LP PI V+ Q + KQ LEAC +LH+ GAL
Sbjct: 565 TPKAEYLSQKVGLLYKCDIKLPFGSPIYEVLGEPQRTSRLAKQATALEACTQLHKAGALD 624
Query: 90 DNLLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYL-----IELKQ 144
DNLLP + E + +P ++ + ++ + T H + +
Sbjct: 625 DNLLPSLDFELAADVEKIMQPKNSSGFGTTAQKELHSVAEAEAFTGHWHTSSSGAVLFAY 684
Query: 145 NFNYDI-PAHD-----IVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQLTPDK 197
++DI P D VL + L+ ++ K+ +L + RGR L LG+ LT D+
Sbjct: 685 YMSFDIHPVEDEMHANFVLLIGAALDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLTADQ 744
Query: 198 VLLCRRFQIALFRVIMDHNLDKLNEILK---------------GLWLRDNLEIDYLLLPA 242
+ + FQ LF + + + E K GLW +N YLLLPA
Sbjct: 745 LSNAKLFQTILFNGMFSKMIQPVQENRKRKRESAISSFLTERMGLWKSNNA---YLLLPA 801
Query: 243 SEQS---------IDWEPVASLSFPCD----------------IGLKHHKNCSTMSNARV 277
+ IDW+ + + S + K NC T +
Sbjct: 802 VLEGSNDVGTLAPIDWKIIQATSSVVKNLRFKFLEILTRPFSFVRRKPPVNCLTFAGNHQ 861
Query: 278 VQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI-TYKKHYEER 336
V T + + V T H+G IY + VL A+S F TY + ++ +
Sbjct: 862 VATSE-------LVDVAVLTGHTGIIYPVLRVLHDTTAHSQFPGEKNREFKTYAEFFKIK 914
Query: 337 YGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREP-------SKISFELPPELCRIIMG 389
+G L + LL ++ N L + + P S E+PPELC ++
Sbjct: 915 HGRMLEHPNQPLLQLKQNHRPHNLLPADAGKIEGTPLVSKATMQSTSVEMPPELCVVL-- 972
Query: 390 PMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEG 449
S + S ++PS+MHR++S++LA L+ + IP +VL+A+TT +C E
Sbjct: 973 KFSAAIVRSAYWLPSVMHRIKSVVLASQLR-----RSIDAPKIPVMEVLKALTTTRCNEN 1027
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F++E+LE GDSFLKYA S++LF +EG+LS ++ R I N AL KL D L +I
Sbjct: 1028 FNMEALELFGDSFLKYAVSRKLFLESSTANEGVLSTRRIRSICNEALHKLAVDRGLSAYI 1087
Query: 510 RTEPFDPKMWMIPG-------------DN------------SGSY--ELNDHSLFNER-- 540
R FDP W PG DN +G + EL + E
Sbjct: 1088 RDCQFDPSRWAAPGMLAAKRVNCHCKEDNLLKPFKSTTSKVTGVFGNELLKDKIQTETIK 1147
Query: 541 -KIYVT---GRKKVKSKTVADVVEALIGAFLSTGGENVG-LIFLDRIGIKVDFVNVPYER 595
+I +T G + + SKT++DV EALIGA+L G G L F+ GI V F + E
Sbjct: 1148 PRIGLTCDKGHRYLCSKTISDVTEALIGAYLEYGRNCEGALKFMTWAGIDVHFDSKLMEA 1207
Query: 596 QFQVQAERLV-----NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
+ L +++ E + Y+F++ L +EALTH S M+ + RCYQRLEFLGD
Sbjct: 1208 ASKASPVDLSYDYGEDLKAFEKRIGYTFKNKYLPLEALTHFSNMVGDQIRCYQRLEFLGD 1267
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVLD+L+T +L+ +PT +PG LT +R+ASVNN+ +A +VKH LH ++ H S L I
Sbjct: 1268 AVLDFLLTRHLFTSHPTSTPGLLTSLRTASVNNERFARVAVKHRLHCYLRHGSGRLLHQI 1327
Query: 711 NITVDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
V SFE + S+FG + PK LGD++ES++GAI VD+ + + V+ + PL
Sbjct: 1328 EEFVKSFEAADDDQKNSSFGLNGLEA-PKVLGDLVESIAGAILVDTCFDLDKVWAVMMPL 1386
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTV 800
LEP++TP T+ + P EL E C +S+K V
Sbjct: 1387 LEPIVTPATLDIHPVTELEELCMSKGYSIKYGV 1419
>gi|414871004|tpg|DAA49561.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1199
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 277/903 (30%), Positives = 434/903 (48%), Gaps = 103/903 (11%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RY+ P P F++ + G CTL +P+N ++++ + KQ CLEACKKLH++G
Sbjct: 221 RYYLPKPCFEVGLKDGSYQCTLTMPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELG 280
Query: 87 ALTDNLLP------DVVVEEHDAQ---KHGNEPYDAEHPIYFPPELV-NQCPQDTKITYH 136
L D+L+P D+ + D + G H L N + + +
Sbjct: 281 ELDDHLVPLTEEPMDIDTDTTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESETVILN 340
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTP 195
Y + + + ++ A VL + + L+ ++ + DL + ++ + GKIQL
Sbjct: 341 AYTFDFRCDQEGELYA-GFVLLMESVLDDDVARSEIDLFLIPNKMVYTTMTPCGKIQLNK 399
Query: 196 DKVLLCRRFQIALF-----RVIMDHNLDKLNE---ILKG---LWLRDNLEIDYLLLPASE 244
+++ + FQ F R+ D+L KG W DN+ YLLLP
Sbjct: 400 EQLCKGKLFQEFFFNGIFGRLFHGSRTDELQREFIFTKGHEIQWGSDNM---YLLLPLRN 456
Query: 245 QS-------IDWEPVASLS---------FPCDIGLKHHKNCSTMSNAR---VVQTKSGPL 285
S I WE V S S + D L H CS + + ++ + L
Sbjct: 457 SSQIQHDPNIYWEAVESCSGTVEQLRNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSL 516
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAIT----YKKHYEERYGIQL 341
+ +SVV + H+G+IY + ++ A+ F G + + +Y ++YGI +
Sbjct: 517 HFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSFDEMYNGKASPFASFVDYYHQKYGIVI 576
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCRQEKQR-------EPSKISFELPPELCRIIMGPMSL 393
+ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 577 QHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVAT 634
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IPTSKVLEAITTKKCQEG 449
SF +PS+MHR+QSL+LA L++ N++ IP+S +LEAITT +C E
Sbjct: 635 DILKSFYLLPSVMHRVQSLMLASQLRS--------NISYIQRIPSSLILEAITTLRCCES 686
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F LE LE LGDS LKY LF Y HEG LS + + + NA L K G L G+I
Sbjct: 687 FSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYI 746
Query: 510 RTEPFDPKMWMIPGDNS------------------GSYELNDHSLFNERKIYVTGRKKVK 551
R FDP+ W+ PG S G Y ++D F K G + +
Sbjct: 747 RDAAFDPRRWVAPGQISLRPFPCNCGIETAFVPFNGGY-ISDDPSFVVGKPCDRGHRWMC 805
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLV----- 605
SKTV+D VEAL+GA+ GG + + GI V + + + ++ A R+
Sbjct: 806 SKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKYNSNASRMCYLSKI 865
Query: 606 -NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++ LE+ L Y+F LL+EA++H S + CYQRLEFLGD+VLD LIT +LY
Sbjct: 866 KDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDSVLDLLITQHLYAT 925
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS-FERLSLE 723
+ + PG+LTD+RSASV+N+ +A + V++ +H H+ H S L + + V S E E
Sbjct: 926 HTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVTEYVRSNLEYHGKE 985
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
+ F ++ PK LGDI+ES++GAIF+D + ++V++ + PLL PMITP+ + L P R
Sbjct: 986 NQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPLLSPMITPDKLALPPYR 1045
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E C H ++ + + ++V D + +TAK A+ +L
Sbjct: 1046 ELLELC-SHLGCFIESKCTSEGEELIIEMKVQLRDEQLIAQGHDRNGKTAKANAAARILV 1104
Query: 844 SLK 846
+K
Sbjct: 1105 DMK 1107
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS++QSRGRAR +S Y+LM++R
Sbjct: 120 FDLPRTVCSYVQSRGRARKSSSSYVLMIER 149
>gi|414871006|tpg|DAA49563.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1517
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 277/903 (30%), Positives = 434/903 (48%), Gaps = 103/903 (11%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RY+ P P F++ + G CTL +P+N ++++ + KQ CLEACKKLH++G
Sbjct: 539 RYYLPKPCFEVGLKDGSYQCTLTMPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELG 598
Query: 87 ALTDNLLP------DVVVEEHDAQ---KHGNEPYDAEHPIYFPPELV-NQCPQDTKITYH 136
L D+L+P D+ + D + G H L N + + +
Sbjct: 599 ELDDHLVPLTEEPMDIDTDTTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESETVILN 658
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTP 195
Y + + + ++ A VL + + L+ ++ + DL + ++ + GKIQL
Sbjct: 659 AYTFDFRCDQEGELYA-GFVLLMESVLDDDVARSEIDLFLIPNKMVYTTMTPCGKIQLNK 717
Query: 196 DKVLLCRRFQIALF-----RVIMDHNLDKLNE---ILKG---LWLRDNLEIDYLLLPASE 244
+++ + FQ F R+ D+L KG W DN+ YLLLP
Sbjct: 718 EQLCKGKLFQEFFFNGIFGRLFHGSRTDELQREFIFTKGHEIQWGSDNM---YLLLPLRN 774
Query: 245 QS-------IDWEPVASLS---------FPCDIGLKHHKNCSTMSNAR---VVQTKSGPL 285
S I WE V S S + D L H CS + + ++ + L
Sbjct: 775 SSQIQHDPNIYWEAVESCSGTVEQLRNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSL 834
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAIT----YKKHYEERYGIQL 341
+ +SVV + H+G+IY + ++ A+ F G + + +Y ++YGI +
Sbjct: 835 HFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSFDEMYNGKASPFASFVDYYHQKYGIVI 894
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCRQEKQR-------EPSKISFELPPELCRIIMGPMSL 393
+ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 895 QHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVAT 952
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IPTSKVLEAITTKKCQEG 449
SF +PS+MHR+QSL+LA L++ N++ IP+S +LEAITT +C E
Sbjct: 953 DILKSFYLLPSVMHRVQSLMLASQLRS--------NISYIQRIPSSLILEAITTLRCCES 1004
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F LE LE LGDS LKY LF Y HEG LS + + + NA L K G L G+I
Sbjct: 1005 FSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYI 1064
Query: 510 RTEPFDPKMWMIPGDNS------------------GSYELNDHSLFNERKIYVTGRKKVK 551
R FDP+ W+ PG S G Y ++D F K G + +
Sbjct: 1065 RDAAFDPRRWVAPGQISLRPFPCNCGIETAFVPFNGGY-ISDDPSFVVGKPCDRGHRWMC 1123
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLV----- 605
SKTV+D VEAL+GA+ GG + + GI V + + + ++ A R+
Sbjct: 1124 SKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKYNSNASRMCYLSKI 1183
Query: 606 -NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++ LE+ L Y+F LL+EA++H S + CYQRLEFLGD+VLD LIT +LY
Sbjct: 1184 KDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDSVLDLLITQHLYAT 1243
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS-FERLSLE 723
+ + PG+LTD+RSASV+N+ +A + V++ +H H+ H S L + + V S E E
Sbjct: 1244 HTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVTEYVRSNLEYHGKE 1303
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
+ F ++ PK LGDI+ES++GAIF+D + ++V++ + PLL PMITP+ + L P R
Sbjct: 1304 NQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPLLSPMITPDKLALPPYR 1363
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E C H ++ + + ++V D + +TAK A+ +L
Sbjct: 1364 ELLELC-SHLGCFIESKCTSEGEELIIEMKVQLRDEQLIAQGHDRNGKTAKANAAARILV 1422
Query: 844 SLK 846
+K
Sbjct: 1423 DMK 1425
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS++QSRGRAR +S Y+LM++R
Sbjct: 438 FDLPRTVCSYVQSRGRARKSSSSYVLMIER 467
>gi|157285013|gb|ABV31246.1| dicer-like 4 [Physcomitrella patens]
Length = 1445
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 267/860 (31%), Positives = 418/860 (48%), Gaps = 75/860 (8%)
Query: 32 YFKPTPKFDINKE-MGI-CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGA 87
++ PTP+F +++ G+ CT+ LP + +Q+V + + K+ ACL AC++L+ GA
Sbjct: 590 FYTPTPQFSYSEDGSGVKCTIKLPTDALVQSVEGRPVSSQADAKRVACLIACERLYDAGA 649
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQD-TKITYHC 137
LT+ LL D + E ++ G +P + I P + H
Sbjct: 650 LTELLLLKSKENAYSLDAIAPESNSTT-GRDPLPS-RSIIVPDAFSGTWGSGLNSVELHA 707
Query: 138 YLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLK--HLGKIQLTP 195
Y I N D + L + ++ E + +L++ RL VN K G I P
Sbjct: 708 YAISFVATPN-DRAYVNFGLFLEADMGPEAGSIEVELQLSNRRL-VNAKCSPCGTILFEP 765
Query: 196 DKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ------SIDW 249
D+ + + A+F ++D N L G W + L YLLLP E+ SIDW
Sbjct: 766 DQSTNAKSSR-AIFSSVLDQKPPVPNIELSGEWNSNRL---YLLLPLKEKQDALPLSIDW 821
Query: 250 EPVASLSFPCDIGLKHHKNC-STMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQ--IYYI 306
+ + L G + S + + +++ G + NS++ T H+G+ +Y
Sbjct: 822 DCIEDLISDVMKGYNTLEEVPSEIPRSSLLRLIDGYFPVEHVTNSLIQTEHTGKRCLYCA 881
Query: 307 TGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKC-- 364
++ +N S +Y +Y +++ L F ++ +L + + N L++
Sbjct: 882 RELIPDMNGQSPMIMKVSKYNSYSDYYLKKHNRTLNFVEQPMLKAKPLIQVNNLLTQRTT 941
Query: 365 --RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 422
R + + ++ ELP ELC+I++ +S + + +PS MHRL+ LLLAV + L
Sbjct: 942 SERPAAEEQKTESLVELPLELCKIMVKGLSCALTNGISLLPSFMHRLEGLLLAVQFRKSL 1001
Query: 423 LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
+ +P + +LEAITT KCQE F LE LE LGD+FL+ + S++LF + EG
Sbjct: 1002 PSP--HSSPVPANLMLEAITTSKCQESFSLEGLELLGDAFLEVSVSERLFLLHNRLDEGE 1059
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI 542
LS ++ +I N L +LG + + +IR F PK W PG ++
Sbjct: 1060 LSKRRTNLICNKMLERLGRERGIMNYIRDTQFSPKEWATPG-----------------RV 1102
Query: 543 YVTGRK--KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYER----- 595
T K ++ KT+ADV EALIGA GG + +G +V + E
Sbjct: 1103 RETQCKLPPLQGKTIADVFEALIGAHYIHGGVEAAQAMMGWLGCEVGVSSSIREEARTRV 1162
Query: 596 --QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
Q ++ +E V LE LLNY F++ LLVEALTH S CYQRL FLGDAVL
Sbjct: 1163 HGQLELLSE--AKVSELEILLNYKFQNKGLLVEALTHASCR-RHSGDCYQRLGFLGDAVL 1219
Query: 654 DYLITVYLYNKYPTL--SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY---- 707
D+LIT + Y L PG LTD+RSA+VNN+C+A +V+H LH ++LH S +L
Sbjct: 1220 DFLITKHFYANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVD 1279
Query: 708 KWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
K+++ + LS S + L D++ESL+GA+F+DSG + V+ + L
Sbjct: 1280 KYVHGSTTDVCALSEAFLLSKHLSCSSMQVLSDLVESLAGAVFLDSGYKLDTVWNVFKQL 1339
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPR-INGKAAVTVEVHANGTLFKHTHA 826
L+P++TP T+RL+P REL E CQ F R G +TV V
Sbjct: 1340 LKPLVTPATLRLEPIRELWELCQTEKFGEPNYKKKREAMGDFDMTVTVELKDETITGVGR 1399
Query: 827 DADKETAKKVASKEVLKSLK 846
D+++A+KVA+ + L++LK
Sbjct: 1400 KPDEKSARKVAAIQALETLK 1419
>gi|251764789|sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
Full=Dicer-like protein 3b; Short=OsDCL3b
Length = 1637
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 267/840 (31%), Positives = 397/840 (47%), Gaps = 92/840 (10%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RYF P P F++ E G+ CTL LP N Q+++ + KQ LEACKKLHQ+G
Sbjct: 596 RYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLG 655
Query: 87 ALTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTK-ITYH 136
L D+L+P +E G H L D++ IT +
Sbjct: 656 ELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLN 715
Query: 137 CYLIEL---KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQ 192
Y I+ ++ NY VL + EL+ ++ DL + ++ + GK+Q
Sbjct: 716 TYRIDFLCDQEGENY----AGFVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQ 771
Query: 193 LTPDKVLLCRRFQIALFRVIMD---HNLDKLNE-----ILKGLWLRDNLEIDYLLLPASE 244
L ++ + FQ F I H K KG ++ N E YLLLP +
Sbjct: 772 LNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRD 831
Query: 245 QS-------IDWEPVASLSFPCDIGLKHHK--------NC----STMSNARVVQTKSGPL 285
S I WE + S + + ++ NC ++ + L
Sbjct: 832 SSYIQDDLSIHWEAIESCAGAVEQLWSSYQGDENVIPVNCIPQKRRGGQEEIIHLANKSL 891
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA----ITYKKHYEERYGIQL 341
I +SVV + H+G+IY + ++ A F G ++ +Y ++YGI +
Sbjct: 892 HCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIII 951
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCR-------QEKQREPSKISFELPPELCRIIMGPMSL 393
++ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 952 QHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQIHARVPPEL--LIHLDVTT 1009
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
SF +PS++HRLQSL+LA L+ + N IP + +LEAITT +C E F LE
Sbjct: 1010 DILKSFYLLPSVIHRLQSLMLASQLRREI----GYNQHIPVTLILEAITTLRCCETFSLE 1065
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGDS LKY LF Y HEG LS + + + NA L K G L G++R
Sbjct: 1066 RLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNA 1125
Query: 514 FDPKMWMIPGD--------NSG----------SYELNDHSLFNERKIYVTGRKKVKSKTV 555
FDP+ W+ PG N G Y +D S F + G + + SKT+
Sbjct: 1126 FDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFFVGKPCD-RGHRWMCSKTI 1184
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPYERQFQVQAERLVNVRHL 610
+D VEAL+GA+ GG L + GI + V + ++ ++ L
Sbjct: 1185 SDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEEL 1244
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E+ L Y+F LL+EA+TH S + CYQRLEFLGD+VLD L+T +LY + + P
Sbjct: 1245 EAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDP 1304
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS-FERLSLESTFGWE 729
G+LTD+RSA V+N+ +A + V++ +H H+ H S L + I V S E ES F
Sbjct: 1305 GELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYVRSNLECQGKESEFLQH 1364
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
+ PK LGDI+ES++GA+F+D+ N ++V+E PLL P+ITP+ + L P REL E C
Sbjct: 1365 TTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELC 1424
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS++QSRGRAR NS+++LM++R
Sbjct: 495 FDLPRTVCSYVQSRGRARRNNSEFILMIER 524
>gi|222613035|gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
Length = 1570
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 267/840 (31%), Positives = 397/840 (47%), Gaps = 92/840 (10%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RYF P P F++ E G+ CTL LP N Q+++ + KQ LEACKKLHQ+G
Sbjct: 528 RYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLG 587
Query: 87 ALTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTK-ITYH 136
L D+L+P +E G H L D++ IT +
Sbjct: 588 ELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLN 647
Query: 137 CYLIEL---KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQ 192
Y I+ ++ NY VL + EL+ ++ DL + ++ + GK+Q
Sbjct: 648 TYRIDFLCDQEGENY----AGFVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQ 703
Query: 193 LTPDKVLLCRRFQIALFRVIMD---HNLDKLNE-----ILKGLWLRDNLEIDYLLLPASE 244
L ++ + FQ F I H K KG ++ N E YLLLP +
Sbjct: 704 LNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRD 763
Query: 245 QS-------IDWEPVASLSFPCDIGLKHHK--------NC----STMSNARVVQTKSGPL 285
S I WE + S + + ++ NC ++ + L
Sbjct: 764 SSYIQDDLSIHWEAIESCAGAVEQLWSSYQGDENVIPVNCIPQKRRGGQEEIIHLANKSL 823
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA----ITYKKHYEERYGIQL 341
I +SVV + H+G+IY + ++ A F G ++ +Y ++YGI +
Sbjct: 824 HCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIII 883
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCR-------QEKQREPSKISFELPPELCRIIMGPMSL 393
++ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 884 QHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQIHARVPPEL--LIHLDVTT 941
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
SF +PS++HRLQSL+LA L+ + N IP + +LEAITT +C E F LE
Sbjct: 942 DILKSFYLLPSVIHRLQSLMLASQLRREI----GYNQHIPVTLILEAITTLRCCETFSLE 997
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGDS LKY LF Y HEG LS + + + NA L K G L G++R
Sbjct: 998 RLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNA 1057
Query: 514 FDPKMWMIPGD--------NSG----------SYELNDHSLFNERKIYVTGRKKVKSKTV 555
FDP+ W+ PG N G Y +D S F + G + + SKT+
Sbjct: 1058 FDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFFVGKPCD-RGHRWMCSKTI 1116
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPYERQFQVQAERLVNVRHL 610
+D VEAL+GA+ GG L + GI + V + ++ ++ L
Sbjct: 1117 SDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEEL 1176
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E+ L Y+F LL+EA+TH S + CYQRLEFLGD+VLD L+T +LY + + P
Sbjct: 1177 EAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDP 1236
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS-FERLSLESTFGWE 729
G+LTD+RSA V+N+ +A + V++ +H H+ H S L + I V S E ES F
Sbjct: 1237 GELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYVRSNLECQGKESEFLQH 1296
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
+ PK LGDI+ES++GA+F+D+ N ++V+E PLL P+ITP+ + L P REL E C
Sbjct: 1297 TTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELC 1356
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS++QSRGRAR NS+++LM++R
Sbjct: 427 FDLPRTVCSYVQSRGRARRNNSEFILMIER 456
>gi|78099743|gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
Length = 1116
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 266/839 (31%), Positives = 395/839 (47%), Gaps = 90/839 (10%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RYF P P F++ E G+ CTL LP N Q+++ + KQ LEACKKLHQ+G
Sbjct: 76 RYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLG 135
Query: 87 ALTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTK-ITYH 136
L D+L+P +E G H L D++ IT +
Sbjct: 136 ELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLN 195
Query: 137 CYLIEL---KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQ 192
Y I+ ++ NY VL + EL+ ++ DL + ++ + GK+Q
Sbjct: 196 TYRIDFLCDQEGENY----AGFVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQ 251
Query: 193 LTPDKVLLCRRFQIALFRVIMD---HNLDKLNE-----ILKGLWLRDNLEIDYLLLPASE 244
L ++ + FQ F I H K KG ++ N E YLLLP +
Sbjct: 252 LNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRD 311
Query: 245 QS-------IDWEPVASLSFPCDIGLKHHK--------NC----STMSNARVVQTKSGPL 285
S I WE + S + + ++ NC + ++ + L
Sbjct: 312 SSYIQDDLSIHWEAIESCAGAVEQLWSSYQGDENVIPVNCIPQKRSGGQEEIIHLANKSL 371
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA----ITYKKHYEERYGIQL 341
I +SVV + H+G+IY + ++ A F G ++ +Y ++YGI +
Sbjct: 372 HCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIII 431
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCR-------QEKQREPSKISFELPPELCRIIMGPMSL 393
++ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 432 QHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQIHARVPPEL--LIHLDVTT 489
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
SF +PS++HRLQSL+LA L+ + N IP + +LEAITT +C E F LE
Sbjct: 490 DILKSFYLLPSVIHRLQSLMLASQLRREI----GYNQHIPVTLILEAITTLRCCETFSLE 545
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGDS LKY LF Y HEG LS + + + NA L K G L G++R
Sbjct: 546 RLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNA 605
Query: 514 FDPKMWMIPGD--------NSG---------SYELNDHSLFNERKIYVTGRKKVKSKTVA 556
FDP+ W+ PG N G + D F K G + + SKT++
Sbjct: 606 FDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFVVGKPCDRGHRWMCSKTIS 665
Query: 557 DVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPYERQFQVQAERLVNVRHLE 611
D VEAL+GA+ GG L + GI + V + ++ ++ LE
Sbjct: 666 DCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEELE 725
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ L Y+F LL+EA+TH S + CYQRLEFLGD+VLD L+T +LY + + PG
Sbjct: 726 AKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPG 785
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS-FERLSLESTFGWES 730
+LTD+RSA V+N+ +A + V++ +H H+ H S L I V S E ES F +
Sbjct: 786 ELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLGQITEYVRSNLECQGKESEFLQHT 845
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
PK LGDI+ES++GA+F+D+ N ++V+E PLL P+ITP+ + L P REL E C
Sbjct: 846 TCKVPKVLGDIMESIAGAVFLDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELC 904
>gi|449489290|ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Cucumis sativus]
Length = 1639
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 271/900 (30%), Positives = 418/900 (46%), Gaps = 120/900 (13%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK--------RYFKPTPKFDINKEMGI--CTLY 51
F T C +++ G + +S L+ + +YF P P F ++ G C L
Sbjct: 557 FSLMETDCYIVEATGASVTADSSVGLVYQYCKKLPGDKYFSPKPIFQLSYGEGSYECQLT 616
Query: 52 LPNNCPIQTVIAQG--NIKTLKQTACLEACKKLHQIGALTDNLLPDVV-VEEHD------ 102
LP +QT++ N KQ CLEACKKLHQ+GAL D+LLP V + E D
Sbjct: 617 LPPTAALQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLPSVEEISESDMGLKSN 676
Query: 103 --AQKHGNEPYDAEHPIYFPPELVNQCPQDTK-ITYHCYLIELKQNFNYDIPAHDIVLAV 159
+ G+ H L + + T+ Y + + Y++ + VL +
Sbjct: 677 ASTSRAGSTKRKELHGRTAIRALSGTWEEQVEGTTFQAYKFDFSCSVIYEVYS-GFVLLI 735
Query: 160 RTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR------VIM 213
++L+ ++ +L + + ++ G++ L +++ + FQ F I
Sbjct: 736 ESKLDDDVSNFELELYLLSKMVKASVSFGGEVHLDAEQITKAKCFQELFFNGLFGRLFIG 795
Query: 214 DHNLDKLNEIL-----KGLWLRDNLEIDYLLLPASE--------QSIDWEPVASLSFPCD 260
K + L LW+ N+ YLLLP I W + S +
Sbjct: 796 SKTTGKKRDFLLQKDTNPLWISSNM---YLLLPVDLPDDSTHDLWKIHWRAIDSCVSVVE 852
Query: 261 I-----GLKHHKN-----CSTMSNARVVQTKSGPLCTCMIY------------NSVVCTP 298
L +N S S +R T++G +I+ + VV
Sbjct: 853 FLKKNSSLDAERNYGAGAISDSSPSRNNSTETGSNAASVIHFANCVLDVHSLKDRVVLAI 912
Query: 299 HSGQIYYITGVLGHLNANSLFTRN-DGGA---ITYKKHYEERYGIQLCFDQELLLNGRRI 354
H+G+IY I V+ + +A S F N D G IT+ ++ +RYGI L F ++ LL ++
Sbjct: 913 HTGRIYSIVEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQS 972
Query: 355 FHAQNYLSKCRQEK-QREPSKISFE-------LPPELCRIIMGPMSLSTFYSFTFVPSIM 406
+ N L + E + PS +F+ +PPEL + P + S +PS++
Sbjct: 973 HNPHNLLVNFKDEGFDKLPSGPAFKRPQMHVHMPPELVLSMDVPKGV--LKSSYLLPSLI 1030
Query: 407 HRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYA 466
HR +SL+LA L+ + H ++ I +S +LEA+TT E F LE LE LGDS LKYA
Sbjct: 1031 HRFESLMLASQLRKEINYHS-NSLGISSSLILEALTTLGSCENFSLERLELLGDSVLKYA 1089
Query: 467 ASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGD-- 524
S LF + HEG LS ++ ++I NA L LG L G+IR FDP+ W+ PG
Sbjct: 1090 VSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSAFDPRRWVAPGQCT 1149
Query: 525 ----------NSGSYELNDHSLFNERKIYV-----TGRKKVKSKTVADVVEALIGAFLST 569
++ L+D + K+ + G + V SKT+AD EALIGA+
Sbjct: 1150 NRPVPCKCGVDTVEVPLHDKFCTEDPKVVLGKCCDKGHRWVVSKTIADCAEALIGAYYVD 1209
Query: 570 GGENVGLIFLDRIGIKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLL 624
GG L + +GI V+ V+ + + LES + Y F LL
Sbjct: 1210 GGIIAALHVMKWLGIDVNLDVALVVDAITSASLRSCPLGDTEIATLESKIGYDFAVKGLL 1269
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
+EA+TH S + CYQRLEFLGD+VLD LIT + Y Y + PG+LTD+RSASVNN+
Sbjct: 1270 LEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDPGELTDLRSASVNNE 1329
Query: 685 CYALSSVKHGLHKHILHAS-------QELYKWINITVDSFERLSLESTFGWESETSFPKA 737
+A +V+ L +H+ H S E K+++ + D+ + L PK
Sbjct: 1330 NFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLSESQDTGKPL---------HGNKGPKV 1380
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++ES++GAI +D+ N + V++ +PLL P +TP+ + L P REL E C + +K
Sbjct: 1381 LGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELIELCDSLGYFIK 1440
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV S++QSRGRAR NS Y+L+L+R
Sbjct: 492 FDLPKTVRSYVQSRGRARQNNSQYILLLER 521
>gi|315258243|gb|ADT91700.1| dicer-like protein 2 [Nicotiana attenuata]
Length = 239
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 160/236 (67%), Positives = 191/236 (80%)
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
VKK++IISNAALCKLGC K+PGFIR+EPFD K W+IPGDNS ++ L K+Y
Sbjct: 1 VKKNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPGDNSQVQNFDEELLMPSVKMYS 60
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL 604
GR+K+KSK VADVVEALIGAFLS+GGE L F+ +G+ +DFV+ P R F + AE+L
Sbjct: 61 RGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGVDIDFVDAPTPRHFPMNAEKL 120
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
VNVR+LESLL+Y F DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY +T +LY K
Sbjct: 121 VNVRYLESLLDYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYAVTAHLYFK 180
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
YP LSPG +TD+RSASVNN+CYA ++VK GLHKHILHASQ+L + I TV +FE+L
Sbjct: 181 YPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILHASQDLQRQIVNTVLNFEKL 236
>gi|449478272|ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
[Cucumis sativus]
Length = 1987
Score = 332 bits (850), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 219/606 (36%), Positives = 327/606 (53%), Gaps = 64/606 (10%)
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFD 344
+ +V HSG+ +Y+ + A + F R +G G + +Y +Y+++YG++L +
Sbjct: 1294 LVGRIVTAAHSGKRFYVDSIRYDTTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYK 1353
Query: 345 QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE------LPPELCRIIMGPMSLSTFYS 398
+ L+ GR + + +N LS R E S+ + + LPPELC ++ P+ S
Sbjct: 1354 HQPLIRGRGVSYCKNLLSP-RFEHAENESEETLDKTYYVYLPPELC--LVHPLPGSLVRG 1410
Query: 399 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETL 458
+PSIM R++S+LLA+ LK+M+ N +P SK+LEA+T CQE F E E L
Sbjct: 1411 AQRLPSIMRRVESMLLAIQLKHMI------NYPVPASKILEALTAASCQETFCYERAELL 1464
Query: 459 GDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM 518
GD++LK+ S+ LF Y HEG L+ + +++SN L + KL +I+ + F P
Sbjct: 1465 GDAYLKWVVSRFLFLKYPRKHEGQLTRMRQQMVSNMVLYQYALSKKLQSYIQADRFAPSR 1524
Query: 519 WMIPG----------------------DNSGSYELNDH-SLFNERKIY-------VTGRK 548
W PG ++ G E++ H +F + ++ + +
Sbjct: 1525 WAAPGVLPVYDEDMKDGESSFFDQDKSNSDGVSEMDLHLDVFEDGEVEDREVESDSSSYR 1584
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAE--R 603
+ SKT+ADVVEALIG + GG+ + IGIKV+F E RQ + R
Sbjct: 1585 VLSSKTLADVVEALIGVYYVEGGKTAANHLMKWIGIKVEFDAGEVECGTRQSNLPESILR 1644
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
V+ LE LN F+D LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+
Sbjct: 1645 SVDFDALEGALNIKFQDRGLLVEAITHASRPSCGVS-CYQRLEFVGDAVLDHLITRHLFF 1703
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K I V + L+
Sbjct: 1704 TYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHIHLRHGSSALEKQIRDFVKEVQDELLK 1763
Query: 724 ---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ 780
++FG + PK LGDI+ES++GAIF+DSG + VV+ +PLL PM+TPET+ +
Sbjct: 1764 PGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMH 1822
Query: 781 PARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKE 840
P REL E CQ+ ++ A RI A TVEV +G + K+ A+K+A++
Sbjct: 1823 PVRELQERCQQQAEGLEYK-ATRIGNLA--TVEVFIDGVQIGIAQ-NPQKKMAQKLAARN 1878
Query: 841 VLKSLK 846
L LK
Sbjct: 1879 ALAVLK 1884
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP N P + + +++ +Q CL ACKKLH++GA TD LLPD E +
Sbjct: 962 CKLQLPCNAPFEDLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEKEKV 1021
Query: 106 HGNE-----PYDAEHPIYFPPELVN-----------QCPQDTKI------TYHCYLIELK 143
N+ P A H ++P + N D+K T C +
Sbjct: 1022 EQNDDGDPLPGTARHREFYPEGVANILQGEWILTGRDTFSDSKFLHLYMYTVQCVNVGSS 1081
Query: 144 QNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCR 202
++ + + + +EL++E+ ++ DL + R T +L G +T ++ +
Sbjct: 1082 KDL-FLTQVSNFAVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITESQLASLK 1140
Query: 203 RFQIALFRVIMDHNLD 218
F + L +++D +++
Sbjct: 1141 SFHVRLMSIVLDVDVE 1156
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 831 FDLAKTVLAYIQSRGRARKPGSDYILMVER 860
>gi|449432976|ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
Length = 1986
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 219/602 (36%), Positives = 326/602 (54%), Gaps = 64/602 (10%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
+V HSG+ +Y+ + A + F R +G G + +Y +Y+++YG++L + + L
Sbjct: 1297 IVTAAHSGKRFYVDSIRYDTTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYKHQPL 1356
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKISFE------LPPELCRIIMGPMSLSTFYSFTFV 402
+ GR + + +N LS R E S+ + + LPPELC ++ P+ S +
Sbjct: 1357 IRGRGVSYCKNLLSP-RFEHAENESEETLDKTYYVYLPPELC--LVHPLPGSLVRGAQRL 1413
Query: 403 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSF 462
PSIM R++S+LLA+ LK+M+ N +P SK+LEA+T CQE F E E LGD++
Sbjct: 1414 PSIMRRVESMLLAIQLKHMI------NYPVPASKILEALTAASCQETFCYERAELLGDAY 1467
Query: 463 LKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIP 522
LK+ S+ LF Y HEG L+ + +++SN L + KL +I+ + F P W P
Sbjct: 1468 LKWVVSRFLFLKYPRKHEGQLTRMRQQMVSNMVLYQYALSKKLQSYIQADRFAPSRWAAP 1527
Query: 523 G----------------------DNSGSYELNDH-SLFNERKIY-------VTGRKKVKS 552
G ++ G E++ H +F + ++ + + + S
Sbjct: 1528 GVLPVYDEDMKDGESSFFDQDKSNSDGVSEMDLHLDVFEDGEVEDREVESDSSSYRVLSS 1587
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAE--RLVNV 607
KT+ADVVEALIG + GG+ + IGIKV+F E RQ + R V+
Sbjct: 1588 KTLADVVEALIGVYYVEGGKTAANHLMKWIGIKVEFDAGEVECGTRQSNLPESILRSVDF 1647
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
LE LN F+D LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1648 DALEGALNIKFQDRGLLVEAITHASRPSCGVS-CYQRLEFVGDAVLDHLITRHLFFTYTD 1706
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE---S 724
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K I V + L+ +
Sbjct: 1707 LPPGRLTDLRAAAVNNENFARVAVKHNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFN 1766
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
+FG + PK LGDI+ES++GAIF+DSG + VV+ +PLL PM+TPET+ + P RE
Sbjct: 1767 SFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVRE 1825
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L E CQ+ ++ A RI A TVEV +G + K+ A+K+A++ L
Sbjct: 1826 LQERCQQQAEGLEYK-ATRIGNLA--TVEVFIDGVQIGIAQ-NPQKKMAQKLAARNALAV 1881
Query: 845 LK 846
LK
Sbjct: 1882 LK 1883
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP N P + + +++ +Q CL ACKKLH++GA TD LLPD E +
Sbjct: 961 CKLQLPCNAPFEDLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEKEKV 1020
Query: 106 HGNE-----PYDAEHPIYFPPELVN-----------QCPQDTKI------TYHCYLIELK 143
N+ P A H ++P + N D+K T C +
Sbjct: 1021 EQNDDGDPLPGTARHREFYPEGVANILQGEWILTGRDTFSDSKFLHLYMYTVQCVNVGSS 1080
Query: 144 QNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCR 202
++ + + + +EL++E+ ++ DL + R T +L G +T ++ +
Sbjct: 1081 KDL-FLTQVSNFAVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITESQLASLK 1139
Query: 203 RFQIALFRVIMDHNLD 218
F + L +++D +++
Sbjct: 1140 SFHVRLMSIVLDVDVE 1155
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 830 FDLAKTVLAYIQSRGRARKPGSDYILMVER 859
>gi|157285011|gb|ABV31245.1| dicer-like 3 [Physcomitrella patens]
Length = 1641
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 283/945 (29%), Positives = 433/945 (45%), Gaps = 170/945 (17%)
Query: 36 TPKFD-INKEMGI---CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGALT 89
TPK + +++++G+ C + LP PI V+ Q + KQ LEAC +LH+ GAL
Sbjct: 633 TPKAEYLSQKVGLLYKCDIKLPFGSPIYEVLGEPQRTSRLAKQATALEACTQLHKAGALD 692
Query: 90 DNLLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCY-----LIELKQ 144
DNLLP + E + +P ++ + ++ + T H + +
Sbjct: 693 DNLLPSLDFELAADVEKIMQPKNSSGFGTTAQKELHSVAEAEAFTGHWHTSSSGAVLFAY 752
Query: 145 NFNYDI-PAHD-----IVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQLTPDK 197
++DI P D VL + L+ ++ K+ +L + RGR L LG+ LT D+
Sbjct: 753 YMSFDIHPVEDEMHANFVLLIGAALDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLTADQ 812
Query: 198 VLLCRRFQIALFRVIMDHNLDKLNEILK---------------GLWLRDNLEIDYLLLPA 242
+ + FQ LF + + + E K GLW +N YLLLPA
Sbjct: 813 LSNAKLFQTILFNGMFSKMIQPVQENRKRKRESAISSFLTERMGLWKSNNA---YLLLPA 869
Query: 243 SEQS---------IDWE-------PVASLSFPCDIGLKHHKNCSTMSNARVVQ-----TK 281
+ IDW+ V +L P D KH + ++ +
Sbjct: 870 VLEGSNDVGTLAPIDWKIIQATSSVVKNLVLPEDPDFKHSQPRKRFKFLEILTRPFSFVR 929
Query: 282 SGPLCTCMIY------------NSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI-T 328
P C+ + + V T H+G IY + VL A+S F T
Sbjct: 930 RKPPVNCLTFAGNHQVATSELVDVAVLTGHTGIIYPVLRVLHDTTAHSQFPGEKNREFKT 989
Query: 329 YKKHYEERYGIQLCFDQELLLN----------------------GRR------------- 353
Y + ++ ++G L + LL G R
Sbjct: 990 YAEFFKIKHGRMLEHPNQPLLQLKQNHRPHNLLPADAGKIEGPTGARKMKKIQKTEATLV 1049
Query: 354 ----------IFHAQNYLSKCRQEKQREPSK-----ISFELPPELCRIIMGPMSLSTFYS 398
+++ ++ + E ++ SK S E+PPELC ++ S + S
Sbjct: 1050 EARSVEEDFEVYNMKDQANSSLSEVEKVVSKATMQSTSVEMPPELCVVL--KFSAAIVRS 1107
Query: 399 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETL 458
++PS+MHR++S++LA L+ + IP +VL+A+TT +C E F++E+LE
Sbjct: 1108 AYWLPSVMHRIKSVVLASQLR-----RSIDAPKIPVMEVLKALTTTRCNENFNMEALELF 1162
Query: 459 GDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM 518
GDSFLKYA S++LF +EG+LS ++ R I N AL KL D L +IR FDP
Sbjct: 1163 GDSFLKYAVSRKLFLESSTANEGVLSTRRIRSICNEALHKLAVDRGLSAYIRDCQFDPSR 1222
Query: 519 WMIPG-------------DN------------SGSY--ELNDHSLFNER---KIYVT--- 545
W PG DN +G + EL + E +I +T
Sbjct: 1223 WAAPGMLAAKRVNCHCKEDNLLKPFKSTTSKVTGVFGNELLKDKIQTETIKPRIGLTCDK 1282
Query: 546 GRKKVKSKTVADVVEALIGAFLSTGGENVG-LIFLDRIGIKVDFVNVPYERQFQVQAERL 604
G + + SKT++DV EALIGA+L G G L F+ GI V F + E + L
Sbjct: 1283 GHRYLCSKTISDVTEALIGAYLEYGRNCEGALKFMTWAGIDVHFDSKLMEAASKASPVDL 1342
Query: 605 V-----NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 659
+++ E + Y+F++ L +EALTH S M+ + RCYQRLEFLGDAVLD+L+T
Sbjct: 1343 SYDYGEDLKAFEKRIGYTFKNIYLPLEALTHFSNMVGDQIRCYQRLEFLGDAVLDFLLTR 1402
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
+L+ +PT +PG LT +R+ASVNN+ +A +VKH LH ++ H S L I V SFE
Sbjct: 1403 HLFTSHPTSTPGLLTSLRTASVNNERFARVAVKHRLHCYLRHGSGRLLHQIEEFVKSFEA 1462
Query: 720 LSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET 776
+ S+FG + PK LGD++ES++GAI VD+ + + V+ + PLLEP++TP T
Sbjct: 1463 ADDDQKNSSFGLNGLEA-PKVLGDLVESIAGAILVDTCFDLDKVWAVMMPLLEPIVTPAT 1521
Query: 777 MRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLF 821
+ + P EL E C +S+K V + EV + LF
Sbjct: 1522 LDIHPVTELEELCMSKGYSIKYGVHKEDECNSRAIYEVQISDELF 1566
>gi|242039323|ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
gi|241920910|gb|EER94054.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
Length = 1586
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 266/842 (31%), Positives = 403/842 (47%), Gaps = 94/842 (11%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RY+ P P F++ + G C L +P N ++++ KQ CLEACKKLH++G
Sbjct: 532 RYYLPKPCFEVGLKDGSYQCALTMPPNAAFRSIVGPPSSTCNLAKQLVCLEACKKLHELG 591
Query: 87 ALTDNLLP------DVVVEEHDAQ---KHGNEPYDAEHPIYFPPELV-NQCPQDTKITYH 136
L D+L+P D+ + D + G H I L N + + +
Sbjct: 592 ELDDHLVPLTEEPMDIDTDTTDKKCVSGPGTTKRKELHGIINVHGLSGNWIHESETVILN 651
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVN-LKHLGKIQLTP 195
Y + + + + A VL + + L+ ++ DL + ++ + GKIQL
Sbjct: 652 SYTFDFRCDQEGETFA-GFVLLMESVLDDDVAHSEIDLFLIPNKMVYTAITPCGKIQLNK 710
Query: 196 DKVLLCRRFQIALFRVIMDH--------NLDKLNEILKG---LWLRDNLEIDYLLLPASE 244
+++ + FQ F I L + KG W DN+ YLLLP
Sbjct: 711 EQLRKGKLFQEFFFNGIFGRLFHGSRTSGLQREFIFRKGHEIQWGSDNM---YLLLPLRN 767
Query: 245 QS-------IDWEPVASLS---------FPCDIGLKHHKNCSTMSNAR---VVQTKSGPL 285
S I WE V S S + D L H CS + + ++ + L
Sbjct: 768 SSHIQHDLNIYWEAVESCSGAVEQLRNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSL 827
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAIT----YKKHYEERYGIQL 341
+ +SVV + H+G+IY + ++ A+ F G + + +Y ++YGI +
Sbjct: 828 HFSTVKDSVVLSLHTGRIYSVLDLILDTTADDSFDEMYNGKASPFSSFVDYYHQKYGIVI 887
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCRQEKQR-------EPSKISFELPPELCRIIMGPMSL 393
+ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 888 QHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVTT 945
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
SF +PS+MHR+QSL+LA L+ + IP+S +LEAITT +C E F LE
Sbjct: 946 DILKSFYLLPSVMHRVQSLMLASQLRRDI----SYTQRIPSSLILEAITTLRCCETFSLE 1001
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGDS LKY LF Y HEG LS + + + NA L K G L G+IR
Sbjct: 1002 RLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGICRSLQGYIRDTA 1061
Query: 514 FDPKMWMIPGDNS------------------GSYELNDHSLFNERKIYVTGRKKVKSKTV 555
FDP+ W+ PG S G Y ++D F K G + + SKTV
Sbjct: 1062 FDPRRWVAPGQISLRPFPCNCGIETAFVPFTGEY-ISDDPSFIVGKPCDRGHRWMCSKTV 1120
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNV------R 608
+D VEAL+GA+ GG + + GI V + + + ++ A +L +
Sbjct: 1121 SDCVEALVGAYYVGGGITAAIWVMRWFGIDVRCDMELVQKAKYNSNASQLCYLSKLKVFE 1180
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE+ L Y+F LL+EA++H S + CYQRLEFLGD+VLD LIT +LY + +
Sbjct: 1181 ELEAKLKYNFSVKGLLLEAVSHPSLQELGVDYCYQRLEFLGDSVLDLLITQHLYATHTDV 1240
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-DSFERLSLESTFG 727
PG+LTD+RSA V+N+ +A + V++ +H H+ H S L + + V S E E+ F
Sbjct: 1241 DPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQVTEYVRSSLEYHGKENEFV 1300
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
++ PK LGDI+ES++GAIF+D N ++V++ + PLL PMITP+ + L P REL E
Sbjct: 1301 QQATFKAPKVLGDIMESITGAIFIDVNFNVDLVWKIVEPLLSPMITPDKLALPPYRELLE 1360
Query: 788 YC 789
C
Sbjct: 1361 LC 1362
>gi|224068194|ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa]
Length = 1817
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 218/619 (35%), Positives = 326/619 (52%), Gaps = 78/619 (12%)
Query: 287 TCM----IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERY 337
TC+ + +V HSG+ +Y+ + + A F R +G G + +Y +Y+++Y
Sbjct: 1160 TCVNADALMGRIVTAAHSGKRFYVDSICYDMTAEISFPRKEGYLGPLEYSSYADYYKQKY 1219
Query: 338 GIQLCFDQELLLNGRRIFHAQNYLS---------KCRQEKQREPSKISFELPPELCRIIM 388
G++L F Q+ LL GR + + +N LS + E+ + + F LPPELC ++
Sbjct: 1220 GVELKFKQQPLLRGRGVSYCKNLLSPRFEHSDSNEGDAEENLDKTYYVF-LPPELC--LV 1276
Query: 389 GPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQE 448
P+ S +PSIM R++S+LLAV LK+++ N +P SK+LEA+T CQE
Sbjct: 1277 HPLPGSLVRGAQRLPSIMRRVESMLLAVELKDII------NYPVPASKILEALTAASCQE 1330
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
F E E LGD++LK+ S+ LF Y HEG L+ + +++SN L + + L +
Sbjct: 1331 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSY 1390
Query: 509 IRTEPFDPKMWMIPG---------------------------------DNSGSYELNDHS 535
I+ + F P W PG D+ E+ D
Sbjct: 1391 IQADRFAPSRWAAPGVLPVFDEETKDGDSYIFDQEKSLAEDRTGMNHLDDGYENEIEDGE 1450
Query: 536 LFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE- 594
L ++ Y + + SKT+ADVVEALIG + GG+N + IGI+V+F + +
Sbjct: 1451 LESDASSY----RVLSSKTLADVVEALIGVYYVEGGKNAVNHLMKWIGIQVEFDHEEIDG 1506
Query: 595 --RQFQVQAE--RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
R F V R V+ LE L+ F D LL+EA+TH S + CYQRLEF+GD
Sbjct: 1507 ASRPFNVPESVLRSVDFDTLEGALDIKFNDRGLLIEAITHASRPSSGVS-CYQRLEFVGD 1565
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVLD+LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K I
Sbjct: 1566 AVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEKQI 1625
Query: 711 NITVDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
V + L+ ++FG + PK LGDI+ES++GAIF+DSG + VV++ +PL
Sbjct: 1626 RDFVREVQDELLKPVFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPL 1684
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHAD 827
L PM+TPET+ + P REL E CQ+ ++ N TVEV +G +
Sbjct: 1685 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGN---LATVEVFIDGVQVGVAQ-N 1740
Query: 828 ADKETAKKVASKEVLKSLK 846
K+ A+K+A++ L LK
Sbjct: 1741 PQKKMAQKLAARNALVVLK 1759
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 30/193 (15%)
Query: 48 CTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQKHG 107
C L LP N P + + CL ACKKLH++GA TD LLPD EE +
Sbjct: 844 CKLQLPCNAPFEELEGP--------AVCLAACKKLHEMGAFTDMLLPDKGSEEEKDKVDQ 895
Query: 108 NE-----PYDAEHPIYFPPELVNQ-------CPQD---TKITYHCYLIELK------QNF 146
N+ P A H ++P + C +D H YL ++ N
Sbjct: 896 NDEGEPLPGTARHREFYPEGVAKTLQGEWILCGRDGCNNSKVLHLYLYGVRCLNIGTSND 955
Query: 147 NYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCRRFQ 205
+ + + EL++E+ ++ DL + R +T +L G+I +T ++ + F
Sbjct: 956 PFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTMITKASLVFRGRIPITESQLASLKNFH 1015
Query: 206 IALFRVIMDHNLD 218
+ L +++D +++
Sbjct: 1016 VRLMSIVLDVDVE 1028
>gi|379987676|gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
Length = 1690
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 320/605 (52%), Gaps = 70/605 (11%)
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFD 344
I +V HSG+ +Y+ + + A + F R +G G + +Y +Y+++YG+ L +
Sbjct: 994 IVGRIVTAAHSGKRFYVDCIPNDMTAENSFPRKEGYLGPLEYSSYAAYYKQKYGVDLVYK 1053
Query: 345 QELLLNGRRIFHAQNYLS---------KCRQEKQREPSKISFELPPELCRIIMGPMSLST 395
++ LL GR + + +N LS + E+ + + F LPPELC + P+ S
Sbjct: 1054 KQPLLRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVF-LPPELC--FLHPLPGSL 1110
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESL 455
+PSIM R++S+LLAV LK+M+ +P K+LEA+T CQE F E
Sbjct: 1111 VRGAQRLPSIMRRVESMLLAVQLKDMI------GYPVPALKILEALTAASCQETFCYERA 1164
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + + L +I+ + F
Sbjct: 1165 ELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFS 1224
Query: 516 PKMWMIPG-----DNSGSYELNDHSLFNERKI--------------------------YV 544
P W PG D + E + S+F I
Sbjct: 1225 PSRWAAPGVLPVYDEDTNEE--ESSMFGNEIIENGTVAAKTLAADEFEDEEAEEGELDTD 1282
Query: 545 TGRKKV-KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQ 600
+G +V SKT+ADVVEALIG + GG+ F+ IG++VDF E R + +
Sbjct: 1283 SGSYRVLSSKTMADVVEALIGVYYVDGGKYAANHFMKWIGVEVDFDFKETEYSIRPYSIP 1342
Query: 601 AE--RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
R V+ L+ LN SF D LL+EA+TH S + CYQRLEF+GDAVLD+LIT
Sbjct: 1343 ENVLRSVDFDKLQGALNISFNDKGLLLEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1401
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI-NITVDSF 717
+L+ Y L PG LTD+R+A+VNN+ +A +VKHGLH H+ H S L K I + ++
Sbjct: 1402 RHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALEKQIRDFVIEVK 1461
Query: 718 ERLSLE--STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
LS ++FG + PK LGDI ES++GAIF+DSGC+ VV++ +PLL PM+TPE
Sbjct: 1462 NELSKPGFNSFGL-GDCKAPKVLGDIFESIAGAIFLDSGCDTAVVWKVFQPLLHPMVTPE 1520
Query: 776 TMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKK 835
T+ + P REL E CQ+ ++ + N TVEV+ +G ++ A+K
Sbjct: 1521 TLPMHPVRELQERCQQQAQGLEYKASRSGN---IATVEVYVDGIQVGMAQNPQKRKMAQK 1577
Query: 836 VASKE 840
V +E
Sbjct: 1578 VGCQE 1582
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPD----VVVEEH 101
C L LP N P + + +++ +Q CL+ACKKLHQ+GA TD LLPD +E+
Sbjct: 663 CRLQLPCNAPFEKLEGPVCSSMRLAQQAVCLDACKKLHQMGAFTDMLLPDKGSGAELEKV 722
Query: 102 DAQKHGNE-PYDAEHPIYFPPELV------------NQCPQDTKITYHCYLIEL------ 142
+ G+ P + H ++P + + C + + Y I+
Sbjct: 723 EQDDEGDPIPGTSRHREFYPEGVADILKGEWILSGKDSCDSSKLVHLYMYAIKCVNIGTS 782
Query: 143 KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLC 201
K F D+ I+ EL++E+ ++ DL + R T L G I++T K+
Sbjct: 783 KDPFLTDVSEFAILFG--NELDAEVLSMSMDLFIARTVETKATLVFRGPIEVTESKLASL 840
Query: 202 RRFQIALFRVIMDHNLD 218
+ F + + +++D +++
Sbjct: 841 KSFHVRMMSIVLDVDVE 857
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + T+ ++IQSRGRAR SDY+LM++R
Sbjct: 532 FDLAKTILAYIQSRGRARKPGSDYILMVER 561
>gi|356504203|ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1944
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 332/639 (51%), Gaps = 77/639 (12%)
Query: 253 ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCM--IYNSVVCTPHSGQIYYITGVL 310
AS P ++ K+ + +N +++ +CT + +V HSG+ +Y+ +
Sbjct: 1219 ASGLVPNRDAMQTQKHINMTTNGKLMMAD---ICTNAEDLVGRIVTAAHSGKRFYVDSIC 1275
Query: 311 GHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCR 365
++A + F R +G G + +Y +Y+++YG+ L + Q+ L+ GR + + +N LS
Sbjct: 1276 YDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVNLIYKQQPLIRGRGVSYCKNLLSPRF 1335
Query: 366 QEKQREPSKISFE-----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKN 420
+ + E +I + LPPELC ++ P+ S +PSIM R++S+LLAV LKN
Sbjct: 1336 EHSEGESEEIHDKTYYVFLPPELC--LVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKN 1393
Query: 421 MLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHE 480
M+ N + SK+L A+T CQE F E E LGD++LK+ S+ LF Y HE
Sbjct: 1394 MI------NYPVLASKILGALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1447
Query: 481 GLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG----------------- 523
G L+ + +++SN L + L +I+ + F P W PG
Sbjct: 1448 GQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLF 1507
Query: 524 ---------------DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLS 568
N E+ D L ++ Y + + SKT+ADVVEALIG +
Sbjct: 1508 DQERSISKIERMDCHTNGYEDEMEDGELESDSSSY----RVLSSKTLADVVEALIGVYYV 1563
Query: 569 TGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAE--RLVNVRHLESLLNYSFRDPSL 623
GG+N + IGI+++F E + F V R V+ LE LN F D L
Sbjct: 1564 EGGKNAANHLMKWIGIQIEFDPDTMECTKKPFNVPDSILRSVDFDALEGALNMKFNDRGL 1623
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
LVE++TH S + CYQRLEF+GDAVLD+LIT +L+ Y L PG LTD+R+A+VNN
Sbjct: 1624 LVESITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNN 1682
Query: 684 DCYALSSVKHGLHKHILHASQELYKWINITVDSFE-RLSLE--STFGWESETSFPKALGD 740
+ +A +VKH LH H+ H S L K I V + LS ++FG + PK LGD
Sbjct: 1683 ENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQVELSKPGFNSFGL-GDCKAPKVLGD 1741
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTV 800
I+ES++GAIF+DSG + VV++ +PLL PM+TPET+ + P REL E CQ+ ++
Sbjct: 1742 IVESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYK- 1800
Query: 801 APRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASK 839
A RI A TVEV +G A + KK+A K
Sbjct: 1801 ASRIGNLA--TVEVFIDG-----VQVGAAQNPQKKMAQK 1832
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
+++R+ KP + + C L LP N P + + +++ +Q CL ACKKLH+
Sbjct: 906 FIMERHEKPGGPTEYS-----CKLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHE 960
Query: 85 IGALTDNLLPDVVV---EEHDAQKHGNEPY--DAEHPIYFPPELVN-------QCPQDTK 132
+GA TD LLPD E D Q +P A H ++P + + +D
Sbjct: 961 MGAFTDMLLPDKGSGGEREKDEQTDEGDPLPGTARHREFYPEGVADILKGEWILSEKDAC 1020
Query: 133 ITY---HCYLIELK-QNFNYD-----IPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT- 182
Y H Y+ +K +N + + + EL++E+ ++ DL + R T
Sbjct: 1021 NNYKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTVTTK 1080
Query: 183 VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G I +T ++ + F + L +++D +++
Sbjct: 1081 ASLVFSGLINITESQLASLKSFHVRLMSIVLDVDVE 1116
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 791 FDLAKTVLAYIQSRGRARKPGSDYILMVER 820
>gi|225453660|ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
Length = 1971
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 216/616 (35%), Positives = 316/616 (51%), Gaps = 84/616 (13%)
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFD 344
+ +V HSG+ +Y+ V + A + F R +G G + +Y +Y ++YG++L +
Sbjct: 1278 LVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYADYYRQKYGVELIYK 1337
Query: 345 QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGPMSLSTFYSF 399
Q+ L+ GR + + +N LS + + E + + LPPELC + P+ S S
Sbjct: 1338 QQPLIRGRGVSYCKNLLSPRFEHSEGESDETLDKTYYVFLPPELC--FVHPLPGSLVRSA 1395
Query: 400 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLG 459
+PSIM R++S+LLAV LK+++ N +P +K+LEA+T CQE F E E LG
Sbjct: 1396 QRLPSIMRRVESMLLAVQLKDVI------NYPVPAAKILEALTAASCQETFCYERAELLG 1449
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
D++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ + F P W
Sbjct: 1450 DAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQADRFAPSRW 1509
Query: 520 MIPG----------------------------------DNSGSYELNDHSLFNERKIYVT 545
PG D E+ D L ++ Y
Sbjct: 1510 AAPGVLPVFDEDTKETESSLFDHERPFSETAPGNDRHGDGYDDDEMEDGELESDSSSY-- 1567
Query: 546 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----------VNVPYE 594
+ + SKT+ADVVEALIG + GG+N + IGI+V+F NVP
Sbjct: 1568 --RVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQVEFDPEDIVCATGPCNVPE- 1624
Query: 595 RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 654
R VN LE LN F + LL+EA+TH S + CYQRLEF+GDAVLD
Sbjct: 1625 -----SILRSVNFDTLEGALNIKFNNRGLLIEAITHASRPSSGVS-CYQRLEFVGDAVLD 1678
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
+LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K I V
Sbjct: 1679 HLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHIHLRHGSSALEKQIRDFV 1738
Query: 715 ----DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
D + S FG + PK LGDI+ES++GAIF+DSG + VV++ +PLL P
Sbjct: 1739 KEVQDELSKPGFNS-FGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHP 1796
Query: 771 MITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADK 830
M+TPET+ + P REL E CQ+ ++ N TVEV +G + K
Sbjct: 1797 MVTPETLPMHPVRELQERCQQQAEGLEYKATRSGN---LATVEVFIDGVQIGIAQ-NPQK 1852
Query: 831 ETAKKVASKEVLKSLK 846
+ A+K+A++ L LK
Sbjct: 1853 KMAQKLAARNALVVLK 1868
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
+++R+ KP + + C L LP N P + + +++ +Q CL ACKKLH+
Sbjct: 930 FIMERHEKPGGPTEYS-----CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHE 984
Query: 85 IGALTDNLLPDVVVEEHDAQKHGNE-----PYDAEHPIYFPPELVNQCPQD--------- 130
+GA TD LLPD E + N+ P A H ++P + N +
Sbjct: 985 MGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYPEGVANVLQGEWILLGKDGC 1044
Query: 131 -TKITYHCYLIELK-QNFN-----YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT- 182
+ H Y+ +K NF + D V+ EL++E+ ++ DL + R +T
Sbjct: 1045 NSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELDAEVLSISMDLFIARTMVTK 1104
Query: 183 VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G I +T ++ + F + L +++D +++
Sbjct: 1105 ASLVFWGPIDITESQLASLKSFHVRLMSIVLDVDVE 1140
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 815 FDLAKTVLAYIQSRGRARKPGSDYILMVER 844
>gi|356571277|ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1942
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 222/640 (34%), Positives = 332/640 (51%), Gaps = 79/640 (12%)
Query: 253 ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCM--IYNSVVCTPHSGQIYYITGVL 310
AS P ++ K+ + +N +++ + CT + +V HSG+ +Y+ +
Sbjct: 1217 ASGLVPNRDAMQTQKHINMTTNGKLMMADT---CTNAEDLIGKIVTAAHSGKRFYVDSIR 1273
Query: 311 GHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCR 365
++A + F R +G G + +Y +Y+++YG+ L + Q+ L+ GR + + +N LS
Sbjct: 1274 YDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLIYRQQPLIRGRGVSYCKNLLSPRF 1333
Query: 366 QEKQREPSKISFE-----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKN 420
+ + E + + LPPELC ++ P+ S +PSIM R++S+LLAV LKN
Sbjct: 1334 EHSEGESEETHDKTYYVFLPPELC--LVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKN 1391
Query: 421 MLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHE 480
M+ N + SK+LEA+T CQE F E E LGD++LK+ S+ LF Y HE
Sbjct: 1392 MI------NYPVQASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1445
Query: 481 GLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG----------DNSGSY- 529
G L+ + +++SN L + L +I+ + F P W PG D S
Sbjct: 1446 GQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLF 1505
Query: 530 ---------------------ELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLS 568
E+ D L ++ Y + + SKT+ADVVEALIG +
Sbjct: 1506 DQERSISKIERMDCHTDGYEDEMEDGELESDSSSY----RVLSSKTLADVVEALIGVYYV 1561
Query: 569 TGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAE--RLVNVRHLESLLNYSFRDPSL 623
GG+N + +GI+++F + + F V R V+ LE LN F+D L
Sbjct: 1562 EGGKNAANHLMKWMGIQIEFDPDTMDCTRKPFNVPDSILRSVDFDALEGALNMKFKDRGL 1621
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
LVE++TH S + CYQRLEF+GDAVLD+LIT +L+ Y L PG LTD+R+A+VNN
Sbjct: 1622 LVESITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNN 1680
Query: 684 DCYALSSVKHGLHKHILHASQELYKWINITV----DSFERLSLESTFGWESETSFPKALG 739
+ +A +VKH LH H+ H S L K I V D + S FG + PK LG
Sbjct: 1681 ENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQDELSKPGFNS-FGL-GDCKAPKVLG 1738
Query: 740 DIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKT 799
DI+ES++GAIF+DSG + VV++ +PLL PM+TPET+ + P REL E CQ+ ++
Sbjct: 1739 DILESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYK 1798
Query: 800 VAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASK 839
A RI A TVEV +G A + KK+A K
Sbjct: 1799 -ASRIGNLA--TVEVFIDG-----VQVGAAQNPQKKMAQK 1830
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
+++R+ KP + + C L LP N P + + +++ +Q CL ACKKLH+
Sbjct: 904 FIMERHEKPGGPTEYS-----CKLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHE 958
Query: 85 IGALTDNLLPDVVV---EEHDAQKHGNEPY--DAEHPIYFPPELVNQCPQDTKIT----- 134
+GA TD LLPD +E D Q +P A H ++P + + + ++
Sbjct: 959 MGAFTDMLLPDKGSGGEKEKDEQTDEGDPLPGTARHREFYPEGVADILKGEWILSGKDAC 1018
Query: 135 -----YHCYLIELK-QNFNYD-----IPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT- 182
H Y+ +K +N + + + EL++E+ ++ DL + R T
Sbjct: 1019 NNSKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTVTTK 1078
Query: 183 VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G I +T ++ + F + L +++D +++
Sbjct: 1079 SSLVFRGLISITESQLASLKSFHVRLMSIVLDVDVE 1114
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 789 FDLAKTVLAYIQSRGRARKPGSDYILMVER 818
>gi|356509849|ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 1671
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 263/885 (29%), Positives = 413/885 (46%), Gaps = 100/885 (11%)
Query: 48 CTLYLPNNCPIQTVIAQG--NIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP+N QT+I +++ K AC EACKKLHQ+GAL ++L+P + D
Sbjct: 635 CKLILPSNSAFQTIIGPSGKDMRLAKHLACFEACKKLHQMGALNEHLVPLIEDSSEDDHI 694
Query: 106 HGNEPYDAEHPIYFPPELVNQC----------PQDTKITYHCYLIELKQNFNYDIPAHDI 155
N+ + EL + + T++ ++ Y E N +I +
Sbjct: 695 VKNKESSSGAGTTKRKELHGKANIHALSGAWGDKLTRVKFNAYKFEFTCNIVSEIYS-GF 753
Query: 156 VLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALF-----R 210
L + +EL+ ++ VN DL + + ++ G++ L ++++ + F F R
Sbjct: 754 ALLIESELDEDVGNVNLDLYLVSKIVKASVSSCGQVDLDAEQMMRAKCFHELFFNGLFGR 813
Query: 211 VIMDHNLDKLNEIL-----KGLW-----------------LRDNLEIDYLLLPASEQSID 248
+++ E L LW +L+I++ + + +I
Sbjct: 814 LVLKSKSAGEREFLLQKDTNSLWSPKHLYLLLPLEKLNDICEGSLQINWCGINSCASAIK 873
Query: 249 W--EPVASLSFPCD----IGLKHHKNCSTMS--NARVVQTKSGPLCTCMIYNSVVCTPHS 300
+ + ++ CD I H + S M A + + + I + VV H+
Sbjct: 874 FLRRKFSLVTGDCDDNGTITSPHDTSSSEMECVGANKIHFANCVVDADNIKDRVVLAIHT 933
Query: 301 GQIYYITGVLGHLNANSLFTRNDGGA---ITYKKHYEERYGIQLCFDQELLLNGRRIFHA 357
G+IY I + +L+A S F N+ + IT+ ++ + YGI L + +L ++ +
Sbjct: 934 GKIYCIIEIDSNLSAESPFYGNNEKSKESITFSDYFSKSYGISLRHPGQPMLRLKQSHNP 993
Query: 358 QNYLSKCRQEKQREPSKIS---------FELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
N L +E + SKI +PPEL I+ + S +PS+M+R
Sbjct: 994 HNLLFNFYEEDK--SSKIGPAASKLPVHVHIPPELLYIL--DVKRDVLKSLYLLPSLMYR 1049
Query: 409 LQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAAS 468
++SL+L+ L+ + D I +S +LE++TT +C E F +E LE LGDS LKY S
Sbjct: 1050 IESLMLSSQLREEI-DGQTSKFNIRSSLILESLTTLRCSESFSMERLELLGDSVLKYVVS 1108
Query: 469 QQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-- 526
LF Y HEG LS ++ + N+ L KLG D KL G+IR F+P+ W+ PG S
Sbjct: 1109 CHLFLKYPKKHEGQLSARRSSAVCNSTLHKLGTDRKLQGYIRDSAFEPRRWVAPGQRSIH 1168
Query: 527 ------GSYELN---DHSLFNERKIYVTGRKKVK------SKTVADVVEALIGAFLSTGG 571
G L D E V G+ + SKT+AD VEALIGA+ GG
Sbjct: 1169 LVCCDCGLETLEVPLDAKFHTEDPKVVVGKFCDRGHCWMCSKTIADCVEALIGAYYVDGG 1228
Query: 572 ENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-----NVRHLESLLNYSFRDPSLLVE 626
L + +GI + + + R + LE + Y F LL+E
Sbjct: 1229 LFASLNVMKWLGIGAELELSLVDEAITAASLRTCLPKESEIASLEKKIGYEFSVKGLLLE 1288
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
A+TH S I CY+RLEFLGD+VLD LIT +LY + + PG LTD+RSASVNND +
Sbjct: 1289 AITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYQSHTDIDPGVLTDLRSASVNNDNF 1348
Query: 687 ALSSVKHGLHK----HILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDII 742
A +V+H LH+ ++ +++ + +S R SL S S PKALGD++
Sbjct: 1349 AQVAVRHNLHQHLLHSSGLLLSQISEYVKVISESDPR-SLPS-------ISAPKALGDVV 1400
Query: 743 ESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK-KTVA 801
ES+ GAI +D+ + + V+ LL P++TP+ + L P RELNE C + +K K
Sbjct: 1401 ESIVGAILIDTKLSLDQVWNVFYSLLSPIVTPDKLELPPFRELNELCDSLGYFVKVKENC 1460
Query: 802 PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ V V V L A+K+TAK A+ +LK L+
Sbjct: 1461 EKVGSAMHVEVSVQLPNALLVREGKGANKKTAKGEAAFYLLKDLE 1505
>gi|168010516|ref|XP_001757950.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162690827|gb|EDQ77192.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1662
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 212/617 (34%), Positives = 328/617 (53%), Gaps = 76/617 (12%)
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFD 344
+ +V HSG+ +Y+ V + A+S F + DG G + +Y +Y+++YG++L
Sbjct: 957 LVGRIVTAVHSGKRFYVDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVELVCK 1016
Query: 345 QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE---------LPPELCRIIMGPMSLST 395
++ LL GR + H +N LS R E + S + LPPELC ++ P+ S
Sbjct: 1017 KQPLLRGRGVSHCKNLLSP-RFETSTGGTLDSLDALDKTYYVMLPPELC--LIHPLPGSL 1073
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESL 455
+PS+M R++S+LLA+ LK+ + + I SKVLEA+T CQE F E
Sbjct: 1074 VRGAQRLPSVMRRVESMLLAIQLKHQI------DYPIAASKVLEALTAASCQETFSYERA 1127
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
E LGD++LK+ S++LF Y HEG L+ + +I+SN+ L + D L +I+ + F
Sbjct: 1128 ELLGDAYLKWVVSRRLFLKYPCKHEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQADRFA 1187
Query: 516 PKMWMIPG------DNSGSYELNDHSLFNERKIYV------------------------- 544
P W PG ++ + +D SL E V
Sbjct: 1188 PSRWAAPGVPPVFDEDIKDGDDSDKSLKAEASREVVEIVSEEGEIVVKELSTESASMEDG 1247
Query: 545 ------TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF- 597
+ + + SKT+ADVVEA IG + GG++ ++ IGI V+F + E
Sbjct: 1248 EIEGDSSAYRVLSSKTLADVVEAFIGIYYVEGGQDAATHLMNWIGIPVEFDDAEAELAIG 1307
Query: 598 --QVQAERLVNVR--HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+V ++++ LE+ + + FR SLLVEA+TH S +P CYQRLEF+GDAVL
Sbjct: 1308 GCEVPETVMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVP-CYQRLEFVGDAVL 1366
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
DYLIT +L+ KY L PG LTD+R+A+VNN+ +A +VKH H H+ H S L I
Sbjct: 1367 DYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGSSALETQIRNF 1426
Query: 714 VDSFERLSLE----STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
V+ + L+ ++FG + PK LGDI+ES++GA+F+D+ + V++ PLL+
Sbjct: 1427 VNDIQ-TELDKPGVNSFGL-GDFKAPKVLGDILESIAGALFLDACLETDHVWKVFEPLLQ 1484
Query: 770 PMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADAD 829
PM+TPET+ + P REL E CQ+ +++ + N TVEV+ +G +A
Sbjct: 1485 PMVTPETLPMHPVRELQERCQQQAEALEYKASRAGN---VATVEVYVDGVQIGSAQ-NAQ 1540
Query: 830 KETAKKVASKEVLKSLK 846
K+ A+K+A++ L LK
Sbjct: 1541 KKMAQKLAARNALVILK 1557
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 32/220 (14%)
Query: 31 RYFKPTPKFDINK---EMGI----CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKK 81
RY P+F +NK + G C L LP N P++ V +++ +Q+ CLEACK+
Sbjct: 599 RYSILRPEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVCLEACKR 658
Query: 82 LHQIGALTDNLLPDVVVEEHDAQKHGNE-----PYDAEHPIYFPPELVNQCPQD------ 130
LH++GA TD LLPD E A+ G+E P + H Y+P + + D
Sbjct: 659 LHEMGAFTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGDWILADK 718
Query: 131 -------TKITYHCYLIELKQ-NFNYD---IPAHDIVLAVRTELESEIKKVNFDLEVDRG 179
+ + + Y+++ + F+ D D V+ V +L+ E+ + DL V R
Sbjct: 719 DPDAKPGSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDEVLDMTMDLFVART 778
Query: 180 RLT-VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+T +L+ G + L+ ++ + F + L +++D N+D
Sbjct: 779 MITRASLEFCGNLDLSLHELTDLKSFHVRLMSIVLDVNVD 818
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 492 FDLAKTVLAYIQSRGRARKPGSDYILMLER 521
>gi|255548081|ref|XP_002515097.1| dicer-1, putative [Ricinus communis]
gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis]
Length = 1543
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 216/618 (34%), Positives = 320/618 (51%), Gaps = 85/618 (13%)
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFD 344
+ +V HSG+ +Y+ + + A + F R +G G + +Y +Y+++YG++L F
Sbjct: 847 LVGRIVTAAHSGKRFYVDSIRYDMTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELMFK 906
Query: 345 QELLLNGRRIFHAQNYLS---------KCRQEKQREPSKISFELPPELCRIIMGPMSLST 395
Q+ L+ GR + + +N LS + E+ + + F LPPELC ++ P+ S
Sbjct: 907 QQPLIRGRGVSYCKNLLSPRFEHSDSNEGESEEILDKTYYVF-LPPELC--LVHPLPGSL 963
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESL 455
+PSIM R++S+LLA+ LK+++ + ++P K+LEA+T CQE F E
Sbjct: 964 VRGAQRLPSIMRRVESMLLAIQLKDII------HYSVPALKILEALTAASCQETFCYERA 1017
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ + F
Sbjct: 1018 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALIKGLQSYIQADRFA 1077
Query: 516 PKMWMIPG-----DNSGSYELNDHSLFNERKIYVTGRKKV-------------------- 550
P W PG D + D SLF++ K + + KV
Sbjct: 1078 PSRWAAPGVLPVFDED--TKDGDSSLFDQEKSLIENKPKVDHADDGYEDDEIEDGELESD 1135
Query: 551 -------KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----------VNVP 592
SKT+ADVVEALIG + GG+ + IGIKV+F NVP
Sbjct: 1136 SSSYRVLSSKTLADVVEALIGIYYVEGGKTAANHLMRWIGIKVEFDHEEIDSAIRPSNVP 1195
Query: 593 YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 652
R ++ LE LN F+D LLVEA+TH S + CYQRLEF+GDAV
Sbjct: 1196 E------SILRSIDFDALEGALNIKFQDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAV 1248
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI 712
LD+LIT +L+ Y L PG LTD+R+A+VNN+ +A +V H LH H+ H S L K I
Sbjct: 1249 LDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVNHKLHVHLRHGSSALEKQIRD 1308
Query: 713 TV----DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
V D + S FG + PK LGDI+ES++GAIF+DSG + VV++ +PLL
Sbjct: 1309 FVREVQDELSKPGFNS-FGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLL 1366
Query: 769 EPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADA 828
PM+TPET+ + P REL E CQ+ ++ N TVEV +G +
Sbjct: 1367 HPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGN---LATVEVFIDGVQVGVAQ-NP 1422
Query: 829 DKETAKKVASKEVLKSLK 846
K+ A+K+A++ L LK
Sbjct: 1423 QKKMAQKLAARNALVILK 1440
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP+N P + + +++ +Q CL ACKKLH++GA TD LLPD E Q
Sbjct: 515 CKLQLPSNVPFEKLEGPLCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEREQV 574
Query: 106 HGNE-----PYDAEHPIYFPPELVN-------QCPQD----TKITYHCYLIELK------ 143
N+ P A H ++P + N C +D + H Y+ +K
Sbjct: 575 DQNDEGEPLPGTARHREFYPEGVANILQGEWILCGRDGWNNSNKLLHLYMYAVKCVNSGA 634
Query: 144 QNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCR 202
+ + + EL++E+ ++ DL + R +T +L G I +T +++ +
Sbjct: 635 SKDPFLTQVSEFAVLFGNELDAEVLSMSMDLFIARTIITKASLVFRGPIDITENQLASLK 694
Query: 203 RFQIALFRVIMDHNLD 218
F + L +++D +++
Sbjct: 695 SFHVRLMSIVLDVDVE 710
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 384 FDLAKTVLAYIQSRGRARKPGSDYILMVER 413
>gi|15223286|ref|NP_171612.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|34922211|sp|Q9SP32.2|DCL1_ARATH RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=AtDCL1; AltName:
Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein
CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS
1; AltName: Full=Protein SUSPENSOR 1
gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]
gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]
gi|332189099|gb|AEE27220.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1909
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 311/588 (52%), Gaps = 81/588 (13%)
Query: 288 CMI----YNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYG 338
CM+ +V HSG+ +Y+ + ++A + F R +G G + TY +Y+++YG
Sbjct: 1205 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYG 1264
Query: 339 IQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGPMSL 393
+ L Q+ L+ GR + + +N LS R E+ E + + LPPELC ++ P+S
Sbjct: 1265 VDLNCKQQPLIKGRGVSYCKNLLSP-RFEQSGESETVLDKTYYVFLPPELC--VVHPLSG 1321
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
S +PSIM R++S+LLAV LKN++ + IPTSK+LEA+T CQE F E
Sbjct: 1322 SLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYE 1375
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ +
Sbjct: 1376 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADR 1435
Query: 514 FDPKMWMIPG----------DNSGSY-------------------ELNDHSLFNERKIYV 544
F P W PG D S+ E+ D L + Y
Sbjct: 1436 FAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSY- 1494
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPY 593
+ + SKT+ADVVEALIG + GG+ + IGI V+ VNVP
Sbjct: 1495 ---RVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPE 1551
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+ ++ LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVL
Sbjct: 1552 ------SVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVL 1604
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LIT +L+ Y +L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K I
Sbjct: 1605 DHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREF 1664
Query: 714 VDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
V + S + ++FG + PK LGDI+ES++GAIF+DSG + ++ +PLL+P
Sbjct: 1665 VKEVQTESSKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQP 1723
Query: 771 MITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
M+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1724 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDG 1768
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 748 FDLAKTVLAYIQSRGRARKPGSDYILMVER 777
>gi|334182203|ref|NP_001184881.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|332189100|gb|AEE27221.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1910
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 311/588 (52%), Gaps = 81/588 (13%)
Query: 288 CMI----YNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYG 338
CM+ +V HSG+ +Y+ + ++A + F R +G G + TY +Y+++YG
Sbjct: 1206 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYG 1265
Query: 339 IQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGPMSL 393
+ L Q+ L+ GR + + +N LS R E+ E + + LPPELC ++ P+S
Sbjct: 1266 VDLNCKQQPLIKGRGVSYCKNLLSP-RFEQSGESETVLDKTYYVFLPPELC--VVHPLSG 1322
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
S +PSIM R++S+LLAV LKN++ + IPTSK+LEA+T CQE F E
Sbjct: 1323 SLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYE 1376
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ +
Sbjct: 1377 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADR 1436
Query: 514 FDPKMWMIPG----------DNSGSY-------------------ELNDHSLFNERKIYV 544
F P W PG D S+ E+ D L + Y
Sbjct: 1437 FAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSY- 1495
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPY 593
+ + SKT+ADVVEALIG + GG+ + IGI V+ VNVP
Sbjct: 1496 ---RVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPE 1552
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+ ++ LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVL
Sbjct: 1553 ------SVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVL 1605
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LIT +L+ Y +L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K I
Sbjct: 1606 DHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREF 1665
Query: 714 VDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
V + S + ++FG + PK LGDI+ES++GAIF+DSG + ++ +PLL+P
Sbjct: 1666 VKEVQTESSKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQP 1724
Query: 771 MITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
M+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1725 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDG 1769
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 748 FDLAKTVLAYIQSRGRARKPGSDYILMVER 777
>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 311/588 (52%), Gaps = 81/588 (13%)
Query: 288 CMI----YNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYG 338
CM+ +V HSG+ +Y+ + ++A + F R +G G + TY +Y+++YG
Sbjct: 1205 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYG 1264
Query: 339 IQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGPMSL 393
+ L Q+ L+ GR + + +N LS R E+ E + + LPPELC ++ P+S
Sbjct: 1265 VDLNCKQQPLIKGRGVSYCKNLLSP-RFEQSGESETVLDKTYYVFLPPELC--VVHPLSG 1321
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
S +PSIM R++S+LLAV LKN++ + IPTSK+LEA+T CQE F E
Sbjct: 1322 SLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYE 1375
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ +
Sbjct: 1376 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADR 1435
Query: 514 FDPKMWMIPG----------DNSGSY-------------------ELNDHSLFNERKIYV 544
F P W PG D S+ E+ D L + Y
Sbjct: 1436 FAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSY- 1494
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPY 593
+ + SKT+ADVVEALIG + GG+ + IGI V+ VNVP
Sbjct: 1495 ---RVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPE 1551
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+ ++ LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVL
Sbjct: 1552 ------SVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVL 1604
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LIT +L+ Y +L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K I
Sbjct: 1605 DHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREF 1664
Query: 714 VDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
V + S + ++FG + PK LGDI+ES++GAIF+DSG + ++ +PLL+P
Sbjct: 1665 VKEVQTESSKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQP 1723
Query: 771 MITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
M+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1724 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDG 1768
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 748 FDLAKTVLAYIQSRGRARKPGSDYILMVER 777
>gi|357114316|ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
distachyon]
Length = 1888
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 209/604 (34%), Positives = 324/604 (53%), Gaps = 67/604 (11%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
VV HSG+ +Y+ + ++NA + F R +G G + +Y +Y+++YG++L + ++ L
Sbjct: 1192 VVTAAHSGKRFYVDSICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYTKQPL 1251
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKISFE----------LPPELCRIIMGPMSLSTFYS 398
+ R + + +N LS R E ++F LPPELC ++ P+ S
Sbjct: 1252 IRARGVSYCKNLLSP-RFEHSEAKEGVNFSENHDKTYYVYLPPELC--VVHPLPGSLVRG 1308
Query: 399 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETL 458
+PSIM R++S+LLAV LK ++ + +P +K+LEA+T CQE F E E L
Sbjct: 1309 AQRLPSIMRRVESMLLAVQLKEII------DYPVPATKILEALTAASCQETFCYERAELL 1362
Query: 459 GDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM 518
GD++LK+ S+ LF Y HEG L+ + +++SN L + + L +I+ + F P
Sbjct: 1363 GDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALNKTLQSYIQADRFAPSR 1422
Query: 519 WMIPGD----NSGSYELNDHSLFNERKIYVTGRKK------------------------- 549
W PG + + E ++ S+F E + +K
Sbjct: 1423 WAAPGVLPVFDEETRE-SEPSIFGEEPVLGNEVQKDFDDDYADSIQEDGEIDGDSGCYRV 1481
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYERQFQVQAE--RLV 605
+ SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +
Sbjct: 1482 LSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPQEIPPPKIYNIPDSIMRSI 1541
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N LES++ F++ LVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1542 NFDTLESIMGIKFQNKGFLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITKHLFFTY 1600
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-DSFERLSLE- 723
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L I V D E +S
Sbjct: 1601 TDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVREEISKSG 1660
Query: 724 -STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPA 782
++FG + PK LGDIIES++GAIF+DSG + V++ +PLL+PM+TPET+ + P
Sbjct: 1661 FNSFGL-GDCKAPKVLGDIIESIAGAIFLDSGYDTSAVWKVFQPLLDPMVTPETLPMHPI 1719
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
REL E CQ+ ++ + N TVEV +G + K+ A+K+A++ L
Sbjct: 1720 RELQERCQQQAEGLEYKASRAGN---VATVEVFVDGIQIGVAQ-NPQKKMAQKLAARNAL 1775
Query: 843 KSLK 846
LK
Sbjct: 1776 VVLK 1779
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP N P + + +I+ +Q CL ACKKLH++ A TD LLPD + E + +
Sbjct: 859 CKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMSAFTDMLLPDRGIGEGEKTE 918
Query: 106 HGNE----PYDAEHPIYFPPELVN-----------QCPQDTK-ITYHCYLIEL------K 143
+E P A H ++P + C Q ++ I + Y + K
Sbjct: 919 QNDEGDPVPGTARHREFYPEGVAEVLRGEWILSGRDCCQSSQFIKLYMYYVNCVDVGTSK 978
Query: 144 QNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCR 202
F + IV EL++E+ + DL V + +T +L G I++T +++L +
Sbjct: 979 DPFLAQLSNFSIVFG--NELDAEVLSMTMDLFVAKTMITKASLVFHGPIEITERQLVLLK 1036
Query: 203 RFQIALFRVIMDHNLD 218
F + L +++D ++D
Sbjct: 1037 SFHVRLMSIVLDVDVD 1052
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 728 FDLAKTVLAYIQSRGRARKPGSDYILMVER 757
>gi|115441737|ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3a; AltName:
Full=Dicer-like protein 3a; Short=OsDCL3a
gi|56785369|dbj|BAD82327.1| putative Endoribonuclease Dicer homolog [Oryza sativa Japonica Group]
gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa Japonica Group]
Length = 1651
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 265/897 (29%), Positives = 417/897 (46%), Gaps = 107/897 (11%)
Query: 34 KPTPKFDINKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGALTDN 91
KPT +F + + +CTL LP + +Q ++ N+ KQ CL+ACKKLH++GAL D+
Sbjct: 607 KPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDH 666
Query: 92 L-------LPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQ 144
L +P++V + + + N + T + Y K
Sbjct: 667 LCLSVEDPVPEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY----KM 722
Query: 145 NFNYDIPAH---DIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLC 201
NF D + VL + L E+ + DL + + ++ G ++L ++
Sbjct: 723 NFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQA 782
Query: 202 RRFQIALFRVIMDHNLDK-----------LNEILKGLWLRDNLEIDYLLLPA-----SEQ 245
+ FQ LF + + LN+ +W N YLLLP S
Sbjct: 783 KLFQGLLFNGLFGKLFTRSKVPNAPREFILNKEDTFVW---NTASVYLLLPTNPSFDSNV 839
Query: 246 SIDWEPVASLSFPCDIGLKHHKNC---------STMSNARVVQTKSGPLCTCMIYNSVVC 296
I+W + + + + + + S + ++ + + + VV
Sbjct: 840 CINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVL 899
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGA-------ITYKKHYEERYGIQLCFDQELLL 349
H+G+IY + L+ +S F DG + T+ ++++++YGI L + LL
Sbjct: 900 AVHTGKIYTALDIT-ELSGDSAF---DGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLL 955
Query: 350 NGRRIFHAQNYLSKCRQEKQREPSKIS------------FELPPELCRIIMGPMSLSTFY 397
+ + N LS +++ +S +PPEL +I + +
Sbjct: 956 VLKPSHNPHNLLSSKFRDEGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILR 1013
Query: 398 SFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLET 457
SF P++M+R++SL LA L++ + + I + +LEAITT +C E F +E LE
Sbjct: 1014 SFYLFPALMYRIESLTLASQLRSEI---GYSDSNISSFLILEAITTLRCSEDFSMERLEL 1070
Query: 458 LGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPK 517
LGDS LKYA S LF + N EG LS + +I NA L KLG + + G++R FDP+
Sbjct: 1071 LGDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPR 1130
Query: 518 MWMIPGDNS-----------GSYELNDHSLFNERKIYV-----TGRKKVKSKTVADVVEA 561
W+ PG S +D + +++ I + G + + SKT+AD VEA
Sbjct: 1131 RWLAPGQLSIRPSPCECPVKSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCVEA 1190
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR----------HLE 611
+IGA+ + GG + L +GI + E VQA +V+ LE
Sbjct: 1191 IIGAYYAGGGLRAAMAVLKWLGIGAEI-----EEDLIVQAILSASVQTYLPKDNVFEMLE 1245
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ L YSF LLVEALTH S CY+RLEFLGDAVLD L+T YL+N + + G
Sbjct: 1246 AKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEG 1305
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST-FGWES 730
+LTD+RSASVNN+ +A +VKH H + H+S L I V+ E S++ +
Sbjct: 1306 ELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDG 1365
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQ 790
PK LGDI+ES++GAI +D+ + +VV+ PLL P++TPE + L P REL E+C
Sbjct: 1366 LPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCG 1425
Query: 791 KHHFSMKKTVAPRINGKAAV-TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
KH + + + R G V T++V L ++ AK AS +LK L+
Sbjct: 1426 KHGYFV--GINCRDQGDTVVATLDVQLKEVLLVRQGFSKKRKDAKAHASSLLLKDLE 1480
>gi|374259482|gb|AEZ02177.1| Dicer [Arabidopsis thaliana]
Length = 1886
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 311/588 (52%), Gaps = 81/588 (13%)
Query: 288 CMI----YNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYG 338
CM+ +V HSG+ +Y+ + ++A + F R +G G + TY +Y+++YG
Sbjct: 1182 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYG 1241
Query: 339 IQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGPMSL 393
+ L Q+ L+ GR + + +N LS R E+ E + + LPPELC ++ P+S
Sbjct: 1242 VDLNCKQQPLIKGRGVSYCKNLLSP-RFEQSGESETVLDKTYYVFLPPELC--VVHPLSG 1298
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
S +PSIM R++S+LLAV LKN++ + IPTSK+LEA+T CQE F E
Sbjct: 1299 SLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYE 1352
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ +
Sbjct: 1353 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADR 1412
Query: 514 FDPKMWMIPG----------DNSGSY-------------------ELNDHSLFNERKIYV 544
F P W PG D S+ E+ D L + Y
Sbjct: 1413 FAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSY- 1471
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPY 593
+ + SKT+ADVVEALIG + GG+ + IGI V+ VNVP
Sbjct: 1472 ---RVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPE 1528
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+ ++ LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVL
Sbjct: 1529 ------SVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVL 1581
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LIT +L+ Y +L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K I
Sbjct: 1582 DHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREF 1641
Query: 714 VDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
V + S + ++FG + PK LGDI+ES++GAIF+DSG + ++ +PLL+P
Sbjct: 1642 VKEVQTESSKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQP 1700
Query: 771 MITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
M+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1701 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDG 1745
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 48 CTLYLPNNCPIQTVIAQG----NIKTLKQTACLEACKKLHQIGALTDNLLPDVV----VE 99
C L LP N P + I +G +++ +Q CL ACKKLH++GA TD LLPD E
Sbjct: 879 CRLQLPCNAPFE--ILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAE 936
Query: 100 EHDAQKHGNE-PYDAEHPIYFP 120
+ D G P A H ++P
Sbjct: 937 KADQDDEGEPVPGTARHREFYP 958
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 748 FDLAKTVLAYIQSRGRARKPGSDYILMVER 777
>gi|125542181|gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
Length = 1883
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 321/603 (53%), Gaps = 67/603 (11%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
VV HSG+ +Y+ + ++NA + F R +G G + +Y +Y+++YG++L + ++ L
Sbjct: 1189 VVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPL 1248
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKIS--------FELPPELCRIIMGPMSLSTFYSFT 400
+ R + + +N LS + S LPPELC ++ P+ S
Sbjct: 1249 IRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 1306
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSIM R++S+LLAV LK+++ + +P +K+LEA+T CQE F E E LGD
Sbjct: 1307 RLPSIMRRVESMLLAVQLKDII------DYPVPATKILEALTAASCQETFCYERAELLGD 1360
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
++LK+ S+ LF Y HEG L+ + +++SN L + + L +I+ + F P W
Sbjct: 1361 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWA 1420
Query: 521 IPG------DNSGSYELNDHSLFNERKIYVTGRKK------------------------V 550
PG + S YE S+F+E +K+ +
Sbjct: 1421 APGVLPVFDEESREYE---PSIFDEESTGCELQKESYDDYADNMQEDGEIEGDSSCYRVL 1477
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYERQFQVQAE--RLVN 606
SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +N
Sbjct: 1478 SSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSIN 1537
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ +L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYT 1596
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE--- 723
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L I V + L+
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
++FG + PK LGDI+ES++GAIF+DSG + VV++ +PLL PM+TPET+ + P R
Sbjct: 1657 NSFGL-GDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVR 1715
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E CQ+ ++ + N TVEV +G + K+ A+K+A++ L
Sbjct: 1716 ELQERCQQQAEGLEYKASRAGN---IATVEVFVDGVQIGVAQ-NPQKKMAQKLAARNALV 1771
Query: 844 SLK 846
LK
Sbjct: 1772 VLK 1774
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
++++Y KP + + C L LP N P + + +I+ +Q CL ACKKLH+
Sbjct: 840 FIMQKYEKPGGSVEYS-----CKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHE 894
Query: 85 IGALTDNLLPDVVVEEHDAQKHGNE----PYDAEHPIYFPPELVN--------------Q 126
+GA TD LLPD E + + +E P A H ++P + + Q
Sbjct: 895 MGAFTDTLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQ 954
Query: 127 CPQDTKI---TYHCYLIEL-KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT 182
Q K+ + +C + K +F + I+ EL++E+ DL V R +T
Sbjct: 955 NSQFIKLYMYSVNCVNVGTSKDSFVTQLSNFAIIFG--NELDAEVLSTTMDLFVARTMIT 1012
Query: 183 -VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G+I++T +++L + F + L +++D ++D
Sbjct: 1013 KASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVD 1049
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 725 FDLAKTVLAYIQSRGRARKPGSDYILMLER 754
>gi|157285009|gb|ABV31244.1| dicer-like 1 [Physcomitrella patens]
Length = 1662
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 327/617 (52%), Gaps = 76/617 (12%)
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFD 344
+ +V HSG+ +Y+ V + A+S F + DG G + +Y +Y+++YG++L
Sbjct: 957 LVGRIVTAVHSGKRFYMDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVELVCK 1016
Query: 345 QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE---------LPPELCRIIMGPMSLST 395
++ LL GR + H +N LS R E + S + LPPELC ++ P+ S
Sbjct: 1017 KQPLLRGRGVSHCKNLLSP-RFETSTGGTLDSLDALDKTYYVMLPPELC--LIHPLPGSL 1073
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESL 455
+PS+M R++S+LLA+ LK+ + + I SKVLEA+T CQE F E
Sbjct: 1074 VRGAQRLPSVMRRVESMLLAIQLKHQI------DYPIAASKVLEALTAASCQETFSYERA 1127
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
E LGD++LK+ S++LF Y HEG L+ + +I+SN+ L + D L +I+ + F
Sbjct: 1128 ELLGDAYLKWVVSRRLFLKYPCKHEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQADRFA 1187
Query: 516 PKMWMIPG------DNSGSYELNDHSLFNERKIYV------------------------- 544
P W PG ++ + +D SL E V
Sbjct: 1188 PSRWAAPGVPPVFDEDIKDGDDSDKSLKAEASREVVEIVSEEGEIVVKELSTESASMEDG 1247
Query: 545 ------TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF- 597
+ + + SKT+ADVVEA IG + GG++ ++ IGI V+F + E
Sbjct: 1248 EIEGDSSAYRVLSSKTLADVVEAFIGIYYVEGGQDAATHLMNWIGIPVEFDDAEAELAIG 1307
Query: 598 --QVQAERLVNVR--HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+V ++++ LE+ + + FR SLLVEA+TH S +P YQRLEF+GDAVL
Sbjct: 1308 GCEVPETVMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVP-GYQRLEFVGDAVL 1366
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
DYLIT +L+ KY L PG LTD+R+A+VNN+ +A +VKH H H+ H S L I
Sbjct: 1367 DYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGSSALETQIRNF 1426
Query: 714 VDSFERLSLE----STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
V+ + L+ ++FG + PK LGDI+ES++GA+F+D+ + V++ PLL+
Sbjct: 1427 VNDIQ-TELDKPGVNSFGL-GDFKAPKVLGDILESIAGALFLDACLETDHVWKVFEPLLQ 1484
Query: 770 PMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADAD 829
PM+TPET+ + P REL E CQ+ +++ + N TVEV+ +G +A
Sbjct: 1485 PMVTPETLPMHPVRELQERCQQQAEALEYKASRAGN---VATVEVYVDGVQIGSAQ-NAQ 1540
Query: 830 KETAKKVASKEVLKSLK 846
K+ A+K+A++ L LK
Sbjct: 1541 KKMAQKLAARNALVILK 1557
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 32/220 (14%)
Query: 31 RYFKPTPKFDINK---EMGI----CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKK 81
RY P+F +NK + G C L LP N P++ V +++ +Q+ CLEACK+
Sbjct: 599 RYSILRPEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVCLEACKR 658
Query: 82 LHQIGALTDNLLPDVVVEEHDAQKHGNE-----PYDAEHPIYFPPELVNQCPQD------ 130
LH++GA TD LLPD E A+ G+E P + H Y+P + + D
Sbjct: 659 LHEMGAFTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGDWILADK 718
Query: 131 -------TKITYHCYLIELKQ-NFNYD---IPAHDIVLAVRTELESEIKKVNFDLEVDRG 179
+ + + Y+++ + F+ D D V+ V +L+ ++ + DL V R
Sbjct: 719 DPDAKPGSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDQVLDMTMDLFVART 778
Query: 180 RLT-VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+T +L+ G + L+ ++ + F + L +++D N+D
Sbjct: 779 MITRASLEFCGNLDLSLHELTDLKSFHVRLMSIVLDVNVD 818
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 492 FDLAKTVLAYIQSRGRARKPGSDYILMLER 521
>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 316/606 (52%), Gaps = 71/606 (11%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAITYKK---HYEERYGIQLCFDQELL 348
VV HSG+ +Y+ + ++NA + F R +G G + Y +Y+++YG++L + ++ L
Sbjct: 614 VVTAAHSGKRFYVDSICYNMNAENSFPRKEGYLGPLEYSSFADYYKQKYGVELVYKKQPL 673
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKIS--------FELPPELCRIIMGPMSLSTFYSFT 400
+ R + + +N LS + + + S LPPELC ++ P+ S
Sbjct: 674 IRARGVSYCKNLLSPRFEHSEASNGEFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 731
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSIM R++S+LLA+ LK+++ +P +K+LEA+T CQE F E E LGD
Sbjct: 732 RLPSIMRRVESMLLAIQLKDII------GYPVPANKILEALTAASCQETFCYERAELLGD 785
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
++LK+ S+ LF Y HEG L+ + +++SN L + + L +I+ + F P W
Sbjct: 786 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMILYQYALNKNLQSYIQADRFAPSRWA 845
Query: 521 IPG---------------------------------DNSGSYELNDHSLFNERKIYVTGR 547
PG D G D + + Y
Sbjct: 846 APGVLPVFDEETRDSEPSIFDEEFTPSSELQKNLYDDYDGDSMQEDGEIEGDSSCY---- 901
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYERQFQVQAE--R 603
+ + SKT+ADVVEALIG + GG+ + IGI ++D +P + + + +
Sbjct: 902 RVLSSKTLADVVEALIGVYYVAGGKIATNHLMKWIGINAELDPQEIPSSKPYNIPESIIK 961
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
+N LE L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+
Sbjct: 962 SINFDTLEGALGIKFQNKGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITKHLFF 1020
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-DSFERLSL 722
Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L I V D E LS
Sbjct: 1021 TYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELSK 1080
Query: 723 E--STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ 780
++FG + PK LGDI ES++GAIF+DSGC VV++ +PLL+PM+TP+T+ +
Sbjct: 1081 PGFNSFGL-GDCKAPKVLGDIFESIAGAIFLDSGCATSVVWKVFQPLLDPMVTPDTLPMH 1139
Query: 781 PARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKE 840
P REL E CQ+ ++ + N TVEV +G + K+ A+K+A++
Sbjct: 1140 PVRELQERCQQQAEGLEYKASRTGN---VATVEVLVDGIQIGVAQ-NPQKKMAQKLAARN 1195
Query: 841 VLKSLK 846
L LK
Sbjct: 1196 ALVVLK 1201
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP N P + + +I+ +Q CL ACKKLH++GA TD LLPD E + +
Sbjct: 281 CKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDMLLPDRGSGEGEKTE 340
Query: 106 HGNE----PYDAEHPIYFPPELVN--------------QCPQDTKI---TYHCYLIELKQ 144
+E P A H +FP + Q Q K+ + +C I +
Sbjct: 341 QNDEGDPLPGTARHREFFPEGVAEILHGEWILSGRDGYQSSQFIKLYLYSVNCVNIGTSK 400
Query: 145 NFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCRR 203
+ + + L EL++E+ DL V R +T +L G I++T +++L +
Sbjct: 401 D-PFVTQLSNFALIFGNELDAEVLSTTMDLFVARTIITKASLVFRGPIEITESQLILLKS 459
Query: 204 FQIALFRVIMDHNLD 218
F + L +++D ++D
Sbjct: 460 FHVRLMSIVLDVDVD 474
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 150 FDLAKTVLAYIQSRGRARKPGSDYILMLER 179
>gi|125584735|gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
Length = 1883
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 320/603 (53%), Gaps = 67/603 (11%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
VV HSG+ +Y+ + ++NA + F R +G G + +Y +Y+++YG++L + ++ L
Sbjct: 1189 VVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPL 1248
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKIS--------FELPPELCRIIMGPMSLSTFYSFT 400
+ R + + +N LS + S LPPELC ++ P+ S
Sbjct: 1249 IRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 1306
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSIM R++S+LLAV LK+++ + +P +K+LEA+T CQE E E LGD
Sbjct: 1307 RLPSIMRRVESMLLAVQLKDII------DYPVPATKILEALTAASCQETLCYERAELLGD 1360
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
++LK+ S+ LF Y HEG L+ + +++SN L + + L +I+ + F P W
Sbjct: 1361 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWA 1420
Query: 521 IPG------DNSGSYELNDHSLFNERKIYVTGRKK------------------------V 550
PG + S YE S+F+E +K+ +
Sbjct: 1421 APGVLPVFDEESREYE---PSIFDEESTGCELQKESYDDYADNMQEDGEIEGDSSCYRVL 1477
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYERQFQVQAE--RLVN 606
SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +N
Sbjct: 1478 SSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSIN 1537
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ +L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYT 1596
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE--- 723
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L I V + L+
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
++FG + PK LGDI+ES++GAIF+DSG + VV++ +PLL PM+TPET+ + P R
Sbjct: 1657 NSFGL-GDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVR 1715
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E CQ+ ++ + N TVEV +G + K+ A+K+A++ L
Sbjct: 1716 ELQERCQQQAEGLEYKASRAGN---IATVEVFVDGVQIGVAQ-NPQKKMAQKLAARNALV 1771
Query: 844 SLK 846
LK
Sbjct: 1772 VLK 1774
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
++++Y KP + + C L LP N P + + +I+ +Q CL ACKKLH+
Sbjct: 840 FIMQKYEKPGGSVEYS-----CKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHE 894
Query: 85 IGALTDNLLPDVVVEEHDAQKHGNE----PYDAEHPIYFPPELVN--------------Q 126
+GA TD LLPD E + + +E P A H ++P + + Q
Sbjct: 895 MGAFTDTLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQ 954
Query: 127 CPQDTKI---TYHCYLIELKQN-FNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT 182
Q K+ + +C + ++ F + I+ EL++E+ DL V R +T
Sbjct: 955 NSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFG--NELDAEVLSTTMDLFVARTMIT 1012
Query: 183 -VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G+I++T +++L + F + L +++D ++D
Sbjct: 1013 KASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVD 1049
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 725 FDLAKTVLAYIQSRGRARKPGSDYILMLER 754
>gi|75330224|sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=OsDCL1
gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group]
gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza
sativa Japonica Group]
Length = 1883
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 320/603 (53%), Gaps = 67/603 (11%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
VV HSG+ +Y+ + ++NA + F R +G G + +Y +Y+++YG++L + ++ L
Sbjct: 1189 VVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPL 1248
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKIS--------FELPPELCRIIMGPMSLSTFYSFT 400
+ R + + +N LS + S LPPELC ++ P+ S
Sbjct: 1249 IRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 1306
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSIM R++S+LLAV LK+++ + +P +K+LEA+T CQE E E LGD
Sbjct: 1307 RLPSIMRRVESMLLAVQLKDII------DYPVPATKILEALTAASCQETLCYERAELLGD 1360
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
++LK+ S+ LF Y HEG L+ + +++SN L + + L +I+ + F P W
Sbjct: 1361 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWA 1420
Query: 521 IPG------DNSGSYELNDHSLFNERKIYVTGRKK------------------------V 550
PG + S YE S+F+E +K+ +
Sbjct: 1421 APGVLPVFDEESREYE---PSIFDEESTGCELQKESYDDYADNMQEDGEIEGDSSCYRVL 1477
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYERQFQVQAE--RLVN 606
SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +N
Sbjct: 1478 SSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSIN 1537
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ +L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYT 1596
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE--- 723
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L I V + L+
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
++FG + PK LGDI+ES++GAIF+DSG + VV++ +PLL PM+TPET+ + P R
Sbjct: 1657 NSFGL-GDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVR 1715
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E CQ+ ++ + N TVEV +G + K+ A+K+A++ L
Sbjct: 1716 ELQERCQQQAEGLEYKASRAGN---IATVEVFVDGVQIGVAQ-NPQKKMAQKLAARNALV 1771
Query: 844 SLK 846
LK
Sbjct: 1772 VLK 1774
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
++++Y KP + + C L LP N P + + +I+ +Q CL ACKKLH+
Sbjct: 840 FIMQKYEKPGGSVEYS-----CKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHE 894
Query: 85 IGALTDNLLPDVVVEEHDAQKHGNE----PYDAEHPIYFPPELVN--------------Q 126
+GA TD LLPD E + + +E P A H ++P + + Q
Sbjct: 895 MGAFTDTLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQ 954
Query: 127 CPQDTKI---TYHCYLIELKQN-FNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT 182
Q K+ + +C + ++ F + I+ EL++E+ DL V R +T
Sbjct: 955 NSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFG--NELDAEVLSTTMDLFVARTMIT 1012
Query: 183 -VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G+I++T +++L + F + L +++D ++D
Sbjct: 1013 KASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVD 1049
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 725 FDLAKTVLAYIQSRGRARKPGSDYILMLER 754
>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1688
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 266/886 (30%), Positives = 422/886 (47%), Gaps = 99/886 (11%)
Query: 32 YFKPTPKFDIN--KEMG--ICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQI 85
+F+P P+F E G IC + LP N PI + + + + K+ ACL+A +LH +
Sbjct: 658 FFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNL 717
Query: 86 GALTDNLLPDVVVEEHDA-----------QKHG---NEPYDAEHPIYFPPELVNQCPQDT 131
G L D LLPD E D + G + Y+ P+ F + P +
Sbjct: 718 GVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGDLYEMRVPVLFKQKWD---PSTS 774
Query: 132 KITYHCYLIELKQNFNYDIPAHDIV----LAVRTELESEIKKVNFDLEVDRGR-LTVNLK 186
+ H Y I + PA I +++ L E + ++ DL + R ++V +
Sbjct: 775 CVNLHSYYIMFVPH-----PADRIYKKFGFFMKSPLPVEAETMDIDLHLAHQRSVSVKIF 829
Query: 187 HLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID----YLLLP- 241
G + D++ L FQ +V+ + +L L L+D+ YLLLP
Sbjct: 830 PSGVTEFDNDEIRLAELFQEIALKVLFERG--ELIPDFVPLELQDSSRTSKSTFYLLLPL 887
Query: 242 -----ASEQSIDWEPVAS-LSFPCDIGLKHHKNCSTM------SNARVVQTKSGPLCTCM 289
S S+DW + + LS P K S + + ++ +G
Sbjct: 888 CLHDGESVISVDWVTIRNCLSSPI------FKTPSVLVEDIFPPSGSHLKLANGCWNIDD 941
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYE---ERYGIQLCFDQE 346
+ NS+V T +S Q Y++ + N S + + K H E + YG++L +
Sbjct: 942 VKNSLVFTTYSKQFYFVADICHGRNGFSPVKES-----STKSHVESIYKLYGVELKHPAQ 996
Query: 347 LLLNGRRIFHAQNYLSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVP 403
LL + + H +N L R + EP ++ E+PPEL + + +S S + +P
Sbjct: 997 PLLRVKPLCHVRNLLHN-RMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLP 1055
Query: 404 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFL 463
SIMHR+++LL+A+ LK++L + + +VLEA+TT+KC E LE LE LGD+FL
Sbjct: 1056 SIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFL 1115
Query: 464 KYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG 523
K+A S+ LF + + EG L+ ++ +++N+ LC+L L +IR + DP + G
Sbjct: 1116 KFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFG 1175
Query: 524 -------DNSGSYELNDHSLFNERKIYVTGRKKVK---------SKTVADVVEALIGAFL 567
D S E+ HSL + I + +++ KT+ADVVEAL+GAFL
Sbjct: 1176 HPCRVTCDEVASKEV--HSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFL 1233
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYE------RQFQVQAERLVNVRHLESLLNYSFRDP 621
G + FL IG+ VDF ++ + R++ R N+ LE+ L+Y F
Sbjct: 1234 VDSGFKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTR-NNLETLENQLDYKFLHK 1292
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
LLV+A H SY CYQRLEFLGDAVLDYL+T Y + +P L PG LTD+RS SV
Sbjct: 1293 GLLVQAFIHPSYN-RHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSV 1351
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDI 741
NN+ A +V L + + S L++ I + L S G PK LGD+
Sbjct: 1352 NNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLAS--GQSEGPRCPKVLGDL 1409
Query: 742 IESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVA 801
+ES GA+F+D G N V+ + L+P+ +++ P +EL E CQ + + ++ A
Sbjct: 1410 VESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWD-REISA 1468
Query: 802 PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+ +G V ++V NG + +K K A++ ++ +LKA
Sbjct: 1469 TKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKA 1514
>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1693
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 264/875 (30%), Positives = 416/875 (47%), Gaps = 78/875 (8%)
Query: 32 YFKPTPKFDIN--KEMG--ICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQI 85
+F+P P+F E G IC + LP N PI +++ + + K+ ACL+A +LH +
Sbjct: 665 FFQPKPEFQFKPVNEFGGTICRITLPANAPISEIVSSLLPSTEAAKKDACLKAVYELHNL 724
Query: 86 GALTDNLLPDVVVEEHDAQKHGNEPYD-------AEHPIY--FPPELVNQCPQDTK--IT 134
G L D LLPD E D +D + +Y P L Q ++ +
Sbjct: 725 GVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGELYEMVVPVLFKQKWDSSRSCVN 784
Query: 135 YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQL 193
H Y I + D +++ L E ++ DL + R ++V + G +
Sbjct: 785 LHSYYIRFVPH-PADRSYKKFGFFMKSPLPIEADTMDIDLHLAHQRSVSVKIFPSGVTEF 843
Query: 194 TPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID----YLLLPASEQ---- 245
D++ L FQ +V+ + +L L L+D+ YLLLP S
Sbjct: 844 DNDEIRLAELFQEVALKVLFERG--ELIPEFVPLELQDSSRTSKSTFYLLLPISLHDAES 901
Query: 246 --SIDWEPVAS-LSFPCDIGLKHHKNCSTMSNARVVQTKS------GPLCTCMIYNSVVC 296
S+DW + S LS P K S + V T S G + NS+V
Sbjct: 902 VISVDWVTIRSCLSSPI------FKTPSVLVEDIVPPTGSYLNLANGCWNIDDVKNSLVF 955
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFH 356
H+ Q Y++ + N + ++ ++ + YG++L + + LL + + H
Sbjct: 956 MTHNKQFYFVADIC--YGRNGFSPVKESSTKSHMENIYKLYGVELKYPGQPLLRVKPLCH 1013
Query: 357 AQNYLSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
+N L R +K EP ++ E+PPEL ++ + +S S + +PSIMHR+++LL
Sbjct: 1014 VRNLLHN-RMQKNLEPQELDEYFIEIPPELSQLKIKGLSKEIGSSLSLLPSIMHRVENLL 1072
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
+A+ LK+++ + + +VLEA+TT+KC E LE LE LGD+FLK+A S+ LF
Sbjct: 1073 VAIELKHVMSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFL 1132
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------DNS 526
+ EG L+ ++ + ++N+ LC+L L +IR + DP + G D
Sbjct: 1133 HHDRLDEGELTRRRSKAVNNSNLCRLAIKRNLQVYIRDQALDPTQFFAFGHPCRVTCDEV 1192
Query: 527 GSYELNDHSL--------FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 578
S E+ HSL N G + KT+ADVVEAL+GAFL G + F
Sbjct: 1193 TSEEV--HSLNRVPGLLESNSEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKF 1250
Query: 579 LDRIGIKVDFVNVPYE------RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS 632
L IG+ VDF ++ + R++ R N+ LE+ L+Y+F LLV+A H S
Sbjct: 1251 LSWIGVNVDFESLQVQDACIASRRYMPLTTR-NNLEALENQLDYNFLHKGLLVQAFIHPS 1309
Query: 633 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVK 692
Y CYQRLEFLGDAVLDYL+T Y + +P L PG LTD+RS SVNN A +V
Sbjct: 1310 YN-RHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNKALANVAVS 1368
Query: 693 HGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVD 752
L + + S L++ I + L S G PK LGD++ES GA+F+D
Sbjct: 1369 FSLKRFLFCESVYLHEAIEDYTNFRAASPLAS--GPSEGPRCPKVLGDLVESCLGALFLD 1426
Query: 753 SGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTV 812
G N V+ + L+P+ +++ P +EL E CQ + + ++ A + +G +V +
Sbjct: 1427 CGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWD-REISATKKDGGFSVEL 1485
Query: 813 EVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+V G + +K + K A++ ++ SLKA
Sbjct: 1486 KVTKKGCCLTVSATGRNKRESTKKAAQLMITSLKA 1520
>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1702
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 266/886 (30%), Positives = 422/886 (47%), Gaps = 99/886 (11%)
Query: 32 YFKPTPKFDIN--KEMG--ICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQI 85
+F+P P+F E G IC + LP N PI + + + + K+ ACL+A +LH +
Sbjct: 672 FFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNL 731
Query: 86 GALTDNLLPDVVVEEHDA-----------QKHG---NEPYDAEHPIYFPPELVNQCPQDT 131
G L D LLPD E D + G + Y+ P+ F + P +
Sbjct: 732 GVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGDLYEMRVPVLFKQKWD---PSTS 788
Query: 132 KITYHCYLIELKQNFNYDIPAHDIV----LAVRTELESEIKKVNFDLEVDRGR-LTVNLK 186
+ H Y I + PA I +++ L E + ++ DL + R ++V +
Sbjct: 789 CVNLHSYYIMFVPH-----PADRIYKKFGFFMKSPLPVEAETMDIDLHLAHQRSVSVKIF 843
Query: 187 HLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID----YLLLP- 241
G + D++ L FQ +V+ + +L L L+D+ YLLLP
Sbjct: 844 PSGVTEFDNDEIRLAELFQEIALKVLFERG--ELIPDFVPLELQDSSRTSKSTFYLLLPL 901
Query: 242 -----ASEQSIDWEPVAS-LSFPCDIGLKHHKNCSTM------SNARVVQTKSGPLCTCM 289
S S+DW + + LS P K S + + ++ +G
Sbjct: 902 CLHDGESVISVDWVTIRNCLSSPI------FKTPSVLVEDIFPPSGSHLKLANGCWNIDD 955
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYE---ERYGIQLCFDQE 346
+ NS+V T +S Q Y++ + N S + + K H E + YG++L +
Sbjct: 956 VKNSLVFTTYSKQFYFVADICHGRNGFSPVKES-----STKSHVESIYKLYGVELKHPAQ 1010
Query: 347 LLLNGRRIFHAQNYLSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVP 403
LL + + H +N L R + EP ++ E+PPEL + + +S S + +P
Sbjct: 1011 PLLRVKPLCHVRNLLHN-RMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLP 1069
Query: 404 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFL 463
SIMHR+++LL+A+ LK++L + + +VLEA+TT+KC E LE LE LGD+FL
Sbjct: 1070 SIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFL 1129
Query: 464 KYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG 523
K+A S+ LF + + EG L+ ++ +++N+ LC+L L +IR + DP + G
Sbjct: 1130 KFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFG 1189
Query: 524 -------DNSGSYELNDHSLFNERKIYVTGRKKVK---------SKTVADVVEALIGAFL 567
D S E+ HSL + I + +++ KT+ADVVEAL+GAFL
Sbjct: 1190 HPCRVTCDEVASKEV--HSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFL 1247
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYE------RQFQVQAERLVNVRHLESLLNYSFRDP 621
G + FL IG+ VDF ++ + R++ R N+ LE+ L+Y F
Sbjct: 1248 VDSGFKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTR-NNLETLENQLDYKFLHK 1306
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
LLV+A H SY CYQRLEFLGDAVLDYL+T Y + +P L PG LTD+RS SV
Sbjct: 1307 GLLVQAFIHPSYN-RHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSV 1365
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDI 741
NN+ A +V L + + S L++ I + L S G PK LGD+
Sbjct: 1366 NNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLAS--GQSEGPRCPKVLGDL 1423
Query: 742 IESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVA 801
+ES GA+F+D G N V+ + L+P+ +++ P +EL E CQ + + ++ A
Sbjct: 1424 VESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWD-REISA 1482
Query: 802 PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+ +G V ++V NG + +K K A++ ++ +LKA
Sbjct: 1483 TKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKA 1528
>gi|357465903|ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1758
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 272/946 (28%), Positives = 429/946 (45%), Gaps = 147/946 (15%)
Query: 31 RYFKPTPKF-DINKEMG--ICTLYLPNNCPIQTVIAQG--NIKTLKQTACLEACKKLHQI 85
+Y P F + E G +C L LP N QT++ +++ K CLEACKKLHQ+
Sbjct: 631 KYSSAKPNFVSLPMEGGGHVCKLILPPNAAFQTLVGPSGKDVRQAKTLVCLEACKKLHQM 690
Query: 86 GALTDNLLP--------DVVVE--EHDAQKHGNEPYDAEHPIYFPPELVNQC------PQ 129
GAL D+L+P D +++ E A ++ + C P
Sbjct: 691 GALNDHLVPFVEDPLEADNIIKNKESSAAAAAGAGTTKRKELHGTASVRALCGSWGDKPD 750
Query: 130 DTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLG 189
K +H Y E K N +I + VL V ++L+ ++ + DL + + ++ G
Sbjct: 751 GAK--FHAYKFEFKCNIVSEIYS-GFVLLVESKLDDDVGNIELDLYLISKMVKTSVISCG 807
Query: 190 KIQLTPDKVLLCRRFQIALFRVIMDHNLDK-----------LNEILKGLWLRDNLEIDYL 238
++ L ++V + F F + + K L + + LW N YL
Sbjct: 808 QVDLDAEQVTKAKGFHELFFNGLFGRLIRKSTTVQGEREFLLQKDSELLWSPKN---SYL 864
Query: 239 LLPASEQS--------IDWEPVAS-------------------------LSFPCDIGLKH 265
LLP + + I W + S +S PCD
Sbjct: 865 LLPLEKSNDICIRSLQIHWSAINSCASAIEFVRQRFSLVTEVSDDNSKIISPPCDTDNSK 924
Query: 266 --HKNCSTMSNARVVQ----TKSGPLCTC----------------MIYNSVVCTPHSGQI 303
C T N +++ T+S C + ++V H+G++
Sbjct: 925 IISPPCDT-DNRKIISPPCDTRSSSDMECESTNMFHFANCVVDVSSVKDNVALAIHTGKV 983
Query: 304 YYITGVLGHLNANSLFTRND--GGA---ITYKKHYEERYGIQLCFDQELLLNGRRIFHAQ 358
Y I V+ + +A S F N GA +T+ +++++RYGI L ++ LL ++ +A
Sbjct: 984 YCIIDVVDNSSAESPFDGNSDKSGAEDKMTFTQYFQKRYGITLRHPEQPLLRLKQGHNAH 1043
Query: 359 NYLSKCRQEKQREPSK----------ISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
N +E + S + +P EL + + + + S +PS+M+R
Sbjct: 1044 NLFLNLPEEDGGDKSSQVGPVAPKVPVHVHIPSEL--LCLLDVKRDVYKSMYLLPSLMYR 1101
Query: 409 LQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAAS 468
++SL+L+ L+ + H N IP+S VLEA+TT +C E F +E LE LGDS LKYA S
Sbjct: 1102 IESLMLSSQLRAEINGH-TDNFKIPSSLVLEALTTLRCCEKFSMERLELLGDSVLKYAVS 1160
Query: 469 QQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGD---- 524
L+ Y HEG LS + + N+ L KLG DH L G+IR F+P+ W+ PG
Sbjct: 1161 CHLYLKYPKKHEGHLSSLRQWAVRNSTLHKLGTDHNLQGYIRDSAFEPRRWIAPGQDCIH 1220
Query: 525 ----NSGSYELN---DHSLFNERKIYVTGR------KKVKSKTVADVVEALIGAFLSTGG 571
+ G L D E V G+ + + SKT+AD VEALIGA+ GG
Sbjct: 1221 TVPCDCGLETLEVPLDVKFHTEDPKVVVGKLCDRGHRWMCSKTIADCVEALIGAYYVGGG 1280
Query: 572 ENVGLIFLDRIGIKVDFVNVPYERQFQVQA-----ERLVNVRHLESLLNYSFRDPSLLVE 626
L + +GI ++ + ++ + LE+ + Y F LLVE
Sbjct: 1281 LIASLHMMKWLGIDSGLEPSMVDKAITAASLHTYTPKVNEIASLEAKIGYEFSVKGLLVE 1340
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
A TH S CY+RLEFLGD+VLD LIT +L+ + + PG+LTD+RSASVNN+ +
Sbjct: 1341 ATTHLSESEHGTGCCYERLEFLGDSVLDLLITWHLFQSHTEIDPGELTDLRSASVNNENF 1400
Query: 687 ALSSVKHGLHKHILHASQELYKWI-----NITVDSFERLSLESTFGWESETSFPKALGDI 741
A ++V+ LH+H+LH+S L I I+ + L+ PKALGD+
Sbjct: 1401 AQAAVRRNLHQHLLHSSGLLQSQILEYAKVISEPEDNAVPLQG-------IKAPKALGDL 1453
Query: 742 IESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVA 801
+ES++GAI +D+ + + V++ PLL P++TPE + L P REL + + +K V+
Sbjct: 1454 VESIAGAILIDTKLDLDQVWKVFNPLLSPIVTPEKLELPPLRELMQLSDSLGYFVKVKVS 1513
Query: 802 PRINGKAA-VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
G V + V +K++AK A+ ++LK L+
Sbjct: 1514 HDKKGTMEHVEIRVQLPNERLVREGKGPNKKSAKGDAAFQLLKDLE 1559
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS+IQSRGR+R NS ++LML+R
Sbjct: 530 FDLPTTVCSYIQSRGRSRRANSQFILMLER 559
>gi|449528774|ref|XP_004171378.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 453
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/341 (48%), Positives = 229/341 (67%), Gaps = 8/341 (2%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKPTP++D KE CTL+LP + P+QT ++ + K KQ+ACLEACK+LH GALTDN
Sbjct: 85 YFKPTPRWD--KET--CTLHLPKSSPLQTFSSKDDAKYSKQSACLEACKQLHTCGALTDN 140
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+P +V EE AQ+ N+P D E PIY PPE V+ CP ++ + YHCYLIELKQNF+YDI
Sbjct: 141 LVPQIVAEESVAQE-WNKPLDDEQPIYVPPEFVHCCPHNSSVVYHCYLIELKQNFHYDIS 199
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
AH+IVLA+RTELE E++ + DL+VDRG VN K++G I+L+P++VLL R+FQ +FRV
Sbjct: 200 AHNIVLAMRTELEFEVQSMCHDLDVDRGSFDVNFKYVGIIKLSPEQVLLSRQFQRTIFRV 259
Query: 212 IMDHNL-DKLNEILKGLWLRDNLEIDYLLLPAS-EQSIDWEPVASLSFPCDIGLKHHKNC 269
+++H DKL+E + L D +DYLLLP++ + I WE V S+ H
Sbjct: 260 LLNHTWTDKLSEN-NEICLGDGPRVDYLLLPSTGGELISWEIVLSVLVSSREYCVHRGIS 318
Query: 270 STMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITY 329
S+ + V TKSG +C C + NSVV TPH+ +Y IT VL LN NSL + Y
Sbjct: 319 SSKDVSYDVPTKSGLVCICRLQNSVVYTPHNDHVYCITSVLSELNGNSLLKIRKNEMMAY 378
Query: 330 KKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQR 370
K++Y+ R+GI L F+++ LL G++IF NY+ + R+ K++
Sbjct: 379 KEYYKVRHGIDLRFEKQPLLRGKKIFPVHNYIKRFRKHKEQ 419
>gi|148907962|gb|ABR17101.1| unknown [Picea sitchensis]
Length = 685
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/467 (40%), Positives = 266/467 (56%), Gaps = 26/467 (5%)
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLK 464
+MHRL++LL+A+ LK +L + + S+VLEAITT++C EGF LE LE LGD+FLK
Sbjct: 1 MMHRLENLLVAIELKELLTASFPEGSLVTASRVLEAITTERCMEGFSLERLEVLGDAFLK 60
Query: 465 YAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMI--- 521
YA S++LF Y EG L+ K+ I N+ L K P +IR E FDPK +
Sbjct: 61 YAVSRRLFLVYDKLDEGQLTKKRSNAIKNSNLYKRAKGKGFPAYIRDEYFDPKQYFALGR 120
Query: 522 PGDNSGSYEL--------NDHSLFNERKIYVTGRKK---VKSKTVADVVEALIGAFLSTG 570
P N + EL D+++ + V K+ + KT+ADVVEALIGA+L
Sbjct: 121 PCKNVCTPELVHMIHYFEGDNTMTDTDFTSVKCTKRHHWLHMKTIADVVEALIGAYLVDS 180
Query: 571 GENVGLIFLDRIGIKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLV 625
G L FL IGI++DF V + + + +++ LE LL Y+F LL+
Sbjct: 181 GFGAALAFLKWIGIEIDFDTSLVGEVCIRSRNNLSLIKCIDIDELERLLGYNFSYKGLLL 240
Query: 626 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
EA H S+ CYQRLEFLGDAVLDY+IT YLY+ YP + PG LTDMRS +VNN+
Sbjct: 241 EAFAHPSFN-EHNGGCYQRLEFLGDAVLDYIITSYLYSVYPDMKPGYLTDMRSMTVNNES 299
Query: 686 YALSSVKHGLHKHILHASQELYKWINITVDSFERL-SLESTFGWESETSFPKALGDIIES 744
+A +V+HGL+ +++ S L + VD + L + + E E PK LGDI+ES
Sbjct: 300 FACVAVRHGLYMYLIQKSDSLSSAVTKYVDFMKALFTADRDSCDEPEPKCPKVLGDIVES 359
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRI 804
+GA+ +D+G + + V++ + +L+P++TPET+ LQP REL+E CQ H+ ++ A +
Sbjct: 360 FAGALVIDTGFDLDCVWKLMLNILQPIVTPETLCLQPVRELSEVCQHHNLTLDYVKASKG 419
Query: 805 NGKAAVTVEVHANGTLFKHTHADADKET----AKKVASKEVLKSLKA 847
NG + VE +G + T AKKVASK+ L LK
Sbjct: 420 NGNGYL-VEAKVSGKKVSGSVGGTGTRTSIKDAKKVASKDALLKLKG 465
>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
Length = 1730
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 205/606 (33%), Positives = 311/606 (51%), Gaps = 86/606 (14%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
+V HSG+ +Y+ V+ + A S F R +G G++ +Y +YE++YG++L + +
Sbjct: 1030 LVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVEYSSYADYYEQKYGVRLHCRHQPM 1089
Query: 349 LNGRRIFHAQNYLSKCRQ--EKQREPSKISF--ELPPELCRIIMGPMSLSTFYSFTFVPS 404
L R + H +N LS + E E S ++ LPPE+C ++ P+ +PS
Sbjct: 1090 LRCRGVSHCKNLLSPRFKLLESSEELSDKTYYVMLPPEIC--LVHPLPGCLVRGAQRLPS 1147
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLK 464
+M R++S+LLAV LK+ + IP +KVLEA+T CQE F E E LGD++LK
Sbjct: 1148 VMKRVESILLAVQLKHEI------GFPIPAAKVLEALTAASCQETFSYERAELLGDAYLK 1201
Query: 465 YAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG- 523
+ S++LF + HEG L+ + + +SN L + L +I+++ F P W PG
Sbjct: 1202 WVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSYIQSDRFAPSRWAAPGV 1261
Query: 524 -------------DNSGSYELNDHSLFNERKIYVTGRKKV-------------------- 550
DN + E+ S ER +G ++V
Sbjct: 1262 PPVFDEDLKDSNLDNEAA-EVPKASEHEERSTKSSGEEEVLDDSTSLEDGEAEWDSSSYR 1320
Query: 551 --KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL---- 604
SKT+ADVVEALIG + GG F++ I I +D+ + + A R
Sbjct: 1321 VLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWISIPIDY------DEAEANAARAGCSV 1374
Query: 605 -------VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 657
++ LE + Y F+ S+LVEA++H S +P CYQRLEF+GDAVLD+LI
Sbjct: 1375 PDSVMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVP-CYQRLEFVGDAVLDHLI 1433
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
T YL+ +Y L PG LTD+R+A+VNN+ +A SVKH H H+ H S L I V
Sbjct: 1434 TRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGSSALEAQIKDFVKDI 1493
Query: 718 ERLSLE----STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
+ L+ ++FG + PK LGDI+ES++GAIF+D+G + V++ LLEPM+T
Sbjct: 1494 QS-ELDKPGINSFGI-GDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFERLLEPMVT 1551
Query: 774 PETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETA 833
P+T+ + P REL E CQ+ ++ + + TVEV +G + T
Sbjct: 1552 PDTLPVHPVRELQERCQQQAEGLEYRAS---REGSIATVEVFVDG-----VQIGCAQNTQ 1603
Query: 834 KKVASK 839
KK+A K
Sbjct: 1604 KKMAQK 1609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP+N P+++ +K +Q CLEACKKLH++ A TD LLPD + +
Sbjct: 711 CKLRLPSNAPVESFDGPVCSTMKGAQQAVCLEACKKLHEMAAFTDMLLPDTGTSDKSDKG 770
Query: 106 HGNE-----PYDAEHPIYFPPELVNQCPQD--------TKITYHCYLIELKQ-NFNYD-- 149
NE P A + YFP + + D + + Y+I F+ D
Sbjct: 771 EDNETTDPIPGTARYREYFPEGIADFLKGDWILNTNYLLSTSLYMYIIHYSNIGFSTDPL 830
Query: 150 -IPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCRRFQIA 207
D + E++ E+ + DL V R T +L G +T ++ L + F +
Sbjct: 831 VTQTSDFAVLFGREMDPEVLTASVDLFVARTLTTQASLVFSGVHHITSSELTLLKAFHVR 890
Query: 208 LFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASE---QSIDW 249
L +++D ++ E W + YL +P + + IDW
Sbjct: 891 LMSIVLDVDV----EPASTPWDSNKA---YLFVPLTSSCTKQIDW 928
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML++
Sbjct: 581 FDLAKTVLAYIQSRGRARKPGSDYILMLEK 610
>gi|222619725|gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japonica Group]
Length = 1839
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 261/897 (29%), Positives = 412/897 (45%), Gaps = 119/897 (13%)
Query: 34 KPTPKFDINKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGALTDN 91
KPT +F + + +CTL LP + +Q ++ N+ KQ CL+ACKKLH++GAL D+
Sbjct: 553 KPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDH 612
Query: 92 L-------LPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQ 144
L +P++V + + + N + T + Y K
Sbjct: 613 LCLSVEDPVPEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY----KM 668
Query: 145 NFNYDIPAH---DIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLC 201
NF D + VL + L E+ + DL + + ++ G ++L ++
Sbjct: 669 NFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQA 728
Query: 202 RRFQIALFRVIMDHNLDK-----------LNEILKGLWLRDNLEIDYLLLPA-----SEQ 245
+ FQ LF + + LN+ +W N YLLLP S
Sbjct: 729 KLFQGLLFNGLFGKLFTRSKVPNAPREFILNKEDTFVW---NTASVYLLLPTNPSFDSNV 785
Query: 246 SIDWEPVASLSFPCDIGLKHHKNC---------STMSNARVVQTKSGPLCTCMIYNSVVC 296
I+W + + + + + + S + ++ + + + VV
Sbjct: 786 CINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVL 845
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGA-------ITYKKHYEERYGIQLCFDQELLL 349
H+G+IY + L+ +S F DG + T+ ++++++YGI L + LL
Sbjct: 846 AVHTGKIYTALDIT-ELSGDSAF---DGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLL 901
Query: 350 NGRRIFHAQNYLSKCRQEKQREPSKIS------------FELPPELCRIIMGPMSLSTFY 397
+ + N LS +++ +S +PPEL +I + +
Sbjct: 902 VLKPSHNPHNLLSSKFRDEGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILR 959
Query: 398 SFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLET 457
SF P++M+R++SL LA L++ + + I + +LEAITT +C E F +E LE
Sbjct: 960 SFYLFPALMYRIESLTLASQLRSEI---GYSDSNISSFLILEAITTLRCSEDFSMERLEL 1016
Query: 458 LGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPK 517
LGDS LKYA EG LS + +I NA L KLG + + G++R FDP+
Sbjct: 1017 LGDSVLKYA------------DEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPR 1064
Query: 518 MWMIPGDNS-----------GSYELNDHSLFNERKIYV-----TGRKKVKSKTVADVVEA 561
W+ PG S +D + +++ I + G + + SKT+AD VEA
Sbjct: 1065 RWLAPGQLSIRPSPCECPVKSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCVEA 1124
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR----------HLE 611
+IGA+ + GG + L +GI + E VQA +V+ LE
Sbjct: 1125 IIGAYYAGGGLRAAMAVLKWLGIGAEI-----EEDLIVQAILSASVQTYLPKDNVFEMLE 1179
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ L YSF LLVEALTH S CY+RLEFLGDAVLD L+T YL+N + + G
Sbjct: 1180 AKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEG 1239
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST-FGWES 730
+LTD+RSASVNN+ +A +VKH H + H+S L I V+ E S++ +
Sbjct: 1240 ELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDG 1299
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQ 790
PK LGDI+ES++GAI +D+ + +VV+ PLL P++TPE + L P REL E+C
Sbjct: 1300 LPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCG 1359
Query: 791 KHHFSMKKTVAPRINGKAAV-TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
KH + + + R G V T++V L ++ AK AS +LK L+
Sbjct: 1360 KHGYFV--GINCRDQGDTVVATLDVQLKEVLLVRQGFSKKRKDAKAHASSLLLKDLE 1414
>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
Length = 1728
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 312/608 (51%), Gaps = 90/608 (14%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
+V HSG+ +Y+ V+ + A S F R +G G++ +Y +YE++YG++L + +
Sbjct: 1030 LVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVEYSSYADYYEQKYGVRLHCRHQPM 1089
Query: 349 LNGRRIFHAQNYLSKCRQ--EKQREPSKISF--ELPPELCRIIMGPMSLSTFYSFTFVPS 404
L R + H +N LS + E E S ++ LPPE+C ++ P+ +PS
Sbjct: 1090 LRCRGVSHCKNLLSPRFKLLESSEELSDKTYYVMLPPEIC--LVHPLPGCLVRGAQRLPS 1147
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLK 464
+M R++S+LLAV LK+ + IP +KVLEA+T CQE F E E LGD++LK
Sbjct: 1148 VMKRVESILLAVQLKHEI------GFPIPAAKVLEALTAASCQETFSYERAELLGDAYLK 1201
Query: 465 YAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG- 523
+ S++LF + HEG L+ + + +SN L + L +I+++ F P W PG
Sbjct: 1202 WVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSYIQSDRFAPSRWAAPGV 1261
Query: 524 -------------DNSGSY--ELNDHSLFNERKIYVTGRKKV------------------ 550
DN + + N+H ER +G ++V
Sbjct: 1262 PPVFDEDLKDANLDNEAAEVPKANEH---EERSTKSSGEEEVLDDSTSLEDGEAEWDSSS 1318
Query: 551 ----KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL-- 604
SKT+ADVVEALIG + GG F++ I I +D+ + + A R
Sbjct: 1319 YRVLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWINIPIDY------DEAEANAARAGC 1372
Query: 605 ---------VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 655
++ LE + Y F+ S+LVEA++H S +P CYQRLEF+GDAVLD+
Sbjct: 1373 SVPDSVMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVP-CYQRLEFVGDAVLDH 1431
Query: 656 LITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVD 715
LIT YL+ +Y L PG LTD+R+A+VNN+ +A SVKH H H+ H S L I V
Sbjct: 1432 LITRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGSSALEAQIKDFVK 1491
Query: 716 SFERLSLE----STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
+ L+ ++FG + PK LGDI+ES++GAIF+D+G + V++ LLEPM
Sbjct: 1492 DIQS-ELDKPGINSFGI-GDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFERLLEPM 1549
Query: 772 ITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKE 831
+TP+T+ + P REL E CQ+ ++ + + TVEV +G +
Sbjct: 1550 VTPDTLPVHPVRELQERCQQQAEGLEYRAS---REGSIATVEVFVDG-----VQIGCAQN 1601
Query: 832 TAKKVASK 839
T KK+A K
Sbjct: 1602 TQKKMAQK 1609
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP+N P+++ +K +Q CLEACKKLH++ A TD LLPD + +
Sbjct: 711 CKLRLPSNAPVESFDGPVCSTMKGAQQAVCLEACKKLHEMAAFTDMLLPDTGTPDKSDKG 770
Query: 106 HGNE-----PYDAEHPIYFPPELVNQCPQD--------TKITYHCYLIELKQ-NFNYD-- 149
NE P A + YFP + + D + + Y+I+ F+ D
Sbjct: 771 EDNETTDPIPGTARYREYFPEGIADFLKGDWILNTNYLLSTSLYMYIIQYSNVGFSTDPL 830
Query: 150 -IPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCRRFQIA 207
D + E++ E+ + DL V R T +L G +T ++ L + F +
Sbjct: 831 VTQTSDFAVLFGREMDPEVLTASVDLFVARTLTTQASLVFSGVHHITSSELTLLKAFHVR 890
Query: 208 LFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASE---QSIDW 249
L +++D ++ E W + YL +P + + IDW
Sbjct: 891 LMSIVLDVDV----EPASTPWDSNKA---YLFVPLTSSCTKQIDW 928
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML++
Sbjct: 581 FDLAKTVLAYIQSRGRARKPGSDYILMLEK 610
>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 235/741 (31%), Positives = 368/741 (49%), Gaps = 79/741 (10%)
Query: 32 YFKPTPKF-DINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F I+ GI C L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 563 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 622
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 623 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 679
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
Y+ I + ++ Y + L V L E + + DL + RGR+ +KHLGK
Sbjct: 680 LHFYYVKFIPIPEDRRYQM----FGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGK 735
Query: 191 IQLTPDK------VLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLP 241
I +K ++L +FQ ++++D + + G + LEI+ YLLLP
Sbjct: 736 IAFEKEKASSCSSMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDV--TLEINSTFYLLLP 793
Query: 242 ASEQS------IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIY 291
++ IDW V +S F I + H + S+ + R++ G +
Sbjct: 794 IKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLD---GIFSKTDVV 850
Query: 292 NSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNG 351
SVV +PH+ +++ G+L +NA S + TY +H++ER+ I+L ++ LL
Sbjct: 851 GSVVFSPHNNIFFFVDGILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKA 905
Query: 352 RRIFHAQNYL----SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMH 407
++IF+ +N L + + + RE + ELPPELC + + S S + +PS+M+
Sbjct: 906 KQIFNLRNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMY 965
Query: 408 RLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
RL++LL+A+ LK+++L + I S +LEA+TT+KC E LE E LGD+FLKY
Sbjct: 966 RLENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVV 1025
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
+ F TY+ EG L+ ++ +++N+ L +L KL +IR + F+P + PG
Sbjct: 1026 GRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCK 1085
Query: 528 SYELNDHSL-FNERKIYVTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVG 575
D + ++ I+ R+ + K +ADVVE+LIGAFL GG
Sbjct: 1086 VVCNTDVEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAA 1145
Query: 576 LIFLDRIGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTH 630
FL IGI VDF N R + L ++ LE L+ Y F+ LL++A H
Sbjct: 1146 FAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVH 1205
Query: 631 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSS 690
S+ CYQ+ EFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++
Sbjct: 1206 PSFS-QHSGGCYQKTEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAA 1264
Query: 691 VKHGLHKHILHASQELYKWIN 711
V+ +HKH++ S L I+
Sbjct: 1265 VEKSIHKHLIKDSNHLTSAIS 1285
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
L++ L E P C +RLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A
Sbjct: 1293 LSNSEKDLLEEPACPKRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLA 1352
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
++V+ +HKH++ S L I+ + + +LS S E + PKALGDI+ES G
Sbjct: 1353 YAAVEKSIHKHLIKDSNHLTSAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIG 1410
Query: 748 AIFVDSGCNKEVVFES 763
A+ +DSG N V+++
Sbjct: 1411 AVLLDSGFNLNYVWKN 1426
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+++L+R
Sbjct: 464 FDLPETVASFIQSRGRARMTKSKYVVLLER 493
>gi|334185719|ref|NP_001154663.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|332644323|gb|AEE77844.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1570
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 244/796 (30%), Positives = 386/796 (48%), Gaps = 108/796 (13%)
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
T+ Y + N + ++ + L + + L ++ KV DL + R + ++ G+I+L
Sbjct: 651 TFQAYKFDFCCNISGEVYS-SFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRL 709
Query: 194 TPDKVLLCRRFQIALFR------VIMDHNLDKLNEIL-----KGLWLRDNLEIDYLLLP- 241
+ ++++ + FQ F + + E L LW + +LLLP
Sbjct: 710 SQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLW---HPAFMFLLLPV 766
Query: 242 -----ASEQSIDWEPVASLSFPCDIGLKHH---------KNCSTMSNARVVQTKSGPLCT 287
AS +IDW + S + + K+ C+T S V+
Sbjct: 767 ETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETN 826
Query: 288 CMIYNS-----------VVCTPHSGQIYYITGVLGHLNANSLFTRN-DGGAITYKKHYEE 335
+ + + VV H+G+IY I + +A S F + G TY +++ +
Sbjct: 827 LIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNK 886
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQE------------KQREPSKISFELPPEL 383
+YGI L + L+ ++ HA N L +E ++R+P+ I LPPEL
Sbjct: 887 KYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPN-IHAHLPPEL 945
Query: 384 CRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITT 443
I P ++ S +PS+MHRL+SL+LA L+ + D + N +I ++ +LEA+TT
Sbjct: 946 LARIDVPRAV--LKSIYLLPSVMHRLESLMLASQLREEI-DCSIDNFSISSTSILEAVTT 1002
Query: 444 KKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDH 503
C E F +E LE LGDS LKY AS LF Y + EG LS ++ IISN+ L +L
Sbjct: 1003 LTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSR 1062
Query: 504 KLPGFIRTEPFDPKMWMIPGDNS----------GSYELN-DHSLFNERKIYVTGR----- 547
KL G+IR F+P+ W PG S + E+ D F E G+
Sbjct: 1063 KLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMG 1122
Query: 548 -KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
+ V SK+V+D EALIGA+ +GG + L + +GI VDF + V+A V+
Sbjct: 1123 HRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDF-----DPNLVVEAINRVS 1177
Query: 607 VR----------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 656
+R LE + + F LL EA+TH S L E Y+RLEFLGD+VLD+L
Sbjct: 1178 LRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSS--LRE-SYSYERLEFLGDSVLDFL 1234
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS 716
IT +L+N Y PG++TD+RSA VNN+ +A +VK+ LH H+ + L IN + S
Sbjct: 1235 ITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMS 1294
Query: 717 FER-----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
F++ S+ S G PKALGD++ES++GA+ +D+ + + V+ PLL P+
Sbjct: 1295 FQKPDETGRSIPSIQG-------PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPL 1347
Query: 772 ITPETMRLQPARELNEYCQKHHFSMKKTVAPRING-KAAVTVEVHANGTLFKHTHADADK 830
+TP+ ++L P RELNE C + + V +G KA T+++ + L ++
Sbjct: 1348 VTPDKLQLPPYRELNELCDSLGYFFR--VKCSNDGVKAQATIQLQLDDVLLTGDGSEQTN 1405
Query: 831 ETAKKVASKEVLKSLK 846
+ A A+ +L L+
Sbjct: 1406 KLALGKAASHLLTQLE 1421
>gi|334185717|ref|NP_001154662.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|322518661|sp|Q9LXW7.2|DCL3_ARATH RecName: Full=Endoribonuclease Dicer homolog 3; AltName:
Full=Dicer-like protein 3; Short=AtDCL3
gi|332644322|gb|AEE77843.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1580
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 244/796 (30%), Positives = 386/796 (48%), Gaps = 108/796 (13%)
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
T+ Y + N + ++ + L + + L ++ KV DL + R + ++ G+I+L
Sbjct: 661 TFQAYKFDFCCNISGEVYS-SFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRL 719
Query: 194 TPDKVLLCRRFQIALFR------VIMDHNLDKLNEIL-----KGLWLRDNLEIDYLLLP- 241
+ ++++ + FQ F + + E L LW + +LLLP
Sbjct: 720 SQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLW---HPAFMFLLLPV 776
Query: 242 -----ASEQSIDWEPVASLSFPCDIGLKHH---------KNCSTMSNARVVQTKSGPLCT 287
AS +IDW + S + + K+ C+T S V+
Sbjct: 777 ETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETN 836
Query: 288 CMIYNS-----------VVCTPHSGQIYYITGVLGHLNANSLFTRN-DGGAITYKKHYEE 335
+ + + VV H+G+IY I + +A S F + G TY +++ +
Sbjct: 837 LIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNK 896
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQE------------KQREPSKISFELPPEL 383
+YGI L + L+ ++ HA N L +E ++R+P+ I LPPEL
Sbjct: 897 KYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPN-IHAHLPPEL 955
Query: 384 CRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITT 443
I P ++ S +PS+MHRL+SL+LA L+ + D + N +I ++ +LEA+TT
Sbjct: 956 LARIDVPRAV--LKSIYLLPSVMHRLESLMLASQLREEI-DCSIDNFSISSTSILEAVTT 1012
Query: 444 KKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDH 503
C E F +E LE LGDS LKY AS LF Y + EG LS ++ IISN+ L +L
Sbjct: 1013 LTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSR 1072
Query: 504 KLPGFIRTEPFDPKMWMIPGDNS----------GSYELN-DHSLFNERKIYVTGR----- 547
KL G+IR F+P+ W PG S + E+ D F E G+
Sbjct: 1073 KLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMG 1132
Query: 548 -KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
+ V SK+V+D EALIGA+ +GG + L + +GI VDF + V+A V+
Sbjct: 1133 HRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDF-----DPNLVVEAINRVS 1187
Query: 607 VR----------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 656
+R LE + + F LL EA+TH S L E Y+RLEFLGD+VLD+L
Sbjct: 1188 LRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSS--LRE-SYSYERLEFLGDSVLDFL 1244
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS 716
IT +L+N Y PG++TD+RSA VNN+ +A +VK+ LH H+ + L IN + S
Sbjct: 1245 ITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMS 1304
Query: 717 FER-----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
F++ S+ S G PKALGD++ES++GA+ +D+ + + V+ PLL P+
Sbjct: 1305 FQKPDETGRSIPSIQG-------PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPL 1357
Query: 772 ITPETMRLQPARELNEYCQKHHFSMKKTVAPRING-KAAVTVEVHANGTLFKHTHADADK 830
+TP+ ++L P RELNE C + + V +G KA T+++ + L ++
Sbjct: 1358 VTPDKLQLPPYRELNELCDSLGYFFR--VKCSNDGVKAQATIQLQLDDVLLTGDGSEQTN 1415
Query: 831 ETAKKVASKEVLKSLK 846
+ A A+ +L L+
Sbjct: 1416 KLALGKAASHLLTQLE 1431
>gi|15229816|ref|NP_189978.1| protein dicer-like 3 [Arabidopsis thaliana]
gi|7594553|emb|CAB88120.1| putative protein [Arabidopsis thaliana]
gi|94450858|gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana]
gi|332644321|gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1531
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 244/796 (30%), Positives = 386/796 (48%), Gaps = 108/796 (13%)
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
T+ Y + N + ++ + L + + L ++ KV DL + R + ++ G+I+L
Sbjct: 612 TFQAYKFDFCCNISGEVYS-SFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRL 670
Query: 194 TPDKVLLCRRFQIALFR------VIMDHNLDKLNEIL-----KGLWLRDNLEIDYLLLP- 241
+ ++++ + FQ F + + E L LW + +LLLP
Sbjct: 671 SQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLW---HPAFMFLLLPV 727
Query: 242 -----ASEQSIDWEPVASLSFPCDIGLKHH---------KNCSTMSNARVVQTKSGPLCT 287
AS +IDW + S + + K+ C+T S V+
Sbjct: 728 ETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETN 787
Query: 288 CMIYNS-----------VVCTPHSGQIYYITGVLGHLNANSLFTRN-DGGAITYKKHYEE 335
+ + + VV H+G+IY I + +A S F + G TY +++ +
Sbjct: 788 LIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNK 847
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQE------------KQREPSKISFELPPEL 383
+YGI L + L+ ++ HA N L +E ++R+P+ I LPPEL
Sbjct: 848 KYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPN-IHAHLPPEL 906
Query: 384 CRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITT 443
I P ++ S +PS+MHRL+SL+LA L+ + D + N +I ++ +LEA+TT
Sbjct: 907 LARIDVPRAV--LKSIYLLPSVMHRLESLMLASQLREEI-DCSIDNFSISSTSILEAVTT 963
Query: 444 KKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDH 503
C E F +E LE LGDS LKY AS LF Y + EG LS ++ IISN+ L +L
Sbjct: 964 LTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSR 1023
Query: 504 KLPGFIRTEPFDPKMWMIPGDNS----------GSYELN-DHSLFNERKIYVTGR----- 547
KL G+IR F+P+ W PG S + E+ D F E G+
Sbjct: 1024 KLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMG 1083
Query: 548 -KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
+ V SK+V+D EALIGA+ +GG + L + +GI VDF + V+A V+
Sbjct: 1084 HRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDF-----DPNLVVEAINRVS 1138
Query: 607 VR----------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 656
+R LE + + F LL EA+TH S L E Y+RLEFLGD+VLD+L
Sbjct: 1139 LRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSS--LRE-SYSYERLEFLGDSVLDFL 1195
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS 716
IT +L+N Y PG++TD+RSA VNN+ +A +VK+ LH H+ + L IN + S
Sbjct: 1196 ITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMS 1255
Query: 717 FER-----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
F++ S+ S G PKALGD++ES++GA+ +D+ + + V+ PLL P+
Sbjct: 1256 FQKPDETGRSIPSIQG-------PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPL 1308
Query: 772 ITPETMRLQPARELNEYCQKHHFSMKKTVAPRING-KAAVTVEVHANGTLFKHTHADADK 830
+TP+ ++L P RELNE C + + V +G KA T+++ + L ++
Sbjct: 1309 VTPDKLQLPPYRELNELCDSLGYFFR--VKCSNDGVKAQATIQLQLDDVLLTGDGSEQTN 1366
Query: 831 ETAKKVASKEVLKSLK 846
+ A A+ +L L+
Sbjct: 1367 KLALGKAASHLLTQLE 1382
>gi|218189575|gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
Length = 1858
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 260/897 (28%), Positives = 411/897 (45%), Gaps = 119/897 (13%)
Query: 34 KPTPKFDINKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGALTDN 91
KPT +F + + +CTL LP + +Q ++ N+ KQ CL+ACKKLH++GAL D+
Sbjct: 553 KPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDH 612
Query: 92 L-------LPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQ 144
L +P++V + + + N + T + Y K
Sbjct: 613 LCLSVEDPVPEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY----KM 668
Query: 145 NFNYDIPAH---DIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLC 201
NF D + VL + L E+ + DL + + ++ G ++L ++
Sbjct: 669 NFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQA 728
Query: 202 RRFQIALFRVIMDHNLDK-----------LNEILKGLWLRDNLEIDYLLLPA-----SEQ 245
+ FQ LF + + LN+ +W N YLLLP S
Sbjct: 729 KLFQGLLFNGLFGKLFTRSKVPNAPREFILNKEDTFVW---NTASVYLLLPTNPSFDSNV 785
Query: 246 SIDWEPVASLSFPCDIGLKHHKNC---------STMSNARVVQTKSGPLCTCMIYNSVVC 296
I+W + + + + + + S + ++ + + + VV
Sbjct: 786 CINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVL 845
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGA-------ITYKKHYEERYGIQLCFDQELLL 349
H+G+IY + L+ +S F DG + T+ ++++++YGI L + LL
Sbjct: 846 AVHTGKIYTALDIT-ELSGDSAF---DGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLL 901
Query: 350 NGRRIFHAQNYLSKCRQEKQREPSKIS------------FELPPELCRIIMGPMSLSTFY 397
+ + N LS +++ +S +PPEL +I + +
Sbjct: 902 VLKPSHNPHNLLSSKFRDEGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILR 959
Query: 398 SFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLET 457
SF P++M+R++SL LA L++ + + I + +LEAITT +C E F +E LE
Sbjct: 960 SFYLFPALMYRIESLTLASQLRSEI---GYSDSNISSFLILEAITTLRCSEDFSMERLEL 1016
Query: 458 LGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPK 517
LGDS LKYA EG LS + +I NA L KLG + + G++R FDP+
Sbjct: 1017 LGDSVLKYA------------DEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPR 1064
Query: 518 MWMIPGDNS-----------GSYELNDHSLFNERKIYV-----TGRKKVKSKTVADVVEA 561
W+ PG S +D + +++ I + G + + SKT+AD EA
Sbjct: 1065 RWLAPGQLSIRPSPCECPVKSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCFEA 1124
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR----------HLE 611
+IGA+ + GG + L +GI + E VQA +V+ LE
Sbjct: 1125 IIGAYYAGGGLRAAMAVLKWLGIGAEI-----EEDLIVQAILSASVQTYLPKDNVFEMLE 1179
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ L YSF LLVEALTH S CY+RLEFLGDAVLD L+T YL+N + + G
Sbjct: 1180 AKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEG 1239
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST-FGWES 730
+LTD+RSASVNN+ +A +VKH H + H+S L I V+ E S++ +
Sbjct: 1240 ELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDG 1299
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQ 790
PK LGDI+ES++GAI +D+ + +VV+ PLL P++TPE + L P REL E+C
Sbjct: 1300 LPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCG 1359
Query: 791 KHHFSMKKTVAPRINGKAAV-TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
KH + + + R G V T++V L ++ AK AS +LK L+
Sbjct: 1360 KHGYFV--GINCRDQGDTVVATLDVQLKEVLLVRQGFSKKRKDAKAHASSLLLKDLE 1414
>gi|357129053|ref|XP_003566182.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1806
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 233/766 (30%), Positives = 374/766 (48%), Gaps = 77/766 (10%)
Query: 143 KQNFNYDIPAH---DIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVL 199
K NF+ D D VL + T +E+E ++ +L + + ++ G ++L ++
Sbjct: 900 KLNFSCDQVGQKYSDFVLLIDTTIENEAANLDINLYLHDKMVKASVSPCGLLELDVQQME 959
Query: 200 LCRRFQIALFRVIMDHNLDK-----------LNEILKGLWLRDNLEIDYLLLPASEQ--- 245
+ FQ +F + LN+ +W N+ YLLLP
Sbjct: 960 KAKLFQALIFNGLFGKLFTGSKSSNSPREFILNKDDSLIWNNANM---YLLLPMDPTLES 1016
Query: 246 ----SIDWEPVASLSFPCDIGLKHHKNCST---------MSNARVVQTKSGPLCTCMIYN 292
I+W + + + K H + ++ ++ + ++ N
Sbjct: 1017 HDSFCINWRLIDEAATAVGLMRKVHSDDKMNLLAILDIDQNDGDLIHLANTSCEAHVLRN 1076
Query: 293 SVVCTPHSGQIYYITGVLGHLNANSLFT----RNDGGAITYKKHYEERYGIQLCFDQELL 348
V H+G+IY V L++NS F + + G T+K+++E++YGI L + L
Sbjct: 1077 VAVLAVHTGKIYTSLHVT-DLSSNSTFDGVSDKKETGFKTFKEYFEKKYGIVLRHPSQPL 1135
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKIS--FELPPELCRIIMGPMS-LSTFYSFTFVPSI 405
L + + N LS +++ K++ +PPEL + P L FY F PS+
Sbjct: 1136 LVLKPSHNPHNLLSSKIRDEGPYVIKVNNRVHMPPELLIPLNLPEDILRAFYLF---PSL 1192
Query: 406 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKY 465
M+R+++L+LA L++ + I + +LEAITT +C E F +E LE LGDS LKY
Sbjct: 1193 MYRMETLMLASQLRS----EVAYDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKY 1248
Query: 466 AASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGD- 524
A S LF + N HEG LS + IISNAAL +LG +HK+ G+IR FDP+ W+ PG
Sbjct: 1249 AVSCHLFLKFPNKHEGQLSSSRTDIISNAALYRLGIEHKIQGYIRDAAFDPRRWLAPGQL 1308
Query: 525 -----------NSGSYELNDHSLFNERKIYV-----TGRKKVKSKTVADVVEALIGAFLS 568
+S + H + ++ I + G + + SKT++D VEA+IGA+
Sbjct: 1309 TNRPFHCKCPVDSEVVTKDIHVIDDKPTIKIGQACDKGHRWMCSKTISDCVEAIIGAYYV 1368
Query: 569 TGGENVGLIFLDRIGIKVD-----FVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSL 623
GG + FL +G+ + + Q ++ L + L Y+F L
Sbjct: 1369 GGGLRAAVAFLRWLGVDAEIEEELIMQTILSASMQTYLPKIDLTEALGAKLGYAFSVKGL 1428
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
L+EALTH S+ E YQRLEFLGDA LD L+T +L+N + G+LTD+RSASVNN
Sbjct: 1429 LLEALTHPSHQESEERYSYQRLEFLGDAALDILLTWHLFNSHKDTDEGELTDLRSASVNN 1488
Query: 684 DCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-ESTFGWESETSFPKALGDII 742
+ +A +VKH H + H+S+ L I +S E S+ E ++ PK LGDI+
Sbjct: 1489 ENFAKVAVKHKFHHFLQHSSEILLDQITEYANSLENSSMDEINLSSDAPLRGPKVLGDIV 1548
Query: 743 ESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF--SMKKTV 800
ES++GAI +D+ + +VV+ +PLL P++TPE + L P REL E+C ++ + +K T
Sbjct: 1549 ESIAGAILIDTKLDLDVVWGVFKPLLSPIVTPENLELPPFRELLEWCNRNGYFLGIKCTD 1608
Query: 801 APRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ ++V L +K+ AK A+ +LK L+
Sbjct: 1609 GEKLQ----AILDVQLKDMLVVRRGFGKNKKDAKAHAASMLLKDLE 1650
>gi|357131511|ref|XP_003567380.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1183
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 267/904 (29%), Positives = 427/904 (47%), Gaps = 117/904 (12%)
Query: 34 KPTPKFDINKEMGICTLYLPNN---CPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTD 90
+P+ +F + + +CTL LP++ P++ A+ K KQ CL+ACK+L +G D
Sbjct: 144 RPSFEFTHHDDGFVCTLTLPSSDVLPPLEGPKARSKQKA-KQLVCLDACKQLDLLGVHDD 202
Query: 91 NLLPD-------------VVVEEHDAQK----HGNEPYDAEHPIYFPPELVNQCPQDTKI 133
L P V+ QK HG A + V + Q K+
Sbjct: 203 CLCPSLKEPPVEIVNKASVLTSNAGVQKRKELHGTTRACAFSGTWASKRTVIKL-QGYKL 261
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
+ C + K + + VL + T + +E ++ +L + + ++ G ++L
Sbjct: 262 NFSCDQVGQKYS--------EFVLLIDTTIANEAANLDINLYLHDKMVKASVSPCGLLEL 313
Query: 194 TPDKVLLCRRFQIALFRVIM--------DHNLDK---LNEILKGLWLRDNLEIDYLLLPA 242
++ + FQ +F + N + LN+ +W N+ YLLLP
Sbjct: 314 DVQQMEQVKLFQALIFNGLFGKLFTGSKSSNSSREFILNKDDNLIWNNANM---YLLLPM 370
Query: 243 SEQ-------SIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKS--GPL-----CTC 288
I+W + + + K H + M+ ++ G L +C
Sbjct: 371 DPTLESHDSFCINWRVIDEAATAVRLMRKIHSD-GKMNLLAILDFDQIYGDLIHLANTSC 429
Query: 289 MIY---NSVVCTPHSGQIYYITGVLGHLNANSLF----TRNDGGAITYKKHYEERYGIQL 341
++ N V H+G+IY V L+ANS F ++ + G T+ +++E++Y I L
Sbjct: 430 EVHTLRNVAVLAVHTGKIYTALHVT-DLSANSTFDGVSSKKESGFKTFTEYFEKKYDIVL 488
Query: 342 CFDQELLLNGRRIFHAQNYLSK-------CRQEKQREPS----KIS--FELPPELCRIIM 388
+ LL + + N LS C E + + + K++ +PPEL +
Sbjct: 489 RHPSQPLLVLKPSHNPHNLLSSKIRDEGPCYGENKNDGTTDVIKVNNRVHMPPELLIPLN 548
Query: 389 GPMS-LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
P L FY F PS+M+R+++L+LA L++ + + I + +LEAITT +C
Sbjct: 549 LPEDILRAFYLF---PSLMYRMETLMLASQLRSEI----AYDSNISSFLILEAITTLRCS 601
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
E F +E LE LGDS LKYA S LF + + HEG LS + IISNAAL +LG HK+ G
Sbjct: 602 EDFSMERLELLGDSVLKYAVSCHLFLKFPDKHEGQLSSSRIDIISNAALHRLGIKHKIQG 661
Query: 508 FIRTEPFDPKMWMIPGDNSG---------SYEL--NDHSLFNERKIYVTGRKKVK----- 551
+IR FDP+ W+ PG + YE+ D + +E+ G+ K
Sbjct: 662 YIRDAAFDPRRWLAPGQRTNRPFHCKCPVDYEVVTKDIHVIDEKPTIKIGQACDKGHRWM 721
Query: 552 -SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPYERQFQVQAERLV 605
SKT++D VEA+IGA+ GG + L +G+ + + + ++
Sbjct: 722 CSKTISDCVEAIIGAYYVGGGLRAAVAVLRWLGVDAEIEEELIMQTILSASMKTYVPKID 781
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
V LE+ L Y+F LL+EALTH S+ E Y+RLEFLGDA LD L+T +L++ +
Sbjct: 782 LVEALEAKLGYAFSVKGLLLEALTHPSHQESEERYSYERLEFLGDAALDILLTWHLFSSH 841
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-ES 724
G+LTD+RSASVNN+ +A +VKH LH + +S L I +S E S+ E
Sbjct: 842 KDTDEGELTDLRSASVNNENFAKVAVKHKLHHFLQQSSGILLDQITEYANSLENSSMDEI 901
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
++ PK LGDI+ES++GAI +D+ + +VV +PLL P++TPE + L P RE
Sbjct: 902 NLSSDAPLRGPKVLGDIVESIAGAILIDTKLDLDVVRGVFKPLLSPIVTPENLELPPFRE 961
Query: 785 LNEYCQKHHF--SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
L E+C K+ + +K T +I ++V L +K+ AK A+ +L
Sbjct: 962 LLEWCNKNGYFLGIKCTDGDKIQA----ILDVQLEDVLVIRRGFGKNKKDAKAHAASMLL 1017
Query: 843 KSLK 846
K L+
Sbjct: 1018 KDLE 1021
>gi|357512663|ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1965
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 203/552 (36%), Positives = 289/552 (52%), Gaps = 71/552 (12%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLS------KCRQEKQREPSKISFE--LPPELCRII 387
RYG+ L + Q+ L+ GR + + +N LS + +++ E ++ LPPELC +
Sbjct: 1324 RYGVDLAYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEDETEETHDKTYYVFLPPELC--L 1381
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+ S +PSIM R++S+LLAV LKNM+ N + SK+LEA+T CQ
Sbjct: 1382 VHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMI------NYPVQASKILEALTAASCQ 1435
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
E F E E LGD++LK+ S+ LF + HEG L+ + +++SN L + L
Sbjct: 1436 ETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSKGLQS 1495
Query: 508 FIRTEPFDPKMWMIPG-----DNSGSYELNDHSLFN-ERKIYVTGR-------------- 547
+I + F P W PG D E + SLF+ ER I+ R
Sbjct: 1496 YILADRFAPSRWAAPGVLPVFDEDTKDE--ESSLFDQERSIFKAERMDNTDEFEDEMEDG 1553
Query: 548 ---------KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQ 598
+ + SKT+ADVVEALIG + GG+N + IGI ++ P E +
Sbjct: 1554 ELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEI--DPDEMECI 1611
Query: 599 VQAE-------RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
+ R V+ LE LN F+D LL+E++TH S + CYQRLEF+GDA
Sbjct: 1612 TKPSNVPDSILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGVS-CYQRLEFVGDA 1670
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN 711
VLD+LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K I
Sbjct: 1671 VLDHLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQIK 1730
Query: 712 ITV----DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
V D + S FG + PK LGDI+ES++GAIF+DSG N VV++ +PL
Sbjct: 1731 DFVKEVQDELSKPGFNS-FGL-GDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPL 1788
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHAD 827
L PM+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1789 LHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRAGN---LATVEVFIDG-----VQVG 1840
Query: 828 ADKETAKKVASK 839
A + KK+A K
Sbjct: 1841 AAQNPQKKMAQK 1852
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 48 CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C L LP N P + + +I+ +Q CL AC+KLH++GA TD LLPD E +
Sbjct: 855 CRLQLPCNAPFENLEGPICSSIRLAQQAVCLAACRKLHEMGAFTDMLLPDKGSGEEKEKA 914
Query: 106 HGNE-----PYDAEHPIYFP 120
N+ P A H ++P
Sbjct: 915 EQNDEGDALPGTARHREFYP 934
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 724 FDLAKTVLAYIQSRGRARKPGSDYILMVER 753
>gi|297848414|ref|XP_002892088.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
gi|297337930|gb|EFH68347.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
Length = 1962
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 284/527 (53%), Gaps = 64/527 (12%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGP 390
RYG+ L Q+ L+ GR + + +N LS R E+ E I + LPPELC ++ P
Sbjct: 1315 RYGVDLNCKQQPLIKGRGVSYCKNLLSP-RFEQSGESETILDKTYYVFLPPELC--VVHP 1371
Query: 391 MSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGF 450
+S S +PSIM R++S+LLAV LKN++ + IPTSK+LEA+T CQE F
Sbjct: 1372 LSGSLVRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETF 1425
Query: 451 HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIR 510
E E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+
Sbjct: 1426 CYERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQ 1485
Query: 511 TEPFDPKMWMIPG----------DNSGSY-------------------ELNDHSLFNERK 541
+ F P W PG D S+ E+ D L +
Sbjct: 1486 ADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLS 1545
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ- 600
Y + + SKT+ADVVEALIG + GG+ + IGI V+ + P E + V+
Sbjct: 1546 SY----RVLSSKTLADVVEALIGVYYVEGGKVAANHLMKWIGIHVE--DDPDEVEGTVKN 1599
Query: 601 ------AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 654
+ ++ LE L + F++ LLVEA+TH S + CYQRLEF+GDAVLD
Sbjct: 1600 VNVPESVLKSIDFVGLERALKFEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLD 1658
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
+LIT +L+ Y +L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K I V
Sbjct: 1659 HLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFV 1718
Query: 715 DSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
+ S + ++FG + PK LGDI+ES++GAIF+DSG + ++ +PLL+PM
Sbjct: 1719 KEVQTESSKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPM 1777
Query: 772 ITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1778 VTPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDG 1821
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 48/245 (19%)
Query: 48 CTLYLPNNCPIQTVIAQG----NIKTLKQTACLEACKKLHQIGALTDNLLPDVV----VE 99
C L LP N P + I +G +++ +Q CL ACKKLH++GA TD LLPD E
Sbjct: 872 CRLQLPCNAPFE--ILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAE 929
Query: 100 EHDAQKHGNE-PYDAEHPIYFPPELVN-----------QCPQDTKITYHCYLIEL----- 142
+ D G P A H ++P + + + + +K+ +H Y+ +
Sbjct: 930 KVDQDDEGEPVPGTARHREFYPEGVADVLKGEWILSGKEICESSKL-FHLYMYSVRCVDL 988
Query: 143 ---KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKV 198
K F ++ I+ EL++E+ ++ DL V R +T +L G + +T +++
Sbjct: 989 GSSKDPFLTEVSEFAILFG--NELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQL 1046
Query: 199 LLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASE-------QSIDWEP 251
++F + L +++D ++ E W + YL +P S+ + I+WE
Sbjct: 1047 SSLKKFHVRLMSIVLDVDV----EPSTTPW---DPAKAYLFVPVSDNTSIEPIKGINWEL 1099
Query: 252 VASLS 256
V ++
Sbjct: 1100 VEKIT 1104
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 741 FDLAKTVLAYIQSRGRARKPGSDYILMVER 770
>gi|62320294|dbj|BAD94606.1| CAF protein [Arabidopsis thaliana]
Length = 690
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 282/532 (53%), Gaps = 72/532 (13%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGP 390
RYG+ L Q+ L+ GR + + +N LS R E+ E + + LPPELC ++ P
Sbjct: 43 RYGVDLNCKQQPLIKGRGVSYCKNLLSP-RFEQSGESETVLDKTYYVFLPPELC--VVHP 99
Query: 391 MSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGF 450
+S S +PSIM R++S+LLAV LKN++ + IPTSK+LEA+T CQE F
Sbjct: 100 LSGSLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETF 153
Query: 451 HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIR 510
E E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+
Sbjct: 154 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQ 213
Query: 511 TEPFDPKMWMIPG----------DNSGSY-------------------ELNDHSLFNERK 541
+ F P W PG D S+ E+ D L +
Sbjct: 214 ADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLS 273
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVN 590
Y + + SKT+ADVVEALIG + GG+ + IGI V+ VN
Sbjct: 274 SY----RVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVN 329
Query: 591 VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
VP + ++ LE L Y F++ LLVEA+TH S + CYQRLEF+GD
Sbjct: 330 VPE------SVLKSIDFVRLERALKYEFKEKGLLVEAITHASRPSSGV-SCYQRLEFVGD 382
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVLD+LIT +L+ Y +L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K I
Sbjct: 383 AVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQI 442
Query: 711 NITVDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
V + S + ++FG + PK LGDI+ES++GAIF+DSG + ++ +PL
Sbjct: 443 REFVKEVQTESSKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPL 501
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGT 819
L+PM+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 502 LQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDGV 550
>gi|110520367|gb|ABG74922.1| Dicer-like 1b protein [Physcomitrella patens]
Length = 1695
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 201/620 (32%), Positives = 316/620 (50%), Gaps = 87/620 (14%)
Query: 289 MIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCF 343
++ +V HSG+ Y+ V + A+S F + DG G + +Y +Y+++YG++L
Sbjct: 986 VLVGRIVTAVHSGKRLYVDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVELVC 1045
Query: 344 DQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE---------LPPELCRIIMGPMSLS 394
++ LL GR + H +N LS + E S S + LPPELC ++ P+ S
Sbjct: 1046 KKQPLLRGRGVSHCKNLLSP-----RFETSGDSLDALDKTYYVMLPPELC--LIHPLPGS 1098
Query: 395 TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLES 454
+PS+M R++S+LLA+ LK+ + + I SKV A+T QE F E
Sbjct: 1099 LVRGAQRLPSVMRRVESMLLAIQLKHQI------DYPIAASKV--ALTAASGQETFSYER 1150
Query: 455 LETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPF 514
E L D++L++ S +LF + + HEG L+ + +I+SN+ L + + L +I+ + F
Sbjct: 1151 AELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQHALEKGLQSYIQADRF 1210
Query: 515 DPKMWMIPGD----------------------------------------NSGSYELNDH 534
P W PG N+ S + D
Sbjct: 1211 APSRWAAPGVPPAFDEDLRDGDDSDKESKPEVEREVVEIVGEEGEIVKELNTESENMEDG 1270
Query: 535 SLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE 594
+ + Y + + SKT+ADVVE +G + GG F++ +GI V+F +V +
Sbjct: 1271 EIEGDSGSY----RVLSSKTLADVVEVFMGMYYVEGGGEAATHFMNWVGIPVEFDDVETD 1326
Query: 595 R-----QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
Q R ++ L+ + + FR+ SLLVEA+TH S +P CYQRLEF+G
Sbjct: 1327 LATGGCQVPETVMRSIDFSSLQKNVGHEFRERSLLVEAITHASRPSLGVP-CYQRLEFVG 1385
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
DAVLD+LIT YL+ KY L PG LTD+R+A+VNN+ +A +VKH H H+ H S L
Sbjct: 1386 DAVLDHLITRYLFFKYTNLPPGRLTDLRAAAVNNENFARVAVKHSYHLHLRHGSTALETQ 1445
Query: 710 I-NITVDSFERLSLE--STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRP 766
I N D L ++FG + PK LGDI ES++GA+F+D+ + V++ P
Sbjct: 1446 IRNFVNDIHSELDKPGVNSFGL-GDFKAPKVLGDIFESIAGALFLDARLDTHQVWKVFEP 1504
Query: 767 LLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHA 826
LL+PM++PET+ + P R L E CQ+ ++ V+ ++ TVEV+ +G T +
Sbjct: 1505 LLQPMVSPETLPIHPVRGLQERCQQEAEGLEYKVS---RAESVATVEVYVDGVQIGSTQS 1561
Query: 827 DADKETAKKVASKEVLKSLK 846
A K+ A+K+ ++ L LK
Sbjct: 1562 -AQKKMAQKLGARNALVKLK 1580
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 32/220 (14%)
Query: 31 RYFKPTPKFDINK---EMGI----CTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKK 81
RY P+F +NK + G C L LP + P + V +++ +Q+ LE +K
Sbjct: 629 RYSLLRPEFIMNKIEDQRGAIRYSCRLQLPCHAPFEAVEGPECNSMRGAQQSCVLEGLQK 688
Query: 82 LHQIGALTDNLLPDVVVEEHDAQKHGNE-----PYDAEHPIYFPPELVNQCPQD------ 130
+H++GA TD LL + E A+ G+E P + H Y+P + + D
Sbjct: 689 MHEMGAFTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIADILKGDRIVAEK 748
Query: 131 -------TKITYHCYLIELKQ-NFNYD---IPAHDIVLAVRTELESEIKKVNFDLEVDRG 179
+K+ Y ++ + F+ D D L V +L ++ + +L V
Sbjct: 749 DSDTKEGSKVLVFMYTVKCENVGFSRDSLLTETSDFTLLVGQQLHDQVLTMTINLFVANP 808
Query: 180 RLTVNLKHLGK-IQLTPDKVLLCRRFQIALFRVIMDHNLD 218
L + + + + + ++ + F + L +++D N++
Sbjct: 809 TLLITMSWKKRDLDCSNSQLTELKSFHVRLMSIVLDVNVE 848
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 522 FDLAKTVLAYIQSRGRARKPGSDYILMLER 551
>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
III, bacterial [Medicago truncatula]
Length = 1939
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 292/553 (52%), Gaps = 67/553 (12%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLS------KCRQEKQREPSKISFE--LPPELCRII 387
RYG+ L + Q+ L+ GR + + +N LS + +++ E ++ LPPELC +
Sbjct: 1292 RYGVDLAYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEDETEETHDKTYYVFLPPELC--L 1349
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS-KVLEAITTKKC 446
+ P+ S +PSIM R++S+LLAV LKNM+ ++ +Q + + K+LEA+T C
Sbjct: 1350 VHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMI-NYPVQASKVSSQLKILEALTAASC 1408
Query: 447 QEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLP 506
QE F E E LGD++LK+ S+ LF + HEG L+ + +++SN L + L
Sbjct: 1409 QETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSKGLQ 1468
Query: 507 GFIRTEPFDPKMWMIPG-----DNSGSYELNDHSLFN-ERKIYVTGR------------- 547
+I + F P W PG D E + SLF+ ER I+ R
Sbjct: 1469 SYILADRFAPSRWAAPGVLPVFDEDTKDE--ESSLFDQERSIFKAERMDNTDEFEDEMED 1526
Query: 548 ----------KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF 597
+ + SKT+ADVVEALIG + GG+N + IGI ++ P E +
Sbjct: 1527 GELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEI--DPDEMEC 1584
Query: 598 QVQAE-------RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
+ R V+ LE LN F+D LL+E++TH S + CYQRLEF+GD
Sbjct: 1585 ITKPSNVPDSILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGVS-CYQRLEFVGD 1643
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVLD+LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K I
Sbjct: 1644 AVLDHLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQI 1703
Query: 711 NITV----DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRP 766
V D + S FG + PK LGDI+ES++GAIF+DSG N VV++ +P
Sbjct: 1704 KDFVKEVQDELSKPGFNS-FGL-GDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQP 1761
Query: 767 LLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHA 826
LL PM+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1762 LLHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRAGN---LATVEVFIDG-----VQV 1813
Query: 827 DADKETAKKVASK 839
A + KK+A K
Sbjct: 1814 GAAQNPQKKMAQK 1826
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 48 CTLYLPNNCPIQTVIAQGNI-KTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQKH 106
C L LP N P + + +G I +++ AC+KLH++GA TD LLPD E +
Sbjct: 855 CRLQLPCNAPFENL--EGPICSSIRLAQQASACRKLHEMGAFTDMLLPDKGSGEEKEKAE 912
Query: 107 GNE-----PYDAEHPIYFPPELV------------NQCPQDTKITYHCYLIELKQNFNYD 149
N+ P A H ++P + + C + + Y I+ + +
Sbjct: 913 QNDEGDALPGTARHREFYPEGVADILKGEWILSGKDACNNSKLLHLYMYTIKCENVGHSK 972
Query: 150 IP----AHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCRRF 204
P D + TEL++E+ ++ DL + R T +L I +T ++ + F
Sbjct: 973 DPFLTQVSDFAVLFGTELDAEVLSMSMDLFIARTVTTKASLVFRESIDITESQLTSLKSF 1032
Query: 205 QIALFRVIMDHNLD 218
+ L +++D +++
Sbjct: 1033 HVRLMSIVLDVDVE 1046
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 724 FDLAKTVLAYIQSRGRARKPGSDYILMVER 753
>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 213/646 (32%), Positives = 317/646 (49%), Gaps = 138/646 (21%)
Query: 288 CMI----YNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEE--- 335
CM+ +V HSG+ +Y+ + ++A + F R +G G + TY +Y++
Sbjct: 1261 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKIY 1320
Query: 336 -----------------------------RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQ 366
RYG+ L Q+ L+ GR + + +N LS R
Sbjct: 1321 VVQDRLFFYFLHNLRLLRLYKSSSIMLFIRYGVDLNCKQQPLIKGRGVSYCKNLLSP-RF 1379
Query: 367 EKQREPSKISFE-----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNM 421
E+ E + + LPPELC ++ P+S S +PSIM R++S+LLAV LKN+
Sbjct: 1380 EQSGESETVLDKTYYVFLPPELC--VVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNL 1437
Query: 422 LLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
+ + IPTSK+LEA+T CQE F E E LGD++LK+ S+ LF Y HEG
Sbjct: 1438 I------SYPIPTSKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1491
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG----------DNSGSY-- 529
L+ + +++SN L + L +I+ + F P W PG D S+
Sbjct: 1492 QLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFD 1551
Query: 530 -----------------ELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
E+ D L + Y + + SKT+ADVVEALIG + GG+
Sbjct: 1552 EEQKPVSEENSDVFEDGEMEDGELEGDLSSY----RVLSSKTLADVVEALIGVYYVEGGK 1607
Query: 573 NVGLIFLDRIGIKVD-----------FVNVPYERQFQVQAERLVNVRHLESLLNYSFRDP 621
+ IGI V+ VNVP + ++ LE L Y F++
Sbjct: 1608 IAANHLMKWIGIHVEDDPDEVDGTLKNVNVPE------SVLKSIDFVGLERALKYEFKEK 1661
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y +L PG LTD+R+A+V
Sbjct: 1662 GLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAV 1720
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWIN-------ITVDSFERLSLESTFGW------ 728
NN+ +A +VKH LH ++ H S L K +N + SF+ L++ F +
Sbjct: 1721 NNENFARVAVKHKLHLYLRHGSSALEKQVNKIKKQSILFSKSFKCLTVWLLFVFQIREFV 1780
Query: 729 ---ESETS-------------FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
++E+S PK LGDI+ES++GAIF+DSG + ++ +PLL+PM+
Sbjct: 1781 KEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMV 1840
Query: 773 TPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1841 TPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDG 1883
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 33/200 (16%)
Query: 48 CTLYLPNNCPIQTVIAQGNIKTLKQTA-----CLEACKKLHQIGALTDNLLPDVV----V 98
C L LP N P + I +G + + + A + ACKKLH++GA TD LLPD
Sbjct: 934 CRLQLPCNAPFE--ILEGPVCSSMRLAQQVDIIVSACKKLHEMGAFTDMLLPDKGSGQDA 991
Query: 99 EEHDAQKHGNE-PYDAEHPIYFPP--------ELVNQCPQ--DTKITYHCYLIEL----- 142
E+ D G P A H ++P E V+ + ++ +H Y+ +
Sbjct: 992 EKADQDDEGEPVPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDF 1051
Query: 143 ---KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKV 198
K F ++ I+ EL++E+ ++ DL V R +T +L G + +T +++
Sbjct: 1052 GSSKDPFLSEVSEFAILFG--NELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQL 1109
Query: 199 LLCRRFQIALFRVIMDHNLD 218
++F + L +++D +++
Sbjct: 1110 SSLKKFHVRLMSIVLDVDVE 1129
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKRYFK 34
FD + TV ++IQSRGRAR SDY+LM++RY K
Sbjct: 773 FDLAKTVLAYIQSRGRARKPGSDYILMVERYIK 805
>gi|297815500|ref|XP_002875633.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
gi|297321471|gb|EFH51892.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
Length = 1521
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 231/772 (29%), Positives = 370/772 (47%), Gaps = 105/772 (13%)
Query: 157 LAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR------ 210
L + + L ++ V DL + R + ++ G+I+L+ ++++ + FQ F
Sbjct: 624 LLLESTLAEDVGNVEMDLYLVRKLVKASVSPCGQIRLSQEELVKGKYFQQFFFNGMFGKL 683
Query: 211 VIMDHNLDKLNEIL-----KGLWLRDNLEIDYLLLP------ASEQSIDWEPVASLSFPC 259
+ + E L LW + +LLLP AS +IDW + S +
Sbjct: 684 FVGSKSQGTKREFLLQTDTSSLW---HPSFMFLLLPVETKDLASSATIDWSAINSCASIV 740
Query: 260 D---------IGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNS-----------VVCTPH 299
+ + + C+T S+ V+ + + + VV H
Sbjct: 741 EFLKKNSLLELQVSDGNQCNTSSDQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIH 800
Query: 300 SGQIYYITGVLGHLNANSLFTRNDGGA-ITYKKHYEERYGIQLCFDQELLLNGRRIFHAQ 358
+G+IY I + +A S F + TY +++ ++YGI L + L+ ++ HA
Sbjct: 801 TGRIYSIVEAVRDSSALSPFECDASSEYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAH 860
Query: 359 NYLSKCRQE------------KQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIM 406
N L +E ++++P+ I LPPEL I P ++ S +PS+M
Sbjct: 861 NLLVDFNEEMVVKAEPKAGNVRKKKPN-IHAHLPPELLARIDVPRAV--LKSIYLLPSVM 917
Query: 407 HRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYA 466
HRL+SL+LA L+ + D + N +I ++ +LEA+TT C E F +E LE LGDS LKY
Sbjct: 918 HRLESLMLASQLREEI-DCSIDNFSISSTSILEAVTTLTCPEAFSMERLELLGDSVLKYV 976
Query: 467 ASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS 526
AS LF Y + EG LS ++ IISN+ L +L + KL G+IR F+P+ W PG S
Sbjct: 977 ASCYLFLKYPDKDEGQLSRQRQSIISNSNLHRLATNRKLQGYIRNGAFEPRRWTAPGQFS 1036
Query: 527 ----------GSYELN-DHSLFNERKIYVTGR------KKVKSKTVADVVEALIGAFLST 569
+ E+ D F E G+ + SK+V+D EALIGA+ +
Sbjct: 1037 LFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWTVSKSVSDCAEALIGAYYVS 1096
Query: 570 GGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR----------HLESLLNYSFR 619
GG L + +G+ VDF + V+A V++R LE + + F
Sbjct: 1097 GGLTASLHMMKWLGVNVDF-----DPNLVVEAISRVSLRCYIPKDDELTELERKIQHEFS 1151
Query: 620 DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSA 679
LL EA+TH S Y+RLEFLGD+VLD+LIT +L+N Y PG++TD+RSA
Sbjct: 1152 AKFLLKEAITHSSV---HESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSA 1208
Query: 680 SVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER-----LSLESTFGWESETSF 734
VNN+ +A +VK+ LH H+ + L IN + SF++ S+ S G
Sbjct: 1209 CVNNENFAQVAVKNNLHIHLQRCATVLENQINEYLMSFQKPDETGRSIPSIQG------- 1261
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PKALGD++ES++GA+ +D+ + + V+ PLL P++TP+ ++L P RELNE C +
Sbjct: 1262 PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGY 1321
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ + KA T+ + L ++ + A A+ +L L+
Sbjct: 1322 FFREKCS-NDGVKAQATIHLQLGDVLLTGDGSEQTNKLALGKAASHLLTQLE 1372
>gi|116788280|gb|ABK24820.1| unknown [Picea sitchensis]
Length = 330
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 209/309 (67%), Gaps = 5/309 (1%)
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAE 602
+ G + +K+K VADVVEALIGA L TGGE V L F+ +G+ +D +P+ R+
Sbjct: 18 IKGYRMMKTKNVADVVEALIGACLETGGETVALSFVKWLGMDIDIPQEMPFTRKLDTGFV 77
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
VNVR+LESLL YSFR +L+VE++TH SY P CYQRLEFLGDAVLDYLIT+Y Y
Sbjct: 78 SNVNVRYLESLLKYSFRVHTLVVESVTHASYKEPSFSGCYQRLEFLGDAVLDYLITLYFY 137
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN--ITVDSFERL 720
YP LSPG LTD+RSA+VNNDCYA ++VK LH+ + HAS EL+ I + S
Sbjct: 138 KTYPGLSPGLLTDLRSAAVNNDCYAQAAVKCNLHQQLRHASSELHNQITEFAKLISSSSA 197
Query: 721 SLESTFGW-ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
S + FGW +E + PK LGD+IES++GA+ VDS + ++V+ +++PLLEP++TP+T++
Sbjct: 198 SGDHFFGWTTTEVAVPKVLGDLIESIAGAVLVDSEFDTQLVWNAMKPLLEPLVTPKTIKY 257
Query: 780 QPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASK 839
QP REL E CQK ++ + G + V VEV G + T ++K TAKK+A++
Sbjct: 258 QPVRELQELCQKEFYTCCFDDSQE-EGTSTVKVEVRVKGDSYIETCEASNKRTAKKLAAE 316
Query: 840 EVLKSLKAS 848
+VLKSLKA+
Sbjct: 317 KVLKSLKAA 325
>gi|242076428|ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
gi|241939333|gb|EES12478.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
Length = 698
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 274/491 (55%), Gaps = 30/491 (6%)
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV 437
ELPPELC + + S S + +PS+M RL++LL+A+ LKN++ + + I S +
Sbjct: 6 ELPPELCSLKITGFSKDMGSSLSLLPSLMCRLENLLVAIELKNVMSSYFPEASQISASGI 65
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
LEA+TT++C E LE LE LGD+FLKY + F +Y+ EG L+ ++ I+SN+ L
Sbjct: 66 LEALTTERCLERISLERLEVLGDAFLKYVVGRHNFISYEGLDEGQLTRRRSDIVSNSNLY 125
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPG-------DNSGSYELNDHSLFNERKIYVTGR--- 547
+L L +IR + F+P + G + L+ ++ +R+ R
Sbjct: 126 ELSIRRNLQVYIRDQHFEPTQFFALGRPCKVVCNPDREATLHPKNIDPDRRENCNLRCTK 185
Query: 548 --KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL- 604
+ KT+ADVVE+L+GAFL G FL IGIKVDF N R + L
Sbjct: 186 SHHWLHRKTIADVVESLLGAFLVECGFKAAFAFLRWIGIKVDFENSALYRVLDASSTNLS 245
Query: 605 ----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
+N+ LE L+ Y+F+ LL++A H S+ CYQR+EFLGDAVLDYL+ Y
Sbjct: 246 LMNYMNISELEELIGYTFKHKGLLLQAFVHPSFN-KHSGGCYQRMEFLGDAVLDYLMASY 304
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN-----ITVD 715
LY+ YP L PG LTD++S ++NN+ +A +VK +HK+++ S+ L IN + +
Sbjct: 305 LYSAYPDLKPGQLTDLKSLALNNNSFAYVAVKKSIHKYLIKDSKSLTAAINKFQNYVNLS 364
Query: 716 SFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
S E+ LE E + PK LGDI+ES GA+ +DSG N V++ + LL+P+++
Sbjct: 365 SSEKDLLE-------EPTCPKVLGDIVESCVGAVLLDSGFNLNHVWKLMLMLLKPILSFC 417
Query: 776 TMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKK 835
M + P REL E CQ + F + NG+ V VEV+ +G + T A+ + + A+K
Sbjct: 418 GMHIDPMRELREICQYNGFELGLPKPTEDNGEFHVKVEVNIDGKMISCTAANRNSKDARK 477
Query: 836 VASKEVLKSLK 846
VA++E L LK
Sbjct: 478 VAAQEALLKLK 488
>gi|449453061|ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
Length = 1359
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/535 (35%), Positives = 278/535 (51%), Gaps = 41/535 (7%)
Query: 299 HSGQIYYITGVLGHLNANSLFTRN-DGGA---ITYKKHYEERYGIQLCFDQELLLNGRRI 354
H+G+IY I V+ + +A S F N D G IT+ ++ +RYGI L F ++ LL ++
Sbjct: 641 HTGRIYSIVEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQS 700
Query: 355 FHAQNYLSKCRQE---KQREPSKISFE-------LPPELCRIIMGPMSLSTFYSFTFVPS 404
+ N L + E + PS +F+ +PPEL + P + S +PS
Sbjct: 701 HNPHNLLVNFKDEGNTSDKLPSGPAFKRPQMHVHMPPELVLSMDVPKGV--LKSSYLLPS 758
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLK 464
++HR +SL+LA L+ + H ++ I +S +LEA+TT E F LE LE LGDS LK
Sbjct: 759 LIHRFESLMLASQLRKEINYHS-NSLGISSSLILEALTTLGSCENFSLERLELLGDSVLK 817
Query: 465 YAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGD 524
YA S LF + HEG LS ++ ++I NA L LG L G+IR FDP+ W+ PG
Sbjct: 818 YAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSAFDPRRWVAPGQ 877
Query: 525 ------------NSGSYELNDHSLFNERKIYV-----TGRKKVKSKTVADVVEALIGAFL 567
++ L+D + K+ + G + V SKT+AD EALIGA+
Sbjct: 878 CTNRPVPCKCGVDTVEVPLHDKFCTEDPKVVLGKCCDKGHRWVVSKTIADCAEALIGAYY 937
Query: 568 STGGENVGLIFLDRIGIKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPS 622
GG L + +GI V+ V+ + + LES + Y F
Sbjct: 938 VDGGIIAALHVMKWLGIDVNLDVALVVDAITSASLRSCPLGDTEIATLESKIGYDFAVKG 997
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
LL+EA+TH S + CYQRLEFLGD+VLD LIT + Y Y + PG+LTD+RSASVN
Sbjct: 998 LLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDPGELTDLRSASVN 1057
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDII 742
N+ +A +V+ L +H+ H S L I V + T PK LGD++
Sbjct: 1058 NENFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLSE--SQDTGKPLHGNKGPKVLGDMV 1115
Query: 743 ESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
ES++GAI +D+ N + V++ +PLL P +TP+ + L P REL E C + +K
Sbjct: 1116 ESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELIELCDSLGYFIK 1170
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV S++QSRGRAR NS Y+L+L+R
Sbjct: 492 FDLPKTVRSYVQSRGRARQNNSQYILLLER 521
>gi|302772092|ref|XP_002969464.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
gi|300162940|gb|EFJ29552.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
Length = 1255
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 247/445 (55%), Gaps = 44/445 (9%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S++LEA T+ +CQ+GF E LE LGDS LKYA +++L+ + HEG LS ++ I N+
Sbjct: 813 SQILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNS 872
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------------DNSGSYELND----HSLF 537
L KL LP ++R EPF P W+ G DN + E + + +
Sbjct: 873 TLRKLAVAQDLPMYVRDEPFYPSYWVGAGMYRQRSRKCCCRLDNLVTKESSKPRPTDATY 932
Query: 538 NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN------- 590
K G + + SKT +D +EALIGA+ GG + L F+ + + VDF +
Sbjct: 933 YVGKTCGQGHRWMCSKTTSDALEALIGAYTVGGGFDGALEFMKALQVDVDFDSGLIAASQ 992
Query: 591 ---VPYER-QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLE 646
VP + QF + A + LE L Y+F++ +LL+EA+TH S P+ CYQRLE
Sbjct: 993 HRPVPLDAVQFHMPA-----LLSLEKELCYTFQNKALLLEAITHAS--TPDTVFCYQRLE 1045
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
F+GDAVLD+L+T +L+ +P LSPG L+D+RSASVNNDC A +VKH LH ++ H S EL
Sbjct: 1046 FIGDAVLDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAEL 1105
Query: 707 YKWINITVDSFER-LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIR 765
IN +D +R FG+++ S PKAL DI+ES++GAI VDSG + E ++ ++
Sbjct: 1106 RAKINSFLDVLDRDPECSVMFGFKA-LSGPKALADIVESVAGAILVDSGFDFEKLWVVLK 1164
Query: 766 PLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEV--HANGTLFKH 823
LL P +TP T+ P RE +E C S K + + T E+ A F
Sbjct: 1165 RLLSPFVTPATLSFHPVREFHELC-----SYKSWEFEWVQSSSGATAEILLKAGEQRFTE 1219
Query: 824 THADADKETAKKVASKEVLKSLKAS 848
+ +K+ A+K ++++L LK +
Sbjct: 1220 VSSIKNKKDARKDVAEKLLTMLKVN 1244
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 143/342 (41%), Gaps = 41/342 (11%)
Query: 31 RYFKPTPKFDI------NKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKL 82
RY+ P P+ ++ N+E+ CT+ P N P+ + + N + K+ ACLEAC++L
Sbjct: 463 RYYNPKPEIEVTKCESDNEELFSCTITFPPNAPLHVLTGPPKRNKQLAKKVACLEACRQL 522
Query: 83 HQIGALTDNLLPDVVVEEHDAQKHG------NEPYDAEHPIYFPPELVNQCPQDTKITYH 136
+GAL + P+V E+ ++ G E + + + + + T I H
Sbjct: 523 DALGALGERHPPEVREEKMASEGPGLGSTKLKELFPSIKSTTYQRQWITT---STDIILH 579
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRL------TVNLKHLGK 190
Y + N + L L+ ++ + +L + + R + + +
Sbjct: 580 IYALIFHPEENGSTYT-NFGLLFDAALDDDVGNIEVNLYLTKNRAVKAKLSSAGQRRVDS 638
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID------YLLLPASE 244
+QL K F A R++ DK + L L + + YLLLP +
Sbjct: 639 VQLAAAKAYQEIMFNGAFSRLVFRE--DKNDRTLATCLLSSTEKANELWSETYLLLPILD 696
Query: 245 QS--IDWEPVASLSFPCDI------GLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVC 296
S IDW V + + L + C +A ++ T SGP+ + ++VV
Sbjct: 697 GSCDIDWNIVTRCADAAKLLPSLCSELNKTEVCMERPDAGLIYTASGPVSPGALQDAVVL 756
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGA-ITYKKHYEERY 337
T H+G+++ I VL L A S F N+ TY++ Y +Y
Sbjct: 757 TVHTGKLFSIVEVLEDLGAQSTFKENEESEPCTYEEFYLRKY 798
>gi|302755618|ref|XP_002961233.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
gi|300172172|gb|EFJ38772.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
Length = 1291
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 246/445 (55%), Gaps = 44/445 (9%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S++LEA T+ +CQ+GF E LE LGDS LKYA +++L+ + HEG LS ++ I N+
Sbjct: 849 SQILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNS 908
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------------DNSGSYELND----HSLF 537
L KL LP ++R EPF P W+ G DN + E + + +
Sbjct: 909 TLRKLAVAQDLPMYVRDEPFYPSCWVGAGMYRQRSRKCCCRLDNLVTKESSKPRPTDATY 968
Query: 538 NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN------- 590
K G + + SKT +D +EALIGA+ GG + L F+ + + VDF +
Sbjct: 969 YVGKTCGQGHRWMCSKTTSDALEALIGAYAVGGGFDGALEFMKALQVDVDFDSGLIAASQ 1028
Query: 591 ---VPYER-QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLE 646
VP + QF + A + LE L Y+F++ +LL+EA+TH S P+ CYQRLE
Sbjct: 1029 HRPVPLDAVQFHMPA-----LLSLEKELCYTFQNKALLLEAITHAS--TPDTVFCYQRLE 1081
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
F+GDAVLD+L+T +L+ +P LSPG L+D+RSASVNNDC A +VKH LH ++ H S EL
Sbjct: 1082 FIGDAVLDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAEL 1141
Query: 707 YKWINITVDSFER-LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIR 765
I +D +R FG+++ S PKAL DI+ES++GAI VDSG + E ++ ++
Sbjct: 1142 RAKITSFLDVLDRDPECSVMFGFKA-LSGPKALADIVESVAGAILVDSGFDFEKLWVVLK 1200
Query: 766 PLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEV--HANGTLFKH 823
LL P +TP T+ P RE +E C S K + + T E+ A F
Sbjct: 1201 RLLSPFVTPATLSFHPVREFHELC-----SYKSWEFEWVQSSSGATAEILLKAGEQRFTE 1255
Query: 824 THADADKETAKKVASKEVLKSLKAS 848
+ +K+ A+K ++++L LK +
Sbjct: 1256 VSSIKNKKDARKDVAEKLLTMLKVN 1280
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 41/342 (11%)
Query: 31 RYFKPTPKFDI------NKEMGICTLYLPNNCPIQ--TVIAQGNIKTLKQTACLEACKKL 82
R++ P P+ ++ N+E+ CT+ P N P+ T + + N + K+ ACLEAC++L
Sbjct: 499 RFYNPKPEIEVTKCESDNEELFSCTITFPPNAPLHVLTGLPKRNKQLAKKVACLEACRQL 558
Query: 83 HQIGALTDNLLPDVVVEEHDAQKHG------NEPYDAEHPIYFPPELVNQCPQDTKITYH 136
+GAL + P+V E+ ++ G E + + + + + T I H
Sbjct: 559 DALGALGERHPPEVREEKMASEGPGLGSTKLKELFPSIKSTTYQRQWITT---STDIVLH 615
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRL------TVNLKHLGK 190
Y + N + L L+ ++ + +L + + R + + +
Sbjct: 616 IYALIFHPEENGSTYT-NFGLLFDAALDDDVGNIEVNLYLTKNRAVKAKLSSAGQRRVDS 674
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID------YLLLPASE 244
+QL K F A R++ DK + L L + + YLLLP +
Sbjct: 675 VQLAAAKAYQEIMFNGAFSRLVFRE--DKNDRTLATCLLSSTEKANELWSETYLLLPILD 732
Query: 245 QS--IDWEPVASLSFPCDI------GLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVC 296
S IDW V + + L + C + ++ T SGP+ + ++VV
Sbjct: 733 GSCDIDWNIVTRCADAAKLLPSLCSELNKTEVCMERPDTGLIYTASGPVSPGALQDAVVL 792
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGA-ITYKKHYEERY 337
T H+G+++ I VL L A S F N+ TY++ Y +Y
Sbjct: 793 TVHTGKLFSIVEVLEDLGAQSTFKENEESEPCTYEEFYLRKY 834
>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 243/883 (27%), Positives = 408/883 (46%), Gaps = 150/883 (16%)
Query: 32 YFKPTPKFDI--NKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGA 87
YF P PKF + E +C + LP+N P ++ Q +I+ K+ ACL+A ++LH++GA
Sbjct: 615 YFDPKPKFFYFDDSEGTVCHIILPSNAPTHKIVGTPQSSIEVAKKDACLKAIEQLHKLGA 674
Query: 88 LTDNLLP------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYH--CYL 139
L++ LLP ++ + D+ ++ E P ++ + + + H Y
Sbjct: 675 LSEFLLPQQEDTNELELVSSDSDNCEDKDSRGELREMLVPAVLKESWTELEKPIHLNSYY 734
Query: 140 IELKQNFNYDIPAHDIV----LAVRTELESEIKKVNFDLEVDRGR-LTVNLKHLGKIQLT 194
IE +P I L ++ L E K++ +L + RGR + L G + +
Sbjct: 735 IEF-----CPVPEDRIYKQFGLFLKAPLPLEADKMSLELHLARGRSVMTKLVPSGLSKFS 789
Query: 195 PDKVLLCRRFQIALFRVIMDHNLDKLNEI--LKGLWLRDNLEIDYLLLPA----SEQ--S 246
D++ FQ + I+D + + ++E L L + YLLLP SE+ +
Sbjct: 790 TDEITHATNFQELFLKAILDRS-EFVHEYVPLGKDALSKSCPTFYLLLPVIFHVSERRVT 848
Query: 247 IDWEPVAS-LSFPC--------DIGLKHHKNCSTMSNARVVQTKSGPLCTCM--IYNSVV 295
+DWE + LS P D G+ +C ++N C+ + + NS+V
Sbjct: 849 VDWEIIRRCLSSPVFKNPANAVDKGILPSNDCLQLANG----------CSSIRDVENSLV 898
Query: 296 CTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIF 355
TPH + Y+IT ++ N +S ++ + H + +L QEL
Sbjct: 899 YTPHQKKFYFITNIVPEKNGDSPCKGSN-----TRSHKDHLTTTEL---QEL-------- 942
Query: 356 HAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA 415
++++ +L PELC + + S S + +PS+MHRL++LL+A
Sbjct: 943 -DEHFV----------------DLAPELCELKIIGFSKDIGSSISLLPSVMHRLENLLVA 985
Query: 416 VNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTY 475
+ LK +L + + +VLEA+TT+KCQE LE LETLGD+FLK+A + F +
Sbjct: 986 IELKCILSASFSEGDKVTAHRVLEALTTEKCQERLSLERLETLGDAFLKFAVGRHFFLLH 1045
Query: 476 QNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSY--ELND 533
EG L+ K+ SNA FIR +PFDP + G + ++
Sbjct: 1046 DTLDEGELTRKR----SNAV------------FIRDQPFDPYQFFALGHPCPRICTKESE 1089
Query: 534 HSLFNERKIYVTGRKK------------VKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
++ ++ +VTG+ K + +KTV+DVVEALIGAFL G + FL
Sbjct: 1090 GTIHSQCGSHVTGQAKGSEVRCSKGHHWLHNKTVSDVVEALIGAFLVDSGFKAAIAFLRW 1149
Query: 582 IGIKVDF-----VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
IGIKVDF +N+ + +++ LE+LL + F LL++A H S+
Sbjct: 1150 IGIKVDFDDSQVINICQASRTYAMLNPSMDLATLENLLGHQFLYKGLLLQAFVHPSHK-- 1207
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNK--------YPTLSPGDLTDMRSASVNNDCYAL 688
EF G +L + +T+ + YP + PG LTD+RS VNN +A
Sbjct: 1208 ------NGGEF-GVMILQFAMTLMFPPEIGVPWRCFYPKMKPGHLTDLRSVLVNNRAFAS 1260
Query: 689 SSVKHGLHKHILHASQELYKWINITVD-----SFERLSLESTFGWESETSFPKALGDIIE 743
+V H++++ S L VD ER LE PK LGD++E
Sbjct: 1261 VAVDRSFHEYLICDSDALSAATKKFVDFVRTPKSERRLLEG-------PKCPKVLGDLVE 1313
Query: 744 SLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPR 803
S GAI +D+G + +++ + L+P+ + +++ P REL E CQ H++ + A +
Sbjct: 1314 SSVGAILLDTGFDLNHIWKIMLSFLDPISSFSNLQINPVRELKELCQSHNWDF-EVPASK 1372
Query: 804 INGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+V V + + ++++K+ A ++AS+++ LK
Sbjct: 1373 KGRTFSVDVTLSGKDMNISASASNSNKKEAIRMASEKIYARLK 1415
>gi|302764440|ref|XP_002965641.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
gi|300166455|gb|EFJ33061.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
Length = 524
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 245/453 (54%), Gaps = 40/453 (8%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
+P + +R++ ++ A+ L+ + N IP SK+LEA+T C E + E +E LGD+
Sbjct: 15 LPHLRNRVERMMQAIQLRKAI------NYNIPASKILEALTAANCHEPYCYERIELLGDA 68
Query: 462 FLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMI 521
+LK+A S +L+ + + EG L++ + +IISN+AL L + L ++R PF +
Sbjct: 69 YLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLETYVRINPF------V 122
Query: 522 PGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
PG T +++ SK +A+VVEALIGA+ G+ ++
Sbjct: 123 PGREP------------------TDLQELSSKVLANVVEALIGAYYVHHGDKGARHVVEW 164
Query: 582 IGIKVDFVNVPYE--RQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
+GI+ F + + R V + ++N LE+ L YSFR +LL +ALTH S
Sbjct: 165 LGIETGFSDAELQIARAGSVVSPEVLNSIDFEGLENTLGYSFRSRNLLAQALTHSSSRQA 224
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
+ Y+RLEF+GDAVLD+L+T ++Y Y L PG LTD+R A++N++ +A + VKH LH
Sbjct: 225 SMVPIYERLEFIGDAVLDHLLTRHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLH 284
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWE-SETSFPKALGDIIESLSGAIFVDSGC 755
HILH S + + I + + + + PK LGD+ +SL GA+++DSG
Sbjct: 285 AHILHESNDFHSQIKTYAKHALNMEENAIYSYGFGAVKAPKVLGDVFQSLVGAVYIDSGL 344
Query: 756 NKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVH 815
N + V++ PLL+P++TPE + + P REL E C KH ++ + ++G + +
Sbjct: 345 NLDQVWKVFEPLLQPLVTPEAVPIHPVRELYELCDKHLKKLEWDYS--LSGDLFLARALV 402
Query: 816 ANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
N L + T + K+ AKK+A+ + L S
Sbjct: 403 GNKVLGRGT--NVQKKMAKKLAAINAIAKLDKS 433
>gi|414879098|tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 595
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 210/377 (55%), Gaps = 24/377 (6%)
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
+TT +C E F +E LE LGDS LKYA S LF T+ N HEG LS ++ I NA L +LG
Sbjct: 1 MTTLRCCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLYRLG 60
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGD------------NSGSYELNDHSLFNERKIYV---- 544
+ ++ G+IR FDP+ W+ PG NS + H + +++ I +
Sbjct: 61 IERRIQGYIRDAAFDPRRWLAPGQLSRRPCPCECPVNSEVVTEDIHRI-DDKSIIIGKAC 119
Query: 545 -TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER 603
G + + SKT++D VEALIGA+ GG L I+ + + R
Sbjct: 120 DKGHRWICSKTISDCVEALIGAYYVEGGLKAAFAVLKWFQIETEIEEELIMEALSSASVR 179
Query: 604 -----LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
+ V LE+ L Y+F+ LL+EALTH S CYQRLEFLGDAVLD LIT
Sbjct: 180 NYLPKVDVVELLEAKLGYTFQMKGLLIEALTHSSQQESGATYCYQRLEFLGDAVLDILIT 239
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE 718
+L+ + G+LTD+RSASVNN+ +A +VKH LH+ + H+S L I V+S E
Sbjct: 240 RHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYVNSLE 299
Query: 719 RLSLE-STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM 777
S++ ++ PK LGDI+ES++GAI +DS + ++V+ +PLL P++TPE +
Sbjct: 300 SSSMDRASLLSSGPCRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFKPLLSPIVTPENL 359
Query: 778 RLQPARELNEYCQKHHF 794
L RELNE+ K+ +
Sbjct: 360 ELPRFRELNEWSDKNGY 376
>gi|302815180|ref|XP_002989272.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
gi|300143015|gb|EFJ09710.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
Length = 524
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 244/454 (53%), Gaps = 42/454 (9%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
+P + +R++ ++ A+ L+ + N IP SK+LEA+T C E + E +E LGD+
Sbjct: 15 LPHLRNRVERMMQAIQLRKAI------NYNIPASKILEALTAANCHEPYCYERIELLGDA 68
Query: 462 FLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMI 521
+LK+A S +L+ + + EG L++ + +IISN+AL L + L ++R PF +
Sbjct: 69 YLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLETYVRINPF------V 122
Query: 522 PGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
PG T +++ SK +A+VVEALIGA+ G+ ++
Sbjct: 123 PGREP------------------TDLQELSSKVLANVVEALIGAYYVHHGDKGARHVVEW 164
Query: 582 IGIKVDFVNVPYE--RQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
+GI+ F + + R V + ++N LE+ L YSF +LL +ALTH S
Sbjct: 165 LGIETGFSDAELQIARAGSVVSPEVLNSIDFEGLENTLGYSFGSRNLLAQALTHSSSRQA 224
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
+ Y+RLEF+GDAVLD+L+T ++Y Y L PG LTD+R A++N++ +A + VKH LH
Sbjct: 225 SMVPIYERLEFIGDAVLDHLLTRHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLH 284
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWE-SETSFPKALGDIIESLSGAIFVDSGC 755
HILH S + + I + + + + PK LGD+ +SL GA+++DSG
Sbjct: 285 AHILHESNDFHSQIKTYAKHALNMEENAIYSYGFGAVKAPKVLGDVFQSLVGALYIDSGL 344
Query: 756 NKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAP-RINGKAAVTVEV 814
N + V++ PLL+P++TPE + + P REL E C KH MKK ++G + +
Sbjct: 345 NLDQVWKVFEPLLQPLVTPEAVPIHPVRELYELCDKH---MKKLEWDYSLSGDLFLARAL 401
Query: 815 HANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
N L + T + K+ AKK+A+ + L S
Sbjct: 402 VGNKVLGRGT--NVQKKMAKKLAAINAIAKLDKS 433
>gi|297610684|ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group]
gi|18087887|gb|AAL59041.1|AC087182_24 putative RNA helicase [Oryza sativa Japonica Group]
gi|31432753|gb|AAP54346.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|255679506|dbj|BAF26812.2| Os10g0485600 [Oryza sativa Japonica Group]
Length = 1458
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 205/377 (54%), Gaps = 25/377 (6%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + NA L
Sbjct: 912 ILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATL 971
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGD--------NSG----------SYELNDHSLFN 538
K G L G++R FDP+ W+ PG N G Y +D S F
Sbjct: 972 HKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFFV 1031
Query: 539 ERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPY 593
+ G + + SKT++D VEAL+GA+ GG L + GI + V +
Sbjct: 1032 GKPCD-RGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKF 1090
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
++ ++ LE+ L Y+F LL+EA+TH S + CYQRLEFLGD+VL
Sbjct: 1091 NASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVL 1150
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D L+T +LY + + PG+LTD+RSA V+N+ +A + V++ +H H+ H S L + I
Sbjct: 1151 DLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEY 1210
Query: 714 VDS-FERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
V S E ES F + PK LGDI+ES++GA+F+D+ N ++V+E PLL P+I
Sbjct: 1211 VRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPLI 1270
Query: 773 TPETMRLQPARELNEYC 789
TP+ + L P REL E C
Sbjct: 1271 TPDKLALPPYRELLELC 1287
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 132/334 (39%), Gaps = 49/334 (14%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RYF P P F++ E G+ CTL LP N Q+++ + KQ LEACKKLHQ+G
Sbjct: 551 RYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLG 610
Query: 87 ALTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTK-ITYH 136
L D+L+P +E G H L D++ IT +
Sbjct: 611 ELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLN 670
Query: 137 CYLIEL---KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQ 192
Y I+ ++ NY VL + EL+ ++ DL + ++ + GK+Q
Sbjct: 671 TYRIDFLCDQEGENY----AGFVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQ 726
Query: 193 LTPDKVLLCRRFQIALFRVIMD---HNLDKLNE-----ILKGLWLRDNLEIDYLLLPASE 244
L ++ + FQ F I H K KG ++ N E YLLLP +
Sbjct: 727 LNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRD 786
Query: 245 Q-------SIDWEPVASLSFPCDIGLKHHK--------NC----STMSNARVVQTKSGPL 285
SI WE + S + + ++ NC ++ + L
Sbjct: 787 SSYIQDDLSIHWEAIESCAGAVEQLWSSYQGDENVIPVNCIPQKRRGGQEEIIHLANKSL 846
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLF 319
I +SVV + H+G+IY + ++ A F
Sbjct: 847 HCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSF 880
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS++QSRGRAR NS+++LM++R
Sbjct: 450 FDLPRTVCSYVQSRGRARRNNSEFILMIER 479
>gi|218184775|gb|EEC67202.1| hypothetical protein OsI_34085 [Oryza sativa Indica Group]
Length = 1093
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 203/376 (53%), Gaps = 23/376 (6%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + NA L
Sbjct: 535 ILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATL 594
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGD--------NSG---------SYELNDHSLFNE 539
K G L G++R FDP+ W+ PG N G + D F
Sbjct: 595 HKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFVV 654
Query: 540 RKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPYE 594
K G + + SKT++D VEAL+GA+ GG L + GI + V +
Sbjct: 655 GKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFN 714
Query: 595 RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 654
++ ++ LE+ L Y+F LL+EA+TH S + CYQRLEFLGD+VLD
Sbjct: 715 ASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLD 774
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
L+T +LY + + PG+LTD+RSA V+N+ +A + V++ +H H+ H S L + I V
Sbjct: 775 LLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYV 834
Query: 715 DS-FERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
S E ES F + PK LGDI+ES++GA+F+D+ N ++V+E PLL P+IT
Sbjct: 835 RSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFLDTDFNVDMVWEIFEPLLSPLIT 894
Query: 774 PETMRLQPARELNEYC 789
P+ + L P REL E C
Sbjct: 895 PDKLALPPYRELLELC 910
>gi|357140713|ref|XP_003571908.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3b-like [Brachypodium distachyon]
Length = 1414
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 203/377 (53%), Gaps = 25/377 (6%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + NA L
Sbjct: 890 ILEAITTLRCCETFSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNAKL 949
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNS------------------GSYELNDHSLFN 538
K G L G+IR FDP+ W+ PG S G Y +D S F
Sbjct: 950 HKHGVWRSLQGYIRDSAFDPRRWVAPGQISLRPFPCNCGIETSFVPTNGMYIRDDPS-FV 1008
Query: 539 ERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPY 593
K G + + SKT++D VEAL+GA+ GG L + GI++ V
Sbjct: 1009 VGKPCDKGHRWMCSKTISDCVEALVGAYYVGGGIIAALWVMRWFGIEIKCDRKLVQEVKL 1068
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+ + ++ LE L Y+F LL+EA+TH S + CYQRLEFLGD VL
Sbjct: 1069 NASYICYLPKTNDIDELEVKLKYNFSVKGLLLEAITHPSAQESGVDYCYQRLEFLGDCVL 1128
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D LIT YLY + + PG+LTD+RSA V+N+ +A + V++ +H H+ H S L + I
Sbjct: 1129 DLLITQYLYVTHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGVLLEQITEY 1188
Query: 714 VD-SFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
V + E E+ F S PK LGDI+ES++GAIF+D+ N ++++ + PLL PMI
Sbjct: 1189 VRFNLECQGKENEFLQHSTCKVPKVLGDIMESIAGAIFIDTDFNVDLLWNIVEPLLSPMI 1248
Query: 773 TPETMRLQPARELNEYC 789
TPE + L P REL E C
Sbjct: 1249 TPENLALPPYRELLELC 1265
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 133/338 (39%), Gaps = 59/338 (17%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVI----AQGNIKTLKQTACLEACKKLHQ 84
RY+ P P +++ E G CTL LP N Q +I + GN+ KQ LEACKKLHQ
Sbjct: 531 RYYMPKPSYEMAVEDGSYQCTLILPPNAAFQRIIGPSCSTGNLA--KQLVSLEACKKLHQ 588
Query: 85 IGALTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTK-IT 134
+G L D+L+P + E G H L +++ ++
Sbjct: 589 LGELDDHLVPLTEGPMDIGNSRTNEKCISGPGTTKRKELHGTTSVLALTGTWTHESENVS 648
Query: 135 YHCYLIELK---QNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
+ Y + + + NY VL + + L+ ++ DL + ++ + GK
Sbjct: 649 LNAYRFDFRCDQEGENY----AGFVLLMESALDDDVACSKMDLFLIPNKMVYTTITPCGK 704
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNL--DKLNEILKGLWLRDNLEID------YLLLP- 241
IQL ++ + FQ F I + + + + R EI YLLLP
Sbjct: 705 IQLNKKQLREGKLFQEFFFNGIFGRLFHGSRTSGVQREFIFRKGYEIQWSSESMYLLLPL 764
Query: 242 ------ASEQSIDWEPVASLSFPCDIGLKHHKN--------------CSTMSNARVVQTK 281
+ SI+WE + C L+ +N C ++ ++
Sbjct: 765 CYSSHIQHDLSINWEAIGF----CTDALEQLRNMYTEDGNLHANFIQCRSIKGEDMIHMA 820
Query: 282 SGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLF 319
+ L I +SVV + H+G+IY + ++ A F
Sbjct: 821 NKSLRVSSIKDSVVLSLHTGRIYSVLDLIIDTTAEDSF 858
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV S++QSRGRAR +S+Y+LM++R
Sbjct: 430 FDLPRTVSSYVQSRGRARKSSSNYVLMIER 459
>gi|378405592|gb|AFB82635.1| dicer-2 [Marsupenaeus japonicus]
Length = 1502
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 232/890 (26%), Positives = 381/890 (42%), Gaps = 178/890 (20%)
Query: 40 DINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQTACLEACKKLHQIGALTDNLLPDV 96
++ + M + LP P++ +I N K++A L+ C KLH++G L NL P
Sbjct: 574 EVKEGMTTVGIRLPIMAPLKDMIYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLRPKE 633
Query: 97 VVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYH----CYLIELKQNFNYDIPA 152
D+ G E P+ PE ++ + H CY + +Y + +
Sbjct: 634 --SNDDSLVEGLVDLPPEEPV---PEGTSESGTRKRRRVHAKDLCYPFSNEHGGSYCLYS 688
Query: 153 HDIV------LAVRTELESEIKKVNFDLE------------VDRGRLTVNLKHLGKIQLT 194
DI +V + + I K+ F + G + VN++ +G +
Sbjct: 689 IDIKPFGQSGESVTIDSSTCISKIGFICKEGLVSSPFPLFFSKWGDVMVNVREVGPLT-D 747
Query: 195 PDKVLLCRRFQIALFRVIMDHNLDKLNEIL------KGLWLRDNLEIDYLLLPASEQSID 248
D L + I F ++ N+ +LNE L K W D ++P +D
Sbjct: 748 LDTSLFDK---IKKFHRLVFENIIELNENLMSFDPEKSKW-------DVFIVP-----LD 792
Query: 249 WEPVASLSFPCDI----GLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSG--- 301
+ + L+ +I +K S N + V++K + + P G
Sbjct: 793 FSEIIDLNMLNEIYSFDSIKPVMIKSHNQNTKFVRSK---------FEDALIYPQYGIPS 843
Query: 302 -QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNY 360
Q+YY++ + LN + F G +Y++++ ERYG++L + LL + I NY
Sbjct: 844 NQMYYVSHIFDELNPCNTFPEGLKGYESYERYFLERYGLELKDKNQPLLEAKHIPKELNY 903
Query: 361 LSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSL-------- 412
L K ++ + + + PE C +I P+ S ++ +PSI HRL S
Sbjct: 904 LKKIPKKAREKKGNLVPRFVPEFCGLI--PIKASLWWQIMCMPSIFHRLNSFNLMHEFIV 961
Query: 413 ---LLAVNLKNMLLDHCMQNV-----------TIPTS------------KVLEAITTKKC 446
+ + +KN +LD T+P +L A T K+
Sbjct: 962 KTKITSPAIKNEVLDFSWTKKFIYELLGSSENTVPRFLDRKKQEYIHPFSMLHAFTLKEA 1021
Query: 447 QEG--FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
E F+LE LE LGDSFLK+ + LF +++HEG LS + + + N L +L C
Sbjct: 1022 SEDKEFNLERLELLGDSFLKFVTGEALFLRDESYHEGRLSQSRGKRVCNKTLFRLACQKG 1081
Query: 505 LPGFIRTEPFDPK--------------------------MW-MIP------GD-NSGSYE 530
L G I + +PK W +P GD +
Sbjct: 1082 LEGKIAAKVLNPKKNGSIPGFRIKPEFEESLRSLEVPHDFWHQVPNTVKDVGDLKEAVFA 1141
Query: 531 LNDHSLFNERKIYVTG-------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
L + K G +V K++AD VEA+IGA+L G FL +G
Sbjct: 1142 LMSDDASKDEKAEKKGSCYNPWTEHEVSDKSIADCVEAIIGAYLRVCGNEAAAAFLHWLG 1201
Query: 584 IKVDFVNVPYERQFQVQAERLVN--------------VRHLESLLNYSFRDPSLLVEALT 629
+ V N V+ R+ + LE + Y+FRD S +V+A+T
Sbjct: 1202 VGVFRDNSLLMEPKTVRTARVRKECAQDLTIFYKKAVLDRLEKKIGYTFRDRSFIVQAVT 1261
Query: 630 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
H SY+ ++ CYQRLEFLGDAVLDYL+T +++ ++ SPG L+D+RS V ND +
Sbjct: 1262 HSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYSPGQLSDLRSYFVKNDTLGRA 1321
Query: 690 SVKHGLHKHILHASQELYKWINITVDSF----------ERLSLESTFGWESETSFPKALG 739
+ K LH+H+LH + +L ++D F E L+ E + PKALG
Sbjct: 1322 AAKGKLHQHLLHINPKL----EASIDKFLSILHQDPLGEELNTEDDVQDCEDVEIPKALG 1377
Query: 740 DIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP--ETMRLQPARELNE 787
D++E++ GA+++DS + +V ++ I +LE ++ +T++L P R+L E
Sbjct: 1378 DMVEAIIGAVYLDSNRSLKVAWQVIERILEDLLNTSIQTIQLNPIRQLLE 1427
>gi|379987680|gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
Length = 596
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/383 (37%), Positives = 210/383 (54%), Gaps = 43/383 (11%)
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
+C E F +E LE LGDS LKYA S LF Y HEG LS ++ +SN+ L K+G
Sbjct: 3 RCNESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSDQRSWAVSNSTLHKVGTSRH 62
Query: 505 LPGFIRTEPFDPKMWMIPGD------------NSGSYELNDHSLFNERKIYVT-----GR 547
L G+IR FDP+ W PG + L+ L + K+ V G
Sbjct: 63 LQGYIRDGAFDPRRWTAPGQLSLRLCPCDHGVETSEVPLDKKFLTEDPKVVVGKHCDRGH 122
Query: 548 KKVKSKTV-ADVVEALIGAFLSTGGENVGLIFLDRIGIKV--------DFVNVPYERQFQ 598
+ + SKT+ +D VEALIGA+ GG L + +G++ D + + +
Sbjct: 123 RWMGSKTIISDCVEALIGAYYVGGGFIAALKLMKWLGVEAELEPSLVEDAIKTAFLYSYT 182
Query: 599 VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
+A+ ++ LE L+Y F LL+EA+TH + + ++ YQRLEFLGD+VLD LIT
Sbjct: 183 PKAK---DIEDLELKLSYKFSVKGLLLEAITHATVLEVDVSYNYQRLEFLGDSVLDILIT 239
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS----QELYKWINITV 714
YLY K+ + PG+LTD+RSASVNND +A ++VK LH H+ H S E+ ++ +
Sbjct: 240 WYLYQKHKDIDPGELTDLRSASVNNDNFAYAAVKRELHVHLQHHSGYLESEISAFVKLVS 299
Query: 715 DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
DS SL+ PK LGD++ES++GAI VD+ N + V++ ++PLL P++TP
Sbjct: 300 DS---CSLQG-------NKAPKVLGDLVESIAGAILVDTKLNLDEVWKIVKPLLSPIVTP 349
Query: 775 ETMRLQPARELNEYCQKHHFSMK 797
+ + L P REL E C + +K
Sbjct: 350 DKLELPPLRELIELCDSLGYFLK 372
>gi|328905041|gb|AEB54796.1| dicer 2 [Litopenaeus vannamei]
Length = 1502
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 231/890 (25%), Positives = 381/890 (42%), Gaps = 178/890 (20%)
Query: 40 DINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQTACLEACKKLHQIGALTDNLLPDV 96
++ + M + LP P++ +I N K++A L+ C KLH++G L NL P
Sbjct: 574 EVKEGMTTVGIRLPIMAPLKDMIYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLRPKE 633
Query: 97 VVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYH----CYLIELKQNFNYDIPA 152
D+ G E P+ PE ++ + H CY + +Y + +
Sbjct: 634 --SNDDSLVEGLVDLPPEEPV---PEGTSESGTRKRRRVHAKDLCYPFSNEHGGSYCLYS 688
Query: 153 HDIV------LAVRTELESEIKKVNFDLE------------VDRGRLTVNLKHLGKIQLT 194
DI +V + + I K+ F + G + VN++ +G +
Sbjct: 689 IDIKPFGQSGESVTIDSSTCISKIGFICKEGLVSSPFPLFFSKWGDVMVNVREVGPLT-D 747
Query: 195 PDKVLLCRRFQIALFRVIMDHNLDKLNEIL------KGLWLRDNLEIDYLLLPASEQSID 248
D L + I F ++ NL +LNE L K W D ++P +D
Sbjct: 748 LDTSLFDK---IKKFHRLVFENLIELNENLMSFDPEKSKW-------DVFIVP-----LD 792
Query: 249 WEPVASLSFPCDI----GLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSG--- 301
+ + L+ +I +K S N + V++K + + P G
Sbjct: 793 FSEIIDLNMLNEIYSFDSIKPVMLKSHNQNTKFVRSK---------FEDALIYPQYGIPS 843
Query: 302 -QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNY 360
Q+YY++ + LN + F G +Y++++ ERYG+++ + LL + I NY
Sbjct: 844 NQMYYVSHIFDELNPCNTFPEGKKGYESYERYFLERYGLEIKDKNQPLLEAKHIPKELNY 903
Query: 361 LSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSL-------- 412
L K ++ + + + PE C +I P+ S ++ +PSI HRL S
Sbjct: 904 LKKIPKKAKEKKGNLVPRFVPEFCGLI--PIKASLWWQIMCMPSIFHRLNSFNLMHEFIV 961
Query: 413 ---LLAVNLKNMLLDHCMQNV-----------TIPTS------------KVLEAITTKKC 446
+ + +KN +LD T+P +L A T K+
Sbjct: 962 KTKITSPAIKNEVLDFSWTKKFIYELLGSSENTVPIFLDRKKQEYIHPFSMLHAFTLKEA 1021
Query: 447 QEG--FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
E F+LE LE LGDSFLK+ + LF +++HEG LS + +++ N L +L C
Sbjct: 1022 SEDKEFNLERLELLGDSFLKFVTGEALFLRDESYHEGRLSQSRGKLVCNKTLFRLACQKG 1081
Query: 505 LPGFIRTEPFDPK--------------------------MW-MIP------GD-NSGSYE 530
L G I + +PK W +P GD +
Sbjct: 1082 LEGKIAAKVLNPKKNGSIPGFRIKPEFEESLRSLEVPHDFWHQVPNTVKDVGDLKEAVFA 1141
Query: 531 LNDHSLFNERKIYVTG-------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
L + K G +V K++AD VEA+IGA+L G FL +G
Sbjct: 1142 LMSDDASKDEKAEKKGSCYNPWTEHEVSDKSIADCVEAIIGAYLLVCGNEAAAAFLHWLG 1201
Query: 584 IKVDFVNVPYERQFQVQAERLVN--------------VRHLESLLNYSFRDPSLLVEALT 629
+ V N V+ R+ + LE + Y+FRD S +V+A+T
Sbjct: 1202 VGVFRDNSLLMEPKTVRTARVRKECAQDLTIFYKKAVLDRLEKKIGYTFRDRSFIVQAVT 1261
Query: 630 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
H SY+ ++ CYQRLEFLGDAVLDYL+T +++ ++ SPG L+D+RS V ND +
Sbjct: 1262 HSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYSPGQLSDLRSYFVKNDTLGRA 1321
Query: 690 SVKHGLHKHILHASQELYKWINITVDSF----------ERLSLESTFGWESETSFPKALG 739
+ K LH+H+LH + +L ++D F E L+ E + PKALG
Sbjct: 1322 AAKGKLHQHLLHLNPKL----EASIDKFLSILHQDPLGEELNTEDDVQDCEDVEIPKALG 1377
Query: 740 DIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP--ETMRLQPARELNE 787
D++E++ GA+++DS + +V ++ I +L ++ +T++L P R+L E
Sbjct: 1378 DMVEAIIGAVYLDSNRSLKVAWQVIERILGDLLNTSIQTIQLNPIRQLLE 1427
>gi|115478498|ref|NP_001062844.1| Os09g0315100 [Oryza sativa Japonica Group]
gi|113631077|dbj|BAF24758.1| Os09g0315100, partial [Oryza sativa Japonica Group]
Length = 245
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 152/232 (65%), Gaps = 7/232 (3%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
++LEA+TTKKCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +ISNAA
Sbjct: 17 QILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAA 76
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIPG---DNSGSYELNDHSLFNERKIYVTGRKKVKS 552
LC+L C L G+I E F+P+ W+IP D G+ ++ S +Y + +KS
Sbjct: 77 LCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI---SFLAPNGMYSQRKMSIKS 133
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLE 611
K +AD VEALIGA+LST GE + + +G+ ++F +P ER+ ++AE ++VR LE
Sbjct: 134 KRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFIDVRSLE 193
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
+L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+
Sbjct: 194 GMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYS 245
>gi|168046558|ref|XP_001775740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672892|gb|EDQ59423.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 792
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 200/732 (27%), Positives = 348/732 (47%), Gaps = 66/732 (9%)
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDR-GRLTVNLKHLGKIQLTPDKVLLCRRFQIALFR 210
A + +L L+ E+ ++ L + + L + G + ++P+KV ++F I LF
Sbjct: 75 ASEFLLLSPQLLDEEVSSISVHLNLPAFAAVDSKLNYCGVLNVSPEKVETVKKFNIWLFH 134
Query: 211 VIMDH--NLDKLN-EILKGLWLRDNLEIDYLLLPASEQSIDWEPV-----ASLSF----P 258
+ M L K++ E K ++ I +P+ E+ +DW V +SL + P
Sbjct: 135 LAMGKCFALPKVSGEGKKNYYVLPCKPITGDTVPSPEELVDWHVVEIAITSSLLYRRKVP 194
Query: 259 CDIGLKHHKNCSTMSNARV----VQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLN 314
G +T SN + ++ ++G + ++VV ++G +++G+L L+
Sbjct: 195 FFGGYATLDCQNTQSNEALDGGGLRMRNGIFQEHDLEDAVVTCANNGLPCFVSGILHDLS 254
Query: 315 ANSLFTRNDG-GAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPS 373
+S +++ G I+Y +Y +L + + LL G R+ A NY+ + +
Sbjct: 255 GSSFCSQSAGRKQISYSDYYFHECKYKLEYPDQPLLKGYRLVRAGNYVRRTSAVSNGDSV 314
Query: 374 KI--SFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
K + ELPPE+C + +G + +PSI+H L+ L+A L+N N+
Sbjct: 315 KPWETMELPPEVCILHVG-LKGKLCRGGMRLPSILHSLEMSLVAAELRN--------NIG 365
Query: 432 IPTS--KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDR 489
P S KV EA+T+ C+ E+LE LGDS L + ++ + + LL +
Sbjct: 366 SPLSCFKVQEALTSGACEGNHSYETLELLGDSVLNFIGGVHMYIDFPSCTSELLHSYRHD 425
Query: 490 IISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKK 549
++SN L K G LPG+I E + K W+ PG +L S +
Sbjct: 426 LVSNRNLYKCGLACGLPGYIFAELLNTKTWVPPG--PALEDLPQKS---------PDGQV 474
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-NVPYERQFQVQAERLVNVR 608
+ KT+ADVVEALIG G N + + + + + F +P +Q L+ R
Sbjct: 475 IGLKTLADVVEALIGVTFLHGDLNSAVKTMVWLQVPIPFPEKIPEVIIADIQ--ELMEAR 532
Query: 609 H---------LESLLNYSFRDPSLLVEALTHG---SYMLPEIPRC---YQRLEFLGDAVL 653
+ LE + Y F+ SLL+ A +G ++ +PR +QRLEFLGD+VL
Sbjct: 533 NTFKDHDIVTLEKKIGYQFKCKSLLLSAFDYGDEVTFTQSGVPRGSFQFQRLEFLGDSVL 592
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LI + Y +P L D+R A+VN++ +A ++++HG H ++ S L I +
Sbjct: 593 DFLIMRHFVQLYSAFNPEQLNDLRQATVNSENFACTAIRHGFHHYLKRMSPILRDEIELY 652
Query: 714 VDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
S R S FG S S PKA+GD++++L+G+I +DS + ++V++ ++PLL P+ T
Sbjct: 653 AASVHREG-GSPFGIPSRAS-PKAIGDLMQTLAGSILLDSNFDHDLVWKVLKPLLSPLAT 710
Query: 774 PETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETA 833
P+T+ P R L C K ++ I + AV V+ N ++ + A
Sbjct: 711 PKTVMRHPRRLLEALCHKQDLKLELQT---IQLEGAVEARVYINQICVANSK-HYEPTVA 766
Query: 834 KKVASKEVLKSL 845
+++A+ +SL
Sbjct: 767 RRLAAFTAFRSL 778
>gi|41469334|gb|AAS07190.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 538
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 199/345 (57%), Gaps = 12/345 (3%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YF P P+FDI+K G CTL+LP + P+QTV +G LK+T CL+AC++LH IGALTD+
Sbjct: 192 YFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDS 251
Query: 92 LLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TYHCYLIELKQNFN 147
LLP++ V EE D E P YFP E V+ +++ Y+CY I L+
Sbjct: 252 LLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPK 307
Query: 148 YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIA 207
P DI+LA++ +L S+ +F L + +V +K++G I L ++V++ RRFQ
Sbjct: 308 TASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTT 366
Query: 208 LFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPC-DIGLKH 265
+ +I D +L+ N I ++ + + YLLLP IDW + S P + KH
Sbjct: 367 ILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANNKH 426
Query: 266 HKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGG 325
+C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L L+ANS ++DG
Sbjct: 427 MTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-LDANSCLPQHDGT 485
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQR 370
+TYK +++ R+G+ L F+ + LL G + +N+L C +K++
Sbjct: 486 VVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCYSKKEK 530
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 89 FDPSATVCSFIQSRGRARMENSDYLLLVGR 118
>gi|313236326|emb|CBY11646.1| unnamed protein product [Oikopleura dioica]
Length = 1519
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 233/893 (26%), Positives = 383/893 (42%), Gaps = 182/893 (20%)
Query: 49 TLYLPNNCPIQTVIAQGNIKTL---KQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
+L LPNN ++ ++ +T K++A LEAC KL +G L D L +E D K
Sbjct: 654 SLVLPNNSHLRGIVVGHPKETAELSKRSAALEACTKLRILGELDDFLFNSS--KEMDKYK 711
Query: 106 HGNEPY--------------------DAEHPIYFPPELVNQCPQDTKIT---------YH 136
+P+ ++P + P L + P+D+K
Sbjct: 712 FEIDPFPNPLSRKRKPPPGMEGGPKRRQKYPRHIPRSLRAK-PKDSKAEGASALPVPEKE 770
Query: 137 CYLIELKQNFNYDI---PAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
CY+ + + + + P H V T+LE IK + + D R+ + G +Q
Sbjct: 771 CYVYRISMFYRHGVNLEPIHQQVCFSATQLEI-IKSFHQYIIQDVIRIE---RPGGVVQF 826
Query: 194 TPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPAS-----EQSID 248
PDK + YL+ P E ID
Sbjct: 827 NPDKS-----------------------------------PVPYLIAPVDCDNGIEWEID 851
Query: 249 W----EPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIY 304
W E +A + + + + + KS + +I + + +
Sbjct: 852 WDYLTESIAGRVLAKEAAEAERRVNTYSEDDPFIFHKSEYEDSVVICSYRRHDAPTQNRF 911
Query: 305 YITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN------------GR 352
Y+ + ++ +S F +D +++++Y +R+ + L +++ LL+ R
Sbjct: 912 YVAEIQYDMDPDSPFPADDYE--SFRQYYMQRWALCLTNEKQPLLDVDHTDCRLNLLTPR 969
Query: 353 RIFHAQNYLSKCRQEKQREPSKISFE---LPPELCRIIMGPMSLSTFYSFTFVPSIMHRL 409
+ L EK+R+ + L PE+ + P+S S + +PSI+HR+
Sbjct: 970 FVTQKGRALPASALEKKRQKYEDKANRQYLIPEILDV--HPVSASLWRKAVCLPSILHRI 1027
Query: 410 QSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQ 469
LL A +L+ + + ++L+ +T K +GF+LE LE LGD FLKY+ +
Sbjct: 1028 TCLLAAEDLRRRI------SRQTRVDQILQTLTLSKSSDGFNLERLEMLGDCFLKYSVTV 1081
Query: 470 QLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPF----DPKMWMIPGDN 525
L+ Y++ HEG LS + + +SN L +LG + +PG + E F W+ PG
Sbjct: 1082 YLYCKYEHQHEGQLSFFRSKKVSNRNLFRLGVYNDIPGRMVAEQFMQNDTGGNWLPPG-- 1139
Query: 526 SGSYELNDHSLFNERKIYV-TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI 584
Y DH+ + IY + + K++AD +EALIGA+L G FL +G+
Sbjct: 1140 ---YFNKDHAALEKPLIYNHYSDQYLTDKSIADCMEALIGAYLKATGIEATQQFLCYMGL 1196
Query: 585 KV--------------------DFVNVPYERQFQVQAERLVNVRHLESL----------L 614
V P+ + Q E++ ++ L+ L +
Sbjct: 1197 IVLPSSSCEPETGKPLPPFLLLAPPIEPFHLKSCTQLEKMQRLQALDKLTRTYGEFEKKI 1256
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT--LSPGD 672
Y+F++ L+++LTH SY ++ CYQRLEFLGDAVLD+LIT +L++ +PT SPG+
Sbjct: 1257 GYTFKNKGYLLQSLTHASYQYNQVTNCYQRLEFLGDAVLDFLITRHLFD-HPTKRFSPGE 1315
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-------------DSFER 719
LTD+R+A VNN+ +A +VK HK++ + +L+ I V +R
Sbjct: 1316 LTDLRAALVNNNIFAALAVKFDFHKYLYALTPDLHNVIRDYVLYCQTRQDVEGMEAVLKR 1375
Query: 720 LSLESTFGWESET-------SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
+ LE E PK LGDI ES++GAI++DSG N + V+ RP+L+ I
Sbjct: 1376 IRLEEEPEEEEGDHEDSEDIEVPKVLGDIYESVAGAIYLDSGMNLDAVWGVYRPMLQKYI 1435
Query: 773 TPETMR--LQPARELNEYCQKHHFSMKKTVAP--RINGKAAVTVEVHANGTLF 821
++ P REL E K AP R +GK VTV + N F
Sbjct: 1436 DKYSINPPRSPIRELLEL----EPETAKFSAPEKRADGKYRVTVHIANNKGRF 1484
>gi|241896736|emb|CAZ65730.1| dicer-2 protein [Mucor circinelloides f. lusitanicus]
Length = 1608
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 260/546 (47%), Gaps = 63/546 (11%)
Query: 276 RVVQTKSGPLCTCMIYNS----VVCTPHSGQIYYITGVLGHLNANSLFTRNDG------G 325
R++++ S P T Y+ VV + + Y++T V + + L DG G
Sbjct: 990 RIIESTSRPF-TLDDYDPTDSIVVDQSDNMRRYFVTNV--RTDMSPLSPVPDGVKIRETG 1046
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCR 385
++ +Y E+ ++ + +L +R+ N+L + + + +S P C+
Sbjct: 1047 YASFADYYNEKKFVEELDTSQPMLEVKRLKKVMNFLYPGKPSQAQMKGPMSTWTVPSFCQ 1106
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-----NVTIPTSKVLEA 440
MS S + + +PSIM R+ S+LL C Q ++ I + +LEA
Sbjct: 1107 RFF--MSASVYQATMMIPSIMTRIDSILL-----------CRQSAERYDLPIDDANMLEA 1153
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
TT + E LETLGDS LK+ A+ +L+ + +EG L + R+I N AL +
Sbjct: 1154 YTTPSANMEMNYERLETLGDSLLKFIATIRLYINFPFSNEGELHHLRIRVICNRALYRSA 1213
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
K ++ ++ F+ + W PG S + N+ I K+ KT+AD+VE
Sbjct: 1214 KRLKFYRYVTSQAFNRRYWRPPGFTSPAD--------NQETIDGLKYHKLSDKTLADIVE 1265
Query: 561 ALIGAFLSTGGENVGL-------IFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESL 613
A +GA + G GL I D I DF E + QV A VR L SL
Sbjct: 1266 ASLGAAYLSNGLEGGLHAAIQLQIPFDEIKTWDDFKPTFEESRKQVPAR--AEVRALRSL 1323
Query: 614 --------LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ F+ P L+VEALTH S P CYQRLEFLGDA+LD+++ YL+ +Y
Sbjct: 1324 DLPKVTEIVGREFKTPLLIVEALTHASLPNSTSP-CYQRLEFLGDAILDFMVIRYLFARY 1382
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL--E 723
P PG +TD++ + VNN + ++ GL++HI+H S +L + I V E E
Sbjct: 1383 PDADPGIITDLKDSCVNNHILGIVCIETGLYRHIIHYSGKLIRAIEFFVSEVEETKARGE 1442
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIR----PLLEPMITPETMRL 779
+ + + + PK L D++ES+ GA FVD+G E V E P+L +TPE ++
Sbjct: 1443 AVGEYWVDFNIPKVLSDVVESMLGATFVDAGFRLEAVEELFAKWFLPILNNHVTPELIKF 1502
Query: 780 QPAREL 785
P R+L
Sbjct: 1503 HPLRKL 1508
>gi|195996181|ref|XP_002107959.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
gi|190588735|gb|EDV28757.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
Length = 685
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 289/568 (50%), Gaps = 79/568 (13%)
Query: 290 IYNSVVCTPHSGQ---IYYITGVLGHLN-ANSLFTRNDGGAITYKKHYEERYGIQLCFDQ 345
I N + T + G Y + + H ++L+ ++ ITY Y+E+YGI +
Sbjct: 69 ILNDAIITRNYGNNPSYYEVAQICRHRTPVDNLWGESNLNFITY---YQEKYGIMIKNTT 125
Query: 346 ELLLNGRRIFHAQNYL-SKCRQEKQ----------------------REPSKISFELPPE 382
+ LL + + +N L S Q+ Q + SK+ EL PE
Sbjct: 126 QPLLRPKYLSKKRNMLRSNSGQKSQFSVKSCNKSQTQSVADTITHHSKGKSKV-IELIPE 184
Query: 383 LCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC----------MQNVTI 432
LC+ + P S+ + S + SI+ R++S+L +N + + +QN ++
Sbjct: 185 LCKRSIFPASV--WKSLACIRSILWRMESMLSVKEFENKMQESWIVGSSRNERQLQNNSL 242
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
T +L+A+T + + F+LE+LE LGDS+LKYA S F +Y HEG LS K +I+S
Sbjct: 243 -TMTILKALTLARANDDFNLETLEFLGDSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVS 301
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPK-MWMIPG-------DNSGSYE-LNDHSLFNERKIY 543
N L ++G LPG+I D +W+ PG D+ G E L+ +L +++
Sbjct: 302 NENLYQIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVH 361
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL-DRIGIKVDFVN---VPYERQFQV 599
T +K+K+K +ADV+EAL+G L GEN F+ + +GIKV ++ + +
Sbjct: 362 PT--QKLKNKCIADVMEALLGGILLELGENSANNFITNNLGIKVGRLSHNIAKLDDDARK 419
Query: 600 QAERLV---NVRHLESLLNYSFRDPSLLVEALTHGSY---MLPEIPRCYQRLEFLGDAVL 653
+ ++ N++ LE++L YSF+D LL+ ALTH +Y + E CYQRLEFLGDA+L
Sbjct: 420 EISKIYNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAIL 479
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN-- 711
Y++ + Y+ P DL D AS+ N+ A+ ++ +G+HK+ + S L+ IN
Sbjct: 480 QYIVVRHCYHANNNYKPADLHDFVEASLQNESLAVMTMVYGIHKYFFYNSPSLFSQINQL 539
Query: 712 -ITVDSFE----RLSLES-----TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
VD+ E RLS E + + PK LGD+ ESL GAIF+D G + EVV
Sbjct: 540 LQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESLIGAIFIDCGRSIEVVN 599
Query: 762 ESIRPLLEPM--ITPETMRLQPARELNE 787
+ + LL+P I + + P R L+E
Sbjct: 600 DLVLRLLQPQHAIFAQGVPKSPIRILHE 627
>gi|255646653|gb|ACU23800.1| unknown [Glycine max]
Length = 273
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 161/266 (60%), Gaps = 21/266 (7%)
Query: 109 EPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEI- 167
E + +P Y P E V+ + +TYHCYL+EL+Q++ Y + +DIVLA+R+EL+SEI
Sbjct: 2 EGFGNAYPSYVPSERVSCSSKGRNVTYHCYLMELEQHYEYQVSVNDIVLAIRSELDSEIV 61
Query: 168 ---KKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEIL 224
+FD V RG+L VNL+HL IQL+P+KV CRRFQ LFR++++ ++ KL +
Sbjct: 62 DTLSGTSFD--VKRGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVS 119
Query: 225 KGLWLRDNLEIDYLLLPA-------SEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARV 277
L DN EID+LLLPA S IDW+PV S+ F + C +A
Sbjct: 120 DDFSLGDNPEIDFLLLPATVKHQRPSNSIIDWKPVLSVPFSSE------STCDCKDHACN 173
Query: 278 VQTKSGPLCTCMIYNSVVCTPHSGQIY--YITGVLGHLNANSLFTRNDGGAITYKKHYEE 335
V+ ++ +C+C + N VV TPH+G IY Y T LN NS + G TYK+H+++
Sbjct: 174 VRIRNDSVCSCKLENCVVYTPHNGSIYIIYTTDGTKKLNGNSTLNQGLKGITTYKEHFKK 233
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYL 361
R+GI+L F+ + LL+GR +F +NYL
Sbjct: 234 RHGIELGFEHQSLLHGRNLFKVENYL 259
>gi|384500232|gb|EIE90723.1| hypothetical protein RO3G_15434 [Rhizopus delemar RA 99-880]
Length = 1239
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 253/513 (49%), Gaps = 55/513 (10%)
Query: 304 YYITGVLGHLNANSL----FTRNDGGAITYKKHYEERYGIQLCFDQEL-LLNGRRIFHAQ 358
Y IT V +N S F + G T+ +Y + + D E ++ R+
Sbjct: 650 YLITDVRYDMNPQSAVPSGFDIREAGYPTFIDYYRDLGDKFVIHDYEQPMIEVERLKRGM 709
Query: 359 NYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL 418
++L R + P+ C ++ S + + +PSIM R+ SLLL +
Sbjct: 710 DFLHPGGNMPARSKGPARTWVVPQFCTQYF--VNASVYIAMLMIPSIMTRIDSLLLCYDS 767
Query: 419 KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNH 478
+ ++ I +LEA T E LETLGDS LK+ A+ +L+ +
Sbjct: 768 R------ARYDLPITDEYMLEAYTMPSASMEMDYERLETLGDSLLKFIATIRLYINFPFS 821
Query: 479 HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIP-----GDNSGSYE-LN 532
+EG L + R++ N AL + K ++ ++ F+ + W P DN+ + E L
Sbjct: 822 NEGELHHLRIRVVCNRALYRAAKRLKFYRYVTSQAFNRRHWRPPHFTSTADNADTMESLK 881
Query: 533 DHSLFNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENV------GLIFLDRIGIK 585
H K+ KT+AD+VEA +GA +LS+G E I D+I
Sbjct: 882 KH--------------KLSDKTLADIVEASLGAAYLSSGLEGCLHTAIQMQIPFDQIEKW 927
Query: 586 VDFVNVPYER-------QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 638
DF NV +E + +V+A R++++ ++ L++ F P L+VEALTH S
Sbjct: 928 SDF-NVAFEESRKAVPPRAEVKALRMLDLPKIQVLVDREFNKPLLVVEALTHASLPNSTS 986
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P CYQRLEFLGDA+LD+L+ YLY KYP PG +T ++ + VNN + + +GLHKH
Sbjct: 987 P-CYQRLEFLGDAILDFLVIRYLYTKYPDAEPGQITTLKDSCVNNHVLGIICLNNGLHKH 1045
Query: 699 ILHASQELYKWINITVDSFERL--SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
I+H S +L + IN + + L + ++ + ++ + PK L D++ES+ GA+FVD+ +
Sbjct: 1046 IIHYSGKLVRAINTLEEEVQELKDTGKAVGEYWADMNIPKVLSDVVESMLGAVFVDAKFD 1105
Query: 757 KE---VVFES-IRPLLEPMITPETMRLQPAREL 785
+F+ P+ + +TPE +R+ P R+L
Sbjct: 1106 LSPCAALFDKWFVPIFDANVTPELVRIHPMRKL 1138
>gi|241061228|ref|XP_002408100.1| dicer-1, putative [Ixodes scapularis]
gi|215492369|gb|EEC02010.1| dicer-1, putative [Ixodes scapularis]
Length = 2050
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 235/496 (47%), Gaps = 90/496 (18%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ T+ + HEG LS + R ISN
Sbjct: 1551 SILLQALTMSNANDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLSHLRSRQISNL 1610
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPGD---------------NSGSYELNDHSLFN 538
L +LG +L G + F+P W+ PG +G + + +
Sbjct: 1611 NLYRLGRARRLGGLMVATKFEPSDNWLPPGYVVPPGLERALIESGLPAGHWNIGALAGLT 1670
Query: 539 E------RKIYVTGRKKVKS-----------------------------KTVADVVEALI 563
+ R+ RKKV++ K++AD VEALI
Sbjct: 1671 QMDEEEIRQTLAERRKKVRNLEEVLAEESGLDAAPYVPYNLLTQHSIPDKSIADCVEALI 1730
Query: 564 GAFLSTGGENVGLIFLDRIGIKV----------DFVNVPYERQFQ----------VQAER 603
GA+L + G L+F+ +G++V V+ P R + A+
Sbjct: 1731 GAYLVSCGPRATLLFMSWLGLEVLPRDRTAEALRDVSAPLYRTLESPLVSPDDGSALAQL 1790
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
L E+ + Y FRD + L++A TH SY + CYQRLEFLGDAVLDYLIT +LY+
Sbjct: 1791 LSGYDAFEARIGYRFRDRAYLLQAFTHASYHYNRLTDCYQRLEFLGDAVLDYLITRHLYD 1850
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV------DSF 717
SPG LTD+RSA VNN +A +VK+ H++ + S L+ I V D F
Sbjct: 1851 DPQRHSPGTLTDLRSALVNNTFFASLAVKYDFHRYFKNVSPGLFAVIQRFVETKCHSDGF 1910
Query: 718 ---ERLSL-ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
E+ L E E PKALGDI ES++GAIF+DS + + V+ +++P I
Sbjct: 1911 RYHEKYYLEEEECEEAEEVEVPKALGDIFESVAGAIFLDSNMSLDTVWRVYYAMMKPEIE 1970
Query: 774 PETMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E Q F + +NGK + VEV G + +K
Sbjct: 1971 YFSTHVPKSPIRELLELEPQTAKFERAEMT---LNGKVRIRVEVFGKG---RFVGVGRNK 2024
Query: 831 ETAKKVASKEVLKSLK 846
AK A+K L++LK
Sbjct: 2025 RIAKCTAAKRALRALK 2040
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYL 361
Q +Y+ + LN S F D G T+ +Y E+Y I++ ++ LL+ N L
Sbjct: 1052 QFFYVAEICHDLNPKSDFP--DAGFETFDAYYREKYDIRVVDGRQPLLDVDHTSARLNLL 1109
Query: 362 ---------------SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIM 406
S+ + +RE + L PELC ++ P S + +P ++
Sbjct: 1110 TPRYVNRKGVTLPTSSEQTKRAKRESLQQKQILVPELC--LVHPFPASLWRKAVCLPCVL 1167
Query: 407 HRLQSLLLAVNLK 419
+R+ SLLLA L+
Sbjct: 1168 YRMNSLLLAEQLR 1180
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 48 CTLYLPNNCPIQTVIAQGNIKT---LKQTACLEACKKLHQIGALTDNLLP 94
C+L+LP N P++ I + KQ L+ C++LH++G L DNL+P
Sbjct: 780 CSLHLPINSPLKRCIVGDPMPGKLLAKQAVALKTCEELHKMGELDDNLVP 829
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L ++S PS+L++ALT + +RLE +GD+ L Y +T +LY +P++ G
Sbjct: 1542 LSSHSGPSPSILLQALTMSNA---NDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGK 1598
Query: 673 LTDMRSASVNN 683
L+ +RS ++N
Sbjct: 1599 LSHLRSRQISN 1609
>gi|193582606|ref|XP_001943370.1| PREDICTED: endoribonuclease Dcr-1-like [Acyrthosiphon pisum]
Length = 1626
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 206/381 (54%), Gaps = 31/381 (8%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+TT +G+ LE LET+GDSFLKYA + L+ T+ N HEG+LS + +SN
Sbjct: 1189 SILLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVSNL 1248
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
L +LG + + F+P+ +P G ++L + ++ N I +T + K+
Sbjct: 1249 NLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKL-EKAVINS-NISIT-QHITNDKS 1305
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYERQFQVQAERLVN---- 606
+AD VEALIGA+L + G L+F+ +GI V D + Y + R VN
Sbjct: 1306 IADCVEALIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLPPSPLLRNVNDPEG 1365
Query: 607 --------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
E L Y F+D S L++A+TH SY + CYQRLEFLGDAVLDYLIT
Sbjct: 1366 ELTKLMDGFESFEQHLGYYFQDRSYLLQAMTHASYYPNCLTDCYQRLEFLGDAVLDYLIT 1425
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINI-- 712
+LY PG LTD+RSA VNN +A +VK+G HK++ H S L Y+++ I
Sbjct: 1426 RHLYEDKRRHPPGALTDLRSALVNNTIFASLAVKNGFHKYLKHLSPGLSEVVYRFVAIQE 1485
Query: 713 ----TVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
T+D S E F + PK LGDI ES++GAI++DS + + V++ ++
Sbjct: 1486 ENGHTIDEEFCFSGEDDFEDAEDVEAPKVLGDIFESVAGAIYLDSNMSLDAVWKVYHKIM 1545
Query: 769 EPMIT--PETMRLQPARELNE 787
E I + + + P REL E
Sbjct: 1546 ENEIKQFSKNVPISPVRELLE 1566
>gi|391341486|ref|XP_003745061.1| PREDICTED: endoribonuclease Dicer [Metaseiulus occidentalis]
Length = 1863
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 222/470 (47%), Gaps = 74/470 (15%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + L+ TY HEG LS + + ISN L
Sbjct: 1363 LLQALTMSNANDGINLERLETVGDSFLKYAITNYLYCTYLGVHEGKLSFLRSKQISNVNL 1422
Query: 497 CKLGCDHKLPGFIRTEPFDPK-MWMIPG-----------------------------DNS 526
+LG + + + F+P W+ PG + S
Sbjct: 1423 YRLGKELGIGSLMVATKFEPSDNWLAPGFCIPEGLEKAVLDSKIPNSHCNISQFKDGEAS 1482
Query: 527 GSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 586
G E +SL I K++AD +EALIGA+L + G L + G++V
Sbjct: 1483 GEGEFVPYSLLTHHSI--------PDKSIADCLEALIGAYLVSCGRCNTLKCMTWFGLRV 1534
Query: 587 D------------FVNVPYERQFQVQAERLVNVRH----LESLLNYSFRDPSLLVEALTH 630
F +P L + H E + Y F++ L++A TH
Sbjct: 1535 LPLDCEGDAFASLFKKIPPPLPASYDERVLRQLLHGHVSFEERIGYKFKNKGFLLQAFTH 1594
Query: 631 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY-NKYPTLSPGDLTDMRSASVNNDCYALS 689
SY + CYQRLEFLGDAVLDYLIT YLY + SPG LTD+RSA VNN +A
Sbjct: 1595 ASYHYNTLTDCYQRLEFLGDAVLDYLITRYLYEDPVKQHSPGALTDLRSALVNNTFFAAL 1654
Query: 690 SVKHGLHKHILHASQELYKWINITVDSFERLSLESTF----------GWESETSFPKALG 739
+VK+ HK+ L+ S L+K I+ V + + LS + F E PKALG
Sbjct: 1655 AVKYEFHKYFLNLSPRLFKLIHRFVSTKKHLSGKQYFEKYYLGEDECEEAEEIEVPKALG 1714
Query: 740 DIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSM 796
DI ES++GAI++DSG + + + +++P I + + P REL E Q F
Sbjct: 1715 DIFESVAGAIYLDSGMSLDTTWNVYLAMMKPEIEYFSKHVPKSPIRELLELEPQTAKFEK 1774
Query: 797 KKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ +NGK V VEV G+ +K AK A+K L+S++
Sbjct: 1775 AELT---LNGKIRVKVEVFGKGSFI---GIGRNKRIAKCTAAKRALRSVE 1818
>gi|167046036|gb|ABZ10549.1| dicer 1 [Nematostella vectensis]
Length = 412
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 192/384 (50%), Gaps = 68/384 (17%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+TTK + F LE LE LGD+FLK A S L+ Y++ EG L+ +K +SN AL
Sbjct: 20 LLQALTTKSAGDAFDLERLEMLGDAFLKQAVSIFLYCCYKDGDEGKLTKRKTSQLSNRAL 79
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPG------DNSGSYELNDHSLFNER---------- 540
++ C LP +++ D W P + GS + + N+R
Sbjct: 80 YRVACRLGLPEYLQNTQLDRVSWTTPSLQAAEVEPVGSPGKSQKTASNKRCQSASRQPEN 139
Query: 541 -------KIYVTGRKK-----VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-- 586
+ T R K + K+VAD VEALIGA+L+T G L FLD +G+KV
Sbjct: 140 RPEMSTLEKPETARDKALHQSIPDKSVADSVEALIGAYLTTCGYQGALHFLDWLGVKVLP 199
Query: 587 ---------------DFVNVP----YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
P Y QV V ++ E+ + Y F + L++A
Sbjct: 200 ESPMSTDGPRASSKYSIFTRPTITEYNSNPQVLKRFAVQLQGFENRIGYEFSNKLYLIQA 259
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTH SY + CYQRLEFLGDA+LD+L+T +Y++ L PG+LTD+R A VNN+ +A
Sbjct: 260 LTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTNLDPGELTDLRQALVNNNIFA 319
Query: 688 LSSVKHGLHKHILHASQELY---------------KWINITVDSFERLSLESTFGWESET 732
+VKHG +K + S E + + I I+ D F LS + G E+
Sbjct: 320 EIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQISKDPFLTLSNDDEEGIEA-- 377
Query: 733 SFPKALGDIIESLSGAIFVDSGCN 756
PK LGDI ES++GAIF+DSG +
Sbjct: 378 --PKVLGDIFESVAGAIFLDSGMD 399
>gi|158300291|ref|XP_320248.4| AGAP012289-PA [Anopheles gambiae str. PEST]
gi|157013088|gb|EAA00264.4| AGAP012289-PA [Anopheles gambiae str. PEST]
Length = 1672
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 214/436 (49%), Gaps = 70/436 (16%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
NV + S +L+A+TTK + F+LE E LGD+FLK+A S + + + HEG L+ K
Sbjct: 1191 NVALQQSDLLQALTTKSSADVFNLERFEVLGDAFLKFAVSVYILFRHTSWHEGYLTTCKG 1250
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPKM-WM-----IPG-------DNSGSYELNDHS 535
R++SN L + LPG I+ PFDPK W+ +PG D + S L +
Sbjct: 1251 RMVSNRNLLYCAMGYGLPGKIKAHPFDPKNDWVPPLSTVPGAVRRAMVDANESPALLYNL 1310
Query: 536 LFNERKIY-----------------------------VTGRKKVKSKTVADVVEALIGAF 566
E +I V + +++ K VADV EAL+G
Sbjct: 1311 KLTEEEIQSGVVAQATVDKFLPLIEQAPAPSQSTLHTVLQQVQIRDKVVADVTEALLGVC 1370
Query: 567 LSTGGENVGLIFLDRIGIKVDFVNVPYERQ---------FQVQ---AERLVNVRHLESLL 614
+ T G FL +GI +VP + F V+ + L N +E+ L
Sbjct: 1371 VKTVGYERSFRFLSHLGIIPKGADVPMLLRTTTFPIGDYFPVRHKVDQLLCNPERIEATL 1430
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
Y FR+ + L++A TH SY + YQ+LEFLGDAVLD+L+++Y+Y + P++SPG LT
Sbjct: 1431 GYRFRNRTYLLQAFTHTSYTSNSLTGSYQQLEFLGDAVLDFLVSMYIYERNPSMSPGQLT 1490
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW------ 728
D+RSA VNN A V++ LH+HIL S L I V + R W
Sbjct: 1491 DLRSALVNNVNLACVLVRNELHRHILSQSPMLTDAIGKFV-AVHRCHRNQGSNWVRLLTE 1549
Query: 729 ESET------SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR--LQ 780
ES+T PK LGD++E+L GAI++DSG + +E LL I T + +Q
Sbjct: 1550 ESDTPMAEYVDVPKVLGDVLEALIGAIYLDSGNDLAATWEVCFRLLRDEIADFTRKTPIQ 1609
Query: 781 PARELNEYCQKH-HFS 795
R+L E+ + HFS
Sbjct: 1610 VVRQLYEHPEASPHFS 1625
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 170/420 (40%), Gaps = 71/420 (16%)
Query: 47 ICTLYLPNNCPIQTVI---AQGNIKTLKQTACLEACKKLHQIGALTDNLLPDVV---VEE 100
I T+ LP ++ VI N+K KQ+A ACK+L ++G L LLP VEE
Sbjct: 611 IVTVKLPLQSTVREVIHGQTMKNLKLAKQSAAFNACKRLFEVGELNMYLLPIATKDKVEE 670
Query: 101 HDAQ------KHGNEP---------YDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQN 145
Q K +EP Y H I +P E V PQ + Y++ ++ +
Sbjct: 671 LSEQYFKLWRKMSDEPNPKQAGTMKYVRGHKIVYPEETVGCTPQADGEQCYVYIVRMRAH 730
Query: 146 FNYDIPAHDIVLAVRTELESEIKKVNFDL-------EVDRGRLTVNLKHLGK-------- 190
F D H + + EL S NF + + R +L V L +G
Sbjct: 731 F--DANTHLENVRIFQELYSSAN--NFGILTRKRLPRLARMKLFVTLGAIGVEIVPEPVC 786
Query: 191 IQLTPDKVLLCR--RFQIALFRVIMDHNLDKLNEILKGLWLRDNL--EIDYLLLPA-SEQ 245
I L PD L R RF + LFR ++ ++ K + D L E +L++P Q
Sbjct: 787 ITLAPDSGELQRLKRFHLLLFRDLL--------KVWKPFTVLDALPEENGFLIVPMLRSQ 838
Query: 246 SIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYY 305
SIDWE + + L+ ST + ++ ++ +++ P Q Y
Sbjct: 839 SIDWELMGKFPY-----LRPAAETSTRARQH-LRFETEQYLLRVVHPWYKNDP--DQNYV 890
Query: 306 ITGVLGHLNANSLFTRNDGGAITYKKHY-EERYGIQLCFDQELLLNGRRIFHAQNYLSKC 364
+ V L S F + +Y++++ +E + + + + + L+ + I + N L
Sbjct: 891 VVRVRDDLRPTSPFP--NAKYDSYEQYFAQEHHQVVVRHEDQFLIEVKGITTSLNRLHPG 948
Query: 365 RQEKQREPSKISFE-----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK 419
+ ++ + L PEL P + T +PS +HR+ LLLA ++
Sbjct: 949 AEADGGASTRSRYWEFQEILIPELVHNFEFPADY--WLKATLLPSALHRVHYLLLAEGIR 1006
>gi|270015102|gb|EFA11550.1| dicer-1 [Tribolium castaneum]
Length = 1835
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 226/479 (47%), Gaps = 78/479 (16%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + L+ Y+N HEG LS + + +SN L
Sbjct: 1355 LLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSNLNL 1414
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIP------------------------GDNSGSYEL 531
+LG L ++ FDP W+ P D + + ++
Sbjct: 1415 YRLGRRKGLGEYMIATKFDPHDNWLPPCFYVPKELEEALIDAQFPANCWTVADMAATRDM 1474
Query: 532 N-------------DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 578
SL N + + + K++AD VEALIGA+L G L+F
Sbjct: 1475 TLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLF 1534
Query: 579 LDRIGIKV------------DFVNVPYERQFQVQAERLV----NVRHLESLLNYSFRDPS 622
+ +GI+V + P E L E + Y FRD S
Sbjct: 1535 MAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLLDGYDQFERHIGYKFRDRS 1594
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L++ALTH S+ + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VN
Sbjct: 1595 YLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALVN 1654
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE----------- 731
N +A +V++G H++ + S L N V+ F RL +S E
Sbjct: 1655 NTIFASLAVRNGFHRYFRNLSPSL----NEVVEKFVRLQEDSGHTLVDELYLVVETEEVE 1710
Query: 732 -TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEY 788
PKALGD+ ES++GAIF+DSG + + V++ +++ I + ++ P REL E
Sbjct: 1711 DVEVPKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNKVPKSPIRELLEL 1770
Query: 789 -CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ F + +A + VTVEV G +FK + AK A+K LK+LK
Sbjct: 1771 EPETAKFGKPEKLAD--GRRVRVTVEVFGKG-VFKGIGRNY--RIAKCTAAKCALKNLK 1824
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 169/434 (38%), Gaps = 82/434 (18%)
Query: 47 ICTLYLPNNCPIQ-TVIAQGNIKTL--KQTACLEACKKLHQIGALTDNLLP----DVVVE 99
IC++ LP N P++ TV + I TL ++ A C+ LH+ G L DNL P + V
Sbjct: 622 ICSIRLPINSPVKKTVTSPPMINTLLARRAAAFMICQLLHKAGELDDNLQPIGKENFKVN 681
Query: 100 EHDAQKHGNEPYDAE--------------------------HPIYFPPELVNQCPQDTKI 133
E D E D E HPI P + K+
Sbjct: 682 EEDWNSSALEESDEENLDPRPGTTKRRQYYYKKVADALLDCHPIIGQPTYFYKIVM--KL 739
Query: 134 TYHCYLIELKQNFNYDI-PAHDIVLAVRTELESEIKKVN-FDLEVDRGRLTVNLKHLGKI 191
T C L E + I P D EI K++ F + G ++V+L+ ++
Sbjct: 740 T--CPLPEEQNTRGRKIYPPEDSPQGFGILTSKEIPKISAFPIFTRSGEVSVDLQLCSQL 797
Query: 192 QLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLP---ASEQSID 248
+T +++ R F F ++ +L + L L+ D YL++P + ++D
Sbjct: 798 IVTENQICKIREFLNYTFTSVL-----RLQKYLT-LFNPDASANSYLIVPTIDGATTTVD 851
Query: 249 WEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP-----HSGQI 303
W+ + + + N + + + + Y V P Q
Sbjct: 852 WDFIDLI----------YANLTVLPEIIPEEVRKSYEFDPEKYRDAVVMPWYRNQDQPQY 901
Query: 304 YYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYL-- 361
+Y+ + +LN S F +D T++++Y +Y IQ+ + LL+ N+L
Sbjct: 902 FYVAEICSNLNPASDFPGSDYA--TFEEYYLRKYSIQIQNKSQHLLDVDHTSARLNFLTP 959
Query: 362 -------------SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
S+ + +RE + L PELC I P S S + +P I++R
Sbjct: 960 RYVNRKGVALPTSSEATKRAKREKLEQKQILVPELCAI--HPFSASLWRKAVCLPCILYR 1017
Query: 409 LQSLLLAVNLKNML 422
+ +LLLA ++ +
Sbjct: 1018 INALLLADQIRRTV 1031
>gi|189234048|ref|XP_968993.2| PREDICTED: Dicer-1 [Tribolium castaneum]
Length = 1865
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 226/479 (47%), Gaps = 78/479 (16%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + L+ Y+N HEG LS + + +SN L
Sbjct: 1385 LLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSNLNL 1444
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIP------------------------GDNSGSYEL 531
+LG L ++ FDP W+ P D + + ++
Sbjct: 1445 YRLGRRKGLGEYMIATKFDPHDNWLPPCFYVPKELEEALIDAQFPANCWTVADMAATRDM 1504
Query: 532 N-------------DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 578
SL N + + + K++AD VEALIGA+L G L+F
Sbjct: 1505 TLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLF 1564
Query: 579 LDRIGIKV------------DFVNVPYERQFQVQAERLV----NVRHLESLLNYSFRDPS 622
+ +GI+V + P E L E + Y FRD S
Sbjct: 1565 MAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLLDGYDQFERHIGYKFRDRS 1624
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L++ALTH S+ + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VN
Sbjct: 1625 YLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALVN 1684
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE----------- 731
N +A +V++G H++ + S L N V+ F RL +S E
Sbjct: 1685 NTIFASLAVRNGFHRYFRNLSPSL----NEVVEKFVRLQEDSGHTLVDELYLVVETEEVE 1740
Query: 732 -TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEY 788
PKALGD+ ES++GAIF+DSG + + V++ +++ I + ++ P REL E
Sbjct: 1741 DVEVPKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNKVPKSPIRELLEL 1800
Query: 789 -CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ F + +A + VTVEV G +FK + AK A+K LK+LK
Sbjct: 1801 EPETAKFGKPEKLAD--GRRVRVTVEVFGKG-VFKGIGRNY--RIAKCTAAKCALKNLK 1854
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 169/434 (38%), Gaps = 82/434 (18%)
Query: 47 ICTLYLPNNCPIQ-TVIAQGNIKTL--KQTACLEACKKLHQIGALTDNLLP----DVVVE 99
IC++ LP N P++ TV + I TL ++ A C+ LH+ G L DNL P + V
Sbjct: 622 ICSIRLPINSPVKKTVTSPPMINTLLARRAAAFMICQLLHKAGELDDNLQPIGKENFKVN 681
Query: 100 EHDAQKHGNEPYDAE--------------------------HPIYFPPELVNQCPQDTKI 133
E D E D E HPI P + K+
Sbjct: 682 EEDWNSSALEESDEENLDPRPGTTKRRQYYYKKVADALLDCHPIIGQPTYFYKIVM--KL 739
Query: 134 TYHCYLIELKQNFNYDI-PAHDIVLAVRTELESEIKKVN-FDLEVDRGRLTVNLKHLGKI 191
T C L E + I P D EI K++ F + G ++V+L+ ++
Sbjct: 740 T--CPLPEEQNTRGRKIYPPEDSPQGFGILTSKEIPKISAFPIFTRSGEVSVDLQLCSQL 797
Query: 192 QLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLP---ASEQSID 248
+T +++ R F F ++ +L + L L+ D YL++P + ++D
Sbjct: 798 IVTENQICKIREFLNYTFTSVL-----RLQKYLT-LFNPDASANSYLIVPTIDGATTTVD 851
Query: 249 WEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP-----HSGQI 303
W+ + + + N + + + + Y V P Q
Sbjct: 852 WDFIDLI----------YANLTVLPEIIPEEVRKSYEFDPEKYRDAVVMPWYRNQDQPQY 901
Query: 304 YYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYL-- 361
+Y+ + +LN S F +D T++++Y +Y IQ+ + LL+ N+L
Sbjct: 902 FYVAEICSNLNPASDFPGSDYA--TFEEYYLRKYSIQIQNKSQHLLDVDHTSARLNFLTP 959
Query: 362 -------------SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
S+ + +RE + L PELC I P S S + +P I++R
Sbjct: 960 RYVNRKGVALPTSSEATKRAKREKLEQKQILVPELCAI--HPFSASLWRKAVCLPCILYR 1017
Query: 409 LQSLLLAVNLKNML 422
+ +LLLA ++ +
Sbjct: 1018 INALLLADQIRRTV 1031
>gi|371486404|gb|AEX31247.1| Dicer 2 isoform A [Aedes albopictus]
gi|371486406|gb|AEX31248.1| Dicer 2 isoform B [Aedes albopictus]
Length = 1659
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 202/429 (47%), Gaps = 69/429 (16%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
NV + +L+AITTK + F LE E LGD+FLK+A S L K ++ HEG L+ K
Sbjct: 1168 NVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKG 1227
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPK------MWMIPGDNSGSYELNDHSLFNERKI 542
+I+SN L + LPG ++ FDPK + +P + + + +HS ++
Sbjct: 1228 QIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRL 1287
Query: 543 YVT-------------------------------------GRKKVKSKTVADVVEALIGA 565
+T ++ + KT AD +EAL+G
Sbjct: 1288 TMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGV 1347
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL-------------VNVRHLES 612
+ T G L G+ +V +++ +RL N +ES
Sbjct: 1348 CVQTVGMQRSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIES 1407
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + PT+SPG
Sbjct: 1408 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1467
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-----------DSFERLS 721
LTD+RSA VNN A V+HGLH +IL S +N V D L
Sbjct: 1468 LTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLV 1527
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL--EPMITPETMRL 779
ES PKALGD+ ESL A+F+DSG + V + I ++ E M E +
Sbjct: 1528 EESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMGNEIMTFTENTPI 1587
Query: 780 QPARELNEY 788
Q R+L E+
Sbjct: 1588 QIVRQLYEF 1596
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 142/695 (20%), Positives = 272/695 (39%), Gaps = 113/695 (16%)
Query: 57 PIQTVIAQG-------NIKTLKQTACLEACKKLHQIGALTDNLLP-----------DVV- 97
P+Q+ + + NIK K++A AC+KL++ L+++L+P DV
Sbjct: 607 PLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLIPIDCRNQLHNLKDVYF 666
Query: 98 -----VEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPA 152
+E + G + H I +P + P+ K Y Y++ + F D P+
Sbjct: 667 RHWADFDEDSGKLAGTQKCIRTHAIEYPKQTTGCFPEPGKPCY-IYVLRIGAGFEQD-PS 724
Query: 153 HDIVLAVRTELESE-------------IKKVNFDLEVDRGRLTVNLKHLGKIQLTPD--- 196
++ V + SE + K+ F V G + V+L + P+
Sbjct: 725 NENVNIFHSLYNSENNFGIMTTKPLPVLAKMKF--FVTLGLINVHLVETPIV--LPNAGS 780
Query: 197 --KVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS-IDWEPVA 253
++ L R+F + +FR ++ D L ++ DN +L++P + + +DWE +
Sbjct: 781 EVELALLRQFHVTVFRDVLRLWKDFL------VYDYDNGINSFLVVPLKKSTHLDWELIR 834
Query: 254 SLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP----HSGQIYYITGV 309
+ + STM+ +R+ Y V P + Q Y +T V
Sbjct: 835 QFQYLSEPP----SEMSTMARSRMDFEADN-------YRHKVILPWYKNNKEQPYVVTMV 883
Query: 310 LGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQ 369
HL S F + G +Y ++ E Y + + + L+ + I N L+ ++
Sbjct: 884 HEHLTPGSPFPNAEYG--SYANYFSEAYHLAVVKPDQFLIEVKGITSYLNRLNPGVEDDG 941
Query: 370 REPSKISFE----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA----VNLKNM 421
+ + L PELC P + T +PS +HR+ LLLA V+L
Sbjct: 942 KSTRSKHWRFNEILIPELCHNYQFPADY--WLKATLLPSALHRIHYLLLAEKIRVDLATG 999
Query: 422 LLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
C++N TI V K ++G +S E L + + +
Sbjct: 1000 ANVGCLENHTIEDVDV-----EYKQRKG--KQSEEELELMEFEDDEDEDDEFDLEEAKRS 1052
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD-PKMWMIPGDNSGSYELNDHSLFNER 540
L++ + ++ + + D LP EP D + W D +L+ ++ F +
Sbjct: 1053 LMAPQDLNELARNQMTSVTGDIPLPWQDDEEPVDIERNW----DQVSKMDLDYYNAFVNK 1108
Query: 541 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ 600
++ R+ + + A+ S+ I ++VP E++F ++
Sbjct: 1109 FSDLSVREMTAERISSAYTSAIYRRATSSPKREPMAI-----------LDVPVEQKFAIK 1157
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
+L + + +N + + +L T + + ++ +R E LGDA L + ++Y
Sbjct: 1158 LLQL----NPANTINVNLQQKDILKAITTKSAADVFDL----ERYELLGDAFLKFATSLY 1209
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
L + G LT ++ V+N ++K+GL
Sbjct: 1210 LIKYHKEWHEGFLTAVKGQIVSNRNLVYCAIKYGL 1244
>gi|194744012|ref|XP_001954492.1| GF18290 [Drosophila ananassae]
gi|190627529|gb|EDV43053.1| GF18290 [Drosophila ananassae]
Length = 2252
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 234/527 (44%), Gaps = 126/527 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1728 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1787
Query: 495 ALCKLGCDHKLPGFI---RTEPFD---PKMWMIP-------------------------- 522
L +LG +L ++ + EP D P + +P
Sbjct: 1788 NLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLDIK 1847
Query: 523 -----------------------GDNSGSYE-----LNDHSLFNERKIYVTGRKKVKSKT 554
G SG + ND S F + + + K+
Sbjct: 1848 NLSSVQICELVREKAEALGLEQNGPQSGQLDDSNDSCNDFSCFIPYNL--VSQHSIPDKS 1905
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV-DFVNVPYERQ--------FQVQAERLV 605
+AD VEALIGA+L G L+F+ +GI+V F P E++ + AE +V
Sbjct: 1906 IADCVEALIGAYLIECGPRGALLFMAWLGIRVLPFTRQPAEQEEAKRVPGSSKSDAEGMV 1965
Query: 606 NV-----------------------------RHLESLLNYSFRDPSLLVEALTHGSYMLP 636
V E+ L Y FRD S L++A+TH SY
Sbjct: 1966 TVYGAWPTPRSPLLHFAPNATGELDQLLSGFEEFEASLGYKFRDRSYLLQAMTHASYTPN 2025
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
+ CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +V+HG H
Sbjct: 2026 RLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFH 2085
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWE--------------SETSFPKALGDII 742
K H S L N +D F R+ E+ + PKALGD+
Sbjct: 2086 KFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECDDAEDVEVPKALGDVF 2141
Query: 743 ESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMKKT 799
ES++GAIF+DS + +VV++ ++ P I ++ P REL E + F +
Sbjct: 2142 ESIAGAIFLDSNMSLDVVWQVYSNMMSPEIEQFSNSVPKSPIRELLELEPETAKFGKPEK 2201
Query: 800 VAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+A + VTV+V GT + AK A+K L+ LK
Sbjct: 2202 LAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAKCTAAKCALRQLK 2243
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1718 GLVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEG 1774
Query: 672 DLTDMRSASVNN 683
L+ +RS V N
Sbjct: 1775 KLSHLRSKQVAN 1786
>gi|371486410|gb|AEX31250.1| Dicer 2 [Aedes albopictus]
Length = 1659
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 202/429 (47%), Gaps = 69/429 (16%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
NV + +L+AITTK + F LE E LGD+FLK+A S L K ++ HEG L+ K
Sbjct: 1168 NVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKG 1227
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPK------MWMIPGDNSGSYELNDHSLFNERKI 542
+I+SN L + LPG ++ FDPK + +P + + + +HS ++
Sbjct: 1228 QIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRL 1287
Query: 543 YVT-------------------------------------GRKKVKSKTVADVVEALIGA 565
+T ++ + KT AD +EAL+G
Sbjct: 1288 TMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGV 1347
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL-------------VNVRHLES 612
+ T G L G+ +V +++ +RL N +ES
Sbjct: 1348 CVQTVGMQRSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIES 1407
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + PT+SPG
Sbjct: 1408 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1467
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-----------DSFERLS 721
LTD+RSA VNN A V+HGLH +IL S +N V D L
Sbjct: 1468 LTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLV 1527
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL--EPMITPETMRL 779
ES PKALGD+ ESL A+F+DSG + V + I ++ E M E +
Sbjct: 1528 EESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMGNEIMTFTENTPI 1587
Query: 780 QPARELNEY 788
Q R+L E+
Sbjct: 1588 QIVRQLYEF 1596
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 141/695 (20%), Positives = 272/695 (39%), Gaps = 113/695 (16%)
Query: 57 PIQTVIAQG-------NIKTLKQTACLEACKKLHQIGALTDNLLP-----------DVV- 97
P+Q+ + + NIK K++A AC+KL++ L+++L+P DV
Sbjct: 607 PLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLIPIDCRNQLNNLKDVYF 666
Query: 98 -----VEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPA 152
+E + G + H I +P + P+ K Y Y++ + F D P+
Sbjct: 667 RHWADFDEDSGKLAGTQKCIRTHAIEYPKQTTGCFPEPGKPCY-IYVLRIGAGFEQD-PS 724
Query: 153 HDIVLAVRTELESE-------------IKKVNFDLEVDRGRLTVNLKHLGKIQLTPD--- 196
++ V + SE + K+ F V G + V+L + P+
Sbjct: 725 NENVNIFHSLYNSENNFGIMTTKPLPVLAKMKF--FVTLGLINVHLVETPIV--LPNAGS 780
Query: 197 --KVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS-IDWEPVA 253
++ L R+F + +FR ++ D L ++ DN +L++P + + +DWE +
Sbjct: 781 EVELALLRQFHVTVFRDVLRLWKDFL------VYDYDNGINSFLVVPLKKSTHLDWELIR 834
Query: 254 SLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP----HSGQIYYITGV 309
+ + STM+ +R+ Y V P + Q Y +T V
Sbjct: 835 QFQYLSE----PPSEMSTMARSRMDFEADN-------YRHKVILPWYKNNKEQPYVVTMV 883
Query: 310 LGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQ 369
HL S F + G +Y ++ E Y + + + L+ + I N L+ ++
Sbjct: 884 HEHLTPGSPFPNAEYG--SYANYFSEAYHLAVVKPDQFLIEVKGITSYLNRLNPGVEDDG 941
Query: 370 REPSKISFE----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA----VNLKNM 421
+ + L PELC P + T +PS +HR+ LLLA V+L
Sbjct: 942 KSTRSKHWRFNEILIPELCHNYQFPADY--WLKATLLPSALHRIHYLLLAEKIRVDLATG 999
Query: 422 LLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
C++N TI V K ++G +S E L + + +
Sbjct: 1000 ANVGCLENHTIEDVDV-----EYKQRKG--KQSEEELELMEFEDDEDEDDEFDLEEAKRS 1052
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD-PKMWMIPGDNSGSYELNDHSLFNER 540
L++ + ++ + + D LP EP D + W D +L+ ++ F +
Sbjct: 1053 LMAPQDLNELARNQMTSVTGDIPLPWQDDEEPVDIERNW----DQVSKMDLDYYNAFVNK 1108
Query: 541 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ 600
++ R+ + + A+ S+ I +++P E++F ++
Sbjct: 1109 FSDLSVREMTAERISSAYTSAIYRRATSSPKREPMAI-----------LDIPVEQKFAIK 1157
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
+L + + +N + + +L T + + ++ +R E LGDA L + ++Y
Sbjct: 1158 LLQL----NPANTINVNLQQKDILKAITTKSAADVFDL----ERYELLGDAFLKFATSLY 1209
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
L + G LT ++ V+N ++K+GL
Sbjct: 1210 LIKYHKEWHEGFLTAVKGQIVSNRNLVYCAIKYGL 1244
>gi|195424855|gb|ACF96960.1| dicer-1 [Litopenaeus vannamei]
Length = 2473
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 232/512 (45%), Gaps = 111/512 (21%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY HEG LS + + +SN
Sbjct: 1963 SVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNL 2022
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP---------------GDNSGSYELND----- 533
L +LG L + F+P W+ P G +G + + D
Sbjct: 2023 NLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLH 2082
Query: 534 -------HSLFNERKIYVTGRKK-----------------------------VKSKTVAD 557
L ER + K + K++AD
Sbjct: 2083 DLASDEIRRLVQERSEQIKRSKSEQATSELMATQNPHDPPIFIPYNLLTQHSIPDKSIAD 2142
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLES----- 612
VEALIGA+L+T G L+F+ +GIKV +P + +A L+ HLES
Sbjct: 2143 CVEALIGAYLTTCGPRGALLFMSWLGIKV----LPCTLESSPEACELITYGHLESPQSPP 2198
Query: 613 ------------------------LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 648
+ Y+FRD S L++A TH SY + CYQRLEFL
Sbjct: 2199 YHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQASTHASYYKNRLTDCYQRLEFL 2258
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS----Q 704
GDAVLDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ H S +
Sbjct: 2259 GDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGPDR 2318
Query: 705 ELYKWINITVDSFERLSLESTF------GWESETSFPKALGDIIESLSGAIFVDSGCNKE 758
+ ++ + ++ +++ E F + PKALGD+ ES++GAIF+DSG + +
Sbjct: 2319 VIRDFVKMQEENGHKINEEYYFMEEDEREAAEDIEVPKALGDVFESVAGAIFLDSGSSLD 2378
Query: 759 VVFESIRPLLEPMITPETMRLQ---PARELNEYCQKHHFSMKKTVAPR-INGKAAVTVEV 814
V+ + M+ PE R P + E + + K R ++GK V+VE+
Sbjct: 2379 AVWS----VYYTMMCPEIERFSGVVPKSPIRELLEMEPETAKFGKPERLVDGKVRVSVEI 2434
Query: 815 HANGTLFKHTHADADKETAKKVASKEVLKSLK 846
G+ + + AK A+K L+ LK
Sbjct: 2435 FGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2463
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN-----GR---- 352
Q +Y+ + HLN S F D G T++K+Y +YG+Q+C + LL+ GR
Sbjct: 1428 QYFYVAEICTHLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLL 1485
Query: 353 ------RIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIM 406
R A S+ + +RE + L PELC I P SL + +P+I+
Sbjct: 1486 TPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTIL 1543
Query: 407 HRLQSLLLAVNLK 419
+R+ +LLLA L+
Sbjct: 1544 YRINALLLADQLR 1556
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
LLN+ PS++++ALT + +RLE +GD+ L Y IT +LY YP G
Sbjct: 1954 LLNHPGPSPSVILQALTMSNA---NDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGK 2010
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 2011 LSYLRSKQVSN 2021
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 48 CTLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
C + LP N P++ I Q + K A LE C++LHQ+G L D L P
Sbjct: 1151 CKIMLPINSPLKGTIEGPWQKKVSLAKMAAALECCRRLHQMGELDDQLQP 1200
>gi|242008637|ref|XP_002425109.1| dicer-1, putative [Pediculus humanus corporis]
gi|212508774|gb|EEB12371.1| dicer-1, putative [Pediculus humanus corporis]
Length = 471
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 224/465 (48%), Gaps = 78/465 (16%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
E+L+ LGDSFLK++ S LFKTY + HEG+L+ K +++ N L G LP FI T
Sbjct: 9 ENLKILGDSFLKFSCSFFLFKTYPSLHEGILTNVKGKLVGNKNLLDCGVAKNLPNFINTN 68
Query: 513 PFDPKM-WMIPGDNSGSYELN-------DHSLF----------------------NERKI 542
F P W P ++ LN D S+ N + I
Sbjct: 69 DFSPNFDWNPPLFSTPEVLLNYIVSKNMDPSIISRLEIPQKECLTGILSEETIESNRKLI 128
Query: 543 YVTGRKK---VKS----------KTVADVVEALIGAFLSTGGENVGLIFLDRIGI----- 584
G KK VKS KT++DVVEALIG +L GG G L+ GI
Sbjct: 129 DEEGVKKLGLVKSPFLNTELMSDKTISDVVEALIGVYLLNGGLAGGFKILNWFGILPESN 188
Query: 585 -----------KVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 633
+V+ VN + + V LE L Y+F+ LL+EA+TH SY
Sbjct: 189 GTYEEIMKKPVRVNDVNDEESAVMTILGD--VFYTDLEETLGYTFKRKELLLEAITHPSY 246
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
+ + CYQRLEFLGDA+LD+L+TVY+ + ++PG +TD+RSA VNN A SVK+
Sbjct: 247 VRNRLTPCYQRLEFLGDAILDFLVTVYIQENFKDMNPGLITDIRSALVNNSTLACLSVKY 306
Query: 694 GLHKHILHASQELYKWI----------NITVDSFERLSLESTFGWESET-SFPKALGDII 742
HK++L+ S L K I N V+ ++LE +E+ + PKALGDI
Sbjct: 307 DFHKYLLYTSSPLNKCIENFVKIQISNNHAVNEQALITLEENDAIMAESVTVPKALGDIF 366
Query: 743 ESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR--LQPARELNEYCQKHHFSMKKTV 800
ESL+GAIF+DS + E V+ +++ + T+ R L+E C + F
Sbjct: 367 ESLAGAIFIDSENSLETVWNVFYKIMKKELDEFTVNPPKTAVRVLHEICGEKPFFETTVY 426
Query: 801 APRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
++ K ++ + + + H D +K+ AKK A K LK +
Sbjct: 427 EKVVSVKCSI---YYKDEEIVAHGFGD-NKKDAKKSACKMALKQI 467
>gi|125586950|gb|EAZ27614.1| hypothetical protein OsJ_11558 [Oryza sativa Japonica Group]
Length = 258
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 140/209 (66%), Gaps = 1/209 (0%)
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS 703
RLEFLGDA+LD+L T Y Y+KYP +P LTD+RSASVNN+CYA ++VK GL+KHILH+S
Sbjct: 46 RLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSS 105
Query: 704 QELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFES 763
EL++ ++ ++ F + ++GWE+ PK LGD+IES++GAI++DS C+KEVV+ S
Sbjct: 106 SELHRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRS 165
Query: 764 IRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKH 823
++ LLEP+ TPET+ P + L E+C + F + ++G ++V V A T +
Sbjct: 166 MKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSA 224
Query: 824 THADADKETAKKVASKEVLKSLKASFPGT 852
T + K AKK+ASK VLK L A T
Sbjct: 225 TKSGPCKLVAKKLASKAVLKDLIAGHKDT 253
>gi|371486408|gb|AEX31249.1| Dicer 2 [Aedes albopictus]
Length = 1625
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 202/429 (47%), Gaps = 69/429 (16%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
NV + +L+AITTK + F LE E LGD+FLK+A S L K ++ HEG L+ K
Sbjct: 1134 NVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKG 1193
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPK------MWMIPGDNSGSYELNDHSLFNERKI 542
+I+SN L + LPG ++ FDPK + +P + + + +HS ++
Sbjct: 1194 QIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRL 1253
Query: 543 YVT-------------------------------------GRKKVKSKTVADVVEALIGA 565
+T ++ + KT AD +EAL+G
Sbjct: 1254 TMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGV 1313
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL-------------VNVRHLES 612
+ T G L G+ +V +++ +RL N +ES
Sbjct: 1314 CVQTVGIQRSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIES 1373
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + PT+SPG
Sbjct: 1374 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1433
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-----------DSFERLS 721
LTD+RSA VNN A V+HGLH +IL S +N V D L
Sbjct: 1434 LTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLV 1493
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL--EPMITPETMRL 779
ES PKALGD+ ESL A+F+DSG + V + I ++ E M E +
Sbjct: 1494 EESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGIMGNEIMTFTENTPI 1553
Query: 780 QPARELNEY 788
Q R+L E+
Sbjct: 1554 QIVRQLYEF 1562
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 139/677 (20%), Positives = 263/677 (38%), Gaps = 111/677 (16%)
Query: 57 PIQTVIAQG-------NIKTLKQTACLEACKKLHQIGALTDNLLP-----------DVV- 97
P+Q+ + + NIK K++A AC+KL++ L+++L+P DV
Sbjct: 607 PLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLIPIDCRNQLNNLKDVYF 666
Query: 98 -----VEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPA 152
+E + G + H I +P + P+ K Y Y++ + F D P+
Sbjct: 667 RHWADFDEDSGKLAGTQKCIRTHAIEYPKQTTGCFPEPGKPCY-IYVLRIGAGFEQD-PS 724
Query: 153 HDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVI 212
++ V + SE + G + P VLL R+F I +FR +
Sbjct: 725 NENVNIFHSLYNSE-------------------NNFGIMTTKPLPVLL-RQFHITVFRDV 764
Query: 213 MDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS-IDWEPVASLSFPCDIGLKHHKNCST 271
+ D L ++ DN ++++P + + +DWE + + + ST
Sbjct: 765 LRLWKDFL------VYDYDNGINSFMVVPLKKSTHLDWELIRQFQYLSEPP----SEMST 814
Query: 272 MSNARVVQTKSGPLCTCMIYNSVVCTP----HSGQIYYITGVLGHLNANSLFTRNDGGAI 327
M+ +R+ Y V P + Q Y +T V HL S F + G
Sbjct: 815 MARSRMDFEADN-------YRHKVILPWYKNNKEQPYVVTMVHEHLTPGSPFPNAEYG-- 865
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE----LPPEL 383
+Y ++ E Y + + + L+ + I N L+ ++ + + L PEL
Sbjct: 866 SYANYFSEAYHLAVVKPDQFLIEVKGITSYLNRLNPGVEDDGKSTRSKHWRFNEILIPEL 925
Query: 384 CRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA----VNLKNMLLDHCMQNVTIPTSKVLE 439
C P + T +PS +HR+ LLLA V+L C++N TI V
Sbjct: 926 CHNYQFPADY--WLKATLLPSALHRIHYLLLAEKIRVDLATGANVGCLENHTIEDVDV-- 981
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
K ++G +S E L + + + L++ + ++ + +
Sbjct: 982 ---EYKQRKG--KQSEEELELMEFEDDEDEDDEFDLEEAKRSLMAPQDLNELARNQMTSV 1036
Query: 500 GCDHKLPGFIRTEPFD-PKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
D LP EP D + W D +L+ ++ F + ++ R+ + +
Sbjct: 1037 TGDIPLPWQDDEEPVDIERNW----DQVSKMDLDYYNAFVNKFSDLSVREMTAERISSAY 1092
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSF 618
A+ S+ I ++VP E++F ++ +L + + +N +
Sbjct: 1093 TSAIYRRATSSPKREPMAI-----------LDVPVEQKFAIKLLQL----NPANTINVNL 1137
Query: 619 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
+ +L T + + ++ +R E LGDA L + ++YL + G LT ++
Sbjct: 1138 QQKDILKAITTKSAADVFDL----ERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKG 1193
Query: 679 ASVNNDCYALSSVKHGL 695
V+N ++K+GL
Sbjct: 1194 QIVSNRNLVYCAIKYGL 1210
>gi|357607884|gb|EHJ65725.1| dicer-2 [Danaus plexippus]
Length = 1871
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 208/436 (47%), Gaps = 91/436 (20%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
+VL A+T K + F+LE ETLGDSFLK+AAS LF + EG L+ K R+I N
Sbjct: 1383 EVLSALTLIKSNDTFNLERSETLGDSFLKFAASLYLFHKFPQMDEGQLTNLKSRLIGNRN 1442
Query: 496 LCKLGCDHKLPGFIRTEPFDPKM-WMIPG------------------------------D 524
L G L G ++ E F P+ +++PG
Sbjct: 1443 LYYAGERAGLAGRMKVEQFSPRSDFLVPGFLAPSELVSFITRRKIRPTFLIGVQFPVEDA 1502
Query: 525 NSGSYELNDHSLFNER-------------------KIYVTGRKKVKSKTVADVVEALIGA 565
SG+ SL E+ + YV G + V K+VAD VEALIG
Sbjct: 1503 LSGNLSPESRSLLQEKLKDSDLAEEEPFGKAQNAMQRYV-GAQAVSDKSVADCVEALIGT 1561
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNV------------------ 607
+L +GG D + I F +P E +F + VN
Sbjct: 1562 YLLSGG------ITDAVSILEWFKIIPSEDKFLSFLTKKVNTVISEGKATVQEVDWLLNS 1615
Query: 608 --RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+E++L Y F+DPSLL+EAL+H SY+ R Y+RLEFLGDA+LD+LIT Y+Y
Sbjct: 1616 CRSDIETILGYKFKDPSLLLEALSHASYIRNRYTRSYERLEFLGDAILDFLITAYIYENC 1675
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA-SQELYKWINITVDSFERLS--- 721
LSPGDLTD+RSA VNN +A V+ GLHK+ + L I V+ E+L
Sbjct: 1676 GDLSPGDLTDLRSALVNNVTFASYVVRLGLHKYFCSQFNGVLENAIKTFVEHQEQLDHVL 1735
Query: 722 LESTFGWESE--------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
LE E PKAL DI ESL+GA+F+DSG + ++V++ I ++ I
Sbjct: 1736 LEDVLYLIEEEDCNIAQYIDVPKALSDIFESLTGAMFLDSGGDLKLVWKVIYRIMHKEIH 1795
Query: 774 PETMRL--QPARELNE 787
+M++ QP R L E
Sbjct: 1796 DFSMKVPKQPVRVLME 1811
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 172/445 (38%), Gaps = 93/445 (20%)
Query: 42 NKEMGICTLYLPNNCPIQTVIAQG----NIKTLKQTACLEACKKLHQIGALT-DNLLPDV 96
NK M T+ +P CPI+ + QG ++K K++A L C KLH+ G L + LLP V
Sbjct: 806 NKTM--VTIIMPIACPIKEPV-QGRPMSSVKNAKRSAALNVCIKLHKAGELDYETLLPKV 862
Query: 97 V--------------------VEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYH 136
E D G + +HP+++P L +D +
Sbjct: 863 KGLIDFSTTDVSSCFPNWRDETEVSDEGPPGTKKRVRKHPVHYPKCLDGPKTRDELTKCY 922
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFD-----------LEVDRGRLTVNL 185
++I+L+ F+ A + L + + FD L V R T+ +
Sbjct: 923 LHVIKLETAFDEPSDAREKALYDMLRRKEGYGFITFDRLPELCAFPMFLTVGEVRTTLQV 982
Query: 186 KHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ 245
+ I L + L ++F +F D++ EI K + D + +P
Sbjct: 983 NY-AAIILDTSHLELIKQFHFFIF--------DQVLEIAKKFLVHDGRVNNLYAVPLKYD 1033
Query: 246 S---IDWEPVASLS--FPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP-H 299
+ IDW + + PCD Q ++ T +Y++ V TP +
Sbjct: 1034 NGYDIDWNVMQTYKQIAPCD--------------EPTAQERASLSVTKEMYDNCVVTPWY 1079
Query: 300 SGQI----YYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQ-LCFDQELLLNGRRI 354
G + Y ++ VL +L S F D T+ +Y +Y ++ L + LL R I
Sbjct: 1080 RGSLHPDRYIVSRVLEYLTPYSKF--EDNSFETFADYYSNKYNLEILGRKDQPLLEVRNI 1137
Query: 355 FHAQNYL------SKCRQEKQR----------EPSKISFELPPELCRIIMGPMSLSTFYS 398
N L + +KQR +P + + PE C P L +Y
Sbjct: 1138 SSRMNCLLPRAATIRGLSDKQRRLASLAHGDYKPREFTELFVPEYCVRADYPAHL--WYK 1195
Query: 399 FTFVPSIMHRLQSLLLAVNLKNMLL 423
+PSI+HR+ LL+A L+ +L
Sbjct: 1196 AIILPSIVHRVTMLLIAEELRVQIL 1220
>gi|148829108|gb|ABR14013.1| Dicer-1 [Penaeus monodon]
Length = 2473
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 227/532 (42%), Gaps = 151/532 (28%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY HEG LS + + +SN
Sbjct: 1963 SVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNL 2022
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP---------------GDNSGSYELND----- 533
L +LG L + F+P W+ P G +G + + D
Sbjct: 2023 NLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLH 2082
Query: 534 -------HSLFNERKIYVTGRKK-----------------------------VKSKTVAD 557
L ER + K + K++AD
Sbjct: 2083 DLASDEIRRLVQERSEQIKRSKSEQATSELMATQNPHDLPIFIPYNLLTQHSIPDKSIAD 2142
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLES----- 612
VEALIGA+L+T G L+F+ +GIKV +P + +A L+ HLES
Sbjct: 2143 CVEALIGAYLTTCGPRGALLFMSWLGIKV----LPCTLESSPEASELITYGHLESPQSPL 2198
Query: 613 ------------------------LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 648
+ Y+FRD S L++A TH SY + CYQRLEFL
Sbjct: 2199 YHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQAFTHASYYKNRLTDCYQRLEFL 2258
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYK 708
GDAVLDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ H S L +
Sbjct: 2259 GDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDR 2318
Query: 709 WINITVDSFERLSLESTFGWESETSF--------------PKALGDIIESLSGAIFVDSG 754
I F ++ E+ E F PKALGD+ ES++GAIF+DSG
Sbjct: 2319 VIR----DFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSG 2374
Query: 755 CNKEVVF--------------------ESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
+ + V+ IR LLE + PET + L
Sbjct: 2375 SSLDAVWSVYYTMMCREIEQFSGVVPKSPIRELLE--MEPETAKFGKPERL--------- 2423
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++GK V+VE+ G+ + + AK A+K L+ LK
Sbjct: 2424 ---------VDGKVRVSVEIFGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2463
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN-----GR---- 352
Q +Y+ + HLN S F D G T++K+Y +YG+Q+C + LL+ GR
Sbjct: 1428 QYFYVAEICTHLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLL 1485
Query: 353 ------RIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIM 406
R A S+ + +RE + L PELC I P SL + +P+I+
Sbjct: 1486 TPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTIL 1543
Query: 407 HRLQSLLLAVNLK 419
+R+ +LLLA L+
Sbjct: 1544 YRINALLLADQLR 1556
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
LLN+ PS++++ALT + +RLE +GD+ L Y IT +LY YP G
Sbjct: 1954 LLNHPGPSPSVILQALTMSN---ANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGK 2010
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 2011 LSYLRSKQVSN 2021
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 48 CTLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQ 104
C + LP N P++ I Q + K A LE C++LHQ+ L D L P V E
Sbjct: 1151 CKIMLPINSPLKGTIEGPWQSKVSLAKMAAALECCRRLHQMEELDDQLQP-VGKESMKLD 1209
Query: 105 KH-GNEPYDAEHPIYFPPELVNQCPQDTKITYHCY 138
H P D + P P P TK +CY
Sbjct: 1210 DHLCAPPADDQVPEGMPR------PGTTKRRQYCY 1238
>gi|289711908|gb|ACC62400.2| ribonuclease III [Penaeus monodon]
Length = 2473
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 227/532 (42%), Gaps = 151/532 (28%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY HEG LS + + +SN
Sbjct: 1963 SVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNL 2022
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP---------------GDNSGSYELND----- 533
L +LG L + F+P W+ P G +G + + D
Sbjct: 2023 NLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLH 2082
Query: 534 -------HSLFNERKIYVTGRKK-----------------------------VKSKTVAD 557
L ER + K + K++AD
Sbjct: 2083 DLASDEIRRLVQERSEQIKRSKSEQATSELTATQNPHDLPIFIPYNLLTQHSIPDKSIAD 2142
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLES----- 612
VEALIGA+L+T G L+F+ +GIKV +P + +A L+ HLES
Sbjct: 2143 YVEALIGAYLTTCGPRGALLFMSWLGIKV----LPCTLESSPEASELITYGHLESPQSPL 2198
Query: 613 ------------------------LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 648
+ Y+FRD S L++A TH SY + CYQRLEFL
Sbjct: 2199 YHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQAFTHASYYKNRLTGCYQRLEFL 2258
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYK 708
GDAVLDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ H S L +
Sbjct: 2259 GDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDR 2318
Query: 709 WINITVDSFERLSLESTFGWESETSF--------------PKALGDIIESLSGAIFVDSG 754
I F ++ E+ E F PKALGD+ ES++GAIF+DSG
Sbjct: 2319 VIR----DFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSG 2374
Query: 755 CNKEVVF--------------------ESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
+ + V+ IR LLE + PET + L
Sbjct: 2375 SSLDAVWSVYYTMMCREIEQFSGVVPKSPIRELLE--MEPETAKFGKPERL--------- 2423
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++GK V+VE+ G+ + + AK A+K L+ LK
Sbjct: 2424 ---------VDGKVRVSVEIFGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2463
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN-----GR---- 352
Q +Y+ + HLN S F D G T++K+Y +YG+Q+C + LL+ GR
Sbjct: 1428 QYFYVAEICTHLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLL 1485
Query: 353 ------RIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIM 406
R A S+ + +RE + L PELC I P SL + +P+I+
Sbjct: 1486 TPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTIL 1543
Query: 407 HRLQSLLLAVNLK 419
+R+ +LLLA L+
Sbjct: 1544 YRINALLLADQLR 1556
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
LLN+ PS++++ALT + +RLE +GD+ L Y IT +LY YP G
Sbjct: 1954 LLNHPGPSPSVILQALTMSN---ANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGK 2010
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 2011 LSYLRSKQVSN 2021
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 48 CTLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
C + LP N P++ I Q + K A LE C++LHQ+G L D L P
Sbjct: 1151 CKIMLPINSPLKGTIEGPWQSKVSLAKMAAALECCRRLHQMGELDDQLQP 1200
>gi|321475108|gb|EFX86072.1| hypothetical protein DAPPUDRAFT_309030 [Daphnia pulex]
Length = 1607
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 226/462 (48%), Gaps = 76/462 (16%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHH--EGLLSVKKDRIISNA 494
+LEA+T K EGF +E ET+GDS LK S ++ + EG LS+ + R I+N
Sbjct: 1158 ILEALTLAKTHEGFDMERSETIGDSILKLVISIYVYGETGSDRCDEGRLSLMRMRQINNK 1217
Query: 495 ALCKLGCDHKLPGFIRTEPFD------PKMWMIPGDNSGSYELNDHSLFNERKIYVTGRK 548
L KLG + F + F+ P + P D ++N H ++
Sbjct: 1218 HLFKLGAKKDIGEFTVAQRFELMANFLPPGFKTPTD--PDTDINAHV-----------QQ 1264
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------------DFVNVPY-- 593
V K VAD +EALIG +L+T G + +D +G+K F +P
Sbjct: 1265 YVLMKNVADCMEALIGVYLTTTGIKGAIKLMDWMGLKTVPRLEIATFNEMNGFPILPSTF 1324
Query: 594 ------ERQFQVQAERL----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ 643
+ Q + Q E L + E L Y+F++ +LL+EALTH SY+ I CYQ
Sbjct: 1325 GSSTLNDTQLKDQEEALSQLFAGLESFEKRLRYTFKNKALLIEALTHASYIPNRITNCYQ 1384
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS 703
RLEFLGDAVLDYL+T Y Y+ +P LTD+RSA VNN+ +A+ +V++ H ++ H S
Sbjct: 1385 RLEFLGDAVLDYLVTRYYYDNPCQYTPAILTDLRSAMVNNETFAVMAVQNRFHLYLKHLS 1444
Query: 704 QELYKWINITVDSFER-------LSLESTFGWE----------SETSFPKALGDIIESLS 746
L N+ +D F R L + + F E S PK LGDI ES++
Sbjct: 1445 LSL----NVILDRFVRSQEENGHLLMHNYFVLEETSEPHQSLASNIDVPKVLGDIFESVA 1500
Query: 747 GAIFVDSGCNKEVVFESIRPLLEPMITP--ETMRLQPARELNE-YCQKHHFSMKKTVAPR 803
GAIFVDSG + + V++S P L + E + + R L+E Y F +++A
Sbjct: 1501 GAIFVDSGMSLDAVWKSYLPFLHDALEKFNEKIPISALRVLHERYPNALKFRKSESLA-- 1558
Query: 804 INGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
+G+ V +E+ +FK A + +TAK A+K L L
Sbjct: 1559 -DGRLCVAIEIQGT-RVFK--GAGGNSKTAKSAAAKYALSVL 1596
>gi|392895692|ref|NP_498761.2| Protein DCR-1 [Caenorhabditis elegans]
gi|408360292|sp|P34529.3|DCR1_CAEEL RecName: Full=Endoribonuclease dcr-1
gi|379657006|emb|CCD71200.2| Protein DCR-1 [Caenorhabditis elegans]
Length = 1910
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 224/515 (43%), Gaps = 123/515 (23%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L A+TT +G LE ET+GDSFLK+A + L+ T + HEG LS + + +SN L
Sbjct: 1397 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLLDQHEGKLSFARSKEVSNCNL 1456
Query: 497 CKLG----------------------------CDHKLPG------------------FIR 510
+LG CD K P I
Sbjct: 1457 YRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEIERILDGQVIE 1516
Query: 511 TEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTG------------RKKVKSKTVADV 558
+P + W I GD S S ++ ++ V ++ + K++AD
Sbjct: 1517 EKPENKTGWDIGGDVSKSTTDGIETITFPKQARVGNDDISPLPYNLLTQQHISDKSIADA 1576
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYE---------- 594
VEALIG L T G N L ++ +G+KV F++ P
Sbjct: 1577 VEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTNPNASLNFLNN 1636
Query: 595 --RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 652
+QFQ LE + Y F++ + LV+A TH SY+ + CYQRLEFLGDAV
Sbjct: 1637 LWQQFQFT--------QLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAV 1688
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI 712
LDY+IT YL+ SPG LTD+RSA VNN +A +VK KH + LY I
Sbjct: 1689 LDYMITRYLFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEK 1748
Query: 713 TVDSFERLSLESTFGWE---------------SETSFPKALGDIIESLSGAIFVDSGCNK 757
V + ++ F E + PKA+GDI ES++GAI++DSG N
Sbjct: 1749 FVKLCSERNFDTNFNAEMYMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNL 1808
Query: 758 EVVFESIRPLLEPMIT------PETMRLQPARELNEYCQ-KHHFSMKKTVAPRINGKAAV 810
+ ++ I ++ I P + P REL E+ Q K FS + + +GK V
Sbjct: 1809 DTTWQVIFHMMRGTIELCCANPPRS----PIRELMEFEQSKVRFSKMERILE--SGKVRV 1862
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
TVEV N + T + AK A+K LK L
Sbjct: 1863 TVEVVNN---MRFTGMGRNYRIAKATAAKRALKYL 1894
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 50 LYLPNNCPIQTVIA----QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
L LP N PI+ I N KT + LEAC++LH G L DNLLP
Sbjct: 611 LLLPINSPIKHAIVLKNPMPNKKTAQMAVALEACRQLHLEGELDDNLLP 659
>gi|268576156|ref|XP_002643058.1| C. briggsae CBR-DCR-1 protein [Caenorhabditis briggsae]
Length = 1863
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 228/524 (43%), Gaps = 109/524 (20%)
Query: 422 LLDHCMQNVTIPTSK--VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHH 479
++ H ++V + S +L A+TT +G LE ET+GDSFLK+A + L+ T Q H
Sbjct: 1334 IVSHTDEDVGMGVSPCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQEQH 1393
Query: 480 EGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP-KMWMIP---------GDNSGSY 529
EG LS + + +SN L +LG +P I FD W+ P N+
Sbjct: 1394 EGKLSWARSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNTSDA 1453
Query: 530 ELNDHSLF----------------------NERKIYVTG--------------------- 546
E D + +E K V G
Sbjct: 1454 EEKDKEMERILSGQTIEEKPENKTGWDLGQDEAKKTVDGIETITFQKQTRILNEDITPLP 1513
Query: 547 -----RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV--------------D 587
++ + K +AD +EALIG L T G N L ++ +G+KV
Sbjct: 1514 YNLLTQQNISDKAIADAMEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQATDVQPPLLR 1573
Query: 588 FVNVPYERQFQVQA----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ 643
F++ P +A + LE + Y F+D + LV+A TH SY+ + CYQ
Sbjct: 1574 FIDTPINPDASTKALDNLWQQFQFAQLEEKIGYRFKDRAYLVQAFTHASYINNRVTGCYQ 1633
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS 703
RLEFLGDAVLDY+IT YL+ SPG LTD+RSA VNN +A +VK KH +
Sbjct: 1634 RLEFLGDAVLDYMITRYLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMC 1693
Query: 704 QELYKWINITVDSFERLSLESTFGWE---------------SETSFPKALGDIIESLSGA 748
L+ I V S ++ F E + PKALGD+ ES++GA
Sbjct: 1694 PGLHHMIEKFVKLCGDRSFDTNFNTEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGA 1753
Query: 749 IFVDSGCNKEVVFESIRPLLEPMIT------PETMRLQPARELNEY-CQKHHFSMKKTVA 801
I++DSG N + ++ I L++ I P + P REL E K FS + +
Sbjct: 1754 IYLDSGRNLDTTWQVIYHLMKGTIETCCANPPRS----PIRELMELEGTKARFSKMERIL 1809
Query: 802 PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
+GK VTV+V G + T + AK A+K LK L
Sbjct: 1810 E--SGKVRVTVDV---GNNMRFTGMGRNYRIAKATAAKRALKYL 1848
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 24/117 (20%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR----------------YFKPTPKFDINKEM 45
FD + S++QS+GRAR S Y++++ + P + ++
Sbjct: 479 FDRPLDMRSYVQSKGRARKPGSTYVVLVDQKDVTAYCSKLPSDIFTRLVPHSRIIPVEDR 538
Query: 46 GI----CTLYLPNNCPIQTVI----AQGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
G+ L LP N PI+ I A N K + LEAC++LH G L DNLLP
Sbjct: 539 GVTKYCAELLLPINSPIKHAIILKDAMPNKKIAQMAVALEACRQLHLKGELDDNLLP 595
>gi|308485595|ref|XP_003104996.1| CRE-DCR-1 protein [Caenorhabditis remanei]
gi|308257317|gb|EFP01270.1| CRE-DCR-1 protein [Caenorhabditis remanei]
Length = 1941
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 231/523 (44%), Gaps = 101/523 (19%)
Query: 419 KNMLLDHCMQNVTIPTSK--VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
+N + H ++V + S +L A+TT +G LE ET+GDSFLK+A + L+ T Q
Sbjct: 1408 ENETVSHIDEDVGMGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQ 1467
Query: 477 NHHEGLLSVKKDRIISNAALCKLG----------------------------CDHKLPG- 507
+ HEG LS + + +SN L +LG CD K P
Sbjct: 1468 DQHEGKLSFARSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNN 1527
Query: 508 -----------------FIRTEPFDPKMWMIPGDNS-----GSYELN---DHSLFNER-- 540
I +P D W I GD + G +N L NE
Sbjct: 1528 SDAEEKDKEIERILNGQTIEEKPEDKTGWDIGGDTAKSTADGIETINFPKQSRLLNEDIS 1587
Query: 541 --KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------ 586
+ ++ + K++AD +EALIG L T G N L + +G+KV
Sbjct: 1588 PLPYNLLTQQNISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKDAKTEVAHP 1647
Query: 587 --DFVNVPYERQFQVQA----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 640
F++ P ++A + +LE + Y F++ + LV+A TH SY+ +
Sbjct: 1648 LLRFIDTPANPDASLKALNNLWQQYQFANLEERIGYRFKERAYLVQAFTHASYINNRVTG 1707
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
CYQRLEFLGDAVLDY+IT YL+ SPG LTD+RSA VNN +A +VK KH +
Sbjct: 1708 CYQRLEFLGDAVLDYMITRYLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFI 1767
Query: 701 HASQELYKWINITVDSFERLSLESTFGWE---------------SETSFPKALGDIIESL 745
L+ I V + ++ F E + PKALGD+ ES+
Sbjct: 1768 AMCPGLHHMIEKFVKLCADRNFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESV 1827
Query: 746 SGAIFVDSGCNKEVVFESIRPLLEPMITP--ETMRLQPARELNEY-CQKHHFSMKKTVAP 802
+GAI++DSG N + ++ + ++ I P REL E K FS + +
Sbjct: 1828 AGAIYLDSGRNLDTTWQVLFHMMRSTIDSCCANPPRSPIRELMELEASKARFSKMERILE 1887
Query: 803 RINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
+GK VTV+V G + T + AK A+K LK L
Sbjct: 1888 --SGKVRVTVDV---GNNMRFTGMGRNYRIAKATAAKRALKYL 1925
>gi|157167186|ref|XP_001652212.1| dicer-1 [Aedes aegypti]
gi|108877338|gb|EAT41563.1| AAEL006794-PA [Aedes aegypti]
Length = 1658
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/429 (32%), Positives = 204/429 (47%), Gaps = 69/429 (16%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
NV + +++A+TTK + F LE E LGD+FLK++ S L K ++ HEG L+ K
Sbjct: 1167 NVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKYHKEWHEGFLTAVKG 1226
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPK------MWMIPGDNSGSYELNDHS------- 535
+I+SN L + LPG ++ FDPK + +P + + + +HS
Sbjct: 1227 QIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPPLATVPKNIKRTMQSVNHSARVLYRL 1286
Query: 536 LFNERKI---YVTGR---------------------------KKVKSKTVADVVEALIGA 565
E +I VT + + + KT AD +EAL+G
Sbjct: 1287 TLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMGDKTPADAMEALLGV 1346
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-------------NVRHLES 612
+ + G L GI NV +++ +RL N R +ES
Sbjct: 1347 CVQSVGIERSFKLLPHFGILPKTHNVLKLLADKIENQRLKTHIDIREVDAFLKNYRRIES 1406
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + PT+SPG
Sbjct: 1407 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1466
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-----------DSFERLS 721
LTD+RSA VNN A V+HGLH +IL S ++ V D L
Sbjct: 1467 LTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVLFQEQNKHEITDQVNLLV 1526
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL--EPMITPETMRL 779
ES PKALGD+ ESL A+F+DSG + ++ I ++ E + E +
Sbjct: 1527 EESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVIYGMMGNEILTFTENTPI 1586
Query: 780 QPARELNEY 788
Q R+L E+
Sbjct: 1587 QIVRQLYEF 1595
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 157/754 (20%), Positives = 297/754 (39%), Gaps = 133/754 (17%)
Query: 11 FIQSRGRARMQNSDYLLMLKRYFKPTPK------------FDINKEMGICTLYLPNNCPI 58
F ++G A++ + +L RY P+ D+ I + LP +
Sbjct: 554 FFTAKG-AKLDALSAIQLLNRYCMGMPRDAFTNTNVTWERIDLKDGRIIVEVLLPLQSTV 612
Query: 59 QTVIAQG---NIKTLKQTACLEACKKLHQIGALTDNLLP-----------DVVV---EEH 101
+ I+ NIK K++A AC+KL++ L ++L+P DV ++
Sbjct: 613 REKISGNPMRNIKLAKRSAAFNACRKLYENKELNEHLIPIDCKYQLNNLKDVYFRHWKDF 672
Query: 102 DA---QKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLA 158
DA + G + H I +P + PQ K Y Y++ + F D P +D V
Sbjct: 673 DADLGKLAGTQKCIRTHAIQYPKQTTECFPQPGKPCY-IYVLRIAAGFAQD-PTNDNVNI 730
Query: 159 VRTELESEIKKVNFDL-------EVDRGRLTVNLKHLG-KIQLTPD---------KVLLC 201
+ SE NF L + + + V L + I+ TP ++ L
Sbjct: 731 FHSLYSSE---NNFGLMTTKPLPALAKMKFFVTLGLINVHIEETPIVLPNGGSEIELALL 787
Query: 202 RRFQIALFRVIMDHNLDKLNEILKGLWLR------DNLEIDYLLLPASEQS-IDWEPVAS 254
R+F + +FR ++LK LW DN E +L++P + +DW+ +
Sbjct: 788 RQFHVTVFR-----------DVLK-LWKEFLCCDYDNEENSFLVVPLKNSTHLDWKLI-- 833
Query: 255 LSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP----HSGQIYYITGVL 310
+ +N S + ++ Y V P + Q Y +T V
Sbjct: 834 ---------REFQNLSEPPSEISTIARNKMEFEADKYRHKVILPWYKNNKEQPYVVTMVH 884
Query: 311 GHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQR 370
HL S F + G +Y ++ + Y + + + L+ + I N L+ ++ +
Sbjct: 885 EHLTPESPFPNPEYG--SYANYFSQAYHLAVVKPDQFLIEVKGITSYLNRLNPGVEDDGK 942
Query: 371 EPSKISFE----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH- 425
+ L PELC P + T +PS +HRL LLLA N++ L
Sbjct: 943 STRSKHWRFNEILIPELCHNYQFPADY--WLKATLLPSALHRLHYLLLAENIRVDLATGA 1000
Query: 426 ---CMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
C++N TI V K ++G LE L+ + + + + + L
Sbjct: 1001 NVGCLENHTIEDVDV-----EYKERKGKQLEELQLMEFEEDEDEDDEFDLEEAK---RSL 1052
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD-PKMWMIPGDNSGSYELNDHSLFNERK 541
++ + ++ +C + D LP EP D + W D +L+ +++F +
Sbjct: 1053 VAPENLSELARNQMCSITGDIPLPWQEDEEPVDIERNW----DQVSKLDLDYYNVFVNKF 1108
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQA 601
++ R+K + +++ + + + + + LD VP +++F ++
Sbjct: 1109 SDLSMREKAAER-ISNAYTSAVYRRAAGSPKREAMAILD----------VPVDQKFAIKL 1157
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+L + +N + + +++ T S + ++ +R E LGDA L + I++YL
Sbjct: 1158 LQLTPA----NTVNVNLQQKNIIKALTTKSSSDVFDL----ERYELLGDAFLKFSISLYL 1209
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
+ G LT ++ V+N ++K+GL
Sbjct: 1210 VKYHKEWHEGFLTAVKGQIVSNRNLVYCAIKYGL 1243
>gi|57236096|gb|AAW48725.1| dicer-2 [Aedes aegypti]
Length = 1658
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 203/429 (47%), Gaps = 69/429 (16%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
NV + +++A+TTK + F LE E LGD+FLK++ S L K ++ HEG L+ K
Sbjct: 1167 NVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKYHKEWHEGFLTAVKG 1226
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPK------MWMIPGDNSGSYELNDHS------- 535
+I+SN L + LPG ++ FDPK + +P + + + +HS
Sbjct: 1227 QIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPPLATVPKNIKRTMQSVNHSARVLYRL 1286
Query: 536 LFNERKI---YVTGR---------------------------KKVKSKTVADVVEALIGA 565
E +I VT + + + KT AD +EAL+G
Sbjct: 1287 TLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMGDKTPADAMEALLGV 1346
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-------------NVRHLES 612
+ + G L GI NV +++ +RL N R +E
Sbjct: 1347 CVQSVGIERSFKLLPHFGILPKTHNVLRLLADKIENQRLKTHIDIREVDAFLKNYRRIEG 1406
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + PT+SPG
Sbjct: 1407 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1466
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-----------DSFERLS 721
LTD+RSA VNN A V+HGLH +IL S ++ V D L
Sbjct: 1467 LTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVLFQEQHKHEITDQVNLLV 1526
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL--EPMITPETMRL 779
ES PKALGD+ ESL A+F+DSG + ++ I ++ E + E +
Sbjct: 1527 EESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVIYGMMGNEILTFTENTPI 1586
Query: 780 QPARELNEY 788
Q R+L E+
Sbjct: 1587 QIVRQLYEF 1595
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 159/755 (21%), Positives = 296/755 (39%), Gaps = 135/755 (17%)
Query: 11 FIQSRGRARMQNSDYLLMLKRYFKPTPK------------FDINKEMGICTLYLPNNCPI 58
F ++G A++ + +L RY P+ D+ I + LP +
Sbjct: 554 FFTAKG-AKLDALSAIQLLNRYCMGMPRDAFTNTNVTWERIDLKDGRIIVEVLLPLQSTV 612
Query: 59 QTVIAQG---NIKTLKQTACLEACKKLHQIGALTDNLLP-----------DVVV---EEH 101
+ I+ NIK K++A AC+KL++ L ++L+P DV ++
Sbjct: 613 REKISGNPMRNIKLAKRSAAFNACRKLYENKELNEHLIPIDCKYQLNNLKDVYFRHWKDF 672
Query: 102 DA---QKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLA 158
DA + G + H I +P + PQ K Y Y++ + F D P +D V
Sbjct: 673 DADLGKLAGTQKCIRTHAIQYPKQTTECFPQPGKPCY-IYVLRIAAGFAQD-PTNDNVNI 730
Query: 159 VRTELESEIKKVNFDL-------EVDRGRLTVNLKHLG-KIQLTPD---------KVLLC 201
+ SE NF L + + + V L + I+ TP ++ L
Sbjct: 731 FHSLYSSE---NNFGLMTTKPLPALAKMKFFVTLGLINVHIEETPIVLPNGGSEIELALL 787
Query: 202 RRFQIALFRVIMDHNLDKLNEILKGLWLR------DNLEIDYLLLPASEQS-IDWEPVAS 254
R+F + +FR ++LK LW DN E +L++P + +DW+ +
Sbjct: 788 RQFHVTVFR-----------DVLK-LWKEFLCCDYDNEENSFLVVPLKNSTHLDWKLI-- 833
Query: 255 LSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP----HSGQIYYITGVL 310
+ +N S + ++ Y V P + Q Y +T V
Sbjct: 834 ---------REFQNLSEPPSEISTIARNKMEFEADKYRHKVILPWYKNNKEQPYVVTMVH 884
Query: 311 GHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQR 370
HL S F + G +Y ++ + Y + + + L+ + I N L+ ++ +
Sbjct: 885 EHLTPESPFPNPEYG--SYANYFSQAYHLAVVKPDQFLIEVKGITSYLNRLNPGVEDDGK 942
Query: 371 EPSKISFE----LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH- 425
+ L PELC P + T +PS +HRL LLLA N++ L
Sbjct: 943 STRSKHWRFNEILIPELCHNYQFPADY--WLKATLLPSALHRLHYLLLAENIRVDLATGA 1000
Query: 426 ---CMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
C++N TI V K ++G LE L+ + + + + + L
Sbjct: 1001 NVGCLENHTIEDVDV-----EYKERKGKQLEELQLMEFEEDEDEDDEFDLEEAK---RSL 1052
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD-PKMWMIPGDNSGSYELNDHSLFNERK 541
++ + ++ +C + D LP EP D + W D +L+ +++F +
Sbjct: 1053 VAPENLSELARNQMCSITGDIPLPWQEDEEPVDIERNW----DQVSKLDLDYYNVFVNKF 1108
Query: 542 IYVTGRKKVKSKTVADVVEALIG-AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ 600
++ R+K + A+ A S E + ++ +VP +++F ++
Sbjct: 1109 SDLSMREKAAERISTAYTSAVYRRAAGSPKREPMAIL------------DVPVDQKFAIK 1156
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
+L + +N + + +++ T S + ++ +R E LGDA L + I++Y
Sbjct: 1157 LLQLTPA----NTVNVNLQQKNIIKALTTKSSSDVFDL----ERYELLGDAFLKFSISLY 1208
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
L + G LT ++ V+N ++K+GL
Sbjct: 1209 LVKYHKEWHEGFLTAVKGQIVSNRNLVYCAIKYGL 1243
>gi|283827860|gb|ADB44075.1| dicer-1 [Marsupenaeus japonicus]
Length = 2482
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 227/532 (42%), Gaps = 151/532 (28%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY HEG LS + + +SN
Sbjct: 1972 SVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNL 2031
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP---------------GDNSGSYELND----- 533
L +LG L + F+P W+ P G +G + + D
Sbjct: 2032 NLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLH 2091
Query: 534 -------HSLFNERKIYVTGRK-----------------------------KVKSKTVAD 557
L ER + K + K++AD
Sbjct: 2092 DLASDEIRRLVQERSEQIKRSKNEQATSELMATQNPHDLPIFIPYNLLTQHSIPDKSIAD 2151
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLES----- 612
VEALIGA+L+T G L+F+ +GIKV +P + + +L+ HLES
Sbjct: 2152 CVEALIGAYLTTCGPRGALLFMSWLGIKV----LPCTLEDSPETGQLIIYGHLESPQSPL 2207
Query: 613 ------------------------LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 648
+ Y+F+D S L++A TH SY + CYQRLEFL
Sbjct: 2208 YHCPLTDTKKELDLLLSGYQVFEEKIGYTFQDRSYLLQAFTHASYYKNRLTDCYQRLEFL 2267
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYK 708
GDAVLDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ H S L +
Sbjct: 2268 GDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDR 2327
Query: 709 WINITVDSFERLSLESTFGWESETSF--------------PKALGDIIESLSGAIFVDSG 754
I F ++ E+ E F PKALGD+ ES++GAIF+DSG
Sbjct: 2328 VIR----DFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSG 2383
Query: 755 CNKEVVF--------------------ESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
+ + V+ IR LLE + PET + L
Sbjct: 2384 SSLDAVWSVYYTMMCREIEQFSGVVPKSPIRELLE--MEPETAKFGKPERL--------- 2432
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++GK V+VE+ G+ + + AK A+K L+ LK
Sbjct: 2433 ---------VDGKVRVSVEIFGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2472
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 165/424 (38%), Gaps = 70/424 (16%)
Query: 48 CTLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQ 104
C + LP N P++ I Q + K A LE C++LHQ+G L D+ L V E
Sbjct: 1160 CKIMLPINSPLKGTIEGPWQDKVSLAKMAAALECCRRLHQMGEL-DDQLQPVGKESMKLD 1218
Query: 105 KH-GNEPYDAEHPIYFP-PELVNQCPQDTKITYHCYLIEL-KQNFNYDIPAHDIVLA--V 159
H P D + P P P + K C E KQ + + D+VL +
Sbjct: 1219 DHLCAPPADDQVPEGMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLDLFVYKLDMVLTCPI 1278
Query: 160 RTELESEIKKV----------------------NFDLEVDRGRLTVNLKHLG-KIQLTPD 196
E + +K+ F + G + V+++ + K+ +T D
Sbjct: 1279 PDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIERKVNVTQD 1338
Query: 197 KVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLS 256
++ + F F ++ L+K R I L +SIDWE V +
Sbjct: 1339 QLSALQYFHKFTFTHVL--RLEKYPIKFDPTNARTAFYIVPLNKFNGSESIDWEFVKEIQ 1396
Query: 257 FPCDIGLKHHKNCSTMSNARV-VQTKSGPLCTCMIYNSVVCTP-----HSGQIYYITGVL 310
D + +AR Q + +Y V P Q +Y+ +
Sbjct: 1397 SEGD-----PRPVPPQDDARKKFQFQHD------LYEDAVVMPWYRNQDQPQYFYVAEIC 1445
Query: 311 GHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN-----GR----------RIF 355
HLN S F D G T++K+Y +YG+Q+C + LL+ GR R
Sbjct: 1446 THLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKG 1503
Query: 356 HAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA 415
A S+ + +RE + L PELC I P SL + +P+I++R+ +LLLA
Sbjct: 1504 VALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTILYRINALLLA 1561
Query: 416 VNLK 419
L+
Sbjct: 1562 DQLR 1565
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
LLN+ PS++++ALT + +RLE +GD+ L Y IT +LY YP G
Sbjct: 1963 LLNHPGPSPSVILQALTMSN---ANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGK 2019
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 2020 LSYLRSKQVSN 2030
>gi|403418950|emb|CCM05650.1| predicted protein [Fibroporia radiculosa]
Length = 1373
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 223/486 (45%), Gaps = 68/486 (13%)
Query: 357 AQNYLSKCRQ---EKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
A NYL+ + + + P K L PELC P S TF + VPSI+HR+ L
Sbjct: 801 AINYLNPVLRPLLQSSKAPPKY---LIPELCAKFTIPAS--TFRTMLLVPSILHRIDHQL 855
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
L L H TI ++ A+T F E LE GD+FLKY AS F
Sbjct: 856 LVKELNAHFFQH-----TILEEHLIAALTPPSASVAFDYERLELFGDAFLKYVASIYCFV 910
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMI---------PGD 524
T + EG L + + +IISN AL LP +I+++PF K W P +
Sbjct: 911 TTPHVREGALHMARQKIISNKALLTGANRIGLPPYIQSKPFVAKTWTPITSPHSSRDPIN 970
Query: 525 NSGSYELNDHSLFNERKIYVTGRKKVK-------------SKTVADVVEALIGAFLSTGG 571
+ + ND + I T ++ K KTVADVVEA+IGA +GG
Sbjct: 971 DQKAVHYNDAVAGDTSAIQTTSKRSKKQKQQDEQNIQWLGDKTVADVVEAIIGAAYLSGG 1030
Query: 572 ENVGLIFLDRIGIKVDFVNVP-------YERQFQVQAER------LVNVRHLESLLNYSF 618
+ + L + KV VN+P + R F Q VR +E+++ F
Sbjct: 1031 QRIALQTM-----KVLSVNIPGVEQWSDFSRLFTSQTSPSTVPLPTATVRAVETIVGNVF 1085
Query: 619 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
P LL +ALTH S + R Y RLEF+GDAVLD+L+ ++Y++ P LSP LT ++S
Sbjct: 1086 ARPQLLAQALTHTSIGAHD-DRTYDRLEFVGDAVLDFLVVQFIYDRNPGLSPNGLTLLKS 1144
Query: 679 ASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF---- 734
A V+N A V GLH H+ HA+ E+ + + V + + +SE
Sbjct: 1145 AMVSNHALAAFCVHSGLHIHLRHAAPEVGTAVQVYVRKLGEVREKEYRLAQSERRLPGQY 1204
Query: 735 ------PKALGDIIESLSGAIFVDSGCNKEVV---FE-SIRPLLEPMITPETMRLQPARE 784
PK L D++ES+ GA+++ + V F+ +I+P E I +++ P
Sbjct: 1205 WLALDPPKTLSDVVESVIGALYISDDFQETSVRAFFDGTIKPFYEYHIRLQSLCPHPTTT 1264
Query: 785 LNEYCQ 790
L E Q
Sbjct: 1265 LFELLQ 1270
>gi|115292171|emb|CAK32533.1| putative dicer-like protein [Mucor circinelloides]
Length = 1529
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 253/513 (49%), Gaps = 61/513 (11%)
Query: 325 GAITYKKHYEERYGI--QLCFDQELLLNGRRIFHAQNYL----SKCRQEKQREPSKISFE 378
G T+K +YE++ + ++ + L+ R+ Q++ S +++ REP +
Sbjct: 952 GYATFKDYYEDQEFLSKKITDMAQPLIQVHRVPKNQSFRQVRGSSMMKKRDREPESVVHW 1011
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNML-LDHCMQNVTIPTSKV 437
L PELC + P+S S + + VP IM + ++LL + K L L M++ +
Sbjct: 1012 LVPELC--LQYPISASVYQTLQLVPDIMMHIDAVLLMHDAKKALGLSGRMKD-----PYM 1064
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
LEA T + LE LGDS LK+ S +F T +E L+ + R+ISN AL
Sbjct: 1065 LEAFTASSAGLEKDYQRLEFLGDSVLKFITSTYVFVTLPISNEFELTESRMRMISNTALF 1124
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
K +L +I ++ + + P +Y D S I K+ KT+AD
Sbjct: 1125 KSAIQLRLYEYICSQNLPRRFYRPP-----NYLCKDDS---AEMIKSLTYHKLSDKTLAD 1176
Query: 558 VVEALIGA-FLSTGGE--------NVGLIFLDRIGIKV-------DFVNVPYE----RQF 597
VVE+ +GA +LS G+ N L R+ + + DF + + +Q
Sbjct: 1177 VVESTLGASYLSCLGDKKQGDQALNEALHTTQRLLVPMQKMEQWSDFQTIYRDERDNKQL 1236
Query: 598 QVQA-----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 652
++ A ++ ++++ + +L Y F++ +L+ EALTH S +P CYQRLEFLGDAV
Sbjct: 1237 KMAAYDPLFDQRIDIKKVSRILGYEFQNEALIAEALTHASVTNSSVP-CYQRLEFLGDAV 1295
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI 712
LD+ +T YL+ KY T PG L D+R +SVNND ++ ++ GLH HI H S
Sbjct: 1296 LDFCVTNYLFEKYHTAPPGTLHDLRKSSVNNDILSVLCIQLGLHVHIRHFSTTFPS---- 1351
Query: 713 TVDSFERLSLEST-FGWESETSF--PKALGDIIESLSGAIFVDSGCNKEVVF----ESIR 765
V F+ L + S E +F PK L D++ESL GA+FVD+G N + V ++
Sbjct: 1352 AVKQFQELVVASQDEKGEYWLNFNPPKVLSDVVESLIGAVFVDAGFNLDPVLGLFDRLLK 1411
Query: 766 PLLEPMITPETMRLQPARELNEYCQKHHFSMKK 798
PLL+ I+ E M+ P +L C F K+
Sbjct: 1412 PLLDDHISIEAMQQHPLGKLK--CMVQEFGCKQ 1442
>gi|353236820|emb|CCA68807.1| hypothetical protein PIIN_02669 [Piriformospora indica DSM 11827]
Length = 1466
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 228/478 (47%), Gaps = 75/478 (15%)
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEA 440
PELC P S T + + +PSIM R++ LL L M N I S + A
Sbjct: 896 PELCSKFTIPAS--TMRTLSLLPSIMKRVEDTLLVRELNAMYF-----NNEIDESALQAA 948
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
IT E LE LGD++LKY +S LF T N HEG+L + + +IISN AL
Sbjct: 949 ITAPSASMEVDYERLELLGDAYLKYLSSIYLFVTNPNKHEGILHLARQKIISNRALLVNA 1008
Query: 501 CDHKLPGFIRTEPFDPKMWMIPG------------------------------------- 523
LP +I+++PF PKMW+ G
Sbjct: 1009 DKSGLPQYIQSKPFLPKMWLPRGYTVVRPEPKSTATHKESRGNTNMEIKEERSSPDPNGL 1068
Query: 524 ------DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI 577
D S + + ++ L +++ +Y + + K VADV EA+IGA TGG ++GL
Sbjct: 1069 PTSANEDKSLTIKADEQKLKSKKSLYDEDHQWLGDKCVADVAEAIIGAAFQTGGPSLGLK 1128
Query: 578 FLDRIGIKVDFVNVPYERQFQVQA---------ERLVNVRHLESLLNYSFRDPSLLVEAL 628
+ + + + F+ + + +A E V + +E+ + F P +L +AL
Sbjct: 1129 VVKSLHLPLPFIESWDDFSLKAKAPPPDLTITLEDNV-LETVEATVGAKFHRPHILAQAL 1187
Query: 629 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL 688
TH S ++ CY+RLEFLGDAVLD+L+ ++++ + L+PG LT ++ A V+N A
Sbjct: 1188 THTSARGNDM-TCYERLEFLGDAVLDFLVIQHIFDLHGRLTPGALTMLKGAMVSNSALAA 1246
Query: 689 SSVKHGLHKHILHASQELYKWINITVDSF-ERLSLESTFGWES---------ETSFPKAL 738
SV +GLHK ++ S+ + K I+ V + E+ LE E E PK++
Sbjct: 1247 ISVHYGLHKFLVVESKNVKKAIDEYVPAVEEKQRLEYAAADEEGRLKGQYWLEVEPPKSV 1306
Query: 739 GDIIESLSGAIFVDSG---CNKEVVFES-IRPLLEPMITPETMRLQPARELNEYCQKH 792
D++ES+ GA++V G + ++++ +RP + I+ +T+ P + L E Q
Sbjct: 1307 ADVVESILGALYVSDGFKLTGAQAMYDTLLRPFYDQHISLKTLSHHPTKILFELFQSQ 1364
>gi|195997771|ref|XP_002108754.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
gi|190589530|gb|EDV29552.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
Length = 1018
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 233/474 (49%), Gaps = 67/474 (14%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R + SKI+ EL PELC+ +S S + T +PS + R+++LLLA LK++L
Sbjct: 552 RNTQSETSSKIT-ELIPELCKRYF--LSASVWKVITCIPSFLWRMETLLLAHELKDVLFG 608
Query: 425 HC-MQNVTIP-----TSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNH 478
+ ++I T K+LEA+T + ++ LE LE LGDSFLK+ + LF ++ +
Sbjct: 609 SIPINGISISKNQTFTLKLLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKY 668
Query: 479 HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD---PKMWMIPGD---NSGSYELN 532
HEG L+ + +I+ N L KLG + +I +PF+ + W+ PG +S L+
Sbjct: 669 HEGQLTNELTKIVRNDNLLKLGKSTPICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLD 728
Query: 533 DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF---- 588
+ + +K SK++ADV++A++ A L E F+ + + F
Sbjct: 729 EKVTSDLDGDKAVTHQKFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINA 788
Query: 589 ----------------VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS 632
+N YE N+ LE ++ YSF++ ++ ALTH S
Sbjct: 789 SAASLLPDDDNISSNEINKIYETN---------NLERLEKVIGYSFQNKLFMIRALTHSS 839
Query: 633 YMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSV 691
Y +I Q+LEFLGD +L Y+I + +N +P P L D + A VNN C A+ +
Sbjct: 840 YHHHDIAIESNQKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGI 899
Query: 692 KHGLHKHILHASQELYKWINITVDSFERL---------------SLESTF-GWESETSFP 735
G+ K++ S +L++ +D F ++ E+ F + E P
Sbjct: 900 AIGVSKYVFQESPDLFR----DIDQFAKIITCDYMIDDEMNYNDRTEALFENFTEEVKIP 955
Query: 736 KALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNE 787
K + D++E+L GAI++D+G + V +++ PLL+P I+ + + P R+L E
Sbjct: 956 KPVSDVVEALIGAIYIDTGESIAEVTKALMPLLQPRISLVLRDIPISPIRQLYE 1009
>gi|321458470|gb|EFX69538.1| hypothetical protein DAPPUDRAFT_329028 [Daphnia pulex]
Length = 1597
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 233/478 (48%), Gaps = 48/478 (10%)
Query: 408 RLQSLLLAVNLK--NMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKY 465
R S AVN + + +D+C + + +VL A+TT G+ LE LE +GDSFLK
Sbjct: 1126 RNSSAAFAVNFRFDDGPMDNCPKGPS--PGEVLRALTTSVANAGYDLERLEVIGDSFLKL 1183
Query: 466 AASQQLFKTYQNH-HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
AAS +++ +H HEG ++ + + N L KLG +P F+ F K W+ P
Sbjct: 1184 AASIRVYCDSPSHFHEGKMTHLRMLQVCNRNLFKLGKIKSIPRFVVATKFVAKENWLPPC 1243
Query: 524 DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
+ + + L + K +++ K+VAD VEAL G +L+ G L + +G
Sbjct: 1244 YFPNNTDDDCMELETDEKPNAKLWQRISKKSVADSVEALFGLYLTLHGIKGALKVMRWMG 1303
Query: 584 IKVD-----------------------FVNVPYERQFQVQAERLVNVRHLESLLNYSFRD 620
+ V ++ P + + + L LE LN+ F +
Sbjct: 1304 VNVPDSSGDEDSSSSSSSFGGTPPEPLLLDSPQAKH--LLDDHLAGFETLERSLNFRFGN 1361
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYPTLSPGDLTDMRSA 679
L++A +H SY + CYQRLEFLGDAV DYLIT YLY+ + L+PG L+DMRSA
Sbjct: 1362 RFYLLQAFSHASYHHNRMTSCYQRLEFLGDAVFDYLITKYLYDCRLFQLTPGALSDMRSA 1421
Query: 680 SVNNDCYALSSVKHGLHKHILHASQELYKWIN-----------ITVDSFERLSLESTFGW 728
VNN +A+ +V++G H+++ H ++++ I+ T D F +
Sbjct: 1422 LVNNVTFAVLAVRNGFHRYLKHLVPDVHQAIDRFVQQQEMCDHATPDEFFLIGTHDDPMA 1481
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEY 788
E+ PK LGDI ESL GA+F+DS + + V+ PL+ I T R+ P +
Sbjct: 1482 EA-VEVPKVLGDIFESLVGAVFLDSDMSLDAVWRVFYPLIRQEIEACT-RVVPKSPIRTI 1539
Query: 789 CQKHHFSMK-KTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
+K+ ++ KT+ +G+ + VEV NG L+K ++ AK A+K L L
Sbjct: 1540 YEKYPGKVQFKTLENLPDGRICIAVEVLNNGRLYKGVGKNS--RIAKNTAAKYALSQL 1595
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 180/441 (40%), Gaps = 65/441 (14%)
Query: 48 CTLYLPNNCPIQTVI---AQGNIKTLKQTACLEACKKLHQIGALTD-NLLP---DVVVEE 100
CTL LP NCP++ + + + KQ L+AC +LHQ+G L D +L+P VV +
Sbjct: 639 CTLLLPLNCPLRDELIGRVMPSKRLAKQEVSLQACIRLHQLGELDDQHLMPLSKSVVETD 698
Query: 101 HDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT-YHCYLIELKQNFNYDIPAH--DIVL 157
+A + ++ F V + + ++ YL+ + + P + D
Sbjct: 699 ENADVDFDCQFEHSQGSDFYLRGVARLLDGVIASPFYLYLLTYEVVKDSAQPENQFDPNR 758
Query: 158 AVRTE--LESE-IKKVN-FDLEVDRGRLTVNLKHLGK-IQLTPDKVLLCRRFQIALFRVI 212
A R L S+ + VN F L G++ V + ++LT D V LC RFQ LF I
Sbjct: 759 AQRRMGFLSSQKLPAVNPFGLYSPAGQINVGFLEVDSFLRLTLDDVKLCHRFQQFLFEKI 818
Query: 213 MDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTM 272
+ ++ +G YL++P + ID VA ++ D ST+
Sbjct: 819 LQLPGEEQYNPSRG---------SYLVVPITNNRID---VAFMNEHLD---------STV 857
Query: 273 SNARVVQTKSGPLCTCM----IYNSVVCTPHSGQI------YYITGVLGHLNANSLFTRN 322
+ + S + +Y V T H Q YY+ V + S F
Sbjct: 858 PDWQPHPPSSLSSSQVVDYFKVYGDAVVTAHHDQTKGKSSCYYVNAVRPEVTPLSRFP-- 915
Query: 323 DGGAITYKKHYEERY-GIQLCFDQELLLNGRRIFHAQNYLSK---CRQEKQREPSKISFE 378
+ TY ++ +R+ I Q LL + F N+L+ R+E E
Sbjct: 916 NPAYATYANYFRDRHNAIIANLSQPLLEVRKESFKTFNFLTPKYVNRKEAADEGDGEIQS 975
Query: 379 LP-------PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
LP PE C + P S+ + ++PSI +RL SLLLA L+ + ++
Sbjct: 976 LPKGSIYFVPEFCEVHRFPASM--WRQAVWIPSIFYRLNSLLLADELRMEIQAKTGLGLS 1033
Query: 432 IPTSKV----LEAITTKKCQE 448
+ + L+ T+ KCQ+
Sbjct: 1034 VLPPNLQWEPLQMKTSGKCQQ 1054
>gi|339239929|ref|XP_003375890.1| putative RNase3 domain protein [Trichinella spiralis]
gi|316975421|gb|EFV58865.1| putative RNase3 domain protein [Trichinella spiralis]
Length = 1903
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 224/518 (43%), Gaps = 131/518 (25%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
+VL AIT E F+LE LE LGDSFLKY + +K Y HEG LS+ + R+ISN
Sbjct: 1402 EVLHAITASAVAETFNLEGLEILGDSFLKYVTTVYCYKAYSKMHEGKLSLLRSRMISNYN 1461
Query: 496 LCKLGCDHKLPGFIRTEPFDPK-MWMIP---------GDNSGSYE--------LNDHSLF 537
L KLG +P ++ FDP W+ P D + E +ND S+
Sbjct: 1462 LYKLGKRKNIPQYMIAIKFDPSDTWLPPCYVPLNCEVQDTAIEEEDKLMEQRLMNDESVV 1521
Query: 538 -NERKIYVTGRKK---------------------------VKSKTVADVVEALIGAFLST 569
+R + TGR+ + K VAD VEALIGA+L
Sbjct: 1522 EQQRNVETTGRQATTGSKSTKWVPEDLSQLVPFNLLAQQGISDKGVADCVEALIGAYLLF 1581
Query: 570 GGENVGLIFLDRIGIKVD-------------------FVNVPYERQFQVQAERLVN---- 606
G L FL +G+KV+ F N + V L+N
Sbjct: 1582 CGTRRTLDFLHWLGLKVEDEVSLRGFSRCIVSPTPISFANFDL---YGVTKSALINNSAD 1638
Query: 607 -------------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+ E ++ Y F+D SLLV+ALTH +Y E+ CYQRLEFLGDAVL
Sbjct: 1639 SEACLKTLWNRFSLSQFEDIIGYRFKDRSLLVQALTHSTYFYNEVTDCYQRLEFLGDAVL 1698
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LIT +LY SPG LTD+RSA Y + L ++ ++ K +NI
Sbjct: 1699 DHLITRHLYEDKRMHSPGMLTDLRSA-----LYFMY-----LCPGLMMMIEKFVKTLNII 1748
Query: 714 VD--SFER----------LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
+ +F+R L E + PKALGDI ES++GAI++DSGC+ V+
Sbjct: 1749 KENANFDREVRVHLLNLYLLEGEEENAEEQVEVPKALGDIFESVAGAIYLDSGCSLHTVW 1808
Query: 762 ---------ESIRPLLEPMITP--ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAV 810
E + L P I+P + + L+P R + + GK V
Sbjct: 1809 CIYYNMLREEIEKCCLNPPISPIRDLLELEPDR----------VKFSRVERNAVEGKVKV 1858
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
V V G + A AK A+K L+ LK S
Sbjct: 1859 AVTVEGKG---RFVGAGRSYRIAKSTAAKRALRYLKGS 1893
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE--------- 378
++K ++ ++YG+++ D + LLN N L RQ + RE + ++
Sbjct: 929 SFKSYFWQKYGLEIYHDDQPLLNVDYTASRLNRLFPRRQAR-RESLEADYDTMSVVAQKQ 987
Query: 379 -LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK-NMLLDH 425
L PEL I P+ ST+ ++PSI++RL SLLLA L+ +LLD
Sbjct: 988 KLVPELVDI--HPIPASTWRCLQYLPSILYRLSSLLLANELRLQVLLDE 1034
>gi|411170363|gb|AFW16070.1| dicer-1 [Nilaparvata lugens]
Length = 2239
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 235/520 (45%), Gaps = 119/520 (22%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLK+A + L+ Y++ HEG LS + + +SN
Sbjct: 1718 SVLLQALTMSNANDGINLERLETIGDSFLKFAITTYLYCVYESVHEGKLSHLRSKQVSNL 1777
Query: 495 ALCKLGCDHKLPG----FIRTEPFD---PKMWMIPGD------NSG--SYELND------ 533
L +LG HK+ G + EP D P + +P + +G +++ N
Sbjct: 1778 NLYRLG-KHKIFGESMIATKFEPHDNWLPPCYFVPKELERALIEAGVPAFQWNQAELPSL 1836
Query: 534 --------HSLFNERKIYVTG----------------------RKKVKSKTVADVVEALI 563
+++ ER + G + + K++AD VEALI
Sbjct: 1837 RDMSTEEINAIVKERGEQLQGTMTDSPLSVENLPCFVPCNLITQHSIPDKSIADCVEALI 1896
Query: 564 GAFLSTGGENVGLIFLDRIGIKV-----------------------DFVNVPYERQFQVQ 600
GA+L G LIF+ +GIKV D NV F V+
Sbjct: 1897 GAYLIECGPRGALIFMSWLGIKVMPCEEVKVTDDTALERPVGSHLPDQNNVQIRYGF-VK 1955
Query: 601 AERLVNVRH-----------------LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ 643
R +RH LE L Y F D S L++A+TH SY + CYQ
Sbjct: 1956 PPRSPLLRHVSNPECELERLLAGFDVLERSLRYRFNDRSYLLQAMTHASYHTNRLTDCYQ 2015
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS 703
RLEFLGDA LDYLIT +LY PGDLTD+RSA VNN +A +V+HG HK+ H S
Sbjct: 2016 RLEFLGDAALDYLITRHLYEDKRQHCPGDLTDLRSALVNNTIFASLAVRHGFHKYFCHLS 2075
Query: 704 QELYKWINITVDSFERLSLESTFGWESE--------------TSFPKALGDIIESLSGAI 749
L + ++ F R+ E+ E PKALGD+ ES++GAI
Sbjct: 2076 PGLSE----VIERFVRIQEENGHAISEECYLIGEEECEEAEDVEVPKALGDVFESVAGAI 2131
Query: 750 FVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEY-CQKHHFSMKKTVAPRING 806
F+DSG + + V+ +++ I + + P REL E + F + +A
Sbjct: 2132 FLDSGMSLDAVWMVYYHMMKNEIDQFSTNVPKSPIRELLELEPETAKFGKPEKLAD--GR 2189
Query: 807 KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ V VEV GT + + AK A+K LK LK
Sbjct: 2190 RVRVNVEVFGKGT---YKGIGRNYRIAKCTAAKCALKQLK 2226
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS+L++ALT + +RLE +GD+ L + IT YLY Y ++ G L+ +RS
Sbjct: 1717 PSVLLQALTMSN---ANDGINLERLETIGDSFLKFAITTYLYCVYESVHEGKLSHLRSKQ 1773
Query: 681 VNNDCYALSSVKHGLHK 697
V+N L+ + G HK
Sbjct: 1774 VSN----LNLYRLGKHK 1786
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 43 KEMGICTLYLPNNCPIQTVIAQGNIKT---LKQTACLEACKKLHQIGALTDNLLPDVVVE 99
++M +CT+ LP N P++ I + T ++ A +EAC+ L++ L DNL P + E
Sbjct: 924 QDMYVCTIRLPINSPVKQDIVGHPMPTRVLARRIAAMEACRTLYEARELDDNLQP-IGKE 982
Query: 100 EHDAQKHGNEPYDAEHPIYFPPELVNQCPQ 129
N A P PP+L + P+
Sbjct: 983 RFQMLDSANAVEVAADPDEPPPQLWDIEPR 1012
>gi|341893002|gb|EGT48937.1| CBN-DCR-1 protein [Caenorhabditis brenneri]
Length = 1927
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 224/508 (44%), Gaps = 108/508 (21%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L A+TT +G LE ET+GDSFLK+A + L+ T Q+ HEG LS + + +SN L
Sbjct: 1412 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARSKEVSNCNL 1471
Query: 497 CKLG----------------------------CDHKLPGFIRTEPFDPKMWMI------- 521
+LG C+ K P E D +M +
Sbjct: 1472 YRLGKKLGIPQLIIANKFDAHDSWLPPCYIPTCNFKAPNTDDAEEKDIEMERLLNGETIE 1531
Query: 522 --PGDNSG-SYELNDHSL----------FNERKIYVT-----------GRKKVKSKTVAD 557
P + +G EL D + F +R V ++ + K++AD
Sbjct: 1532 EKPQNKTGWDMELKDEAKTTTEKIETITFPKRTALVNEDISPLPYNLLTQQNISDKSIAD 1591
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYE-RQFQVQAE 602
+EALIG L T G N L + +G+KV F++ P +Q +
Sbjct: 1592 AMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKDAVTDVAAPLLRFIDTPTNPNASTIQLD 1651
Query: 603 RL---VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 659
L LE + Y F++ + LV+A TH SY + CYQRLEFLGDAVLDY+IT
Sbjct: 1652 NLWQQFQFAKLEEKIGYRFKERAYLVQAFTHASYSNNRVTGCYQRLEFLGDAVLDYMITR 1711
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
+L+ SPG LTD+RSA VNN +A +VK+ KH + L+ I V
Sbjct: 1712 FLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKYEFQKHFIAMCPGLHHMIEKFVQLCAD 1771
Query: 720 LSLESTFGWE---------------SETSFPKALGDIIESLSGAIFVDSGCN----KEVV 760
+ ++ F E + PKALGD+ ES++GAI++DSG N +V+
Sbjct: 1772 RNFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRNLDTTWQVL 1831
Query: 761 FESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHAN 817
F +R +E P + P REL E K FS + + GK VTV+V
Sbjct: 1832 FHMMRSTIESCCANPPRS----PIRELMELESSKARFSKMERILE--TGKVRVTVDV--- 1882
Query: 818 GTLFKHTHADADKETAKKVASKEVLKSL 845
G + T + AK A+K L+ L
Sbjct: 1883 GNNMRFTGMGRNYRIAKATAAKRALRYL 1910
>gi|425626934|gb|AFX89025.1| DCR2 [Mayetiola destructor]
Length = 1646
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 189/409 (46%), Gaps = 75/409 (18%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L AITT + FH+E E LGD+FLK+ S L +Q+ HEG LS K +I+ N L
Sbjct: 1166 MLAAITTASAGDLFHMELFEVLGDAFLKFGVSLSLMHNHQDWHEGFLSAMKGKIVGNRNL 1225
Query: 497 CKLGCDHKLPGFIRTEPFD------PKMWMIPG--------------------------D 524
C KLPG I FD P M+ + +
Sbjct: 1226 CYNAIKMKLPGMINKNNFDPKDDWQPPMFKVDDVIKNKMRQKNISPNLLFELSLSKMEIE 1285
Query: 525 NSGSYELNDHSLFNERKIYVT-----------GRKKVKSKTVADVVEALIGAFLSTGGEN 573
+ E N L YV G +++ KT +D VEA++GA L + G +
Sbjct: 1286 SGKVSEQNVEMLEQTFNRYVNNDQEGSMQNVLGLQRIADKTSSDCVEAILGACLVSIGVD 1345
Query: 574 VGLIFLDRIGIKVDFVNVPYER----QFQVQAER-----------LVNVRHLESLLNYSF 618
L+ I NV + QF R L N LE+ + Y F
Sbjct: 1346 RTFKVLEMFNILPKRENVDITKLLSNQFHNPRVRTNIKDIEIDSFLPNHTELETNIGYKF 1405
Query: 619 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
+D + L++ALTH +Y + CYQ+LEFLGDAVLD+LIT Y+Y + P + PG LTD+RS
Sbjct: 1406 KDRAYLLQALTHPTYPTNRVTGCYQQLEFLGDAVLDFLITSYIYERCPEMDPGKLTDLRS 1465
Query: 679 ASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS---------------FERLSLE 723
A VNN A V++ +H +IL + L ++I+ VD E +E
Sbjct: 1466 ALVNNVTLACICVRYNIHLYILSQNAALTEFISQFVDYQIAHNHEVTDHVDLLMEEKDVE 1525
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
E PK LGD+IE+L GAIF+DSG N EV ++ I L++ I
Sbjct: 1526 CKMAEYVEV--PKTLGDVIEALIGAIFLDSGNNLEVTWKVIYGLMQKEI 1572
>gi|167046020|gb|ABZ10541.1| dicer-like protein B [Trichoplax adhaerens]
Length = 357
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 198/354 (55%), Gaps = 33/354 (9%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L+A+T + + F+LE+LE LGDS+LKYA S F +Y HEG LS K +I+SN L
Sbjct: 1 LKALTLARANDDFNLETLEFLGDSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60
Query: 498 KLGCDHKLPGFIRTEPFDPK-MWMIPG-------DNSGSYE-LNDHSLFNERKIYVTGRK 548
++G LPG+I D +W+ PG D+ G E L+ +L +++ T +
Sbjct: 61 QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPT--Q 118
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFL-DRIGIKVDFVN---VPYERQFQVQAERL 604
K+K+K +ADV+EAL+G L GEN F+ + +GIKV ++ + + + ++
Sbjct: 119 KLKNKCIADVMEALLGGILLELGENSANNFITNNLGIKVGRLSHNIAKLDDDARKEISKI 178
Query: 605 V---NVRHLESLLNYSFRDPSLLVEALTHGSY---MLPEIPRCYQRLEFLGDAVLDYLIT 658
N++ LE++L YSF+D LL+ ALTH +Y + E CYQRLEFLGDA+L Y++
Sbjct: 179 YNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAILQYIVV 238
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN---ITVD 715
+ Y+ P DL D AS+ N+ A+ ++ +G+HK+ + S L+ IN VD
Sbjct: 239 RHCYHANNNYKPADLHDFVEASLQNESLAVMTMVYGIHKYFFYNSPSLFSQINQLLQIVD 298
Query: 716 SFE----RLSLES-----TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
+ E RLS E + + PK LGD+ ESL GAIF+D G + EVV
Sbjct: 299 TNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESLIGAIFIDCGRSIEVV 352
>gi|340372191|ref|XP_003384628.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1530
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 218/893 (24%), Positives = 355/893 (39%), Gaps = 214/893 (23%)
Query: 47 ICTLYLPNNCPIQTVIAQ----GNIKTLKQTACLEACKKLHQIGALTDNLLPDV------ 96
IC+L+LP NCP+++ I + G + ++ A L A +KLH++ + D
Sbjct: 648 ICSLFLPINCPLRSDIIKSPPLGTKQQSQRAAALYAMEKLHKMDEVDDLFKAKASADSDD 707
Query: 97 --VVEEHDAQKHGNEPYDAEHPIYFP-PELVNQCPQDT--KITYHCYLIELKQNFN---- 147
V EE +K G L+ C + + Y Y +K+
Sbjct: 708 EDVKEEKKGEKTGAGSDKKSSSYKKEVSPLLTGCFESSVNATGYFAYAFVIKEETRGLLY 767
Query: 148 ----------------YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGK- 190
+ IPA+ L V+ E+EIK LTV LK + +
Sbjct: 768 SKTQGVAMLTKKQLPYWMIPAYS--LYVKDNSETEIK------------LTVTLKPVTQH 813
Query: 191 -IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDW 249
LT +++ + R F +F I+ D L D DY+++P + S+D
Sbjct: 814 IPSLTDEELNIYRSFHHNVFTDILFITPDNLEANF------DKAIKDYIIVPVTINSLDG 867
Query: 250 EPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQ-----IY 304
+ V + + H K+ + A + S P + NS + TP +
Sbjct: 868 KTVDDIK----LDFAHAKSIVSYYEAGEKRKPSKPYTPSSL-NSCLVTPAYRDSTIPGLQ 922
Query: 305 YITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKC 364
I V + L N + + ++ +Y ++ + L RR+ + L
Sbjct: 923 EIFWVEMDESKTPLSPFNYPKFANFVEFFKSKYDYEIIDKDQPALICRRVNTSFLKLFTS 982
Query: 365 RQEKQREPS--KISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 422
R EP+ K + PEL + P+S+S + +P+++ R++SLL+A L +
Sbjct: 983 RY-LMSEPAVKKTDITMFPELVHVF--PVSVSFWRVLRCLPAMLWRVESLLIAHKLSTRI 1039
Query: 423 ---------------------------------------LDHCMQNVT-IPTSK------ 436
L+ ++T +P+ +
Sbjct: 1040 RMETGIGRENSDTFLLTDTSVRGYADSGHGVLPSRRLQYLNDLTPDITKVPSDEEIRYSN 1099
Query: 437 -------VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDR 489
+L+A+T + + +LE LE LGDSFLK S L+ N HEG LS + R
Sbjct: 1100 RGPDNCLILQALTPRGANDSINLERLELLGDSFLKLVTSVYLYNLRPNSHEGKLSEARSR 1159
Query: 490 IISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV----- 544
++N L LG + I ++ F + G +S F ER +V
Sbjct: 1160 RVANINLFVLGKKKGITSAILSDDF------VSGIDS----------FKERLTWVPPGYA 1203
Query: 545 --TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD--------------- 587
KV K+VAD VEALIGA GG G+ + GIK++
Sbjct: 1204 ALEESHKVTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSN 1263
Query: 588 ----------------FVNVPY------ERQFQVQAERLVNVRHLESLLNYSFRDPSLLV 625
F + P ++ + L V ++ + YSF++ LL+
Sbjct: 1264 TRSLLLAESDSIFSSHFGSPPAPKLAFSDKAISTRNRILPQVSSIQGKIEYSFKNELLLI 1323
Query: 626 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
EA+TH SY +I CYQRLEFLGDA+LDYL+T ++Y + PG++T++RSA V N
Sbjct: 1324 EAMTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGEITELRSALVCNSR 1383
Query: 686 YALSSVKHGLHKHILHASQELYKWINITV---------DSFERLSLESTFGWES------ 730
+A ++ LHK + H S L+ + D FE +S+ ++
Sbjct: 1384 FAKLAISLNLHKSLCHGSPNLFNDMKKYAQSLRQREKEDMFEEMSINDNDSAQAIVESIK 1443
Query: 731 --------------ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
+ PK+L D E+L+GA+F+DSG N + V+E+ P LE
Sbjct: 1444 DGDFDDDDDDDDDDDIEPPKSLSDCFEALAGAVFIDSGMNLQTVWEAFSPFLE 1496
>gi|336386278|gb|EGO27424.1| hypothetical protein SERLADRAFT_446652 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1267
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 236/533 (44%), Gaps = 86/533 (16%)
Query: 336 RYGIQLCFDQEL-LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLS 394
R G+ DQE L+ + N+LS + + L PELC + P S
Sbjct: 629 RKGLDCLVDQEQPLIEVSKTPGLSNHLSPTFRPLTTSAKASAKYLIPELCAKLTIPAS-- 686
Query: 395 TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLES 454
T + +PSI R+ +L+ L +H I +L AI+T + E
Sbjct: 687 TLRTALLLPSISRRIDDILIVKELNAKFFNH-----HITEELLLAAISTPSAGFDYDYER 741
Query: 455 LETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPF 514
LE LGD+FLKY +S +F T +EG L V + +IISN AL K C LP FI++ PF
Sbjct: 742 LEVLGDAFLKYLSSIYVFVTNPAKNEGALHVSRQQIISNKALLKTACTVGLPPFIQSRPF 801
Query: 515 DPKMW-------------MIPGDNSGSYELNDHSLFNERK----IYVTGRKKVKS----- 552
K+W P D++ RK I KK++S
Sbjct: 802 SYKVWQPPNFSLVSIREDFTPNDDTKKISKAPSQSPLARKETEAIMEAPPKKIESEDSVK 861
Query: 553 -----------------------------KTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
K +ADVVEA+IGA +GG ++ L +
Sbjct: 862 GKALPGSHASSKKENRGQQDTQYTQWLGDKAIADVVEAIIGAAYISGGRDLALTTAKTLD 921
Query: 584 IKV-------DFVNVPYERQFQVQAE-RLVNVRHLESLLNYSFRDPSLLVEALTHGSYML 635
I + DF +V A+ R ++ +E+++ + F P LL +ALTH S
Sbjct: 922 IPIRNIEHWADFGRKALTPPPRVTAKLRDGSIEAVETIIGHKFAYPHLLAQALTHASVQG 981
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
+ CY+RLEF+GDA+L++++ +++N+ +SPG LT M+ A V+N A V GL
Sbjct: 982 YQ-STCYERLEFIGDAILEFMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSGL 1040
Query: 696 HKHILHASQELYKWINITVDSFERLSLE------------STFGWESETSFPKALGDIIE 743
H+HIL+ S L I +D ++ E F + E PKAL D++E
Sbjct: 1041 HEHILYESFPLAGNIQGYIDELKKKQTEEYELAAREQRTPGQFWLDVEP--PKALSDVVE 1098
Query: 744 SLSGAIFVDSG---CNKEVVFESI-RPLLEPMITPETMRLQPARELNEYCQKH 792
S+ GAI++ G E+VF +I +P IT +T+ P + + E + H
Sbjct: 1099 SIIGAIYISDGFQPIGSELVFNNILKPFYNKHITLKTLSHHPTKVILELLEAH 1151
>gi|312384317|gb|EFR29067.1| hypothetical protein AND_02261 [Anopheles darlingi]
Length = 1651
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 212/455 (46%), Gaps = 74/455 (16%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
NV++ + +L+A+T+K + F+LE E LGD+FLK++ S L + HEG L+ K
Sbjct: 1169 NVSLQQADILQALTSKHAHDVFNLERFELLGDAFLKFSVSAFLLMRHVTWHEGYLTTCKG 1228
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPK-MW--------------MIPGDNSGSY---- 529
R++SN L + LPG + FDP+ W MI +
Sbjct: 1229 RMVSNRNLLYCAMQYGLPGMQKVHRFDPRNEWLPPLATVPKVIREAMIKAKEMPALLFKL 1288
Query: 530 ELNDH----SLFNERKI-------------------YVTGRKKVKSKTVADVVEALIGAF 566
EL++ + + KI V +V KTVAD +EAL+G
Sbjct: 1289 ELSEEEVQSGIVQQSKIDAFLPMIKESEEESRSTLMAVLQHVQVSDKTVADSMEALLGVC 1348
Query: 567 LSTGGENVGLIFLDRIGI---KVDFVNVPYERQFQV---QAER------LVNVRHLESLL 614
+ G L GI D + ++ V Q ER L+N +E +
Sbjct: 1349 VKAVGYERSFRALSHFGIMPRDTDLAKLLRTHEYTVLNYQDERETIDRLLINPEKIERTV 1408
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
Y FR+ + L++A TH +Y + + Y++LEFLGDAVLD+LIT+Y++ + P +SPG LT
Sbjct: 1409 GYKFRNRTFLLQAFTHATYTTNTLTKSYEQLEFLGDAVLDFLITLYIFERNPHMSPGQLT 1468
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-----------DSFERLSLE 723
D+RSA VNN A V+ LH +IL S L I+ V D L+ E
Sbjct: 1469 DLRSALVNNVTLACVLVRFRLHHYILSQSPMLTDKIDKFVEVQGQKRNRIGDWVRLLTEE 1528
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR--LQP 781
S PK LGD+ E+L GAI++DSGC+ + LL+ I ++ +Q
Sbjct: 1529 SETPLAEYVDVPKVLGDVFEALIGAIYLDSGCDLVTTWRICYSLLQREIENFSLDTPIQV 1588
Query: 782 ARELNEYCQ-KHHFSMKKTVAPRINGKAAVTVEVH 815
R+L E+ + HFS APR+ V V +H
Sbjct: 1589 VRQLYEHQDARPHFS-----APRVED-VVVIVRLH 1617
>gi|393246311|gb|EJD53820.1| ribonuclease III [Auricularia delicata TFB-10046 SS5]
Length = 1227
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 242/512 (47%), Gaps = 75/512 (14%)
Query: 353 RIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSL 412
R+F A +S+ + +P K + PE+C + P S TF + VP + R++
Sbjct: 653 RLFPASRAISE-----EIDPPKF---IIPEVCARFVIPAS--TFETAYLVPCCLRRIEDT 702
Query: 413 LLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLF 472
LL LL+H + I +L AI++ + LE LGDS LK+ AS LF
Sbjct: 703 LLV-----KLLNHQFFDNEIEERLLLSAISSPSLCGDLDYQRLELLGDSVLKFLASAALF 757
Query: 473 KTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG---DNSGSY 529
E L + + I SN AL + LP FI T+PF K W+ P D + +
Sbjct: 758 VRKPTSSESELHLGRQNIFSNRALTQAARRAGLPPFILTKPFSIKSWIPPNYDFDRAPAK 817
Query: 530 ELND-----------HSLFNERKIYVTGRKKVK-----------SKTVADVVEALIGAFL 567
L++ + L ER+ + +VK KT+ADV EA++GA
Sbjct: 818 PLSEEDALIPEKVAAYKLAREREQKADAQARVKRQQDASEHWIGEKTIADVTEAILGAAF 877
Query: 568 STGGENVGLIFLDRIGIKV-DFV----NVPYERQFQVQAERLVNVRHLESLLNYSFRDPS 622
TGG+N+ L R+ +K+ D+V N+P Q++ E L H+E LL + P
Sbjct: 878 LTGGKNLVLRAAKRLAVKLQDYVDVKANIPGRSHVQLRCESL---EHVERLLGRPIQRPH 934
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L+ +ALTH S + + YQRLEFLGDA+LD L+ Y++ +Y L P LT +++A V+
Sbjct: 935 LVAQALTH-SVIDSSLATSYQRLEFLGDAILDLLVVRYIW-RYEKLDPEALTLLKAAMVS 992
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSF------ERLSLES----TFGWESET 732
N A V+ GLHKHI+HAS L I+ V + ER +S + E
Sbjct: 993 NSTLAAVCVQCGLHKHIIHASPSLGVKIDNYVKALHSARDKERALAQSEVRQPVQYWLEL 1052
Query: 733 SFPKALGDIIESLSGAIFVDSG---CNKEVVFESI-RPLLEPMITPETMRLQPAREL--- 785
PK L D+IESL GA+F+ E FE++ R + I + P L
Sbjct: 1053 EHPKPLSDLIESLLGALFISENYAIAPLEAFFENVLRLFYDEHIRLSSCSSHPTTTLFKM 1112
Query: 786 --NEYCQKHHFSMKKT----VAPRINGKAAVT 811
+ CQ+ F M+KT A I+GK ++T
Sbjct: 1113 LESRSCQR--FEMEKTTQKAAAYHIDGKLSLT 1142
>gi|328716579|ref|XP_001944314.2| PREDICTED: endoribonuclease Dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1609
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 227/486 (46%), Gaps = 79/486 (16%)
Query: 406 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKY 465
+H +Q+ + + + L DH + ++ +L+A+T +G +LE LET+GDSFLKY
Sbjct: 1100 VHGVQTGTFSFDFQPDLNDHPGPSPSV----LLQALTMSNANDGINLERLETIGDSFLKY 1155
Query: 466 AASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG------------------------- 500
A + L+ T+ N HEG LS + + +SN L +LG
Sbjct: 1156 AITAYLYCTHDNVHEGKLSHLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCY 1215
Query: 501 -CDHKLPGFIRTEPFDPKMWMI--------PGDNSGSYELNDHSL-FNERKIYVT----- 545
HKL + +W + P D + + F+ I T
Sbjct: 1216 FVPHKLEKALINASIPTTLWNMITLPTFKDPTDKEIEEVIQQFKVGFSNEDIENTPLFVP 1275
Query: 546 ----GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYERQF 597
+ + K++AD VEALIGA+L + G L+F+ +GI+V D + Y +
Sbjct: 1276 YNLVTQHSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPP 1335
Query: 598 QVQAERLVN------------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 645
R V+ E L Y F+D S L++A+TH SY + CYQRL
Sbjct: 1336 SSPLLRNVDDPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMTHASYYPNRLTDCYQRL 1395
Query: 646 EFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE 705
EFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +V++G HK+ H S
Sbjct: 1396 EFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVRNGFHKYFKHLSPG 1455
Query: 706 LY----KWINITVDSFERLSLESTFGWES------ETSFPKALGDIIESLSGAIFVDSGC 755
L +++ I ++ + E F E + PKALGD+ ES++GAI++DS
Sbjct: 1456 LSDVVCRFVTIQEENGHTIDEEFYFLGEDDCEEAEDVEVPKALGDVFESVAGAIYLDSNM 1515
Query: 756 NKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTV 812
+ + V++ ++E + + + P REL E + FS + +A + V V
Sbjct: 1516 SLDTVWKVYHKIMENEMEQFSKNVPKSPIRELLELEPETAKFSKPEKLAD--GRRVRVVV 1573
Query: 813 EVHANG 818
E+ G
Sbjct: 1574 EIFGKG 1579
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 171/444 (38%), Gaps = 84/444 (18%)
Query: 42 NKEMGICTLYLPNNCPIQTVIAQGNIKT---LKQTACLEACKKLHQIGALTDNLLPDVVV 98
N+ M +C++ LP N PI+ I + K+ A LE C++LH G L D L P +
Sbjct: 408 NQPMFVCSIRLPINSPIKHDIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQP-ITK 466
Query: 99 EEHDAQKHGNE----------PYDAEHP---------IYFP--PELVNQC-PQDTKITYH 136
E A + +E P+D E P Y+ E +N C P + K
Sbjct: 467 ESFHALFNADEVLPDAEDALIPWDTEEPRPGTNKRRQYYYKRIAEALNDCRPVENK---P 523
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPD 196
C+L + N N +P E + ++++ E G + +KH+ I P
Sbjct: 524 CHLYAILLNMNCPVPE---------EQNTRGRRIHPPEESVHGFGILTIKHIPSIPPFP- 573
Query: 197 KVLLCRRFQIALFRVIMD-----HNLDKLNEILKGLWL------RDNLEID-------YL 238
C ++L + D H LD + L + + ++ D Y
Sbjct: 574 IYTRCGEVYVSLKPIKTDMFLTQHQLDNIATFLNYTFTNVLRLQKCHVAFDPTTTHNCYY 633
Query: 239 LLPASEQS-----IDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNS 293
++P + IDW + ++ D L N M+ + + T N
Sbjct: 634 IVPTLRDASGSIDIDWNFLDNMHKCRDNKLSIITNEDRMNFQPDIDVLKDAVVTPWYRNQ 693
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN--- 350
Q +Y+ + HLN S F + T++ +Y +Y +++ ++ LL+
Sbjct: 694 -----EQPQYFYVAEICTHLNPKSPFPGSIENYKTFEDYYYLKYSLKIQNLEQPLLDVDH 748
Query: 351 --GRRIFHAQNYL----------SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYS 398
R F Y+ S + +R+ L PELC + + P S+ +
Sbjct: 749 TSARLNFLTPRYMNRKGVILPTSSDATKRAKRDNLSQKQILVPELCNVHLFPASM--WRK 806
Query: 399 FTFVPSIMHRLQSLLLAVNLKNML 422
+P I++R+ +LLLA ++ ++
Sbjct: 807 AVSLPCILYRINALLLADEIRTIV 830
>gi|238814324|ref|NP_001154925.1| endoribonuclease Dicer [Danio rerio]
gi|229485378|sp|Q6TV19.2|DICER_DANRE RecName: Full=Endoribonuclease Dicer
Length = 1865
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 180/341 (52%), Gaps = 50/341 (14%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPY 593
+ K++AD VEAL+G +L++ GE +FL +G+KV ++ +P
Sbjct: 1530 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 1589
Query: 594 ERQFQ-VQAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
F+ AER +N + ES +NY+F++ + L++A TH SY I CYQRLEF
Sbjct: 1590 RCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1649
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ S EL+
Sbjct: 1650 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1709
Query: 708 KWINITVDSFERLSLEST--FGWESE-------------TSFPKALGDIIESLSGAIFVD 752
+D F + LE G +SE PKA+GDI ESL+GAI++D
Sbjct: 1710 H----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMD 1765
Query: 753 SGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAA 809
SG + E V++ P++ P+I + + P REL E + + K + A R +GK
Sbjct: 1766 SGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVR 1822
Query: 810 VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1823 VTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1860
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1279 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1338
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1339 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1366
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1275 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1327
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1328 MRSKKVSN 1335
>gi|37266499|gb|AAQ90464.1| Dicer1 [Danio rerio]
Length = 1243
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 180/341 (52%), Gaps = 50/341 (14%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPY 593
+ K++AD VEAL+G +L++ GE +FL +G+KV ++ +P
Sbjct: 908 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 967
Query: 594 ERQFQ-VQAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
F+ AER +N + ES +NY+F++ + L++A TH SY I CYQRLEF
Sbjct: 968 RCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1027
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ S EL+
Sbjct: 1028 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1087
Query: 708 KWINITVDSFERLSLESTF--GWESE-------------TSFPKALGDIIESLSGAIFVD 752
+D F + LE G +SE PKA+GDI ESL+GAI++D
Sbjct: 1088 H----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMD 1143
Query: 753 SGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAA 809
SG + E V++ P++ P+I + + P REL E + + K + A R +GK
Sbjct: 1144 SGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVR 1200
Query: 810 VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1201 VTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1238
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 657 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 716
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 717 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 744
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 673 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 713
>gi|406034947|emb|CCF23094.1| Dicer 2 [Blattella germanica]
Length = 1649
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 227/489 (46%), Gaps = 84/489 (17%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
+V++A+T+ + F+LE LETLGDSFLK AS L+ Y EG L+ K ++I N
Sbjct: 1162 EVVQALTSASSNDIFNLERLETLGDSFLKLMASLYLYMHYLRLDEGKLTQVKGKLIGNRN 1221
Query: 496 LCKLGCDHKLPGFIRTEPFDPKM-WMIPG------------------------------D 524
L G + KL G+++ F P W+ PG
Sbjct: 1222 LYYCGINQKLGGYMKVHDFVPTSDWIAPGICVDREIQQLMRAMNVSPNFLYELVLPPNEQ 1281
Query: 525 NSGSYELNDHSLFNERKIYVTGRKK--------------VKSKTVADVVEALIGAFLSTG 570
SG N + ++ K V KT+AD VEALIGA+L
Sbjct: 1282 MSGVLSENTKEIIRQKLTDANVDKSGIHSSMENFLAVRAVADKTIADGVEALIGAYLKGS 1341
Query: 571 GENVGLIFLDRIGI--------------------KVDFVNVPYERQFQVQAERLVNVRHL 610
G L L + I K+ N P + + + +
Sbjct: 1342 GIRGALRLLTWLKILPSEALPGALLDTQPPTADVKMRDHNQPGDIYVLLSIHECMAI--- 1398
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E++L Y+F+D S L++ALTH SY + CYQRLEFLGDA+LD+LIT ++Y L+P
Sbjct: 1399 ENILQYTFKDRSYLLQALTHASYTPNRVTECYQRLEFLGDAILDFLITCHIYESCGELTP 1458
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY----KWINITVDSFERLSLESTF 726
G+LTD+RS+ VNN +A +V++G HK + + S L +++ D+ ++ E
Sbjct: 1459 GELTDLRSSLVNNVTFASLTVRYGFHKFMKYTSTRLMDMVDRFVKFQEDNGHSINEEVLI 1518
Query: 727 GW-ESETSF------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
E+ET+ PK LGD+ ES++GAI++DSG N + V+ L+ I + +
Sbjct: 1519 LLEETETNIAEAIDVPKVLGDLFESIAGAIYLDSGMNLKEVWRVYYRLMRKEIRTFSKEV 1578
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADAD-KETAKKV 836
QP R L E +K + N VTV++ +G ++ H + K AK+
Sbjct: 1579 PKQPVRLLYENAPHRPEFLKSRLIDNSN-VVMVTVKLLVDGKR-RYFHGFGNTKLQAKRA 1636
Query: 837 ASKEVLKSL 845
A+K LKSL
Sbjct: 1637 AAKCALKSL 1645
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 184/425 (43%), Gaps = 69/425 (16%)
Query: 47 ICTLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP--------- 94
IC L LP N P+ +I N K K++A LEACK+LHQ+G LTD+LLP
Sbjct: 616 IC-LQLPMNSPLTELIEGQEMDNRKLSKRSAALEACKRLHQMGELTDSLLPTGRESAVLD 674
Query: 95 ----------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITY-HCYLIE-- 141
D EE D G++ +PI FP L N P+ ++ H ++E
Sbjct: 675 SSDLFPLYVEDDETEELDTAPRGSKNRKQYYPIQFPDFLSNCRPKPNVDSFLHVIVMEPV 734
Query: 142 --LKQNFNYDIPAHDIVLAVRTELESEIKKV----NFDLEVDRGRLTVNLKHLGKI-QLT 194
+ N + ++++ +V + K + +F + ++ G L V+++ K +LT
Sbjct: 735 YSKPTDNNRKLVFYNLLDSVESFAILSSKPMPEICDFPIYMNVGELIVHVQQNDKFYRLT 794
Query: 195 PDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWL--RDNLEIDYLLLPASEQS-----I 247
++V F I +FR I+ +++K + ++NLE Y ++P S I
Sbjct: 795 EEEVASLEVFNIMIFRQIL--------KLMKPFMIIDKENLENSYFMVPTRIDSNGVHEI 846
Query: 248 DWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYIT 307
DW+ V S + +N + + G Y S Q Y +T
Sbjct: 847 DWDVVRSHG---TLPEVVEPTEEERNNLVISEELFGKTVVVPWYRST----QPDQNYIVT 899
Query: 308 GVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYL------ 361
+ L +S F ND +Y +Y+++Y +++ + LL + I + N L
Sbjct: 900 QITS-LTPSSPFPSND--YTSYADYYDKKYKLEIVKVDQPLLEVKAISNKINCLRPRGNK 956
Query: 362 -SKCRQEKQREPSKISFE--LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL 418
S +++R + FE L ELC P L + T +P+I+HR+ +LLA L
Sbjct: 957 VSHSTSKRKRHELQEDFEENLIGELCMRFQFPSVL--WLKATCLPTILHRINHILLAEEL 1014
Query: 419 KNMLL 423
+ ++
Sbjct: 1015 RQKIV 1019
>gi|170049284|ref|XP_001855187.1| endoribonuclease Dicer [Culex quinquefasciatus]
gi|167871117|gb|EDS34500.1| endoribonuclease Dicer [Culex quinquefasciatus]
Length = 1665
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 204/424 (48%), Gaps = 72/424 (16%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+++A+TTK + + LE E LGD+FLK++ S L K ++ HEG L+ K +++SN L
Sbjct: 1184 IIKALTTKSAHDVYDLERYELLGDAFLKFSVSLFLVKKHKEWHEGHLTAVKGQLVSNRNL 1243
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPGDN------------------------------ 525
LPG ++ FDPK W P +
Sbjct: 1244 LYCAMLINLPGMMKIHTFDPKNDWSPPLASVPHAVKQKMASINHSARVLYKLKMSEEEIQ 1303
Query: 526 SGSYELNDHSLF------NERKIYVT------GRKKVKSKTVADVVEALIGAFLSTGGEN 573
+G+ E + + F R + + ++ + K AD +EA++G +ST G
Sbjct: 1304 AGTIEKDKYEDFIAELDVQSRSLDTSPMQNYLSQQAMGDKMPADSMEAMLGVCVSTVGIK 1363
Query: 574 VGLIFLDRIGIKVDFVNVPYERQFQVQAERL-------------VNVRHLESLLNYSFRD 620
L +GI N+ ++ +RL ++ +E +L+Y+F+D
Sbjct: 1364 RSFRLLSFLGILPKKENLTTLLDDRIANQRLKADVTKNEVDSFLISPGRIERILDYTFKD 1423
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
+ L++ALTH SY I YQ+LEF+GDAVLD+LI+ Y+Y + PT+SPG LTD+RSA
Sbjct: 1424 RTYLLQALTHASYPTNRITGSYQQLEFVGDAVLDFLISAYIYEQNPTMSPGQLTDLRSAL 1483
Query: 681 VNNDCYALSSVKHGLHKHILHASQELYKWINITV-----------DSFERLSLESTFGWE 729
VNN A V+HGLH +IL S L ++ V D LS ES
Sbjct: 1484 VNNITLACILVRHGLHLYILSESASLTDTVSKFVAFQEAHKHEITDQVNLLSEESERCQG 1543
Query: 730 SETSF---PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR--LQPARE 784
+ F PKALGD+ ESL GA+F+DSG + EV + I L+ I ++ +Q R
Sbjct: 1544 AMAEFVDVPKALGDVFESLIGAVFLDSGNDLEVTWRVIYGLMHHEIATFSVETPIQIVRR 1603
Query: 785 LNEY 788
L E+
Sbjct: 1604 LYEW 1607
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 166/401 (41%), Gaps = 77/401 (19%)
Query: 66 NIKTLKQTACLEACKKLHQIGALTDNLLP-----------DVV------VEEHDAQKHGN 108
N+K K++A EAC+KL++ G L D+L+P +V EE A++ G
Sbjct: 627 NVKLAKRSAAFEACRKLYEAGELNDHLIPIDSKRQLANVSEVYFRHWKQFEEESAKQAGT 686
Query: 109 EPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIK 168
+ H I +P + CPQ K Y Y++ + FN D+ +I T SE
Sbjct: 687 QKNVRNHQIRYPSQTSGCCPQPGKPCY-IYVLRIAAGFNSDVQNENIE-TFHTLYSSE-- 742
Query: 169 KVNFDLE-------VDRGRLTVNLKHLGKIQLTPDKVLL-----------CRRFQIALFR 210
NF + + R + V+L L + L P + + ++FQ+ LFR
Sbjct: 743 -NNFGIMTTKPLPVLARMKFFVSLG-LINVHLDPTPIRVENAGSDADLAALKQFQLMLFR 800
Query: 211 VIMDHNLDKLNEILKGLWLRD--NLEIDYLLLP-ASEQSIDWEPVASLSFPCDIGLKHHK 267
++ + K + D N +L++P A + IDW+ V F L
Sbjct: 801 DVL--------RLWKEFLVLDSSNEANSFLVVPLAQSRQIDWQVVKDFPF-----LAQPS 847
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTP----HSGQIYYITGVLGHLNANSLFTRND 323
ST++ +R+V Y V P + Y +T V HL S F
Sbjct: 848 ELSTVARSRMV-------FDAKQYRHRVILPWYRTDRERAYVVTAVHEHLTPGSPFPNEK 900
Query: 324 GGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKI---SFE-- 378
TY+ ++ YG Q+C ++ L+ + I N LS ++ + ++ +F
Sbjct: 901 YQ--TYEDYFGTVYGQQICNKKQFLIEVKGITTWLNRLSPGDEDDGKSATRAKNWTFHEI 958
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK 419
L PELC P + T +PS +HR+ LLLA N++
Sbjct: 959 LIPELCHNFAFPADY--WLKATLLPSALHRINFLLLAENIR 997
>gi|443725259|gb|ELU12939.1| hypothetical protein CAPTEDRAFT_223153 [Capitella teleta]
Length = 1651
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 158/507 (31%), Positives = 231/507 (45%), Gaps = 103/507 (20%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+ +T + F+LE LET+GDSFLK+A + L+ Y HEG LS + + +SN L
Sbjct: 1134 ILQTLTMSNANDFFNLERLETIGDSFLKFAITVYLYCEYPGIHEGKLSYLRSKQVSNYNL 1193
Query: 497 CKLGCDHKLPG------FIRTEPFDPKMWMI----------------------PGDN-SG 527
KLG LP F TE + P ++I P N SG
Sbjct: 1194 YKLGKKKGLPDCMVAVKFEPTENWLPPGYVIRKEGAYKGLNVRIASIPAPLLAPAFNESG 1253
Query: 528 SY---------------ELNDHSLFNERKIY------------VTGRKKVKSKTVADVVE 560
S EL + + + K+ + + + K++AD VE
Sbjct: 1254 SKKEEQLPDGQMEKFTKELEECTKAEDEKLKGSDIPHMLIPYNLQTQHSLPDKSIADGVE 1313
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-PYERQF---------------------- 597
ALIG +L T G+ L F+ +G++V NV P ++
Sbjct: 1314 ALIGCYLVTCGQRAALQFMSWLGLRV-LPNVKPADKNNLAMSGFSCLPPPPSPLLTHVSN 1372
Query: 598 --QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 655
V L E + Y FRD S L++A TH SY + CYQRLEFLGDA+LDY
Sbjct: 1373 SEDVLKHLLDGYEEFEEKICYKFRDRSYLLQAFTHASYHYNTVTDCYQRLEFLGDAILDY 1432
Query: 656 LITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY----KWIN 711
+IT +L+ SPG LTD+RSA VNN+ +A +VK HK+ S +L+ K++
Sbjct: 1433 VITRHLFEDSEKHSPGVLTDLRSALVNNNIFAALAVKWNFHKYFRAISPQLFYVIDKFVT 1492
Query: 712 ITVDSFERLSLESTFGWESET--------SFPKALGDIIESLSGAIFVDSGCNKEVVFES 763
D + ++L+ FG E PKALGDI ES++GAI++DSG + + V++
Sbjct: 1493 WQKDRNDEINLDEEFGELEEDGEGTEEDIEIPKALGDIFESVAGAIYLDSGMSLDTVWQV 1552
Query: 764 IRPLLEPMITPETMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTL 820
+++P I T R+ P REL E + F + ++GK VTV V G
Sbjct: 1553 YYRMMKPQIDAFTERIPKSPVRELLEMEPETAKFEKPERT---MDGKIRVTVNVVGKGNF 1609
Query: 821 FKHTHADADKETAKKVASKEVLKSLKA 847
+ AK A+K LK +K+
Sbjct: 1610 ---RGIGRNYRIAKSAAAKRALKHIKS 1633
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 613 LLNYSFRDPSLLVEALTHGS----YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L+N+ P L+++ LT + + L +RLE +GD+ L + ITVYLY +YP +
Sbjct: 1123 LVNFIGPSPCLILQTLTMSNANDFFNL-------ERLETIGDSFLKFAITVYLYCEYPGI 1175
Query: 669 SPGDLTDMRSASVNN-DCYALSSVKHGL 695
G L+ +RS V+N + Y L K GL
Sbjct: 1176 HEGKLSYLRSKQVSNYNLYKLGK-KKGL 1202
>gi|167046022|gb|ABZ10542.1| dicer-like protein B [Placozoa sp. DMJ-2008]
Length = 357
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 196/354 (55%), Gaps = 33/354 (9%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L+A+T + + F+LE+LE LG S+LKYA S F +Y HEG LS K +I+SN L
Sbjct: 1 LKALTLARANDDFNLETLEFLGGSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60
Query: 498 KLGCDHKLPGFIRTEPFDPK-MWMIPG-------DNSGSYE-LNDHSLFNERKIYVTGRK 548
++G LPG+I D +W+ PG D+ G E L+ +L +++ T +
Sbjct: 61 QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPT--Q 118
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFL-DRIGIKVDFVN---VPYERQFQVQAERL 604
K+K+K +ADV+EAL+G L GEN F+ + +GIKV ++ + + + ++
Sbjct: 119 KLKNKCIADVMEALLGGILLELGENSANNFITNNLGIKVGRLSHNIAKLDDDARKEISKI 178
Query: 605 VN---VRHLESLLNYSFRDPSLLVEALTHGSY---MLPEIPRCYQRLEFLGDAVLDYLIT 658
N ++ LE++L YSF+D LL+ ALTH +Y + E CYQRLEFLGDA+L Y++
Sbjct: 179 YNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAILQYIVV 238
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN---ITVD 715
+ Y+ P DL D AS+ N+ A ++ +G+HK+ + S L+ IN VD
Sbjct: 239 RHCYHANNNYKPADLHDFVEASLQNESLAAMTMVYGIHKYFFYNSPSLFSQINQLLQIVD 298
Query: 716 SFE----RLSLES-----TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
+ E RLS E + + PK LGD+ ESL GAIF+D G + EVV
Sbjct: 299 TNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESLIGAIFIDCGRSIEVV 352
>gi|332029751|gb|EGI69620.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1257
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 192/427 (44%), Gaps = 85/427 (19%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
+++ A+TTK + F+LE LETLGDS+LK+ S L+ + +EG L+ K ++I N
Sbjct: 779 EIVHALTTKLGSDMFNLERLETLGDSYLKFIVSLFLYHKFPTFNEGQLTALKGKMIGNRN 838
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELN----------------------- 532
L G +PG I+ + F P IP S + L
Sbjct: 839 LYYCGNKKGIPGRIKNDAFVPMSNFIPPAYSVYHPLQKILMDELVAPNVLYEFLIPNMER 898
Query: 533 -----DHSLFNERKIYVT---------------GRKKVKSKTVADVVEALIGAFLSTGGE 572
N K V+ G + + KTVAD VEALIG +L
Sbjct: 899 FTGYISEDTLNMMKQTVSSWDKRDKQTGVEHYLGVQILSDKTVADSVEALIGVYLKNNHI 958
Query: 573 NVGLIFLDRIGI----KVDF----------VNVPYERQFQVQAERLVNVRHLESLLNYSF 618
L GI K+D + V + A+ L ES + Y F
Sbjct: 959 KGAAKLLKWFGILPDVKIDMLLGSISQNPVIGVGDPNYYMPWADTL------ESKIGYKF 1012
Query: 619 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
++ + L++A TH SY I CYQRLEFLGDA+LD+LIT Y+Y LSPGDLTD+RS
Sbjct: 1013 KNRAFLLQAFTHPSYTANGITECYQRLEFLGDAILDFLITCYIYENDVNLSPGDLTDLRS 1072
Query: 679 ASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE------- 731
A VNN +A SV+HGLH +L + +L++ +D F R E + E
Sbjct: 1073 ALVNNITFACLSVRHGLHTALLAYAPKLHE----IIDCFVRFQEERDYVVNDELLYVLIE 1128
Query: 732 ---------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--Q 780
PK LGD+ ESL GAI++DSG N V+E I + I + + Q
Sbjct: 1129 EDECNITEYVDVPKVLGDLFESLIGAIYLDSGKNLTKVWEIIYSFMHKEIDEFSRNIPKQ 1188
Query: 781 PARELNE 787
P R + E
Sbjct: 1189 PIRVIYE 1195
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 171/408 (41%), Gaps = 70/408 (17%)
Query: 32 YFKPTPKFDIN--KEMGICTLYLPNNCPIQTVIAQGNIKTL---KQTACLEACKKLHQIG 86
Y P K D + K M +L LPN P++ VI ++++ K++ ++ C +LH++G
Sbjct: 275 YLVPIWKLDKDDSKNMYRISLKLPNLSPLKDVIYGDFMRSIDGAKRSVAMKTCIQLHKLG 334
Query: 87 ALTDNLLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNF 146
ALT + +G P P+ V C +T + + N
Sbjct: 335 ALT-----------YPIAFYGAYP----QPLRSLYLHVFDCTSLYPVTGYDNRRVIFYNL 379
Query: 147 NYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLK-HLGKIQLTPDKVLLCRRFQ 205
D I+ R K +F + + G L V++K + I L+ + + L +RF
Sbjct: 380 LNDKSGFGILSTKRLP-----KIPSFPIFMKDGELNVDVKSNHATIVLSQNNIELLKRFN 434
Query: 206 IALFRVIMDHNLDKLNEILKGLWL--RDNLEIDYLLLPASE-QSIDWEPVASLSFPCDI- 261
LF I+ ++K + DNLE ++++P ++ Q I+WE V + I
Sbjct: 435 FLLFSEII--------PVIKSFMIFDNDNLENSFVIVPLNDKQEINWEIVETYQDLERIT 486
Query: 262 -GLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFT 320
+ H S A V YN+V Y +T V L S F
Sbjct: 487 PNIPFHFRTSDYELALVAPNYR--------YNAV---------YIVTRVCDDLTPESYFP 529
Query: 321 RNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCR------QEKQREPS- 373
D TY +Y+E++G+ + Q+ +L + I NY+ + + K+ + +
Sbjct: 530 NEDFD--TYTHYYKEKHGLIIENLQQSMLEVKPIPIKINYIKPRKLSEGPLKNKKTDDTV 587
Query: 374 -KISFELPPELCRIIMGPMSLSTFY-SFTFVPSIMHRLQSLLLAVNLK 419
+ L PELC I P S ++ T +PSI+HR+ +L+A +L+
Sbjct: 588 EDLQEHLVPELCYKINFP---SVYWLKATTLPSILHRICQILIAEDLR 632
>gi|440655799|gb|AGC22548.1| dicer [Ctenopharyngodon idella]
Length = 1881
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 177/341 (51%), Gaps = 50/341 (14%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPY 593
+ K++AD VEAL+G +L++ GE +FL +G+KV ++ +P
Sbjct: 1546 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 1605
Query: 594 ERQF-QVQAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
F AER +N + E +NY F++ + L++A TH SY I CYQRLEF
Sbjct: 1606 RCMFDHPDAERTLNHLISGFENFEKKINYMFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1665
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ S EL+
Sbjct: 1666 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1725
Query: 708 KWINITVDSFERLSLEST--FGWESE-------------TSFPKALGDIIESLSGAIFVD 752
+D F + LE G +SE PKA+GDI ESL+GAI++D
Sbjct: 1726 H----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMD 1781
Query: 753 SGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAA 809
SG + E V++ P++ P+I + + P REL E + + K + A R +GK
Sbjct: 1782 SGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVR 1838
Query: 810 VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1839 VTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1876
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|305354766|emb|CBL30926.1| Dicer protein [Echinococcus multilocularis]
Length = 1981
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 209/446 (46%), Gaps = 66/446 (14%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+++T + ++E LET+GDSFLK+A + LF Y HEG LS + +I+ N+ L
Sbjct: 1506 ILQSLTLLGAGDFINMERLETIGDSFLKFAVTMDLFLRYPEAHEGHLSSLRSQIVGNSNL 1565
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIPGDNSGSYELND-HSLFNERKIYVTGRKKVKSKT 554
+LGC+ LPG I F+P + W+ P + N+ S + + + + +K+
Sbjct: 1566 YRLGCEKNLPGRIVGMAFEPHENWLPPCYVCTTDSTNNIASTRIKNQCPSLTHQFLTNKS 1625
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDFVNVPYE--------RQFQV 599
VAD VE+L+G +L+ GE L L GI ++ P++ + +
Sbjct: 1626 VADCVESLVGCYLTERGERSALKLLQWFGIECLPPAGEMQPAGSPWKLAEEKPLSKVEEA 1685
Query: 600 QAERLVNV---RHLESLLNYSFRDPSLLVEALTHGSYM----------------LPEIPR 640
ER+ LE ++ Y+F++ LL+EA TH + + I
Sbjct: 1686 TVERVYRAGRFSKLEEIIGYTFKNRRLLIEAFTHSTCRDLHGPPSDDDGGFHGSVTSISG 1745
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPT--LSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
Y+RLEFLGDAVLDY +T +L+ T LSPG LTD+RSA VNN + +V+HGLH
Sbjct: 1746 GYERLEFLGDAVLDYAVTRFLFTTDATARLSPGALTDLRSALVNNVVFGALAVRHGLHAF 1805
Query: 699 ILHASQELYKWINITVD---SFERLSLESTFGWE---------------------SETSF 734
+ A+ L + + + + R L+ E E
Sbjct: 1806 LRAAAPPLTRTMALFLRHHHDVVRGDLDVLIAPEVNACRENKGATASQAEGDRANEEVEV 1865
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEYCQKH 792
PKALGD+ ESL+GA+F+DSG ++ PLL I + P R L E C +
Sbjct: 1866 PKALGDVFESLAGAVFLDSGLCLNTLWRVFFPLLRERIERYSTCVAKSPVRRLLELCPER 1925
Query: 793 HFSMKKTVAPRINGKAAVTVEVHANG 818
+ V P +GK V V V G
Sbjct: 1926 VKFERPMVRP--DGKMRVVVRVAGIG 1949
>gi|336373452|gb|EGO01790.1| hypothetical protein SERLA73DRAFT_85682 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1354
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 236/534 (44%), Gaps = 87/534 (16%)
Query: 336 RYGIQLCFDQEL-LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLS 394
R G+ DQE L+ + N+LS + + L PELC + P S
Sbjct: 723 RKGLDCLVDQEQPLIEVSKTPGLSNHLSPTFRPLTTSAKASAKYLIPELCAKLTIPAS-- 780
Query: 395 TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLES 454
T + +PSI R+ +L+ L +H I +L AI+T + E
Sbjct: 781 TLRTALLLPSISRRIDDILIVKELNAKFFNH-----HITEELLLAAISTPSAGFDYDYER 835
Query: 455 LETL-GDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE L GD+FLKY +S +F T +EG L V + +IISN AL K C LP FI++ P
Sbjct: 836 LEVLAGDAFLKYLSSIYVFVTNPAKNEGALHVSRQQIISNKALLKTACTVGLPPFIQSRP 895
Query: 514 FDPKMW-------------MIPGDNSGSYELNDHSLFNERK----IYVTGRKKVKS---- 552
F K+W P D++ RK I KK++S
Sbjct: 896 FSYKVWQPPNFSLVSIREDFTPNDDTKKISKAPSQSPLARKETEAIMEAPPKKIESEDSV 955
Query: 553 ------------------------------KTVADVVEALIGAFLSTGGENVGLIFLDRI 582
K +ADVVEA+IGA +GG ++ L +
Sbjct: 956 KGKALPGSHASSKKENRGQQDTQYTQWLGDKAIADVVEAIIGAAYISGGRDLALTTAKTL 1015
Query: 583 GIKV-------DFVNVPYERQFQVQAE-RLVNVRHLESLLNYSFRDPSLLVEALTHGSYM 634
I + DF +V A+ R ++ +E+++ + F P LL +ALTH S
Sbjct: 1016 DIPIRNIEHWADFGRKALTPPPRVTAKLRDGSIEAVETIIGHKFAYPHLLAQALTHASVQ 1075
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG 694
+ CY+RLEF+GDA+L++++ +++N+ +SPG LT M+ A V+N A V G
Sbjct: 1076 GYQ-STCYERLEFIGDAILEFMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSG 1134
Query: 695 LHKHILHASQELYKWINITVDSFERLSLE------------STFGWESETSFPKALGDII 742
LH+HIL+ S L I +D ++ E F + E PKAL D++
Sbjct: 1135 LHEHILYESFPLAGNIQGYIDELKKKQTEEYELAAREQRTPGQFWLDVEP--PKALSDVV 1192
Query: 743 ESLSGAIFVDSG---CNKEVVFESI-RPLLEPMITPETMRLQPARELNEYCQKH 792
ES+ GAI++ G E+VF +I +P IT +T+ P + + E + H
Sbjct: 1193 ESIIGAIYISDGFQPIGSELVFNNILKPFYNKHITLKTLSHHPTKVILELLEAH 1246
>gi|426198231|gb|EKV48157.1| hypothetical protein AGABI2DRAFT_202619 [Agaricus bisporus var.
bisporus H97]
Length = 1179
Score = 175 bits (444), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 178/662 (26%), Positives = 286/662 (43%), Gaps = 92/662 (13%)
Query: 171 NFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDH--------NLDKLNE 222
F L D LT+ + + L ++ L +F I R+IM+ NL +
Sbjct: 524 QFQLSHDGDALTLQSQRYLPLSLDAGRLDLIHKFTIRFCRMIMNKPFEALSYKNLGYMFA 583
Query: 223 ILKGLWLR-DNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTK 281
L+ W D+ E D + IDWE V+ +S + + ++Q +
Sbjct: 584 PLRKAWKPPDDEEYDL------SEDIDWEMVSVVSENWAVPFGDLTQLRKEAEDALIQDR 637
Query: 282 SGPLCTCMIYNSVVC-----TPHSGQIYYITGVLGHLNA--NSLFTRNDGGAITYKKHYE 334
+ ++C TP S ++G+L + N + GG ++ Y
Sbjct: 638 AVEFTN---RYEILCIREDMTPTSVVEGKVSGLLFRMWRPHNGRYFFRQGGKTLLEQCYS 694
Query: 335 ERYGIQ-LCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSL 393
R + L + +L R+ NYL+ + + P+K + L PE CR + +S
Sbjct: 695 RRKNFEGLAHPNQPILEVMRMPAPTNYLNPPISQLEL-PAKTTQFLIPECCRRLT--VSA 751
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
ST +PSI+ R+ LL L L+HC+++ ++ A ++ ++ E
Sbjct: 752 STLRMGYLLPSIIRRIDEFLLIKQLNAKNLNHCVKD-----DLLIMATSSPLAGNDYNYE 806
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGD+ LKY ++ +F N EG L + R ISN LC + LPG+I+ +P
Sbjct: 807 RLELLGDALLKYLSTTYVFVQNLNGTEGELHTARQRFISNRQLCDIVSGWGLPGYIQLKP 866
Query: 514 FDPKMWMIPG---------DNSGSYELNDHSLF------NERKIYVTGR----------- 547
F+ K W+ PG G ++D L NE +I + R
Sbjct: 867 FNIKSWLPPGMTIDDRQKESTVGGGVVDDGHLDMRPAQPNEDRIGASKRPKNKKRRLNKK 926
Query: 548 --KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL- 604
+ +KTVADV EA+IGA +GG + L + + F +V F +A
Sbjct: 927 TLSPIANKTVADVAEAIIGAAYISGGRDSALKATK--ALMIPFADVEEWADFGRKASAPR 984
Query: 605 --------VNVRH-LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 655
+V H +E++ + F+ PSLL LT S + + +QRLEFLGDAVLD+
Sbjct: 985 HDTGHAPEPSVMHFIETITGFRFQQPSLLRLTLTQNSMEMKD----HQRLEFLGDAVLDF 1040
Query: 656 LITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI-LHASQELYKWI---- 710
L+ YLY+K SPG+L+ M+S V+N A V GLH+ + + Q+ W
Sbjct: 1041 LVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGLHRFVHVRQQQKQVVWDYEKA 1100
Query: 711 -----NITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVD---SGCNKEVVFE 762
S + + T+ W + PK L D+IES+ GA ++ S EV+F+
Sbjct: 1101 LRGREAAETASTSKEAARVTYFW-MDLDVPKVLSDVIESIIGAAYISDDFSQAGVEVIFD 1159
Query: 763 SI 764
+
Sbjct: 1160 QM 1161
>gi|443925066|gb|ELU43989.1| type III restriction enzyme [Rhizoctonia solani AG-1 IA]
Length = 1442
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 219/448 (48%), Gaps = 37/448 (8%)
Query: 366 QEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH 425
++ +PS+I P + RI P+ T +P+++ ++ L + K +L
Sbjct: 918 EQPTAKPSQIV--TPSHMARI--SPIPADIVRIVTHLPNLLGQMTVLFRIDSAKEIL--- 970
Query: 426 CMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSV 485
+ +P +LEA+T Q GF + LET+GDS LK + LF YQ HHEG LS
Sbjct: 971 --RTNGVPLELLLEALTLPSVQAGFDYQRLETIGDSVLKVSMCTHLFIKYQGHHEGQLSA 1028
Query: 486 KKDRIISNAALCKLGCDHKLPGFIRTEPFDPK-MWMIPG--------DNSG----SYELN 532
KD ++SNA L ++G L F+ T + W P D+SG S E
Sbjct: 1029 MKDSVVSNANLMRVGRQSPLSRFLITGSMPTRRTWSPPASPTISETQDDSGEQDDSNEQK 1088
Query: 533 DHSLFNERKIYVTG----RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 588
D S NE+K + + +K++AD E+ +GA + G L + +G+ +
Sbjct: 1089 DDS--NEQKENDSKGEFEKTSFHTKSLADCTESTLGATYLSRGVEAALEVGEALGLPLGG 1146
Query: 589 VNVPYERQ----FQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
+ R+ F ++E + +E L Y F++ SL+ EA TH +Y L + P Y R
Sbjct: 1147 TTPWHLRREVDVFARKSEITMLFAPVEEKLGYKFKNASLVAEAFTHTAYDLSQGP-SYNR 1205
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQ 704
LEFLGD++ D + ++Y K+P ++PG ++ RS VN + +V LHKHIL +S
Sbjct: 1206 LEFLGDSLFDLYVVKFMYLKFPKMTPGQMSWARSRLVNASTFGKLAVGLELHKHILTSSA 1265
Query: 705 ELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI 764
L K + E +SLE + PKA+ D+ E++ GAI+VDS N E+ FE I
Sbjct: 1266 NLQKAVASFAQEVEEISLEEILQICWKIDAPKAISDVFEAIFGAIYVDSSFNLELTFEHI 1325
Query: 765 RPLLEPM---ITPETMRLQPARELNEYC 789
++ + +TP M+ P EL +
Sbjct: 1326 HRVMANIMEYVTP-VMQGDPTSELVRWV 1352
>gi|409080003|gb|EKM80364.1| hypothetical protein AGABI1DRAFT_128037 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1365
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 176/655 (26%), Positives = 279/655 (42%), Gaps = 98/655 (14%)
Query: 171 NFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDH--------NLDKLNE 222
F L D LT+ + + L ++ L +F I R+IM+ NL +
Sbjct: 730 QFQLSHDGDALTLQSQRYLPLSLDAGRLDLIHKFTIRFCRIIMNKPFEALSYKNLGYMFA 789
Query: 223 ILKGLWLR-DNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTK 281
L+ W D+ E D + IDWE V+ +S + + ++Q +
Sbjct: 790 PLRKAWKPPDDEEYDL------SEDIDWEMVSVVSENWAVPFGDLTQLRKEAEDALIQDR 843
Query: 282 SGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQ- 340
+ Y I + + S GG ++ Y R +
Sbjct: 844 AVEFTNR---------------YEILCIREDMTPTSE-VEGKGGKTLLEQCYSRRKNFEG 887
Query: 341 LCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFT 400
L + +L R+ NYL+ + + P+K + L PE CR + +S ST
Sbjct: 888 LAHPNQPILEVMRMPAPTNYLNPPISQLEL-PAKTTQYLIPECCRRLT--VSASTLRMGY 944
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSI+ R+ LL L L+HC+++ ++ A ++ ++ E LE LGD
Sbjct: 945 LLPSIIRRIDEFLLIKQLNAKNLNHCVKD-----DLLIMATSSPLAGNDYNYERLELLGD 999
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
+ LKY ++ +F N EG L + R ISN LC + LPG+I+ +PF+ K W+
Sbjct: 1000 ALLKYLSTTYVFVQNLNGTEGELHTARQRFISNRQLCDIVSGWGLPGYIQLKPFNIKSWL 1059
Query: 521 IPG---------DNSGSYELNDHSLF------NERKIYVTGR-------------KKVKS 552
PG G ++D L NE +I + R + +
Sbjct: 1060 PPGMIIDDRQKESTVGGGVMDDGHLNMRPAQPNEDRIGASKRPKNKKRRLNKKTSSPIAN 1119
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF--QVQAERL------ 604
KTVADV EA+IGA +GG + L + + F +V F + A RL
Sbjct: 1120 KTVADVAEAIIGAAYISGGRDSALKATK--ALMIPFTDVEEWADFGRKASAPRLDTGHAP 1177
Query: 605 -VNVRH-LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
+V H +E++ + F+ PSLL LT S + + +QRLEFLGDAVLD+L+ YLY
Sbjct: 1178 EPSVMHFIETITGFRFQQPSLLRLTLTQNSMEMKD----HQRLEFLGDAVLDFLVVRYLY 1233
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI-LHASQELYKWI---------NI 712
+K SPG+L+ M+S V+N A V GLH+ + + Q+ W
Sbjct: 1234 DKDEHASPGELSVMKSLMVSNSILAAICVWSGLHRFVHVRQQQKQVVWDYEKALRGREAA 1293
Query: 713 TVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVD---SGCNKEVVFESI 764
S + + T+ W + PK L D+IES+ GA ++ S EV+F+ +
Sbjct: 1294 ETSSTSKEAARVTYFW-MDLDVPKVLSDVIESIIGAAYISDDFSQAGVEVIFDKM 1347
>gi|340712553|ref|XP_003394821.1| PREDICTED: endoribonuclease Dicer-like [Bombus terrestris]
Length = 1488
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 196/433 (45%), Gaps = 74/433 (17%)
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
TK + F+LE LETLGDS+LK+ S L+ + H EG L+ K +II N L G
Sbjct: 1017 TKTGHDAFNLERLETLGDSYLKFITSLFLYNEFPKHSEGYLTALKGKIIGNRNLYYCGIK 1076
Query: 503 HKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFN------------------------ 538
+PG ++ + F P I + ++ D L+
Sbjct: 1077 KNIPGCMKVDSFIPLSNFIAPAYTVYRQVQDVLLYAKVSPNVLYEIEIPRDEQLCGNISE 1136
Query: 539 ------ERKI-------------YVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
+ KI + G + V KTVAD VEALIG +L + G LI L
Sbjct: 1137 ATKNAIQAKILDWEAAEAQTGMEHYLGIQTVSDKTVADCVEALIGVYLRSMGIKDTLILL 1196
Query: 580 DRIGI---KVDFVNVPYER-QFQVQAERLVN-----VRHLESLLNYSFRDPSLLVEALTH 630
I K+D + + Q + +E VN ++E+ L Y F + L++A TH
Sbjct: 1197 QWFQILPHKIDANELLFGTPQNPIISEGNVNHLMPWASNIETKLGYQFNNRGYLLQAFTH 1256
Query: 631 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSS 690
SY + CYQRLEFLGDA+LD+LIT Y+Y L+PG LTD+RSA VNN +A +
Sbjct: 1257 PSYTPNNMTECYQRLEFLGDAILDFLITNYIYESCGNLNPGALTDLRSALVNNITFACLT 1316
Query: 691 VKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE----------------TSF 734
V+HGLH +L + +L N ++ F + E + E
Sbjct: 1317 VRHGLHIALLSYAPKL----NNVIERFVKFQEERNYAVNDELLWILLEEDECNMAEHVDV 1372
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKH 792
PK LGDI ES+ GAI++DS N VV+ + ++ I + + QP R L E
Sbjct: 1373 PKVLGDIFESVIGAIYLDSNKNLSVVWNIVYSIMHKEIDEFSKNIPKQPIRVLYETHGAR 1432
Query: 793 HFSMKKTVAPRIN 805
+K TV N
Sbjct: 1433 PQFLKATVIENTN 1445
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 192/465 (41%), Gaps = 89/465 (19%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK----RYFKPTPKFD-INKEMGICTL------ 50
+D V ++IQS+GRAR S Y+++L+ +Y + ++ I + + +
Sbjct: 468 YDLPMDVRTYIQSKGRARHAYSRYVVLLQSDDSQYLRRHNEYKKIEQHLKQLLVDKTDER 527
Query: 51 YLPNNCPIQTVIAQGNIKTLK------QTACLEACKKLHQIGALTDNLLPD-------VV 97
LP IQ+ + Q +I+ + Q C+ + I +LL +
Sbjct: 528 NLPTENEIQSELYQHDIEPYQVISDDGQICCITEQMAISIINQYCTSLLKSKFACLSPIW 587
Query: 98 VEEHDAQKHGNEPYDAEHPIY-FPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIV 156
++ H P+Y FP L P KITY L L Y +P HD
Sbjct: 588 TLRKISENHV--------PMYQFPSALYGAFPLPRKITY---LHILHATPKYPVPHHDNR 636
Query: 157 LAVRTEL-----------ESEIKKV-NFDLEVDRGRLTVNLK-HLGKIQLTPDKVLLCRR 203
L ++ ++ +F + + G L +++K + K+ LT ++V+ +R
Sbjct: 637 YLTFYNLLHNSAGFGILSTKQMPQIPSFPIFMRVGELNIDVKVNHAKMILTEEEVIYLKR 696
Query: 204 FQIALFRVIMDHNLDKLNEILKGLWLRDNLEID--YLLLPASEQ-SIDWEPVASLSFPCD 260
F +F I+ ++K + DN D +L++P +E I+WE
Sbjct: 697 FHTLIFSDIVS--------VIKTFMVFDNCNRDNCFLIVPVNEDWDINWE---------- 738
Query: 261 IGLKHHKNCSTMSNARVVQTKSGPLC-TCMIYNSVVCTPH--SGQIYYITGVLGHLNANS 317
+ N+ + S P C Y + P+ + Y +T V + +S
Sbjct: 739 --------VTKQYNSIEYISPSVPFCFKSSDYELALVKPNYRAADTYIVTQVCDDITPSS 790
Query: 318 LFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISF 377
F + TY +Y+E++ +++ ++ +L + I A +Y+ ++K E K
Sbjct: 791 CFPTDHFS--TYIHYYKEKHRLEINNLEQPMLEVKSISRAIDYIMP--RDKSTESKK--E 844
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 422
L PELC I P + T +PSI+HR+ LL+A +L+ ++
Sbjct: 845 HLVPELCIRINFPALY--WLKATTLPSILHRVSQLLIAEDLRYVI 887
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALT---HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
V V H+ SL DP +V ALT H ++ L +RLE LGD+ L ++ +++L
Sbjct: 993 VPVLHILSLKCSYGPDPGQIVYALTKTGHDAFNL-------ERLETLGDSYLKFITSLFL 1045
Query: 662 YNKYPTLSPGDLTDMRSASVNN 683
YN++P S G LT ++ + N
Sbjct: 1046 YNEFPKHSEGYLTALKGKIIGN 1067
>gi|167234451|ref|NP_001107840.1| Dicer-2 [Tribolium castaneum]
gi|270002830|gb|EEZ99277.1| hypothetical protein TcasGA2_TC001108 [Tribolium castaneum]
Length = 1623
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 226/502 (45%), Gaps = 87/502 (17%)
Query: 422 LLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
+LD N + ++ +A+T + + +LE LETLGDSFLK+ AS + + ++EG
Sbjct: 1131 ILDVQFDNQSPNLCQIYQALTAAEANDIVNLERLETLGDSFLKFVASLYIIFKFPTYNEG 1190
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIP--------GDNSGSYELND 533
+ K +++SN L LG L G ++ P W+ P G+ E +
Sbjct: 1191 KSTTLKGKLVSNKNLYYLGVRKNLGGILKNSDLSPSDWVPPCFCIPQTISKAIGNKEYSV 1250
Query: 534 HSLFN-----------------------------ERKIY-----VTGRKKVKSKTVADVV 559
SLFN E Y ++ V K++AD V
Sbjct: 1251 VSLFNCCISPEEQVSGNLNRKTLSDMTTEEIAPDEENSYGNMCNFLNKQYVGDKSIADSV 1310
Query: 560 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQ-----VQAERLVN-------- 606
EAL+GA+ +GG G+ F++ IGI +P Q Q Q + ++N
Sbjct: 1311 EALLGAYFLSGGIQGGIKFMEWIGI------LPLSEQIQRLIETTQVDPVLNKKSTKTDV 1364
Query: 607 ------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
R +E L Y+F + + L++ALTH SY I Y+RLEFLGDAVLD+LIT Y
Sbjct: 1365 DFHMPQWREIEQRLGYTFTNRAFLLQALTHSSYSPNRITLSYERLEFLGDAVLDFLITCY 1424
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF--- 717
++ L PG +TD+RS+ VNN+ +A V+ G HK +L + L I+ D
Sbjct: 1425 IFEHCGHLEPGQVTDLRSSLVNNNTFASLVVRCGFHKFLLMMNSNLQGHIDKFADYLASK 1484
Query: 718 ------ERLSL--ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL- 768
E L L E PK LGDI E+L+GAI++DS + + V+ ++
Sbjct: 1485 NYVIDDEVLILLEEDEMNIAEYVDVPKVLGDIFEALAGAIYLDSNKDLKTVWRVFYKIIW 1544
Query: 769 -EPMITPETMRLQPARELNEYCQKHH---FSMKKTVAPRINGKAAVTVEVHANGTLFKHT 824
E + + + R L E C + FS V N K V+++ G +
Sbjct: 1545 REIDLFSKNVPKNVIRRLYE-CHTVYPPQFSKALEVG---NQKTMVSLDFMCEGRKKRVH 1600
Query: 825 HADADKETAKKVASKEVLKSLK 846
+K AK+ A+K L++LK
Sbjct: 1601 GFGTNKILAKRAAAKIALRALK 1622
>gi|302819687|ref|XP_002991513.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
gi|300140715|gb|EFJ07435.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
Length = 850
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 230/501 (45%), Gaps = 60/501 (11%)
Query: 31 RYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQ----TACLEACKKLHQIG 86
RY+ PKF K+ +CT+ P N P+++V +G ++ +Q ACL+AC+KL+ +G
Sbjct: 163 RYYNAKPKFSF-KDSFVCTVEFPPNAPLRSV--EGPLRRTEQLAKKAACLQACRKLYDMG 219
Query: 87 ALT-DNLLPDVV-VEEHDAQKHGNEP------YDAEHPIYFPPELV-NQCPQDTKITYHC 137
+ D L PDV +E D NE + P+ F V N+ + C
Sbjct: 220 EVRPDTLCPDVDDFDEEDQSMRKNESGKRKEIFSTAKPLIFEGSWVFNESEVQLQFYKIC 279
Query: 138 YLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDK 197
++IE ++ Y + V +++E+ L + + +G IQL ++
Sbjct: 280 FVIEPPESRTYS----NFGFLVNCVIDAEVTDSEVTLFSRNRVVNARVHRVGPIQLDANQ 335
Query: 198 VLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ--SIDWEPVA-- 253
V + +Q L + + LW N +LLLP + SIDW V
Sbjct: 336 VKAAKAYQELLLNGAFNRLARCSGSPQEILW---NKSQAFLLLPVHDDNDSIDWTSVHAT 392
Query: 254 -----------SLSFPCD---IGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPH 299
S S P D +G K H A ++ T +G + + + + VV T H
Sbjct: 393 AGVYRTLCSNFSPSSPIDGDGVGEKTH--------ADMLCTANGYVHSSALQDMVVATVH 444
Query: 300 SGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQN 359
+G+++ +TGVL + A SL + TY +Y+++Y L + LL + N
Sbjct: 445 NGRLFCVTGVLENFTAASLLPKR---GFTYIDYYKDKYQRTLRLPDQPLLKAKPTHAFHN 501
Query: 360 YLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK 419
L + +++ + ELPPELC + L S FVPS +H+ S + A+ L+
Sbjct: 502 LLIRPKEDHGSRQEESFVELPPELCLCLEIKSGL--IRSLYFVPSFLHQFTSTVCAIQLR 559
Query: 420 NMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHH 479
+ L IP +K+LEAIT+KKC E F ESLE LGDSFLKY +Q+LF Y H
Sbjct: 560 SPLWPW------IPAAKILEAITSKKCHEEFSYESLELLGDSFLKYVVTQKLFLVYDKKH 613
Query: 480 EGLLSVKKDRIISNAALCKLG 500
EG LS +++ + ++ G
Sbjct: 614 EGQLSARRNTYATKNSILPTG 634
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 42/242 (17%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY--------------- 686
Y+ LE LGD+ L Y++T L+ Y G L+ R+ +
Sbjct: 586 YESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTGLARACLPLIHQ 645
Query: 687 --ALSSVKHGLH----------KHILHASQE----LYKWINITVDSFERLSLESTFGWES 730
+L S++H L + I HASQ Y+ ++ +D R +++
Sbjct: 646 NASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVELDCEIRKFVQNVKEKPD 705
Query: 731 ETSF-----PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAREL 785
+ F PK LGD++ES++GAIFVD+ + E ++ + PLL P++TP T+R P R L
Sbjct: 706 ASCFDDLSSPKVLGDLLESITGAIFVDTNFDLEKLWRVVLPLLSPLVTPATLRFHPVRIL 765
Query: 786 NEYCQKHHFSMKKTVAPRINGKAAVT-VEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E C + MK + +A T V V T + +++AK A+ ++L S
Sbjct: 766 MELCARK--GMKVSF---FRTEATTTEVRVTFGEESLVETSQEKPRKSAKIDAALKMLAS 820
Query: 845 LK 846
L+
Sbjct: 821 LQ 822
>gi|356518185|ref|XP_003527762.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 455
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 162/304 (53%), Gaps = 18/304 (5%)
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-----NV 607
KT+AD VEALIGA+ GG L + +GI V+ + + ++
Sbjct: 126 KTIADCVEALIGAYYVDGGLFASLNVMKWLGIGVELELSSLDEAITAASLSTCVPIESDI 185
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
LE + Y F LL+EA+TH S I CY+RL+FLGD+VLD LIT +LY +
Sbjct: 186 ASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLDLLITWHLYQSHTD 245
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS----QELYKWINITVDSFERLSLE 723
+ PG L D+RSASVNND +A +V+H LH+H+LH+S ++ +++ + +S R SL
Sbjct: 246 IDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQILEYVKVISESDPR-SLP 304
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
S PKALGD++ES+ G I + + + + V+ PLL P++TP+ + L P R
Sbjct: 305 SIRA-------PKALGDVVESIVGPILIGTKLSLDQVWNVFYPLLSPIVTPDKLELPPFR 357
Query: 784 ELNEYCQK-HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
ELNE C HF K ++ V V V L +K+TAK A+ +L
Sbjct: 358 ELNELCDSLGHFVKVKENCEKMGSAMHVEVSVQLPNALLVREGKGPNKKTAKGEAAFHLL 417
Query: 843 KSLK 846
K L+
Sbjct: 418 KDLE 421
>gi|350855011|emb|CAZ36047.2| dicer-1, putative [Schistosoma mansoni]
Length = 2319
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 240/558 (43%), Gaps = 151/558 (27%)
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
PT+ +L+A+T + +LE +ET+GDSFLK+ + L+ TY HEG LS + RI+
Sbjct: 1748 PTT-ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVC 1806
Query: 493 NAALCK-----------LGCDHKL------PGF--------------------------- 508
N+ L + +GC + PG+
Sbjct: 1807 NSNLYRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIWST 1866
Query: 509 --------IRTEPFDPKMWMIPGDNS--GSYELND----HSLFNERKIYVTGRKKVKSKT 554
+R F + + P +N ++ ND H+ + +T ++ + K+
Sbjct: 1867 DTLMDDEVLRNIDFIDENKIKPIENFPISEWDPNDPKVLHAQHLNNQYLITIQQAIPDKS 1926
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGI--------------------KVDFVNVPYE 594
+AD VEALIG +L+T GE L + GI K ++++
Sbjct: 1927 IADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYLDTDEN 1986
Query: 595 RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY------------------MLP 636
R +A + LES LNY+F+DPSLL++A TH SY M
Sbjct: 1987 RANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNLMFS 2046
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
CYQRLEFLGDAVLDY+IT +LY SPG LTD+RSA VNN+ +A +V+ GLH
Sbjct: 2047 TDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLH 2106
Query: 697 KHILHASQELYKWINITV--------DSFERLSLES------------------------ 724
K+ +S +L I++ V D + ++ ES
Sbjct: 2107 KYFRASSPQLLHTIDVFVRYQKDVAKDDLDFITNESENQSSKPQHQTYEQHLSKSGKSNN 2166
Query: 725 -------------TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
T + PKAL DI ESL+GAIF+DS + + V++ P+++
Sbjct: 2167 ANNTIPTNTGHLTTNRLSDDVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKER 2226
Query: 772 ITPETMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADA 828
I T + P R+L E + F + + ++G+ +V V G +
Sbjct: 2227 IERYTACIPKSPVRQLLELEPEGTKFERARRM---VDGRISVCAHVLGKGRFYG---VGR 2280
Query: 829 DKETAKKVASKEVLKSLK 846
+ AK +A+K L+ L+
Sbjct: 2281 NYRLAKSLAAKRALRVLR 2298
>gi|302318908|ref|NP_001180543.1| dicer-2 [Bombyx mori]
gi|300669733|dbj|BAJ11655.1| DICER-2 [Bombyx mori]
Length = 1677
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 212/428 (49%), Gaps = 78/428 (18%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
VL A+TT + F LE ETLGDSFLK+AAS L + N +EG L+ K ++ISN L
Sbjct: 1191 VLAALTTINSNDTFDLERPETLGDSFLKFAASLYLHHKFPNMNEGQLTNIKGKLISNRNL 1250
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG----------------------------DNSG 527
G L G ++ E F P+ +++PG +
Sbjct: 1251 YYAGAKFNLGGRMKVEQFSPRSDFLVPGFFAPPKLEEFIEQRQIRPTFLIGIQFTEEEVM 1310
Query: 528 SYELNDHSLF--------------------NERKIYVTGRKKVKSKTVADVVEALIGAFL 567
+ EL++ S N + YV + V K++AD VEALIG +L
Sbjct: 1311 TGELSEESWESVMNNFQNGIAEAEPEGCAQNSMQCYVHSQA-VADKSIADSVEALIGTYL 1369
Query: 568 STGGENVGLIFLDRIGI---KVDF-------VNVPYERQFQVQAE---RLVNVR-HLESL 613
+GG + L+ + + + +F V P + +A+ L N R +E +
Sbjct: 1370 LSGGILAAVKLLEWMEVFPPQDNFADMLHKPVQTPLSKNLATEADIDFLLNNSRTDVEKI 1429
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
LNY+F+D + L+ AL+H SY+ + Y+RLEFLGDA++D+L+T +++ L PG++
Sbjct: 1430 LNYTFKDSTFLLNALSHSSYIRNRLTSSYERLEFLGDAIIDFLVTSHIFENCRELKPGEM 1489
Query: 674 TDMRSASVNNDCYALSSVKHGLHKHI---LHASQE--LYKWINITVD-----SFERLSLE 723
TD+RSA VNN +A +VK GLHK++ L+ S E + K++ ++ F+ L L
Sbjct: 1490 TDLRSALVNNVTFAAYTVKLGLHKYLCSELNPSLEKAIMKFVEHQIERNHEIEFDVLLLI 1549
Query: 724 STFGWESE--TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
S + PK L DI E+L GA+++DSG N E V+ + ++ I + R+
Sbjct: 1550 SEVDCQVAEYVDVPKVLSDIFEALVGAVYLDSGGNLETVWSVLYKIMHVEIDSFSKRIPK 1609
Query: 780 QPARELNE 787
QP + L E
Sbjct: 1610 QPVKILYE 1617
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 161/428 (37%), Gaps = 85/428 (19%)
Query: 48 CTLYLPNNCPIQTVIAQ---GNIKTLKQTACLEACKKLHQIGALTD-NLLP----DVVVE 99
T+ LP P++ I N KT K++A L+AC KLH++G L LLP +V E
Sbjct: 623 VTVILPIGSPVKEEIKGDPYSNTKTAKRSAALKACIKLHELGELHPLTLLPYKYAEVDYE 682
Query: 100 EHDAQ-------------------KHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLI 140
D + K G++ +H I FP L + P + H +
Sbjct: 683 RDDIRGCFPNWTKDCETEIKENVPKPGSKKRKRKHKIQFPSHL-DAVPDSSVFYLHVIKM 741
Query: 141 EL---KQNFNYDIPAHDIVLAVRTELESEI------KKVNFDLEVDRGRLTVNLK-HLGK 190
E K N N + +D + R E + K F G +T +++ +
Sbjct: 742 EAAFEKPNDNREKALYDFI--KRNECYGFLTQKPLPKLCEFPAFTSVGEITTSIEVNYAV 799
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQ---SI 247
I+LTP L ++F LF D++ I K + + + ++P E +I
Sbjct: 800 IKLTPIIFELVKQFHYFLF--------DQILAINKKFLIFEGTKNCMYVVPVLEHNGYNI 851
Query: 248 DWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQI---- 303
DW ++ H ++ V + KS + N +V + G I
Sbjct: 852 DWA-----------TMQTHHTVPPVAAPSVEERKSLVVTEENYTNCIVTPWYRGTILPER 900
Query: 304 YYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYL-- 361
Y +T VL ++ S F + + I L + + LL R I N L
Sbjct: 901 YVVTKVLEYMTPKSQFDADCYESYANYYANNYNLDI-LGSESQPLLEVRNISTRMNCLLP 959
Query: 362 ----SKCRQEKQREPSKISFE----------LPPELCRIIMGPMSLSTFYSFTFVPSIMH 407
K +KQ + I+F PE C P L +Y T +PSI+H
Sbjct: 960 RAATLKAFTDKQLKMISIAFGDDKPKGFAEIFIPEFCIKYDYPGVL--WYKATLLPSIIH 1017
Query: 408 RLQSLLLA 415
R+ LL+A
Sbjct: 1018 RVHMLLVA 1025
>gi|350399948|ref|XP_003485689.1| PREDICTED: endoribonuclease Dicer-like [Bombus impatiens]
Length = 1490
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 188/421 (44%), Gaps = 86/421 (20%)
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
TK + F+LE LETLGD++LK+ S L+ + H EG L+ K +II N L G
Sbjct: 1019 TKTGHDAFNLERLETLGDAYLKFITSLFLYNEFPKHSEGYLTALKGKIIGNRNLYYCGIK 1078
Query: 503 HKLPGFIRTEPFDPKMWMIPGDNSGSYELND---HSLFNERKIY---------------- 543
+PG ++ + F P I + ++ D H+ + +Y
Sbjct: 1079 KNIPGCMKVDSFIPLSNFIAPAYTVYRQVQDVLLHAKVSPNVLYEIEIPRDEQLSGHISE 1138
Query: 544 ------------------------VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
G + V KTVAD VEALIG +L + G LI L
Sbjct: 1139 ATKNAIQTKILDWETAEAQTGMEHYLGIQTVSDKTVADCVEALIGVYLRSMGIKDTLILL 1198
Query: 580 DRIGIKVDFVNVPY-----ERQFQVQAERLV---NVRHL-------ESLLNYSFRDPSLL 624
I +PY E F ++ N+ HL E+ L Y F + L
Sbjct: 1199 QWFQI------LPYKIDANELLFGTPQNPIISEGNINHLMPWASNIETKLGYRFNNRGYL 1252
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
++A TH SY + CYQRLEFLGDA+LD+LIT Y+Y L+PG LTD+RSA VNN
Sbjct: 1253 LQAFTHPSYTPNNMTECYQRLEFLGDAILDFLITNYIYESCGNLNPGALTDLRSALVNNI 1312
Query: 685 CYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE------------- 731
+A +V+HGLH +L + +L N ++ F + E + E
Sbjct: 1313 TFACLTVRHGLHIALLSYAPKL----NNIIERFVKFQEERNYAVNDELLWILLEEDECNM 1368
Query: 732 ---TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELN 786
PK LGDI ES+ GAI++DS N VV+ + ++ I + + QP R L
Sbjct: 1369 AEHVDVPKVLGDIFESVIGAIYMDSNKNLTVVWNIVYSIMHKEIDEFSKNIPKQPIRVLY 1428
Query: 787 E 787
E
Sbjct: 1429 E 1429
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 171 NFDLEVDRGRLTVNLK-HLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWL 229
+F + + G L +++K + K+ LT ++V+ +RF +F I+ ++K +
Sbjct: 663 SFPIFMRVGELNIDVKVNHAKMILTEEEVIYLKRFHTLIFSDIV--------PVIKTFMV 714
Query: 230 RDNLEID--YLLLPASEQ-SIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLC 286
DN D +L++P +E I+WE K + + +S + KS
Sbjct: 715 FDNCNRDNCFLIVPVNEDWDINWEVT-----------KQYSSIEYISPPIPFRFKSSD-- 761
Query: 287 TCMIYNSVVCTPH--SGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFD 344
Y + P+ + Y +T V + +S F + TY +Y+E++ + +
Sbjct: 762 ----YELALVKPNYRAADTYIVTQVCDDIMPSSCFPTDHFS--TYIHYYKEKHRLVINNL 815
Query: 345 QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPS 404
++ +L + I A +Y+ ++K E K L PELC I P + T +PS
Sbjct: 816 EQPMLEVKSISRAIDYIMP--RDKSTESKK--EHLVPELCIRINFPALY--WLKATTLPS 869
Query: 405 IMHRLQSLLLAVNLKNML 422
I+HR+ LL+A +L+ ++
Sbjct: 870 ILHRVSQLLIAEDLRYII 887
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 620 DPSLLVEALT---HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
DP + ALT H ++ L +RLE LGDA L ++ +++LYN++P S G LT +
Sbjct: 1010 DPGQIAYALTKTGHDAFNL-------ERLETLGDAYLKFITSLFLYNEFPKHSEGYLTAL 1062
Query: 677 RSASVNN 683
+ + N
Sbjct: 1063 KGKIIGN 1069
>gi|383856609|ref|XP_003703800.1| PREDICTED: endoribonuclease Dicer-like [Megachile rotundata]
Length = 1441
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 197/417 (47%), Gaps = 65/417 (15%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
+V+ A+T+K + F LE LETLGDS+LK+ S L+ + N++EG L+V K ++I N
Sbjct: 1016 QVMYALTSKMGLDAFDLERLETLGDSYLKFIVSLYLYTIFPNYNEGSLTVLKGKMIGNRN 1075
Query: 496 LCKLGCDHKLPGFIRTEPF-DPKMWMIPG----------------DNSGSYELN--DHSL 536
L G +PG ++ + F ++ P + YE+ H
Sbjct: 1076 LYYCGIKKNIPGRMKVDDFIASSNFIAPAYTVFRQLQKQLLEKKVSPNVLYEIQIPKHEQ 1135
Query: 537 FN-----------ERKI-------------YVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
FN + K+ + G + V KTVAD VEALIG +L G
Sbjct: 1136 FNGSISEETGIKIQEKVLNWETAESQTGMEHYLGIQTVPDKTVADCVEALIGVYLENLGI 1195
Query: 573 NVGLIFLDRIGI---KVDFVNVPYERQFQVQAERLVN-----VRHLESLLNYSFRDPSLL 624
+ L I + D + ++ + + +N +E+ L Y F + +LL
Sbjct: 1196 KNAITLLKWFQILPNETDAHRLLHDISENIVVDENINRFMPWASDIETKLGYRFENRALL 1255
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
++A TH SY + CYQRLEFLGDA+LD+LIT Y+Y L+PG LTD+RSA VNN
Sbjct: 1256 LQAFTHPSYTANNVTECYQRLEFLGDAILDFLITCYIYENCGNLTPGALTDLRSALVNNI 1315
Query: 685 CYALSSVKHGLHKHILHASQELYKWI-----------NITVDSFERLSLESTFGWESE-T 732
+A SV++GLH +L + L I +I D + LE +E
Sbjct: 1316 TFACLSVRYGLHTALLAYAPNLNDVIHRFVKFQEERDHIVNDELLWILLEEDECNMAEHV 1375
Query: 733 SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNE 787
PK LGD+ ES+ GAI++DSG N +E I + I + + QP R L E
Sbjct: 1376 DVPKVLGDLYESVIGAIYLDSGKNLRKTWEIIYSFMHKEIDEFSKNIPKQPVRVLYE 1432
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 222 EILKGLWLRDNLEID--YLLLPASE-QSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVV 278
+++K L DN D +L++P E + I+WE + K H + + +
Sbjct: 705 QVIKSFMLFDNSNRDNCFLVVPVDENEKINWEVI-----------KEHNSVERIPPSIPF 753
Query: 279 QTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYG 338
+ K+ ++ + +P +Y +T + L NS F ++ +Y +Y+E++G
Sbjct: 754 RFKNSDYELALVIPTYRPSP---DVYIVTQICEDLTPNSCFPTDN--FFSYAHYYKEKHG 808
Query: 339 IQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKIS-----FE--LPPELCRIIMGPM 391
+ + ++ +L + I NY+ R + + KI+ F+ L PELC I P
Sbjct: 809 LIINDLKQPMLEVKAISRKINYIKPRRMQNNSKKRKIADVYKDFKEHLVPELCIRITFPA 868
Query: 392 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 422
+ T +PSI+HR+ LL+A +L++ +
Sbjct: 869 LY--WLKTTLLPSILHRVSQLLIAEDLRSTI 897
>gi|380026731|ref|XP_003697097.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Apis
florea]
Length = 1362
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 197/424 (46%), Gaps = 78/424 (18%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
+V+ A+TTK + F+LE LETLGDS+LK+ S L+ + + EG L+ K +II N
Sbjct: 936 QVMYALTTKLGNDAFNLERLETLGDSYLKFIISLFLYNQFPKYAEGSLTTIKGKIIGNRN 995
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVT---------- 545
L G +PG ++ + F P I + +L D L E K+ T
Sbjct: 996 LYYCGIXKNIPGRMKVDSFVPLSNFIAPAYTVFRQLQDVLL--EAKVSPTVLYEIQISQQ 1053
Query: 546 -----------------------------------GRKKVKSKTVADVVEALIGAFLSTG 570
G + V K VAD VEALIG +L
Sbjct: 1054 EQFSGLMTETTKNLIQQKVLNWELAESQTGMEHYLGIQTVSDKAVADCVEALIGVYLRNM 1113
Query: 571 GENVGLIFLDRIGI---KVDFVNVPY-ERQFQVQAERLVN-----VRHLESLLNYSFRDP 621
G L L I ++D + + + + ++ +N +E+ L Y F++
Sbjct: 1114 GIKDTLTLLKWFQILPNEIDSNTLLFGTSENPIISKGDINSLMPWASEIETKLGYKFKNR 1173
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
L++A TH SY + CYQRLEFLGDA+LD+LIT Y+Y L+PG LTD+RSA V
Sbjct: 1174 GYLLQAFTHPSYSANHMTECYQRLEFLGDAILDFLITSYIYENCGNLNPGSLTDLRSALV 1233
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST------FGW----ESE 731
NN +A +V+HGLH +L S +L N ++ F + E W ESE
Sbjct: 1234 NNITFACLTVRHGLHIALLCYSPKL----NDIIERFVKFQEERNHIVNDELLWILLEESE 1289
Query: 732 TSF------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAR 783
+ PK LGDI ES+ GAI++DS N VV+E I ++ I + + QP R
Sbjct: 1290 CNIAEHVDVPKVLGDIFESIIGAIYLDSNKNLMVVWEIIYSIMHKEIDEFSKNIPKQPIR 1349
Query: 784 ELNE 787
L E
Sbjct: 1350 ILYE 1353
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 42/262 (16%)
Query: 171 NFDLEVDRGRLTVNLK-HLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWL 229
+F + ++ G L V++K + + L+ ++V + F +F I+ ++K +
Sbjct: 584 SFPIFMNIGELNVDVKVNHATMILSEEEVRFIKVFHTLIFSEII--------PVIKSFMV 635
Query: 230 RDNLEID--YLLLPASEQ-SIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLC 286
DN D +L+ P E+ +I+W+ + KH+K +S KS
Sbjct: 636 FDNFNFDNCFLITPVDEKWNINWQVI-----------KHYKCIEYISPIAPFDFKSTD-- 682
Query: 287 TCMIYNSVVCTPH--SGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFD 344
Y + P+ + + Y +T V + NS F ++ ++Y +Y+E++G+ +
Sbjct: 683 ----YELTLVKPNYRAAETYIVTQVCDDITPNSCFPTDN--FLSYAHYYKEKHGLTIKNL 736
Query: 345 QELLLNGRRIFHAQNY-LSKCRQEKQRE------PSKISFELPPELCRIIMGPMSLSTFY 397
++ +L + I NY L + Q + + P + L PELC I P +
Sbjct: 737 KQPMLEVKAISRTINYILPRHMQSESKNRRYVDLPKNMKEHLVPELCTKINFPALY--WL 794
Query: 398 SFTFVPSIMHRLQSLLLAVNLK 419
T +PSI+HR+ LL+A +L+
Sbjct: 795 KATILPSILHRISQLLVAEDLR 816
>gi|156553056|ref|XP_001605287.1| PREDICTED: endoribonuclease Dcr-1 [Nasonia vitripennis]
Length = 1917
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 221/518 (42%), Gaps = 142/518 (27%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + LF TY N HEG LS + + +SN
Sbjct: 1377 SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLFCTYNNIHEGKLSHLRSKQVSNL 1436
Query: 495 ALCKLGCDHKLPGFIRTEPFDP--------------------------KMWM---IPGDN 525
L +LG L + F+P MW IP +
Sbjct: 1437 NLYRLGRQKMLGESMIASKFEPHDNWLPPCYYVPKELEQALIESGVPSAMWNQADIPPFS 1496
Query: 526 SGSYELNDHSLFNERKIYV-------------------TG-------------RKKVKSK 553
S E+ND E K+ + TG + + K
Sbjct: 1497 RFS-EINDLVRETEHKLEIIKSELSQSEHGALNGLNGLTGDPLRSFIPYNLITQHSIPDK 1555
Query: 554 TVADVVEALIGAFLSTGGENVGLIFL----------------------DRIGIKVDFV-- 589
++AD VEALIGA+L G L+F+ DR+ +V
Sbjct: 1556 SIADCVEALIGAYLIACGPRGALLFMSWLGIHVLPTEEVVTISDSKPTDRLPGSTPYVEL 1615
Query: 590 --------------------------NVPYERQFQVQAERLVN-VRHLESLLNYSFRDPS 622
NVP Q +++ E +++ LE + Y+FR+ S
Sbjct: 1616 GEEGGSTKWTQLRYKKLQEPPSPLFYNVP---QPEIELEIMLDGYDSLERSIGYTFRNRS 1672
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VN
Sbjct: 1673 YLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVN 1732
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE----------- 731
N +A +V+ G HK+ H S L N +D F R+ E+ E
Sbjct: 1733 NTIFASLAVRCGFHKYFRHLSPGL----NTVIDRFVRIQEENGHSISEEYYLIGEREFEE 1788
Query: 732 ------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAR 783
PKALGD+ ESL+GAI++DS + + V+ +++ I + + P R
Sbjct: 1789 AEEAEDVEVPKALGDVFESLAGAIYLDSNMSLDAVWAVYFEIMKSEIEQFSANVPKSPIR 1848
Query: 784 ELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTL 820
EL E + F + +A + VTV+V G+
Sbjct: 1849 ELLELEPETAKFGKPEKLAD--GRRVRVTVDVFGKGSF 1884
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 193/475 (40%), Gaps = 107/475 (22%)
Query: 32 YFKPTPKFDIN------KEMGICTLYLPNNCPIQTVIAQ---GNIKTLKQTACLEACKKL 82
+ K TP++ IN K+M IC+L LP N P++ I+ N K+ A L+ C L
Sbjct: 629 FTKLTPEWKINNITVENKQMYICSLRLPINSPLKYSISSYPMPNKALAKRMAALQMCVCL 688
Query: 83 HQIGALTDNLLPDVVVEEHDAQKHGNEPYDAEHPIYFPPE---LVNQCPQDTK------- 132
H+ + D LLP V + + + H P D+E P E L P TK
Sbjct: 689 HKENEIDDYLLP---VGKENFKAH---PEDSEVPALPDDENMDLTEARPGTTKRRQYYYK 742
Query: 133 ------------ITYHCYLIELKQNFNYDIPAH--------------DIVLAVRTELESE 166
+ CYL + + +P DI + T +
Sbjct: 743 KIADALIDCKPELEEPCYLYHINMVLSCPLPEEQNTRGRKIYPPEESDIGFGILTR--KK 800
Query: 167 IKKV-NFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILK 225
I KV F + G + V+LK L+ + V+L +I +++ + + K
Sbjct: 801 IPKVCPFPIYTRSGEVRVDLK------LSKETVVL-DESKIDKVVSFLNYTFTNVLRLQK 853
Query: 226 GLWLRD-NL-EIDYLLLP------ASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARV 277
L L D N+ E Y+++P AS+ +DW+ V + + N +M N
Sbjct: 854 YLMLFDPNVSENSYIIVPVKKQPNASDICVDWDFVECI----------YANRDSMPNRIS 903
Query: 278 VQTKSGPLCTCMIYNSVVCTP-----HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKH 332
+ + + Y+ V P Q +Y+ + HLN S F D T++++
Sbjct: 904 EENRQNFVFEASKYHDAVIMPWYRNQDQPQYFYVAEICNHLNPKSSFPGADYS--TFEEY 961
Query: 333 YEERYGIQLCFDQELLLN-----GRRIFHAQNYLSK------CRQEKQREPSKISFE--- 378
Y ++YGIQ+ ++ LL+ R F Y+++ E+ + + + E
Sbjct: 962 YSKKYGIQIQNLEQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ 1021
Query: 379 -LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 432
L ELC I P SL + +P I++R+ +LLLA ++ H Q++++
Sbjct: 1022 ILIAELCAIHPFPASL--WRQAVCLPCILYRINALLLADQIRR----HVAQSISL 1070
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PSL+++ALT + +RLE +GD+ L Y IT YL+ Y + G L+ +RS
Sbjct: 1376 PSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLFCTYNNIHEGKLSHLRSKQ 1432
Query: 681 VNN 683
V+N
Sbjct: 1433 VSN 1435
>gi|432936630|ref|XP_004082201.1| PREDICTED: endoribonuclease Dicer-like [Oryzias latipes]
Length = 1890
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 174/350 (49%), Gaps = 59/350 (16%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV--------DFVNVPYERQFQVQ- 600
+ K++AD VEAL+G +L++ GE +FL +G+KV P R
Sbjct: 1546 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPSEPGTSRASKAPSSRTSAADL 1605
Query: 601 -----------------AER-----LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 638
AER + + E +NYSF++ + L++A TH SY I
Sbjct: 1606 SYGWLKIPPRCMLAHPDAERTLQHLISGFENFEKKINYSFQNKAYLLQAFTHASYHYNTI 1665
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+
Sbjct: 1666 TDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKY 1725
Query: 699 ILHASQELYKWINITVDSFERLSLEST--FGWESE-------------TSFPKALGDIIE 743
S EL+ +D F + LE G +SE PKA+GDI E
Sbjct: 1726 FKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFE 1781
Query: 744 SLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVA 801
SL+GAI++DSG + E V++ P++ P+I + + P REL E + + K + A
Sbjct: 1782 SLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPA 1838
Query: 802 PRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
R +GK VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1839 ERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1885
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1268 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1327
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG----DNSGSYELNDHSLFNERKIYVTGR 547
+LG LP + FDP + W+ PG + S + D + ++ ++ GR
Sbjct: 1328 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDKVDSEVGSKEELLTNGR 1383
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1284 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1324
>gi|348544424|ref|XP_003459681.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Oreochromis niloticus]
Length = 1917
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 178/355 (50%), Gaps = 68/355 (19%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYER------------QF 597
+ K++AD VEAL+G +L++ GE +FL +G+KV +P ER
Sbjct: 1572 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKV----LPLERGTLTGAVAQVHTHT 1627
Query: 598 QV-------------------QAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSY 633
QV AER +N + E +NY+F++ + L++A TH SY
Sbjct: 1628 QVADLCYGWLKIPPRCMLDHPDAERTLNHLISGFENFEKKINYTFKNKAYLLQAFTHASY 1687
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
I CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+
Sbjct: 1688 HYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKY 1747
Query: 694 GLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE-------------TSFPKAL 738
HK+ S EL+ +D F + LE G +SE PKA+
Sbjct: 1748 DYHKYFKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAM 1803
Query: 739 GDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSM 796
GDI ESL+GAI++DS + E V++ P++ P+I + + P REL E + +
Sbjct: 1804 GDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TA 1860
Query: 797 KKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
K + A R +GK VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1861 KFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1912
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1291 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1350
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG-----DNSGSYELN 532
+LG LP + FDP + W+ PG D S + LN
Sbjct: 1351 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDRLN 1392
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1307 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1347
>gi|307198394|gb|EFN79336.1| Endoribonuclease dcr-1 [Harpegnathos saltator]
Length = 1479
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 199/428 (46%), Gaps = 74/428 (17%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+++L+A+TTK C + F+LE LETLGDS+LK+ S L+ T+ EG L+ K RII N
Sbjct: 1052 TEILQALTTKMCHDMFNLERLETLGDSYLKFITSLFLYHTFPMLSEGQLTAIKGRIIGNR 1111
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP------------------------------- 522
L G + +PG ++ + F P +++P
Sbjct: 1112 NLYYNGVNKGIPGRLKIDEFAPMSTFIVPAYTVFRPLQKTLLDQDVSSNILYELPVPDEE 1171
Query: 523 ---GDNSGSYELNDHSLFNERKI--YVTGRKK------VKSKTVADVVEALIGAFLSTGG 571
GD S S + ++ + TG + + K ++D +EALIG +L G
Sbjct: 1172 RLTGDISASTSNTIQNTISQWSLAEIQTGMEHYLNIQIISDKAISDSIEALIGVYLRNTG 1231
Query: 572 ENVGLIFLDRIGI----KVD-FVNVPYERQFQVQA----ERLVNVRHLESLLNYSFRDPS 622
+ L GI K+D +N + E + +E L Y F + +
Sbjct: 1232 ISGAAKLLKWFGILPDIKIDELLNGTNSSNPIIGIGNPNEHMPWADSIEKRLGYKFNNRA 1291
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L++A TH SY + I CYQRLEFLGDAVLD+LIT ++Y LSPG LTD+RSA VN
Sbjct: 1292 YLLQAFTHPSYSVNRITDCYQRLEFLGDAVLDFLITCHIYEFCGNLSPGALTDLRSALVN 1351
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESET---------- 732
N +A +V++GLH +L + +L++ IN F + + + E
Sbjct: 1352 NITFACLAVRYGLHTCLLAYAPQLHEMIN----RFVKFQEDRNYAINDELLWVLLEEEDC 1407
Query: 733 ------SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARE 784
PK LGD+ E+L GAI++DS N V+E + + I + + P R
Sbjct: 1408 NIAEYIDVPKVLGDLFETLIGAIYLDSNRNLAKVWEMVYSFMHKEIDEFSRNVPKNPVRV 1467
Query: 785 LNEYCQKH 792
+ E+ H
Sbjct: 1468 IYEHQDAH 1475
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 230 RDNLEIDYLLLPAS-EQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTC 288
+DNLE +L++P + + I+W+ V + +++ + ++ + +
Sbjct: 749 KDNLENSFLIVPLNVDWEINWDDV-----------RKYQHVEKVPSSTLSHVRYSDYEVT 797
Query: 289 MIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELL 348
++ S +P +Y +T V L SLF +D TY +YEE++GI++ ++ L
Sbjct: 798 LVNPSYRTSP---SVYIVTQVCDDLTPTSLFPTDDFE--TYTHYYEEKHGIKIQNLKQPL 852
Query: 349 LNGRRIFHAQNYLS----KCRQEKQREPSKI-SFE--LPPELCRIIMGPMSLSTFYSFTF 401
L + I N + K K+R + FE L PELCR+I P +L + T
Sbjct: 853 LEVKAISTKINCIKPRSMKPGLSKRRRADVLEDFEEHLIPELCRMICFP-ALYWLKAST- 910
Query: 402 VPSIMHRLQSLLLAVNLKNMLL 423
+PSI+HR+ LL+A +L+ ++
Sbjct: 911 LPSILHRITHLLIAEDLRETIV 932
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 621 PSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
P+ +++ALT H + L +RLE LGD+ L ++ +++LY+ +P LS G LT +
Sbjct: 1051 PTEILQALTTKMCHDMFNL-------ERLETLGDSYLKFITSLFLYHTFPMLSEGQLTAI 1103
Query: 677 RSASVNNDCYALSSVKHGL 695
+ + N + V G+
Sbjct: 1104 KGRIIGNRNLYYNGVNKGI 1122
>gi|409050172|gb|EKM59649.1| hypothetical protein PHACADRAFT_114689 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1230
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 200/817 (24%), Positives = 337/817 (41%), Gaps = 104/817 (12%)
Query: 50 LYLPNNCPI-------QTVIAQGNIKTLKQTACLEACKKLHQIGALTDNL------LPDV 96
L LP+ PI +T QG L CL CK+L + G L D + DV
Sbjct: 373 LSLPDTLPIPEPLRRLETQSPQGATAQL----CLSTCKQLFKAGFLRDEFFFTPREVGDV 428
Query: 97 VVEEHDAQKHGNEPYDAEHPIYF--PPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHD 154
+V D + A Y P + Q+T + +I + ++ H
Sbjct: 429 IVAGTDGHEVKKANLSANTRCYLRKKPTFWTRSLQNTSARLYPLIISVGPIDSFRDGRHA 488
Query: 155 IVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMD 214
VL + ++ F + + + V L+H ++ K L R+ + + R + +
Sbjct: 489 PVLILTRLPLPHFEQ--FPVFSNGQKAFVQLQHGAPFEIDDQKQELLLRYTLRIARALTN 546
Query: 215 HNLDKLNE-------ILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHK 267
L+ E L G W + P + I W+ +A + L
Sbjct: 547 KPLECAMEDMLYYFAPLDGAWDSKPSDSAPWQFPKVDWQIPWQQIAEAAGYWAKKLVPED 606
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA- 326
T + C+I + V +Y+ + L+ S A
Sbjct: 607 GVLTEETVQ----------DCVIQDRAV---EFTNRHYVLKLRHDLSPRSKMKEGSAEAE 653
Query: 327 -ITY----KKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQ--REPSKISFEL 379
ITY K +E G++ + + L+ + N L+ ++ + P+++ L
Sbjct: 654 PITYLDYCKSRVKEFQGLK--DENQPLIEVSLVPPVANNLAPASKDTSTVKNPARL---L 708
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
PELC + P S+ + + +PSI H + +LL ++ + N +I + +
Sbjct: 709 VPELCYKFVIPASI--WRTVLLLPSITHMIDRMLLVKEMRVAVF-----NQSIGEGDLFQ 761
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
A+T E LE LGD+ LK S F T EG LS + +++SN L +
Sbjct: 762 AVTPVSANVEKDYERLELLGDALLKDILSTYFFATMPTKREGALSSARGQVVSNKMLHQN 821
Query: 500 GCDHKLPGFIRTEPFDPKMW---MIPGDNSGSYEL-NDHSLFNERK-IYVTGRKKVKSKT 554
+P +I+++P K+W ++ ++G NDH +K + + + KT
Sbjct: 822 AMAAGMPPWIQSKPLVVKLWTPYLVARQDAGDVGTSNDHRRGKRQKQLEEQDVQWLGDKT 881
Query: 555 VADVVEALIGAFLSTGGENVGL-------IFLDRIGIKVDFV-----NVPYERQFQVQAE 602
VADVVEA++GA GG + L + I DF N P + F +
Sbjct: 882 VADVVEAVVGAAFHQGGTDNVLRTMKILQFNMPEIAEHSDFWRVYAPNAPSHKTF---CD 938
Query: 603 RLVNVRH-LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
V +E++ + F P++L EALTHGS + Y RLEFLGD +LD I Y+
Sbjct: 939 LPVGTSEAVEAITGFKFHTPAILAEALTHGSISNQHM-TSYDRLEFLGDGILDSNIVWYI 997
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ YP LSPG L+ +++A V+N A +V+ GL++H+ + S+E+ + + V L
Sbjct: 998 FKAYPKLSPGGLSLLKAAMVSNLTLAAVAVESGLYEHVRYCSKEIMSAVKLYVQKIFTLR 1057
Query: 722 LESTFGWESETSF----------PKALGDIIESLSGAIFVDSGCNKEVV---FESI-RPL 767
+ E+E+ PK L D++E++ GAI+V + V F+ + RP
Sbjct: 1058 DQEYRDAEAESRLPNQFWLEVDAPKPLADLVEAIVGAIYVSDRFGTQGVKTFFQKVLRPF 1117
Query: 768 LEPMITPETMRLQPARELNEY-----CQKHHFSMKKT 799
+ I T+ P L E+ CQ+H +M+KT
Sbjct: 1118 YDRHIRLHTLAPHPGTSLFEFLQAEGCQQH--AMRKT 1152
>gi|395504573|ref|XP_003756622.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer [Sarcophilus
harrisii]
Length = 1924
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 183/374 (48%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFVNV--PYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV D+ N P + F Q
Sbjct: 1556 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWENTLYPSKDNFNSQ 1615
Query: 601 AERL------VNVRHLESLL---------------------------------------- 614
+ L ++V +L+S L
Sbjct: 1616 QKNLSVNFASISVANLQSSLYKDLEYGCLKIPPRCMFDYPDAEKTLNHLISGFENFEKKI 1675
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY+F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1676 NYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1735
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1736 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1791
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1792 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1851
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1852 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1905
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1906 AARRALRSLKANQP 1919
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1301 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1360
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1361 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1388
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1297 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1349
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1350 MRSKKVSN 1357
>gi|307169911|gb|EFN62420.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 506
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 196/427 (45%), Gaps = 88/427 (20%)
Query: 411 SLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQ 470
SL + V+ N+ H V +++ A+TTK + F LE LETLGDS+LK+ S
Sbjct: 9 SLDILVSTDNLFFSHGPNAV-----EIMHALTTKLGNDMFDLERLETLGDSYLKFITSLF 63
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP-------------- 516
L+ + +EG L+ K +II N L G +PG I+ + F P
Sbjct: 64 LYHKFPAFNEGQLTALKGKIIGNRNLYYCGNKKNIPGRIKNDAFIPTSNFIAPAYTVLRP 123
Query: 517 --KMWM-------------IPGDNSGSYELNDHSLFNERKIYVT--------------GR 547
K+ + IP + + +++ + ++I + G
Sbjct: 124 LQKILLDESVAPNVLYELRIPEEEKFTGYISEDTKMTMQQIVMNWDKEDTKTGYEHYLGV 183
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI----KVDFVNVPYERQFQVQAER 603
+ + KT+AD VEALIG +L + G L GI ++D E + +
Sbjct: 184 QILSDKTIADSVEALIGVYLKSNGIKGAAKLLKWFGILPNIQID------ELLYSNPPDP 237
Query: 604 LVN----------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
L+N +E+ + Y F + + L++A TH SY I CYQRLEFLGDA+L
Sbjct: 238 LINPGNPNSYMPWANDMETKIGYKFNNRAFLLQAFTHPSYTPNVITECYQRLEFLGDAIL 297
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LIT Y+Y LSPG LTD+RSA VNN +A +V++GL +L + +L++
Sbjct: 298 DFLITCYIYETCGNLSPGHLTDLRSALVNNITFACLAVRYGLDTALLSYAPKLHE----A 353
Query: 714 VDSFERLSLESTF----------------GWESETSFPKALGDIIESLSGAIFVDSGCNK 757
+D F + E + PK LGD+ ESL GAI++DSG N
Sbjct: 354 IDRFVKFQQERNYVVNDELLWVLLEEEECNLAEYVDVPKVLGDLFESLIGAIYLDSGKNL 413
Query: 758 EVVFESI 764
V+E +
Sbjct: 414 TKVWEIV 420
>gi|384494893|gb|EIE85384.1| hypothetical protein RO3G_10094 [Rhizopus delemar RA 99-880]
Length = 407
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 213/420 (50%), Gaps = 41/420 (9%)
Query: 373 SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 432
+K + L PE RI P+S S + + +P I+ ++ + LL LK + H +Q I
Sbjct: 7 TKSTVWLKPEEHRIF--PISASVYQASQLIPDILLQIDAFLLIQQLKTV---HNLQ--FI 59
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
+LEA T+ E LE LGD+ LK+ S L+ Y + E L+ + + S
Sbjct: 60 DDELMLEAFTSPSANRKQDYERLEFLGDAVLKFIVSSYLYAKYPTYSEAELTSLRQVMTS 119
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI-YVTGRKKVK 551
N + + D KL +I ++ + W P + ++ + KI + V
Sbjct: 120 NKSFANIAKDLKLHRYIISQSTVRRFWRPP---------HFQNVLDSNKIKHWLTHHLVS 170
Query: 552 SKTVADVVEALIGA-FLSTGGENVGLIF--------LDRIGIKVDFVNVPYERQFQVQAE 602
T+AD++E+ +GA FLS + G I+ L I + D ++ +
Sbjct: 171 DNTLADIIESTVGAAFLSQSID--GAIYAATQLKLPLGSIKVWSDLRHIWTPSPASATGQ 228
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
++V + +L Y F++ L+ EALTHGS M +P CY+RLEFLGDA+LD+ +T Y+Y
Sbjct: 229 INIDVVRVGEMLGYQFKNYLLVQEALTHGSVMDSLVP-CYERLEFLGDAILDFFVTQYIY 287
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
K+PT +PG L ++R +SVN+ + + GL KHI+H S E+ I + ++ + +
Sbjct: 288 QKHPTAAPGILHNLRKSSVNHHILSAVCLNMGLDKHIIHVSAEIAASI-LKAEAIHK-DM 345
Query: 723 ESTFGWESETSF-----PKALGDIIESLSGAIFVDSGCN---KEVVFES-IRPLLEPMIT 773
+S G +++ + PK L D+IESL GAI VDSG + E FE +P+LE I+
Sbjct: 346 QSK-GKDTDEYWLHLNPPKVLSDVIESLMGAILVDSGFDINQVEEFFERWFKPILEKHIS 404
>gi|389749088|gb|EIM90265.1| hypothetical protein STEHIDRAFT_93138 [Stereum hirsutum FP-91666 SS1]
Length = 1500
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 236/510 (46%), Gaps = 65/510 (12%)
Query: 323 DGGAITYKKHYEERYGIQ----LCFDQELLLNGRR-------IFHAQNYLSKCRQEKQRE 371
+ G TY + RY + + D E+L+ RR I+H S+ +
Sbjct: 863 EAGFTTYGQWLRARYKRKKFSVVLKDDEVLVEARRLKLQCSGIYHLH---SRPDDAVPMD 919
Query: 372 PSKISFEL-PPELCRIIMGPMSLSTFYSFTFVPSIMHRL------QSLLLAVNLKNMLLD 424
I + P CR +S S + +F +P ++HR+ QS LA+ L + D
Sbjct: 920 VDDIDTNIFPLSSCRWTA--ISTSLYRTFGLLPRLLHRINDVFRAQSAQLALGLPPINTD 977
Query: 425 HCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
++ TIP ++ G++ + ETLGDS LK S +F Y HEG LS
Sbjct: 978 LLIEAYTIPAART-----------GWNNQRFETLGDSVLKLCTSVHVFNKYPWRHEGQLS 1026
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPF-DPKMWMI-----PGDNSGSYELNDHSLFN 538
V + ISN L + L F+ TE + W P + + + D
Sbjct: 1027 VLRQVAISNMTLLRKAKAVSLESFLNTESTSNETTWRYCLPSGPAPHHPCHPVKDTDRVP 1086
Query: 539 ERKIYVTG----RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE 594
++ +++ D +EA +GA +TGG + L +G+ ++P+
Sbjct: 1087 LPPPSSRPRRLVHRRFPRRSLQDCMEATLGAAYATGGIPMALQAGTALGLNFGG-SIPWL 1145
Query: 595 RQFQVQ----AER---LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
+F Q AER L NV L+ L Y+FR+P LLVEA+TH S+ + YQRLEF
Sbjct: 1146 TRFGKQCESSAERPGVLFNV--LQERLGYTFRNPELLVEAMTHPSFATGG--QSYQRLEF 1201
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQEL 706
LGDAV+D + YLYNK+P+ + G L+ R+ +V+ + +VKH GLHK +L L
Sbjct: 1202 LGDAVIDLTVMSYLYNKFPSATSGKLSTARARAVSAPVLSSIAVKHLGLHKLMLVNETNL 1261
Query: 707 YKWINITVDSFERLSLESTF--GWESETSFPKALGDIIESLSGAIFVDSGCN---KEVVF 761
+ + + E S E W + PKA+ D++ESL GA+FVDSG N + V
Sbjct: 1262 SIAMGKYLPTLEETSYEDMVLNAWAHDP--PKAISDVLESLLGAVFVDSGWNWDLAQAVT 1319
Query: 762 ESIRPLLEPMITPETMRLQPARELNEYCQK 791
E + + +++P+T + P EL + K
Sbjct: 1320 EGVMNDVLELLSPDTPK-DPVSELMVWTAK 1348
>gi|258567596|ref|XP_002584542.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905988|gb|EEP80389.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1055
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 208/770 (27%), Positives = 323/770 (41%), Gaps = 101/770 (13%)
Query: 48 CTLYLPNNCPIQTVIAQGNIKTL--KQTACLEACKKLHQIGALTDNL-------LPDVVV 98
C + LP P++ + + K L KQ+A E C L + G L D+ LP +
Sbjct: 295 CEVVLPEKSPVRGLTGKPASKKLVAKQSAAFETCLLLRKHGLLDDHFVSTYHKRLPAMRN 354
Query: 99 EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLA 158
+ YD + P L T H L+ N H +V+
Sbjct: 355 ARLAISSKKSNQYD----MIVKPNLWQSSRGAIPTTLHAVAFNLRPNKALRREYHSLVIL 410
Query: 159 VRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
R +L E K LE D + IQ++ + + + F + +F+ + H +
Sbjct: 411 TREKL-PEFPKFPLYLEDDIQCDVICTPIECSIQVSDEDLEVLTTFTLRIFQDVF-HKIY 468
Query: 219 KLNEILKGLWLRD-NLEIDYLLLPASEQSI-DWEPVASLSFPCDIGLKHHKNCSTMSNAR 276
+ N + WL NL D S +SI DW + ++ DI ++ N++
Sbjct: 469 ERNIPMMTYWLAPLNLLSDLASANVSPRSILDWGILKAVFDEPDISW-------SIGNSK 521
Query: 277 VVQTKSGPLCTCMIYNSVVCTPHSGQIYYIT-GVLGHLN------ANSLFTRNDGGAITY 329
N V G+ Y T GV +L A R+ G + Y
Sbjct: 522 KFAK-----------NHFVYDRWDGRYRYFTLGVDPNLKPSDPPPATVARRRHMGNIMDY 570
Query: 330 ----KKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCR 385
K+ +++ ++ C + ++ I +N L K R EK+++ F + E
Sbjct: 571 CLSLFKNSRKKF-LETCDWNQPVIRAELIQLRRNLLDK-RTEKEKQNEGECF-ICLEALT 627
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKVLEAIT-- 442
+ P S++ +F F P+I+ RL+S L+A L+ C + +++IP LEA+T
Sbjct: 628 VSAIPASVAAL-AFAF-PAIISRLESYLIA-------LEACQKLDLSIPAELALEALTKD 678
Query: 443 TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
+ +E G + E LE LGD FLK A S LF ++ E VK+ +
Sbjct: 679 SDNTEEHRAMQVHFQRGMGKNYERLEFLGDCFLKMATSISLFTMNPDNDEYDFHVKRMCL 738
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ N L K + KL FIR++ F + W G L + K + +
Sbjct: 739 VCNQNLFKAALNLKLYEFIRSQSFSRRGWYPEG-------LTLLQGKGQSKTAPENKHAL 791
Query: 551 KSKTVADVVEALIGAFLSTGGEN--------VGLIFLDRIGIKV----DFVNVPYERQFQ 598
KT+ADV EALIGA +GG++ +F++ V D+ + ++Q
Sbjct: 792 ADKTIADVCEALIGASYLSGGKSHRFDMAVRAVTVFVNSSDHNVSDWQDYSKLYALPRYQ 851
Query: 599 VQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVL 653
V ++ L Y F+ P LL A TH SY +P CYQRLEFLGD++L
Sbjct: 852 TAVSDPAEIDLVAQIKEKLGYQFKYPKLLRSAFTHSSYPSAWAAVP-CYQRLEFLGDSLL 910
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D +LY++YP P LT+ + A V+N +VK GLH H+ H S + I
Sbjct: 911 DMACVEHLYHRYPDKDPQWLTEHKMAMVSNKFLGCVAVKLGLHPHLRHFSAPIQSQIATY 970
Query: 714 VDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
V+ E LE S W S + PK L D++E+ GAIF+DS EVV
Sbjct: 971 VEEIEAAELESGDSPDAWTSTSDPPKCLPDMVEAYIGAIFIDSDFRYEVV 1020
>gi|308237838|ref|NP_001184123.1| endoribonuclease Dicer [Sus scrofa]
gi|307715909|gb|ADN88174.1| dicer [Sus scrofa]
Length = 1915
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 175/371 (47%), Gaps = 80/371 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV P F Q
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPAVKRTDRAQAACPARESFTSQ 1609
Query: 601 AERLVNVR-------------------------------------------HLESLLNYS 617
+ L R + E +NYS
Sbjct: 1610 QKTLSGGRPAAGSRSSGLKDLEYGCLKIPPRCMFDHPDADRTLSHLISGFENFERKINYS 1669
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+R
Sbjct: 1670 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1729
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE---- 731
SA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1730 SALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELRRS 1785
Query: 732 ---------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--Q 780
PKA+GDI ESL+GAI++DSG + EVV++ P++ P+I + +
Sbjct: 1786 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRS 1845
Query: 781 PARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASK 839
P REL E + + K + A R +GK VTVEV G K AK A++
Sbjct: 1846 PVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAAR 1899
Query: 840 EVLKSLKASFP 850
L+SLKA+ P
Sbjct: 1900 RALRSLKANQP 1910
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1382
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1291 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1343
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1344 MRSKKVSN 1351
>gi|346716367|ref|NP_001231198.1| endoribonuclease Dicer [Cricetulus griseus]
gi|257051055|sp|A0MQH0.3|DICER_CRIGR RecName: Full=Endoribonuclease Dicer
gi|116831677|gb|ABK28790.1| DICER [Cricetulus griseus]
Length = 1917
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 178/373 (47%), Gaps = 82/373 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P + F Q
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQ 1609
Query: 601 ----------------------------------------AERLVN-----VRHLESLLN 615
AE+ +N + E +N
Sbjct: 1610 QKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKIN 1669
Query: 616 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1670 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1729
Query: 676 MRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE-- 731
+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1730 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELR 1785
Query: 732 -----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL- 779
PKA+GDI ESL+GAI++DSG + EVV++ P++ P+I + +
Sbjct: 1786 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVP 1845
Query: 780 -QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
P REL E + + K + A R +GK VTVEV G K AK A
Sbjct: 1846 RSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAA 1899
Query: 838 SKEVLKSLKASFP 850
++ L+SLKA+ P
Sbjct: 1900 ARRALRSLKANQP 1912
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I G ++ ++ L C+KLH+IG L ++L+P
Sbjct: 666 TLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 714
>gi|344248388|gb|EGW04492.1| Endoribonuclease Dicer [Cricetulus griseus]
Length = 1907
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 178/373 (47%), Gaps = 82/373 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P + F Q
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQ 1599
Query: 601 ----------------------------------------AERLVN-----VRHLESLLN 615
AE+ +N + E +N
Sbjct: 1600 QKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKIN 1659
Query: 616 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1660 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1719
Query: 676 MRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE-- 731
+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1720 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELR 1775
Query: 732 -----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL- 779
PKA+GDI ESL+GAI++DSG + EVV++ P++ P+I + +
Sbjct: 1776 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVP 1835
Query: 780 -QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
P REL E + + K + A R +GK VTVEV G K AK A
Sbjct: 1836 RSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAA 1889
Query: 838 SKEVLKSLKASFP 850
++ L+SLKA+ P
Sbjct: 1890 ARRALRSLKANQP 1902
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1374
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1283 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1335
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1336 MRSKKVSN 1343
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I G ++ ++ L C+KLH+IG L ++L+P
Sbjct: 656 TLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 704
>gi|345494561|ref|XP_001602524.2| PREDICTED: endoribonuclease Dicer [Nasonia vitripennis]
Length = 1450
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 201/423 (47%), Gaps = 76/423 (17%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+++TTK + F+LE +ETLGDSFLK+A S L++ Y EG L+ K +++ N L
Sbjct: 1023 ILQSLTTKVKNDVFNLERVETLGDSFLKFAISLFLYQAYPTCGEGPLTHLKGKLVGNLNL 1082
Query: 497 CKLGCDHKLPGFIRTEPFDPK-MWMIPG-------------------------------- 523
+ G + E F P ++ P
Sbjct: 1083 FYCSKQKNIAGRMHVEDFAPTGNFVTPAYAAHQVLQQILRAEKVSANILYEIRVPAAERF 1142
Query: 524 ----DNSGSYELNDHSLF--NERKIYVTGRKK------VKSKTVADVVEALIGAFLSTGG 571
N+ + + D L ++ K+ TG + V K+V+D EALIG +L G
Sbjct: 1143 SGCISNNTTDMMQDKVLAWPSDEKVTHTGMEHFLGIQVVSDKSVSDCTEALIGTYLLHLG 1202
Query: 572 ENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL----VNV-----RHLESLLNYSFRDPS 622
L L I +NV +V+ +L VNV + +E L Y FR+ +
Sbjct: 1203 IKGALQILKWFEILPKSLNVDQYLYSEVENPQLGDGDVNVHIPWAQTMEERLGYKFRNRA 1262
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L++A TH SYM YQRLEFLGDAVLD+L+T+++Y LSPG+LTD+RSA VN
Sbjct: 1263 FLLQAFTHPSYMPNRQTASYQRLEFLGDAVLDFLLTIHIYETCGNLSPGELTDLRSALVN 1322
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE------------- 729
N +A +V++GLH +L + +L+ I D F + + +
Sbjct: 1323 NITFACLAVRYGLHTALLALAPKLFDLI----DKFVKFQENRNYKIDDELLWVLLEEEEC 1378
Query: 730 ---SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARE 784
PK LGDI ES+ GAIF+DSG N EVV++ I L++ I + + QP R
Sbjct: 1379 NMAEHVDVPKVLGDIYESVIGAIFLDSGKNLEVVWQVIYNLMKNEIDLFSKNVPKQPIRV 1438
Query: 785 LNE 787
++E
Sbjct: 1439 IHE 1441
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 201/460 (43%), Gaps = 95/460 (20%)
Query: 10 SFIQSRGRARMQNSDYLLM-------LKRY--FKPTPKFDINKEMGICTLYL-PNNCPIQ 59
++IQS+GRAR S ++++ + RY F+ T +F G + P+N +
Sbjct: 479 AYIQSKGRARHSTSHFIILASSEDDYISRYRSFQQTERFLRQALHGKSDYRIKPSNNDVD 538
Query: 60 TVI------------AQGNIKTLKQTACL----EACKKLHQIGALTDNLLPDVVVEEHDA 103
++ A G I + + + + E C L + + L P V E+
Sbjct: 539 ALLYQYVIQPYIVKDANGTISVITEQSAISLINEYCANLVKSKFIM--LTPTWVKEDVSP 596
Query: 104 QKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNF-----NYDIPAHDIVLA 158
+ +P L + P+ + Y ++I++K N+ N + ++++
Sbjct: 597 SAYR-----------YPEALCSAFPKPNESLY-LHIIDMKPNYPRPNDNRHLVFYNLLSN 644
Query: 159 VRTELESEIKKV----NFDLEVDRGRLTVNLKHLGKIQ-LTPDKVLLCRRFQIALFRVIM 213
+T KK+ +F + ++ G L +N+K +++ LT ++ + F +F I+
Sbjct: 645 SQTYGILSAKKIPEIPSFPIFMNIGDLQINIKSNNQLKSLTEMEIEQLKLFHTLVFSKIL 704
Query: 214 DHNLDKLNEILKGLWLRD--NLEIDYLLLPASEQS-IDWEPVASLSFPCDIGLKHHKNCS 270
+++K + D N+E ++L++P +E+ I+W+ V +K +
Sbjct: 705 --------KVIKEFMIFDASNMENNFLVVPINERGQINWDIV-----------NRYKIIA 745
Query: 271 TMSNARVVQTKSGPLCTCMIYNSVVCTPH--SGQIYYITGVLGHLNANSLFTRNDGGAIT 328
++S + + K Y+ + TP+ + +Y +T V +L A S F +D +
Sbjct: 746 SISPSENLVVKESE------YDLALVTPNYRASNMYIVTQVCEYLKAESSFPTSDYN--S 797
Query: 329 YKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQ------EKQREPSKISFE--LP 380
Y +++ER+ I++ + +L + I N +K R +++R FE L
Sbjct: 798 YVHYFKERHYIEIKNPAQPMLEVKPISSKIN-CTKPRSIKANLSKRKRASLTEDFEEHLV 856
Query: 381 PELCRIIMGPMSLSTFY-SFTFVPSIMHRLQSLLLAVNLK 419
PELC I P S ++ T +PSI+HR+ L+ A L+
Sbjct: 857 PELCDRIDFP---SLYWLKATTLPSILHRISQLIAAEELR 893
>gi|47210543|emb|CAF93935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 479
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 176/349 (50%), Gaps = 58/349 (16%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 586
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 136 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEQGAAAGAAQSGRTAASDLC 195
Query: 587 -DFVNVPYERQF-QVQAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP 639
++ +P AE +N + E ++Y+F++ + L++A TH SY I
Sbjct: 196 YGWLKIPPRCMLDHPDAEHTLNHLISGFENFERKISYTFQNKAYLLQAFTHASYHYNTIT 255
Query: 640 RCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI 699
CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+
Sbjct: 256 DCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYF 315
Query: 700 LHASQELYKWINITVDSFERLSLESTF--GWESE-------------TSFPKALGDIIES 744
S EL+ +D F + LE G +SE PKA+GDI ES
Sbjct: 316 KAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFES 371
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAP 802
L+GAI++DSG + E V++ P++ P+I + + P REL E + + K + A
Sbjct: 372 LAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAE 428
Query: 803 RI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
R +GK VTVEV G K AK A++ L+SLKA+ P
Sbjct: 429 RTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 474
>gi|392593064|gb|EIW82390.1| ribonuclease III [Coniophora puteana RWD-64-598 SS2]
Length = 1217
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 235/499 (47%), Gaps = 61/499 (12%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PS+ R+ ++L+A L ML +H I +L A++ F E LE LGD
Sbjct: 692 LLPSVTQRIDNILIAKELNAMLFEH-----QITEGLLLSALSAPSALYAFDYERLELLGD 746
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
+FLKY S +F Y H EG L + ++ SN AL + +LP +I+ +P K+W+
Sbjct: 747 AFLKYITSIYVFVIYPAHAEGSLHNLRQKMTSNKALLQNALAIELPPYIQGKPLSLKLWL 806
Query: 521 IPGD--------------NSGSYELNDHSLFNER----KIYVTGRKKVK----------- 551
P + + + D ++ + R +KKV+
Sbjct: 807 -PTNYTLDKCPPIAHQRHDEHAASAVDTTVVDTRPHPDTTQARTKKKVRKQNQDQVTQWL 865
Query: 552 -SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN--VPYERQFQVQAERLV--- 605
KT+ADVVEA+IGA +GG +V L + + I ++ V + R+ R+
Sbjct: 866 GDKTIADVVEAIIGAAYLSGGCDVALRVMKALTIPLNSVEQWSDFGRKVLTPPPRVSAAL 925
Query: 606 ---NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
++ +E L+ + P LL +ALTHGS + YQRLEFLGDA+LD+++ ++Y
Sbjct: 926 PPRSLEFVEKLVRRKVKYPHLLAQALTHGSIQGYDA-TTYQRLEFLGDAILDFMVVRHIY 984
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL----HASQELYKWINITVDSFE 718
++ +LSPG +T ++SA V N A V GL++H+L S+ K+ +
Sbjct: 985 HRDESLSPGVMTILKSAMVANSALAAICVWSGLNEHLLVDDYEVSESFKKYARDLKAKEQ 1044
Query: 719 RLSLESTFGWESETSF------PKALGDIIESLSGAIFVDSG---CNKEVVF-ESIRPLL 768
+ S F PKAL D++ES+ GA+++ G + E+ F E + P
Sbjct: 1045 EVRTASLRDGTPIGQFWLHITPPKALSDVVESIIGALYISDGFEPLSIEIFFDEVLMPFY 1104
Query: 769 EPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADA 828
+ IT +T+ PA+ L + Q H + + +G+ +V +GTL +D
Sbjct: 1105 DQYITLKTITEHPAKILFDLLQAHGCQEYELDKGKGDGQFKF-CKVVVHGTLVAEATSDT 1163
Query: 829 DKETAKKVASKEVLKSLKA 847
+ A+++A E L +L+
Sbjct: 1164 -QSAARRLACMETLDALEG 1181
>gi|109478606|ref|XP_001068155.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|109479876|ref|XP_001069041.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|149025439|gb|EDL81806.1| rCG20888 [Rattus norvegicus]
Length = 1918
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 178/372 (47%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV D + P + Q
Sbjct: 1552 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQ 1611
Query: 601 ---------------------------------------AERLVN-----VRHLESLLNY 616
AE+ +N + E +NY
Sbjct: 1612 QKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINY 1671
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1672 IFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1731
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1732 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELRR 1787
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P++ P+I + +
Sbjct: 1788 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPR 1847
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1848 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1901
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1902 RRALRSLKANQP 1913
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKQGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN-DCYALSSVKHGLHKHIL 700
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N + Y L K GL ++
Sbjct: 1313 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGK-KQGLPSRMV 1370
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I G ++ ++ L C+KLH+IG L ++L+P
Sbjct: 666 TLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 714
>gi|327259080|ref|XP_003214366.1| PREDICTED: endoribonuclease Dicer-like isoform 2 [Anolis
carolinensis]
Length = 1915
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 177/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV D + F Q
Sbjct: 1547 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKIDWDSALYSHTEHFNSQ 1606
Query: 601 -----------------------------------------AERLVN-----VRHLESLL 614
AER +N + E +
Sbjct: 1607 QKHSSANCISVSLSNQESSRYKDLVYGCLKIPPRCMFDHPDAERTLNHLISGFENFEKKI 1666
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1667 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1726
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1727 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1782
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V+ P++ P+I + +
Sbjct: 1783 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANV 1842
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1843 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1896
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1897 AARRALRSLKANQP 1910
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1292 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1351
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1352 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1379
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1288 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1340
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1341 MRSKKVSN 1348
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I G + ++ L C+KLH+IG L D+L+P
Sbjct: 656 TLYLPINSPLRVSIVGPPMGCTRLAERVVALICCEKLHKIGELDDHLMP 704
>gi|327259078|ref|XP_003214365.1| PREDICTED: endoribonuclease Dicer-like isoform 1 [Anolis
carolinensis]
Length = 1918
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 177/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV D + F Q
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKIDWDSALYSHTEHFNSQ 1609
Query: 601 -----------------------------------------AERLVN-----VRHLESLL 614
AER +N + E +
Sbjct: 1610 QKHSSANCISVSLSNQESSRYKDLVYGCLKIPPRCMFDHPDAERTLNHLISGFENFEKKI 1669
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1670 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1729
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1730 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1785
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V+ P++ P+I + +
Sbjct: 1786 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANV 1845
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1846 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1899
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1900 AARRALRSLKANQP 1913
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1382
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1291 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1343
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1344 MRSKKVSN 1351
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I G + ++ L C+KLH+IG L D+L+P
Sbjct: 666 TLYLPINSPLRVSIVGPPMGCTRLAERVVALICCEKLHKIGELDDHLMP 714
>gi|126290301|ref|XP_001367933.1| PREDICTED: endoribonuclease Dicer-like [Monodelphis domestica]
Length = 1923
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 182/374 (48%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFVNV--PYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV D+ P + F Q
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWETTLYPSKDNFNSQ 1614
Query: 601 AERL------VNVRHLESLL---------------------------------------- 614
+ L ++V +L+S L
Sbjct: 1615 QKNLSVNYASISVANLQSSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1674
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY+F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1735 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1790
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1791 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1850
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1851 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1904
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1905 AARRALRSLKANQP 1918
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1300 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1359
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1360 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1387
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1296 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1348
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1349 MRSKKVSN 1356
>gi|426248555|ref|XP_004018028.1| PREDICTED: endoribonuclease Dicer [Ovis aries]
Length = 1922
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 176/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1613
Query: 601 AERLVN---------------------------------------VRHL-------ESLL 614
+ L +RHL E +
Sbjct: 1614 QKNLSGSRTAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKI 1673
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1674 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1733
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1734 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1789
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E V++ P++ P+I + +
Sbjct: 1790 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANV 1849
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1850 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1903
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1904 AARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|440907259|gb|ELR57423.1| Endoribonuclease Dicer [Bos grunniens mutus]
Length = 1922
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 176/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1613
Query: 601 AERLVN---------------------------------------VRHL-------ESLL 614
+ L +RHL E +
Sbjct: 1614 QKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKI 1673
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1674 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1733
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1734 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1789
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E V++ P++ P+I + +
Sbjct: 1790 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANV 1849
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1850 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1903
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1904 AARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|431839251|gb|ELK01178.1| Endoribonuclease Dicer [Pteropus alecto]
Length = 1921
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 175/374 (46%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVVKRTDRETATCPTRESFGSQ 1612
Query: 601 AERLVNVR----------------------------------------------HLESLL 614
+ L R + E +
Sbjct: 1613 QKSLSGGRAAACAASPRSPVFKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1672
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1788
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1849 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1902
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|410928196|ref|XP_003977487.1| PREDICTED: endoribonuclease Dicer-like [Takifugu rubripes]
Length = 1883
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 58/349 (16%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 586
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEEGVVTGPRRSHGTTAVDLC 1599
Query: 587 -DFVNVPYERQF-QVQAER-----LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP 639
++ +P AE + + E +NY+F++ + L++A TH SY I
Sbjct: 1600 YGWLKIPPRSMLDHPDAEHTLHHLISGFENFERKINYTFQNKAYLLQAFTHASYHYNTIT 1659
Query: 640 RCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI 699
CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+
Sbjct: 1660 DCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYF 1719
Query: 700 LHASQELYKWINITVDSFERLSLEST--FGWESE-------------TSFPKALGDIIES 744
S EL+ +D F + LE G +SE PKA+GDI ES
Sbjct: 1720 KAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFES 1775
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAP 802
L+GAI++DS + E V++ P++ P+I + + P REL E + + K + A
Sbjct: 1776 LAGAIYMDSRMSLETVWQIYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAE 1832
Query: 803 RI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
R +GK VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1833 RTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1878
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1263 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1322
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1323 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1350
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1279 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1319
>gi|125773725|ref|XP_001358121.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
gi|54637856|gb|EAL27258.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
Length = 2280
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 194/432 (44%), Gaps = 81/432 (18%)
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHK----LPGFIRTEPFDPKMWMIPGDNSGSYELND 533
HH L + + +S+ +C++ + LPG E P+ +P D S ND
Sbjct: 1858 HHWKLADLLDIKNLSSVQICEMVREKAEALGLPG--SAEQATPQATTVPLDESND-SCND 1914
Query: 534 HSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY 593
S F + + + K++AD VEALIGA+L G L+F+ +G++V +PY
Sbjct: 1915 FSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPY 1968
Query: 594 ERQ-------------------------------------FQVQAER-----LVNVRHLE 611
RQ + AER L E
Sbjct: 1969 SRQPAPASDSERTPGSTTPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHLLSGFEEFE 2028
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG
Sbjct: 2029 ASLGYRFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPG 2088
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW--- 728
LTD+RSA VNN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2089 ALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEE 2144
Query: 729 -----------ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PE 775
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I
Sbjct: 2145 YYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSN 2204
Query: 776 TMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
++ P REL E + F + +A + VTV+V GT + AK
Sbjct: 2205 SVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAK 2259
Query: 835 KVASKEVLKSLK 846
A+K L+ LK
Sbjct: 2260 CTAAKCALRQLK 2271
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1750 SVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1809
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1810 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1838
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1741 LVGHPGPSPSVILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1797
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1798 LSHLRSKQVAN 1808
>gi|393220706|gb|EJD06192.1| hypothetical protein FOMMEDRAFT_145449 [Fomitiporia mediterranea
MF3/22]
Length = 1473
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 232/489 (47%), Gaps = 37/489 (7%)
Query: 373 SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 432
S +F LP CR + M + +F S R+ + A +N L + I
Sbjct: 906 SMATFLLPESYCRRALFHMDI--VEAFQVFASACQRVCDVFRARVARNFL-----KYPPI 958
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
P + ++EA+T GF+ + LET+GDS LK + +F + N HEG L+ K+ +S
Sbjct: 959 PDNLIVEALTLPSAMAGFNNQRLETMGDSVLKLSVVVYIFNAFPNRHEGQLTALKENSVS 1018
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS 552
N L + L F+ +E + W + S L + +E +
Sbjct: 1019 NRLLLARAKEVHLERFLTSENRSMRTWRF--ERSSVTSLGTCKIGSEE--IALAHRTFPR 1074
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ--AERLVNVRHL 610
+++ D +EA +GA GG N L +G+ P+ ++ + L
Sbjct: 1075 RSLQDCMEASLGAAYVAGGLNFALQTGTALGLCFGG-PTPWPERYPLTEFVPPAALFGKL 1133
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ L Y+FR+ LLVEA+ H S+ E CYQRLEFLGDAV++ ++T YLYNK+P +
Sbjct: 1134 QEDLQYTFRNGKLLVEAVKHPSFDFLENYPCYQRLEFLGDAVIELVVTTYLYNKFPGANS 1193
Query: 671 GDLTDMRSASV-NNDCYALSSVKHGLHKHIL----HASQELYKWINI-TVDSFERLSLES 724
G ++ R+ ++ N AL+ + LHK++L S+++ K + I + S+E +SL
Sbjct: 1194 GQMSWARARAICNTTLAALAVNRLSLHKYLLANCVELSEDVAKEVEILSAASYEDVSLND 1253
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT---PETMRLQP 781
W + PK LGDI ES+ GA+FVDSG + + I L++ ++ P+ + P
Sbjct: 1254 ---WRYDP--PKVLGDIFESVIGAVFVDSGFDYTITAPIIEELMKDVLVLLHPD-IPYDP 1307
Query: 782 ARELNEY-----CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
L ++ C + F +T PR+N K V V +H + A+K AK +
Sbjct: 1308 VSRLLQWVAKSGCMRAKFQRTQT-NPRVNRKDGVVVLIHDR--IVAGPITAANKPLAKGL 1364
Query: 837 ASKEVLKSL 845
+++ ++ L
Sbjct: 1365 VAEKAMQVL 1373
>gi|71051733|gb|AAH98796.1| Dicer1 protein [Rattus norvegicus]
Length = 401
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 178/372 (47%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV D + P + Q
Sbjct: 35 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQ 94
Query: 601 ---------------------------------------AERLVN-----VRHLESLLNY 616
AE+ +N + E +NY
Sbjct: 95 QKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINY 154
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 155 IFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 214
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 215 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELRR 270
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P++ P+I + +
Sbjct: 271 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPR 330
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVE+ G K AK A+
Sbjct: 331 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVELVGKG---KFKGVGRSYRIAKSAAA 384
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 385 RRALRSLKANQP 396
>gi|307109321|gb|EFN57559.1| hypothetical protein CHLNCDRAFT_143199 [Chlorella variabilis]
Length = 2232
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 248/586 (42%), Gaps = 149/586 (25%)
Query: 327 ITYKKHYEERYGIQLCFDQELLLNGRRIFHAQ--NYLSKCRQEKQREPSKISFE----LP 380
++Y +Y ER+G + + + LL R+ Q L R K+ ++ E L
Sbjct: 1646 VSYAAYYAERWGQRELDEGQPLLAAARVSRQQLARGLDMRRARKRGCALQLEAEEEVRLL 1705
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV--L 438
P+LC I+ P+ + + +P++M +L+ LLA L +L +P K L
Sbjct: 1706 PQLC--IVHPVPAALWRPLGTLPALMWQLEGALLADQLLEQMLP-----ADLPPEKAPPL 1758
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISN----A 494
E + T + LETLGD+FLK+A S QLF ++ +HEG L+ +K+ +++N
Sbjct: 1759 ELLRTTR---------LETLGDAFLKFAVSAQLFSAHRQYHEGQLTKRKELVVANIHLAE 1809
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
A KLG D +L R PF W P S SK
Sbjct: 1810 AAVKLGLDRRL----RVLPFSMHNWASPEAVRKS-----------------------SKV 1842
Query: 555 VADVVEALIGAFLSTGGENVGLIFL-----------------------------DRIGIK 585
+AD +EAL+GAFL GG L FL +G+
Sbjct: 1843 LADAMEALLGAFLVAGGYPAALAFLQASAGRRGRRLRLPRAAAPGWGLCSQPYSQHLGLL 1902
Query: 586 VDFVNVPYERQFQVQAERL-VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
+V + E ++ L +V +E++L ++F L+VEALTH S+ + RC+QR
Sbjct: 1903 KGWVPISAEACIPPESPELECDVGAIEAVLGHTFASKWLVVEALTHCSWPGSGV-RCFQR 1961
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH-------- 696
LEFLGDAVLD L + DMRS +VN A + K GL
Sbjct: 1962 LEFLGDAVLDAL----------------MHDMRSVAVNASRLAYAG-KPGLDFVEEWRDR 2004
Query: 697 -KHILHA--------------------------SQELYKWINITVDS-----FERLSLES 724
+ L A S+E + ++V + F+ +
Sbjct: 2005 LREALEAQEQQACPASPAGGTAGAAAGDADAAASKEALRAAELSVMTQFAFGFQTIQAPK 2064
Query: 725 TFGWESETS-----FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
G + S L D++ESL GA+FVD+G + V+E + LL+PM+ PET+ +
Sbjct: 2065 ASGRDQPPSPALHCLQTVLSDVVESLIGAVFVDTGGDMGRVWEVTQRLLDPMVVPETLPV 2124
Query: 780 QPARELNEYCQKHHFSMKKTVAPRINGKAA-VTVEVHANGTLFKHT 824
P R L E Q+ + K A R G A V V+V A G + +
Sbjct: 2125 HPIRRLQELVQRCGVNPKYEEAGREQGGAGRVHVKVSAQGVVLGES 2170
>gi|195143531|ref|XP_002012751.1| GL23778 [Drosophila persimilis]
gi|194101694|gb|EDW23737.1| GL23778 [Drosophila persimilis]
Length = 2278
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 194/432 (44%), Gaps = 81/432 (18%)
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHK----LPGFIRTEPFDPKMWMIPGDNSGSYELND 533
HH L + + +S+ +C++ + LPG E P+ +P D S ND
Sbjct: 1856 HHWKLADLLDIKNLSSVQICEMVREKAEALGLPG--SAEQATPQATTVPLDESND-SCND 1912
Query: 534 HSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY 593
S F + + + K++AD VEALIGA+L G L+F+ +G++V +PY
Sbjct: 1913 FSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPY 1966
Query: 594 ERQ-------------------------------------FQVQAER-----LVNVRHLE 611
RQ + AER L E
Sbjct: 1967 SRQPAPASDSERTPGSTTPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHLLSGFEEFE 2026
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG
Sbjct: 2027 ASLGYRFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPG 2086
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW--- 728
LTD+RSA VNN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2087 ALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEE 2142
Query: 729 -----------ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PE 775
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I
Sbjct: 2143 YYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSN 2202
Query: 776 TMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
++ P REL E + F + +A + VTV+V GT + AK
Sbjct: 2203 SVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAK 2257
Query: 835 KVASKEVLKSLK 846
A+K L+ LK
Sbjct: 2258 CTAAKCALRQLK 2269
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1748 SVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1807
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1808 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1836
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1739 LVGHPGPSPSVILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1795
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1796 LSHLRSKQVAN 1806
>gi|345803797|ref|XP_868526.2| PREDICTED: endoribonuclease Dicer isoform 4 [Canis lupus familiaris]
Length = 1923
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 175/374 (46%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVMKRTDREKTMCPPRENFSSQ 1614
Query: 601 AERLVNVR----------------------------------------------HLESLL 614
+ L R + E +
Sbjct: 1615 QKNLSGGRAAASVASLRPSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1674
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1735 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1790
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1791 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1850
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1851 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1904
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1905 AARRALRSLKANQP 1918
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|296475171|tpg|DAA17286.1| TPA: endoribonuclease Dicer [Bos taurus]
Length = 1922
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 172/373 (46%), Gaps = 81/373 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1614
Query: 601 AERLVN---------------------------------------VRHL-------ESLL 614
+ L +RHL E +
Sbjct: 1615 QKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEKKI 1674
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1735 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1790
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E V++ P++ P+I + +
Sbjct: 1791 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANV 1850
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
P REL E + + +GK VTVEV G K AK A
Sbjct: 1851 PRSPVRELLE--MEPEITKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAA 1905
Query: 838 SKEVLKSLKASFP 850
++ L+SLKA+ P
Sbjct: 1906 ARRALRSLKANQP 1918
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQ-QLFKTYQNHHEGLLSVKKDRIISNAA 495
+L+A+T +GF+LE LE LGDSFLK+A + L + HEG LS + + +SN
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNCN 1356
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIP 522
L +LG LP + FDP + +P
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDPPVNGLP 1383
>gi|42733596|ref|NP_976235.1| endoribonuclease Dicer [Bos taurus]
gi|257051053|sp|Q6TUI4.3|DICER_BOVIN RecName: Full=Endoribonuclease Dicer
gi|38679195|gb|AAR26432.1| dicer [Bos taurus]
Length = 1923
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 172/373 (46%), Gaps = 81/373 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1614
Query: 601 AERLVN---------------------------------------VRHL-------ESLL 614
+ L +RHL E +
Sbjct: 1615 QKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEKKI 1674
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1735 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1790
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E V++ P++ P+I + +
Sbjct: 1791 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANV 1850
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
P REL E + + +GK VTVEV G K AK A
Sbjct: 1851 PRSPVRELLE--MEPEITKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAA 1905
Query: 838 SKEVLKSLKASFP 850
++ L+SLKA+ P
Sbjct: 1906 ARRALRSLKANQP 1918
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQ-QLFKTYQNHHEGLLSVKKDRIISNAA 495
+L+A+T +GF+LE LE LGDSFLK+A + L + HEG LS + + +SN
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNCN 1356
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIP 522
L +LG LP + FDP + +P
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDPPVNGLP 1383
>gi|387015528|gb|AFJ49883.1| Endoribonuclease Dicer-like isoform 1 [Crotalus adamanteus]
Length = 1917
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 177/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV D V Y F Q
Sbjct: 1549 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWDNVLCSYRDHFNNQ 1608
Query: 601 -----------------------------------------AERLVN-----VRHLESLL 614
AE +N + E +
Sbjct: 1609 QKHSSVNCISATLANQETSHYKDLVYGCLKIPPRCMFDHPDAETTLNHLISGFENFEKKI 1668
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1669 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1728
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1729 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1784
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DS + E+V++ P++ P+I + +
Sbjct: 1785 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSEMSLEMVWQVYYPMMRPLIEKFSANV 1844
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1845 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1898
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1899 AARRALRSLKANQP 1912
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1296 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1355
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1356 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1383
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1292 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1344
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1345 MRSKKVSN 1352
>gi|195425457|ref|XP_002061021.1| GK10670 [Drosophila willistoni]
gi|194157106|gb|EDW72007.1| GK10670 [Drosophila willistoni]
Length = 1720
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 225/530 (42%), Gaps = 130/530 (24%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S+ L AIT+ C + F +E LE LGDSFLK +A+ L + N +EG+L+ K ++SN
Sbjct: 1198 SEFLTAITSSGCSDVFDMERLELLGDSFLKMSATLYLSSIHSNWNEGVLTQIKSTLVSNR 1257
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG-----------------------DNSGSYE 530
L + +P I + F PK W PG N + +
Sbjct: 1258 NLLYCMNETDIPSRINSTLFTPKYTWKPPGLSLPHNILNLWQEQPEVAKFVLPRNLCALQ 1317
Query: 531 LNDHSLFNERKI----------------------------YVTGRKKVKSKTVADVVEAL 562
L + +F+ K+ + G+ K+ +K VAD +EAL
Sbjct: 1318 LTEEEIFSLGKLTPANFEKFLESCQANTNYTSTDYESEMNFCIGKSKLSNKVVADTLEAL 1377
Query: 563 IGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYERQFQVQ-------AER--------LV 605
+G + G G L+ GI +VD + P + +Q A+R L+
Sbjct: 1378 LGVIVKNYGVQHGFRILEYFGICKQVD-IGKPLSQLLDLQLGSTRTRADRDPREIDGLLI 1436
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D + L++ALTH S + CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1437 NYHYLERNLGYTFKDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFERN 1496
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE------- 718
++PG LTD+RSA VNN A V+H H IL + L + IN VD E
Sbjct: 1497 IRMNPGQLTDLRSALVNNTTLACICVRHRFHLFILAENTLLTESINSFVDFQEKHMHRVT 1556
Query: 719 ---RLSLE-------------------------------STFGWESETSFPKALGDIIES 744
R+ LE PKALGD++E+
Sbjct: 1557 HHVRILLEENDIQCHNPLDEEDELEMADNLSTNDEPLAKGNLNMSENVDVPKALGDVVEA 1616
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEYCQKHHFSMKKTVAP 802
L A+++D + + +E + L EP + + + P R+LNE H K +P
Sbjct: 1617 LIAAVYLDCK-DLQKTWEVVYRLFEPELIEFSRNVPINPLRQLNE-----HRLAKPIFSP 1670
Query: 803 RI--NGKAAV---------TVEVHANGTLFKHTHADADKETAKKVASKEV 841
I GK V T++V+ GT A K +K+A E
Sbjct: 1671 AIMDEGKVMVSCLFTCNEKTIKVYGFGTNNSQAKLAAAKHALRKLAKSEA 1720
>gi|170091728|ref|XP_001877086.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648579|gb|EDR12822.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1358
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 148/544 (27%), Positives = 233/544 (42%), Gaps = 107/544 (19%)
Query: 348 LLNGRRIFHAQNYL---SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPS 404
++ R+ +N+L SK + P+K L PELC P S T + +PS
Sbjct: 752 IIQVERVSPVENHLDPTSKPLTPPSKAPAKY---LIPELCAKFTLPAS--TLRTALLLPS 806
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLK 464
IM R+ LL+ L DH ++ + S + ++ E LE LGD+FLK
Sbjct: 807 IMRRIDDLLIVKELNARFFDHAIREDLLHVS-----LCAPSAGLEYNYERLELLGDAFLK 861
Query: 465 YAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG- 523
Y + +F +EG L + + ++ISN +L + LP +I+ +PF K W P
Sbjct: 862 YLCTIYVFVAEPTQNEGSLHIARQKLISNKSLLENSNLIGLPVYIQAKPFPAKSWQPPNF 921
Query: 524 -----------DNS--------------------GSYE-----------------LNDHS 535
D S G++ +N+ S
Sbjct: 922 RLTPRTSKMIVDKSDEEAFTPMILGSEMSSDVVEGAFTRTSTACNPHVSGVDLAVINETS 981
Query: 536 LFNERKIYVTGRKKVK-------------SKTVADVVEALIGAFLSTGGENVGLIFLDRI 582
NER G+K K K VADVVEA+IGA +GG L +
Sbjct: 982 DVNERDPPFYGKKNKKKARQDEQSSQWLGDKAVADVVEAIIGAAYISGGRETALQVTKAL 1041
Query: 583 GIKVDFVN-----------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHG 631
I + +N P + +++ E + +E ++ ++F+ P LL +ALTH
Sbjct: 1042 AIPISNINRWSDFGRNVSTPPPDASAKLRPE---STSAIERIIGHNFQRPHLLAQALTHS 1098
Query: 632 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSV 691
S M Y RLEF+GDA+LD+++ +++N+ TLSPG LT ++ A V+N A V
Sbjct: 1099 S-MQGHESASYGRLEFIGDAILDFMVIQHIFNRDQTLSPGALTLLKGAMVSNSALAAVCV 1157
Query: 692 KHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF----------PKALGDI 741
GL KH+L S +L I + + + + E E PKAL D+
Sbjct: 1158 SSGLRKHLLFESYQLAGSIEVYANELKARQQKEYLAAEREGRSPGQYWLGIEPPKALSDV 1217
Query: 742 IESLSGAIFVD---SGCNKEVVFESI-RPLLEPMITPETMRLQPARELNEYCQK---HHF 794
+ES+ GAI++ + E +F ++ +P + IT +T+ P + L E Q H F
Sbjct: 1218 VESIIGAIYISDDFTPIGAERLFNNVLKPFYDKHITLQTLSHHPTKILFELFQAQGCHLF 1277
Query: 795 SMKK 798
+ K
Sbjct: 1278 EISK 1281
>gi|449280710|gb|EMC87946.1| Endoribonuclease Dicer [Columba livia]
Length = 1922
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 177/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDFVNV----------- 591
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGALCATRENCNSE 1613
Query: 592 ---PYERQFQVQ-----------------------------AERLVN-----VRHLESLL 614
P F AE+ +N + E +
Sbjct: 1614 QKNPSPNSFSASVANSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1673
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1674 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1733
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1734 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1789
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1790 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1849
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1850 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1903
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1904 AARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1386
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1295 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1347
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1348 MRSKKVSN 1355
>gi|254281220|ref|NP_001123390.2| endoribonuclease Dicer [Xenopus (Silurana) tropicalis]
gi|238064965|sp|B3DLA6.2|DICER_XENTR RecName: Full=Endoribonuclease Dicer
gi|169261418|gb|ACA52289.1| endoribonuclease [Xenopus (Silurana) tropicalis]
Length = 1893
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 177/369 (47%), Gaps = 80/369 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 586
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1528 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPEVRKLVTNTNVISASSSYQNS 1587
Query: 587 -----------------------DFVNVPYERQFQ-VQAERLVN-----VRHLESLLNYS 617
++ +P F+ AE+ ++ + E +NY
Sbjct: 1588 TRDNCTLTARTNTDLSSCKGIDYGYLKIPPRCMFEHPDAEKTLDHLISGFENFEKKINYP 1647
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+R
Sbjct: 1648 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1707
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE---- 731
SA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1708 SALVNNTIFASLAVKYDYHKYFKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRS 1763
Query: 732 ---------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--Q 780
PKA+GDI ESL+GAI++DSG + E V+ P+++P+I + +
Sbjct: 1764 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPRS 1823
Query: 781 PARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASK 839
P REL E + + K + A R +GK VTVEV G K AK A++
Sbjct: 1824 PVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAAR 1877
Query: 840 EVLKSLKAS 848
L+SLKA+
Sbjct: 1878 RALRSLKAN 1886
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1274 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1333
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG------DNSGSYELNDHS 535
+LG P + FDP + W+ PG NS +E N+ S
Sbjct: 1334 YRLGKKKGSPSRMVVSIFDPPVNWLPPGYIVNQDKNSDKWESNETS 1379
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1270 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1322
Query: 676 MRSASVNN-DCYALSSVKHGLHKHILHASQELYKWI 710
MRS V+N + Y L K + ++ W+
Sbjct: 1323 MRSKKVSNCNLYRLGKKKGSPSRMVVSIFDPPVNWL 1358
>gi|353227266|emb|CCA77779.1| hypothetical protein PIIN_03414 [Piriformospora indica DSM 11827]
Length = 1418
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 192/402 (47%), Gaps = 29/402 (7%)
Query: 399 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETL 458
F+ +P + H L S+ A LL + + + +EA+T + F+ + LETL
Sbjct: 898 FSSLPPLFHLLSSVYRA-----RLLHSRLGVPELDLDRTIEALTIPQACASFNNQRLETL 952
Query: 459 GDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM 518
GDSFLK A + + + + HEG L+ + + N L G L F+ EP
Sbjct: 953 GDSFLKVATTIHVLNKFPHKHEGQLTSLRQNSVCNRYLLGRGHAQNLVSFMNIEPNSQSR 1012
Query: 519 WMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 578
W I S Y +N S F ER I ++V D +EAL+G +GG+ GL
Sbjct: 1013 WRI-TPVSTKY-INSRS-FVERVI--------PRRSVQDCMEALLGVAWLSGGDKAGLRV 1061
Query: 579 LDRIGIKVDFVNVPYERQF---QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML 635
R+G+ VP+ ++ ++ LE L Y+F+D SLLVEALTH S++
Sbjct: 1062 GTRLGLCFGG-TVPWAERYPKVELAFSSSSPFPPLEENLGYTFKDKSLLVEALTHPSFVS 1120
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV-NNDCYALSSVKHG 694
YQRLEFLGDAVLD + + ++ YP + G LT R+ V N+ AL + K
Sbjct: 1121 GSA--SYQRLEFLGDAVLDLVTVEHFFHLYPNATSGKLTRARARCVCNSTLSALGTKKLE 1178
Query: 695 LHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
+HK + + L N T F + PKALGD++E+L GA+FVDSG
Sbjct: 1179 IHKAMFCDAISLVAAANKTARMFNSMDFTQVIDNIWRLDAPKALGDMVEALIGAVFVDSG 1238
Query: 755 CN----KEVVFESIRPLLEPMITPETMRLQPARELNEYCQKH 792
N K+VV + +L+ I P+ M L P E + KH
Sbjct: 1239 WNYNIVKDVVIRLFKEVLD-YIHPD-MPLDPTSEFMIWVAKH 1278
>gi|254281274|ref|NP_001156875.1| endoribonuclease Dicer [Taeniopygia guttata]
Length = 1921
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 179/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 588
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGTLCATRENCNSE 1612
Query: 589 ----------------------------VNVPYERQF-QVQAERLVN-----VRHLESLL 614
+ +P F AE+ +N + E +
Sbjct: 1613 QKNLSPNSVAASVVNSEPSLCKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1672
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1788
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1849 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1902
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|94957752|ref|NP_001035555.1| endoribonuclease Dicer [Gallus gallus]
gi|257051054|sp|Q25BN1.3|DICER_CHICK RecName: Full=Endoribonuclease Dicer
gi|90074858|dbj|BAE87103.1| Dicer protein [Gallus gallus]
Length = 1921
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 179/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 588
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATGENCNSE 1612
Query: 589 ----------------------------VNVPYERQF-QVQAERLVN-----VRHLESLL 614
+ +P F AE+ +N + E +
Sbjct: 1613 QKNLSPNSVSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1672
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1788
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1849 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1902
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|443922458|gb|ELU41905.1| dicer-like protein 1 [Rhizoctonia solani AG-1 IA]
Length = 1426
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 211/870 (24%), Positives = 357/870 (41%), Gaps = 142/870 (16%)
Query: 71 KQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQKHGN-EPYDAEHPI--YFPPELV--- 124
+ +AC AC L +G L + P + KHG +P I Y+PP L
Sbjct: 553 RSSACFRACFTLFNLGLLPSSFFPSRPLH---TWKHGILQPPKNRVAIDTYYPPVLPLFW 609
Query: 125 -NQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTV 183
N ++ YLI+ + ++L +R L +IK+ F + ++ L V
Sbjct: 610 HNCLLAAPSKLFYPYLIQFSMGSQTGL-YPSMILLIRIPL-GDIKE--FSVFPNQTELKV 665
Query: 184 NLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD----KLNEILKGLWLRDNLEIDYLL 239
+L + L ++V L R+ + L+R++ + D +L + + N E +
Sbjct: 666 SLSQCAPLSLITEQVELAFRYTLNLWRILGNKQYDSPSGELAYFVLPVKFGPNFEPTRIA 725
Query: 240 LPAS-EQSIDWEPVASL-SF---PCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSV 294
S E I W+ V L SF P M+ V+Q +S
Sbjct: 726 RTTSIEPCISWQEVNDLVSFRVRPLKCNNVDEMWLDLMNG--VIQDRSNEFT-------- 775
Query: 295 VCTPHSGQIYYITGVLGHLNANSLFTRNDGGAIT------YKKHYEERYGIQLCFDQELL 348
+ + + LN SL ++ G Y+ H E GIQ Q+ L
Sbjct: 776 -------RRFENAKLRKDLNPLSLIMQDKPGEPQISLLDYYRTHRHEFEGIQNL--QQPL 826
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPS--KISFELPPELCRIIMGPMSLSTFYSFTFVPSIM 406
+ + N L+ +EP+ K + L PE+C + P TF + + +PS++
Sbjct: 827 IEATLLPGLANQLNP------QEPTVQKTTNYLVPEICYVSSIPAP--TFRTASLLPSVI 878
Query: 407 HRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLG------- 459
++++L+A + +Q+ V A+ ++ F E LE LG
Sbjct: 879 WHIENVLIAKEVNLTFFQGQIQD-----ELVAHALCSRMAHRTFSYERLEFLGRHHIVPH 933
Query: 460 -----------DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
D+F+KYAAS L+ G+L K+ ++++N +L LP
Sbjct: 934 MFDSMRLIYAGDTFIKYAASAYLYGVEPTAPSGVLHSKRQKMVNNRSLWLGAQALGLPPC 993
Query: 509 IRTEPFDPKMWMIP-----------GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
I+++ F PK W+IP G+N G L N R+ +++ KT+AD
Sbjct: 994 IQSDVFRPKQWVIPNVLISKKSPIHGENPGF--TGQAQLLNSRQY----SRQIPPKTIAD 1047
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNV----PYERQFQVQAE-RLVNVR 608
VVEA+IGA L +GGE + +G D+++V P + +++ + +
Sbjct: 1048 VVEAMIGAALLSGGEELAFSVAKTLGFDTLKTCDWLDVISYAPNKSMTMKESDHKGETLD 1107
Query: 609 HLESLLNYSFRDPSLLVEALT------------------HGSYMLPEIPRCYQRLEFLGD 650
L ++ S +P LL++A+ H S + Y+RLEFLGD
Sbjct: 1108 GLIKIIGVSLDNPELLLQAMVRIFLSIIKLEVQLRTVQQHAS--MARSSESYERLEFLGD 1165
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVLD L+ ++ SP +T ++S+ V+N A+ ++ GLH++++H L + I
Sbjct: 1166 AVLDMLVVQSFFSDEEEWSPHSMTLIKSSMVSNRALAIICIESGLHQYLMHDINSLAQSI 1225
Query: 711 NITVDSFE------RLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN----KEVV 760
+D + R + W S+ PKALGD++ESL GAI++ SG + K V
Sbjct: 1226 VTFIDEVQKCKQIARTDAQRLKYW-SKLVAPKALGDVVESLLGAIYISSGFSITRVKTVY 1284
Query: 761 FESIRPLLEPMITPETMRLQPARELNEYCQK---HHFSMKKTVAPRINGKAAVTVEVHAN 817
++P + I + M P L + + F + K NG EV +
Sbjct: 1285 DRVLKPFYDRYIDKKAMLTHPMSRLMKRLESIGCRSFGVAKAETQLPNGGTGFKCEVKIH 1344
Query: 818 GTLFKHTHADADKETAKKVASKEVLKSLKA 847
G + A + A K A++ L L A
Sbjct: 1345 GQIIAQA-ASEKAQQAIKDATERALNLLDA 1373
>gi|326920976|ref|XP_003206741.1| PREDICTED: endoribonuclease Dicer-like [Meleagris gallopavo]
Length = 1921
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 179/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 588
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKSDWESTLCPTGENCNSE 1612
Query: 589 ----------------------------VNVPYERQF-QVQAERLVN-----VRHLESLL 614
+ +P F AE+ +N + E +
Sbjct: 1613 QKNLSPNSVSACIVNSEPFLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1672
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1788
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1849 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1902
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|380706515|gb|AFD97515.1| dicer, partial [Hymenolepis microstoma]
Length = 1897
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 221/482 (45%), Gaps = 85/482 (17%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+++T + ++E LET+GDSFLK+A + L+ Y + EG LS+ + ++ N+ L
Sbjct: 1417 ILQSLTRLAAGDFINMERLETIGDSFLKFAVTTYLYLKYPDAQEGSLSLFRSHVVENSNL 1476
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTV 555
+ GC KLPG I F+P+ W+ P N + + R V + + +K++
Sbjct: 1477 YRFGCGKKLPGRIVGVAFEPQENWLPPC--YVCNSDNSSADDSSRLQMVQTHQFLSNKSI 1534
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKV-----------DFVNVPYERQF----QVQ 600
AD VEAL+G +L+ GE L L G++ +P ER +++
Sbjct: 1535 ADCVEALVGCYLTERGERSALKLLQWFGVECLPPSSEMQPTGAPWKMPDERGLTEAEKIE 1594
Query: 601 AERLVNVRH---LESLLNYSFRDPSLLVEALTHGS----YMLPEIPRC----------YQ 643
+R+ +V LE+ + Y F++ LL+EALTH + + P + Y+
Sbjct: 1595 IDRIYHVSRYDKLENTIGYRFKNRRLLIEALTHSTCRDLHSNPSVNNTPSSVFFGNGGYE 1654
Query: 644 RLEFLGDAVLDYLITVYLYNKYP-----TLSPGDLTDMRSASVNNDCYALSSVKH-GLH- 696
RLEFLGDAVLDY +T L+ LSPG LTD+RSA VNN + +V H GLH
Sbjct: 1655 RLEFLGDAVLDYTVTRVLFESTDGETVRELSPGGLTDLRSALVNNAVFGALAVTHCGLHA 1714
Query: 697 -----------------KHILHA------SQELYKWINITVDSFERLSLESTFGW----- 728
+HI + S+ L + TV ++ G
Sbjct: 1715 YLRGTAPYLTEGTSAFLRHIRNVSRGSLNSKRLLTPDSNTVARLNDAENQADSGAVRPSN 1774
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARE-L 785
E E PKALGD+ ESL+GA+F+DSG ++ PLL I + P R L
Sbjct: 1775 EMEAEVPKALGDVFESLAGAVFLDSGLCLNTLWRIFFPLLRERIERYSTCVAKSPVRRLL 1834
Query: 786 NEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG---------TLFKHTHADADKETAKKV 836
+Y ++ F K V P +GK + V V G L K AD AK+
Sbjct: 1835 EQYPERVKFE-KPMVRP--DGKIRLVVRVVGIGRYVGIGRTYRLAKSAAADLAYRRAKEA 1891
Query: 837 AS 838
A+
Sbjct: 1892 AN 1893
>gi|403417815|emb|CCM04515.1| predicted protein [Fibroporia radiculosa]
Length = 1463
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 219/458 (47%), Gaps = 51/458 (11%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA------VNLKNMLLDHCMQNVTI 432
P LCR +S F +F +P + HR+ + A + L ++ D +Q +T+
Sbjct: 901 FPLSLCR--RAEISEDVFRAFHVLPELCHRITDVYRAHTARIELGLPPIVDDLLVQALTL 958
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
P++ GF+ + LETLGDS LK A LF Y + HEG L V + +S
Sbjct: 959 PSANA-----------GFNNQRLETLGDSVLKLATVVYLFNKYPHRHEGQLDVLRRNSVS 1007
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS 552
N L + L ++ +EP ++W L D LF + YV +
Sbjct: 1008 NRTLLARAKEVGLEQYLSSEPQSVRLWRYTA-------LPDRDLFEPYR-YVP--RVFPR 1057
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ-AERLVNV--RH 609
+++ D +EAL+GA GG + L +G+ +P+ ++ Q AE V V
Sbjct: 1058 RSLQDCMEALLGAAFVAGGIPMALRAGTALGLSFGG-PLPWNARYGGQIAESPVTVLFTD 1116
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L+ L Y FR LL+EA+TH S+ E YQRLEFLGDA++D + YLYNK+P +
Sbjct: 1117 LQDTLGYRFRCGKLLLEAVTHPSFGAAET-SSYQRLEFLGDALIDLTVMRYLYNKFPEAT 1175
Query: 670 PGDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLESTF-- 726
G L+ RS +V A +VK GL K +L + EL + + E LS E
Sbjct: 1176 SGQLSWARSRAVCAPALASVAVKRLGLQKLLLVNNVELSIAMGKCIPILESLSEEEIILS 1235
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKE----VVFESIRPLLEPMITPETMRLQPA 782
GW+ + PKA+ D++ES+ GA+FVD N E + + + LLE ++TPE R P
Sbjct: 1236 GWKQDP--PKAMSDVLESVLGAVFVDLDFNFEKASSIAEQVLNDLLE-VLTPELPR-DPV 1291
Query: 783 RELNEY-----CQKHHFSMKKTVAPRINGKAAVTVEVH 815
L + C++ + K + P + +++V VH
Sbjct: 1292 SNLMVWVAQAGCRRVTYR-KSSSRPDVKRNDSISVVVH 1328
>gi|256087296|ref|XP_002579808.1| dicer-1 [Schistosoma mansoni]
Length = 2174
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 173/356 (48%), Gaps = 63/356 (17%)
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI------------------- 584
+T ++ + K++AD VEALIG +L+T GE L + GI
Sbjct: 1808 ITIQQAIPDKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSL 1867
Query: 585 -KVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY---------- 633
K ++++ R +A + LES LNY+F+DPSLL++A TH SY
Sbjct: 1868 PKSNYLDTDENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSN 1927
Query: 634 --------MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
M CYQRLEFLGDAVLDY+IT +LY SPG LTD+RSA VNN+
Sbjct: 1928 NLSDQSNLMFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNI 1987
Query: 686 YALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE------------STFGWESETS 733
+A +V+ GLHK+ +S +L T+D F R S +T +
Sbjct: 1988 FAALAVRIGLHKYFRASSPQLLH----TIDVFVRKSNNANNTIPTNTGHLTTNRLSDDVE 2043
Query: 734 FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEY-CQ 790
PKAL DI ESL+GAIF+DS + + V++ P+++ I T + P R+L E +
Sbjct: 2044 IPKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKERIERYTACIPKSPVRQLLELEPE 2103
Query: 791 KHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
F + + ++G+ +V V G + + AK +A+K L+ L+
Sbjct: 2104 GTKFERARRM---VDGRISVCAHVLGKGRFYG---VGRNYRLAKSLAAKRALRVLR 2153
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
PT+ +L+A+T + +LE +ET+GDSFLK+ + L+ TY HEG LS + RI+
Sbjct: 1634 PTT-ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVC 1692
Query: 493 NAALCKLGCDHKLPGFIRTEPFDP-KMWMIPGDNSGSYELNDHSLFNE 539
N+ L +LG L + F+P + W+ P G Y D L NE
Sbjct: 1693 NSNLYRLGKAKDLQNRMIGCKFEPHENWIPP----GYYVRQDKRLNNE 1736
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV-NNDCYALSSVKHGLHKHILH 701
+R+E +GD+ L +++TV+LY YP G L+ +RS V N++ Y L K ++ I
Sbjct: 1653 ERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCNSNLYRLGKAKDLQNRMIGC 1712
Query: 702 ASQELYKWI 710
+ WI
Sbjct: 1713 KFEPHENWI 1721
>gi|154283385|ref|XP_001542488.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410668|gb|EDN06056.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1359
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 230/516 (44%), Gaps = 55/516 (10%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R +Q + ++ + PE RI + P+I+ R++S L+++ + L
Sbjct: 841 RATEQERGEETAYYICPEPLRI--SALPPPVAAFAFAFPAIISRIESYLISLEACDKL-- 896
Query: 425 HCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQ 470
++I T LEA+T + +E G + E LE LGD FLK A S
Sbjct: 897 ----QLSIETHLALEALTKDSDNTEEHRKEQIHFQRGMGKNYERLEFLGDCFLKMATSIS 952
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYE 530
LF ++ E VK+ +I N L KL F+RT+ F + W G +
Sbjct: 953 LFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVRTQGFSRRNWYPEGIKLLQGK 1012
Query: 531 LNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------IFLDRI 582
S N ++ + KT+AD+ EALIGA L +GG+ +F+D
Sbjct: 1013 AQPESAQN--------KQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSD 1064
Query: 583 GIKV-------DFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-- 633
+V D ++P + Q A +L + + + L Y F P LL A TH SY
Sbjct: 1065 NHRVSDWNSYIDLYSLPSYQIAQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTHASYPS 1124
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
+P CYQRLEFLGD++LD + YLY+ YP P LT+ + A V+N +VK
Sbjct: 1125 AWSTVP-CYQRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKL 1183
Query: 694 GLHKHILHASQELYKWINITVDSFERL---SLESTFGWESETSFPKALGDIIESLSGAIF 750
GLHKH+L+ S L+ I + E S +S W + + PK L D++E+ GAIF
Sbjct: 1184 GLHKHLLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCLPDMLEAYIGAIF 1243
Query: 751 VDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAV 810
VDS + EVV + + L+ E M + A N++ M + PRI V
Sbjct: 1244 VDSNFSFEVVEDFFQRYLKQYF--EDMSIYDAFA-NKHPTAGEVQMVDSTEPRIYAAVIV 1300
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ A G +A K + +A E L S K
Sbjct: 1301 HDKFVAQGIASSVRYAKT-KASDAALAKLEGLASFK 1335
>gi|449485409|ref|XP_004157159.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 132
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 93/114 (81%)
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSM 796
LGD+IESL+GAI+VDSG +KE+VF SIRPLLEP+++PET++ P RELNE CQK ++ +
Sbjct: 15 VLGDVIESLAGAIYVDSGYDKEIVFRSIRPLLEPLVSPETLKKHPRRELNELCQKENYKL 74
Query: 797 KKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
KKTV R+NG++ VTVEV NG +FKHT D+ET +KVASKEVLKSLK ++P
Sbjct: 75 KKTVTSRVNGRSYVTVEVEVNGRIFKHTEISLDRETGEKVASKEVLKSLKEAYP 128
>gi|195109134|ref|XP_001999145.1| GI24348 [Drosophila mojavensis]
gi|193915739|gb|EDW14606.1| GI24348 [Drosophila mojavensis]
Length = 2256
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 177/379 (46%), Gaps = 66/379 (17%)
Query: 523 GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRI 582
D S E ND S F + + + K++AD VEALIGA+L G L+F+ +
Sbjct: 1880 ADLDDSNETNDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWL 1937
Query: 583 GIKV-------------------------DFVNV----PYER----QFQVQAER-----L 604
GI+V + V V P R F A R L
Sbjct: 1938 GIRVLPYQLEPAAADIEQRKPGSTKPDANNMVTVYGDWPTPRSPLLHFAPNAHRELEELL 1997
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
E+ L Y+FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1998 SGFEEFEASLGYTFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYED 2057
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
SPG LTD+RSA VNN +A +V+HG HK+ H S L N +D F R+ E+
Sbjct: 2058 PRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGL----NDVIDRFVRIQQEN 2113
Query: 725 TF--------------GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
+ PKALGD+ ES++GAIF+DS + +VV++ +++P
Sbjct: 2114 GHCISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWQVFSNMMKP 2173
Query: 771 MIT--PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHAD 827
I ++ P REL E + F + +A + VTV+V GT
Sbjct: 2174 EIEQFSNSVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIG 2228
Query: 828 ADKETAKKVASKEVLKSLK 846
+ AK A+K L+ LK
Sbjct: 2229 RNYRIAKCTAAKCALRQLK 2247
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1727 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1786
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1787 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1815
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 592 PYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
P ER + + + L+ + PS++++ALT + +RLE +GD+
Sbjct: 1697 PTERLLTDRPDAGFSFDQQPELVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDS 1753
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
L Y IT YLY Y + G L+ +RS V N
Sbjct: 1754 FLKYAITTYLYITYENVHEGKLSHLRSKQVAN 1785
>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
Length = 1441
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 230/517 (44%), Gaps = 74/517 (14%)
Query: 385 RIIMGPMSLST-------FYSF-TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK 436
R+I P+S +T F F +PS++H L+ L+A L LL+ N+T
Sbjct: 935 RVI--PLSWATADSIPLKFAQFGMLIPSLIHELEVTLIAKELSTTLLERI--NIT-DLGL 989
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
V EAI+++ E + E LE LGDS LKY + Q+ + EG LS KDR++ N+ L
Sbjct: 990 VREAISSRSAAEPVNYERLEFLGDSILKYCTAIQVSAIHPEWPEGYLSFFKDRLVGNSRL 1049
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ D L FI T+ F + W L++++ N K+ +K+ +KT+A
Sbjct: 1050 SRAAIDVGLAKFILTKSFTGQKWR-------PLYLDNYT-GNPGKV---SPRKISTKTLA 1098
Query: 557 DVVEALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNV----- 607
DVVEALIGA GG +N +F++ I + +V R + R +V
Sbjct: 1099 DVVEALIGASYINGGITKAQNCISLFVNEI----QWQDVSANRALFFKMARDQDVLPAEL 1154
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
+ LE L+ Y F+ SLL+EA+TH S M R Y+ LEF+GDA+LD++I +Y P
Sbjct: 1155 KPLEHLVGYQFKKKSLLIEAMTHQSCMFDYNRRSYEHLEFIGDAILDFIIVRKMYTAGPL 1214
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKH-----------------------GLHKHILHASQ 704
L+P + +++A VN D A S+ H L + H+S+
Sbjct: 1215 LAPYQMHSLKTAMVNGDFLAFLSLDHQMRRTETAVTSSLQIIDKETTPLALWTFMRHSSE 1274
Query: 705 ELYKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSGAIFVDSG 754
+ T+ +E L E + +P AL DI ESL GA++VDSG
Sbjct: 1275 AIGIEQAATLKRYEALRGEILAALRQGSRYPWALLARLQAKKFYSDIFESLLGAVWVDSG 1334
Query: 755 ----CNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAV 810
C + + +L+ ++ P L + + V +G+ A
Sbjct: 1335 SIELCECMLQKFGVLSILDRLLKDRVAVQHPKEVLGKMAVTQTVTYDVDVQEAPDGEKAF 1394
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
T V + +E K A++E ++ L A
Sbjct: 1395 TCRVLMGEKVVTEVVDGVTREEVKTKAAEEAIRILGA 1431
>gi|327355811|gb|EGE84668.1| hypothetical protein BDDG_07613 [Ajellomyces dermatitidis ATCC 18188]
Length = 1509
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 199/437 (45%), Gaps = 66/437 (15%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R+ +Q + ++ + PE RI + P+I+ RL+S L+++ +ML
Sbjct: 968 RETEQEKGEGTTYYICPEPLRI--SALPAPVAAFAFAFPAIISRLESYLISLEACDML-- 1023
Query: 425 HCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQ 470
++ I T LEA+T + +E G + E LE LGD FLK A S
Sbjct: 1024 ----HINIKTHLALEALTKDSDNTEEHRGEQIHFQRGMGKNYERLEFLGDCFLKMATSIS 1079
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-----DN 525
LF ++ E VK+ +I N L KL FIRT+ F + W G
Sbjct: 1080 LFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEFIRTQGFSRRNWYPEGIKLLQGK 1139
Query: 526 SGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK 585
+ S N HSL + KT+AD+ EALIGA L +GG+ F +
Sbjct: 1140 AKSESQNKHSLGD--------------KTIADICEALIGASLLSGGK--AHRFDSAVKAV 1183
Query: 586 VDFVN-----------------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEAL 628
FVN +P + Q A +L + + L Y FR P LL A
Sbjct: 1184 TTFVNSDDHRASEWNCYVNLYSLPDYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAF 1243
Query: 629 THGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
TH S+ +P CYQRLEFLGD++LD + YLY++YP P LT+ + A V+N
Sbjct: 1244 THASFPSAWSRVP-CYQRLEFLGDSLLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFL 1302
Query: 687 ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF---GWESETSFPKALGDIIE 743
+VK GLH+H+++ S L I V+ E +S W + + PK L D++E
Sbjct: 1303 GAVAVKLGLHRHLIYFSNALLGQITRYVEEIELAEADSNNSPDAWTTTSDPPKCLPDMLE 1362
Query: 744 SLSGAIFVDSGCNKEVV 760
+ GAIFVDS EVV
Sbjct: 1363 AYIGAIFVDSNFKFEVV 1379
>gi|299747526|ref|XP_001837094.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
gi|298407559|gb|EAU84711.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
Length = 1499
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 240/568 (42%), Gaps = 93/568 (16%)
Query: 361 LSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKN 420
+ + +E + + + L PELC P S+ F + +PSI+ +L L + L
Sbjct: 905 IRRTEKEGHQTKGQQNANLIPELCAKCTIPASM--FRTSYLIPSILWKLDHLFVVKELNM 962
Query: 421 MLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHE 480
D+ I + A TT + + E LE LGD+FLKY AS +F +E
Sbjct: 963 QFFDNA-----IDEELLYMATTTVSAEMEHNYERLELLGDAFLKYLASVVVFVMNPTQNE 1017
Query: 481 GLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMI---------------PGDN 525
G L V + R+ISN AL LP +I ++PF + W PG
Sbjct: 1018 GSLHVARQRLISNKALLACATQVGLPAYICSKPFLLRGWRPWPSASFTEISKAPDKPGTG 1077
Query: 526 SGSYELN--------------------DHSLFNERKIYVTGRKKVKSK------------ 553
E++ DH + + G K S+
Sbjct: 1078 VAEQEVDTCKARAQNESAGESQTPPSADHDKQDSDQEVEEGAKTESSQKKRKRKKWKDPM 1137
Query: 554 -----------TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAE 602
+ADV EA+IGA +GG L + I + +N + QV
Sbjct: 1138 NQNLQNLGDKKAIADVTEAIIGAAYVSGGRETALDVAKALSIPIPGINTWSDLGMQVVIP 1197
Query: 603 --------RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 654
R ++ +E ++ + F+ P LL + LTH S ++ Y+RLEF+GDA+LD
Sbjct: 1198 FTTDAIELRPGSIEAVEGIIGHRFQQPHLLAQILTHTSVHGSKV-LTYERLEFIGDAILD 1256
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
+++ +++++ TLSPG LT ++ A V N A + G++KH++ S +L I
Sbjct: 1257 FMVIRHIFDRERTLSPGGLTMLKGAMVANSTLATVCILSGIYKHLVFGSYQLSSAIEDYA 1316
Query: 715 DSF-ERLSLESTFGWESETSF----------PKALGDIIESLSGAIFV-DSGC--NKEVV 760
++ ER E E E PKAL D+IES+ GA+++ D+ C E
Sbjct: 1317 EAINERADKEYALA-EQENRMPGQFWPDIEPPKALSDVIESIIGALYISDNFCPVGTEAF 1375
Query: 761 FESI-RPLLEPMITPETMRLQPARELNEYCQKHHF-SMKKTVAPRINGKAAVTVEVHANG 818
F+ + RP + I+ T+ P + L EY Q H +K + P+ G ++ E+ +
Sbjct: 1376 FDKVLRPFFDKHISLRTLTHHPTKTLFEYIQAHGCQQLKLSKGPQQKG-GKMSCEILVHE 1434
Query: 819 TLFKHTHADADKETAKKVASKEVLKSLK 846
T+ + +D A + AS L K
Sbjct: 1435 TVCA-SASDVSLSVAAREASTRALDRFK 1461
>gi|261198280|ref|XP_002625542.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
gi|239595505|gb|EEQ78086.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
Length = 1522
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 199/437 (45%), Gaps = 66/437 (15%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R+ +Q + ++ + PE RI + P+I+ RL+S L+++ +ML
Sbjct: 981 RETEQEKGEGTTYYICPEPLRI--SALPAPVAAFAFAFPAIISRLESYLISLEACDML-- 1036
Query: 425 HCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQ 470
++ I T LEA+T + +E G + E LE LGD FLK A S
Sbjct: 1037 ----HINIKTHLALEALTKDSDNTEEHRGEQIHFQRGMGKNYERLEFLGDCFLKMATSIS 1092
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-----DN 525
LF ++ E VK+ +I N L KL FIRT+ F + W G
Sbjct: 1093 LFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEFIRTQGFSRRNWYPEGIKLLQGK 1152
Query: 526 SGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK 585
+ S N HSL + KT+AD+ EALIGA L +GG+ F +
Sbjct: 1153 AKSESQNKHSLGD--------------KTIADICEALIGASLLSGGK--AHRFDSAVKAV 1196
Query: 586 VDFVN-----------------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEAL 628
FVN +P + Q A +L + + L Y FR P LL A
Sbjct: 1197 TTFVNSDDHRASEWNCYVNLYSLPDYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAF 1256
Query: 629 THGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
TH S+ +P CYQRLEFLGD++LD + YLY++YP P LT+ + A V+N
Sbjct: 1257 THASFPSAWSRVP-CYQRLEFLGDSLLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFL 1315
Query: 687 ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF---GWESETSFPKALGDIIE 743
+VK GLH+H+++ S L I V+ E +S W + + PK L D++E
Sbjct: 1316 GAVAVKLGLHRHLIYFSNALLGQITRYVEEIELAEADSNNSPDAWTTTSDPPKCLPDMLE 1375
Query: 744 SLSGAIFVDSGCNKEVV 760
+ GAIFVDS EVV
Sbjct: 1376 AYIGAIFVDSNFKFEVV 1392
>gi|328773741|gb|EGF83778.1| hypothetical protein BATDEDRAFT_85615 [Batrachochytrium dendrobatidis
JAM81]
Length = 1746
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 159/603 (26%), Positives = 252/603 (41%), Gaps = 68/603 (11%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFT--RNDGGAITYKKHYEERYGIQLCFDQELLLNG 351
+V TPH+ Y I + NA S T + G IT + G + LL
Sbjct: 1153 IVYTPHNNIKYQIKCWSENCNAYSELTIGKGKGQHITTYQAIASSQGYTVDHPNANLLKC 1212
Query: 352 RRIFHAQNYLSKCRQEKQR----EPSKISFELP---PELCRIIMGPMSLSTFYSFTFVPS 404
RI H ++Y C+ K + + ++ LP P+ R+ P+S ++PS
Sbjct: 1213 VRIPHIKDYRRSCQATKNKHNCVDDNQNLDNLPQLVPDAFRV--SPISAKLTMVAHYLPS 1270
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLK 464
I++ L + LA + Q IP S ++ A TT + E LETLGD LK
Sbjct: 1271 ILYSLHTACLAAEFDQKYGLYPKQ---IPLSTLMSAFTTPAANSITNYERLETLGDKVLK 1327
Query: 465 YAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGD 524
+ + L +YQ++ G LS ++SN L ++ H L G + T PF W P
Sbjct: 1328 FGVAHYLHSSYQSYEVGQLSTILSGLVSNKNLFEIAQQHSLTGMLNTAPFQSNSWTPP-- 1385
Query: 525 NSGSYELNDHSLFNERKIYVTGRKKVK--------SKTVADVVEALIGAFLSTGGENVGL 576
S E +I+V V K +D +EAL+GA+ G L
Sbjct: 1386 ----------SFCFETRIFVAPTASVDCLDNRVFCGKKQSDFIEALLGAYFLECGVEAAL 1435
Query: 577 IFLDRIGIKVDF---------VNVPYERQFQVQAERLVN------VRHLESLLNYSFRDP 621
+ + + N ++ Q +++ V H++ L+Y+F +P
Sbjct: 1436 HLMRTFRLINEIPPHCFRHGDTNKLHDHQISSMQNPILSRLDQETVDHVQQKLSYNFHNP 1495
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
LL+ AL Y + ++RLEFLGDA++D L+ Y Y Y P L+ M A+V
Sbjct: 1496 ELLLIALMTPFYF---VKSKFERLEFLGDAIMDILVARYFYRHYKHADPCSLSKMIQATV 1552
Query: 682 NNDCYALSSVKHGLHKHILHASQ-------ELYKWINITVDSFERLSLESTFGWESETSF 734
+ V LH+H+L +SQ + + N +S + + + +
Sbjct: 1553 CKPAFCKILVSLKLHEHLLQSSQLSQHSKEAIVLYANYIQNSHSQHAFKQA---DKAIDG 1609
Query: 735 PKALGDIIESLSGAIFVDSGCNKE----VVFESIRPLLEPMITPETMRLQPARELNEYCQ 790
PK L D+ E + AIF+D+G N E V+F + ++ I ET+ P R+L + Q
Sbjct: 1610 PKVLCDVFEVIVAAIFIDTGYNLERTRLVIFPYVHSFIQSNINLETITEPPIRQLFAFVQ 1669
Query: 791 KHHFSMKK-TVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
FS +K ++ N V GT+ + A K AK+ AS + L LK +
Sbjct: 1670 SQGFSSEKLELSDESNADGFHKASVVFYGTVLATSQATTLK-LAKQHASIKALNVLKHTK 1728
Query: 850 PGT 852
T
Sbjct: 1729 KAT 1731
>gi|239607869|gb|EEQ84856.1| dicer-like protein [Ajellomyces dermatitidis ER-3]
Length = 1522
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 199/437 (45%), Gaps = 66/437 (15%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R+ +Q + ++ + PE RI + P+I+ RL+S L+++ +ML
Sbjct: 981 RETEQEKGEGTTYYICPEPLRI--SALPAPVAAFAFAFPAIISRLESYLISLEACDML-- 1036
Query: 425 HCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQ 470
++ I T LEA+T + +E G + E LE LGD FLK A S
Sbjct: 1037 ----HINIKTHLALEALTKDSDNTEEHRGEQIHFQRGMGKNYERLEFLGDCFLKMATSIS 1092
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-----DN 525
LF ++ E VK+ +I N L KL FIRT+ F + W G
Sbjct: 1093 LFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEFIRTQGFSRRNWYPEGIKLLQGK 1152
Query: 526 SGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK 585
+ S N HSL + KT+AD+ EALIGA L +GG+ F +
Sbjct: 1153 AKSESQNKHSLGD--------------KTIADICEALIGASLLSGGK--AHRFDSAVKAV 1196
Query: 586 VDFVN-----------------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEAL 628
FVN +P + Q A +L + + L Y FR P LL A
Sbjct: 1197 TTFVNSDDHRASEWNCYVNLYSLPDYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAF 1256
Query: 629 THGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
TH S+ +P CYQRLEFLGD++LD + YLY++YP P LT+ + A V+N
Sbjct: 1257 THASFPSAWSRVP-CYQRLEFLGDSLLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFL 1315
Query: 687 ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF---GWESETSFPKALGDIIE 743
+VK GLH+H+++ S L I V+ E +S W + + PK L D++E
Sbjct: 1316 GAVAVKLGLHRHLIYFSNALLGQITRYVEEIELAEADSNNSPDAWTTTSDPPKCLPDMLE 1375
Query: 744 SLSGAIFVDSGCNKEVV 760
+ GAIFVDS EVV
Sbjct: 1376 AYIGAIFVDSNFKFEVV 1392
>gi|325091272|gb|EGC44582.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H88]
Length = 1432
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 200/430 (46%), Gaps = 51/430 (11%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R +Q + ++ + PE RI + P+I+ R++S L+++ + L
Sbjct: 914 RATEQERGEETAYYICPEPLRI--SALPPPVAAFAFAFPAIISRIESYLISLEACDKL-- 969
Query: 425 HCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQ 470
++I T LEA+T + +E G + E LE LGD FLK A S
Sbjct: 970 ----QLSIETHLALEALTKDSDNTEEHRKEQIHFQRGMGKNYERLEFLGDCFLKMATSIS 1025
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYE 530
LF ++ E VK+ +I N L KL F+RT+ F + W G +
Sbjct: 1026 LFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVRTQGFSRRNWYPEGIKLLQGK 1085
Query: 531 LNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------IFLDRI 582
S N ++ + KT+AD+ EALIGA L +GG+ +F+D
Sbjct: 1086 AKSESAQN--------KQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSD 1137
Query: 583 GIKV-------DFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-- 633
+V D ++P + Q A +L + + + L Y F P LL A TH SY
Sbjct: 1138 NHRVSDWNSYIDLYSLPSYQIVQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTHASYPS 1197
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
+P CYQRLEFLGD++LD + YLY+ YP P LT+ + A V+N +VK
Sbjct: 1198 AWSTVP-CYQRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKL 1256
Query: 694 GLHKHILHASQELYKWINITVDSFERL---SLESTFGWESETSFPKALGDIIESLSGAIF 750
GLHKH+L+ S L+ I + E S +S W + + PK L D++E+ GAIF
Sbjct: 1257 GLHKHLLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCLPDMLEAYIGAIF 1316
Query: 751 VDSGCNKEVV 760
VDS + EVV
Sbjct: 1317 VDSNFSFEVV 1326
>gi|425626948|gb|AFX89032.1| dicer 1 [Mayetiola destructor]
Length = 2057
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 174/355 (49%), Gaps = 67/355 (18%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-----------DFVNVP-----Y 593
+ K++AD VEALIGA L GG L+F+ +GI+V N+P +
Sbjct: 1701 IPDKSIADCVEALIGANLIEGGPRGALLFMAWLGIRVLPSKEIPFNENSLENIPGSTKPF 1760
Query: 594 ER---QFQV---------------------QAERLVNVRHL-ESLLNYSFRDPSLLVEAL 628
ER ++Q+ ER +N + E + Y F D S L++A+
Sbjct: 1761 ERDGKKYQIVYGYWASPKSPLLHFSANPYETLERFLNGYSVFEEHIGYHFNDRSYLLQAM 1820
Query: 629 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL 688
TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 1821 THASYSQNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFAS 1880
Query: 689 SSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE--------------TSF 734
+V+HG HK+ H S L N +D F R+ +E+ E
Sbjct: 1881 LAVRHGFHKYFRHLSPSL----NDVIDRFVRIQVENNHSISEEFYLISEEECDEAEDVEV 1936
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQK 791
PKALGDI ES++GAIF+DS + ++V++ +++P I +++ P REL E +
Sbjct: 1937 PKALGDIFESVAGAIFLDSNMSLDMVWKIFSNMMKPEIDQFSDSVPKSPIRELLELEPET 1996
Query: 792 HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
F + +A + VTV+V GT + + AK A+K L+ LK
Sbjct: 1997 AKFGKPEKLAD--GRRVRVTVDVFGKGT---YRGIGRNYRIAKCTAAKCALRQLK 2046
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + R +SN
Sbjct: 1515 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSRQVSNL 1574
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1575 NLYRLGRRKMLGERMIATKFEPHDNWLPP 1603
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L +YS PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1506 LNDYSGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGK 1562
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1563 LSHLRSRQVSN 1573
>gi|322707759|gb|EFY99337.1| Dicer-like protein 2 [Metarhizium anisopliae ARSEF 23]
Length = 1442
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 182/395 (46%), Gaps = 58/395 (14%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PS+MH L+ L+A L +L+ N+T V EAI+++ E + E LE LGD
Sbjct: 958 LIPSLMHELEVTLIAKELSTTILERI--NIT-DLRLVREAISSRSAAEPVNYERLEFLGD 1014
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
S LKY + Q+ + EG LS KDR++SN+ L + D L FI T+ F + W
Sbjct: 1015 SILKYCTAIQVSAIHPEWPEGYLSFFKDRLVSNSRLSRAAIDVGLAKFILTKTFTGQKW- 1073
Query: 521 IPGDNSGSYELNDHSLFNERKIYVTGR---KKVKSKTVADVVEALIGAFLSTGGENVGLI 577
L+ E G+ +K+ +KT+ADVVEALIGA GG L
Sbjct: 1074 -------------RPLYLENYTGNPGKVSPRKLSTKTLADVVEALIGASYVNGGITKALS 1120
Query: 578 FLDRIGIKVDFVNVPYERQFQVQAER-----LVNVRHLESLLNYSFRDPSLLVEALTHGS 632
+ ++ + +V R + R ++ LE L+ Y F SLL+EA+TH S
Sbjct: 1121 CISLFVNEIQWQDVSANRALFFKMARDQDKLPAELKPLEHLVGYQFNKKSLLIEAMTHQS 1180
Query: 633 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVK 692
M R Y+ LEF+GDA+LD++I +Y P L+P + +++A VN D A S+
Sbjct: 1181 CMFDYQRRSYEHLEFIGDAILDFIIVRKMYTAEPLLAPHQMHSLKTAMVNADFLAFLSLD 1240
Query: 693 H-----------------------GLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
H L + H+S+ + T+ +E L E
Sbjct: 1241 HQMRRTETAVTSDLQIVDKETTPLALWTFMRHSSEAIGIEQATTLKRYEALRGEILATLR 1300
Query: 730 SETSFPKAL----------GDIIESLSGAIFVDSG 754
+ +P AL DI ESL GA++VDSG
Sbjct: 1301 QGSHYPWALLAGLQAKKFYSDIFESLLGAVWVDSG 1335
>gi|444841767|gb|AGE12616.1| Dicer 2 [Laodelphax striatella]
Length = 1654
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 188/397 (47%), Gaps = 74/397 (18%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
++ + + VL+ +T + F+LE LETLGDSFLKY+ S LF + EG L++ K
Sbjct: 1167 DLGVELADVLQVLTAASAHDIFNLERLETLGDSFLKYSVSLILFTRFPELSEGQLTMIKG 1226
Query: 489 RIISNAALCKLGCDHKLPGFIRTEPFDPKM-WMIPG------------------------ 523
+II N L G + +L I+T F+ + W+ PG
Sbjct: 1227 KIIGNRNLFYCGEEKELGSIIKTVEFNTESDWVAPGFCVDRTVQRLLRELSVNPRYLYEI 1286
Query: 524 ------DNSG----------------SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEA 561
+SG S+E D N + ++ V +KTV+D VEA
Sbjct: 1287 ELTKEERDSGQLSESTRDMIENKLYDSWE-EDTDYANYSNAHFISQQVVSNKTVSDSVEA 1345
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVP---YERQFQVQAERLV--------NVRHL 610
L+G + + G G L + + + P E++ + ++ +L
Sbjct: 1346 LLGLCIKSFGIEKGFEILRWLKVTDPNLIKPDAYVEKKVEPTILSMIGDINFHIHQPDYL 1405
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E L+NY F+ + L++AL+H +Y I YQRLEFLGDA+LD+LIT +++ L+P
Sbjct: 1406 ERLINYKFKQRAFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLITTHIFEHCDNLTP 1465
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL---------- 720
G+LTD+RSA VNN A +V+ GLHK +L S +L K I V+ E
Sbjct: 1466 GELTDLRSALVNNVTLASIAVRIGLHKFLLLRSFQLSKVIESFVERQESRQHEFTDQTLY 1525
Query: 721 ---SLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
++S G E PK LGD+ ESL GAIF+DS
Sbjct: 1526 LINEIDSNVGECIEV--PKILGDVFESLVGAIFLDSN 1560
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 183/470 (38%), Gaps = 91/470 (19%)
Query: 40 DINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQTACLEACKKLHQIGALTDNLLP-- 94
D +++ I L LPN+ P++ +I A +I+ K++A L+ACK L++ L +N+LP
Sbjct: 616 DCHEQKIIVYLQLPNSSPVRQIIKSDAFPSIELAKRSAALKACKLLYESQELDNNMLPCG 675
Query: 95 ------------------DVVVEEHDAQKH---------GNEPYDAEHPIYFPPELVNQC 127
+ V+E D G + + +P FP +
Sbjct: 676 KRSQQLQNKNLYPCWRDDEPPVDEADGDATSQFKKLSPVGTKKCKSIYPKKFPACIYECR 735
Query: 128 PQDTKITYHCYLIELKQNFN----------YDIPAHDIVLAVRTELESEIKKVNFDLEVD 177
P+ K Y ++I++K + YDI D A + + + F L +
Sbjct: 736 PEPGKKVY-MHIIKMKPVYEEPKGPRKKAFYDILNSDFGYAFLSTKQWPTL-LKFPLFLT 793
Query: 178 RGRLTVNLKHLGKIQL-TPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRD--NLE 234
G + + +K + QL T ++ FQ +F ++ + + RD N E
Sbjct: 794 IGEIQIEVKMNEECQLLTQKEIDEIFNFQCVIFSDVL--------QCINTFMSRDYENEE 845
Query: 235 IDYLLLP----ASEQSIDWEPVAS-LSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCM 289
YLL P A I+W + + FP K + +V T+ M
Sbjct: 846 HSYLLAPIKLDAGRPVINWGVIRNNQEFP------EIKPTTAEERENIVVTEE------M 893
Query: 290 IYNSVVCTPHSG----QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYG--IQLCF 343
+SVV + G Q Y +T + A S F G TY+ ++ +Y QL
Sbjct: 894 YKHSVVIPWYRGFLPRQAYIVTDLSKTETALSDFP--SGEYPTYENYFVTKYANVEQLYS 951
Query: 344 DQELLLNGRRIFHAQNYLSKCRQEKQREPSKISF-------ELPPELCRIIMGPMSLSTF 396
+ LL R + N L + RQ Q + L PELC I + + +
Sbjct: 952 AHKPLLEVRALSKKLNCL-RPRQIVQATSKRKKKQEEEFEESLVPELC--IRSNVPAAYW 1008
Query: 397 YSFTFVPSIMHRLQSLLLAVNLK-NMLLDHCMQNVTIPTSKVLEAITTKK 445
T +PS +HR+ LLLA L+ + D + V +P K +T +
Sbjct: 1009 LKSTLLPSCVHRITYLLLADELRVKIATDLNLGTVLLPQGKSWRPMTVDQ 1058
>gi|225561826|gb|EEH10106.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1502
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 230/516 (44%), Gaps = 55/516 (10%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R +Q + ++ + PE RI + P+I+ R++S L+++ + L
Sbjct: 984 RATEQERGEETAYYICPEPLRI--SALPPPVAAFAFAFPAIISRIESYLISLEACDKL-- 1039
Query: 425 HCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQ 470
++I T LEA+T + +E G + E LE LGD FLK A S
Sbjct: 1040 ----QLSIETHLALEALTKDSDNTEEHRKEQIHFQRGMGKNYERLEFLGDCFLKMATSIS 1095
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYE 530
LF ++ E VK+ +I N L KL F+RT+ F + W G +
Sbjct: 1096 LFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVRTQGFSRRNWYPEGIKLLQGK 1155
Query: 531 LNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------IFLDRI 582
S N ++ + KT+AD+ EALIGA L +GG+ +F+D
Sbjct: 1156 AKSESAQN--------KQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSD 1207
Query: 583 GIKV-------DFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-- 633
+V D ++P + Q A +L + + + L Y F P LL A TH SY
Sbjct: 1208 NHRVSDWNSYIDLYSLPSYQIAQADAGQLDLAKQIGNRLGYYFTYPRLLRSAFTHASYPS 1267
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
+P CYQRLEFLGD++LD + +LY+ YP P LT+ + A V+N +VK
Sbjct: 1268 AWSTVP-CYQRLEFLGDSLLDMVCVEHLYHHYPDRDPQWLTEHKMAMVSNKFLGAVAVKL 1326
Query: 694 GLHKHILHASQELYKWINITVDSFERL---SLESTFGWESETSFPKALGDIIESLSGAIF 750
GLHKH+L+ S L+ I + E S +S W + + PK L D++E+ GAIF
Sbjct: 1327 GLHKHLLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCLPDMLEAYIGAIF 1386
Query: 751 VDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAV 810
VDS + EVV + + L+ E M + A N++ M + PRI V
Sbjct: 1387 VDSNFSFEVVEDFFQRYLKQYF--EDMSIYDAFA-NKHPTAGEVQMVDSTEPRIYAAVIV 1443
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ A G +A K + +A E L S K
Sbjct: 1444 HDKFVAQGIASSVRYAKT-KASEAALAKLEGLASFK 1478
>gi|213408108|ref|XP_002174825.1| dicer [Schizosaccharomyces japonicus yFS275]
gi|212002872|gb|EEB08532.1| dicer [Schizosaccharomyces japonicus yFS275]
Length = 1384
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 202/410 (49%), Gaps = 39/410 (9%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAI 441
E+ ++++ P S +PS+++ + + L L+ L I T +LEA
Sbjct: 886 EVTKLLIMPFPYEIRNSALLLPSLLYMFEQVHLVDALRVRL------QAKISTKSLLEAS 939
Query: 442 TTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGC 501
T+ F + E GD+FLK AAS +F +Y E L +++ RII N+ L +
Sbjct: 940 TSPGSVLPFDYDRYEFYGDTFLKLAASNSVFLSYLWVPECKLHIERKRIIRNSTLFTISK 999
Query: 502 DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEA 561
H LPGF+ +EPF K ++ G Y+ S K + + + +KTVAD+VE+
Sbjct: 1000 KHDLPGFLLSEPFVIKTFIPFG-----YQPTQKS-----KNKMERSQLLANKTVADIVES 1049
Query: 562 LIGAFLSTGGENVGLIFLDRIGI------KVDFVNVPYERQFQVQAERLVNVRH---LES 612
+GA L G + L R+G+ K D N + + V + +H LES
Sbjct: 1050 SLGACLYDSGVDEALALGTRLGLNFYKTTKWDEWNSVFNVENLVPSAENDCFKHASGLES 1109
Query: 613 LLNYSFRDPSLLVEALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
L+ Y+F+ P LL A TH SY+ + YQ+LEFLGDAVLD+++ YL+ KY +
Sbjct: 1110 LVGYTFKHPGLLKIAFTHASYVKTTQTAVNYQQLEFLGDAVLDFIVVRYLFKKYQNKTAA 1169
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL---YKWINITVDSFER-LSLESTFG 727
+LTD +S V N A S K GL+ +L ++++ YK +D ++ ++S
Sbjct: 1170 ELTDTKSFYVCNKSLAYVSFKLGLYDFMLQDNEDIRNAYKEYKSVIDKLQQDTKIDSNHP 1229
Query: 728 WESETSF-----PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
SE + PK L DI ES A+++DSG F ++ P L+ ++
Sbjct: 1230 TPSEKFWLLIEPPKFLSDIFESFVCAVYLDSGFQ----FSALEPFLKFLV 1275
>gi|392568586|gb|EIW61760.1| ribonuclease III [Trametes versicolor FP-101664 SS1]
Length = 1232
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 220/513 (42%), Gaps = 68/513 (13%)
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
STF + +PS+M ++ S LL L L H +I ++L A++T+ F+ E
Sbjct: 681 STFRTLWLLPSVMTKVDSCLLVKELDAKLFHH-----SISEQQLLIALSTRAAWTEFNYE 735
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGD+FLK AS L+ T EG L + II N L + + F++ +
Sbjct: 736 RLEFLGDAFLKVIASNFLYVTMPTAGEGTLHNVRQSIIGNKVLHECAMRVGICPFVQHKR 795
Query: 514 FDPKMWM---IPGDNSGS------------------YELNDHSLFNERKIYVTGRKKVKS 552
F K+W IP + + N ER++ R +
Sbjct: 796 FVAKLWQPPHIPAPTATEPNEDVEMADGEGTGDGGEGKGNRKKSKKERQLSAQNRLWMGD 855
Query: 553 KTVADVVEALIGAFLSTGGENVGL-------IFLDRIGIKVDFVNVPYERQFQVQAERLV 605
K VADVVEA++ A +GG L I L I DF + ++ Q
Sbjct: 856 KVVADVVEAILAAAFLSGGHEGALQAARRLQIPLPNIAQWTDFTRIGAQQGEQDAGAGAA 915
Query: 606 -------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
V +++++ F P LL +ALTHGS Y+RLEF+GDA+LD+L+
Sbjct: 916 GAFVLDDTVEAVQAIVGSVFSKPELLAQALTHGSAFGSSEGASYERLEFIGDAILDFLVA 975
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE 718
+++ ++P LSPG LT ++ V+N A V GLH+H+ AS +L I V S
Sbjct: 976 RHIFQRHPHLSPGGLTLLKGGMVSNRALAAFCVTTGLHRHLHFASDQLADSIQRYVTSLT 1035
Query: 719 RL------------SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV---FES 763
L L + + PK L D++ES+ GA++V G + V F++
Sbjct: 1036 ELREKEYEAVAREQRLPGQYWLDLPLEPPKCLSDLVESILGALYVCDGFFEVGVGRFFDA 1095
Query: 764 I-RPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVA-PRINGKAAVTVE-------V 814
+ +P ++ + +T+ P L E Q V P+ A V +E V
Sbjct: 1096 VFKPFMDAHVRLQTLSTNPKVTLLELLQAEGCRQHAVVKLPQDRQNALVHMEGEYRSCVV 1155
Query: 815 HANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
H +G + A A TA K L +L A
Sbjct: 1156 HVHGQVI----ASATDPTAAIATRKVSLAALDA 1184
>gi|195037032|ref|XP_001989969.1| GH18503 [Drosophila grimshawi]
gi|193894165|gb|EDV93031.1| GH18503 [Drosophila grimshawi]
Length = 2254
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 176/383 (45%), Gaps = 67/383 (17%)
Query: 520 MIPGDN-SGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 578
M P N S E ND S F + + + K++AD VEALIGA+L G L+F
Sbjct: 1874 MTPNANLDDSNETNDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLF 1931
Query: 579 LDRIGIKV-------------------------DFVNV------PYERQFQVQAERLVNV 607
+ +G++V + V + P V +
Sbjct: 1932 MAWLGVRVLPYKLVPTAADDERRAPGTSKPNAKNMVTIYGAWPTPRSPLLHFAPNATVEL 1991
Query: 608 RHL-------ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
HL E+ L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +
Sbjct: 1992 EHLLSGFEEFEASLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRH 2051
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
LY SPG LTD+RSA VNN +A +V+HG HK+ H S L N +D F R+
Sbjct: 2052 LYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGL----NDVIDRFVRI 2107
Query: 721 SLESTFGWE--------------SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRP 766
E+ + PKALGD+ ES++GAIF+DS + +VV+
Sbjct: 2108 QQENGHSISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSDLSLDVVWRVYSN 2167
Query: 767 LLEPMIT--PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKH 823
+++P I ++ P REL E + F + +A + VTV+V GT
Sbjct: 2168 MMKPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF--- 2222
Query: 824 THADADKETAKKVASKEVLKSLK 846
+ AK A+K L+ LK
Sbjct: 2223 RGIGRNYRIAKCTAAKCALRQLK 2245
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1722 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYMTYENVHEGKLSHLRSKQVANL 1781
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1782 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1810
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N + L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y
Sbjct: 1706 NFDYQPELVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYMTY 1762
Query: 666 PTLSPGDLTDMRSASVNN 683
+ G L+ +RS V N
Sbjct: 1763 ENVHEGKLSHLRSKQVAN 1780
>gi|388565188|gb|AFK73581.1| dicer-2 [Nilaparvata lugens]
Length = 1656
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 184/384 (47%), Gaps = 67/384 (17%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L+ +T + F+LE LETLGDSFLKYA S LF + EG L++ K ++I N L
Sbjct: 1179 LQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIKGKVIGNRNLF 1238
Query: 498 KLGCDHKLPGFIRTEPFDPKM-WMIPG---DNSGS---YELN------------------ 532
G L I+ F+ + W+ PG D + ELN
Sbjct: 1239 YCGEQKGLGSIIKAVEFNTESDWIAPGFCVDRTVQNLFRELNINPRYLYEIPLSRDEIEC 1298
Query: 533 --------------------DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
D N + ++ +KTV+D VEAL+G ++ + G
Sbjct: 1299 GKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVTSNKTVSDSVEALLGLYIQSYGL 1358
Query: 573 NVG---LIFLDRIGIKVDFVNVPYERQFQVQ-----AERLVNVRH---LESLLNYSFRDP 621
G L +L I K+ +V +++ + + ++ H LE L+NY F+D
Sbjct: 1359 EKGFDMLRWLKVIDPKLITPDVYTKKKVEPTILFKGGQIDFHIHHPDYLEKLINYKFKDR 1418
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
+ L++AL+H +Y I YQRLEFLGDA+LD+L+T ++Y L+PG+LTD+RSA V
Sbjct: 1419 TFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHMYEYCDNLTPGELTDLRSALV 1478
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER----LSLESTFGWE-------S 730
NN A +V+ GLHK +L S +L K I V+ E S ++ F +
Sbjct: 1479 NNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVERQESRNHDFSDDTLFLIDEIDCIIGE 1538
Query: 731 ETSFPKALGDIIESLSGAIFVDSG 754
PK LGD+ ESL GAIF+DS
Sbjct: 1539 SIEVPKILGDVFESLVGAIFLDSN 1562
>gi|326475978|gb|EGD99987.1| hypothetical protein TESG_07315 [Trichophyton tonsurans CBS 112818]
Length = 1435
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 203/423 (47%), Gaps = 68/423 (16%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKV 437
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 931 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSQTILSPVGFQNIQL----V 984
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT +E + + LE LGDS LK AS QL + HEG+LS KKD I+SN+ L
Sbjct: 985 LTAITATSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1044
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
K D L FI T F W P NS + N KI +++ +KT+AD
Sbjct: 1045 KAAVDTGLDQFILTTCFTGAKWR-PLYNSTYAD-------NAGKIGEKSTRELSTKTLAD 1096
Query: 558 VVEALIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYERQFQVQAERLVN 606
VVE+LIGA + GGEN L +FL I I++ F + P F R +
Sbjct: 1097 VVESLIGAAIIDGGENKVLRCLELFLPEINWQPSGERIEILFDSAP---DFNDDCPRDI- 1152
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L++YSF +LL +L+H S ++ + YQRLEFLGD++LD ++T L+
Sbjct: 1153 MSKIEPLIDYSFTKKALLATSLSHPSNLISRM--TYQRLEFLGDSILDNIVTRALFRCKK 1210
Query: 667 TLSPGDLTDMRSASVNNDCYA------------------------LSSVKH--GLHKHIL 700
+ D+ +R+A VN D A ++S H L +++
Sbjct: 1211 EIPHQDMHLIRTALVNADFLAFLCMNTSTDVTREDVCVSPTGEVEVTSSTHQVSLWQYMS 1270
Query: 701 HASQELYKWINITVDSFERLSLE--------STFGWE--SETSFPKALGDIIESLSGAIF 750
H+S ++ + +FE L + +++ W S + PK DIIES+ GAIF
Sbjct: 1271 HSSTDIVETQQAIARTFEELRDQIEKALRSGASYPWTLLSTLNAPKFFSDIIESILGAIF 1330
Query: 751 VDS 753
+DS
Sbjct: 1331 IDS 1333
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD+ L ++ L ++P G L+ + + V+N ++V GL + IL
Sbjct: 999 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1058
Query: 702 ASQELYKW---INIT-VDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
KW N T D+ ++ +ST ++T L D++ESL GA +D G NK
Sbjct: 1059 TCFTGAKWRPLYNSTYADNAGKIGEKSTRELSTKT-----LADVVESLIGAAIIDGGENK 1113
>gi|195150547|ref|XP_002016212.1| GL10619 [Drosophila persimilis]
gi|194110059|gb|EDW32102.1| GL10619 [Drosophila persimilis]
Length = 1720
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 211/489 (43%), Gaps = 114/489 (23%)
Query: 410 QSL-LLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAAS 468
QSL +L V +K++ DH + L AITT + + +E E LGDSFLK +AS
Sbjct: 1177 QSLNVLPVLMKSVSDDHI---TPAHQGEFLAAITTAGSADVYDMERAELLGDSFLKMSAS 1233
Query: 469 QQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WMIPGDN-- 525
L Y + +EG L+ K R++SN L + +P I FDP++ W+ P N
Sbjct: 1234 LYLASRYPDWNEGTLTQVKSRLVSNKNLMYCLRETDIPSRISCSLFDPRLTWLPPSINLP 1293
Query: 526 ----------------SGSYELNDHSLFNERKI--------------------------- 542
G + L D +L +E +
Sbjct: 1294 EDVLDVWTEQPSFAKLIGPHNLFDLALSDEEILAGRCNEDTYRRFVHGCKSNQQGYYAGR 1353
Query: 543 -------YVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYER 595
Y G V++K VAD +EAL+G + G G L+ GI V+ P +
Sbjct: 1354 DFSSGVNYFFGEVTVQNKVVADTLEALLGVIVRNYGLQHGFRMLEYFGICKPEVDKPLSQ 1413
Query: 596 QFQVQAER---------------LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 640
+Q + L+N +LE L Y FRD L++ALTH S+ +
Sbjct: 1414 LLDLQLKSTKMRANASPGDIDGFLINHSYLEQNLGYKFRDRGYLLQALTHPSFPTNRLTG 1473
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
CYQ LEF+GDA+LD+LI+ Y++ L PG+LTD+RSA VNN V+H LH IL
Sbjct: 1474 CYQELEFIGDAILDFLISAYIFENNTKLRPGELTDLRSALVNNTTLGCICVRHKLHLFIL 1533
Query: 701 HA----SQELYKWIN--------------------------ITVDSFERLSLES------ 724
S+ + K++ + +D +++E+
Sbjct: 1534 AENALLSETISKFVKFQESQGHRVTNHVRFLLEERDVQPVILDLDDEVEMAMENDSEDGP 1593
Query: 725 ---TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRL 779
F PKALGD++E+L A+++D + + ++ I L EP + + + +
Sbjct: 1594 PIGAFNLAQNVDVPKALGDVLEALIAAVYMDCR-DLQTTWQMIYHLFEPELKEFSQNIPI 1652
Query: 780 QPARELNEY 788
P R+L+E+
Sbjct: 1653 SPIRQLHEH 1661
>gi|225684422|gb|EEH22706.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1469
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 199/779 (25%), Positives = 323/779 (41%), Gaps = 119/779 (15%)
Query: 47 ICTLYLPNNCPIQTVIAQGNIKTL--KQTACLEACKKLHQIGALTDNL-------LPDVV 97
+C + LP P++ + + + L KQ+A E C L + G L D LP +
Sbjct: 634 VCEVVLPEKSPVRGLTGRPAVAKLSAKQSAAFETCLMLRKNGLLDDYFLSKYHKRLPLMR 693
Query: 98 VEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVL 157
+ + YD + P+L + T H ++ L+ + +VL
Sbjct: 694 NAKLAIKSKKTNQYD----MMVKPKLWEKSRGMTPYEVHATVLTLRPSAKLRRVHQPLVL 749
Query: 158 AVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNL 217
R L + LE D V++ +Q++ ++ L F + +F+ + H +
Sbjct: 750 LTRESL-PKFPVFPLYLETDIECDVVSIPLRASMQVSQSELDLFTTFTLRIFQDLF-HKV 807
Query: 218 DKLNEILKGLWLRD-NLEIDYLLLPAS-EQSIDWEPVASLSFPCDIGLKHHKNCSTMSNA 275
+ WL +LE +L ++ Q IDW+ + + N
Sbjct: 808 YDHQPAMMPYWLAPISLEYGNVLEDSNLRQLIDWKIIQHVQ----------------ENP 851
Query: 276 RVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEE 335
+ T P + + N + G+ Y T L LN L + K+ Y +
Sbjct: 852 EICWTSDMPRSS--LENIFMFDKWDGRYRYFTSEL-ELN---LRPSDPPPPTMAKRRYMD 905
Query: 336 R---YGIQL-----------CFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPP 381
Y I L C + ++ + +N L + + K E ++ + P
Sbjct: 906 NIMNYCISLYKNSRLKFLETCDWNQPVVRAELVRLRRNLLDRTTEHKGEE---TAYYICP 962
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAI 441
E RI P ++ F +FTF P+++ R++S L+A+ N L +TI LEA+
Sbjct: 963 EPLRISALPAPVAVF-AFTF-PAMISRIESYLIALEACNKL------QLTIIPELALEAL 1014
Query: 442 T--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKK 487
T + +E G + E LE LGD FLK + S LF + E VK+
Sbjct: 1015 TKDSDNTEEHRAEQIHFQRGMGKNYERLEFLGDCFLKMSTSISLFAMNADDDEFDFHVKR 1074
Query: 488 DRIISNAALCKLGCDHKLPGFIRTEPFDPKMW------MIPGDNSGSYELNDHSLFNERK 541
+I N L + F+RT+ F + W ++ G N HSL +
Sbjct: 1075 MCLICNQNLFNTAMSLGIYEFVRTQGFSRRNWYPEGIKLLQGKAKSETAENKHSLAD--- 1131
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGE---------------NVGLIFLDRIGIKV 586
K++AD+ EALIGA L +GG N G + V
Sbjct: 1132 -----------KSIADICEALIGASLLSGGRVHRFDTAVKAVTAFVNSGNHQVSDWQSYV 1180
Query: 587 DFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQR 644
++P + + +L + + L Y F+ P LL A TH SY ++P CYQR
Sbjct: 1181 GLYSLPRYQIAEADDTQLDLAQQIGDRLGYRFKYPRLLSSAFTHASYPTGWSKVP-CYQR 1239
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQ 704
LEFLGD++LD + +LY+KYP P LT+ + A V+N +VK GLH+H+L+ S+
Sbjct: 1240 LEFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLLYFSK 1299
Query: 705 ELYKWIN---ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
L I +++ E S++S W + + PK L D++E+ GAIFVDS + EVV
Sbjct: 1300 ALLGQITRYAEEIEATETESIDSPDFWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVV 1358
>gi|429137921|gb|AFZ74931.1| dicer 2 [Aphis glycines]
Length = 1628
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 202/439 (46%), Gaps = 91/439 (20%)
Query: 428 QNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKK 487
+N+ S +L+AIT + F+ E +ET GDSFLK+A S LF + + +EG+L+ K
Sbjct: 1126 KNIGPRQSDILKAITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPSDNEGVLTELK 1185
Query: 488 DRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WM-------------------------- 520
+I+ N L +G + L ++ FDP M W+
Sbjct: 1186 MKIVGNRNLFYVGRNLNLGSYLTVNVFDPNMDWIPPCFGVPQTLKEIIEKGDLQSDVLHQ 1245
Query: 521 --IPGDNS------------------GSYELNDHSLFN---ERKIYVTG---------RK 548
IP DN EL+D ++ + E I G ++
Sbjct: 1246 INIPKDNQIIGILSDNTWKEIEKEIIKFKELSDITMSDSDGEEDIPRVGHSQSDLFIYKQ 1305
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PYERQFQ--VQA 601
V K VAD VE+LIG ++ G VG L +GI F++ P E + +
Sbjct: 1306 SVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDAFKPKPIENIYNDLSFS 1365
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA+LD+LIT Y+
Sbjct: 1366 KVLPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-YTECYQRLEFLGDAILDFLITTYI 1424
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+PG++TD+RS+ VNN +A S + GLH+ IL S ++ + I+ + ++ +
Sbjct: 1425 IQHCYQKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNN 1484
Query: 722 ----------LESTFGWESET-SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
+E + + +E+ PK LGD+ ESL AI++D G + V+ LE
Sbjct: 1485 HKIGQEILYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLDCGRDLNFVWTFCYRFLE- 1543
Query: 771 MITPETMRLQPARELNEYC 789
E+NE+C
Sbjct: 1544 ------------NEINEFC 1550
>gi|328772805|gb|EGF82843.1| hypothetical protein BATDEDRAFT_23044 [Batrachochytrium dendrobatidis
JAM81]
Length = 1492
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 180/653 (27%), Positives = 281/653 (43%), Gaps = 97/653 (14%)
Query: 163 LESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDK-LN 221
+++E +NFD E R R+ V L H K+ LT D + + LF ++ K L+
Sbjct: 793 VQTEHMDLNFDGEPRRFRV-VALAH--KLLLTSDMIAQFFEYHFYLFSGVLRSQFKKGLD 849
Query: 222 EILKGLWLR----DNLEIDY-LLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNAR 276
L + +R DN ID +LP E IDW+ + + C T+
Sbjct: 850 WSLLCVPIRSEYADNTAIDISTILP--ESIIDWDSL--------------RYCQTVDQTD 893
Query: 277 VVQTKSGPLCTCMIYNSVVC--TPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYE 334
+ + P + +Y+ ++ H + Y I + +SL + + + T K Y+
Sbjct: 894 LSSITNDPTISRSVYHDMIVFDRVHYSRKYSILEIQHDKTPSSLVSDLNTFS-TVKSFYK 952
Query: 335 ERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLS 394
R + E ++ + + +A + +K+ S ++ LP + C I P+
Sbjct: 953 TRLRCR-----EPIVEDQCLIYATKVPDPVQIKKKCIASVKTYVLP-QFCTIY--PVKRL 1004
Query: 395 TFYSFTFVPSIMHRLQSLLLA--------VNLKNMLLDHCMQNVTIPTSKVLEAITTKKC 446
Y ++P ++ +L LLA ++L N + DH Q I + +
Sbjct: 1005 HLYQGLYMPLVIRQLWHRLLATDLYFGKEISLLNRMADHTPQ-FFINIETLQTVLVASST 1063
Query: 447 QEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLP 506
+ E LE LGDSFLK S LF + EG L+ + N LC+ + L
Sbjct: 1064 DLPYSYERLEILGDSFLKIHQSLHLFALNPSQDEGWLTTSRMVAEQNLELCRRATEVGLQ 1123
Query: 507 GFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAF 566
G I T F K W+ P S + + K +ADV EA+IG
Sbjct: 1124 GLILTTRFSRKQWVPPAKGHDSMQ------------------SMPKKILADVTEAIIGGC 1165
Query: 567 LSTGGENVGLIFLDRIGIKVDFVNVP--YERQFQVQ--------------AERLVNVRHL 610
L GG VG R + D+ + Y Q+Q+ + LV +R +
Sbjct: 1166 LIDGG-IVGASEAVRSLLNRDYQSEWGLYFTQYQLHRNVTPSHLVRFIGDIDSLVTLR-I 1223
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E++LNY+F+D S+L EALTH S YQRLEFLGDAVL ++IT YLY + + SP
Sbjct: 1224 EAVLNYTFQDKSILWEALTHSSSSFSICGLNYQRLEFLGDAVLSFIITKYLYTQLGSSSP 1283
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE------- 723
G ++ ++S V N A S++ GL L + WI VD++ + +E
Sbjct: 1284 GVISHLKSEMVCNQFLACVSIRLGLIDW-LRVKKSDTVWI---VDAYAQQVIEHLSQPAD 1339
Query: 724 --STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
W T+ PK GD+ E++ GAIFVDS + E V E + L +I P
Sbjct: 1340 SIQKIFWAHMTTAPKICGDVYEAILGAIFVDSKFSIEKVDEFV---LNSLIKP 1389
>gi|391345092|ref|XP_003746827.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1446
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 180/370 (48%), Gaps = 38/370 (10%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ +L A+T Q+ + E E LGDSFLK A + LF EG L+ ++ R+ISN
Sbjct: 1007 ADILTALTPSSAQDVVNSERFEVLGDSFLKIAVTLHLFPREDLPDEGTLTAERCRLISNM 1066
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
L KL K+ + + F + + +PG S E N L ++Y KSK
Sbjct: 1067 NLLKLAVPKKIHEAVESRIFSARESFRVPG--MISREGNKLQL----QVY-------KSK 1113
Query: 554 TVADVVEALIGAFLSTGGENVGL----------------IFLDRIGIKVDFVNVPYERQF 597
AD VEA+IG +L G L FL R + D V
Sbjct: 1114 ICADSVEAMIGVYLERSGPIGALEFLRYLGLSLSDSDSGSFLSRFDLSYDPVVGGNHDYI 1173
Query: 598 QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 657
++ V R +ES+L Y F++ L+EA+TH SY + Y+RLEFLGDAV+DYL+
Sbjct: 1174 SIRRHNDVMSR-VESILGYRFKNRLYLLEAITHQSYN-NRVTHSYERLEFLGDAVIDYLV 1231
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
+ +++ P L PG LT +RSA V N+ +A K GL + +LH S L++ + ++
Sbjct: 1232 SCFIFTNDPHLGPGQLTSVRSALVCNNQFAQIVTKAGLSRCLLHRSPLLFRMMTSYTEAV 1291
Query: 718 ERLSLESTFGWESET------SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
E +F + ET PK GD++ESL GA+F+DS + ++ R L+
Sbjct: 1292 EIGRPCDSFIGDDETEDADLVDAPKPFGDLMESLIGAVFIDSNQDFSRTWDVFRGLMGDR 1351
Query: 772 ITPETMRLQP 781
+ ET++ P
Sbjct: 1352 VLLETLKDNP 1361
>gi|20385913|gb|AAM21495.1|AF430845_1 dicer-like protein [Mus musculus]
Length = 1917
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1551 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1610
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1611 QKSLSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1670
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1671 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1730
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1731 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1786
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1787 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1846
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1847 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1900
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1901 RRALRSLKANQP 1912
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1284 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1336
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1337 PDAHEGRLSYMRSKKVSN 1354
>gi|148686841|gb|EDL18788.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Mus musculus]
Length = 1908
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1542 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1601
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1602 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1661
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1662 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1721
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1722 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1777
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1778 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1837
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1838 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1891
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1892 RRALRSLKANQP 1903
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1289 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1348
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1349 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1376
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1275 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1327
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1328 PDAHEGRLSYMRSKKVSN 1345
>gi|117168271|ref|NP_683750.2| endoribonuclease Dicer [Mus musculus]
gi|225000568|gb|AAI72621.1| Dicer1, Dcr-1 homolog (Drosophila) [synthetic construct]
Length = 1906
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1599
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1600 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1659
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1660 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1719
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1720 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1775
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1776 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1835
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1836 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1889
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1890 RRALRSLKANQP 1901
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1374
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1273 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1325
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1326 PDAHEGRLSYMRSKKVSN 1343
>gi|257051057|sp|Q8R418.3|DICER_MOUSE RecName: Full=Endoribonuclease Dicer; AltName:
Full=Double-strand-specific ribonuclease mDCR-1
Length = 1916
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1609
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1610 QKSLSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1669
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1670 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1729
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--GWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1730 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1785
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1786 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1845
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1846 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1899
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1900 RRALRSLKANQP 1911
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|19072784|gb|AAL84637.1|AF484523_1 endoribonuclease Dicer [Mus musculus]
Length = 361
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 142/259 (54%), Gaps = 28/259 (10%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY S
Sbjct: 108 FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 167
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FG 727
PG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G
Sbjct: 168 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQG 223
Query: 728 WESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
+SE PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I
Sbjct: 224 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEK 283
Query: 775 ETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKE 831
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 284 FSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYR 337
Query: 832 TAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 338 IAKSAAARRALRSLKANQP 356
>gi|148686840|gb|EDL18787.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Mus musculus]
Length = 1916
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1609
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1610 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1669
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1670 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1729
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--GWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1730 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1785
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1786 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1845
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1846 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1899
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1900 RRALRSLKANQP 1911
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|226294068|gb|EEH49488.1| Dicer [Paracoccidioides brasiliensis Pb18]
Length = 1423
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 208/445 (46%), Gaps = 70/445 (15%)
Query: 358 QNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVN 417
+N L + + K E S+ + PE RI P ++ F +FTF P+++ R++S L+A+
Sbjct: 881 RNLLDRTTEHKGEE---TSYYICPEPLRISALPAPVAVF-AFTF-PAMISRIESYLIALE 935
Query: 418 LKNMLLDHCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFL 463
N L +TI LEA+T + +E G + E LE LGD FL
Sbjct: 936 ACNKL------QLTIIPELALEALTKDSDNTEEHRAEQIHFQRGMGKNYERLEFLGDCFL 989
Query: 464 KYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW---- 519
K + S LF + E VK+ +I N L + F+RT+ F + W
Sbjct: 990 KMSTSISLFAMNADDDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRTQGFSRRNWYPEG 1049
Query: 520 --MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI 577
++ G N HSL + K++AD+ EALIGA L +GG
Sbjct: 1050 IKLLQGKAKSETAENKHSLAD--------------KSIADICEALIGASLLSGGRVHR-- 1093
Query: 578 FLDRIGIKVDFVN-----------------VPYERQFQVQAERLVNVRHLESLLNYSFRD 620
F + FVN +P + + +L + + L Y F+
Sbjct: 1094 FDTAVKAVTAFVNSENHQVSDWQSYVGLYSLPRYQIAEADDTQLDLAQQIGDRLGYRFKY 1153
Query: 621 PSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
P LL A TH SY ++P CYQRLEFLGD++LD + +LY+KYP P LT+ +
Sbjct: 1154 PRLLSSAFTHASYPTGWSKVP-CYQRLEFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKM 1212
Query: 679 ASVNNDCYALSSVKHGLHKHILHASQELYKWIN---ITVDSFERLSLESTFGWESETSFP 735
A V+N +VK GLH+H+L+ S+ L I +++ E S++S W + + P
Sbjct: 1213 AMVSNKFLGAVAVKLGLHRHLLYFSKALLGQITRYAEEIEATETESIDSPDFWTTTSDPP 1272
Query: 736 KALGDIIESLSGAIFVDSGCNKEVV 760
K L D++E+ GAIFVDS + EVV
Sbjct: 1273 KCLPDMLEAYIGAIFVDSNFSFEVV 1297
>gi|22830885|dbj|BAC15765.1| double-strand-specific ribonuclease MDCR [Mus musculus]
Length = 1906
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 177/372 (47%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1599
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1600 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1659
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1660 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1719
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--GWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1720 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1775
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1776 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1835
Query: 780 QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + FS + +GK VTVEV G K AK A+
Sbjct: 1836 SPVRELLEMEPETAEFSPAERT---YDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1889
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1890 RRALRSLKANQP 1901
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1374
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1273 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1325
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1326 PDAHEGRLSYMRSKKVSN 1343
>gi|392567716|gb|EIW60891.1| hypothetical protein TRAVEDRAFT_146565 [Trametes versicolor FP-101664
SS1]
Length = 1459
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 207/417 (49%), Gaps = 41/417 (9%)
Query: 369 QREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL------LAVNLKNML 422
+++P+ + F P E+CR + P + + +F +P + HR+ + +A+ L +
Sbjct: 892 RQKPATVIF--PLEICRWALMPEHI--YRTFFVLPELCHRVTDVWRAHEARIALKLPPIA 947
Query: 423 LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
D +Q +T+P++ F+ + LETLGD+ LK +A L+ Y + HEG
Sbjct: 948 DDLLVQALTLPSTNA-----------QFNNQRLETLGDAVLKLSAVVHLYNKYPHRHEGQ 996
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL-NDHSLFNERK 541
L K ++N L G + L + +EP +MW Y + ++ LF+ R
Sbjct: 997 LDAMKRVSVANRTLLARGVERSLERHLSSEPQSMRMW--------RYVISSEDDLFSARP 1048
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQV-- 599
R + K++ D +EAL+GA +TGG ++ L +G+ P+ ++ +
Sbjct: 1049 SRQAPR-RFPRKSMQDCMEALLGASFATGGIDMALHAGTVLGVSFGG-PTPWNIRYGLLM 1106
Query: 600 -QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
++E L+ L Y F LL+EA+TH S+ + YQRLEFLGDA++D ++T
Sbjct: 1107 PKSEPSPLFLTLQEALGYRFEHGQLLLEAVTHPSFGSAD-SSSYQRLEFLGDALIDMVVT 1165
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSF 717
YLY K+P + G L+ RS +V A L+ + GLHK +L + EL I V
Sbjct: 1166 EYLYKKFPEATSGQLSWARSRAVCGTALASLAVNRLGLHKLLLINNVELSIAIGRYVPIL 1225
Query: 718 ERLSLESTF--GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
E ++ E GW+ + PKAL D+ ES+ GA+FVD N + I ++E +I
Sbjct: 1226 EEITNEEIILDGWKHDP--PKALSDVFESVMGALFVDCDYNYDKAAAVIEMVMEDLI 1280
>gi|121714731|ref|XP_001274976.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
gi|158706439|sp|A1C9M6.1|DCL2_ASPCL RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119403130|gb|EAW13550.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
Length = 1389
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 203/448 (45%), Gaps = 62/448 (13%)
Query: 352 RRIFHAQNYLSK---CRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
R + H Q +K +E EP + + C I P S + F+ ++ +
Sbjct: 856 RNLLHRQTLATKKLENDKEDTPEPVNKMRTVAADQCTIDRLPFSNAILG--LFISVVVQQ 913
Query: 409 LQSLLLAVNLKNMLLDHCMQNVTIPTSK-VLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
L++ L+A L +L ++V +++ ++ AI+ Q + + E LGDS LK++
Sbjct: 914 LETELIATKLYETIL----RDVGFTSTQHIITAISAPSAQALTNYQRYEFLGDSILKFSV 969
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
S QLF + N HEG LS +D I+ N L K D L F+ T+ F P+ W P
Sbjct: 970 SCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKWSAP----- 1024
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
L +ER V G+++V SK +ADVVEALIGA GG + R +++
Sbjct: 1025 --------LISERLERVAGKRQVSSKVLADVVEALIGAAYMDGGHAAAQACIRRFLPEIN 1076
Query: 588 FVNV---PYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
++ R + R L+ ++Y+F + SLLVEALTH S + YQR
Sbjct: 1077 LHSLDTRTLSRSVAPEGARQTIHDRLKRHISYTFENESLLVEALTHPSCDYDASTQSYQR 1136
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQ 704
LEFLGDAVLD +I ++N + G +T ++ A VN + A ++ + + Q
Sbjct: 1137 LEFLGDAVLDMIIVSAIFNHPVQMPQGHMTKIKHALVNANLLAFLCMEFAIPEERASVEQ 1196
Query: 705 ---------------ELYKWI--------NITVDSFER-----------LSLESTFGWE- 729
EL++++ N S R L + + W+
Sbjct: 1197 ISTLQFEVISNEELVELWRFMRYRGLDLNNARDASLARHRALRDEILHSLQHDPHYPWQA 1256
Query: 730 -SETSFPKALGDIIESLSGAIFVDSGCN 756
S S K DI+ES+ GAIFVDSG +
Sbjct: 1257 LSRLSADKFFSDIMESILGAIFVDSGGD 1284
>gi|63054443|ref|NP_588215.2| dicer [Schizosaccharomyces pombe 972h-]
gi|1351642|sp|Q09884.1|DCR1_SCHPO RecName: Full=Protein Dicer; AltName: Full=Cell cycle control protein
dcr1; AltName: Full=RNA interference pathway protein
dcr1; Includes: RecName: Full=Endoribonuclease dcr1;
Includes: RecName: Full=ATP-dependent helicase dcr1
gi|157310516|emb|CAB41233.2| dicer [Schizosaccharomyces pombe]
Length = 1374
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 190/378 (50%), Gaps = 30/378 (7%)
Query: 390 PMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEG 449
P+S S +PSI++ +++LL+A + ++H + I T+ +A+T+ + Q
Sbjct: 873 PVSRHLKNSALLIPSILYHIENLLVA----SSFIEHFRLDCKIDTA--CQALTSAESQLN 926
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F + LE GD FLK AS +F + + E L + +IISN L K+ D +LP +
Sbjct: 927 FDYDRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCELPKYA 986
Query: 510 RTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLST 569
+ P + + W G + + +++ +K+ K +AD+VEA IGA L
Sbjct: 987 LSTPLEIRHWCPYGFQKSTSDKCRYAVL----------QKLSVKRIADMVEASIGACLLD 1036
Query: 570 GGENVGLIFLDRIGIKV-DFVNV-PYERQFQVQ--AERLVNVR-----HLESLLNYSFRD 620
G + L + + + D N + F + A+ L NV+ ++E + YSF++
Sbjct: 1037 SGLDSALKICKSLSVGLLDISNWDEWNNYFDLNTYADSLRNVQFPYSSYIEETIGYSFKN 1096
Query: 621 PSLLVEALTHGSYMLPE-IPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSA 679
LL A H S M + I YQ+LEFLGDAVLDY+I YLY KYP + G+LTD +S
Sbjct: 1097 KKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNATSGELTDYKSF 1156
Query: 680 SVNNDCYALSSVKHGLHKHILHASQELYKWI---NITVDSFERLSLESTFGWESETSFPK 736
V N + LHK+I H S + I +++F + E+ + W E PK
Sbjct: 1157 YVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASENPWFW-FEIDSPK 1215
Query: 737 ALGDIIESLSGAIFVDSG 754
+ D +E++ AIF+DSG
Sbjct: 1216 FISDTLEAMICAIFLDSG 1233
>gi|37360146|dbj|BAC98051.1| mKIAA0928 protein [Mus musculus]
Length = 1475
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1109 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1168
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1169 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1228
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1229 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1288
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1289 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1344
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1345 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1404
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1405 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1458
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1459 RRALRSLKANQP 1470
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 856 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 915
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 916 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 943
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 842 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 894
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 895 PDAHEGRLSYMRSKKVSN 912
>gi|74204500|dbj|BAE23515.1| unnamed protein product [Mus musculus]
Length = 514
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 148 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 207
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 208 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 267
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 268 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 327
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--GWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 328 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 383
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 384 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 443
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 444 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 497
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 498 RRALRSLKANQP 509
>gi|198457361|ref|XP_001360634.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
gi|198135949|gb|EAL25209.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
Length = 1720
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 211/489 (43%), Gaps = 114/489 (23%)
Query: 410 QSL-LLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAAS 468
QSL +L V +K++ DH + L AITT + + +E E LGDSFLK +AS
Sbjct: 1177 QSLNVLPVLMKSVSDDHI---TPAHQGEFLAAITTAGSADVYDMERAELLGDSFLKMSAS 1233
Query: 469 QQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WMIPGDN-- 525
L Y + +EG L+ K R++SN L + +P I FDP++ W+ P N
Sbjct: 1234 LYLASRYPDWNEGTLTQVKSRLVSNKNLMYCLRETDIPSRISCSLFDPRLTWLPPSINLP 1293
Query: 526 ----------------SGSYELNDHSLFNERKI--------------------------- 542
G + L D +L +E +
Sbjct: 1294 EDVLDVWTEQPSFAKLIGPHNLFDLALSDEEILAGRCNEDTYRRFVHGCKSNQQGYYAGR 1353
Query: 543 -------YVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYER 595
Y G V++K +AD +EAL+G + G G L+ GI V+ P +
Sbjct: 1354 DFSSGVNYFFGEVTVQNKVMADTLEALLGVIVRNYGLQHGFRMLEYFGICKPDVDKPLSQ 1413
Query: 596 QFQVQAER---------------LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 640
+Q + L+N +LE L Y FRD L++ALTH S+ +
Sbjct: 1414 LLDLQLKSTKMRANASPGDIDGFLINHSYLEQNLGYKFRDRGYLLQALTHPSFPTNRLTG 1473
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
CYQ LEF+GDA+LD+LI+ Y++ L PG+LTD+RSA VNN V+H LH IL
Sbjct: 1474 CYQELEFIGDAILDFLISAYIFENNNKLRPGELTDLRSALVNNTTLGCICVRHKLHLFIL 1533
Query: 701 HA----SQELYKWIN--------------------------ITVDSFERLSLES------ 724
S+ + K++ + +D +++E+
Sbjct: 1534 AENALLSETISKFVKFQESQGHRVTNHVRFLLEERDVQPVILDLDEEVEMAMENDSGDGP 1593
Query: 725 ---TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRL 779
F PKALGD++E+L A+++D + + ++ I L EP + + + +
Sbjct: 1594 PIGAFNLAQNVDVPKALGDVLEALIAAVYMDCR-DLQTTWQMIYHLFEPELKEFSQNIPI 1652
Query: 780 QPARELNEY 788
P R+L+E+
Sbjct: 1653 SPIRQLHEH 1661
>gi|358253873|dbj|GAA53880.1| endoribonuclease Dicer [Clonorchis sinensis]
Length = 2384
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 184/407 (45%), Gaps = 108/407 (26%)
Query: 414 LAVNLKNMLLDHCMQNVTIP-TSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLF 472
L++N + H + V P + VL+A+T + +LE +ET+GDSFLK+ A+ L+
Sbjct: 1718 LSLNNDQHRVTHHSERVYRPGPANVLQALTMSCSNDFINLERMETIGDSFLKFVATVHLY 1777
Query: 473 KTYQNHHEGLLSVKKDRIISNAAL---------------CKLGCDHKL--PGFIRTEPFD 515
TY N HEG LS + R++ N+ L CK G PG++ D
Sbjct: 1778 LTYPNAHEGKLSHMRSRVVCNSNLYRLGRAKHLQDRMIACKFGPYENWVPPGYVVRH--D 1835
Query: 516 PKMWMIPGDNS-------GSYELN----------DHSLFNERKIY--------------- 543
P++ NS + E+N D + K+Y
Sbjct: 1836 PRLVTKADHNSLQSPTRQSNKEVNLNIWSTDTLMDDEVLLGMKVYTEEIKPIDNFAVSQW 1895
Query: 544 ------------------VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI- 584
VT ++ + K++AD VEALIG +L+ GE L + GI
Sbjct: 1896 DPNSPEVVKTQKSVDHCLVTIQQAIPDKSIADCVEALIGCYLTARGERSALRLMRWFGID 1955
Query: 585 -------KVDFVNVPYE-----------RQFQVQAERLV-NVRHLESLLNYSFRDPSLLV 625
++ P+ R+ Q++ RL LE+ LNY FRDP+LL+
Sbjct: 1956 CLPGPDVRLRPRGAPWAIPPPLIPLNDPRRAQLEEARLSWRFDELEAKLNYKFRDPTLLI 2015
Query: 626 EALTHGSY-----MLPEIPR-------------CYQRLEFLGDAVLDYLITVYLYNKYPT 667
+A TH SY LP P CYQRLEFLGDAVLDY+IT +LY
Sbjct: 2016 QAFTHPSYHQLRKTLPVNPDDDPFSSTFLTDTDCYQRLEFLGDAVLDYVITRFLYEDSQQ 2075
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
SPG LTD+RSA VNN+ +A SV+ GLH+ + +S +L I++ V
Sbjct: 2076 HSPGVLTDLRSALVNNNIFAALSVRAGLHQFLRASSPQLLHTIDVFV 2122
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEY 788
+ PKALGDI ESL+GA+F+DS + + V+ PL++ I T + P R+L E
Sbjct: 2252 DVEIPKALGDIFESLAGALFLDSDLSLDTVWTVFYPLMKERIERYTACIPKSPVRQLLEL 2311
Query: 789 -CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ F + A +G+ +V V G + + AK +A+K L+ L+
Sbjct: 2312 EPEGTKFERPRRTA---DGRISVCAHVLGKGRFYG---IGRNYRLAKSLAAKRALRVLR 2364
>gi|195391256|ref|XP_002054279.1| GJ24359 [Drosophila virilis]
gi|194152365|gb|EDW67799.1| GJ24359 [Drosophila virilis]
Length = 2250
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 174/374 (46%), Gaps = 66/374 (17%)
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV- 586
S E ND S F + + + K++AD VEALIGA+L G L+F+ +G++V
Sbjct: 1879 SNETNDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVL 1936
Query: 587 ---------------------DFVNV-------PYER----QFQVQAER-----LVNVRH 609
D N+ P R F A L
Sbjct: 1937 PYKLEPTAAAIEQRMPGSTKPDLNNMITVYGDWPTPRSPLLHFAPNANAELEHLLSGFEE 1996
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
ES L Y+F D S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1997 FESSLGYTFSDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 2056
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--- 726
PG LTD+RSA VNN +A +V+HG HK+ H S L N +D F R+ E+
Sbjct: 2057 PGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGL----NDVIDRFVRIQQENGHIIS 2112
Query: 727 -----------GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT-- 773
+ PKALGD+ ES++GAIF+DS + +VV++ +++P I
Sbjct: 2113 EEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWQVYSNMMKPEIEQF 2172
Query: 774 PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKET 832
++ P REL E + F + +A + VTV+V GT +
Sbjct: 2173 SNSVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRI 2227
Query: 833 AKKVASKEVLKSLK 846
AK A+K L+ LK
Sbjct: 2228 AKCTAAKCALRQLK 2241
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1718 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1777
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1778 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1806
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
E+Q + + + H L+ + PS++++ALT + +RLE +GD+ L
Sbjct: 1690 EKQITGRPDGAFSFDHQPDLVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFL 1746
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
Y IT YLY Y + G L+ +RS V N
Sbjct: 1747 KYAITTYLYITYENVHEGKLSHLRSKQVAN 1776
>gi|195331135|ref|XP_002032258.1| GM23619 [Drosophila sechellia]
gi|194121201|gb|EDW43244.1| GM23619 [Drosophila sechellia]
Length = 2249
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 165/362 (45%), Gaps = 72/362 (19%)
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQV---- 599
+ + + K++AD VEALIGA+L G L+F+ +G++V +P RQ
Sbjct: 1892 LVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDAGNQE 1947
Query: 600 ---------QAERLVNV-----------------------------RHLESLLNYSFRDP 621
AE +V V E L Y FRD
Sbjct: 1948 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 2007
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE------------ 729
NN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECD 2123
Query: 730 --SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPAREL 785
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I ++ P REL
Sbjct: 2124 DAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIREL 2183
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V GT + AK A+K L+
Sbjct: 2184 LELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAKCTAAKCALRQ 2238
Query: 845 LK 846
LK
Sbjct: 2239 LK 2240
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1724 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1783
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1784 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1812
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1715 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1771
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1772 LSHLRSKQVAN 1782
>gi|46117132|ref|XP_384584.1| hypothetical protein FG04408.1 [Gibberella zeae PH-1]
Length = 1451
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 189/397 (47%), Gaps = 61/397 (15%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK-VLEAITTKKCQEGFHLESLETLG 459
+PSI+H L+ L+A L + LL V I + V+EAI+++ E E +E LG
Sbjct: 955 LIPSIIHELEVQLIANELSSTLL----APVGITDLQLVIEAISSRSAAEPVDYERIEFLG 1010
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LKY Q + + EGLL+ KDR++SN L ++ + L FI ++ F W
Sbjct: 1011 DSVLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTRLTRMCLETGLSKFIFSKTFTGIKW 1070
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--- 576
L +++ + R V KT+ADVVEAL+GA GG + L
Sbjct: 1071 R---------PLYRDEFLDKKPVDGVSRF-VGPKTLADVVEALVGASYQDGGISKALECI 1120
Query: 577 -IFLDRIGIKVDFVNVPYERQFQVQAERLVNV------RHLESLLNYSFRDPSLLVEALT 629
+FL G K ++ + R +A + +V LE L+ Y+F+ SLL+EA+T
Sbjct: 1121 KVFL---GTKCNWHDDKVARDILFRAA-ISDVPLPPTMEPLEELIGYTFQKKSLLIEAMT 1176
Query: 630 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
HGSY R Y++LEFLGDAVLDY++ ++ P + G L +++A N D A +
Sbjct: 1177 HGSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAMANADFLAFT 1236
Query: 690 SVKHGLH----------------------KHILHASQELYKWINITVDSFERLSLESTFG 727
+++HGL K + H+S E+ + +N T FE L E
Sbjct: 1237 NMQHGLRRPEVEINENGEPVPTEVSLPIWKFMRHSSPEMGRIMNETQARFESLQEEINEA 1296
Query: 728 WESETSFPKAL----------GDIIESLSGAIFVDSG 754
+ +P L DI E+ GAI+VDSG
Sbjct: 1297 RTNGKHYPWTLLARLHPKKFYSDIFEATLGAIWVDSG 1333
>gi|344274190|ref|XP_003408901.1| PREDICTED: endoribonuclease Dicer [Loxodonta africana]
Length = 1920
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 143/260 (55%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1666 NFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1725
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1726 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1781
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I
Sbjct: 1782 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLELVWQVYYPMMRPLIE 1841
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1842 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1895
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1896 RIAKSAAARRALRSLKANQP 1915
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1293 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1352
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1353 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1380
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1279 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1331
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1332 PDAHEGRLSYMRSKKVSN 1349
>gi|328716581|ref|XP_003245985.1| PREDICTED: endoribonuclease Dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1489
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 170/361 (47%), Gaps = 64/361 (17%)
Query: 406 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKY 465
+H +Q+ + + + L DH + ++ +L+A+T +G +LE LET+GDSFLKY
Sbjct: 1100 VHGVQTGTFSFDFQPDLNDHPGPSPSV----LLQALTMSNANDGINLERLETIGDSFLKY 1155
Query: 466 AASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG------------------------- 500
A + L+ T+ N HEG LS + + +SN L +LG
Sbjct: 1156 AITAYLYCTHDNVHEGKLSHLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCY 1215
Query: 501 -CDHKLPGFIRTEPFDPKMWMI--------PGDNSGSYELNDHSL-FNERKIYVT----- 545
HKL + +W + P D + + F+ I T
Sbjct: 1216 FVPHKLEKALINASIPTTLWNMITLPTFKDPTDKEIEEVIQQFKVGFSNEDIENTPLFVP 1275
Query: 546 ----GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYERQF 597
+ + K++AD VEALIGA+L + G L+F+ +GI+V D + Y +
Sbjct: 1276 YNLVTQHSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPP 1335
Query: 598 QVQAERLVN------------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 645
R V+ E L Y F+D S L++A+TH SY + CYQRL
Sbjct: 1336 SSPLLRNVDDPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMTHASYYPNRLTDCYQRL 1395
Query: 646 EFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE 705
EFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +V++G HK+ H S
Sbjct: 1396 EFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVRNGFHKYFKHLSPG 1455
Query: 706 L 706
L
Sbjct: 1456 L 1456
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 171/444 (38%), Gaps = 84/444 (18%)
Query: 42 NKEMGICTLYLPNNCPIQTVIAQGNIKT---LKQTACLEACKKLHQIGALTDNLLPDVVV 98
N+ M +C++ LP N PI+ I + K+ A LE C++LH G L D L P +
Sbjct: 408 NQPMFVCSIRLPINSPIKHDIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQP-ITK 466
Query: 99 EEHDAQKHGNE----------PYDAEHP---------IYFP--PELVNQC-PQDTKITYH 136
E A + +E P+D E P Y+ E +N C P + K
Sbjct: 467 ESFHALFNADEVLPDAEDALIPWDTEEPRPGTNKRRQYYYKRIAEALNDCRPVENK---P 523
Query: 137 CYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPD 196
C+L + N N +P E + ++++ E G + +KH+ I P
Sbjct: 524 CHLYAILLNMNCPVPE---------EQNTRGRRIHPPEESVHGFGILTIKHIPSIPPFP- 573
Query: 197 KVLLCRRFQIALFRVIMD-----HNLDKLNEILKGLWL------RDNLEID-------YL 238
C ++L + D H LD + L + + ++ D Y
Sbjct: 574 IYTRCGEVYVSLKPIKTDMFLTQHQLDNIATFLNYTFTNVLRLQKCHVAFDPTTTHNCYY 633
Query: 239 LLPASEQS-----IDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNS 293
++P + IDW + ++ D L N M+ + + T N
Sbjct: 634 IVPTLRDASGSIDIDWNFLDNMHKCRDNKLSIITNEDRMNFQPDIDVLKDAVVTPWYRNQ 693
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN--- 350
Q +Y+ + HLN S F + T++ +Y +Y +++ ++ LL+
Sbjct: 694 -----EQPQYFYVAEICTHLNPKSPFPGSIENYKTFEDYYYLKYSLKIQNLEQPLLDVDH 748
Query: 351 --GRRIFHAQNYL----------SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYS 398
R F Y+ S + +R+ L PELC + + P S+ +
Sbjct: 749 TSARLNFLTPRYMNRKGVILPTSSDATKRAKRDNLSQKQILVPELCNVHLFPASM--WRK 806
Query: 399 FTFVPSIMHRLQSLLLAVNLKNML 422
+P I++R+ +LLLA ++ ++
Sbjct: 807 AVSLPCILYRINALLLADEIRTIV 830
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 54/194 (27%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS+L++ALT + +RLE +GD+ L Y IT YLY + + G L+ +RS
Sbjct: 1124 PSVLLQALTMSN---ANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQ 1180
Query: 681 VNN-DCYALSSVK-------------------------HGLHKHILHASQELYKWINITV 714
V+N + Y L +K H L K +++AS W IT+
Sbjct: 1181 VSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNMITL 1240
Query: 715 DSF--------ERLSLESTFGWESET----------------SFP-KALGDIIESLSGAI 749
+F E + + G+ +E S P K++ D +E+L GA
Sbjct: 1241 PTFKDPTDKEIEEVIQQFKVGFSNEDIENTPLFVPYNLVTQHSIPDKSIADCVEALIGAY 1300
Query: 750 FVDSGCNKEVVFES 763
+ G ++F S
Sbjct: 1301 LISCGARGALLFMS 1314
>gi|328696734|ref|XP_003240110.1| PREDICTED: endoribonuclease dcr-1-like isoform 3 [Acyrthosiphon
pisum]
Length = 1630
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 198/421 (47%), Gaps = 80/421 (19%)
Query: 418 LKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQN 477
L ++ ++ QN+ S +L+ IT + F+ E +ET GDSFLK+A S LF + +
Sbjct: 1118 LSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPS 1177
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WM---------------- 520
+EG+L+ K +++ N L +G + L ++ FDP M W+
Sbjct: 1178 DNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEE 1237
Query: 521 ------------IPGDNSGSYELNDHSLFN---------------------ERKIYVTG- 546
IP DN + L+D + E I G
Sbjct: 1238 GNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGH 1297
Query: 547 --------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PY 593
++ V K VAD VE+LIG ++ G VG L +GI F++ P
Sbjct: 1298 SQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDTFKPKPI 1357
Query: 594 ERQFQVQ--AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
+ + ++ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA
Sbjct: 1358 DDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-FSECYQRLEFLGDA 1416
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN 711
+LD+LIT Y+ +PG++TD+RS+ VNN +A S + GLH+ IL S ++ + I+
Sbjct: 1417 ILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAID 1476
Query: 712 ITVDSFERLS----------LESTFGWESET-SFPKALGDIIESLSGAIFVDSGCNKEVV 760
+ ++ + +E + + +E+ PK LGD+ ESL AI++D CN+++
Sbjct: 1477 RFYEHQQKNNHKIGQEVLYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLD--CNRDLN 1534
Query: 761 F 761
F
Sbjct: 1535 F 1535
>gi|328696732|ref|XP_001945890.2| PREDICTED: endoribonuclease dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1691
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 198/421 (47%), Gaps = 80/421 (19%)
Query: 418 LKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQN 477
L ++ ++ QN+ S +L+ IT + F+ E +ET GDSFLK+A S LF + +
Sbjct: 1179 LSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPS 1238
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WM---------------- 520
+EG+L+ K +++ N L +G + L ++ FDP M W+
Sbjct: 1239 DNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEE 1298
Query: 521 ------------IPGDNSGSYELNDHSLFN---------------------ERKIYVTG- 546
IP DN + L+D + E I G
Sbjct: 1299 GNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGH 1358
Query: 547 --------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PY 593
++ V K VAD VE+LIG ++ G VG L +GI F++ P
Sbjct: 1359 SQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDTFKPKPI 1418
Query: 594 ERQFQVQ--AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
+ + ++ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA
Sbjct: 1419 DDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-FSECYQRLEFLGDA 1477
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN 711
+LD+LIT Y+ +PG++TD+RS+ VNN +A S + GLH+ IL S ++ + I+
Sbjct: 1478 ILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAID 1537
Query: 712 ITVDSFERLS----------LESTFGWESET-SFPKALGDIIESLSGAIFVDSGCNKEVV 760
+ ++ + +E + + +E+ PK LGD+ ESL AI++D CN+++
Sbjct: 1538 RFYEHQQKNNHKIGQEVLYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLD--CNRDLN 1595
Query: 761 F 761
F
Sbjct: 1596 F 1596
>gi|328696730|ref|XP_003240109.1| PREDICTED: endoribonuclease dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1648
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 198/421 (47%), Gaps = 80/421 (19%)
Query: 418 LKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQN 477
L ++ ++ QN+ S +L+ IT + F+ E +ET GDSFLK+A S LF + +
Sbjct: 1136 LSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPS 1195
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WM---------------- 520
+EG+L+ K +++ N L +G + L ++ FDP M W+
Sbjct: 1196 DNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEE 1255
Query: 521 ------------IPGDNSGSYELNDHSLFN---------------------ERKIYVTG- 546
IP DN + L+D + E I G
Sbjct: 1256 GNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGH 1315
Query: 547 --------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PY 593
++ V K VAD VE+LIG ++ G VG L +GI F++ P
Sbjct: 1316 SQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDTFKPKPI 1375
Query: 594 ERQFQVQ--AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
+ + ++ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA
Sbjct: 1376 DDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-FSECYQRLEFLGDA 1434
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN 711
+LD+LIT Y+ +PG++TD+RS+ VNN +A S + GLH+ IL S ++ + I+
Sbjct: 1435 ILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAID 1494
Query: 712 ITVDSFERLS----------LESTFGWESET-SFPKALGDIIESLSGAIFVDSGCNKEVV 760
+ ++ + +E + + +E+ PK LGD+ ESL AI++D CN+++
Sbjct: 1495 RFYEHQQKNNHKIGQEVLYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLD--CNRDLN 1552
Query: 761 F 761
F
Sbjct: 1553 F 1553
>gi|425768112|gb|EKV06652.1| Dicer-like protein 2 [Penicillium digitatum Pd1]
gi|425769791|gb|EKV08273.1| Dicer-like protein 2 [Penicillium digitatum PHI26]
Length = 796
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 190/434 (43%), Gaps = 59/434 (13%)
Query: 366 QEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH 425
++ + + K S+ LP C I P F F+ +I+ RL++ L+A L + +L
Sbjct: 283 EDGEADAPKKSYVLPAVACVIDKLPAKQGLFG--LFISAILDRLEASLVAHRLNDTILKG 340
Query: 426 C-MQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
+QN+ V+ AI+ Q + + E GDS LK+ S QLF N HEG LS
Sbjct: 341 VGIQNI----DHVITAISAPIAQASTNYQRFEFFGDSVLKFTVSCQLFFRNTNWHEGYLS 396
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
+D+++ N L D + FI T F P+ W P L +
Sbjct: 397 ESRDKLVQNTRLAHAALDIGIDCFILTSRFTPRKWAAP-------------LIRNKLEAS 443
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV---PYERQFQVQA 601
T ++ + +K +ADVVE+LIGA GG L R ++D P A
Sbjct: 444 TAKRSISTKVLADVVESLIGAAYVDGGIRKAQACLHRFLPEIDLFTTEISPLTLPPSKGA 503
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
L+N L L+ Y+F+DP+LL EALTH S + YQRLEFLGDAVLD ++ +
Sbjct: 504 SSLINHHRLAGLIGYTFKDPALLTEALTHASCEYDTSTQSYQRLEFLGDAVLDMVVMAVI 563
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYA--------------LSSVKHGLHKHILHASQ-EL 706
+ G +T ++ + VN + A + +G + H Q L
Sbjct: 564 AAHPVEMDQGPMTLLKHSVVNANLLAFFCMELCAPDEPTHVPQFANGEINFVPHQGQIHL 623
Query: 707 YKWI---NITVDSFERLSLE----------------STFGWE--SETSFPKALGDIIESL 745
++++ V S LE S + WE + K L DI+ES+
Sbjct: 624 WRFLRSHGPNVKSAREACLERHHGLRDEIRDALEHGSQYPWELFARLRADKFLSDIVESV 683
Query: 746 SGAIFVDSGCNKEV 759
GAIF+D G N +V
Sbjct: 684 LGAIFIDCGGNLDV 697
>gi|391328911|ref|XP_003738926.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1347
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 181/361 (50%), Gaps = 26/361 (7%)
Query: 427 MQNVTIPT-SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSV 485
++N P+ + +L+A+T + E LE +GDSFLK A + ++ + +EG L+
Sbjct: 976 LENCDGPSPADILKALTPLYITDIVDSERLEVIGDSFLKIAVTLHFYQELISSNEGELTT 1035
Query: 486 KKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVT 545
++ RIISN +L + + + F ++ +P L+ L +
Sbjct: 1036 RRCRIISNMSLLQHAVPKGIHEMVECVKFRVRVNFVPPGAQERALLSGRCLKADVAEMSR 1095
Query: 546 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------DFVNV-------P 592
+ KSK AD VEALIG +L G L +L + I + DF++ P
Sbjct: 1096 RSQYYKSKMCADSVEALIGVYLEKCGPVGALEYLRWLDIPLGRYNEGDFLDRFELPLPEP 1155
Query: 593 YERQFQVQAERLVN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
+ ER + ++ L Y F++ L++EA+TH SY + R Y+RLEFLGDA
Sbjct: 1156 LREDKKADVERWRKEILTVQETLGYIFQNELLVLEAITHKSYRYNRLTRSYERLEFLGDA 1215
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN 711
V+DYLI+ Y+Y L+PG LTD+R++ V+N+ +A V + LH + H S L K N
Sbjct: 1216 VIDYLISKYIYTADSDLNPGQLTDVRASLVSNNTFAAIIVDNKLHTVMQHHSPLLLKLTN 1275
Query: 712 ITVDSFE---RLS-LESTFG-------WESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
V+ E R+ L G + PK LGD++ESL GA+F+DSG + +VV
Sbjct: 1276 RFVEYRETEKRIDILAHMMGEEDEDLEDLEQVDIPKPLGDLMESLMGAVFLDSGKDLDVV 1335
Query: 761 F 761
+
Sbjct: 1336 W 1336
>gi|195572986|ref|XP_002104476.1| Dicer-1 [Drosophila simulans]
gi|194200403|gb|EDX13979.1| Dicer-1 [Drosophila simulans]
Length = 1533
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 164/356 (46%), Gaps = 72/356 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF------------ 597
+ K++AD VEALIGA+L G L+F+ +G++V +P RQ
Sbjct: 1182 IPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGS 1237
Query: 598 -QVQAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEA 627
+ AE +V V E L Y FRD S L++A
Sbjct: 1238 TKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQA 1297
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 1298 MTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFA 1357
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE--------------SETS 733
+V+HG HK H S L N +D F R+ E+ +
Sbjct: 1358 SLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECDDAEDVE 1413
Query: 734 FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQ 790
PKALGD+ ES++GAIF+DS + +VV+ ++ P I ++ P REL E +
Sbjct: 1414 VPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELEPE 1473
Query: 791 KHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
F + +A + VTV+V GT + AK A+K L+ LK
Sbjct: 1474 TAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAKCTAAKCALRQLK 1524
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1008 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1067
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1068 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1096
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 999 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1055
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1056 LSHLRSKQVAN 1066
>gi|301770225|ref|XP_002920522.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Ailuropoda melanoleuca]
Length = 1931
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 173/382 (45%), Gaps = 91/382 (23%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSSQ 1614
Query: 601 AERLVNVR----------------------------------------------HLESLL 614
+ L R + E +
Sbjct: 1615 QKNLSGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1674
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 675 DMRSASVNNDCYALSSV--------KHGLHKHILHASQELYKWINITVDSFERLSLEST- 725
D+RSA VNN +A +V HK+ S EL+ +D F + LE
Sbjct: 1735 DLRSALVNNTIFASLAVXXXXXXXXXXDYHKYFKAVSPELFH----VIDDFVQFQLEKNE 1790
Query: 726 -FGWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+
Sbjct: 1791 MQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPL 1850
Query: 772 ITPETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADA 828
I + + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1851 IEKFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGR 1904
Query: 829 DKETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1905 SYRIAKSAAARRALRSLKANQP 1926
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|255953957|ref|XP_002567731.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589442|emb|CAP95586.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1495
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 217/449 (48%), Gaps = 42/449 (9%)
Query: 342 CFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTF 401
C + +L I +N+L K +E++ ++ + P+ I PMS++ +
Sbjct: 933 CIWTQPVLQAELICLRRNFLDKAAEEERASNTRCV--ICPQPLAISAIPMSVAA--TCLV 988
Query: 402 VPSIMHRLQSLLLA------VNLKNMLLDHCMQNVTIPTSKVLEAITTK-KCQEGF--HL 452
P+I+ R++S L+A ++L ++ L++ ++ T + E + + Q G +
Sbjct: 989 FPAIISRMESYLIAQEGCKMLDLGDIKLEYALEAFTKDSDNTEEHRSLQIHVQRGMGKNY 1048
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
E LE LGDS LK A S LF + E V + +I N L K + KL +IR+
Sbjct: 1049 ERLELLGDSVLKMATSISLFAQNPDDDEYDYHVNRMCLICNKNLFKNAIELKLYEYIRSR 1108
Query: 513 PFDPKMWMIPGDNSGSYELN-DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG 571
F MW PG S E DH+ F I G+ + KT+ADV EALIGA L +GG
Sbjct: 1109 GFSRHMWYPPG---LSLEYGRDHAKF----IDSEGKHSLAEKTIADVCEALIGASLLSGG 1161
Query: 572 E-NVGLIFLDRIGIKV-----------DFVNVPYERQFQVQAERLVN---VRHLESLLNY 616
+ N + + + I V D+++ +Q +A R + + Y
Sbjct: 1162 DDNRYDMAIKAVTIFVNSQNHTATSWKDYISAYSIPLYQNRAPDGFEKNLARQIFEKVGY 1221
Query: 617 SFRDPSLLVEALTHGSYMLP--EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
F+ P LL A TH SY L ++P CYQRLEFLGDA+LD + +L++++P P LT
Sbjct: 1222 DFKYPRLLRSAFTHPSYPLAWAKVP-CYQRLEFLGDALLDMVCVEHLFHRFPNRDPQWLT 1280
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG---WESE 731
+ + A V+N +VK GLH H+ H S L + + + ES W S
Sbjct: 1281 EHKMAMVSNKFLGALAVKLGLHLHLQHFSNPLMIQNSKYAEEIQLAESESNGEVDYWLST 1340
Query: 732 TSFPKALGDIIESLSGAIFVDSGCNKEVV 760
+ PK L D++E+ GAIFVDSG + V+
Sbjct: 1341 SDSPKCLPDMLEAYLGAIFVDSGFDFTVI 1369
>gi|194910778|ref|XP_001982226.1| GG12488 [Drosophila erecta]
gi|190656864|gb|EDV54096.1| GG12488 [Drosophila erecta]
Length = 2249
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 168/362 (46%), Gaps = 72/362 (19%)
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQ----- 598
+ + + K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1892 LVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLEGANQE 1947
Query: 599 --------VQAERLVNV----------------------RHL-------ESLLNYSFRDP 621
E++V V HL E L Y FRD
Sbjct: 1948 HRIPGSTKPNVEKMVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEVFEESLGYKFRDR 2007
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE------------ 729
NN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECD 2123
Query: 730 --SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPAREL 785
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I ++ P REL
Sbjct: 2124 DAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIREL 2183
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V GT + AK A+K L+
Sbjct: 2184 LELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAKCTAAKCALRQ 2238
Query: 845 LK 846
LK
Sbjct: 2239 LK 2240
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1724 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1783
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1784 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1812
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1715 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1771
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1772 LSHLRSKQVAN 1782
>gi|70981901|ref|XP_746479.1| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|66844102|gb|EAL84441.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1384
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 198/426 (46%), Gaps = 62/426 (14%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTSKVLEA 440
E C I P +++ F F+ +I+ +L+ L+A L++ +L ++V+ T ++ A
Sbjct: 884 EACTIDRLPFTMAIF--GLFISAIVEQLEIELIATRLRDTIL----RDVSFKSTDHIITA 937
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I+T + + E LGDS LK++ S QLF + N HEG LS +D I+ N L K
Sbjct: 938 ISTPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAA 997
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L +I T+ + W P L +E+ V ++++ +K +ADVVE
Sbjct: 998 LDTGLDAYIVTKRLASRKWSAP-------------LISEKLGRVPAKRQMSTKVLADVVE 1044
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAERLVNVRHLESLLNYS 617
ALIGA GG + + R +++ V R ++ R + L+ + Y+
Sbjct: 1045 ALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMNDRLKDHIGYT 1104
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N GD+T ++
Sbjct: 1105 FEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIK 1164
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKWINITVDSFE---- 718
A VN + A ++ + + L +Q EL++++ +
Sbjct: 1165 HAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARD 1224
Query: 719 ---------RLSLEST------FGWE--SETSFPKALGDIIESLSGAIFVDSGCNK---E 758
R + S+ + W S + K DIIES+ GAIFVDSG N E
Sbjct: 1225 ASLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNLAPCE 1284
Query: 759 VVFESI 764
V E I
Sbjct: 1285 VFVEQI 1290
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 27/269 (10%)
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN-SGSYELNDHSLFNERKIYVTGRKKVK 551
N L + DH G EPF + W++ N S S + + F R+ ++ R++
Sbjct: 807 NPLLMGVVRDHSRYG----EPFLFRKWLVSHQNPSCSIVELECAPFPHRRNFL--RRQTL 860
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD----FVNVPYERQFQVQAERLVNV 607
+ + DV EA+ + +DR+ + F++ E Q +++ L+
Sbjct: 861 ANSQVDVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLFISAIVE-QLEIE---LIAT 916
Query: 608 RHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
R +++L + SF+ ++ A+ S L YQR EFLGD++L + ++ L+ ++P
Sbjct: 917 RLRDTILRDVSFKSTDHIITAI---STPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHP 973
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW-INITVDSFERLSLEST 725
G L++ R V N A +++ GL +I+ KW + + R+ +
Sbjct: 974 NWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLGRVPAKRQ 1033
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
K L D++E+L GA +VD G
Sbjct: 1034 MS-------TKVLADVVEALIGAAYVDGG 1055
>gi|6102924|emb|CAB59269.1| hypothetical protein [Homo sapiens]
Length = 525
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 142/265 (53%), Gaps = 28/265 (10%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
+ + E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 266 ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE 325
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 326 DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLE 381
Query: 724 STF--GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++
Sbjct: 382 KNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMM 441
Query: 769 EPMITPETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTH 825
P+I + + P REL E + + K + A R +GK VTVEV G K
Sbjct: 442 RPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKG 495
Query: 826 ADADKETAKKVASKEVLKSLKASFP 850
AK A+K L+SLKA+ P
Sbjct: 496 VGRSYRIAKSAAAKRALRSLKANQP 520
>gi|159122296|gb|EDP47418.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1384
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 198/426 (46%), Gaps = 62/426 (14%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTSKVLEA 440
E C I P +++ F F+ +I+ +L+ L+A L++ +L ++V+ T ++ A
Sbjct: 884 EACTIDRLPFTMAIF--GLFISAIVEQLEIELIATRLRDTIL----RDVSFKSTDHIITA 937
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I+T + + E LGDS LK++ S QLF + N HEG LS +D I+ N L K
Sbjct: 938 ISTPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAA 997
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L +I T+ + W P L +E+ V ++++ +K +ADVVE
Sbjct: 998 LDTGLDAYIVTKRLASRKWSAP-------------LISEKLERVPAKRQMSTKVLADVVE 1044
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAERLVNVRHLESLLNYS 617
ALIGA GG + + R +++ V R ++ R + L+ + Y+
Sbjct: 1045 ALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMNDRLKDHIGYT 1104
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N GD+T ++
Sbjct: 1105 FEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIK 1164
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKWINITVDSFE---- 718
A VN + A ++ + + L +Q EL++++ +
Sbjct: 1165 HAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARD 1224
Query: 719 ---------RLSLEST------FGWE--SETSFPKALGDIIESLSGAIFVDSGCNK---E 758
R + S+ + W S + K DIIES+ GAIFVDSG N E
Sbjct: 1225 ASLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNLAPCE 1284
Query: 759 VVFESI 764
V E I
Sbjct: 1285 VFVEQI 1290
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 27/269 (10%)
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN-SGSYELNDHSLFNERKIYVTGRKKVK 551
N L + DH G EPF + W++ N S S + + F R+ ++ R++
Sbjct: 807 NPLLMGVVRDHSRYG----EPFLFRKWLVSHQNPSCSIVELECAPFPHRRNFL--RRQTL 860
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD----FVNVPYERQFQVQAERLVNV 607
+ + DV EA+ + +DR+ + F++ E Q +++ L+
Sbjct: 861 ANSQVDVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLFISAIVE-QLEIE---LIAT 916
Query: 608 RHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
R +++L + SF+ ++ A+ S L YQR EFLGD++L + ++ L+ ++P
Sbjct: 917 RLRDTILRDVSFKSTDHIITAI---STPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHP 973
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW-INITVDSFERLSLEST 725
G L++ R V N A +++ GL +I+ KW + + ER+ +
Sbjct: 974 NWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLERVPAKRQ 1033
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
K L D++E+L GA +VD G
Sbjct: 1034 MS-------TKVLADVVEALIGAAYVDGG 1055
>gi|17738129|ref|NP_524453.1| Dicer-1 [Drosophila melanogaster]
gi|51316117|sp|Q9VCU9.1|DCR1_DROME RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1
gi|7300916|gb|AAF56056.1| Dicer-1 [Drosophila melanogaster]
Length = 2249
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 170/374 (45%), Gaps = 74/374 (19%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1882 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1935
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1936 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1995
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1996 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 2055
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--- 726
PG LTD+RSA VNN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2056 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHCIS 2111
Query: 727 -----------GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT-- 773
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I
Sbjct: 2112 EEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQF 2171
Query: 774 PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKET 832
++ P REL E + F + +A + VTV+V GT +
Sbjct: 2172 SNSVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRI 2226
Query: 833 AKKVASKEVLKSLK 846
AK A+K L+ LK
Sbjct: 2227 AKCTAAKCALRQLK 2240
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1724 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1783
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1784 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1812
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1715 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1771
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1772 LSHLRSKQVAN 1782
>gi|158706446|sp|Q4WA22.2|DCL2_ASPFU RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1388
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 198/426 (46%), Gaps = 62/426 (14%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTSKVLEA 440
E C I P +++ F F+ +I+ +L+ L+A L++ +L ++V+ T ++ A
Sbjct: 888 EACTIDRLPFTMAIFG--LFISAIVEQLEIELIATRLRDTIL----RDVSFKSTDHIITA 941
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I+T + + E LGDS LK++ S QLF + N HEG LS +D I+ N L K
Sbjct: 942 ISTPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAA 1001
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L +I T+ + W P L +E+ V ++++ +K +ADVVE
Sbjct: 1002 LDTGLDAYIVTKRLASRKWSAP-------------LISEKLGRVPAKRQMSTKVLADVVE 1048
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAERLVNVRHLESLLNYS 617
ALIGA GG + + R +++ V R ++ R + L+ + Y+
Sbjct: 1049 ALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMNDRLKDHIGYT 1108
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N GD+T ++
Sbjct: 1109 FEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIK 1168
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKWINITVDSFE---- 718
A VN + A ++ + + L +Q EL++++ +
Sbjct: 1169 HAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARD 1228
Query: 719 ---------RLSLEST------FGWE--SETSFPKALGDIIESLSGAIFVDSGCNK---E 758
R + S+ + W S + K DIIES+ GAIFVDSG N E
Sbjct: 1229 ASLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNLAPCE 1288
Query: 759 VVFESI 764
V E I
Sbjct: 1289 VFVEQI 1294
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 27/269 (10%)
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN-SGSYELNDHSLFNERKIYVTGRKKVK 551
N L + DH G EPF + W++ N S S + + F R+ ++ R++
Sbjct: 811 NPLLMGVVRDHSRYG----EPFLFRKWLVSHQNPSCSIVELECAPFPHRRNFL--RRQTL 864
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD----FVNVPYERQFQVQAERLVNV 607
+ + DV EA+ + +DR+ + F++ E Q +++ L+
Sbjct: 865 ANSQVDVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLFISAIVE-QLEIE---LIAT 920
Query: 608 RHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
R +++L + SF+ ++ A+ S L YQR EFLGD++L + ++ L+ ++P
Sbjct: 921 RLRDTILRDVSFKSTDHIITAI---STPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHP 977
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW-INITVDSFERLSLEST 725
G L++ R V N A +++ GL +I+ KW + + R+ +
Sbjct: 978 NWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLGRVPAKRQ 1037
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
K L D++E+L GA +VD G
Sbjct: 1038 MS-------TKVLADVVEALIGAAYVDGG 1059
>gi|149636857|ref|XP_001510982.1| PREDICTED: endoribonuclease Dicer-like [Ornithorhynchus anatinus]
Length = 1921
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 143/260 (55%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY+F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1667 NFERKINYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1726
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1727 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1782
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I
Sbjct: 1783 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1842
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1843 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1896
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1897 RIAKSAAARRALRSLKANQP 1916
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|395330621|gb|EJF63004.1| hypothetical protein DICSQDRAFT_83832 [Dichomitus squalens LYAD-421
SS1]
Length = 1330
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 206/465 (44%), Gaps = 61/465 (13%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
L PE+C P S TF + +PSIM++++S LL L L N I ++L
Sbjct: 761 LIPEMCYKFTIPAS--TFRTLWLMPSIMNKIESYLLVKELNARLF----HNAVI-EQQLL 813
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
A++T F+ E LE LGDSFLK AS + T + H G L + IISN L +
Sbjct: 814 IALSTPAAWTEFNYERLEFLGDSFLKVVASNFCYATMPSVHVGDLHQARQSIISNKVLQE 873
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIP-------------GDNSGSYELNDHS---------L 536
+P +++ + F K+W P G N G E+ +
Sbjct: 874 GATRVGVPSYVQHKRFVAKLWQPPLSTANVAEELKTEGGN-GDVEMTGEAPEKKDKGKRS 932
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV------- 589
+R++ + K +ADVVEA++ A +GG V L R+ + + V
Sbjct: 933 KKQRQLDEQNTLWMGDKIIADVVEAILAASFLSGGHEVALEAARRLQVPIPNVAQWSDYA 992
Query: 590 ------NVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ 643
+ A + + LE L N F LL +ALTH S Y
Sbjct: 993 RLAAHHAAREQTVVMASAPSRMTISVLEKLFNSKFNRLDLLGQALTHTSAFSGAEGTSYD 1052
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS--ASVNNDCYALSSVKHGLHKHILH 701
RLEF+GDA+LD+L++ Y++ ++P LSPG LT +++ A V+N A V GL +++
Sbjct: 1053 RLEFIGDAILDFLVSRYIWERHPYLSPGGLTMLKANGAMVSNQTLAAFCVHVGLQQYLRM 1112
Query: 702 ASQELYKWINITVDSFERL------------SLESTFGWESETSFPKALGDIIESLSGAI 749
S++L I +D E L L + + PK L D++ESL GA+
Sbjct: 1113 ESKDLSTAIQKYIDFLEELRKKEYDFASREQRLPGQYWLDMPMEPPKCLSDVVESLIGAL 1172
Query: 750 FVDSGCNKEVV---FESI-RPLLEPMITPETMRLQPARELNEYCQ 790
+V + V FE++ +P LE + +T+ P L E Q
Sbjct: 1173 YVSDNFFEVGVGRFFETVFKPFLEAHVRLQTLSTNPKITLLELLQ 1217
>gi|395330301|gb|EJF62685.1| hypothetical protein DICSQDRAFT_104190 [Dichomitus squalens LYAD-421
SS1]
Length = 1453
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 195/406 (48%), Gaps = 34/406 (8%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
LP ELCR + P + + SF+ +P + HRL + A ++ L + I ++
Sbjct: 902 LPIELCRWALIPRHV--YQSFSILPELCHRLTDVWRAHEVRTAL-----KLPPIVDDLLV 954
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
+AIT GF+ + LET GD+ LK A L+ Y + HEG L K I+N L
Sbjct: 955 QAITLPSANAGFNNQRLETFGDAVLKLCAVVHLYNRYPHRHEGQLDNMKRTAIANRTLLA 1014
Query: 499 LGCDHKLPGFIRTEPFDPKMW--MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+H L + E ++W ++ GD + LF R R+ + +++
Sbjct: 1015 RALEHGLEEHLTPETQSIRLWRYVVTGDEA---------LFAVRPCRRALRQYPR-RSLQ 1064
Query: 557 DVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQV--QAERLVNVRHLESLL 614
D +EA++GA +TGG ++ L +G+ Y R +A L+ L
Sbjct: 1065 DCMEAILGASFATGGIDMALRAGTALGLSFGGPTPWYVRYSGRLKEAPAAPLFAGLQETL 1124
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
Y+F+ LL+EA+TH S+ + YQRLEFLGDA +D ++T YLY K+P+ + G L+
Sbjct: 1125 GYTFKHGHLLLEAITHPSFRSTDC-SSYQRLEFLGDAFIDMVVTEYLYRKFPSATSGQLS 1183
Query: 675 DMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWIN--ITVDSFERLSLESTFGWESE 731
RS +V +A +VK LHK +L + EL I+ + + GW+ +
Sbjct: 1184 WARSRAVCGPAFASIAVKRLALHKLLLINNVELSMAISKHVPILEEITDEEIIINGWKHD 1243
Query: 732 TSFPKALGDIIESLSGAIFVDSGCN-------KEVVFESIRPLLEP 770
PKAL D++ES+ GA+FVD N E+V E + L P
Sbjct: 1244 P--PKALSDVLESVLGALFVDCDYNYDKAAAITEMVLEDLLAALRP 1287
>gi|194755862|ref|XP_001960198.1| GF13246 [Drosophila ananassae]
gi|190621496|gb|EDV37020.1| GF13246 [Drosophila ananassae]
Length = 1727
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 202/484 (41%), Gaps = 118/484 (24%)
Query: 422 LLDHCMQNVTIPT---SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNH 478
+L M N I S+ L AITT + F +E LE LGDSFLK + S L Y +
Sbjct: 1186 ILQKSMSNEHITAAEQSEFLAAITTSGSADVFDMERLEMLGDSFLKMSGSLYLANRYADW 1245
Query: 479 HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPK-MWMIPG-----------DNS 526
+EG L+ K +++SN L + +P I + F PK W+ PG +N
Sbjct: 1246 NEGTLTQVKSKLVSNRNLLYCLSETDIPTRISSSLFTPKYTWIPPGVSLPRNVLALWNNK 1305
Query: 527 -------GSYELNDHSLFNERKI-----------------------------------YV 544
G + L D +L +E + +
Sbjct: 1306 PDVAKLVGPHNLRDLTLTDEESLITGTCSESTLSTFMDGCRKNMSSHHADTDFSAELNFC 1365
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQA--- 601
GR + K VAD +EAL+G + G G L+ GI + P + ++
Sbjct: 1366 IGRANIADKVVADTLEALLGVVVKNYGLTHGFRMLEYFGICKADIGKPLTQLLDLRLGGA 1425
Query: 602 ------------ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
L+N +LE L Y+F+D L++ALTH SY I CYQ+LEF+G
Sbjct: 1426 NMRTNVSTTEIDSFLINHANLEQNLGYTFKDRGYLLQALTHPSYPTNRITGCYQQLEFIG 1485
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
DA+LD+LI+ Y++ ++PG LTD+RSA VNN A V+H +H IL + L +
Sbjct: 1486 DAILDFLISGYIFENNTKMTPGQLTDLRSALVNNTTLACICVRHKIHLFILAENALLSEA 1545
Query: 710 I----------NITVDSFERLSLEST---------------------------------F 726
I N V + R+ LE +
Sbjct: 1546 IASFVQFQETQNHRVTNHVRILLEENDTTPLDVDGEVKSMEIDETTESEENNGVPTKGDY 1605
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET--MRLQPARE 784
PKALGD++E+L A+++D + ++ I L +P I T + + P R+
Sbjct: 1606 NMSQNVDVPKALGDVLEALIAAVYLDCR-DLHRTWQVIYNLFKPEIKEFTRNVPINPIRQ 1664
Query: 785 LNEY 788
LNE+
Sbjct: 1665 LNEH 1668
>gi|409082707|gb|EKM83065.1| hypothetical protein AGABI1DRAFT_125544 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1430
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 226/494 (45%), Gaps = 45/494 (9%)
Query: 377 FELPPELCRIIMG--PMSLSTFYSFTFVPSIMHRLQSLLLAVNLK-NMLLDHCMQNVTIP 433
F++PP + G MS +F +P++ H++ A + + N+ L IP
Sbjct: 910 FKVPPIVPMNTCGWVDMSPDVIRAFEILPTLCHKITDAYRAQSTRLNIGLPF------IP 963
Query: 434 TSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISN 493
++EA+T F + LETLGD+ L + L Y HEG LS + +SN
Sbjct: 964 DDLLMEALTLPNVDADFSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQLSTLRAGRVSN 1023
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
L +L FI +E + W P YE + +RK + ++++ +
Sbjct: 1024 KFLVSCARTVELERFISSEKMGVEKW--PFVEQKGYEAKE---IRDRK---SVKRQIPRR 1075
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL---VNVRHL 610
+ D VEAL+GA GG + L G+ + ER + +A + V L
Sbjct: 1076 GLQDCVEALLGASFLAGGIPMALRTGVCFGLSFGGIQPWGERCRRAEAREIGVPALVAGL 1135
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E + Y F +P LLVEA+TH S P YQRLEFLGD+V+ L+T YL++K+P +
Sbjct: 1136 EKEIGYVFENPELLVEAVTHPSLEFSSTP-SYQRLEFLGDSVIKMLVTEYLFHKFPKATS 1194
Query: 671 GDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLESTF--G 727
L R+ ++ + A +++ +HK++L S +L IN+ V E + + G
Sbjct: 1195 HQLALPRTKAICSPALAHIAIRKIHIHKYLLQNSIDLNNAINLYVPVLESATADEIVRRG 1254
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKE-------VVFESIRPLLEPMITPETMRLQ 780
W + PKA+ D ES+ GA+FVD G + + + E I +L P I +
Sbjct: 1255 WRYDP--PKAISDAFESVVGAVFVDVGYDLDRTGGIVCRLMEDILEVLNPSIPKD----- 1307
Query: 781 PARELNEY-----CQK-HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
P E+ E+ C K H+ K++ R NG+A +V +G + K ++
Sbjct: 1308 PVSEVLEWLASVGCSKGHNLKFKRSTEER-NGQAVESVSAVFHGQIVAGPIVSNSKAVSR 1366
Query: 835 KVASKEVLKSLKAS 848
A++ +L+AS
Sbjct: 1367 FTAAERAFMALRAS 1380
>gi|348554455|ref|XP_003463041.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Cavia
porcellus]
Length = 1929
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 142/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1675 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1734
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1735 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1790
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I
Sbjct: 1791 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1850
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1851 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1904
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1905 RIAKSAAARRALRSLKANQP 1924
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 597 FQVQAERLVNVRHLESLLNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFL 648
QV +R+ + R S L YS R +P L+++ALT + L +RLE L
Sbjct: 1268 IQVLKDRMDSER--SSSLGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEML 1318
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
GD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1319 GDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
>gi|408394282|gb|EKJ73491.1| hypothetical protein FPSE_06330 [Fusarium pseudograminearum CS3096]
Length = 1451
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 186/396 (46%), Gaps = 59/396 (14%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK-VLEAITTKKCQEGFHLESLETLG 459
+PSI+H L+ L+A L + LL V I + V+EAI+++ E E +E LG
Sbjct: 955 LIPSIIHELEVQLIANELSSTLL----APVGITDLQLVIEAISSRSAAEPVDYERIEFLG 1010
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LKY Q + + EGLL+ KDR++SN L ++ + L FI ++ F W
Sbjct: 1011 DSVLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTRLTRMCLETGLSKFIFSKTFTGIKW 1070
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--- 576
L +++ + R + KT+ADVVEAL+GA GG + L
Sbjct: 1071 R---------PLYRDEFLDKKPVDGVSRF-IGPKTLADVVEALVGASYQDGGISKALECI 1120
Query: 577 -IFLDRIGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTH 630
IFL G K ++ + R +A + LE L+ Y+F SLL+EA+TH
Sbjct: 1121 KIFL---GTKCNWHDDKVARCILFRAATSDVPLPPTMEPLEELIGYTFEKKSLLIEAMTH 1177
Query: 631 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSS 690
GSY R Y++LEFLGDAVLDY++ ++ P + G L +++A N D A ++
Sbjct: 1178 GSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAMANADFLAFTN 1237
Query: 691 VKHGLH----------------------KHILHASQELYKWINITVDSFERLSLESTFGW 728
++HGL K + H+S E+ + +N T FE L E
Sbjct: 1238 MQHGLRRPEVAINDDGEPVSTEVSLPIWKFMRHSSPEMGRIMNETQARFESLQGEINEAR 1297
Query: 729 ESETSFPKAL----------GDIIESLSGAIFVDSG 754
+ +P L DI E+ GAI+VDSG
Sbjct: 1298 TNGKHYPWTLLARLHPKKFYSDIFEATLGAIWVDSG 1333
>gi|429847845|gb|ELA23398.1| dicer-like protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1453
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 149/539 (27%), Positives = 230/539 (42%), Gaps = 93/539 (17%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
P S P + ++ P + F +PSI+HR+++ L+A L LL +
Sbjct: 919 PKPYSRVYPVPMAKVDAIPAKYAHFG--VLIPSILHRIETCLVAKELSTTLLRPLAID-- 974
Query: 432 IPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
S V AI+ E + E LE LGDS LK++A+ + + E LLS KKD I+
Sbjct: 975 -DWSLVHTAISAGSAAEPTNYERLEFLGDSILKFSATINVAALNPDWPERLLSFKKDSIV 1033
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV------- 544
+N+ LCK H L FI T+PF + W R IYV
Sbjct: 1034 ANSTLCKAAIKHGLDRFILTKPFTGQKW--------------------RPIYVEDVLKRG 1073
Query: 545 --TGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------IFLDRIGIKVDFVNVPYE 594
T +++ +KT+AD+VEALIGA + GGE+ GL IFL +I K ++ +
Sbjct: 1074 EDTSTRRISTKTLADIVEALIGASMIDGGEDGGLSKALDCMSIFLQQI--KWRRIDDCRQ 1131
Query: 595 RQFQVQAERL---VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
+ V + + ++ LE L+ Y F SLL++++TH S C +RLEF+GDA
Sbjct: 1132 LLYDVAPDNVELPSTLKPLEELIGYDFDKKSLLIQSMTHASSNFGNPLGCLERLEFIGDA 1191
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG----------------- 694
VLDY+I L++ P LS + +++A VN D S++
Sbjct: 1192 VLDYIIVNRLFSIRPHLSHQSMHLLKTAVVNGDFLGFLSLEQSVEQEEVVIGEIRDKVPE 1251
Query: 695 ---------LHKHILHASQEL-YKWINI----------TVDSFERLSLESTFGWE--SET 732
L K + H S + + INI +D+ E +T+ W +
Sbjct: 1252 LKRSRFTLPLWKFMRHQSSAVGLEQINIEKRHAEMRGPIIDAMEH---GATYPWALLARL 1308
Query: 733 SFPKALGDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMITPETMRLQPARELNEY 788
K DI ESL GA++VD+G C + V I L+ ++ L P EL
Sbjct: 1309 QLRKFYSDIFESLLGAVWVDAGDMKVCEQVVERFGILGCLDRILRDGVHCLHPKEELGHL 1368
Query: 789 CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
K + N + ++ +V K+ K A++ ++ LKA
Sbjct: 1369 ADKESVQYVLSYKELENRERELSCKVMVGTRCVVEVDKGVTKDEVKVKAAEAAVRILKA 1427
>gi|193786026|dbj|BAG51002.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 300 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 359
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF-- 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 360 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 415
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 416 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 475
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 476 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 529
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 530 RIAKSAAARRALRSLKANQP 549
>gi|355778829|gb|EHH63865.1| hypothetical protein EGM_16920 [Macaca fascicularis]
Length = 1910
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1656 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1715
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1716 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1771
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1772 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1831
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1832 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1885
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1886 RIAKSAAARRALRSLKANQP 1905
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1285 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1344
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1345 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1372
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1271 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1323
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1324 PDAHEGRLSYMRSKKVSN 1341
>gi|21665773|emb|CAB38857.2| hypothetical helicase K12H4.8-like protein [Homo sapiens]
Length = 1912
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1658 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1717
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1718 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1773
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1774 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1833
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1834 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1887
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1888 RIAKSAAARRALRSLKANQP 1907
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1374
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1273 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1325
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1326 PDAHEGRLSYMRSKKVSN 1343
>gi|351701180|gb|EHB04099.1| Endoribonuclease Dicer [Heterocephalus glaber]
Length = 1935
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 142/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1681 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1740
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1741 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1796
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I
Sbjct: 1797 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1856
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1857 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1910
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1911 RIAKSAAARRALRSLKANQP 1930
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
L YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 LGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|193787170|dbj|BAG52376.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 566 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 625
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 626 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 681
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 682 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 741
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 742 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 795
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 796 RIAKSAAARRALRSLKANQP 815
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 195 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 254
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 255 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 282
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 614 LNYSFR----DPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYNKYPT 667
+ YS R +P L+++ALT L + +RLE LGD+ L + IT YL+ YP
Sbjct: 181 IGYSSRTLGPNPGLILQALT-----LSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPD 235
Query: 668 LSPGDLTDMRSASVNN 683
G L+ MRS V+N
Sbjct: 236 AHEGRLSYMRSKKVSN 251
>gi|15150411|gb|AAK84929.1| SD01621p [Drosophila melanogaster]
Length = 865
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 166/362 (45%), Gaps = 72/362 (19%)
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF------ 597
+ + + K++AD VEALIGA+L G L+F+ +G++V +P RQ
Sbjct: 508 LVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQE 563
Query: 598 -------QVQAERLVNV-----------------------------RHLESLLNYSFRDP 621
+ AE +V V E L Y FRD
Sbjct: 564 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 623
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 624 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 683
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--------------G 727
NN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 684 NNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHCISEEYYLLSEEECD 739
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPAREL 785
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I ++ P REL
Sbjct: 740 DAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIREL 799
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V GT + AK A+K L+
Sbjct: 800 LELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAKCTAAKCALRQ 854
Query: 845 LK 846
LK
Sbjct: 855 LK 856
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 340 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 399
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 400 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 428
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS++++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 339 PSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQ 395
Query: 681 VNN 683
V N
Sbjct: 396 VAN 398
>gi|409046535|gb|EKM56015.1| hypothetical protein PHACADRAFT_122116 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1496
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 211/426 (49%), Gaps = 38/426 (8%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P LCR P+S + + +P + HRL L A ++ L +Q+ +++
Sbjct: 896 PMSLCR--WAPLSPDVYRALRVLPELTHRLTDLYRARAIRAELGLPPIQD-----DLMIQ 948
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
A+T GF+ + LETLGDS LK LF + + HEG L + + +SN L
Sbjct: 949 ALTLPSANAGFNNQRLETLGDSVLKLCTVVHLFNRFPHRHEGQLDILRRNSVSNRTLLAR 1008
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L ++ +EP ++W SG +L+D +R + +++ +++ D +
Sbjct: 1009 AKEVMLEQYLTSEPQTMRIWRFA--LSGEVDLSDP--MPDRFV----SRRIPKRSLQDCM 1060
Query: 560 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL------VNVRHLESL 613
EA +GA +TGG + L +G + + + +RL V ++ +
Sbjct: 1061 EASLGAGFATGGIMMAL----HVGTALGLGFG-GTLLWPARYDRLPETPVPVMFHEVQEI 1115
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
L Y F+ LL+EA+TH S+ P YQRLEF+GDA++D ++ YLYNK+PT + G L
Sbjct: 1116 LGYEFKSGHLLIEAVTHPSFRSP-TNSSYQRLEFMGDALIDLVVMRYLYNKFPTATSGQL 1174
Query: 674 TDMRSASVNNDCYALSSVK-HGLHKHILHASQELYKWINITVDSFERLSLESTF--GWES 730
+ RS +V A +V GLH+ +L + EL I+ V + S E GW+
Sbjct: 1175 SWARSRAVCAPALAHIAVNVLGLHRPLLINNIELSMAISKYVPILQETSEEEIIHSGWKH 1234
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKE---VVFE-SIRPLLEPMITPETMRLQPARELN 786
+ PKA+ D++ES+ GA+ VD+ N E V+ E ++R LL +++P+ R P EL
Sbjct: 1235 DP--PKAISDVLESILGAVLVDTHYNFEKTAVIAENALRGLLR-VLSPDMPR-DPVSELM 1290
Query: 787 EYCQKH 792
+ +
Sbjct: 1291 VWIARQ 1296
>gi|336365445|gb|EGN93795.1| hypothetical protein SERLA73DRAFT_115225 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1493
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 239/532 (44%), Gaps = 71/532 (13%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
P++ + L P R+++ +S + +PSI+ L + ++L++ L +
Sbjct: 962 PAEKTVLLLPRYTRVVL--LSPAETEYAQILPSIIRHLSVMTTVISLRDTLFTGTPLS-K 1018
Query: 432 IPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
IP + A+T Q + E LETLGD LK+ S L + + HEG L+ +KD +
Sbjct: 1019 IPLPLLTTALTAPVSQGLINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHGV 1078
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWM----IPGDNSGSYELNDHSLFNERKIYVTGR 547
SNA L K KL +I + F P+ W P N + ++ +
Sbjct: 1079 SNAQLAKNAVLKKLYRWIIRDRFTPRKWTPRYCTPPQNEDQIKEEVEVEGSDSRKSRAVI 1138
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP--YERQFQV---QAE 602
+++ +K +ADVVE+LIGA GG ++G+ G+ +++ + E V +
Sbjct: 1139 EELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGLGLEWWGLAKCVETALSVVETTDD 1198
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V +E +L Y+F LL+EALTH S+ Y+R+EFLGD++LD +IT YLY
Sbjct: 1199 FPAQVTDVELMLGYNFTRKLLLIEALTHASHQFDTRTVSYERMEFLGDSILDMIITDYLY 1258
Query: 663 N-KYPTLSPGDLTDMRSASVNNDCYALSSVKHGL----------HKHIL---HASQELYK 708
+ SPG + +S+ VN A +++ L H+ + SQE+Y
Sbjct: 1259 HVPGKGYSPGHMHMRKSSVVNTHFLAFICLRNSLKVDTSMPGPNHEGRITLNTQSQEIYL 1318
Query: 709 W----------INITVDSFER-----------LSLESTFGWESETSF--PKALGDIIESL 745
W + +F R L +S F W + T PK D+IESL
Sbjct: 1319 WQCLLHSSHTILEDQKTTFSRYNKVKAQIEDALQNDSIFPWAALTKLQAPKFFSDMIESL 1378
Query: 746 SGAIFVDSGCNKEVVFESIR-----PLLEPMITPETMRLQPARELNEYCQKHHFSMKK-- 798
GA ++DSG N VV E +R P LE ++ + L P ++ + Q+ + +++
Sbjct: 1379 IGAAYLDSGGNINVVREILRKLGILPTLERIVRDDVDVLHPVSRVSLWTQREYKTIEYIF 1438
Query: 799 -------TVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
T + I+GK AV G A +E AK A+++ +K
Sbjct: 1439 NEEGGGVTCSILIDGKEAVRAHNERRG--------HAGQEEAKYEAAEKAIK 1482
>gi|383872414|ref|NP_001244801.1| endoribonuclease Dicer [Macaca mulatta]
gi|380811118|gb|AFE77434.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811120|gb|AFE77435.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811122|gb|AFE77436.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811124|gb|AFE77437.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|383417045|gb|AFH31736.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
Length = 1920
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1666 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1725
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1726 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1781
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1782 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1841
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1842 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1895
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1896 RIAKSAAARRALRSLKANQP 1915
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1382
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1281 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1333
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1334 PDAHEGRLSYMRSKKVSN 1351
>gi|296215835|ref|XP_002754306.1| PREDICTED: endoribonuclease Dicer isoform 3 [Callithrix jacchus]
Length = 1922
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 586
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKV 1590
>gi|402877099|ref|XP_003902280.1| PREDICTED: endoribonuclease Dicer isoform 1 [Papio anubis]
gi|402877101|ref|XP_003902281.1| PREDICTED: endoribonuclease Dicer isoform 2 [Papio anubis]
gi|402877103|ref|XP_003902282.1| PREDICTED: endoribonuclease Dicer isoform 3 [Papio anubis]
Length = 1920
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1666 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1725
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1726 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1781
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1782 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1841
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1842 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1895
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1896 RIAKSAAARRALRSLKANQP 1915
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1382
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1281 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1333
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1334 PDAHEGRLSYMRSKKVSN 1351
>gi|299754132|ref|XP_002911949.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
gi|298410618|gb|EFI28455.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
Length = 1457
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 219/456 (48%), Gaps = 43/456 (9%)
Query: 376 SFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS 435
++ LP + CR++ P SLS +F +P++ ++ + A + L +++ +
Sbjct: 905 TYILPRDCCRVLHFPTSLSN--TFRVLPALCRKITDIYRARVARIALRLPFIEDKIL--- 959
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
+E++T F + LETLGD+ L+ + LF Y N HEG L+ + +SN
Sbjct: 960 --IESLTIPAALLAFSNQRLETLGDAVLQLCTTVHLFNQYPNRHEGQLTTLRRATVSNKF 1017
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMW-MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
L + + L +I E W I G+++ + R + R V ++
Sbjct: 1018 LLQRALEMGLEEYITVEIASVARWRYILGEDADTAP--------PRSV----RTLVPRRS 1065
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRH----L 610
+ D +EAL+GA GG + L +G++ +P+E +++ + V H L
Sbjct: 1066 LQDCMEALLGASFLQGGIPMALQAGPSLGVEFGG-PLPWEMRYERKGPAEVATTHLFDTL 1124
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ L Y+F S+LVEA+TH S+ + P YQRLEFLGDA+LD ++ YLY K+P +
Sbjct: 1125 QERLGYTFHSNSILVEAVTHPSFAT-DGP-SYQRLEFLGDAILDLVVVHYLYEKFPEANS 1182
Query: 671 GDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
L+ +R+ + A ++K G+HK +L + LY+ I V FE ++ E
Sbjct: 1183 HQLSLLRAKVICAPTLAYLAIKELGVHKILLINNMGLYRAIEAYVPVFEDITDEEIARSY 1242
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKE----VVFESIRPLLEPMITPETMRLQPAREL 785
+ PKA+ D+ ESL GA+ VDSG N + VV + + +L+ + M P L
Sbjct: 1243 YKFDPPKAISDVFESLVGAVLVDSGYNYDKTSAVVLDIMSKVLDQLSL--DMAKDPVSLL 1300
Query: 786 NEYCQKH-----HFSMKKTVAPRINGKAAVTVEVHA 816
E+ +H FS + + N A V +EVH
Sbjct: 1301 LEWVAQHGCREISFSKNR----KFNYDAGVVLEVHG 1332
>gi|315051166|ref|XP_003174957.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
gi|311340272|gb|EFQ99474.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
Length = 1425
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 205/421 (48%), Gaps = 63/421 (14%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKV 437
+P I M PM + F F+PS++H + LLA +L N +L +++ + V
Sbjct: 920 IPARQSSISMLPMGFTKFA--LFIPSLIHSIGRFLLAEDLSNTILSSIGFKDIKL----V 973
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT +E + + LE LGDS LK AS QL + HEG+LS KKD I+SN+ L
Sbjct: 974 LTAITATSARENTNYQRLEFLGDSALKLHASMQLLADHPIWHEGILSKKKDSIVSNSRLW 1033
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
K D L FI T F W P NS +Y N + E+ +++ +KT+AD
Sbjct: 1034 KAAVDTGLDRFILTTCFTGAKWR-PLYNS-TYRHNVGTARREQT------RELSTKTLAD 1085
Query: 558 VVEALIGAFLSTGGENVGL----IFLDRIGI--KVDFVNVPYER--QFQVQAERLVNVRH 609
VVE+LIGA + GGEN L +FL I + V + Y+ F R + +
Sbjct: 1086 VVESLIGAAIVDGGENKVLRCLELFLPEINWLPSGERVEILYDSAPDFSDDFPRDI-LSK 1144
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E L++YSF +LL +L+H S ++ + YQRLEFLGD++LD ++T L+ +
Sbjct: 1145 IEPLIDYSFTKRALLAASLSHPSNLISGM--TYQRLEFLGDSILDNVVTRALFRCDKEIP 1202
Query: 670 PGDLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHILH-A 702
D+ +R+A VN D A S+ + L +++ H A
Sbjct: 1203 HQDMHLIRTALVNADFLAFLCMKTSTDERREDVCASPTGNVKVTSSTRRVSLWQYMAHSA 1262
Query: 703 SQELYKWINITVDSFERLSLE--------STFGWE--SETSFPKALGDIIESLSGAIFVD 752
S ++ + +FE+L E + + W S + PK DI+ES+ GAIF+D
Sbjct: 1263 SLDILETQQAMACTFEKLRDEIDDALRSGTRYPWTLLSTLNAPKFFSDIVESILGAIFID 1322
Query: 753 S 753
S
Sbjct: 1323 S 1323
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L + F+D L++ A+T S YQRLEFLGD+ L ++ L +P G
Sbjct: 962 LSSIGFKDIKLVLTAITATS---ARENTNYQRLEFLGDSALKLHASMQLLADHPIWHEGI 1018
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESET 732
L+ + + V+N ++V GL + IL KW + +S R ++ + ++
Sbjct: 1019 LSKKKDSIVSNSRLWKAAVDTGLDRFILTTCFTGAKWRPL-YNSTYRHNVGTARREQTRE 1077
Query: 733 SFPKALGDIIESLSGAIFVDSGCNK 757
K L D++ESL GA VD G NK
Sbjct: 1078 LSTKTLADVVESLIGAAIVDGGENK 1102
>gi|403274211|ref|XP_003928879.1| PREDICTED: endoribonuclease Dicer isoform 1 [Saimiri boliviensis
boliviensis]
gi|403274213|ref|XP_003928880.1| PREDICTED: endoribonuclease Dicer isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1922
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|355683929|gb|AER97238.1| dicer 1, ribonuclease type III [Mustela putorius furo]
Length = 560
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 142/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 307 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 366
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF-- 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 367 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 422
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I
Sbjct: 423 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 482
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 483 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 536
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 537 RIAKSAAARRALRSLKANQP 556
>gi|119602001|gb|EAW81595.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1923
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1669 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1728
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1729 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1784
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1785 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1844
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1845 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1898
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1899 RIAKSAAARRALRSLKANQP 1918
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1284 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1336
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1337 PDAHEGRLSYMRSKKVSN 1354
>gi|395827764|ref|XP_003787065.1| PREDICTED: endoribonuclease Dicer isoform 1 [Otolemur garnettii]
gi|395827766|ref|XP_003787066.1| PREDICTED: endoribonuclease Dicer isoform 2 [Otolemur garnettii]
Length = 1921
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1667 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1726
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1727 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1782
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1783 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1842
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1843 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1896
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1897 RIAKSAAARRALRSLKANQP 1916
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1382
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1291 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1343
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1344 MRSKKVSN 1351
>gi|297695799|ref|XP_002825114.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pongo abelii]
gi|297695801|ref|XP_002825115.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pongo abelii]
gi|297695803|ref|XP_002825116.1| PREDICTED: endoribonuclease Dicer isoform 3 [Pongo abelii]
Length = 1922
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|426377909|ref|XP_004055696.1| PREDICTED: endoribonuclease Dicer isoform 1 [Gorilla gorilla gorilla]
gi|426377911|ref|XP_004055697.1| PREDICTED: endoribonuclease Dicer isoform 2 [Gorilla gorilla gorilla]
gi|426377913|ref|XP_004055698.1| PREDICTED: endoribonuclease Dicer isoform 3 [Gorilla gorilla gorilla]
Length = 1922
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|29294649|ref|NP_085124.2| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|29294651|ref|NP_803187.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|404312696|ref|NP_001258211.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|257051056|sp|Q9UPY3.3|DICER_HUMAN RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase with
RNase motif; Short=Helicase MOI
gi|20521696|dbj|BAA76772.2| KIAA0928 protein [Homo sapiens]
gi|119602002|gb|EAW81596.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Homo sapiens]
gi|152012889|gb|AAI50288.1| Dicer 1, ribonuclease type III [Homo sapiens]
gi|307685563|dbj|BAJ20712.1| dicer 1, ribonuclease type III [synthetic construct]
Length = 1922
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|397525875|ref|XP_003832878.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pan paniscus]
gi|397525877|ref|XP_003832879.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pan paniscus]
Length = 1922
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|114654619|ref|XP_001154369.1| PREDICTED: endoribonuclease Dicer isoform 6 [Pan troglodytes]
gi|410048689|ref|XP_003952618.1| PREDICTED: endoribonuclease Dicer [Pan troglodytes]
gi|410219112|gb|JAA06775.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256210|gb|JAA16072.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256212|gb|JAA16073.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306234|gb|JAA31717.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306236|gb|JAA31718.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351815|gb|JAA42511.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351817|gb|JAA42512.1| dicer 1, ribonuclease type III [Pan troglodytes]
Length = 1922
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|321461347|gb|EFX72380.1| hypothetical protein DAPPUDRAFT_308316 [Daphnia pulex]
Length = 1741
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 164/320 (51%), Gaps = 29/320 (9%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-----------------DFVNVP 592
+ K++AD VEALIGA+L G L+F+ +G+KV V+ P
Sbjct: 1417 IPDKSIADCVEALIGAYLRACGPRGALLFMSWLGLKVLPVINEGSYGYWTPPISPLVDQP 1476
Query: 593 YERQFQVQAER-LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
+ V+ +R L E + Y F D S L++A +H SY L + CYQRLEFLGDA
Sbjct: 1477 LD--IHVELDRMLAGFESFEEKICYKFNDRSYLLQAFSHASYYLNRLTDCYQRLEFLGDA 1534
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS----QELY 707
VLDYLIT YLY P PG LTD+RSA VNN +A+ + ++ H++ H S Q +
Sbjct: 1535 VLDYLITRYLYENLPRHPPGALTDLRSALVNNTTFAVLAERYEFHRYFKHLSPSLNQIMD 1594
Query: 708 KWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
K+I ++ ++ E + PK LGD+ ES++GAI++DS + V+ +
Sbjct: 1595 KFIKAQEENGHSINEEYYMIEAEDVEVPKVLGDVFESVAGAIYLDSHMSLNAVWRVYYNM 1654
Query: 768 LEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHA 826
++ I E + P + E + +K A R+ +G+ VTV+V GT FK
Sbjct: 1655 MKKEID-EFSKNVPKSPIRELLELETDRVKFGKAERLPDGRLRVTVDVIGKGT-FKGI-- 1710
Query: 827 DADKETAKKVASKEVLKSLK 846
+ AK A+K L++L+
Sbjct: 1711 GRNYRIAKCTAAKYALRTLE 1730
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A T +G +LE LET+GDSFLKYA + L+ Y + HEG LS + R +SN
Sbjct: 1240 SVILQAFTMSSANDGINLERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLRSRQVSNL 1299
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIPG 523
L +LG G + F+P + W+ PG
Sbjct: 1300 HLYQLGKKKLFGGCMVATKFNPHENWLPPG 1329
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 180/428 (42%), Gaps = 70/428 (16%)
Query: 47 ICTLYLPNNCPI-QTVIAQG--NIKTLKQTACLEACKKLHQIGALTDNLLP--------- 94
IC+L LP N P+ +TV++Q + T K++A LEAC+ LHQ L D+ P
Sbjct: 572 ICSLQLPINSPLRKTVLSQPMPSKVTAKRSAALEACRLLHQKKELDDHFYPTGKENLRLE 631
Query: 95 -----DVVVEEHDAQKHGNEPYDAEHPIYFPPEL----VNQCPQDTKITYHCYLIELKQN 145
+ +EE + ++ P + Y+ ++ +N P+ + CYL +
Sbjct: 632 EEEDYNADLEEENVPENLPRPGTTKRRQYYYKQVADPFINGIPRPDQ---PCYLYAITMV 688
Query: 146 FNYDIPAHDIVLAVRT-ELESEIKKVN------------FDLEVDRGRLTVNLKHLG-KI 191
+ IP + + E+ I+ + F + G + V + + I
Sbjct: 689 LSEPIPEEQNTRGRKIYKPETSIQSLGILNSKPLSQICPFPIFTRSGEVEVEIVKISDAI 748
Query: 192 QLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEP 251
++T ++ FQ +FR ++ +L+K + +L ++ N + YL++P S
Sbjct: 749 RVTEGQLKQISDFQRYIFRNVL--SLEK-DPMLLDVY---NADCSYLIVPLRRSSFSEHS 802
Query: 252 VASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP-----HSGQIYYI 306
SL F + ++ A V +SG + +++ V Q +Y+
Sbjct: 803 KLSLDFVFIDLISSVRDSKPQLIAEEV--RSGYVFDPRLFSDAVVMKWYRDQEHPQCFYV 860
Query: 307 TGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN-----GRRIFHAQNYL 361
+ LN S F D T++K+Y +YGIQ+ ++ LL+ R F Y+
Sbjct: 861 AEIFYELNPQSKFP--DNNYPTFEKYYRHKYGIQIQNLKQPLLDVDHTSARLNFLTPRYV 918
Query: 362 ----------SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQS 411
S+ ++ QRE + L PELC I P S S + +P I++RL
Sbjct: 919 NRKGVMLPTSSEHTKKTQRESLQQKQILVPELCSI--HPFSASLWRQAVCLPCILYRLNG 976
Query: 412 LLLAVNLK 419
LLLA L+
Sbjct: 977 LLLAEQLR 984
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS++++A T S +RLE +GD+ L Y IT YLY KY ++ G+L+ +RS
Sbjct: 1239 PSVILQAFTMSS---ANDGINLERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLRSRQ 1295
Query: 681 VNN 683
V+N
Sbjct: 1296 VSN 1298
>gi|332223646|ref|XP_003260983.1| PREDICTED: endoribonuclease Dicer isoform 1 [Nomascus leucogenys]
gi|332223648|ref|XP_003260984.1| PREDICTED: endoribonuclease Dicer isoform 2 [Nomascus leucogenys]
gi|441666339|ref|XP_004091884.1| PREDICTED: endoribonuclease Dicer [Nomascus leucogenys]
Length = 1922
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1844 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1897
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|336378007|gb|EGO19166.1| hypothetical protein SERLADRAFT_443209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1489
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 239/532 (44%), Gaps = 71/532 (13%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
P++ + L P R+++ +S + +PSI+ L + ++L++ L +
Sbjct: 958 PAEKTVLLLPRYTRVVL--LSPAETEYAQILPSIIRHLSVMTTVISLRDTLFTGTPLS-K 1014
Query: 432 IPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
IP + A+T Q + E LETLGD LK+ S L + + HEG L+ +KD +
Sbjct: 1015 IPLPLLTTALTAPVSQGLINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHGV 1074
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWM----IPGDNSGSYELNDHSLFNERKIYVTGR 547
SNA L K KL +I + F P+ W P N + ++ +
Sbjct: 1075 SNAQLAKNAVLKKLYRWIIRDRFTPRKWTPRYCTPPQNEDQIKEEVEVEGSDSRKSRAVI 1134
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP--YERQFQV---QAE 602
+++ +K +ADVVE+LIGA GG ++G+ G+ +++ + E V +
Sbjct: 1135 EELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGLGLEWWGLAKCVETALSVVETTDD 1194
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V +E +L Y+F LL+EALTH S+ Y+R+EFLGD++LD +IT YLY
Sbjct: 1195 FPAQVTDVELMLGYNFTRKLLLIEALTHASHQFDTRTVSYERMEFLGDSILDMIITDYLY 1254
Query: 663 N-KYPTLSPGDLTDMRSASVNNDCYALSSVKHGL----------HKHIL---HASQELYK 708
+ SPG + +S+ VN A +++ L H+ + SQE+Y
Sbjct: 1255 HVPGKGYSPGHMHMRKSSVVNTHFLAFICLRNSLKVDTSMPGPNHEGRITLNTQSQEIYL 1314
Query: 709 W----------INITVDSFER-----------LSLESTFGWESETSF--PKALGDIIESL 745
W + +F R L +S F W + T PK D+IESL
Sbjct: 1315 WQCLLHSSHTILEDQKTTFSRYNKVKAQIEDALQNDSIFPWAALTKLQAPKFFSDMIESL 1374
Query: 746 SGAIFVDSGCNKEVVFESIR-----PLLEPMITPETMRLQPARELNEYCQKHHFSMKK-- 798
GA ++DSG N VV E +R P LE ++ + L P ++ + Q+ + +++
Sbjct: 1375 IGAAYLDSGGNINVVREILRKLGILPTLERIVRDDVDVLHPVSRVSLWTQREYKTIEYIF 1434
Query: 799 -------TVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
T + I+GK AV G A +E AK A+++ +K
Sbjct: 1435 NEEGGGVTCSILIDGKEAVRAHNERRG--------HAGQEEAKYEAAEKAIK 1478
>gi|195502701|ref|XP_002098342.1| GE24009 [Drosophila yakuba]
gi|194184443|gb|EDW98054.1| GE24009 [Drosophila yakuba]
Length = 2250
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 169/374 (45%), Gaps = 74/374 (19%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1883 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1936
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + E +V V
Sbjct: 1937 PITRQLDEASQEHRIPGSTKPNPENMVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFDE 1996
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1997 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 2056
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
PG LTD+RSA VNN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2057 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSIS 2112
Query: 730 --------------SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT-- 773
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I
Sbjct: 2113 EEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQF 2172
Query: 774 PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKET 832
++ P REL E + F + +A + VTV+V GT +
Sbjct: 2173 SNSVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRI 2227
Query: 833 AKKVASKEVLKSLK 846
AK A+K L+ LK
Sbjct: 2228 AKCTAAKCALRQLK 2241
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1725 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1784
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1785 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1813
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1716 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1772
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1773 LSHLRSKQVAN 1783
>gi|194225335|ref|XP_001496219.2| PREDICTED: endoribonuclease Dicer [Equus caballus]
Length = 1785
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 142/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1531 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1590
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1591 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1646
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I
Sbjct: 1647 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1706
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1707 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1760
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1761 RIAKSAAARRALRSLKANQP 1780
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1162 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1221
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1222 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1249
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1158 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1210
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1211 MRSKKVSN 1218
>gi|5019620|dbj|BAA78691.1| helicase-MOI [Homo sapiens]
Length = 1924
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 141/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1670 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1729
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1730 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1785
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 1786 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1845
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 1846 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 1899
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 1900 RIAKSAAARRALRSLKANQP 1919
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1386
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1285 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1337
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1338 PDAHEGRLSYMRSKKVSN 1355
>gi|429848709|gb|ELA24159.1| RNase3 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1561
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 201/444 (45%), Gaps = 79/444 (17%)
Query: 383 LCRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTS 435
+C +I+ P+ +ST +F F P+I+HR+ S+++A LD C N+TI
Sbjct: 1022 ICYVILQPLRVSTLPIETVVLAFAF-PAIIHRMDSVMIA-------LDACKHLNLTIRPD 1073
Query: 436 KVLEAITTK--------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
LEA+T + G + E LE LGD FLK A + +F + + E
Sbjct: 1074 LALEAMTKDSDNNDEHDQEKINFQSGMGKNYERLEFLGDCFLKMATTIAIFTSKPDDDEF 1133
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
V++ +I N L D L ++R++ FD + W G L ++
Sbjct: 1134 QYHVQRMLLICNQNLFNKAVDRGLQEYVRSQSFDRRSWYPQG----------LKLMRGKQ 1183
Query: 542 IYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKV-----------DFV 589
+ + K++ADV EALIGA +LS + + + + V D+V
Sbjct: 1184 GQPANKHALADKSIADVCEALIGAAYLSYADSDNYDMAIRAVTAMVKEKTHRMTSWGDYV 1243
Query: 590 NVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---- 642
++Q + + + +E + Y F+ P+LL A H SY PR Y
Sbjct: 1244 AGYRHPEWQFRKPTPIQRDMAQQVEESMGYKFKSPALLRSAFHHPSY-----PRAYESLP 1298
Query: 643 --QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
QRLEFLGDA+LD + +L+NK+P P LT+ + A V+N A SVK GLHKHIL
Sbjct: 1299 DYQRLEFLGDALLDMVCVDFLFNKFPNADPQWLTEHKMAMVSNQFLASLSVKLGLHKHIL 1358
Query: 701 HAS-------QELYKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIF 750
+ +E +N+ + E + F W + PK L D++E+ GA+F
Sbjct: 1359 VGTSAMLSQKEEYVSSLNLAMAEAESGAESGMFSQDYWINVKHSPKYLSDVLEAYVGAVF 1418
Query: 751 VDSGCNKEVVFESIRPLLEPMITP 774
VDSG + + +R + I P
Sbjct: 1419 VDSGYD----YNEVRKFFDKHIRP 1438
>gi|255933596|ref|XP_002558177.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582796|emb|CAP80997.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1393
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 192/436 (44%), Gaps = 59/436 (13%)
Query: 366 QEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH 425
++ + + K S+ LP C I P + F F+ +I+ RL++ L+A L + +L
Sbjct: 880 EDGEADAPKKSYILPAAACVIDKLPAKQAVFG--LFISAILDRLEASLVAHRLNDTIL-- 935
Query: 426 CMQNVTIP-TSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
+ V I + V+ AI+ Q + + E GDS LK+ S QLF N HEG LS
Sbjct: 936 --KGVGIKDIAHVITAISAPIAQASTNYQRYEFFGDSVLKFTVSCQLFFRNGNWHEGYLS 993
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
+D++I N+ L + D + F+ T F P+ W P L +
Sbjct: 994 ESRDKLIQNSRLARAALDLGIDSFVLTSRFTPRKWTTP-------------LIRNKLEPS 1040
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAE-- 602
T ++ + +K +ADVVE+LIGA GG L R +++ Q +
Sbjct: 1041 TAKRNISTKVLADVVESLIGAAYVDGGIREAQACLHRFLPEINLFTNDISPLILPQGKGV 1100
Query: 603 -RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
L+N L L+ Y+F DP+LL EALTH S + YQRLEFLGDAVLD ++ +
Sbjct: 1101 SNLINHHRLAGLIGYTFNDPALLTEALTHASCEYDTSTQSYQRLEFLGDAVLDMVVMAVI 1160
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT-------- 713
+ G +T ++ + VN + A ++ H +Q IN+
Sbjct: 1161 AGHPVEMDQGPMTLLKHSVVNANLLAFFCMELCAPDEPSHVTQFTNGGINLVPRYDQIHL 1220
Query: 714 ----------VDSFERLSLESTFGWESE--------TSFP----------KALGDIIESL 745
+ S + LE G +E T +P K L DIIES+
Sbjct: 1221 WRFLRSHGPNIKSAQEACLERHQGLRAEIRDALENGTQYPWELFARLRADKFLSDIIESV 1280
Query: 746 SGAIFVDSGCNKEVVF 761
GAIF+D G + +V +
Sbjct: 1281 LGAIFIDCGGDLDVCY 1296
>gi|380481939|emb|CCF41547.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1588
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 217/495 (43%), Gaps = 92/495 (18%)
Query: 382 ELCRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPT 434
++C +I+ PM +ST +F F P+++HR+ S+++A LD C + + I
Sbjct: 1051 KICYLILEPMRVSTLPIDTVVMAFAF-PALIHRIDSVMIA-------LDACKLLELNIRP 1102
Query: 435 SKVLEAITTK--------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHE 480
LEA+T + G + E LE LGD FLK A + +F + +E
Sbjct: 1103 DLALEAVTKDSDNSDEHDKEKINFQSGMGKNYERLEFLGDCFLKMATTIAIFTENPDSNE 1162
Query: 481 GLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNER 540
V + +I N L D LP ++R++ FD + W G L +
Sbjct: 1163 FGYHVDRMLLICNQNLFNKAVDRNLPEYVRSKSFDRRSWYPSG----------LRLIRGK 1212
Query: 541 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DF 588
+ V R + K+VADV EALIGA T ++ R V D+
Sbjct: 1213 EGSVNLRHALADKSVADVCEALIGAAYLTYADSSDFDMAIRAVTAVVKSKNHLMTSWGDY 1272
Query: 589 --VNVPYERQFQ----VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY 642
P QF +Q E R ++ L Y F+ P+LL A H SY PR Y
Sbjct: 1273 YAAYTPPAWQFADPTPMQKEL---ARQIKDKLGYEFKSPALLRSAFKHPSY-----PRAY 1324
Query: 643 ------QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
QRLEFLGDA+LD + +L++K+P P LT+ ++A V+N A VK GLH
Sbjct: 1325 ENLPDYQRLEFLGDALLDMVCVDFLFHKFPDADPQWLTEHKTAMVSNQFLASLCVKLGLH 1384
Query: 697 KHILHASQELYKWINITVDSFERL----SLESTFG---WESETSFPKALGDIIESLSGAI 749
KH+L L + V S E + TF W + PK L D++E+ GAI
Sbjct: 1385 KHVLSGHASLLNQTHDFVVSLESAKKDGEADGTFTQAYWINVQHAPKYLSDVVEAYIGAI 1444
Query: 750 FVDSGCNK---EVVFES-IRPLLEPMITPETMRLQ-PARELNEY------CQKHHFSMKK 798
F+DSG + V F++ IRP M ++ + P L CQ+ M
Sbjct: 1445 FIDSGYDYNHVRVFFDTHIRPFFTDMALYDSFASRHPVTNLAHILQDGFGCQEWRL-MVS 1503
Query: 799 TVAPRIN--GKAAVT 811
VAP + G AA+T
Sbjct: 1504 EVAPTVEEFGAAAIT 1518
>gi|392585234|gb|EIW74574.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1534
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 201/441 (45%), Gaps = 53/441 (12%)
Query: 359 NYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL 418
N+L + +R K L PE + + + F VPSI+ + A +L
Sbjct: 963 NFLHPAEKRSRRSSEKARKLLIPEYSFVELVSPVEAEFA--LLVPSILRYISVANTAASL 1020
Query: 419 KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNH 478
+ LL Q IP S V AI+ QE + + LE+LGD+ LK L+ +
Sbjct: 1021 RATLLTDP-QLAEIPLSLVKMAISAPVSQEPTNYQRLESLGDAVLKLVVGAYLYSEHPLW 1079
Query: 479 HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM--IPGDNSGSYELNDHSL 536
HEG L+ ++D +SN L K KL +I + F PK +M DN G+ ++S
Sbjct: 1080 HEGYLTQRRDHAVSNVRLAKSAIQKKLYRWIVRDHFAPKRFMPRYLTDNRGATNEEENSD 1139
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 596
N G++ + +K +ADVVE+LIGA GG + + + I + + + +
Sbjct: 1140 ENGNG---KGKEDLSTKVLADVVESLIGAAYVHGGFELAISLIRTIDVHLALSPLSASIE 1196
Query: 597 FQVQA-----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 651
A E V H+++++ Y+F P LLVEALTH S+ Y+RLEFLGDA
Sbjct: 1197 AAYAAADPSLEAPPQVAHVQNMIGYTFTKPLLLVEALTHASHQTDLRTVSYERLEFLGDA 1256
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY-----------------ALSSVKHG 694
VLD LI YLY SPG++T +R ++ N + A ++HG
Sbjct: 1257 VLDMLIADYLYKHPKNFSPGEIT-LRKHAIGNALFLSYACLSSCTPVDASVPAPDPLRHG 1315
Query: 695 ------------LHKHILHASQELY--------KWINITVDSFERLSLESTFGWESETSF 734
L++ +LH+S L ++ ++ LS S F W T
Sbjct: 1316 KITLRAKTEHIYLYQCMLHSSSALLDEQKGAFARFASVGGPLARSLSHSSVFPWAELTRL 1375
Query: 735 --PKALGDIIESLSGAIFVDS 753
PK L DI+ES+ GA+++D+
Sbjct: 1376 QAPKILSDIVESVIGAVYIDA 1396
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQRLE LGDAVL ++ YLY+++P G LT R +V+N A S+++ L++
Sbjct: 1050 PTNYQRLESLGDAVLKLVVGAYLYSEHPLWHEGYLTQRRDHAVSNVRLAKSAIQKKLYRW 1109
Query: 699 ILH---ASQEL---YKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVD 752
I+ A + Y N + E S E+ G E K L D++ESL GA +V
Sbjct: 1110 IVRDHFAPKRFMPRYLTDNRGATNEEENSDENGNGKGKEDLSTKVLADVVESLIGAAYVH 1169
Query: 753 SG 754
G
Sbjct: 1170 GG 1171
>gi|380492403|emb|CCF34628.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1362
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 224/517 (43%), Gaps = 88/517 (17%)
Query: 392 SLSTFYSF--TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEG 449
++ST Y+ +PSI+HR+++ L+A L LL ++ P + VL AI+T E
Sbjct: 846 TVSTDYARFGVLIPSILHRIETHLVARELSAGLLRPLA--ISDP-ALVLTAISTGSAAEP 902
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
+ E +E LGDS LK++ + + + E LLS KKD I++N+ LCK H L FI
Sbjct: 903 TNYERIEFLGDSILKFSTTINVAALNPDWPERLLSFKKDGIVANSTLCKAAIKHGLDRFI 962
Query: 510 RTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV---------TGRKKVKSKTVADVVE 560
T+PF + W R IYV +++ +KT+AD+VE
Sbjct: 963 LTKPFTGQKW--------------------RPIYVDDVLHRGDEKSTRRISTKTLADIVE 1002
Query: 561 ALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYERQFQVQAERLVNVRHLESLL 614
ALIGA + GG L IFL +I + D Y+ E + LE L+
Sbjct: 1003 ALIGASMIDGGLEKALKCMSIFLQQIKWRTLDDCRQALYDAA-PPDVELPSTLEPLEQLV 1061
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
+ F+ +LLV+++TH S+ L C +RLEF+GD+VLDY+I L+ P LS +
Sbjct: 1062 GHEFKKKALLVQSMTHASFTLGNTLGCLERLEFIGDSVLDYVIVSRLFAVTPPLSHQTMH 1121
Query: 675 DMRSASVNNDCYALSSVKHGLHKH-------------ILHASQ---ELYKWI-------- 710
+++A VN D S++ + + IL S+ L+K++
Sbjct: 1122 LLKTAMVNGDFLGFLSLEQSVSQDEVVIGGDPTGKEPILRHSRFSLPLWKFMRHQSPAIG 1181
Query: 711 --------------NITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDSG 754
+ +DS ER T+ W + K DI ESL GA++VDSG
Sbjct: 1182 LEEVKVSKRYAGLRDQIIDSMER---GQTYPWALLARMQLRKFYSDIFESLLGAVYVDSG 1238
Query: 755 ----CNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAV 810
C + V I L+ ++ L P EL K + V G+
Sbjct: 1239 DLEVCARVVERFGILGYLDRILRDNVHALHPKEELGHLADKESVTYVLDVRQTDEGEKEY 1298
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+V ++ K A++ + LKA
Sbjct: 1299 LCKVLVGTRCVVEVDGGVTRDEVKVKAAEAAVSKLKA 1335
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 585 KVDFVNVPYERQFQV-------QAERLVNVRHLES--LLNYSFRDPSLLVEALTHGSYML 635
KVD V+ Y R F V + E + R L + L + DP+L++ A++ GS
Sbjct: 843 KVDTVSTDYAR-FGVLIPSILHRIETHLVARELSAGLLRPLAISDPALVLTAISTGSAAE 901
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
P Y+R+EFLGD++L + T+ + P L+ + V N +++KHGL
Sbjct: 902 PT---NYERIEFLGDSILKFSTTINVAALNPDWPERLLSFKKDGIVANSTLCKAAIKHGL 958
Query: 696 HKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGC 755
+ IL KW I VD E + + K L DI+E+L GA +D G
Sbjct: 959 DRFILTKPFTGQKWRPIYVDDVLHRGDEKS----TRRISTKTLADIVEALIGASMIDGGL 1014
Query: 756 NKEVVFESI 764
K + SI
Sbjct: 1015 EKALKCMSI 1023
>gi|168177333|pdb|3C4T|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 140/257 (54%), Gaps = 28/257 (10%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E +NY F++ + L++A TH SY I YQRLEFLGDA+LDYLIT +LY S
Sbjct: 18 FEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQHS 77
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FG 727
PG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G
Sbjct: 78 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQG 133
Query: 728 WESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
+SE PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I
Sbjct: 134 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEK 193
Query: 775 ETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKE 831
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 194 FSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYR 247
Query: 832 TAKKVASKEVLKSLKAS 848
AK A++ L+SLKA+
Sbjct: 248 IAKSAAARRALRSLKAN 264
>gi|195443910|ref|XP_002069632.1| GK11626 [Drosophila willistoni]
gi|194165717|gb|EDW80618.1| GK11626 [Drosophila willistoni]
Length = 2281
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 167/368 (45%), Gaps = 78/368 (21%)
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ------- 596
+ + + K++AD VEALIGA+L G L+F+ +GI+V +PY +Q
Sbjct: 1918 LVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRV----LPYTKQTANTLPE 1973
Query: 597 ------------------------------------FQVQAER-----LVNVRHLESLLN 615
F A L E++L
Sbjct: 1974 IESNEQQRIPGSTKPDSKNTTVVYGKWPTPRSPLLPFAPNASDELEHLLSGFEEFEAILG 2033
Query: 616 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD
Sbjct: 2034 YRFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTD 2093
Query: 676 MRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--------- 726
+RSA VNN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2094 LRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHCISEEYYLL 2149
Query: 727 -----GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRL 779
+ PKALGD+ ES++GAIF+DS + +VV+ +++P I ++
Sbjct: 2150 SEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMKPEIEQFSNSVPK 2209
Query: 780 QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + F + +A + VTV+V GT + AK A+
Sbjct: 2210 SPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRIAKCTAA 2264
Query: 839 KEVLKSLK 846
K L+ LK
Sbjct: 2265 KCALRQLK 2272
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1749 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1808
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1809 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1837
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1740 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1796
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1797 LSHLRSKQVAN 1807
>gi|444518375|gb|ELV12129.1| Endoribonuclease Dicer [Tupaia chinensis]
Length = 974
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 142/260 (54%), Gaps = 28/260 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 720 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 779
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 780 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 835
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
G +SE PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I
Sbjct: 836 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 895
Query: 774 PETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADK 830
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 896 KFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSY 949
Query: 831 ETAKKVASKEVLKSLKASFP 850
AK A++ L+SLKA+ P
Sbjct: 950 RIAKSAAARRALRSLKANQP 969
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 348 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 407
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 408 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 435
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 344 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 396
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 397 MRSKKVSN 404
>gi|302502160|ref|XP_003013071.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
gi|291176633|gb|EFE32431.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
Length = 1490
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 198/423 (46%), Gaps = 68/423 (16%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKV 437
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 986 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQL----V 1039
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT +E + + LE LGDS LK AS QL + HEG+LS KKD I+SN+ L
Sbjct: 1040 LTAITATSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1099
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
K D L FI T F W P NS + N KI +K+ +KT+AD
Sbjct: 1100 KAAVDTGLDQFILTTCFTGAKWR-PLYNSTYTD-------NAGKIGEKSTRKLSTKTLAD 1151
Query: 558 VVEALIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYERQFQVQAERLVN 606
VVE+LIG + GGEN L +FL I I++ + + P F R +
Sbjct: 1152 VVESLIGVAIIDGGENKVLRCLELFLPEINWLPSGERIEILYDSAP---DFNDDCPRDI- 1207
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L++YSF +LL +L+H S P YQRLEFLGD++LD ++T L+
Sbjct: 1208 LSKIEPLIDYSFTKKALLAASLSHPSN--PISGMTYQRLEFLGDSILDNIVTRALFRCKK 1265
Query: 667 TLSPGDLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHIL 700
+ D+ +R+A VN D A S+ + L +++
Sbjct: 1266 EIPHQDMHLIRTALVNADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMS 1325
Query: 701 HASQELYKWINITVDSFERLSLE--------STFGWE--SETSFPKALGDIIESLSGAIF 750
H+S ++ + +FE L + + + W S + PK DIIES+ GAIF
Sbjct: 1326 HSSTDIVETQQAMARTFEELRDQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIF 1385
Query: 751 VDS 753
+DS
Sbjct: 1386 IDS 1388
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD+ L ++ L ++P G L+ + + V+N ++V GL + IL
Sbjct: 1054 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1113
Query: 702 ASQELYKW---INIT-VDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
KW N T D+ ++ +ST ++T L D++ESL G +D G NK
Sbjct: 1114 TCFTGAKWRPLYNSTYTDNAGKIGEKSTRKLSTKT-----LADVVESLIGVAIIDGGENK 1168
>gi|146149942|gb|ABQ02405.1| dicer [Schistosoma mansoni]
Length = 2641
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 174/378 (46%), Gaps = 97/378 (25%)
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
PT+ +L+A+T + +LE +ET+GDSFLK+ + L+ TY HEG LS + RI+
Sbjct: 1944 PTT-ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVC 2002
Query: 493 NAALCK-----------LGCDHKL------PGF--------------------------- 508
N+ L + +GC + PG+
Sbjct: 2003 NSNLYRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIWST 2062
Query: 509 --------IRTEPFDPKMWMIPGDN--SGSYELND----HSLFNERKIYVTGRKKVKSKT 554
+R F + + P +N ++ ND H+ + +T ++ + K+
Sbjct: 2063 DTLMDDEVLRNIDFIDENKIKPIENFPISEWDPNDPKVLHAQHLNNQYLITIQQAIPDKS 2122
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGI--------------------KVDFVNVPYE 594
+AD VEALIG +L+T GE L + GI K ++++
Sbjct: 2123 IADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYLDTDEN 2182
Query: 595 RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY------------------MLP 636
R +A + LES LNY+F+DPSLL++A TH SY M
Sbjct: 2183 RANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNLMFS 2242
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
CYQRLEFLGDAVLDY+IT +LY SPG LTD+RSA VNN+ +A +V+ GLH
Sbjct: 2243 TDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLH 2302
Query: 697 KHILHASQELYKWINITV 714
K+ +S +L I++ V
Sbjct: 2303 KYFRASSPQLLHTIDVFV 2320
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEY 788
+ PKAL DI ESL+GAIF+DS + + V++ P+++ I T + P R+L E
Sbjct: 2508 DVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKERIERYTACIPKSPVRQLLEL 2567
Query: 789 -CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ F + + ++G+ +V V G + + AK +A+K L+ L+
Sbjct: 2568 EPEGTKFERARRM---VDGRISVCAHVLGKGRFYG---VGRNYRLAKSLAAKRALRVLR 2620
>gi|322702026|gb|EFY93774.1| Dicer-like protein 1 [Metarhizium acridum CQMa 102]
Length = 1524
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 210/458 (45%), Gaps = 46/458 (10%)
Query: 343 FDQELLLNGRR-IFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTF 401
F Q ++ N + +F A+ L R+ EP + P C II+ P+++ST
Sbjct: 977 FRQSIIWNSEQPVFDAE--LLPLRRNLLCEPDQGDIH-SPRGCFIILEPLAISTLPVDVV 1033
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTKK----CQEGFHLESLE 456
V ++ L + ++ + +D C + ++ I LEA+T + Q + E LE
Sbjct: 1034 VTALA--LPVTIYSIESAAIAMDACGLIDLAIYPPLALEALTKSEEDVDVQSNKNYERLE 1091
Query: 457 TLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP 516
LGD+FLK A + LF N +E V++ +I N L D L ++R+ FD
Sbjct: 1092 FLGDAFLKMATTISLFTLIPNKNEFEYHVERMILICNKNLFNHAVDRGLQEYVRSRGFDR 1151
Query: 517 KMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL 576
+ W +L + + +T R + K++ADV EALIGA T E + L
Sbjct: 1152 RSWYP--------DLVLRKGKKHKPVALTHR--LADKSIADVCEALIGAAYMTEPEGMNL 1201
Query: 577 IFLD----------RIGIKVDFVNVPYERQFQVQAERLVNV---RHLESLLNYSFRDPSL 623
R+ D+ ++ +Q R + V +E + Y FR P L
Sbjct: 1202 AVKAVTKMVQSRNHRMTKYSDYYEGYVQQAWQTIPPRPIEVLAADKVEGSIGYKFRSPKL 1261
Query: 624 LVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L A H SY PE+P YQRLEFLGDA+LD I +L+ +YP P LT+ + A +
Sbjct: 1262 LRSAFKHPSYPYEPELPN-YQRLEFLGDALLDVAIVDFLFRRYPLADPQWLTEHKMAMAS 1320
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG------WESETSFPK 736
N ++ V+ GLH+HIL + I V+ E+ L++ G W + PK
Sbjct: 1321 NHFFSFLCVELGLHRHILSTGSSMMGHIAGFVEQIEKAKLQTEDGVLQLDFWLNTEHPPK 1380
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
AL DI+E++ GA++ DS + + S+R I P
Sbjct: 1381 ALSDILEAVVGAMYEDSKYD----YNSVRDFFTKFIAP 1414
>gi|358380675|gb|EHK18352.1| hypothetical protein TRIVIDRAFT_47151 [Trichoderma virens Gv29-8]
Length = 1386
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 230/489 (47%), Gaps = 52/489 (10%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTKKCQEGFHLESLETLG 459
+PSI+H L +++A L N +L ++N+ + V +AI + E + E +E LG
Sbjct: 893 LIPSIIHELGVMIMAKELANNILRKVGIKNMDL----VRQAICARSASEPVNYERVELLG 948
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LK+ ++ Y ++ EG LS K+DR+ISNA L K + KLP F+ T+PF + W
Sbjct: 949 DSILKFFTCIRVAAEYPDYPEGYLSHKRDRLISNARLHKTALEFKLPRFLNTKPFTGQKW 1008
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
++ E+ L + ++K+ +KT+AD+VEALIG G + + +
Sbjct: 1009 RPLYLDAVLDEVRQEGLEP-----TSQKRKISTKTLADMVEALIGVSYVDGHLDKAVKCI 1063
Query: 580 DRIGIKVDFVNVPYERQF---QVQAERLV--NVRHLESLLNYSFRDPSLLVEALTHGSYM 634
+ ++ +V +R+ +V A+ + + LE L+ YSF+ +LL+EALTH SY
Sbjct: 1064 SLFLPETNWTSVENDRRNIFDKVPADEPLPPTLEPLEGLIGYSFQKKALLIEALTHASYA 1123
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG 694
R +RLEF+GDAVLD +I L+N P L + +++ VN D A +++ G
Sbjct: 1124 AETGKRSLERLEFIGDAVLDNIIVTKLFNVKPELPHFRMHTLKTGLVNGDFIAFMTMERG 1183
Query: 695 LH--KHILH-----ASQEL--YKW-------INITVDSFERLSLESTF------GWESET 732
L + I+ S+E+ Y W ++I ++ E + + E+ T
Sbjct: 1184 LKLTEKIVTEDGTLKSEEMMSYLWTFMRHNSMHIGIEMKETMKRHAALRGEILDEMENGT 1243
Query: 733 SFPKAL----------GDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMITPETMR 778
+P AL D+ E++ GA++VDSG C K ++ ++ +
Sbjct: 1244 HYPWALLAALNPKKFFSDVFEAILGAVWVDSGSMVECEKVATRFGFLKYMDRLLRDKVHV 1303
Query: 779 LQPARELNEYCQKHHFSMK-KTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
P EL ++ + + + + G+ +V +KE K A
Sbjct: 1304 QHPKEELGKWANTETVTYELDMMDNELTGEKEFFCKVLVGKREVVSVRGGINKEEVKTKA 1363
Query: 838 SKEVLKSLK 846
+ E +K L+
Sbjct: 1364 ATEAMKILE 1372
>gi|158706452|sp|A2RAF3.2|DCL1_ASPNC RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1525
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 197/438 (44%), Gaps = 58/438 (13%)
Query: 384 CRIIMGPMSLS-----TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C I + P+ +S T +S P+I+ R+ + L+++ L N T+ L
Sbjct: 998 CFICIEPLKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLAL 1051
Query: 439 EAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 1052 EAFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYH 1111
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + +I N L D ++ +IR+ F W G + DHS RK
Sbjct: 1112 VNRMCLICNKNLFNAAVDKEIYKYIRSRGFSRHTWYPEG--LKLLQGKDHS----RKATT 1165
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL---------------DRIGIKVDFV 589
+ + KT+ADV EALIGA L +GG + +R + F
Sbjct: 1166 ESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFY 1225
Query: 590 NVP-YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
+P Y+R+ AE ++ R +E L+Y FR P+LL A TH SY ++P CYQRLE
Sbjct: 1226 TIPKYQRRAADGAELYLS-RKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQRLE 1283
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
FLGD+++D + L+ ++P P LT+ + A V+N +VK GLH H+ + S L
Sbjct: 1284 FLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPL 1343
Query: 707 YKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV--- 760
I + + ES W PK L D++E+ GA+FVDS N EV+
Sbjct: 1344 QSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFEVIERF 1403
Query: 761 -FESIRPLLEPMITPETM 777
+ I+P E M +T
Sbjct: 1404 FRDYIKPFFEDMAIYDTF 1421
>gi|317037196|ref|XP_001398755.2| dicer-like protein 1 [Aspergillus niger CBS 513.88]
Length = 1493
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 197/438 (44%), Gaps = 58/438 (13%)
Query: 384 CRIIMGPMSLS-----TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C I + P+ +S T +S P+I+ R+ + L+++ L N T+ L
Sbjct: 966 CFICIEPLKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLAL 1019
Query: 439 EAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 1020 EAFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYH 1079
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + +I N L D ++ +IR+ F W G + DHS RK
Sbjct: 1080 VNRMCLICNKNLFNAAVDKEIYKYIRSRGFSRHTWYPEG--LKLLQGKDHS----RKATT 1133
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL---------------DRIGIKVDFV 589
+ + KT+ADV EALIGA L +GG + +R + F
Sbjct: 1134 ESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFY 1193
Query: 590 NVP-YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
+P Y+R+ AE ++ R +E L+Y FR P+LL A TH SY ++P CYQRLE
Sbjct: 1194 TIPKYQRRAADGAELYLS-RKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQRLE 1251
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
FLGD+++D + L+ ++P P LT+ + A V+N +VK GLH H+ + S L
Sbjct: 1252 FLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPL 1311
Query: 707 YKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV--- 760
I + + ES W PK L D++E+ GA+FVDS N EV+
Sbjct: 1312 QSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFEVIERF 1371
Query: 761 -FESIRPLLEPMITPETM 777
+ I+P E M +T
Sbjct: 1372 FRDYIKPFFEDMAIYDTF 1389
>gi|195584278|ref|XP_002081941.1| Dcr-2 [Drosophila simulans]
gi|194193950|gb|EDX07526.1| Dcr-2 [Drosophila simulans]
Length = 1666
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 191/447 (42%), Gaps = 97/447 (21%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1162 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1221
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P + T F P+ +P S G + L D +L +
Sbjct: 1222 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLALDD 1281
Query: 539 ERKI---------------YVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
E + + G + +K +AD +EAL+G + G L+
Sbjct: 1282 EESLVKGNCSDIKYNRFVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFK 1341
Query: 584 IKVDFVNVPYERQFQVQAER---------------LVNVRHLESLLNYSFRDPSLLVEAL 628
I ++ P ++ L+N HLE L Y+F+D L++AL
Sbjct: 1342 ICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQAL 1401
Query: 629 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL 688
TH SY I YQ LEF+GDA+LD+LI+ Y++ ++PG LTD+RSA VNN A
Sbjct: 1402 THPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLAC 1461
Query: 689 SSVKHGLHKHILHASQEL----YKWINIT------VDSFERLSLEST------------- 725
V+H LH IL +++L K++N V ++ + LE
Sbjct: 1462 ICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTNYVHILLEEADVQPTPLDLDDEL 1521
Query: 726 ----------------------FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFES 763
F + PK LGD++E+L AI++D + + +E
Sbjct: 1522 ELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLEALIAAIYLDCR-DLQRTWEV 1580
Query: 764 IRPLLEPMITPET--MRLQPARELNEY 788
I L EP + T M + P R+L E+
Sbjct: 1581 IFRLFEPELQEFTRNMPINPIRQLIEH 1607
>gi|310798327|gb|EFQ33220.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1532
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 221/488 (45%), Gaps = 78/488 (15%)
Query: 382 ELCRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPT 434
++C II+ P+ +ST +FTF P+I+HR+ ++L+A LD C ++ I
Sbjct: 995 KICYIILEPLRVSTLPIETVVMAFTF-PAIIHRIDAVLIA-------LDACKFLDLDIRP 1046
Query: 435 SKVLEAITTKKCQE--------------GFHLESLETLGDSFLKYAASQQLFKTYQNHHE 480
LEA+T G + E LE LGD FLK A + LF +E
Sbjct: 1047 DLALEAVTKDSDNSDEHGKNKINFQGGMGKNYEQLEFLGDCFLKMATTIALFTQNPEDNE 1106
Query: 481 GLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNER 540
V++ +I N L D LP ++R++ FD + W G L +
Sbjct: 1107 FAYHVERMLLICNQNLFNKAVDRSLPEYVRSKSFDRRSWYPSG----------LRLIRGK 1156
Query: 541 KIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKV-----------DF 588
+ + R + K++ADV EALIGA +LS N + + + V D+
Sbjct: 1157 EGSLNHRHALADKSIADVCEALIGAAYLSYAETNNFDMAIRAVTAMVKNKNHLMTSWGDY 1216
Query: 589 VNVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQ 643
+Q + R ++ L Y F+ P+LL A H SY ++P YQ
Sbjct: 1217 YTAYTPSAWQSGHSTAMQKELARQIKENLGYEFKYPALLRSAFKHPSYPRAYEDLPN-YQ 1275
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL--H 701
RLEFLGDA+LD + +L+ K+P P LT+ ++A V+N A V+ GLHKH+L H
Sbjct: 1276 RLEFLGDALLDMVCVDFLFKKFPDADPQWLTEHKTAMVSNQFLACLCVQLGLHKHVLSGH 1335
Query: 702 AS--QELYKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCN 756
AS + ++ + + + + + TF W PK L D++E+ GA+FVDSG +
Sbjct: 1336 ASLLNQTQDFVGVLECAKQDAAADGTFSQCYWIHVKQAPKFLSDVVEAYIGALFVDSGYD 1395
Query: 757 KEVV---FES-IRPLLEPMITPETMRLQ-PARELNEY------CQKHHFSMKKTVAPRI- 804
V F++ IRP M ++ + P L CQ+ M VAP +
Sbjct: 1396 YGQVRGFFDAHIRPFFTDMALYDSFASRHPVTNLTRILQDDLGCQEWRL-MVSEVAPSVE 1454
Query: 805 -NGKAAVT 811
G AA+T
Sbjct: 1455 EGGAAAIT 1462
>gi|402217569|gb|EJT97649.1| ribonuclease III [Dacryopinax sp. DJM-731 SS1]
Length = 1400
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 224/512 (43%), Gaps = 98/512 (19%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
L PELC + +SLS++ + +PS+M R++ +LL +++ + V + L
Sbjct: 808 LMPELC--VKYCLSLSSYRTSMILPSVMARVEEMLLVQECNSVVFHDRLDEVFL-----L 860
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
A+T+ G+ + LE LGDSFLKY +S LF T EG L + + RIISN+AL +
Sbjct: 861 PALTSPSAGAGYDYQRLELLGDSFLKYISSIFLFVTCPQDGEGSLHIHRQRIISNSAL-Q 919
Query: 499 LGCDH--KLPGFIRTEPFDPKMW----------------------------MIPGDNSG- 527
D +LP +I++ P+ W I N G
Sbjct: 920 FHSDRVGQLPQYIQSRQHSPRQWCPPNFLLYHPCMASALDTSEKFIQGMEERIEASNDGP 979
Query: 528 ----------------SYELN-----DHSLFNERKIYVTGRKK----------VKSKTVA 556
S++ N D+S + + + R++ + K+VA
Sbjct: 980 TAGGSPPESGVTKALESHQANAETSPDNSTVSRSPMPYSARERALMREEQHQELGDKSVA 1039
Query: 557 DVVEALIGAFLSTGGENVGLIFLDRIGIKV----------DFVNVPYERQFQVQAERLVN 606
DV EA++GA TG + L +G+ + D ++ + + +
Sbjct: 1040 DVAEAVLGAAWLTGQREMALYVCHILGLPMTRMGSWDFLRDHAHIFFHEELDIGPLSQPK 1099
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
V +E++L + F++P L ALTH S + P CY+RLEF+GDA+LD++ LY ++
Sbjct: 1100 VEAVEAILGHKFKNPFLAATALTHSSMSSTDFP-CYERLEFIGDAILDFVTVRLLYMRWG 1158
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
L G LT ++ A V+N A V GLH +I+H S L + ++ + E
Sbjct: 1159 ELHEGWLTMLKGAIVSNAALAAFCVDLGLHHYIIHDSPHLVETVSSYAKEITKAKEEDLA 1218
Query: 727 GWESETSF----------PKALGDIIESLSGAIFVDSGCNK---EVVFESI-RPLLEPMI 772
+E PK L DI+E+L GAI+V + E VF+ + +P +
Sbjct: 1219 AAAAEDRAPGEYWVTLEPPKVLSDIVEALLGAIYVSDSFDPSGYENVFDRLFKPFFMKRV 1278
Query: 773 TPETMRLQPARELNEYCQK---HHFSMKKTVA 801
+ T+ P L Q+ H F + KT A
Sbjct: 1279 SLNTLSQHPTSLLFALLQQRGCHRFELTKTRA 1310
>gi|327303976|ref|XP_003236680.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
gi|326462022|gb|EGD87475.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
Length = 1460
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 198/421 (47%), Gaps = 64/421 (15%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKV 437
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 956 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQL----V 1009
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT +E + + LE LGDS LK AS QL + HEG+LS KKD I+SN+ L
Sbjct: 1010 LTAITAASAREDINYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1069
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
K D L FI T F W P NS N KI +++ +KT+AD
Sbjct: 1070 KAAVDTGLDQFILTTCFTGAKWR-PLYNSTYTN-------NAGKIGEKSTRELSTKTLAD 1121
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN---------VR 608
VVE+LIGA + GGEN L L+ ++++ +P + ++ + ++ +
Sbjct: 1122 VVESLIGAAIIDGGENKVLHCLELFLPEINW--LPSGERIEILYDSALDFNDDCPRDILS 1179
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+E L+ YSF +LL +L+H S P YQRLEFLGD++LD ++T L+ +
Sbjct: 1180 KVEPLIEYSFTKKALLAASLSHPSN--PISGMTYQRLEFLGDSILDNIVTRALFRCKKEI 1237
Query: 669 SPGDLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHILHA 702
D+ +R+A VN D A S+ + L +++ H+
Sbjct: 1238 PHQDMHLIRTALVNADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMSHS 1297
Query: 703 SQELYKWINITVDSFERLSLE--------STFGWE--SETSFPKALGDIIESLSGAIFVD 752
S ++ + +FE L + + + W S + PK DIIES+ GAIF+D
Sbjct: 1298 STDIVETQQAMARTFEELRGQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIFID 1357
Query: 753 S 753
S
Sbjct: 1358 S 1358
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD+ L ++ L ++P G L+ + + V+N ++V GL + IL
Sbjct: 1024 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1083
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFP-KALGDIIESLSGAIFVDSGCNK 757
KW + ++ + G +S K L D++ESL GA +D G NK
Sbjct: 1084 TCFTGAKWRPLYNSTYTNNA--GKIGEKSTRELSTKTLADVVESLIGAAIIDGGENK 1138
>gi|392566224|gb|EIW59400.1| P-loop containing nucleoside triphosphate hydrolase protein [Trametes
versicolor FP-101664 SS1]
Length = 1508
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 169/681 (24%), Positives = 285/681 (41%), Gaps = 95/681 (13%)
Query: 179 GRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYL 238
G TV + + +++ R++ LF ++ +D RD ++ YL
Sbjct: 776 GEATVFISSAKAAPVHEEEIQRARQYTYRLFNMLYGSRMD-----------RDMMDFAYL 824
Query: 239 LLPASEQSIDWEPVASLSFPCDIGLKHHKNCST--MSNARVVQTKSGPLCTCMIYNSVVC 296
LPA+ S+P + + + T S Q +S + +
Sbjct: 825 FLPAT------------SWPDEGTWEERRRWQTERYSKGLTAQGESPFVANAAAFGERFS 872
Query: 297 TPHSGQIYY-ITGVLGHLNANSLFTRNDGGAITYKKHYEERYG----IQLCFDQELL--L 349
P I + HL L RN+ + ++ + E+Y +Q+ + ++ L
Sbjct: 873 YPKDLAIVRGMNKFDKHLQL--LRWRNEPLSAEEEESFREQYAMYPDLQISYPLMVVQSL 930
Query: 350 NGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRL 409
RR F L + Q P F L P+ + + S +PSI+ L
Sbjct: 931 PRRRNFLIPLTLENADRRIQPPPDDSLFLLHPQYALVELA--SRDEVQYALMLPSILRWL 988
Query: 410 QSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQ 469
+ L L+ L +P +L AIT QE H + LETLGD+ LK+ +S
Sbjct: 989 ANALTVDALRTNLF-RTTSVAGVPLPLLLTAITAPIAQELSHYQRLETLGDTVLKFTSSN 1047
Query: 470 QLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSY 529
QL+ + HEG LS KKD ++N++L K L +I + F P+ W +S
Sbjct: 1048 QLYAEFPLWHEGYLSRKKDHAVANSSLAKEAVKKGLYQWIIRDRFVPRKWKPHCASSTQG 1107
Query: 530 ELNDHSLFNERKIYVTGR------------KKVKSKTVADVVEALIGAFLSTGGENVGLI 577
L++ E V + +++ +K +ADVVE+LIGA GG ++ +
Sbjct: 1108 PLDELVEEKEEVKEVDAKVGKDGKPKKKKAEELSTKMLADVVESLIGAAYEHGGFDLAID 1167
Query: 578 FLDRIGIKVDFVNVPYERQFQVQAERLVNVRH----LESLLNYSFRDPSLLVEALTHGSY 633
+ R G+ + + + + + E LV++ +E +LNY F+ + LV+ALTH SY
Sbjct: 1168 CVARFGLGISWKKLSERIKEMHEVEDLVDLPDQLALVEQMLNYQFKRRTFLVQALTHASY 1227
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYPTLSPGDLTDMRSASVNNDCYAL---- 688
+RLEFLGD+ LD ++T YLY+ + SPG + + A+VN+ A
Sbjct: 1228 QGDSAVMSLERLEFLGDSALDMVVTDYLYHAEGKNYSPGYMHIKKEAAVNSHILAYVCLS 1287
Query: 689 ----------------------SSVKHGLHKHILHASQELYKWINITVDSFER------- 719
S K L + +LH+S + + N+T FE+
Sbjct: 1288 TSVTVESVMPTWTLGGGLATTDDSQKVHLWQCLLHSSHRVLEDQNLTFARFEKHGPAIAQ 1347
Query: 720 -LSLESTFGWESETSF--PKALGDIIESLSGAIFVDSGCNKEVVFESIRPL-----LEPM 771
L + + W + TS PK + D++ES+ GA++VDS + + V +R L +E +
Sbjct: 1348 ALREDRIYPWAALTSLQAPKFISDMVESILGAVYVDSMGSLDAVRGVMRSLGLMQVIERV 1407
Query: 772 ITPETMRLQPARELNEYCQKH 792
+ + L P L + K
Sbjct: 1408 VIEDVDVLHPVSRLAIWAAKQ 1428
>gi|302661784|ref|XP_003022555.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
gi|291186507|gb|EFE41937.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
Length = 1468
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 197/423 (46%), Gaps = 68/423 (16%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKV 437
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 964 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQL----V 1017
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT +E + + LE LGDS LK AS QL + HEG+LS KKD I+SN+ L
Sbjct: 1018 LTAITATSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1077
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
K D L FI T F W P NS N KI +K+ +KT+AD
Sbjct: 1078 KAAVDTGLDQFILTTCFTGAKWR-PLYNSTYTN-------NAGKIGEKSTRKLSTKTLAD 1129
Query: 558 VVEALIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYERQFQVQAERLVN 606
VVE+LIG + GGEN L +FL I I++ + + P F R +
Sbjct: 1130 VVESLIGVAIIDGGENKVLRCLELFLPEINWLPSGERIEILYDSAP---DFNDDCPRDI- 1185
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L++YSF +LL +L+H S P YQRLEFLGD++LD ++T L+
Sbjct: 1186 LSKIEPLIDYSFTKKALLAASLSHPSN--PISGMTYQRLEFLGDSILDNIVTRALFRCKR 1243
Query: 667 TLSPGDLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHIL 700
+ D+ +R+A VN D A S+ + L +++
Sbjct: 1244 EIPHQDMHLIRTALVNADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMS 1303
Query: 701 HASQELYKWINITVDSFERLSLE--------STFGWE--SETSFPKALGDIIESLSGAIF 750
H+S ++ + +FE L + + + W S + PK DIIES+ GAIF
Sbjct: 1304 HSSTDIVETQQAMARTFEELRDQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIF 1363
Query: 751 VDS 753
+DS
Sbjct: 1364 IDS 1366
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD+ L ++ L ++P G L+ + + V+N ++V GL + IL
Sbjct: 1032 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1091
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFP-KALGDIIESLSGAIFVDSGCNK 757
KW + ++ + G +S K L D++ESL G +D G NK
Sbjct: 1092 TCFTGAKWRPLYNSTYTNNA--GKIGEKSTRKLSTKTLADVVESLIGVAIIDGGENK 1146
>gi|281339672|gb|EFB15256.1| hypothetical protein PANDA_009266 [Ailuropoda melanoleuca]
Length = 1917
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 168/374 (44%), Gaps = 90/374 (24%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1556 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSSQ 1615
Query: 601 AERLVNVR----------------------------------------------HLESLL 614
+ L R + E +
Sbjct: 1616 QKNLSGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1675
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1676 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1735
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A + + + H +D F + LE G +SE
Sbjct: 1736 DLRSALVNNTIFASLAYFKAVSPELFH-----------VIDDFVQFQLEKNEMQGMDSEL 1784
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1785 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1844
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1845 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1898
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1899 AARRALRSLKANQP 1912
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1386
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1295 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1347
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1348 MRSKKVSN 1355
>gi|339242189|ref|XP_003377020.1| putative ribosomal protein S7e [Trichinella spiralis]
gi|316974223|gb|EFV57735.1| putative ribosomal protein S7e [Trichinella spiralis]
Length = 2029
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 182/389 (46%), Gaps = 65/389 (16%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
VL A+T +K Q+ F LES+E LGDSFLK+ S +F N +EG L+ + I+SN L
Sbjct: 1543 VLRALTLRKAQDMFDLESMEALGDSFLKFIVSLHVFIKETNWNEGRLTSLRSEIVSNTNL 1602
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIP------GDNSGSYELN------DHSLFNE---- 539
LG L + PFDP W+ P SG +N D NE
Sbjct: 1603 FNLGKQKLLQAKLTAVPFDPTAQWLPPCFRSLAALESGYESVNELIDEGDSKKKNEALKA 1662
Query: 540 ---RKIYVTGRKKVKS----------KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 586
+ V R ++ S K++AD VEAL+G +L G + L GI +
Sbjct: 1663 NTPTPVVVAERYEMCSLNRTHQVIYDKSIADCVEALVGCYLLEAGMRPAIKLLKWFGIDI 1722
Query: 587 D--FVNV------------------------PYERQFQVQAERLVNVRHLESLLNYSFRD 620
D +N+ P + + +N E+ + Y F +
Sbjct: 1723 DGNLMNLLSSSSSSSSSSSTAFCSENCVLIGPEAKIHSIWTAYDLN--SFEAKIGYRFTN 1780
Query: 621 PSLLVEALTHGSYMLPEIP--RCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
+ L++ALTH SY E P Y+RLEFLGDA+LDYLI+ +LY+ SPG L+D+R+
Sbjct: 1781 KAYLIQALTHSSYNEVETPVTDSYERLEFLGDAILDYLISRHLYSSKRIRSPGLLSDLRA 1840
Query: 679 ASVNNDCYALSSVKHGLHKHILHASQELYKWINI-----TVDSFERLSLESTFGWESETS 733
A VNN ++ +++ + A + L + +N ++ + + T +
Sbjct: 1841 ALVNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMMEEEQDDDEKETSEFAEHVE 1900
Query: 734 FPKALGDIIESLSGAIFVDSGCNKEVVFE 762
PK LGDI ES++GAIF+DS C+ V++
Sbjct: 1901 VPKPLGDIFESVAGAIFLDSHCSLATVWQ 1929
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 14/119 (11%)
Query: 31 RYFKPTPKFDI----NKEMGI---CTLYLPNNCPIQTVIA---QGNIKTLKQTACLEACK 80
R+ +PKF + NK++ I T+ LP P++ I N K + A E K
Sbjct: 960 RFADSSPKFSVQTILNKDLSISYVATVQLPTTSPLKKKIEGKPMQNAKLAEMAAAFETAK 1019
Query: 81 KLHQIGALTDNLLPDVVVEEHDAQKHGNEPYDAEHPIYF----PPELVNQCPQDTKITY 135
LH +G L + L+P V V + K + + Y+ P L P+ + +Y
Sbjct: 1020 MLHAMGELNEFLIPPVTVRKEIELKEDEQFFSISSRSYYLKEVPDALYKAIPRADQKSY 1078
>gi|170033786|ref|XP_001844757.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
gi|167874834|gb|EDS38217.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
Length = 2270
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 169/354 (47%), Gaps = 66/354 (18%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY-ERQFQVQAERL---- 604
+ K+VAD VEALIGA+L G L+ + +GI+V +P E+ F A R+
Sbjct: 1917 IPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRV----LPVCEQPFDPTAPRIPGSS 1972
Query: 605 ----VNVRHLESL-----------------------------------LNYSFRDPSLLV 625
VN + ++S+ L Y F+D S L+
Sbjct: 1973 APYEVNGKQIQSIYGYWIPPRSPLLTHAPNPEKSLEHLLDGYSAFEDSLGYRFQDRSYLL 2032
Query: 626 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDC 685
+A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN
Sbjct: 2033 QAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTI 2092
Query: 686 YALSSVKHGLHKHILHASQELY----KWINITVDSFERLSLESTFGWESE------TSFP 735
+A +V+H HK+ H S L +++ I D+ +S E E E P
Sbjct: 2093 FASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHSISEEYYLISEDECDEAEDVEVP 2152
Query: 736 KALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKH 792
KALGD+ ES++GAIF+DS + + V+ R ++ P I ++ P REL E +
Sbjct: 2153 KALGDVFESVAGAIFLDSNMSLDAVWRVYRGMMGPEIEQFSNSVPKSPIRELLELEPETA 2212
Query: 793 HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
F + +A + VTVEV GT + AK A+K L+ LK
Sbjct: 2213 KFGKPEKLAD--GRRVRVTVEVFGKGTF---RGIGRNYRIAKCTAAKCALRQLK 2261
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + +SN
Sbjct: 1732 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVSNL 1791
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1792 NLYRLGRRKVLGESMIATKFEPHDNWLPP 1820
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N+ PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1723 LTNHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGK 1779
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1780 LSHLRSKQVSN 1790
>gi|393246694|gb|EJD54202.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1453
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 233/533 (43%), Gaps = 79/533 (14%)
Query: 379 LPPELCRI-IMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV 437
L P+ CR+ I+ P + F+PSI+ +QS +L +L L + +V +P V
Sbjct: 920 LLPQFCRVDILAP---AMARLSMFLPSILRDMQSAILGRDLHRHLFTTGLLSV-VPLLDV 975
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
AITT + ++ + +ETLGD LK+ S QL + HEG L++KKD I+SN+ L
Sbjct: 976 RTAITTPLTGDAYNYQRVETLGDCVLKFLTSVQLLDMHPEWHEGYLTMKKDHIVSNSNLA 1035
Query: 498 KLGCDHKLPGFIRTEPFDPKMWM---IPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
+ +KL +I + K W + S +++ + K ++ +K
Sbjct: 1036 REAKRNKLALWIIRDRMVAKKWQPQYLTALPDTSMDVDPPTEDPPAKEKDENVPRLSTKV 1095
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---LVN----- 606
+ADVVE+LIG GG + + L R+GI E +++ A+R +VN
Sbjct: 1096 LADVVESLIGVAHENGGYDAAVDMLRRLGIGQSM-----ELEWKTVADRVHSIVNRIEPL 1150
Query: 607 --------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
VR LE +L + F PSLL EALTH +Y Y+RLEFLGD++LD ++T
Sbjct: 1151 PHGYPEDYVRTLEQMLGHRFEHPSLLFEALTHANYTGDVHTVSYERLEFLGDSLLDNVVT 1210
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNND-----CYALSSVKHGLHKHILHASQELYKWI--- 710
+Y+ L P +T R A+VN + C LS+ + + E ++
Sbjct: 1211 EQVYHSPRRLPPVLMTRCRIATVNTEMLAYCCANLSTEQQHMTVQRAPDRPEGATFVPTS 1270
Query: 711 -NITVDSF---------------------------ERLSLESTFGWES--ETSFPKALGD 740
+ + +F ER + F W E PK LGD
Sbjct: 1271 RTVRLPTFIRMSNVAMVGVVRDYIAGYERVHERIAERFAHGREFPWTDLFELRAPKFLGD 1330
Query: 741 IIESLSGAIFVDSGCNKEVVFE-----SIRPLLEPMITPETMRLQPARELNEYCQKHHFS 795
I+ESL AI++D+ + V I P+L +I P L EY K
Sbjct: 1331 IVESLIAAIYLDTRGSMAAVERFIERLGILPVLRHLIDDRVDVRHPLTVLGEYAAKSQGK 1390
Query: 796 MKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
+K + + A ++ ++ N L D +++ +KE LK A+
Sbjct: 1391 LKYVFS--VQDGATLSCGIYLNEQLIVSMQGD-----NRELRAKEELKVRAAA 1436
>gi|390332898|ref|XP_790894.2| PREDICTED: endoribonuclease Dicer-like [Strongylocentrotus
purpuratus]
Length = 1815
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 174/350 (49%), Gaps = 58/350 (16%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVNV 591
+ K++AD VEALIG +L + G L+ + +G+ V ++
Sbjct: 1468 MSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGLDVLPTIDGQSNKRNDQSSDLPAADL 1527
Query: 592 P------YERQFQ------------VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 633
P Y +Q + V +LV E +NY FRD + L++A TH SY
Sbjct: 1528 PVSCLYGYLKQPESPLLRSVPNAEDVLQHQLVGYDGFEKTINYRFRDRAYLLQAFTHSSY 1587
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
I CYQRLEFLGDA+LDYLIT +LY+ + LSPG LTD+RSA VNN +A +VK
Sbjct: 1588 HRNSITDCYQRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKF 1647
Query: 694 GLHKHILHASQELYKWIN---ITVDS-FERLSLESTFGW--------ESE-TSFPKALGD 740
HK+ + +++ I+ VD+ E L ++S + ESE PKALGD
Sbjct: 1648 NFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEVPKALGD 1707
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMK 797
I ES++GAI++DSG + V++ P+++ I + + P REL E + F
Sbjct: 1708 IFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYASDLPISPVRELLEMEPETARFGPP 1767
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+ I+GK VTV V G FK + AK A++ L+ LK+
Sbjct: 1768 EKT---IDGKTRVTVNVVGKGQ-FKGIGRNY--HIAKATAARFALRHLKS 1811
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+++T +GF+LE LE LGDSFLK A + L+ TY + EG LS + + +SN L
Sbjct: 1258 ILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSNFNL 1317
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIP 522
LG L ++ FDP + W+ P
Sbjct: 1318 YCLGDKKALAHKMQVSLFDPSINWLPP 1344
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 172/439 (39%), Gaps = 80/439 (18%)
Query: 38 KFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLK---QTACLEACKKLHQIGALTDNLLP 94
K D++ E TL LP N PI+ I +K K ++A LH+ G L D L P
Sbjct: 696 KGDVSPEFQ-ATLQLPINSPIRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQP 754
Query: 95 ----DVVVEEHDAQKH-----GNEPYDAEHPIYFPPELVNQCPQD--TKITYHCYLIELK 143
++ +A H P + Y+ E V +C Q+ + CYL +
Sbjct: 755 MGKESILKATDNAFNHLFADGQTRPGTTKKRQYYDKE-VAKCLQECLPQADQPCYLYSVD 813
Query: 144 QNFNYDIPAHDIVLAVRTE---------------LESEIKKV-NFDLEVDRGRLTVNLK- 186
+ +P +L +R +I KV F + G L V++
Sbjct: 814 MSLASPLPD---ILNIRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSIML 870
Query: 187 HLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASE-- 244
+I+L+ ++ + F +F ++ LDK N L + + +YL++P E
Sbjct: 871 ESDEIRLSSSQIRRAQSFHGCMFSEVL--RLDKPNLELNP----EKSQANYLIVPLKEGP 924
Query: 245 -------QSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCT 297
IDW + +S + H + + + Q + T ++ ++VV T
Sbjct: 925 AGPSGGPSVIDWSFLEKVS----LSSGHLDQPTQLPDYSQSQFE---FSTDILADAVV-T 976
Query: 298 P-----HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLC-FDQEL---- 347
P Q Y++ +L L S F T+ +Y ERY IQ+ F Q L
Sbjct: 977 PIYRNIDQPQRYFMADILYDLPVTSPFPSEKYE--TFVDYYFERYDIQISNFQQPLVDVD 1034
Query: 348 -------LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFT 400
LL R + H L + ++ + L PELC I P+ S +
Sbjct: 1035 CMSSRLNLLTPRYLNHKGKALPISTGQNKKGNLQKKQYLVPELCYIY--PIPASLWRKAV 1092
Query: 401 FVPSIMHRLQSLLLAVNLK 419
+PSI++RL +LL+A L+
Sbjct: 1093 CLPSILYRLNALLIAEELR 1111
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN-DCYALSSVKHGLHK 697
+RLE LGD+ L +T YLY YP L G L+ +RS V+N + Y L K HK
Sbjct: 1274 ERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSNFNLYCLGDKKALAHK 1329
>gi|242809985|ref|XP_002485488.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
gi|218716113|gb|EED15535.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
Length = 1420
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 217/519 (41%), Gaps = 82/519 (15%)
Query: 359 NYLSKCRQEKQREPSKISFELPP-ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVN 417
++L + Q +Q + S +L P LC I P S F F+PSI H+++ L +A
Sbjct: 886 DFLHQIAQSEQLPLAHTSQQLEPVRLCHIDRLPAKFSKFA--LFIPSITHKIEVLFIAER 943
Query: 418 LKNMLLDHC-MQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
L +L +N+ S VL AI+ QE + E LGDS LK S L
Sbjct: 944 LARTVLSRVKFENL----SHVLTAISASSAQEEHDYQRYEFLGDSLLKLITSIHLVVKKP 999
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
HEGLLS +KD I+SN L + D L FI T+ F + W +
Sbjct: 1000 LWHEGLLSAEKDTIVSNGRLHRTALDLGLDKFILTKSFTGRKWR-------------PNY 1046
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG----ENVGLIFLDR---IGIKVDFV 589
++ + ++++ +KT+ADVVEAL+GA GG E+ IFL I D
Sbjct: 1047 ISQFETVTEEKRQMSTKTLADVVEALLGAAFLDGGYEKLESCAKIFLPEQTWTSISDDMR 1106
Query: 590 NVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTH--GSYMLPEIPRCYQRLEF 647
+ QA + +E +L Y F PS+L EALTH + P YQRLEF
Sbjct: 1107 TLYEVALVSNQASSHPKLGQMEEILGYKFNKPSILFEALTHPCANDGAP----TYQRLEF 1162
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN------------------------- 682
LGD++LD+ + +N +S D+ MR+A VN
Sbjct: 1163 LGDSLLDHFVVQEFFNHPEKISHQDMHLMRTAVVNAHFLGFLCQSLYITEERSEPVSPGK 1222
Query: 683 ---------NDCYALSSVKHGLHKHILHASQELY----KWINITVDSFERLSLESTFGWE 729
+ Y ++HG I +A QE W D+ L + + W
Sbjct: 1223 AHISTISTEHKIYLWQLMRHGASWEITNAQQETKARYEAWGPAVHDA---LMHSNKYPWA 1279
Query: 730 S--ETSFPKALGDIIESLSGAIFVDSGCNKEVVFE-----SIRPLLEPMITPETMRLQPA 782
+ K D++ESL GAIFVDS + + + S+ P L +I E + L P
Sbjct: 1280 DLFRINASKFFSDMVESLLGAIFVDSKGSLDASRQFLERISLLPCLRRIIREEVLILHPF 1339
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLF 821
+L+E + +V R+ V +G +F
Sbjct: 1340 NQLHEAAISDKVQISHSVEKRLPTSPGFEDVVREDGLVF 1378
>gi|296417821|ref|XP_002838549.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634492|emb|CAZ82740.1| unnamed protein product [Tuber melanosporum]
Length = 1490
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 220/441 (49%), Gaps = 68/441 (15%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
L PELC + + P S F ++P I+ R++ +A +L+ LL H + +IP K++
Sbjct: 884 LIPELCTVDVVPWKYSQFA--MYLPGIIRRIEMSFIAADLERTLL-HPVGFNSIP--KMV 938
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
A++ +E + E LGDS LK+ S L + HEG L+ KK+++++N+ L +
Sbjct: 939 TALSASSARESTDYQRFEFLGDSVLKFLTSVNLLDEHPFWHEGYLTRKKEQMVANSRLAR 998
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
D++L +I T+ F W Y +++ F E+K G K++ +K +ADV
Sbjct: 999 AAIDNRLAKWIITDIFTGSKW------RPRYVISEEEEFPEKK--RKGPKQLSTKILADV 1050
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQV--QAER-----LVNVRHLE 611
VEALIGA G L + G+ +++ ++ ER + +A R L +++ LE
Sbjct: 1051 VEALIGAAYLEGNYPKALKVIRAFGLNINWKSLE-ERTTSLLNRASRYPEVHLSHLKGLE 1109
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
SL+ Y F +LL+EA+TH S+ YQR+EFLGDA+LD ++ +L+ LS
Sbjct: 1110 SLIGYHFTHKALLLEAITHPSWESDMTSLSYQRMEFLGDALLDMVVVNHLFFSPRNLSHI 1169
Query: 672 DLTDMRSASVNND--------C------YALSSVKHGLHKHILHASQ--ELYKWI----- 710
D+ +S+ VN + C Y +S I++ S+ EL+K+I
Sbjct: 1170 DMHLYKSSVVNGNFLAYLSLRCAVDAKYYGISQRAQSTEVEIVNKSRKVELWKFIRHQHQ 1229
Query: 711 ------NITVDSFE---RLSLEST------FGW------ESETSFP-KALGDIIESLSGA 748
I +E R S+++ + W ES+ S K L D++E++ GA
Sbjct: 1230 QIQHAQKICSKRYEEDLRDSVQAALDYGKDYPWTELSPLESDKSGRNKFLSDVVEAIIGA 1289
Query: 749 IFVDSGCNKEVVFESIRPLLE 769
+F+DSG + FE+++ L E
Sbjct: 1290 VFIDSGGD----FETVQSLAE 1306
>gi|283131646|dbj|BAI63215.1| Dicer [Hemicentrotus pulcherrimus]
Length = 1816
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 175/350 (50%), Gaps = 58/350 (16%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVNV 591
+ K++AD VEALIG +L + G L+ + +G+ V ++
Sbjct: 1469 MSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGLDVLPAINDQSKKRNDQSSDLPAADL 1528
Query: 592 P------YERQFQ------------VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 633
P Y +Q + V ++LV E +NY F+D + L++A TH SY
Sbjct: 1529 PVSCLYGYLKQPESPLLRSVPNAEDVLQQQLVGYDGFEKTINYRFKDRAYLLQAFTHSSY 1588
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
I CYQRLEFLGDA+LDYLIT +LY+ + LSPG LTD+RSA VNN +A +VK
Sbjct: 1589 HRNSITDCYQRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKF 1648
Query: 694 GLHKHILHASQELYKWIN---ITVDS-FERLSLESTFGW--------ESE-TSFPKALGD 740
HK+ + +++ I+ VD+ E L ++S + ESE PKALGD
Sbjct: 1649 NFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEVPKALGD 1708
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMK 797
I ES++GAI++DSG + V++ P+++ I + + P REL E + F
Sbjct: 1709 IFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYASDLPISPVRELLEMEPETARFGPP 1768
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+ I+GK VTV V G FK + AK A++ L+ LK+
Sbjct: 1769 EKT---IDGKTRVTVNVVGKGQ-FKGIGRNY--HIAKATAARFALRHLKS 1812
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+++T +GF+LE LE LGDSFLK A + L+ TY + EG LS + + +SN L
Sbjct: 1259 ILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSNFNL 1318
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIP 522
LG L ++ FDP + W+ P
Sbjct: 1319 YCLGEKKALAHKMQVSLFDPSINWLPP 1345
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN-DCYALSSVKHGLHK 697
+RLE LGD+ L +T YLY YP L G L+ +RS V+N + Y L K HK
Sbjct: 1275 ERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSNFNLYCLGEKKALAHK 1330
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 171/440 (38%), Gaps = 81/440 (18%)
Query: 38 KFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLK---QTACLEACKKLHQIGALTDNLLP 94
K D++ E TL LP N P++ I +K K ++A LH+ G L D L P
Sbjct: 697 KGDVSPEFQ-ATLQLPINSPLRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQP 755
Query: 95 ----DVVVEEHDAQKH-----GNEPYDAEHPIYFPPELVNQCPQD--TKITYHCYLIELK 143
++ +A H P + Y+ E V +C Q + CYL +
Sbjct: 756 MGKESILKATDNAFNHLFADGQTRPGTTKKRRYYDKE-VAKCLQGCLPQADQPCYLYSVD 814
Query: 144 QNFNYDIPAHDIVLAVRTE---------------LESEIKKV-NFDLEVDRGRLTVNLK- 186
+ +P +L +R +I KV F + G L V++
Sbjct: 815 MSLASPLPD---ILNIRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSITL 871
Query: 187 HLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASE-- 244
+I+L+ ++ + F +F ++ LDK N L + + +YL++P E
Sbjct: 872 ESNEIRLSGAQIRRAQSFHGCMFSEVL--RLDKPNLELNP----EKSQANYLIVPLKEGP 925
Query: 245 --------QSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVC 296
IDW + +S + H + + + Q + T ++ ++VV
Sbjct: 926 ARGPSGGPSVIDWSFLEKVS----LSSGHLDQPTQLPDYSQSQFE---FSTDILADAVV- 977
Query: 297 TP-----HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLC-FDQEL--- 347
TP Q Y++ +L L S F T+ +Y ERY IQ+ F Q L
Sbjct: 978 TPIYRNIDQPQRYFMADILYDLPVTSPFPSEKYE--TFVDYYFERYDIQISNFQQPLVDV 1035
Query: 348 --------LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSF 399
LL R + H L + ++ + L PELC I P+ S +
Sbjct: 1036 DCMSSRLNLLTPRYLNHKGKALPISTGQNKKGNLQKKQYLVPELCYIY--PIPASLWRKA 1093
Query: 400 TFVPSIMHRLQSLLLAVNLK 419
+PSI++RL +LL+A L+
Sbjct: 1094 VCLPSILYRLNALLIAEELR 1113
>gi|310794641|gb|EFQ30102.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1447
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 223/503 (44%), Gaps = 78/503 (15%)
Query: 359 NYLSKCRQEKQREPSK---ISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA 415
++L + + E + PS S P ++ P + F +PSI+H +++ L+A
Sbjct: 899 DFLHRPQSEPGQSPSSSKPYSRVYPMPWAKVDTIPAKYAQF--GVLIPSILHHIETRLVA 956
Query: 416 VNLK-NMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKT 474
L +L + ++++ +L AI+T E + E +E LGDS LK++A+ +
Sbjct: 957 RELSLGLLRPLAISDLSL----ILTAISTGSASEPTNYERIEFLGDSILKFSATINVAAL 1012
Query: 475 YQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDH 534
E LLS KD I+SN+ LCK H L +I T+PF + W +S D
Sbjct: 1013 NPQWPERLLSFHKDAIVSNSTLCKAAVKHGLDRYILTKPFTGQKWRPIYVDSVLSRGEDK 1072
Query: 535 SLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL----IFLDRIGIK-VDFV 589
S+ +K+ +KT+AD+VEALIGA + GG + L IFL +I + +D
Sbjct: 1073 SM-----------RKMSTKTLADIVEALIGASMIDGGLDKALKCMSIFLQQINWRTLDAC 1121
Query: 590 NVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
+ E + LE L+ Y F +LL++A+TH S+ L C +RLEF+G
Sbjct: 1122 RLALYNFSPPDVELPSTLEPLEHLIGYKFDRKTLLIQAMTHASFNLGNPFGCLERLEFMG 1181
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-------------GLH 696
D+VLDY++ L+ P L + +++A VN D S++ G
Sbjct: 1182 DSVLDYVVVNRLFAVEPPLPHQTMHLLKTAMVNGDFLGFLSLEQSIGQDEVVLGENTGKE 1241
Query: 697 KHILHASQELYKW--------------INI----------TVDSFERLSLESTFGWE--S 730
++ H+ L W IN+ +DS ER T+ W +
Sbjct: 1242 PNLQHSRFSLPLWKFMRHQSPAIGLEQINVHKRYTALRDQIIDSMER---GKTYPWALLA 1298
Query: 731 ETSFPKALGDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMITPETMRLQPARELN 786
K DI ESL GA++VDSG C + V I L+ ++ L P EL
Sbjct: 1299 RIQLRKFYSDIFESLLGAVYVDSGDLGVCARVVERFGITGYLDRILRDGVHVLHPKEELG 1358
Query: 787 EYCQKHHFSMKKTVAPRINGKAA 809
H + K+ V +N + A
Sbjct: 1359 ------HLADKEKVTYVLNARQA 1375
>gi|158706522|sp|Q4WVE3.3|DCL1_ASPFU RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1537
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 230/531 (43%), Gaps = 82/531 (15%)
Query: 371 EPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 430
EP +IS LPP + +ST +F P+I+ RL S L+A+ + L +
Sbjct: 1013 EPLRIS-ALPPSI---------VSTCLAF---PAIISRLDSYLIALEACDEL------EL 1053
Query: 431 TIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQ 476
I LEA T + +E G + E LE LGD FLK A S LF
Sbjct: 1054 VIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNP 1113
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
N E V + +I N L ++ +IR+ F +W D DHS
Sbjct: 1114 NDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWY--PDGLTLLHGKDHST 1171
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG--------ENVGLIFLD----RIGI 584
K+ G+ + KT+ADV EALIGA L +GG +D R+
Sbjct: 1172 ----KLLSEGKHALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSC 1227
Query: 585 KVDFVNVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YML 635
+++ + ++Q + R RH+E L Y F P LL A+TH S Y +
Sbjct: 1228 WKEYITLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRV 1287
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
P CYQRLEFLGD++LD + L+ ++P P L++ + A V+N SVK G
Sbjct: 1288 P----CYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGF 1343
Query: 696 HKHILHASQELYKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVD 752
H+ I+ S L I V+ E ES W PK L D++E+ GAIFVD
Sbjct: 1344 HRRIMAFSNPLQAQITHYVEEIETAQAESQGAVDYWVVAKDPPKCLPDMVEAYLGAIFVD 1403
Query: 753 SGCNKEVV---FE-SIRPLLEPMITPETM-RLQPAREL-----NEY-CQKHHFSMKKTVA 801
S + +V+ FE I+P E M +T P L NEY C ++ +K
Sbjct: 1404 SKFDFQVIEAFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCT--NYCLKAGEL 1461
Query: 802 PRINGK-AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
P I+G A V V +G + + + + AK AS++ L L P
Sbjct: 1462 PTIDGAPATVLAAVIVHGNVISEARSSSSR-YAKITASEKALAVLDGLLPS 1511
>gi|390603552|gb|EIN12944.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1524
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 203/453 (44%), Gaps = 58/453 (12%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSI+ RL + A +L+ ML + +IP + AIT E + + LETLGD
Sbjct: 980 LLPSILRRLTVTMTAASLREMLF-LSPRLRSIPLDLLTAAITAPVSGEIRNYQRLETLGD 1038
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
+ LK+ AS L Y HEG LS KKD ++N L K+ +L ++ + F K W
Sbjct: 1039 TALKFMASISLLTDYPLWHEGYLSKKKDHAVANVRLAKIALSKELYRWMIRDRFIVKKWR 1098
Query: 521 IPGDNSGSYELNDHSLFNERKIYVT-----GRKKVKSKTVADVVEALIGAFLSTGGENVG 575
P D E ++ G+ ++ K +AD+VEA+IGA G ++
Sbjct: 1099 -PKLAEWQKSSGDEKKMPESEVDTNAEKGRGQPQLSMKMLADIVEAIIGAAYLHGSFDLA 1157
Query: 576 LIFLDRIGIKVDFVNVP--YERQFQVQAERLVNVRHL-------ESLLNYSFRDPSLLVE 626
+ I +D P ER + ++R + E +L YSF + LLVE
Sbjct: 1158 VEVTRLFDIGIDIKTPPTCIERILVRAQASVDDLREIPSQIDVVERMLGYSFNNKVLLVE 1217
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY-PTLSPGDLTDMRSASVNND- 684
ALTH S E Y+R+EFLGDAVLD ++T YLY + PG + + A VN
Sbjct: 1218 ALTHASLQGTEGTISYERMEFLGDAVLDMVVTDYLYRRSDKNYGPGHMHLRKQAVVNMHF 1277
Query: 685 ----CYALSSVKHGL--------HKHILHASQELYKW----------INITVDSFER--- 719
C+ +S+ + I ++SQ +Y W ++ ++F R
Sbjct: 1278 LAYVCFGISTELEAAMGSSDGVGNTSIRNSSQRVYLWQCLLHSSHRILDDQSNAFTRYQR 1337
Query: 720 --------LSLESTFGWESETSF--PKALGDIIESLSGAIFVDSGCNKEVVFESIR---- 765
++ F W + T PKAL D++ES GA+F+DSG + EV+ +R
Sbjct: 1338 NRKAFDRAFQHDTLFPWTALTQLQAPKALSDVVESTIGAVFLDSGGSFEVIQNLLRRYRI 1397
Query: 766 -PLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
P LE ++ + P L+ + K +K
Sbjct: 1398 LPTLERIVDCDVDVQHPVSRLSIWAAKEKKKVK 1430
>gi|400598379|gb|EJP66096.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1402
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 202/459 (44%), Gaps = 71/459 (15%)
Query: 386 IIMGPMSLSTFYSF--------TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV 437
I + P+S +T S +PSI+H ++++L+A +L LL S V
Sbjct: 891 ITVLPVSFATVDSIHIKHARFGMLIPSIIHTIETMLIARHLSVTLLKPLE---LTDYSLV 947
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
+AI+ + E + E LE LGDS LK+ AS Q T + EG L+ KDR+++N+ L
Sbjct: 948 RDAISARSAYEPTNYERLEFLGDSILKFCASMQAGATNLSWPEGYLTRYKDRLVANSRLS 1007
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNER----KIYVTGRKKVKSK 553
+ + L FI T PF + W H F E K+ ++++ +K
Sbjct: 1008 RAAVETGLAKFILTVPFTAQKW--------------HPFFLETILSGKMKPFKKREMSTK 1053
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ--FQVQAERLVNVRHL- 610
+ADVVEAL+G GG + L + D+++ R+ F V+ +L
Sbjct: 1054 VLADVVEALVGVAYIAGGIPKAIQCLSIFINECDWIDPSECREEFFACAPSHCVDSSYLH 1113
Query: 611 --ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
E L+ YSF SLL+EA TH SY+ R ++RLEFLGDAVLDY+I L N+ P L
Sbjct: 1114 ILEELIGYSFTKKSLLLEATTHASYIGDISGRSWERLEFLGDAVLDYMIVSKLMNRSPPL 1173
Query: 669 SPGDLTDMRSASVNNDCYALSSV-----------------------KHGLHKHILHASQE 705
+ +++A VN D A S+ + L + I H+S
Sbjct: 1174 PHSRMHMIKTAMVNKDFLAFLSLEEHELSQTESFVTEDGVVLTTNKRSALWRFIRHSSSG 1233
Query: 706 LYKWINITVDSFERLSLESTFGWESETSFP----------KALGDIIESLSGAIFVDSG- 754
+ T E L LE T +P K D+ E+L GAI+VDSG
Sbjct: 1234 IGPAQLETAKRHENLRLEILHELHHGTHYPWHILLKQQASKFYSDLFEALVGAIWVDSGS 1293
Query: 755 ---CNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQ 790
C+ + + P LE ++ P EL Q
Sbjct: 1294 LATCDAFLRRIGMLPYLERVLADSLHMQHPKEELGGLAQ 1332
>gi|302901921|ref|XP_003048541.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
gi|256729474|gb|EEU42828.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
Length = 1381
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 225/492 (45%), Gaps = 64/492 (13%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK-VLEAITTKKCQEGFHLESLETLG 459
+PSI+H + L+A L LL Q V I + VLEAI+++ E E LE LG
Sbjct: 888 LIPSIIHEIGVQLVASELSTTLL----QPVNINDLQLVLEAISSRSAHEPVDYERLEFLG 943
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LKY Q + + EGLL KD+++SN L + + L FI ++ F + +
Sbjct: 944 DSILKYCTVIQAYAEHPLWPEGLLVPFKDQLVSNKRLHRACLESGLSKFILSKAFTGRSY 1003
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--- 576
G L+D E + R K +ADVVEALIGA GG + L
Sbjct: 1004 --SGKKWKPLYLDD--FLPEESVEPLDR-ITGHKNLADVVEALIGASFQDGGMDKALKCI 1058
Query: 577 -IFLDRIGIKVDFVNVPYERQ--FQVQAERL---VNVRHLESLLNYSFRDPSLLVEALTH 630
+FL G K + R F + + + LE L+ YSFR SLL+EA+TH
Sbjct: 1059 SVFL---GDKCHWHEAGRGRDILFNSALDGVPLPPTLEPLEELIGYSFRKKSLLIEAVTH 1115
Query: 631 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSS 690
GSY R Y++LEFLGDAVLDY+I ++N P L DL +++A VN + A +
Sbjct: 1116 GSYAGDTHQRSYEQLEFLGDAVLDYIIVTKVFNVKPPLPHSDLHLIKTAMVNGEFLAFVN 1175
Query: 691 VKHGLHKHILHASQE-----------LYKWINI-----------TVDSFERLSLESTFGW 728
++H L + + + L++++ TV+ FE L E
Sbjct: 1176 LEHRLRRVETDVNADGVTEDTIKTLALWQFMRYTSPAIGNEQVRTVERFETLRREIVDAI 1235
Query: 729 ESETSFPKAL----------GDIIESLSGAIFVDSGCNK--EVVFE--SIRPLLEPMITP 774
E+ T +P L D+ E+L GA++VDSG + E VF I P LE +I
Sbjct: 1236 ENGTHYPWTLLARFQPKKFYSDLFEALIGAVWVDSGSTEVCEGVFHRFGILPYLERIIRD 1295
Query: 775 ETMRLQPARELN----EYCQKHHFSMKKTVAPRINGKAAVTVEVHAN--GTLFKHTHADA 828
+ P EL+ E ++++++ V P + V + A+ G L K
Sbjct: 1296 KVHIKHPKEELSALAVEKKVEYNYTVLDGVQPEYVCRLKVGDRLMADVRGGLNKEEIMTR 1355
Query: 829 DKETAKKVASKE 840
E A KV ++E
Sbjct: 1356 AAEQAVKVMNEE 1367
>gi|425772078|gb|EKV10503.1| RNA helicase/RNAse III, putative [Penicillium digitatum Pd1]
gi|425777255|gb|EKV15436.1| RNA helicase/RNAse III, putative [Penicillium digitatum PHI26]
Length = 1372
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 214/454 (47%), Gaps = 52/454 (11%)
Query: 342 CFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYS--- 398
C + +L + +N+L K E++ S+ C I P+ LST
Sbjct: 908 CIWTQPVLQAELVCLRRNFLDKMADEEKLSNSR---------CVICPQPLVLSTISKSVA 958
Query: 399 ---FTFVPSIMHRLQSLLLA------VNLKNMLLDHCMQNVTIPTSKVLEAITTK-KCQE 448
F F P+I+ R++S L+A + L + L+ ++ +T + E + + Q
Sbjct: 959 ATCFVF-PAIITRMESYLIAEEGCKLLGLGGIKLEFALEALTKDSDNTEEHRSLQIHVQR 1017
Query: 449 GF--HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLP 506
G + E LE LGDS LK A S LF + E V + +I N L K + KL
Sbjct: 1018 GMGKNYERLELLGDSVLKMATSISLFVQNPDDDEYDYHVNRMCLICNKNLFKNATELKLY 1077
Query: 507 GFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAF 566
FIR+ F MW PG S Y DH+ F + + G+ + KT+ADV EALIGA
Sbjct: 1078 EFIRSRGFSRHMWYPPG-LSLEYG-RDHAKFVDSE----GKHSLSEKTIADVCEALIGAS 1131
Query: 567 LSTGGEN--------VGLIFLDRIGIKV----DFVN---VPYERQFQVQAERLVNVRHLE 611
L +GG++ +F++ D+++ +P ++ + + +
Sbjct: 1132 LLSGGDDHRYDMAVKAVTVFVNSQKHTATSWKDYISAYSIPLYQKKAADGFEMNLAQQIF 1191
Query: 612 SLLNYSFRDPSLLVEALTHGSYML--PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+ Y F+ P LL A TH SY L ++P CYQRLE+LGDA+LD + +L++++PT
Sbjct: 1192 EKVGYEFKYPRLLRSAFTHPSYPLTWAKVP-CYQRLEYLGDALLDMVCVEHLFHRFPTRD 1250
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG-- 727
P LT+ + A V+N +VK GLH H+ H S L + + + ES
Sbjct: 1251 PQWLTEHKMAMVSNKFLGALAVKLGLHLHLQHFSNPLMIQNSKYAEELQLAESESNGEVN 1310
Query: 728 -WESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
W S + PK L D++E+ GAIFVDS + V+
Sbjct: 1311 YWLSTSDSPKCLPDMLEAYLGAIFVDSSFDFTVI 1344
>gi|389740167|gb|EIM81358.1| P-loop containing nucleoside triphosphate hydrolase protein [Stereum
hirsutum FP-91666 SS1]
Length = 1537
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 222/500 (44%), Gaps = 82/500 (16%)
Query: 373 SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 432
S+ S L PE + + + T Y+ ++PSI+ L + +++ LL + I
Sbjct: 953 SQRSILLLPEFSTVALTSF-VETQYAL-WMPSILRYLSITMTVCAMRDDLLLGSPRLSAI 1010
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
P + A+T+ Q G + + LETLGD+ LK+ S L Y HEG L+ +KD +S
Sbjct: 1011 PLKLLTTAVTSGVAQMGMNYQRLETLGDTVLKFVTSLNLLSEYPFWHEGYLARRKDHAVS 1070
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMW---------MIPGDNSGSYELNDHSLF------ 537
NA L K + KL +I + F P+ W + P ++ + + D +
Sbjct: 1071 NAQLAKAAYEKKLFKYIIRDMFAPRKWRPTYIGGAKVEPPSDAKAEDPEDMAPTVVKRPQ 1130
Query: 538 -----NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 592
++K + ++ +K +ADVVEALIGA G ++ + + G+ + +P
Sbjct: 1131 KGPSEAKKKQRAKAQGEISTKVLADVVEALIGAAYIHGSFDLAVECIKVFGLGLSCEWLP 1190
Query: 593 YERQFQVQAERLVNVRH-------LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 645
+ + R++ + +E++L Y+F +LLVEALTH SY Y+R+
Sbjct: 1191 IAARIEPMLSRVIELEFFPTQLSAVENILGYTFERKALLVEALTHASYQTDLGTISYERM 1250
Query: 646 EFLGDAVLDYLITVYLYNK-YPTLSPGDLTDMRSASVNNDCYAL---------------- 688
EFLGDAVLD L+T YLY+ P +L ++A VN
Sbjct: 1251 EFLGDAVLDMLVTDYLYHAPGKDYKPAELHLRKTAVVNGHFLGFICLRASTFISTEMPTK 1310
Query: 689 ----SSVKHG---------------LHKHILHASQELYKWINITVDSFER---------- 719
+S + G L K +LH++ ++ + + FE+
Sbjct: 1311 VNNPNSRRRGNAFLIQLEQQQERLYLSKCLLHSNSKVLELQSNAFARFEKTDGGEHIERS 1370
Query: 720 LSLESTFGWESETSF--PKALGDIIESLSGAIFVDSGCNKEVVFESIRPL-----LEPMI 772
L + F W + T PK L D++ESL GAIF+DS N +VV + +R L LE ++
Sbjct: 1371 LLEDPIFPWAALTWLEAPKFLSDMVESLIGAIFLDSKGNWDVVRDVLRLLGIWEVLERIV 1430
Query: 773 TPETMRLQPARELNEYCQKH 792
+ P L E+ K
Sbjct: 1431 RDDVEVKHPVSRLAEWAAKQ 1450
>gi|46132992|ref|XP_389201.1| hypothetical protein FG09025.1 [Gibberella zeae PH-1]
Length = 1495
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 191/425 (44%), Gaps = 68/425 (16%)
Query: 384 CRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSK 436
C +I+ P+++S + F P+I+HR+ S L+A LD C + +++IP +
Sbjct: 957 CFVILEPLNVSPLPIDVVSMALKF-PAIIHRIDSALIA-------LDACELFDLSIPPAL 1008
Query: 437 VLEAITTK--------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
LEA+T + G + E LE LGDSFLK A + +F +E L
Sbjct: 1009 ALEAMTKDSDNTEDHGKQQINFQAGMGSNYERLEFLGDSFLKMATTISIFVLKPKSNECL 1068
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI 542
V++ +I N L D KLP +IR+ FD + W D +L +
Sbjct: 1069 YHVERMLLICNNNLFNTAVDCKLPEYIRSLAFDRRTW-----------YPDLTLRKGKAF 1117
Query: 543 YVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIF-----LDRIGIKVDFVNVPYERQ 596
T R+++ K++ADV EALIGA +LS+ +N+ + + + Y
Sbjct: 1118 KATARQRLADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMAYDEYYAS 1177
Query: 597 FQV----QAERLVNVRHL----ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 648
F+V +A N R L Y F+ LL A TH SY YQRLEFL
Sbjct: 1178 FKVPDWQKASPNANQRRLVQKVADATGYHFKSAPLLQSAFTHPSYAYSGNVPNYQRLEFL 1237
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYK 708
GDA++D I YLY +P P LT+ + A +N VK LH H+L + +
Sbjct: 1238 GDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQFIS 1297
Query: 709 WINITVDSFERLSLESTFG-------------WESETSFPKALGDIIESLSGAIFVDSGC 755
I V E L+ E+ W + T+ PKA D IE+L GA+FVDS
Sbjct: 1298 KIRDYVAELE-LAEETARQEAEEDGTPMRMDFWLNATTPPKAYADSIEALMGAMFVDSEF 1356
Query: 756 NKEVV 760
+ VV
Sbjct: 1357 DYSVV 1361
>gi|157120736|ref|XP_001659747.1| dicer-1 [Aedes aegypti]
gi|108883036|gb|EAT47261.1| AAEL001612-PA [Aedes aegypti]
Length = 2193
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 169/350 (48%), Gaps = 58/350 (16%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-NVPYE----------RQFQ 598
+ K+VAD VEALIGA+L G L+ + +GI+V V VPY+ ++++
Sbjct: 1840 IPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKVPGSSQRYE 1899
Query: 599 VQAERLVNV----------------------RHL-------ESLLNYSFRDPSLLVEALT 629
+ +V HL E L Y F D S L++A+T
Sbjct: 1900 KDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFEDSLGYQFTDRSYLLQAMT 1959
Query: 630 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
H SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 1960 HASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASL 2019
Query: 690 SVKHGLHKHILHASQELY----KWINITVDSFERLSLESTFGWESE------TSFPKALG 739
+V+H HK+ H S L +++ I D+ +S E E E PKALG
Sbjct: 2020 AVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLISEDECDEAEDVEVPKALG 2079
Query: 740 DIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSM 796
D+ ES++GAIF+DS + + V++ R ++ P I ++ P REL E + F
Sbjct: 2080 DVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPKSPIRELLELEPETAKFGK 2139
Query: 797 KKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ +A + VTVEV GT + AK A+K L+ LK
Sbjct: 2140 PEKLAD--GRRVRVTVEVFGKGTF---RGIGRNYRIAKCTAAKCALRQLK 2184
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + +SN
Sbjct: 1655 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVSNL 1714
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1715 NLYRLGRRKVLGESMIATKFEPHDNWLPP 1743
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+L N+ PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1645 NLNNHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEG 1701
Query: 672 DLTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1702 KLSHLRSKQVSN 1713
>gi|403419584|emb|CCM06284.1| predicted protein [Fibroporia radiculosa]
Length = 1482
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 243/541 (44%), Gaps = 61/541 (11%)
Query: 359 NYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL 418
N+L + P++ S L P L + + +S Y ++PS++ L ++L V+L
Sbjct: 932 NFLIPLAAPSEGLPNEESIFLLPSLATVEL--VSNQDVYFAMYLPSVLRALANVLTVVSL 989
Query: 419 KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNH 478
+ LL + P S + A+T QE + + LETLGD+ LKY + QLF +
Sbjct: 990 RETLLAGSPVS-QAPFSLLTTAVTAPVSQELSNYQRLETLGDTVLKYVTTIQLFADHPLW 1048
Query: 479 HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFN 538
HEG L+ +KD +SN L K +L +I + F P+ W +++ ++
Sbjct: 1049 HEGYLARRKDHAVSNIQLAKQAISKRLYQWIIRDRFVPRKWR----PHYITDVDVQNVST 1104
Query: 539 ERKIYVTGRKK----VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE 594
E I + +KK + +K +ADVVE+LIGA GG ++ + G+ + + +P
Sbjct: 1105 EETIPLDDKKKKTQALSTKVLADVVESLIGAAYEHGGFDLAVDCTSIFGMGLTWKKIPVH 1164
Query: 595 -RQFQVQAERLVN----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
E L N + +E ++ Y F +LLV+ALTH SY Y+RLEFLG
Sbjct: 1165 IENILAITEELENPPPQLALVERMIGYQFSRKALLVQALTHASYHGDTASMSYERLEFLG 1224
Query: 650 DAVLDYLITVYLYNK-YPTLSPGDLTDMRSASVNNDCYA---------LSSVKHG----- 694
D+ LD ++T +LY+ PG + + A VN+ A + + H
Sbjct: 1225 DSALDMIVTDFLYHAPGKNYKPGHMHIRKEALVNSHFLAFICLRTHTDVDGISHRWTPAE 1284
Query: 695 ------------LHKHILHASQELYKWINITVDSFER--------LSLESTFGWESETSF 734
L++ +LH+S + N+ ++R L ++ + W + TS
Sbjct: 1285 GVTTTPDRQTIHLYQCLLHSSHRVLDDQNVAFGRYKRGGQDIQDALDRDAIYPWAALTSL 1344
Query: 735 --PKALGDIIESLSGAIFVDSGCNKEVVFESIRPL-----LEPMITPETMRLQPARELNE 787
PK + D++ESL GA+FVD+ + V +R L +E ++ + P L
Sbjct: 1345 QSPKFVSDMVESLLGAVFVDAAGDLGAVRGVLRTLGVVGIMERIVADDVDVQHPISRLTI 1404
Query: 788 YCQKHHFSMK-KTVAPRINGKAAVTVEVHANGT--LFKHTHADADKETAKKVASKEVLKS 844
+ K K K R +G + V V + + + + A +E + A+++ +K
Sbjct: 1405 WADKQEPKRKAKLEVTRADGNVSCAVLVDGSEVVEVTEVYRSRASQEEVRFAAAEKAIKI 1464
Query: 845 L 845
L
Sbjct: 1465 L 1465
>gi|324500060|gb|ADY40039.1| Endoribonuclease dcr-1 [Ascaris suum]
gi|333440972|gb|AEF32761.1| DCR-1 [Ascaris suum]
Length = 1970
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 164/341 (48%), Gaps = 64/341 (18%)
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYE------ 594
K++AD VEALIGA L G L F+ +G+KV F++ P E
Sbjct: 1633 KSIADAVEALIGAHLLELGPTATLKFMKWVGLKVLTEPVTLDPPLLRFIDTPQEPELAIC 1692
Query: 595 --RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 652
+F VQ + LE + Y F+D + L++A TH SY I CYQRLEFLGDAV
Sbjct: 1693 KLNEFWVQFQ----FSKLEDSICYRFKDRAYLLQAFTHASYYKNRITGCYQRLEFLGDAV 1748
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI 712
LDY+IT +L+ SPG LTD+RSA VNN +A +VK+ HKH + L+ I
Sbjct: 1749 LDYVITRFLFQHPRQYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFVAMCPGLHHMI-- 1806
Query: 713 TVDSFERLSLESTFGWES--------------------ETSFPKALGDIIESLSGAIFVD 752
+ F RL E F + + PKA+GDI ES++GAI++D
Sbjct: 1807 --EKFVRLCAEKNFSGANFNAEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLD 1864
Query: 753 SGCNKEVVFESIRPLLEPMIT------PETMRLQPARELNEY-CQKHHFSMKKTVAPRIN 805
SG + +VV+ L++ I P++ P REL E ++ FS + +
Sbjct: 1865 SGRSLDVVWRVFYNLMKETIEECCNNPPKS----PIRELLELEPERARFSKLERILE--T 1918
Query: 806 GKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
GK VTV++ + T AK A+K L+ L+
Sbjct: 1919 GKVRVTVDIQGKC---RFTGMGRSYRIAKCTAAKRALRYLR 1956
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + LF HEG LS + + +SN L
Sbjct: 1450 LLQALTMSNASDGINLERLETVGDSFLKYAVTDYLFHMNPEQHEGKLSFARSKEVSNCNL 1509
Query: 497 CKLGCDHKLPGFIRTEPFDPK-MWMIP 522
+LG LP + FDP W+ P
Sbjct: 1510 YRLGKKRNLPSLMVGAKFDPNDSWLPP 1536
>gi|402225633|gb|EJU05694.1| hypothetical protein DACRYDRAFT_113750 [Dacryopinax sp. DJM-731 SS1]
Length = 1596
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 198/404 (49%), Gaps = 40/404 (9%)
Query: 403 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSF 462
PS++ ++ +++ A + N+L + P + EA+ ++ + LE LGD+F
Sbjct: 952 PSLLRQITAVVRARAVINLL-----KLPPYPVPRFAEALVIPGVVPKYNYDRLEFLGDTF 1006
Query: 463 LKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL----CKLGCDHKLPGFIRTEPFDPKM 518
LK A S +F Y + HEG LSV KD + N L +LG H + + PK
Sbjct: 1007 LKLATSIHIFNKYPHRHEGQLSVLKDGSVRNTYLRGKAYRLGIYHY---NVTDKVCGPKR 1063
Query: 519 WMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 578
WM P + H+ + YV ++ + ++D VE+L+GA GG + L
Sbjct: 1064 WMPP--------VTTHTTLDGVIPYV--KQTSLRRCLSDCVESLLGAGYLCGGLDGLLRT 1113
Query: 579 LDRIGIKVDFVNVPYERQFQVQAERL---VNVRHLESLLNYSFRDPSLLVEALTHGSYML 635
IG+ + P+ ++ + ++R L+ L Y FR+P LL+EALTH ++
Sbjct: 1114 GTAIGLCFGGME-PWSHRYTGDSPSCGASTSLRLLQDTLGYEFRNPLLLLEALTHPTFPD 1172
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-G 694
+ P YQRLEFLGDAV+D I YL++K+P + LT M+ V N +++ G
Sbjct: 1173 SQTP-SYQRLEFLGDAVVDVFIVDYLFHKFPACTAHKLTWMKHLIVCNSLLGAVAIRELG 1231
Query: 695 LHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
L+KH+L+ ++ L I ++V E LS + E PKAL D++E++ GA+ VD+
Sbjct: 1232 LYKHMLYMARRLDLEITLSVRVLEPLSYQELAEKWWEFDPPKALNDVLEAVLGAVLVDTN 1291
Query: 755 -----CNK--EVVFESIRPLLEPMITPETMRLQPARELNEYCQK 791
C E +F+ I PL P + L P EL + +
Sbjct: 1292 YDLQLCRPVLERLFKDILPLAHPDVP-----LHPVMELYMWAAR 1330
>gi|442570277|sp|Q1DKI1.3|DCL1_COCIM RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|392869759|gb|EJB11896.1| dicer-like protein 1 [Coccidioides immitis RS]
Length = 1500
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 186/409 (45%), Gaps = 68/409 (16%)
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK--VLEAITTK-------KCQE------- 448
I+ R++S L+A L+ C Q + +P S LEA+T + Q+
Sbjct: 1005 IISRIESYLIA-------LEAC-QELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGM 1056
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G + E LE LGD FLK A S LF ++ E VK+ ++ N L K KL F
Sbjct: 1057 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYAF 1116
Query: 509 IRTEPFDPKMW--------MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
IR++ F + W G + G+ E N H+L + KT+ADV E
Sbjct: 1117 IRSQSFSRRGWYPGGLTLLQGKGQSKGATE-NKHALAD--------------KTIADVCE 1161
Query: 561 ALIGAFLSTGGEN----------VGLIFLDRIGI-----KVDFVNVPYERQFQVQAERLV 605
ALIGA +N L+ D + ++P + V A L
Sbjct: 1162 ALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSIPKYQTAVVDAAELD 1221
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
++ L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD ++Y+
Sbjct: 1222 LAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMACVEHIYH 1280
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+P P LT+ + A V+N +V+ GLH H+ H S L I V+ E LE
Sbjct: 1281 KHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELE 1340
Query: 724 ST---FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
S W + PK L D++E+ GAIF+DSG + EVV E + L+
Sbjct: 1341 SGDPPDAWTLTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLK 1389
>gi|119478976|ref|XP_001259517.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
gi|158706438|sp|A1DE13.1|DCL1_NEOFI RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
gi|119407671|gb|EAW17620.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
Length = 1538
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 228/520 (43%), Gaps = 73/520 (14%)
Query: 382 ELCRIIMGPMSL-STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEA 440
E RI P S+ ST +F P+I+ RL S L+A+ + L + I LEA
Sbjct: 1014 EPLRISAIPTSIVSTCLAF---PAIISRLDSYLIALEACDEL------ELVIRPDFALEA 1064
Query: 441 IT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVK 486
T + +E G + E LE LGD FLK A S L+ + E V
Sbjct: 1065 FTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALYTQNPDDDEFDYHVN 1124
Query: 487 KDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTG 546
+ +I N L ++ +IR+ F +W D DHS +K+ G
Sbjct: 1125 RMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWY--PDGLTLLHGKDHS----KKLLSEG 1178
Query: 547 RKKVKSKTVADVVEALIGAFLSTGG-EN-------VGLIFLD----RIGIKVDFVNVPYE 594
+ + KT+ADV EALIGA L +GG EN +D R+ +++ +
Sbjct: 1179 KHALGEKTIADVCEALIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWKEYITLYTM 1238
Query: 595 RQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRL 645
++Q + R RH+E L Y F P LL A+TH S Y +P CYQRL
Sbjct: 1239 PKYQTEKPRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVP----CYQRL 1294
Query: 646 EFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE 705
EFLGD++LD + L+ ++P P LT+ + A V+N SVK G H+ I+ S
Sbjct: 1295 EFLGDSLLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNP 1354
Query: 706 LYKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCN---KEV 759
L I V+ E ES W PK L D++E+ GAIFVDS + EV
Sbjct: 1355 LQAQITHYVEEIESAQAESRGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIEV 1414
Query: 760 VFE-SIRPLLEPMITPETM-RLQPAREL-----NEY-CQKHHFSMKKTVAPRINGK-AAV 810
FE I+P E M +T P L NEY C ++ +K P I+G A V
Sbjct: 1415 FFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCT--NYCLKAGELPTIDGAPAGV 1472
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
V +G + + + + AK AS++ L L P
Sbjct: 1473 LAAVIVHGNVISEARSSSSR-YAKVKASEKALAVLDGLLP 1511
>gi|119487463|ref|XP_001262524.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
gi|158705692|sp|A1D9Z6.1|DCL2_NEOFI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119410681|gb|EAW20627.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
Length = 1388
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 195/414 (47%), Gaps = 61/414 (14%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTSKVLEA 440
+ C I P +++ F F+ +I+ RL++ L+A L+ +L ++V T ++ A
Sbjct: 888 DACTIDRLPFTMAIF--GLFISAIVERLETELIATRLRETIL----RDVGFKSTDHIITA 941
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I+T + + E LGDS LK++ S QLF + N HEG LS + I+ N L K
Sbjct: 942 ISTPFAHALTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAA 1001
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L +I T+ + W P L +E+ V ++++ +K +ADVVE
Sbjct: 1002 LDTGLDAYIVTKRIASRKWSAP-------------LISEKLERVPAKRQMSTKVLADVVE 1048
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAERLVNVRHLESLLNYS 617
ALIGA GG + R+ +++ V R ++ R + L+ + Y+
Sbjct: 1049 ALIGAAYMDGGHATAQACIRRLLPEINLHAVDTRTATRSVAPESARHMMNERLKDHIGYT 1108
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP-GDLTDM 676
F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N +P P GD+T +
Sbjct: 1109 FEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFN-HPIQRPQGDMTKI 1167
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKW-------INITV 714
+ A VN + A ++ + L +Q EL+++ +N
Sbjct: 1168 KHAVVNANLLAFLCMESATSEEKLDVAQTSKDSFAVTTSQESVELWRFMRYRGQNLNAAR 1227
Query: 715 DS------FERLSLEST------FGWE--SETSFPKALGDIIESLSGAIFVDSG 754
D+ R + S+ + W S + K DI+ES+ GAIFVDSG
Sbjct: 1228 DASLARHRALRDEIASSLLHAPHYPWHALSRLNADKFFSDIVESVLGAIFVDSG 1281
>gi|167046024|gb|ABZ10543.1| dicer-like protein C [Trichoplax adhaerens]
Length = 358
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 175/352 (49%), Gaps = 38/352 (10%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LEA+T + ++ LE LE LGDSFLK+ + LF ++ +HEG L+ + +I+ N L
Sbjct: 1 LLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNL 60
Query: 497 CKLGCDHKLPGFIRTEPFD---PKMWMIPGD---NSGSYELNDHSLFNERKIYVTGRKKV 550
KLG + +I +PF+ + W+ PG +S L++ + +K
Sbjct: 61 LKLGKSTPICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLDEKVTSDLDGDKAVTHQKF 120
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VN------VPYERQFQVQAER 603
SK++ADV++A++ A L E F+ + + F +N +P +
Sbjct: 121 SSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDNISSNEIN 180
Query: 604 LV----NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLIT 658
+ N+ LE ++ YSF++ ++ ALTH SY +I Q+LEFLGD +L Y+I
Sbjct: 181 KIYETNNLERLEKVIGYSFQNKLFMIRALTHSSYHHHDIAIESNQKLEFLGDTILQYIIA 240
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE 718
+ +N +P P L D + A VNN C A+ + G+ K++ S +L++ +D F
Sbjct: 241 RHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQESPDLFR----DIDQFA 296
Query: 719 RL---------------SLESTF-GWESETSFPKALGDIIESLSGAIFVDSG 754
++ E+ F + E PK + D++E+L GAI++D+G
Sbjct: 297 KIITCDYMIDDEMNYNDRTEALFENFTEEVKIPKPVSDVVEALIGAIYIDTG 348
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
+ LE LGD+ L+Y ++ F ++ + L ++ I++N L +G + ++ E
Sbjct: 225 QKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQE 284
Query: 513 P------FDPKMWMIPGDNSGSYELNDHSLFNER--KIYVTGRKKVK-SKTVADVVEALI 563
D +I D Y ++D +N+R ++ ++VK K V+DVVEALI
Sbjct: 285 SPDLFRDIDQFAKIITCD----YMIDDEMNYNDRTEALFENFTEEVKIPKPVSDVVEALI 340
Query: 564 GAFLSTGGENVG 575
GA GE++
Sbjct: 341 GAIYIDTGESIA 352
>gi|400595165|gb|EJP62972.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1465
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 186/808 (23%), Positives = 321/808 (39%), Gaps = 151/808 (18%)
Query: 48 CTLYLPNNCPIQT---VIAQGNIKTLKQTACLEACKKLHQIGALTDNLLPDV---VVEEH 101
C + LP++ P + ++ + ++ + A EAC +L ++G++ NL P +
Sbjct: 614 CWVILPDSAPFNSTTGILERSKVRA-RCAAAYEACTRLIEMGSINKNLQPTFKKNLPRMR 672
Query: 102 DAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRT 161
+A+ + + + P++ P +++ + P I L R
Sbjct: 673 NARLALSSKKQKVYTMLVKPKMWTSLPAGIPAVLFQTFVQVLPDSAAVTP---IALLTRE 729
Query: 162 ELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLN 221
EL +I + + D ++ L G +Q++P++V F + LF + + +
Sbjct: 730 EL-PDIGPIKLFVSADV-IMSAKLIPGGAVQVSPEQVQKLAAFTLCLFDDVFSKKFEAKD 787
Query: 222 EILKGLWLRDNLEIDYLLLPAS-------EQSIDWEPVASLSFPCDIGLKHHKNCSTMSN 274
E EI + PAS + +IDW+ + + +M
Sbjct: 788 E-----------EIPFYFAPASMALYEDEKGAIDWQELEHVVL-------------SMHQ 823
Query: 275 ARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHL-------------NANSLFTR 321
+ VV + + + V PHSG +I + H + NS +
Sbjct: 824 SPVVDPGN------IARHYFVVDPHSGARKFIIHEIEHALRATDQTPAGVPEHKNSGYQT 877
Query: 322 NDGGAITYKKHYEERYGIQLCFDQE------LLLNGRRIFHAQNYLSKCRQEKQ----RE 371
+D + Y + FD E LL+ RR F + + + +++ +
Sbjct: 878 SDRSIMQYSCSTRRAQRSSIVFDTEQPVYKAWLLSLRRNFLDDDDMETVKGDQRCYITLQ 937
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
K+S +P ++ R + +PSI+HRL + L+ ++ML +
Sbjct: 938 CLKVS-AIPADVARAAL------------LLPSILHRLDTALIVTEARDML------GLN 978
Query: 432 IPTSKVLEAITT------------------KKCQEGF--HLESLETLGDSFLKYAASQQL 471
+P EA T ++ Q G + E LE LGDSFLK A + L
Sbjct: 979 LPLQLAWEAFTKGADDADDDDGELDAEHEHEQQQHGGQRNYERLEFLGDSFLKMATTIAL 1038
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL 531
+ E V++ ++ N L D L +IR++ FD + W
Sbjct: 1039 YTRNSEATEFEHHVERMLLLCNKNLFNTALDLGLQSYIRSDRFDRRTW-----------Y 1087
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN- 590
+ L + T +++ KT+ADV EA+IGA +G + G + + + VN
Sbjct: 1088 PNLPLVRGKSAKATVVQQLGDKTIADVCEAIIGAAYMSGVQQGGNMD-EAVKAVTKMVNN 1146
Query: 591 --------VPYERQFQVQAERL----VNVR----HLESLLNYSFRDPSLLVEALTHGSYM 634
Y F V A L V+VR + +++ Y FR P LL A TH SY
Sbjct: 1147 DNHKMTSFSDYYAAFSVPAWHLSPGSVSVRATVDRVAAIIGYRFRSPLLLRSAFTHASYK 1206
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG 694
EIP YQ LEFLGDA+LD +I +L+ P P LT+ + + +N V+ G
Sbjct: 1207 AEEIP-SYQTLEFLGDALLDMVIVDHLFRTRPHAGPQALTESKMSVCSNQFLGCLCVELG 1265
Query: 695 LHKHILHAS----------QELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIES 744
LH+ +L A +E ++ + + W T PKAL D++E+
Sbjct: 1266 LHRELLTADAAVPGHVKAFEEKVAYLREQAAGTGASAATNKAYWTLATRPPKALADVVEA 1325
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMI 772
L GA+FVD+ + VV + ++P I
Sbjct: 1326 LIGAMFVDARYDLSVVANFFQRFVQPHI 1353
>gi|358396694|gb|EHK46075.1| hypothetical protein TRIATDRAFT_292263 [Trichoderma atroviride IMI
206040]
Length = 1456
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 232/539 (43%), Gaps = 95/539 (17%)
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT--- 442
+++ P+ + + +P +M+R+ S+L+A + +++ ++ I LEAIT
Sbjct: 911 LVVSPLPIDIVFMALLLPVVMYRIDSVLIASEVCSLV------DLAIRPELALEAITKDS 964
Query: 443 --TKKCQE---------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
T++ E G + E LE LGD+FLK A + ++ Y + +E VK+ ++
Sbjct: 965 FNTEEHGEDQVDFQPGMGKNYERLEFLGDTFLKMATTISVYTLYPHENEFEYHVKRMLML 1024
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVK 551
+N L + KLPG+IRT FD + W +D L + R+
Sbjct: 1025 NNKNLFTHAIEKKLPGYIRTRAFDRRTWYP----------SDLRLKKGKATKAKARRHCL 1074
Query: 552 S-KTVADVVEALIGAFLSTGGEN---------VGLIFLDRIGIKVDFVN------VPYER 595
S K++ADV EALIGA TG N V + ++F + P
Sbjct: 1075 SHKSIADVCEALIGAAYLTGKSNNSMDMAVKAVTAMVSSENHTMINFSDYRARYTTPEWH 1134
Query: 596 QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE-IPRCYQRLEFLGDAVLD 654
++ A + V + ++ Y F+ LL A H SY+ E I R YQ+LEFLGDA++D
Sbjct: 1135 TYEPNAAQRNMVERIAEIIGYRFQCAPLLRSAFKHSSYVYEEKIRRDYQQLEFLGDALID 1194
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
++ +LY ++P P LT+ + A V+N VK GL KH++ A+ L+ I
Sbjct: 1195 MVVVDFLYTRFPEADPKWLTEHKMAMVSNQFLGFLCVKLGLSKHLMLATSSLHSLIREYT 1254
Query: 715 D----------------------------SFERLSLESTFGWESETSFPKALGDIIESLS 746
S E S+ F W PKAL D++E+L
Sbjct: 1255 AEAKEAEEKAKGCRKPHGNKAAAGSDKGASAEAPSVTLDF-WAEIQQPPKALADVVEALV 1313
Query: 747 GAIFVDSGCNKEVV----FESIRPLLEPMIT--------PETMRLQPARELNEYCQKHHF 794
GA+FVDSG + VV + I+P E M P T+ + +E + C +
Sbjct: 1314 GAMFVDSGYSFSVVQDFFAKFIQPYFEDMSLLSSFASNHPVTVLIHALQE-DYRCTQWKL 1372
Query: 795 SMKKTVAPRINGKAAVTVE------VHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
M + A+ E + +G + H + TAK +K LK L++
Sbjct: 1373 HMASVPPSTDDAGVAILAESELLCALMIHGNVIAHATSTKSGVTAKLTVAKLALKKLES 1431
>gi|336367926|gb|EGN96270.1| hypothetical protein SERLA73DRAFT_112480 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1460
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 194/406 (47%), Gaps = 41/406 (10%)
Query: 369 QREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA------VNLKNML 422
+R+ ++ +P + CR + S + +F +P + R+ + A + L +
Sbjct: 911 KRQIARAGLLVPKDACRRVH--FSEDVYRAFLLLPKLCRRVTDVYRARQERIELGLPMIA 968
Query: 423 LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
D ++ T+PT+ + F+ + LETLGDS LK ++ + Y + HEG
Sbjct: 969 EDLLIEASTLPTTSL-----------TFNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQ 1017
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW--MIPGDNSGSYELNDHSLFNER 540
LS + +SN L + +L F+ +E + W +P D D +L R
Sbjct: 1018 LSHLRQNSVSNRTLLSRAKEIELERFLNSESHNLHFWRYTVPEDT-------DSTLCRIR 1070
Query: 541 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ 600
+ + R++ +++ D +EA +GA TGG ++ L +G+ +P+ ++ +
Sbjct: 1071 R---STRREFPRRSLQDCMEATLGAAFVTGGIDMALQAGTALGLSFGG-PIPWSLKYSRR 1126
Query: 601 AERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 657
E L+ L Y F LLVEA TH S+ YQRLEFLGDAV+D ++
Sbjct: 1127 PESSPAPHLFADLQESLCYEFHRGDLLVEAATHPSFAT-SASSSYQRLEFLGDAVIDLVV 1185
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDS 716
YLY ++P + G L+ RS +V A SV+ LHK +L + EL IN V
Sbjct: 1186 LNYLYRRFPQANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPI 1245
Query: 717 FERLSLESTF--GWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
E S+E GW+ + PKAL D++ES+ GAIFVDS N E V
Sbjct: 1246 LESTSVEDIINKGWKYDP--PKALSDVLESVVGAIFVDSAYNFEKV 1289
>gi|336380656|gb|EGO21809.1| hypothetical protein SERLADRAFT_441040 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1460
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 194/406 (47%), Gaps = 41/406 (10%)
Query: 369 QREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLA------VNLKNML 422
+R+ ++ +P + CR + S + +F +P + R+ + A + L +
Sbjct: 911 KRQIARAGLLVPKDACRRVH--FSEDVYRAFLLLPKLCRRVTDVYRARQERIELGLPMIA 968
Query: 423 LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
D ++ T+PT+ + F+ + LETLGDS LK ++ + Y + HEG
Sbjct: 969 EDLLIEASTLPTTSL-----------TFNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQ 1017
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW--MIPGDNSGSYELNDHSLFNER 540
LS + +SN L + +L F+ +E + W +P D D +L R
Sbjct: 1018 LSHLRQNSVSNRTLLSRAKEIELERFLNSESHNLHFWRYTVPEDT-------DSTLCRIR 1070
Query: 541 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ 600
+ + R++ +++ D +EA +GA TGG ++ L +G+ +P+ ++ +
Sbjct: 1071 R---STRREFPRRSLQDCMEATLGAAFVTGGIDMALQAGTALGLSFGG-PIPWSLKYSRR 1126
Query: 601 AERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 657
E L+ L Y F LLVEA TH S+ YQRLEFLGDAV+D ++
Sbjct: 1127 PESSPAPHLFADLQESLCYEFHRGDLLVEAATHPSFAT-SASSSYQRLEFLGDAVIDLVV 1185
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDS 716
YLY ++P + G L+ RS +V A SV+ LHK +L + EL IN V
Sbjct: 1186 LNYLYRRFPQANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPI 1245
Query: 717 FERLSLESTF--GWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
E S+E GW+ + PKAL D++ES+ GAIFVDS N E V
Sbjct: 1246 LESTSVEDIINKGWKYDP--PKALSDVLESVVGAIFVDSAYNFEKV 1289
>gi|328770756|gb|EGF80797.1| hypothetical protein BATDEDRAFT_24696 [Batrachochytrium dendrobatidis
JAM81]
Length = 1641
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 169/354 (47%), Gaps = 54/354 (15%)
Query: 434 TSKVLEAITTKKCQE-GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
T K+L+ TT G+ E LETLGDSFLK S LF +EG ++ ++ +I
Sbjct: 1117 TPKLLQIATTSSASNMGYSYERLETLGDSFLKIHQSLHLFCRNPFKNEGWMTQQRIKIEK 1176
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS 552
N L + D L FI T+P + W+ P N + +++ +
Sbjct: 1177 NQVLHQKALDAGLQHFILTKPLTKRNWVPPAKN------------------IRLNQEISN 1218
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRI---GIKVDFVNVPYERQFQVQA-------- 601
KT+A +EA+IGA + GG + + R+ + D+ N ++ +QA
Sbjct: 1219 KTLAGSIEAVIGACVEEGGVEQAALAVSRLLSDEYETDWSNYHHDLYTSIQASPSSTDYY 1278
Query: 602 ERLVNV-----RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 656
E +V+V + +E + Y+FRD +LL EALTH ++ +QRLEFLGDAVL YL
Sbjct: 1279 ESVVHVDPIATKQIEEQIGYTFRDKTLLWEALTHSG--TGKLGSMFQRLEFLGDAVLSYL 1336
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH-------ASQELYKW 709
+LY P L+PG L+ +R+ V N A S++ GL K+I H A W
Sbjct: 1337 AMQHLYKITPPLNPGGLSKLRAELVCNQFLACVSIQIGLVKYIRHTDMTMEAAIGRFTAW 1396
Query: 710 IN--ITVDSFERLSLEST--------FGWESETSFPKALGDIIESLSGAIFVDS 753
+ + +S L + ++ W + PK GD+ ES+ GA+FVDS
Sbjct: 1397 VQGYLASESSTPLPISTSATQIASARLFWNKGNTAPKTAGDVYESMLGAVFVDS 1450
>gi|340514590|gb|EGR44851.1| predicted protein [Trichoderma reesei QM6a]
Length = 1416
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 197/433 (45%), Gaps = 63/433 (14%)
Query: 384 CRIIMGPMSLSTFY----SFTFV-PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C II+ P+ +S Y + V P +M+R+ S+L+A +++ +TI + L
Sbjct: 885 CYIILEPLRVSPIYIDAVAMALVLPVVMYRVDSVLIAQEACSLV------GLTIRSDLAL 938
Query: 439 EAIT-----TKKCQE---------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA+T T++ E G + E LE LGD+FLK A + +F + E
Sbjct: 939 EAVTKDSFNTEEHGEHQVDFQPGMGRNYERLEFLGDTFLKMATTISVFTLFPTADEFEYH 998
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + ++ N L K + +P +IRT+ FD + W Y N +L +
Sbjct: 999 VTRMVMLCNQNLFKHAVEKGMPAYIRTKAFDRRTW---------YPSN-MTLKRGKAAKT 1048
Query: 545 TGRKKVKSKTVADVVEALIGA-FLST--GGENVGLIFLDRIGIKVDFVNVPYERQF---- 597
+ + K++ADV EALIGA ++S+ G ++ + + + ++ Y+ F
Sbjct: 1049 ESKHCLSHKSIADVCEALIGAAYMSSSPGDMDMAVKAVAAMVCSINHTMTSYKDYFATFT 1108
Query: 598 -------QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
Q A + + V + + Y F+ L A H SY+ R YQRLEFLGD
Sbjct: 1109 APKWYSQQATAAQRLTVDKVAEITGYRFKAAPLARSAFRHPSYVFENNIRDYQRLEFLGD 1168
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
+LD I +L+ ++P P LT+ ++A V+N VK GLHKHIL A+ L I
Sbjct: 1169 GLLDMAIVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSSLLGDI 1228
Query: 711 NITVDSFERL-------------SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
E+ S+ F W PK L D++E+L GA+FVDS +
Sbjct: 1229 GRYAAQLEQAEETARQTLRAEAESIPQNF-WVDVPQPPKVLADVVEALVGAMFVDSEYSF 1287
Query: 758 EVVFESIRPLLEP 770
VV + ++P
Sbjct: 1288 SVVLDFFTKFIQP 1300
>gi|242215871|ref|XP_002473747.1| predicted protein [Postia placenta Mad-698-R]
gi|220727142|gb|EED81071.1| predicted protein [Postia placenta Mad-698-R]
Length = 1725
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 194/414 (46%), Gaps = 60/414 (14%)
Query: 361 LSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKN 420
LS CR+ + E + +F + PELC I + ++R + + + L
Sbjct: 902 LSMCRRAEFSEGVRDAFHVLPELCHRI----------------TDVYRAHAARVELGLPP 945
Query: 421 MLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHE 480
+L D +Q +TIP++ GF+ + LETLGDS LK LF + HE
Sbjct: 946 ILDDLLIQALTIPSANA-----------GFNNQRLETLGDSVLKLTTVVHLFNRFPFRHE 994
Query: 481 GLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW--MIPGDNSGSYELN----DH 534
G L + +SN L + L ++ E ++W + ++ S+ + H
Sbjct: 995 GQLDTLRRNSVSNRTLLARAKEVGLEEYLSCESQSMRVWRYTLAAEDDPSWSVEPRRRAH 1054
Query: 535 SLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE 594
+F R ++ D +EA +GA +TGG + L +G+ + +P++
Sbjct: 1055 RVFPRR-------------SLQDCMEATLGAAFTTGGMGMALRAGTALGLSLGG-PLPWD 1100
Query: 595 RQF-----QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
++ + L + L+ L Y FR LL+EA+TH S+ E YQRLEFLG
Sbjct: 1101 IRYGGCIPKSPVSALFTL--LQESLGYRFRSGRLLLEAMTHPSFNSFET-SSYQRLEFLG 1157
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYK 708
DAV+D + YLYNK+P + G L+ RS +V A +VK GLHK +L + EL
Sbjct: 1158 DAVVDLAVMRYLYNKFPQATSGQLSWARSRAVCAPSLASVAVKRLGLHKLLLVNNVELSI 1217
Query: 709 WINITVDSFERLSLESTF--GWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
IN V E LS E W+ + PKA+ D++ES+ GA+ VDS N E+
Sbjct: 1218 AINNYVPILEELSNEELIHNAWKQDP--PKAISDVMESVLGAVLVDSDYNWEIA 1269
>gi|256077012|ref|XP_002574802.1| ribonuclease III [Schistosoma mansoni]
Length = 907
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 169/342 (49%), Gaps = 29/342 (8%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTY-QNHHEGLLSVKKDRIISN 493
+ ++E T ++ LE LE GDSFL + A+ ++ T Q+ EG LS K+ ++SN
Sbjct: 530 NNLIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSN 589
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
A LC + CD K + + F P +P Y + + + ++Y ++ K
Sbjct: 590 AHLCDIACDLKWYEYCTGQTFSPPEHFLPP----CYSVASEACKYDPRLYT----RLTDK 641
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESL 613
++AD+VEALIG FL G + L I + + +R FQ+Q +
Sbjct: 642 SLADMVEALIGCFLLRSGLSAAFNLLHYFQICPEIILELNQRFFQLQEK----------- 690
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
L Y F+ LL EA+TH S + + YQRLEFLGD++L ++I+ YL+ K P SPG L
Sbjct: 691 LGYYFKGIELLAEAMTHQSSINKQYWGNYQRLEFLGDSILGHIISNYLFQKCPNSSPGAL 750
Query: 674 TDMRSASVNNDCYALSSVKHGLHKHI------LHASQELYKWINITVDS-FERLSLESTF 726
T RS V+N A V+H ++ I L A + K I+ DS FER+ L +
Sbjct: 751 TTARSTVVSNINLANVVVEHDIYPFIDFGNCSLKACIDDIKSIHRQTDSHFERIELITK- 809
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
S K L D+ ES+ GAIFVDS N +V I L
Sbjct: 810 -KVSSGLNVKVLADVFESILGAIFVDSNGNHQVASSIIHRFL 850
>gi|358058780|dbj|GAA95743.1| hypothetical protein E5Q_02400 [Mixia osmundae IAM 14324]
Length = 1610
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 173/349 (49%), Gaps = 23/349 (6%)
Query: 432 IPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
I +++EA+T G ES+ETLGDS LK S L+ Y EG L+ + +
Sbjct: 1068 IAMHRMIEALTLPGSAVGRSYESIETLGDSVLKVLTSVHLYLAYPLKSEGALTCLRTNSV 1127
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVK 551
N L + L ++ E W+ P D S ++ D F +K++
Sbjct: 1128 ENVYLHHKAVESSLGKYLIHERMRLNTWL-PRDAEHSADMGDGCEFE---------RKIQ 1177
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQA-ERLVNVR-- 608
+ ++D +E+++GA TGG ++ + + + R + + ER V+ R
Sbjct: 1178 RRALSDCIESILGAAYLTGGLSMAMDTARAFNLPLGDGASWRSRSIEARRRERSVSPRIG 1237
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE L+ YSF + L++ALTH SY+ P P Y+R EFLGDA+LD+ LY ++ +
Sbjct: 1238 ELEDLVGYSFSNNDCLIQALTHRSYLSPTTP-SYEREEFLGDAMLDFWAITRLYARFDGI 1296
Query: 669 SPGDLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSFERLS----LE 723
+P L+ +R+ V N ++ ++ L +++LH + E + I E + E
Sbjct: 1297 TPQQLSRLRALLVCNGTLGYVAMLRLRLGEYVLHNADEFTDQLEIAQQQAEAMPPAEFCE 1356
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
+ W+ PK LGD +E+++GAIFVDSG + E+VF+ +L P++
Sbjct: 1357 QVWFWDP----PKVLGDCVEAIAGAIFVDSGGDPELVFKYFDRILGPLM 1401
>gi|403179647|ref|XP_003337961.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165151|gb|EFP93542.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1460
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 215/451 (47%), Gaps = 59/451 (13%)
Query: 355 FHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLL 414
FH N LSK + +P +I LP +LC+ P S+ + F+++PS+ L L
Sbjct: 873 FHVLNNLSKS-ESTVVQPHRIL--LPLKLCKGTHIPRSM--WKVFSYLPSLTRLLHDSLQ 927
Query: 415 AVNLKNMLLDHCMQNVTIPTSKVL---EAITTKKCQEGFHLESLETLGDSFLKYAASQQL 471
A L + + PT +L +A+T + ++LETLGD+FLK A S +
Sbjct: 928 ATTL--------FKRLDFPTISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSVHV 979
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL 531
+ ++ EG +S + R + NA L + LP I ++ F + P G EL
Sbjct: 980 YLSHLKKGEGDMSHVRSRSVDNAYLRRKAIQANLPASILSQRFRTDRFRDPQTEDGK-EL 1038
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-- 589
+ + +K+ + ++DVVEAL+GA TGG +GL +IG +D
Sbjct: 1039 PNGNF----------SRKIPKRVLSDVVEALLGAGFLTGGIELGL----KIGTALDLCFG 1084
Query: 590 -NVPY-ERQFQVQAER----------LVNVRHLESLLNYSFRDPSLLVEALTH---GSYM 634
P+ ER + E L+ + LE + Y F++ LLV+ALTH S+M
Sbjct: 1085 GTAPWSERPVNIGLESITHDALEPSTLLKCQALEEKIGYVFKEKLLLVQALTHRSANSFM 1144
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH- 693
CY+R E+LGDAV+D I + Y ++ + +LT R+ V+N ++K
Sbjct: 1145 T----NCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFLALKKL 1200
Query: 694 GLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF-----PKALGDIIESLSGA 748
GL + I+HAS+ + +++ + + + + F PK L D++E++ GA
Sbjct: 1201 GLQEIIMHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFDPPKILNDVLEAIVGA 1260
Query: 749 IFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
+FVDSG N + + ++ + E +I P RL
Sbjct: 1261 VFVDSGFNLQSAYRTLDIIFEDVI-PGLSRL 1290
>gi|198421916|ref|XP_002122382.1| PREDICTED: similar to rCG20888 [Ciona intestinalis]
Length = 2053
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 165/348 (47%), Gaps = 57/348 (16%)
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPYERQ 596
K++AD VEAL+GA+L+T G + L +G+ V ++ P +
Sbjct: 1710 KSIADCVEALLGAYLTTCGHRSAQLLLCHLGLNVLPKVAQAETSKTVDRFGYLTPPTNKM 1769
Query: 597 FQVQAER-------LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
+ + + LV + E +NY+F++ + L++A TH SY + CYQRLEFLG
Sbjct: 1770 LECRPNQQNKLDQLLVALSGFERKINYTFKNKAYLLQAFTHASYYYNTVTDCYQRLEFLG 1829
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
DAVLD+LIT +L+N SPG LTD+RSA VNN +A +V + HK+ S EL+
Sbjct: 1830 DAVLDFLITRHLFNDERHHSPGALTDLRSALVNNTIFASLAVHYDFHKYFKSISPELHHI 1889
Query: 710 IN-------------------------ITVDSFERLSLESTFGWESETSFPKALGDIIES 744
I + + + L + G + PKALGDI ES
Sbjct: 1890 IEDFVMYQQKQEDAQGMDAHLMRDYDRVEIVAPSSLEKDEEEGENEDVEVPKALGDIFES 1949
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMKKTVA 801
++GAI++DSG + V++ ++ P+I + P REL E + FS +
Sbjct: 1950 VAGAIYMDSGMDLSSVWKVYSVMMLPLIEKFSACVPRSPVRELLEMEPETAKFSCAEK-- 2007
Query: 802 PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
R +GK VTVE+ G + AK A++ L+ LK F
Sbjct: 2008 -RYDGKVRVTVEIIGKG---RFKGVGRSYRIAKSAAARRALRYLKGPF 2051
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + L+ TY HEG LS + + +SN L
Sbjct: 1461 ILQALTLSNASDGFNLERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVSNYNL 1520
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIP 522
++G L G + FDP + +P
Sbjct: 1521 YRIGKQFGLAGKMTGLIFDPTVNWLP 1546
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 621 PSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
P L+++ALT L + +RLE LGD+ L + +TVYLY YP G L+ MRS
Sbjct: 1458 PGLILQALT-----LSNASDGFNLERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRS 1512
Query: 679 ASVNN 683
V+N
Sbjct: 1513 KKVSN 1517
>gi|168177328|pdb|3C4B|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 145 bits (367), Expect = 7e-32, Method: Composition-based stats.
Identities = 102/257 (39%), Positives = 136/257 (52%), Gaps = 28/257 (10%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E +NY F++ + L++A TH SY I YQRLEFLGDA+LDYLIT +LY S
Sbjct: 18 FEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQHS 77
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FG 727
PG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G
Sbjct: 78 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEXQG 133
Query: 728 WESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
+SE PKA GDI ESL+GAI+ DSG + EVV++ P +P+I
Sbjct: 134 XDSELRRSEEDEEKEEDIEVPKAXGDIFESLAGAIYXDSGXSLEVVWQVYYPXXQPLIEK 193
Query: 775 ETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKE 831
+ + P REL E + + K + A R +GK VTVEV G K
Sbjct: 194 FSANVPRSPVRELLEXEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYR 247
Query: 832 TAKKVASKEVLKSLKAS 848
AK A++ L+SLKA+
Sbjct: 248 IAKSAAARRALRSLKAN 264
>gi|296424770|ref|XP_002841919.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638171|emb|CAZ86110.1| unnamed protein product [Tuber melanosporum]
Length = 1402
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 189/410 (46%), Gaps = 52/410 (12%)
Query: 403 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT--TKKCQE------------ 448
PS + R+ S L A + ++L + I LEAIT ++ E
Sbjct: 903 PSFITRIDSYLHAWEVCSLL------GMEIDVGVALEAITKDSENTHEHGSAQVSLQRGM 956
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G + E LE LGD FLK A S L+ Y E L VK+ +I N L + K+P +
Sbjct: 957 GSNYERLEFLGDCFLKLATSLSLYTAYHADDECELHVKRMVLICNRYLFTKAKEMKIPEY 1016
Query: 509 IRTEPFD-----PKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALI 563
I+T F PKM ++ G + + N K ++ R + K+++DV EALI
Sbjct: 1017 IQTAGFSRRTWYPKMKLLMGKGTTQH--------NSSKEEISHR--LADKSISDVCEALI 1066
Query: 564 GAFLSTGGENVGLIFLDRI--------GIKVDFVNVPYERQFQVQAERLVNVR---HLES 612
GA L G + + I + D+ N + +Q+Q ++R +E
Sbjct: 1067 GAALIDKGLDGATQIVTAILRTPEHSQKVWADYYNCYTKPAYQLQEPSPSHIRVAEDIEE 1126
Query: 613 LLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
L+ Y F+ P LL+ ALTH S + +P YQRLEFLGDAVLD + Y++ KYP P
Sbjct: 1127 LVGYKFKHPRLLISALTHPSLPFTWDRVP-SYQRLEFLGDAVLDLVCVRYMFQKYPHADP 1185
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN---ITVDSFERLSLESTFG 727
LT+ + A V+N + +V+ G H+ + L I + + + S +
Sbjct: 1186 QWLTEHKMAMVSNKFLGMVAVEMGFHRKLRRMGSVLDHAIREYEVDIQDAKANSNGAVDF 1245
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM 777
W S + PKAL D++E+ GA+FVDSG +V + + P T+
Sbjct: 1246 WTSLKAPPKALPDVLEAFIGAVFVDSGFQYNIVERLVNTFILPYFVDMTV 1295
>gi|302896162|ref|XP_003046961.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
gi|256727889|gb|EEU41248.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
Length = 1452
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 189/435 (43%), Gaps = 69/435 (15%)
Query: 384 CRIIMGPMSLS------TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSK 436
C +I+ P+ +S F F P+I+HR+ + L+ LD C M ++ IP
Sbjct: 915 CFVILEPLRVSPIPLDVAFMVMAF-PAIIHRIDAALIT-------LDACAMLDLPIPPVL 966
Query: 437 VLEAITTKKCQEGFH--------------LESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
LEA+T G H E LE LGDSFLK A + LF E
Sbjct: 967 ALEAMTKDSDNSGEHDEEQVNFQPGMGSNYERLEFLGDSFLKMATTISLFTLIPESDECG 1026
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI 542
V++ +I N L D KL +IR++ FD + W D L +
Sbjct: 1027 YHVERMILICNQNLFNHAVDRKLHEYIRSKAFDRRSW-----------YPDLPLKKGKAP 1075
Query: 543 YVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIF--LDRIGIKVDFVNVPYERQFQV 599
R + K++ADV EALIGA +LS G ++ L + R+ + +E F
Sbjct: 1076 KTEMRHNLADKSIADVCEALIGAAYLSGKGGSMDLAVKAVTRMVKSKNHKMEKFEDYFAA 1135
Query: 600 -------QAERLVNVRHL----ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 648
QAE VN R L + Y F+ P+LL A H S+ +P YQRLEFL
Sbjct: 1136 FKMPAWQQAEANVNQRRLVDCVADAVGYRFKWPALLRSAFKHPSWPYDPVPN-YQRLEFL 1194
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYK 708
GDA+LD I L+ ++P P LT+ + A +N VK LHKH+ + L
Sbjct: 1195 GDALLDMAIVDNLFQRFPQADPQWLTEHKMAMASNQFLGCLCVKLDLHKHLTSTTSSLIG 1254
Query: 709 WINITVDSFE-------------RLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGC 755
I+ E + ++ F W ++ PKA D++E+L GA+FVD+
Sbjct: 1255 QISSYASELELAEEDARQEAKANKTAMRKDF-WLRASAPPKAFADVMEALVGAMFVDAKY 1313
Query: 756 NKEVVFESIRPLLEP 770
+ VV +EP
Sbjct: 1314 DYTVVRNFFTRFIEP 1328
>gi|405960420|gb|EKC26346.1| Endoribonuclease Dicer [Crassostrea gigas]
Length = 1759
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 151/309 (48%), Gaps = 46/309 (14%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR- 608
+ K++AD VE+LIG +L++ G+ L F+ +G+KV +P +++ VQ L++++
Sbjct: 1428 IPDKSIADCVESLIGCYLTSCGKKAALKFMHWLGLKV----LPQKKKGMVQDTELLSLQC 1483
Query: 609 ------------------------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
LE + Y FRD S L++A TH SY + CYQR
Sbjct: 1484 PDSPLLVHVPDHNSILHRLLEGYDTLEQKIGYEFRDKSYLLQAFTHASYHYNTVTDCYQR 1543
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQ 704
LEFLGDA+LDY+IT +LY SPG LTD+RSA VNN+ +A +VK HK+ S
Sbjct: 1544 LEFLGDAILDYVITRHLYEDSCKYSPGVLTDLRSALVNNNIFAALAVKWDFHKYFKAISP 1603
Query: 705 ELYKWINITVDSFERLSLESTFGWE---------SETSFPKALGDIIESLSGAIFVDSGC 755
L+ I V + E + E PKALGDI ESL+GAI++DS
Sbjct: 1604 PLFGVIEKFVARQKEREDEIDLSDDEGEGEEEEHVELEVPKALGDIFESLAGAIYLDSKM 1663
Query: 756 NKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAPR--INGKAAVT 811
+ + V+ +++P I + + P REL E K P + GK VT
Sbjct: 1664 SLDTVWRVYYRIMKPQIDKYLLSIPKSPVRELLEM----EPETAKFEKPERTLEGKIRVT 1719
Query: 812 VEVHANGTL 820
V V G
Sbjct: 1720 VNVVTKGVF 1728
>gi|358366696|dbj|GAA83316.1| hypothetical protein AKAW_01431 [Aspergillus kawachii IFO 4308]
Length = 1404
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 160/345 (46%), Gaps = 29/345 (8%)
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G + E LE LGD FLK A S LF + E V + +I N L ++ +
Sbjct: 955 GRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVKKEIYKY 1014
Query: 509 IRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLS 568
IR+ F W G + DHS RK + + KT+ADV EALIGA L
Sbjct: 1015 IRSRGFSRHTWYPEG--LKLLQGKDHS----RKATTESKHALAEKTIADVCEALIGASLL 1068
Query: 569 TGGE---------------NVGLIFLDRIGIKVDFVNVP-YERQFQVQAERLVNVRHLES 612
+GG N +R + +P Y+R+ AE + R +E
Sbjct: 1069 SGGPEHRFDMAVKAVTTLVNSPSHMAERWKDYISLYTIPKYQRRAADGAE-IHLCRKVEE 1127
Query: 613 LLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
L+Y FR P+LL A TH SY ++P CYQRLEFLGD+++D + L+ +YP P
Sbjct: 1128 KLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQRLEFLGDSLIDMVCVEDLFARYPDRDP 1186
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG--- 727
LT+ + A V+N +VK GLH H+ + S L I + + ES
Sbjct: 1187 QWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAEGESESAVDY 1246
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
W PK L D++E+ GA+FVDSG N EV+ E R ++P
Sbjct: 1247 WTVTKDPPKCLPDMVEAYVGAVFVDSGFNFEVIEEFFRDHIKPFF 1291
>gi|121713724|ref|XP_001274473.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
gi|119402626|gb|EAW13047.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
Length = 1552
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 250/568 (44%), Gaps = 91/568 (16%)
Query: 342 CFDQELLLNGRRIFHAQNYLSKCRQEKQR---------EPSKISFELPPELCRIIMGPMS 392
C + +L + +N L K E+++ EP KIS +PP +
Sbjct: 990 CHWDQPVLQAELVRLRRNLLDKLTTEEKKIQTECFICAEPLKIS-AIPPSIA-------- 1040
Query: 393 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT--TKKCQE-- 448
ST +F P+I+ RL S L+++ + L ++ I + LEA+T + +E
Sbjct: 1041 -STCLAF---PAIITRLDSYLISIEACDEL------DLVIRSDYALEAVTKDSDNTEEHR 1090
Query: 449 ----------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
G + E LE LGD FLK A S LF + E V + +I N L
Sbjct: 1091 GQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFN 1150
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
++ +IR+ F +W D + DHS +K+ + + KT+ADV
Sbjct: 1151 TAKKRQIYRYIRSRSFSRHVWY--PDGLTLLQGKDHS----KKMLSQAKHALGEKTIADV 1204
Query: 559 VEALIGAFLSTGGE----NVGL----IFLDRIGIKV----DFVNVPYERQFQVQAERLVN 606
EALIGA L +GG ++G+ +F+D V +++ + +QV+
Sbjct: 1205 CEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAE 1264
Query: 607 VR---HLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRLEFLGDAVLDYLI 657
+E L Y FR P LL A+TH S + +P CYQRLEFLGD++LD +
Sbjct: 1265 TNLALQVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVP----CYQRLEFLGDSLLDMVC 1320
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
L++++P P LT+ + A V+N +VK G HKHI S L I V+
Sbjct: 1321 VEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYVEEI 1380
Query: 718 ERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV---FES-IRPLLEP 770
E ES W PK L D++E+ GAIFVDS + EV+ F++ I+P +
Sbjct: 1381 ETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQD 1440
Query: 771 MITPETM-RLQPA-----RELNEY-CQKHHFSMKKTVAPRING-KAAVTVEVHANGTLFK 822
M +T P R NE+ C ++ +K P I+G A V V + ++
Sbjct: 1441 MSIYDTFANKHPTTFLHNRLANEFGCT--NYCLKAGEMPAIDGMPAGVLAAVIVHNSVVS 1498
Query: 823 HTHADADKETAKKVASKEVLKSLKASFP 850
A + + AK AS+ L L P
Sbjct: 1499 EATASSSR-YAKIRASERALVVLDGLLP 1525
>gi|158706457|sp|A1CBC9.2|DCL1_ASPCL RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1534
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 250/568 (44%), Gaps = 91/568 (16%)
Query: 342 CFDQELLLNGRRIFHAQNYLSKCRQEKQR---------EPSKISFELPPELCRIIMGPMS 392
C + +L + +N L K E+++ EP KIS +PP +
Sbjct: 972 CHWDQPVLQAELVRLRRNLLDKLTTEEKKIQTECFICAEPLKIS-AIPPSIA-------- 1022
Query: 393 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT--TKKCQE-- 448
ST +F P+I+ RL S L+++ + L ++ I + LEA+T + +E
Sbjct: 1023 -STCLAF---PAIITRLDSYLISIEACDEL------DLVIRSDYALEAVTKDSDNTEEHR 1072
Query: 449 ----------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
G + E LE LGD FLK A S LF + E V + +I N L
Sbjct: 1073 GQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFN 1132
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
++ +IR+ F +W D + DHS +K+ + + KT+ADV
Sbjct: 1133 TAKKRQIYRYIRSRSFSRHVWY--PDGLTLLQGKDHS----KKMLSQAKHALGEKTIADV 1186
Query: 559 VEALIGAFLSTGGE----NVGL----IFLDRIGIKV----DFVNVPYERQFQVQAERLVN 606
EALIGA L +GG ++G+ +F+D V +++ + +QV+
Sbjct: 1187 CEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAE 1246
Query: 607 VR---HLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRLEFLGDAVLDYLI 657
+E L Y FR P LL A+TH S + +P CYQRLEFLGD++LD +
Sbjct: 1247 TNLALQVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVP----CYQRLEFLGDSLLDMVC 1302
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
L++++P P LT+ + A V+N +VK G HKHI S L I V+
Sbjct: 1303 VEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYVEEI 1362
Query: 718 ERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV---FES-IRPLLEP 770
E ES W PK L D++E+ GAIFVDS + EV+ F++ I+P +
Sbjct: 1363 ETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQD 1422
Query: 771 MITPETM-RLQPA-----RELNEY-CQKHHFSMKKTVAPRING-KAAVTVEVHANGTLFK 822
M +T P R NE+ C ++ +K P I+G A V V + ++
Sbjct: 1423 MSIYDTFANKHPTTFLHNRLANEFGCT--NYCLKAGEMPAIDGMPAGVLAAVIVHNSVVS 1480
Query: 823 HTHADADKETAKKVASKEVLKSLKASFP 850
A + + AK AS+ L L P
Sbjct: 1481 EATASSSR-YAKIRASERALVVLDGLLP 1507
>gi|408393408|gb|EKJ72672.1| hypothetical protein FPSE_07072 [Fusarium pseudograminearum CS3096]
Length = 1510
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 191/425 (44%), Gaps = 68/425 (16%)
Query: 384 CRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSK 436
C +I+ P+++S + F P+I+HR+ S L+A LD C + +++IP +
Sbjct: 972 CFVILEPLNVSPLPIDVVSMALKF-PAIIHRIDSALIA-------LDACELFDLSIPPAL 1023
Query: 437 VLEAITTK--------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
LEA+T + G + E LE LGDSFLK A + +F +E L
Sbjct: 1024 ALEAMTKDSDNTEDHGKQQINFQAGMGSNYERLEFLGDSFLKMATTISIFVLKPKSNECL 1083
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI 542
V++ +I N L D KLP +IR+ FD + W + +L +
Sbjct: 1084 YHVERMLLICNNNLFNTAVDCKLPEYIRSLAFDRRTW-----------YPNLTLRKGKAF 1132
Query: 543 YVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIF-----LDRIGIKVDFVNVPYERQ 596
T R+ + K++ADV EALIGA +LS+ +N+ + + + Y
Sbjct: 1133 KTTTRQCLADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMAYDEYYAS 1192
Query: 597 FQV----QAERLVNVRHL----ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 648
F+V +A N R L + Y F+ LL A TH SY YQRLEFL
Sbjct: 1193 FKVPDWQKASPNANQRRLVQKVADAIGYHFKSAPLLQSAFTHPSYTYSGNVPNYQRLEFL 1252
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYK 708
GDA++D I YLY +P P LT+ + A +N VK LH H+L + +
Sbjct: 1253 GDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQFIS 1312
Query: 709 WINITVDSFERLSLESTFG-------------WESETSFPKALGDIIESLSGAIFVDSGC 755
I V E L+ E+ W + T+ PKA D IE+L GA+FVDS
Sbjct: 1313 KIRDYVAELE-LAEETARQEAKEDGTPMRMDFWLNATTPPKAYADSIEALIGAMFVDSEF 1371
Query: 756 NKEVV 760
+ VV
Sbjct: 1372 DYSVV 1376
>gi|307195788|gb|EFN77602.1| Endoribonuclease Dcr-1 [Harpegnathos saltator]
Length = 1807
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 166/362 (45%), Gaps = 74/362 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI------KVDFVN-----------VP 592
+ K++AD VEALIGA+L G L+F+ +GI +V V+ +P
Sbjct: 1445 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEVQIVSEDEPEERIPGSIP 1504
Query: 593 YERQFQVQAE-------------------------------RLVNVRHLESLLNYSFRDP 621
Y ++ E L LE + Y FRD
Sbjct: 1505 YVKETSEHGEIVWTQIRYGKLEEPQNPLLRYIPDPEGELCMMLDGYEELEKSIGYKFRDS 1564
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1565 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALV 1624
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE---------- 731
NN +A +V+ G HK+ H S L ++ ++ F R+ E+ E
Sbjct: 1625 NNTIFASLAVRCGFHKYFRHLSPGL----SVVINRFVRIQEENGHSISEEYYLIGKEECE 1680
Query: 732 ----TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAREL 785
PKALGD+ ESL+GAI++DSG + + V+ +++ I + + P REL
Sbjct: 1681 EAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIREL 1740
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V G+ FK + AK A+K LK
Sbjct: 1741 LELEPETAKFGKPEKLAD--GRRVRVTVDVFGKGS-FKGIGRNY--RIAKCTAAKCALKK 1795
Query: 845 LK 846
LK
Sbjct: 1796 LK 1797
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1273 SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1332
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1333 NLYRLGRQKMLGESMIATKFEPHDNWLPP 1361
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1272 PSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1328
Query: 681 VNN 683
V+N
Sbjct: 1329 VSN 1331
>gi|390601319|gb|EIN10713.1| ribonuclease III [Punctularia strigosozonata HHB-11173 SS5]
Length = 704
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 208/464 (44%), Gaps = 65/464 (14%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
L P+LC P S+ F + ++PS+ R+ +LL L +L + +L
Sbjct: 149 LIPQLCPKFSIPASI--FKTGLYLPSLARRIDEMLLVKELNAEILHDL-----VGEQLLL 201
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EAIT F+ E LE LGD+FLKY AS ++ T Q EG L + ++I+N L
Sbjct: 202 EAITPPSASAEFNYERLELLGDAFLKYLASVYVYVTRQGG-EGALHNARQKLIANDYLMD 260
Query: 499 LGCDHKLPGFIRTEPFDPKMWMI--------PGDN---SGSYELNDHSLFNERKIYVTG- 546
LP +I++ F K W P D+ S + N E K G
Sbjct: 261 CAVRVGLPPYIQSAAFAYKYWAPHNVRVLARPTDDMTCGPSQDANGEKSIEEPKKEDAGI 320
Query: 547 --RKKVK----------SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------D 587
++K K K +ADVVEA+IGA GG + L + +GI + D
Sbjct: 321 PSKRKAKFDPNTSQWLGHKAIADVVEAIIGAAYLNGGSDNALQTVLDLGIDLSGISSWTD 380
Query: 588 FVNV----PYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ 643
F + P Q + ++ +V L +L D LL AL G + +P Q
Sbjct: 381 FRRLSASDPGHPQLVLPSQSVV---ELSRILGRPVNDRQLLAHALACGG-LTGAVPILRQ 436
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL-HA 702
RLEFLGDA+L+YL+ YLY+K + SPG L+ + V+ND A V G+++H+L
Sbjct: 437 RLEFLGDAILEYLLIRYLYSKNQSSSPGILS---AGMVSNDALAALCVTSGIYEHLLVDR 493
Query: 703 SQELYKWI----------NITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVD 752
ELY+ ++ R L S + + PK L D +E+ GA++V
Sbjct: 494 RSELYRTTQNYRKLILQRQQAENAAARAELRSPGQFWHDVPAPKVLSDAMEATLGALYVS 553
Query: 753 SGC---NKEVVFESI-RPLLEPMITPETMRLQPARELNEYCQKH 792
G ++VFE + +P + +T +T+ P + L E QK
Sbjct: 554 DGFTADGTQIVFERLFKPFYDRHVTLQTLSHHPNKILAELLQKQ 597
>gi|242018047|ref|XP_002429494.1| dicer-1, putative [Pediculus humanus corporis]
gi|212514432|gb|EEB16756.1| dicer-1, putative [Pediculus humanus corporis]
Length = 2179
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 163/362 (45%), Gaps = 78/362 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF-----------Q 598
+ K++AD VEALIGA+L G L+F+ +GIKV +P E +F
Sbjct: 1813 IPDKSIADCVEALIGAYLVACGPRGALLFMSWLGIKV----LPKEEKFFESENDPDIKKG 1868
Query: 599 VQAERLVNVR---------------------------HLESLL----------NYSFRDP 621
V A R + V LE LL Y FRD
Sbjct: 1869 VGASRPIKVMTNNGEVTFGKLKSPKRPLICHIPNPEGELEKLLRGFDIFEESIKYRFRDR 1928
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++ALTH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1929 SYLLQALTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRHHSPGALTDLRSALV 1988
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE------------ 729
NN +A +V+H HK+ H L +N VD F R +
Sbjct: 1989 NNTIFASLAVRHDFHKYFRH----LCPSLNEVVDRFVRFQQANGHAISEEFYLIEEEECE 2044
Query: 730 --SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAREL 785
+ PKALGD+ ES++GAIF+DSG + + V+ +++ I + + P REL
Sbjct: 2045 EAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRIMKNEIELFSTNVPKSPIREL 2104
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + V+VEV G + AK A+K LK
Sbjct: 2105 FELEPETAQFGKPEKLAD--GRRVRVSVEVFGKGIF---NGIGRNYRIAKCTAAKCALKQ 2159
Query: 845 LK 846
LK
Sbjct: 2160 LK 2161
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ Y+N HEG LS + + +SN
Sbjct: 1640 SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLRSKQVSNF 1699
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1700 NLYRLGRKKMLGESMVATKFEPHDNWLPP 1728
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1639 PSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLRSKQ 1695
Query: 681 VNN 683
V+N
Sbjct: 1696 VSN 1698
>gi|426200573|gb|EKV50497.1| hypothetical protein AGABI2DRAFT_64825 [Agaricus bisporus var.
bisporus H97]
Length = 1717
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 224/514 (43%), Gaps = 65/514 (12%)
Query: 377 FELPPELCRIIMG--PMSLSTFYSFTFVPSIMHRLQSLLLAVNLK-NMLLDHCMQNVTIP 433
F++PP + G MS F +P++ H++ A + + N+ L IP
Sbjct: 910 FKVPPIVPMNTCGWVDMSPDVIRGFEILPTLCHKITDAYRAQSTRLNIGLPF------IP 963
Query: 434 TSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISN 493
++EA+T F + LETLGD+ L + L Y HEG LS + +SN
Sbjct: 964 DDLLMEALTLPNVDADFSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQLSTLRAGRVSN 1023
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
L +L FI +E + W P YE+ + + N + + ++++ +
Sbjct: 1024 KFLVSCARTVELERFISSEKMGVEKW--PFVEQKGYEVKE--IRNRKSV----KRQIPRR 1075
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL---VNVRHL 610
+ D VEAL+GA GG + L G+ + ER + +A + V L
Sbjct: 1076 GLQDCVEALLGASFLAGGIPMALRTGVCFGLSFGGIQPWGERCRRAEAREIGVPALVAGL 1135
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E + Y F +P LLVEA+TH S P YQRLEFLGD+V+ L+T YLY+K+P +
Sbjct: 1136 EKEIGYVFENPELLVEAVTHPSLEFSSTP-SYQRLEFLGDSVIKMLVTEYLYHKFPKATS 1194
Query: 671 GDLTDMRSASVNNDCYALSSV-KHGLHKHILHASQELYKWINITVDSFERLSLESTF--G 727
L R+ ++ + A ++ K +HK++L S +L IN+ V E + + G
Sbjct: 1195 HQLALPRTKAICSPALAHIAIRKLHIHKYLLQNSIDLNNAINLYVPVLESATADEIVRRG 1254
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKE-------VVFESIRPLLEPMITPETMRLQ 780
W + PKA+ D ES+ GA+FVD G + + + E I +L P I +
Sbjct: 1255 WRYDP--PKAISDAFESVVGAVFVDVGYDLDRTGGIVCRLMEDILEVLNPSIPKD----- 1307
Query: 781 PARELNEY-----CQKHH---------------------FSMKKTVAPRINGKAAVTVEV 814
P E+ E+ C K H F ++ R NG+A +V
Sbjct: 1308 PVSEVLEWLASVGCSKGHNLKFKCVKTFKLIICTHEEFIFLFRRNTEER-NGQAVESVSA 1366
Query: 815 HANGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
+G + K ++ ++ +L+AS
Sbjct: 1367 VFHGQIVAGPIVSNSKAVSRFAVAERAFMALRAS 1400
>gi|334283448|gb|AAR82738.2| SD11113p [Drosophila melanogaster]
Length = 1701
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1171 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1230
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1231 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLA 1290
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1291 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1350
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1351 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1410
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1411 NHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1470
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1471 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1530
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1531 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1590
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1591 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1647
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1648 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1696
>gi|80979097|gb|ABB54751.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHSYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979093|gb|ABB54749.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHSYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979089|gb|ABB54747.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDVNYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHSYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979091|gb|ABB54748.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHSYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979085|gb|ABB54745.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHSYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|22026807|ref|NP_523778.2| Dicer-2 [Drosophila melanogaster]
gi|21627058|gb|AAF57830.2| Dicer-2 [Drosophila melanogaster]
gi|342672109|gb|AEL30809.1| FI15132p1 [Drosophila melanogaster]
Length = 1722
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1192 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1251
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1252 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLA 1311
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1312 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1371
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1372 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1431
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1432 NHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1491
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1492 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1551
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1552 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1611
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1612 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1668
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1669 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1717
>gi|80979099|gb|ABB54752.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHSYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979087|gb|ABB54746.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|195996297|ref|XP_002108017.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
gi|190588793|gb|EDV28815.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
Length = 707
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 145/542 (26%), Positives = 240/542 (44%), Gaps = 85/542 (15%)
Query: 292 NSVVCTPHSG----QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQEL 347
N++V + G + ++++ V ++ +S FT D + TY ++Y+ +Y I + +
Sbjct: 103 NAMVARNYRGLDTLEWFFVSNVCSDMSPSSKFTNPDVAS-TYSEYYKIKYDIDIQDANQP 161
Query: 348 LLNGRRIFHAQNYLSKCRQEKQ---------REPSKISFELPPELCRIIMGPMSLSTFYS 398
LL R L +Q + S L PELC I + P L ++
Sbjct: 162 LLEVARFKKMHITLLNAKQSGSITHDIRTLSVNSNSNSIVLIPELCLIHVIPAEL--WFL 219
Query: 399 FTFVPSIMHRLQSLLLAVNLKNML-----------LDHCMQNVTIPTSKVLEAITTKKCQ 447
++ +++R++S+LLA L+ +L +D+ + V +LEAIT Q
Sbjct: 220 SQYLALVLYRVESILLAFELRELLRSQANICDIYSVDYLITAVGSAKPCLLEAITLSSAQ 279
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDR---IISNAALCKLGCDHK 504
+ F+LE LE LGD +L Y + T H ++ +R + N L +LG +
Sbjct: 280 DHFNLERLEFLGDRYLNYKIT---LTTLLEHPSWSINEVINRMRFLTKNKKLFRLGAGRR 336
Query: 505 LPGFIRTEPFDP-KMWMIPG--DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEA 561
+P +I PF+ K W+ PG N EL S+ R+ + + K +AD VE
Sbjct: 337 IPYYIVGCPFNQNKSWVPPGFVINQTVSEL---SIAMSREY---THQPLTKKAIADCVEG 390
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYERQFQVQAERLVNV 607
LIG G N L F+ +G ++ DF Y
Sbjct: 391 LIGYLCLVCGRNSVLRFMRWLGFEISECLDGIQELIPSIDFRTNLYSE----------TA 440
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
+E++LNYSFR+ SLL+ ALTH SY E Y++L FLGD +L Y I ++LY +Y
Sbjct: 441 NSVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTLLIYQICLFLYTQYTD 499
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN-----ITVDSFERLS- 721
P D + N Y + ++ L K +LH S+EL I+ + D + S
Sbjct: 500 YQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADDVQSFSS 559
Query: 722 -LESTFGWESETSF-----------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
++S ++ +T+ PK LGD ++ A+F+D+ +++ I LL
Sbjct: 560 TVQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPDEDTAGRIINSLLN 619
Query: 770 PM 771
P+
Sbjct: 620 PI 621
>gi|80979105|gb|ABB54755.1| Dicer-2 [Drosophila simulans]
gi|80979109|gb|ABB54757.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 192/470 (40%), Gaps = 117/470 (24%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1187 GEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNR 1246
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHS 535
L D +P + T F P+ +P S G + L D +
Sbjct: 1247 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLA 1306
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1307 LDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLE 1366
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P ++ L+
Sbjct: 1367 ALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLI 1426
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1427 NHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1486
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL +++L K++N V
Sbjct: 1487 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVT 1546
Query: 716 SFERLSLEST-----------------------------------FGWESETSFPKALGD 740
++ + LE F + PK LGD
Sbjct: 1547 NYVHILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGD 1606
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET--MRLQPARELNEY 788
++E+L AI++D + + +E I L EP + T M + P R+L E+
Sbjct: 1607 VLEALIAAIYLDCR-DLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIEH 1655
>gi|195995859|ref|XP_002107798.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
gi|190588574|gb|EDV28596.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
Length = 1418
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 189/802 (23%), Positives = 339/802 (42%), Gaps = 127/802 (15%)
Query: 53 PNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQKHGNEPYD 112
P I+ + Q K K+ + LEACK LH++G +TDNL P+V K + +
Sbjct: 644 PEKTTIEGPMMQSK-KIAKKASALEACKFLHEVGEITDNLEPNVGKYHQSIDKSQYKQF- 701
Query: 113 AEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP----AHDIVLAVRTELESEIK 168
PI FP L H IELK + I + D L +T+L EI+
Sbjct: 702 ---PIKFPDNLSMPIEDGDNFYLHMIKIELKNSTIESIDTVSCSSDFGLICKTKLH-EIE 757
Query: 169 KVNFDLEVDRGRLTVNLKHLG-KIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGL 227
L+ G + +L+ L + + D++ L +F LF N+ + I +
Sbjct: 758 PTY--LQTSCGDILFSLQSLAVPMHYSCDELSLISKFVEYLFT-----NITPCSTITDLI 810
Query: 228 WLRDNLEIDYLLLP-------ASEQSIDWEPVASL-------SFPCDIGLKHHKNCSTMS 273
+ N Y+++P S SI++E +A+L F ++G C ++
Sbjct: 811 YDPTNSYAKYMIVPLNYAKSSRSMYSINFELMATLLKPRKYWPFASNLG----DGCKNVN 866
Query: 274 NARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHY 333
+ +V+ G T + +Y + + L+ S F + +TYK +Y
Sbjct: 867 DLLIVKNY-GHWVTNQV-----------DVYALRNICYDLSPLSRFPTDK--RLTYKAYY 912
Query: 334 EERYGIQLCFDQELLLNGRRIFHA------QNYLSKCRQEKQREPSKISF-ELPPELCRI 386
+Y ++ + L + + +N +S C + + S F L PELC
Sbjct: 913 HRKYHTRIENSNQPLFAVKTLHRFPVALVHENCISPCNNTTESKKSNSGFVHLVPELC-- 970
Query: 387 IMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNML-LDHCMQNVTIPTSK--------- 436
++ P S S + F+P +++++ LA + + + ++ VT P K
Sbjct: 971 LVHPFSASMWMLSQFLPLTLYKIEKNCLAYEMIDYIQCASILKKVTEPRRKKLLLRETTN 1030
Query: 437 ----VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
+ +++T +E + ++ +G F+K + L++T + + L++K+ + S
Sbjct: 1031 LVDRITQSLTLPIAEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSS 1090
Query: 493 NAALCKLGCDHKLPGFIRTEPFDP-KMWMIPG--------DNSGSYELNDHSLFNERKIY 543
L L +P +I ++PF+ K W+ PG D+S S D +L I
Sbjct: 1091 EFYLFNLAAKTNIPSYIISKPFNQLKCWIPPGFTFSIRCKDDSSS----DSALAERTIIE 1146
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FVNVPYERQFQVQAE 602
+ K++A+ + A++GA L E GL FL +G ++ F ++ F V E
Sbjct: 1147 SITDNFLSVKSIAECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSI--SNGFDVWNE 1204
Query: 603 RLVN-------------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
++ + + E L Y F + L+ A TH S + Y++LEF+G
Sbjct: 1205 KITHMIEESNSQSWLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGD-SFNYEKLEFVG 1263
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMR---SASVNNDCYALSSVKHGLHKHILHASQEL 706
D++L+YL+ YL+ + D+T + +++N+ Y L S + H H+ + S +
Sbjct: 1264 DSILNYLVIKYLF----LATDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQSPFV 1318
Query: 707 YKWI----NITVDSFERLSLE---STFGW---------ESETSFPKALGDIIESLSGAIF 750
+ I T D E S+ + W + + S PK L D+ ESL+ AI+
Sbjct: 1319 KEMILGFEKKTADLLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLAAAIY 1378
Query: 751 VDSGCNKEVVFESIRPLLEPMI 772
DSG N V+ LL+P +
Sbjct: 1379 FDSGQNLSTVWNIYSNLLKPFL 1400
>gi|80979095|gb|ABB54750.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 219/532 (41%), Gaps = 127/532 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1185 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1244
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1245 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLA 1304
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1305 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLE 1364
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1365 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1424
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1425 NHFYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1484
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1485 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1544
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1545 NYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKA 1604
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H +
Sbjct: 1605 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH-AKP 1661
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHT----HADADKETAKKVASKEVLKSL 845
+P + G+ TV V T + T ++K+ AK A+K L+ L
Sbjct: 1662 VFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|388857965|emb|CCF48410.1| related to cell cycle control protein dicer [Ustilago hordei]
Length = 1752
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 158/563 (28%), Positives = 244/563 (43%), Gaps = 77/563 (13%)
Query: 299 HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQ------------E 346
HS +Y + L NS + G +H + Q D+ +
Sbjct: 1021 HSHSLYQFESIRSDLCPNSPLSSGAAGETYLTQHMKMYARHQASADEHEVEVLAAQLANQ 1080
Query: 347 LLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPP---ELCRII------MGPMSLSTFY 397
LL+ R++ N LS P ISF P + R+I + P+ +
Sbjct: 1081 PLLSVRKLPKISNLLSP--------PPSISFSATPATTQGARLIVPYFYALHPLPSTLLR 1132
Query: 398 SFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLET 457
S +PSI R LLLA N LL+ + N KVLEA+T+ F E LE
Sbjct: 1133 SILLLPSIFTRYDQLLLAQACNNDLLEGRLDN-----DKVLEALTSPSAGSAFDYERLEF 1187
Query: 458 LGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK----LGCDHKLPGFIRTEP 513
LGD+FLK A+ F T+ E L + I++N L K LG + + +
Sbjct: 1188 LGDTFLKLIATCHTFTTHLGRTEAELHMANKGIVTNVRLLKEAKRLGLEKY--AILPSCN 1245
Query: 514 FDPKMWMIPGD-NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA---FLST 569
P+ + P N G ND S+ ++ ++ V VK KT++D+VE+LIGA S+
Sbjct: 1246 LLPRRFTAPVICNVGGALTNDPSMDHDGQVDV-----VKEKTLSDIVESLIGAALLSPSS 1300
Query: 570 GGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERL--VNVRHLESLLNYSFRDPSLLVEA 627
+ F + V ++R + + RL ++RHL+SL ++++R P L +E+
Sbjct: 1301 SSPSSSSPFFLLPFLSFLHVYCAFQRNW---SSRLNPPSLRHLQSLFSHTYRYPHLALES 1357
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK---YPTLSPGDLTDMRSASVNND 684
TH S + +P YQRLEFLGDA +D+ I +Y + L PG++T ++ +N
Sbjct: 1358 FTHPSLLASILP-SYQRLEFLGDAWIDFFIVSRIYTEGGGLVVLDPGEMTALKGVLASNA 1416
Query: 685 CYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG----WESE--TSFPKAL 738
+ VK GLHK I S L + I E++ L G W PKA+
Sbjct: 1417 ALSALGVKLGLHKFIASNSAVLVESIAKYGKGLEKV-LRKGGGEGQYWTKAGMVQVPKAV 1475
Query: 739 GDIIESLSGAIFVDSGCNKEV---VFESI-RPLLEPMITPETMRLQPARELNEYCQKHHF 794
D++E+ +I VDSG +++ VF I P + E +R+ + + EY
Sbjct: 1476 ADVVEASFASIVVDSGFDQDTAQRVFGRIFTPFYDEHCKWEDLRVGEVKRVIEYL----- 1530
Query: 795 SMKKTVAPRINGKAAVTVEVHAN 817
+ R G V +EV N
Sbjct: 1531 ---SSCFKRRGGGGGVMLEVSTN 1550
>gi|357118011|ref|XP_003560753.1| PREDICTED: ribonuclease 3-like protein 3-like [Brachypodium
distachyon]
Length = 296
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 136/246 (55%), Gaps = 9/246 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP--RCYQRLEFLGDAVLDYLITVYLYN 663
+V +E+LL Y F D SL+ EALTHGSY P P Y+RLE+LGD VL L++ ++
Sbjct: 37 DVAAVETLLGYEFGDKSLVGEALTHGSYYYPYPPGDSTYERLEYLGDGVLTCLMSREVFL 96
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
Y +L PG LT +R+A+V+ + A +V+HG+H+ + H + +L + +D F + +
Sbjct: 97 TYRSLPPGPLTRLRAANVDKEKLARVAVEHGIHRFLRHKAPQL----DGQIDDFIKELCK 152
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
+ PK L DI+ESL GAI++DS N+EVV+ R L +P+I+ ET+ P
Sbjct: 153 YKYHSNGLLDAPKVLSDIVESLIGAIYLDSNFNQEVVWRVFRNLADPLISLETLGKHPVS 212
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E+CQK ++ + + V+V +G L KE A+ A+K L
Sbjct: 213 ELLEFCQKTRRGLQFV---KDGWDKHLKVDVLVDGELLGTATYAQKKEIAQNRAAKAALD 269
Query: 844 SLKASF 849
LK +
Sbjct: 270 KLKETL 275
>gi|80979115|gb|ABB54760.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 192/470 (40%), Gaps = 117/470 (24%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1187 GEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNR 1246
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHS 535
L D +P + T F P+ +P S G + L D +
Sbjct: 1247 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLA 1306
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1307 LDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLE 1366
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P ++ L+
Sbjct: 1367 ALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLI 1426
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1427 NHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1486
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL +++L K++N V
Sbjct: 1487 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVT 1546
Query: 716 SFERLSLEST-----------------------------------FGWESETSFPKALGD 740
++ + LE F + PK LGD
Sbjct: 1547 NYVHILLEEADVQPTPLDLDDELELPHANKCISQKAEQGVPPKGEFNISTNVDVPKTLGD 1606
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET--MRLQPARELNEY 788
++E+L AI++D + + +E I L EP + T M + P R+L E+
Sbjct: 1607 VLEALIAAIYLDCR-DLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIEH 1655
>gi|358397707|gb|EHK47075.1| hypothetical protein TRIATDRAFT_291296 [Trichoderma atroviride IMI
206040]
Length = 1507
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 186/403 (46%), Gaps = 69/403 (17%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT-SKVLEAITTKKCQEGFHLESLETLG 459
+P+I+H L +L+A L +L + V I V EAI + E + E LE LG
Sbjct: 1009 IIPTIIHELGVMLMAKELATTVL----EPVGISDWGLVREAICARSANEPMNYERLEFLG 1064
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LK Q T + EG LS +DR+ISN L + D +LP F+ T+PF W
Sbjct: 1065 DSILKLCTCIQAAVTKPDWPEGYLSYWRDRLISNVRLYQAAVDFRLPRFLVTKPFTGHKW 1124
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG----ENVG 575
L + E T +++ +KT+ADVVEALIGA GG E
Sbjct: 1125 R---------PLYLEDVLQEDVNAPTTERRLSTKTLADVVEALIGASYCEGGIAMAEKCI 1175
Query: 576 LIFLDRI-------GIKVDFVNVPYERQFQVQAERLVNV-RHLESLLNYSFRDPSLLVEA 627
+FL I G ++ F VP ERL + LE LL Y+F+ +LL EA
Sbjct: 1176 AMFLSEIDWDGIDKGREILFNRVP-------PNERLPPILEPLERLLGYTFQRKALLTEA 1228
Query: 628 LTHGSYMLPEI----PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
LTH S+M + R +R+EFLGDAVLD++I ++ P L + +++ VN
Sbjct: 1229 LTHASFMADGVMDHGKRSLERMEFLGDAVLDHVIVTRIFEVRPELPHYTMHTLKTGLVNG 1288
Query: 684 DCYALSSVKHGLHKHILHASQE-----------LYKWINITVDS--FERLSLESTFG--- 727
D A +++HGL ++E L++++ +S E+L+ +
Sbjct: 1289 DFLAFMTMEHGLKSMETVVTEEGSVENQETHTYLWQFMRHAANSIGIEQLATATRHAALR 1348
Query: 728 ------WESETSFPKAL----------GDIIESLSGAIFVDSG 754
E+ +P AL D+ E++ GA++VDSG
Sbjct: 1349 AEILDVMENGAHYPWALLAALNPKKFYSDLFEAVLGAVWVDSG 1391
>gi|342879789|gb|EGU81025.1| hypothetical protein FOXB_08500 [Fusarium oxysporum Fo5176]
Length = 580
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 201/430 (46%), Gaps = 74/430 (17%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
VLEA+++ +E + LE LGDS LK+ Q + + + EGLL+ KDR++SN L
Sbjct: 10 VLEAVSSPSAREPVDYQRLEFLGDSILKFCTVTQAYSEHPSWPEGLLNHFKDRLVSNERL 69
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNE----RKIYVTGRKKVKS 552
++ + L FI ++PF W L+D + E R V G S
Sbjct: 70 QRVCLEKGLSKFILSKPFTALKWR-------PRYLDD--ILKEKSAPRPAPVDG-----S 115
Query: 553 KTVADVVEALIGAFLSTGGENVGL----IFLD------RIGIKVD--FVNVPYERQFQVQ 600
KT+ADVVEALIGA GG L +FL + G+ D F P + Q
Sbjct: 116 KTLADVVEALIGASYQDGGLTKALKCISVFLGDSCNWHQEGVARDILFAAAPSDVQLP-- 173
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
N+ LE L+ Y F+ SLL+EA+THGSY + Y++LEFLGDA+LDY++
Sbjct: 174 ----SNLEPLEDLIKYKFKKKSLLIEAVTHGSYAAAMQEKSYEQLEFLGDAILDYIVVTK 229
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE-----------LYKW 709
++ P + G L +++A VN + +L ++ + + + L + L+K+
Sbjct: 230 MFQHDPPIPTGRLHMIKTAIVNGEFLSLVNLVNSIQRKDLEVRPDGELVTKTTALPLWKF 289
Query: 710 I--------NITVDS---FERLSLESTFGWESETSFPKAL----------GDIIESLSGA 748
+ N+ V++ FE + E + +P AL D+ E+L GA
Sbjct: 290 MRFNSSEMANVMVETEEKFESMRRELVIALWGDGHYPWALLARLHPQKFYSDMFEALLGA 349
Query: 749 IFVDSGCNKEV--VFESIRPL--LEPMITPETMRLQPARELNEYC--QKHHFSMKKTVAP 802
++VDSG +E V E+ + + LE +I + P EL+++ QK ++ P
Sbjct: 350 VWVDSGSIEECTRVLETFQVMDYLEFVIKEDIHVQHPKEELSKFADRQKMKYTTTLIEEP 409
Query: 803 RINGKAAVTV 812
VT+
Sbjct: 410 EPRWSCGVTI 419
>gi|303314275|ref|XP_003067146.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106814|gb|EER25001.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1487
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 184/415 (44%), Gaps = 80/415 (19%)
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK--VLEAITTK-------KCQE------- 448
I+ R++S L+A L+ C Q + +P S LEA+T + Q+
Sbjct: 992 IISRIESYLIA-------LEAC-QELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGM 1043
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G + E LE LGD FLK A S LF ++ E VK+ ++ N L K KL F
Sbjct: 1044 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYEF 1103
Query: 509 IRTEPFDPKMW--------MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
IR++ F + W G + G+ E N H+L + KT+ADV E
Sbjct: 1104 IRSQSFSRRGWYPEGLTLLQGKGQSKGATE-NKHALAD--------------KTIADVCE 1148
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-------------PYERQFQ--------V 599
ALIGA +N R I V V Y R + V
Sbjct: 1149 ALIGACCLLASKN------HRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSLPKYQTAVV 1202
Query: 600 QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLI 657
A L ++ L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD
Sbjct: 1203 DAAELDLAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMAC 1261
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
++Y+K+P P LT+ + A V+N +V+ GLH H+ H S L I V+
Sbjct: 1262 VEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEI 1321
Query: 718 ERLSLEST---FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
E LES W + PK L D++E+ GAIF+DS + EVV E + L+
Sbjct: 1322 EAAELESGDSPDAWTLTSDPPKCLPDMVEAYIGAIFIDSNFSFEVVEEFFQKFLK 1376
>gi|359485630|ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-like [Vitis vinifera]
gi|297739192|emb|CBI28843.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 6/197 (3%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
AE ++ +E +L YSF + LL EA TH S + Y+RLEF+GD+VL LIT
Sbjct: 24 AESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQF--SYERLEFMGDSVLSLLITKE 81
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
+ YP L PG LT +RSA+V+ + A ++KHGLH+ + H ++ + I ++ +
Sbjct: 82 QFFLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEY 141
Query: 721 SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ 780
L S + PK L D++ES GA+FVD C+ + V++ + LLEPMI PET+++
Sbjct: 142 PLHSN----GQIEVPKVLADVVESTIGAVFVDCNCSVDTVWKVFKGLLEPMIVPETLKVH 197
Query: 781 PARELNEYCQKHHFSMK 797
P ELNE CQK ++
Sbjct: 198 PVTELNERCQKRGLKLE 214
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 439 EAITTKKCQEG-FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
EA T CQ+ F E LE +GDS L +++ F Y + G L+ + + L
Sbjct: 49 EAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQFFLYPDLQPGRLTRLRSANVDKEKLA 108
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
++ H L F+R + P YE + E ++ G+ +V K +AD
Sbjct: 109 RVALKHGLHRFLRHKK--------PKIEQQIYEFAE--AIKEYPLHSNGQIEV-PKVLAD 157
Query: 558 VVEALIGA 565
VVE+ IGA
Sbjct: 158 VVESTIGA 165
>gi|80979101|gb|ABB54753.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 191/470 (40%), Gaps = 117/470 (24%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK A+ L Y + +EG L+ K +++SN
Sbjct: 1187 GEFLAAITASSATDVFDMERLEILGDSFLKLCATLYLASKYSDWNEGTLTQVKSKLVSNR 1246
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHS 535
L D +P + T F P+ +P S G + L D +
Sbjct: 1247 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLA 1306
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1307 LDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLE 1366
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P ++ L+
Sbjct: 1367 ALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLI 1426
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1427 NHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1486
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL +++L K++N V
Sbjct: 1487 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVT 1546
Query: 716 SFERLSLEST-----------------------------------FGWESETSFPKALGD 740
++ + LE F + PK LGD
Sbjct: 1547 NYVHILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGD 1606
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET--MRLQPARELNEY 788
++E+L AI++D + + +E I L EP + T M + P R+L E+
Sbjct: 1607 VLEALIAAIYLDCR-DLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIEH 1655
>gi|169768544|ref|XP_001818742.1| ATP-dependent helicase dcl2 [Aspergillus oryzae RIB40]
gi|121804870|sp|Q2UNX5.1|DCL2_ASPOR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|83766600|dbj|BAE56740.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868391|gb|EIT77606.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1377
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 191/419 (45%), Gaps = 70/419 (16%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEA 440
E C + P+S + F F+P I+ RL+S L+A L +L D ++ V+ A
Sbjct: 881 ESCTVDKLPVSTAIFG--LFIPHIVDRLESTLIANRLCATILCDVGFADI----QHVITA 934
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I Q + + E LGDS LKY S QLF N EG L+ + I+ N L +
Sbjct: 935 IMAPSAQGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAA 994
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L FI T+ P+ W+ P L + R ++++ +K +ADV+E
Sbjct: 995 LDAGLDSFIITKALTPRRWIAP-------------LISTRVGAAPVKRQMSAKVLADVIE 1041
Query: 561 ALIGAFLSTGGENVGLI----FLDRIGIKVDFVNVPYERQFQVQAERLVNVRH-----LE 611
ALIGA GG + I FL + + +++P Q E RH L+
Sbjct: 1042 ALIGAAYLDGGHSKAQICTHCFLPEVNRQP--LDIP---SLITQTEHGRTARHIIDGDLQ 1096
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
L Y+F++ LL+EALTH S + + YQRLEFLGDA+LD +I ++ +SPG
Sbjct: 1097 RHLGYTFKNEDLLIEALTHPSCQHDQTTQSYQRLEFLGDAILDMVIVPIIFQYSNKISPG 1156
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKWI------ 710
D+T ++ A VN + ++ + + + EL++++
Sbjct: 1157 DMTLIKHAVVNANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLD 1216
Query: 711 -----NITVDSFERLS---LES-----TFGWESETSF--PKALGDIIESLSGAIFVDSG 754
+ +D RL L S ++ W+S + K DI+ES+ GAI+VDSG
Sbjct: 1217 LQTSRDAALDRHRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSG 1275
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQR EFLGD++L Y+++ L+ + G LT+ R+ V N +++ GL I+
Sbjct: 946 YQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLDSFIIT 1005
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
+ +WI + + R+ K L D+IE+L GA ++D G +K
Sbjct: 1006 KALTPRRWIAPLIST--RVGAAPV----KRQMSAKVLADVIEALIGAAYLDGGHSK 1055
>gi|350630584|gb|EHA18956.1| hypothetical protein ASPNIDRAFT_42773 [Aspergillus niger ATCC 1015]
Length = 1498
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 197/454 (43%), Gaps = 74/454 (16%)
Query: 384 CRIIMGPMSLS-----TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C I + P+ +S T +S P+I+ R+ + L+++ L N T+ L
Sbjct: 955 CFICIEPLKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLAL 1008
Query: 439 EAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 1009 EAFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSISLFTQNPDDDEFDYH 1068
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + +I N L D ++ +IR+ F W G + DHS RK
Sbjct: 1069 VNRMCLICNKNLFNAAVDKEIYKYIRSRGFSRHTWYPEG--LKLLQGKDHS----RKATT 1122
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL---------------DRIGIKVDFV 589
+ + KT+ADV EALIGA L +GG + +R + F
Sbjct: 1123 ESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFY 1182
Query: 590 NVP-YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
+P Y+R+ AE ++ R LE L+Y FR P+LL A TH SY ++P CYQRLE
Sbjct: 1183 TIPKYQRRAADGAELYLS-RKLEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQRLE 1240
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
FLGD+++D + L+ ++P P LT+ + A V+N +VK GLH H+ + S L
Sbjct: 1241 FLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPL 1300
Query: 707 YKWINITVDSFERLSLESTFG---WESETSFPKA----------------LGDIIESLSG 747
I + + ES W PK L D++E+ G
Sbjct: 1301 QSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKVMTPSALRNTANVDGQCLPDMVEAYVG 1360
Query: 748 AIFVDSGCNKEVV----FESIRPLLEPMITPETM 777
A+FVDS N EV+ + I+P E M +T
Sbjct: 1361 AVFVDSDFNFEVIERFFRDYIKPFFEDMAIYDTF 1394
>gi|326472405|gb|EGD96414.1| dicer [Trichophyton tonsurans CBS 112818]
Length = 1519
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 201/445 (45%), Gaps = 67/445 (15%)
Query: 367 EKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC 426
E Q+ P + + + E +I + L+T F F P+I+ R++S L+A L+ C
Sbjct: 982 ENQKSPP-VDYYVCAEALKISAISVPLAT-QIFVF-PAIIWRMESYLIA-------LEAC 1031
Query: 427 MQ-NVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQL 471
+ + IP LEA+T ++ +E G + E LE LGD FLK A S L
Sbjct: 1032 EKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYERLEFLGDCFLKMATSISL 1091
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------D 524
F ++ E VK+ +I N L ++ FIR+ F + W G D
Sbjct: 1092 FAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRSFSRRAWYPEGLTLLKGKD 1151
Query: 525 NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN--------VGL 576
+H+L + KT+ADV EALIGA L GG +
Sbjct: 1152 KKEGPNGPEHALAD--------------KTIADVCEALIGASLLAGGPDHKFDMATKAVT 1197
Query: 577 IFLD----RIGIKVDF---VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALT 629
+F++ R+ D+ ++P + A + ++S L Y F+ P LL A
Sbjct: 1198 VFVNSDDHRVEKWADYSRLYSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFM 1257
Query: 630 HGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
H SY +P CYQRLEFLGD++LD + +L+ +YP P LT+ + A V+N
Sbjct: 1258 HPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLG 1316
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFE--RLSLESTF-GWESETSFPKALGDIIES 744
+V LH H++H S L I + + ++ +E W PK L DI+E+
Sbjct: 1317 SLAVNLNLHVHLIHISNTLQGQITSYTEELQAMKIKMEGNLEAWTYTNEPPKCLPDIVEA 1376
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLE 769
GAIFVDS N +VV E R ++
Sbjct: 1377 YLGAIFVDSNFNFDVVDEFFRKFIQ 1401
>gi|146324173|ref|XP_753471.2| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|129558032|gb|EAL91433.2| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1546
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 227/528 (42%), Gaps = 88/528 (16%)
Query: 371 EPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 430
EP +IS LPP + +ST +F P+I+ RL S L+A+ + L +
Sbjct: 1034 EPLRIS-ALPPSI---------VSTCLAF---PAIISRLDSYLIALEACDEL------EL 1074
Query: 431 TIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQ 476
I LEA T + +E G + E LE LGD FLK A S LF
Sbjct: 1075 VIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNP 1134
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
N E V + +I N L ++ +IR+ F +W D DHS
Sbjct: 1135 NDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWY--PDGLTLLHGKDHST 1192
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG--------ENVGLIFLD----RIGI 584
K+ G+ + KT+ADV EALIGA L +GG +D R+
Sbjct: 1193 ----KLLSEGKHALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSC 1248
Query: 585 KVDFVNVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YML 635
+++ + ++Q + R RH+E L Y F P LL A+TH S Y +
Sbjct: 1249 WKEYITLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRV 1308
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
P CYQRLEFLGD++LD + L+ ++P P L++ + A V+N SVK G
Sbjct: 1309 P----CYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGF 1364
Query: 696 HKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGC 755
H+ I+ S L I V+ E ES L D++E+ GAIFVDS
Sbjct: 1365 HRRIMAFSNPLQAQITHYVEEIETAQAESQGA---------CLPDMVEAYLGAIFVDSKF 1415
Query: 756 NKEVV---FE-SIRPLLEPMITPETM-RLQPAREL-----NEY-CQKHHFSMKKTVAPRI 804
+ +V+ FE I+P E M +T P L NEY C ++ +K P I
Sbjct: 1416 DFQVIEAFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCT--NYCLKAGELPTI 1473
Query: 805 NGK-AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
+G A V V +G + + + + AK AS++ L L P
Sbjct: 1474 DGAPATVLAAVIVHGNVISEARSSSSR-YAKITASEKALAVLDGLLPS 1520
>gi|326481629|gb|EGE05639.1| hypothetical protein TEQG_04648 [Trichophyton equinum CBS 127.97]
Length = 1519
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 201/445 (45%), Gaps = 67/445 (15%)
Query: 367 EKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC 426
E Q+ P + + + E +I + L+T F F P+I+ R++S L+A L+ C
Sbjct: 982 ENQKSPP-VDYYVCAEALKISAISVPLAT-QIFVF-PAIIWRMESYLIA-------LEAC 1031
Query: 427 MQ-NVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQL 471
+ + IP LEA+T ++ +E G + E LE LGD FLK A S L
Sbjct: 1032 EKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYERLEFLGDCFLKMATSISL 1091
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------D 524
F ++ E VK+ +I N L ++ FIR+ F + W G D
Sbjct: 1092 FAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRSFSRRAWYPEGLTLLKGKD 1151
Query: 525 NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN--------VGL 576
+H+L + KT+ADV EALIGA L GG +
Sbjct: 1152 KKEGPNGPEHALAD--------------KTIADVCEALIGASLLAGGPDHKFDMATKAVT 1197
Query: 577 IFLD----RIGIKVDF---VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALT 629
+F++ R+ D+ ++P + A + ++S L Y F+ P LL A
Sbjct: 1198 VFVNSDDHRVEKWADYSRLYSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFM 1257
Query: 630 HGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
H SY +P CYQRLEFLGD++LD + +L+ +YP P LT+ + A V+N
Sbjct: 1258 HPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLG 1316
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFE--RLSLESTF-GWESETSFPKALGDIIES 744
+V LH H++H S L I + + ++ +E W PK L DI+E+
Sbjct: 1317 SLAVNLNLHVHLIHISNTLQGQITSYTEELQAMKIKMEGNLEAWTYTNEPPKCLPDIVEA 1376
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLE 769
GAIFVDS N +VV E R ++
Sbjct: 1377 YLGAIFVDSNFNFDVVDEFFRKFIQ 1401
>gi|57236094|gb|AAW48724.1| dicer-1 [Aedes aegypti]
Length = 2192
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 172/349 (49%), Gaps = 57/349 (16%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-NVPYE----------RQFQ 598
+ K+VAD VEALIGA+L G L+ + +GI+V V VPY+ ++++
Sbjct: 1840 IPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKVPGSSQRYE 1899
Query: 599 VQAERLVNV-------------------RHLESLLN-YS-FRDP-------SLLVEALTH 630
+ +V + LE LL+ YS F D S L++A+TH
Sbjct: 1900 KDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFEDSLGYHHSRSYLLQAMTH 1959
Query: 631 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSS 690
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 691 VKHGLHKHILHASQELY----KWINITVDSFERLSLESTFGWESE------TSFPKALGD 740
V+H HK+ H S L +++ I D+ +S E E E PKALGD
Sbjct: 2020 VRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLISEDECDEAEDVEVPKALGD 2079
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMK 797
+ ES++GAIF+DS + + V++ R ++ P I ++ P REL E + F
Sbjct: 2080 VFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPKSPIRELLELEPETAKFGKP 2139
Query: 798 KTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ +A + VTVEV GT + AK A+K L+ LK
Sbjct: 2140 EKLAD--GRRVRVTVEVFGKGTF---RGIGRNYRIAKCTAAKCALRQLK 2183
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + +SN
Sbjct: 1655 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVSNL 1714
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1715 NLYRLGRRKVLGESMIATKFEPHDNWLPP 1743
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+L N+ PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1645 NLNNHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEG 1701
Query: 672 DLTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1702 KLSHLRSKQVSN 1713
>gi|16215719|dbj|BAB69959.1| double-strand-specific ribonuclease [Drosophila melanogaster]
Length = 1722
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 137/530 (25%), Positives = 214/530 (40%), Gaps = 123/530 (23%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1192 GEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNR 1251
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIPG------------DNS------GSYELNDHS 535
L D +P + T F P+ W+ PG +N G + L D +
Sbjct: 1252 NLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWQENPEFAKIIGPHNLRDLA 1311
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1312 LGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTILNKVIADTLE 1371
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P + ++ L+
Sbjct: 1372 ALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLI 1431
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1432 NHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1491
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------VD 715
++PG LTD+RSA VNN A V+H LH IL + +L K++N V
Sbjct: 1492 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVT 1551
Query: 716 SFERLSLEST--------------------------------------FGWESETSFPKA 737
++ R+ LE F + PKA
Sbjct: 1552 NYVRILLEEADVQPTPPDLDDELDMTELPHANKCISQEAEKGVPPKGEFSMSTNVDVPKA 1611
Query: 738 LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMK 797
LGD++E+L A+++D + + +E I L EP + E R P + + + H K
Sbjct: 1612 LGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQ-EFTRKVPINHIRQLVEHKH--AK 1667
Query: 798 KTVAPRI--NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
I G V+ + K ++K+ AK A+K L+ L
Sbjct: 1668 PVFGSPIVEGGTVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1717
>gi|296812107|ref|XP_002846391.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
gi|238841647|gb|EEQ31309.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
Length = 1437
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 198/427 (46%), Gaps = 65/427 (15%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P I M P+ S F F+PS++H + LLA L +L +++ + VL
Sbjct: 934 PVRDSSISMLPVGFSKFA--LFIPSLIHTVGRFLLAEELSKTILSPIGFKDIQL----VL 987
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
AI+ +E + + LE LGDS LK S QL + HEGLLS KK IISN+ L K
Sbjct: 988 TAISASSARESTNYQRLEFLGDSALKLHTSMQLLVDHPFWHEGLLSHKKGFIISNSRLWK 1047
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
+ L FI T F W P NS +Y N ++ +++ +KT+ADV
Sbjct: 1048 ATIETGLDRFILTACFTGAKWR-PLYNS-TYTAN------AGRVGKNSTREISTKTLADV 1099
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ----FQVQAERLVNVRH----- 609
VEALIGA + GGE+ L L ++++++ YE++ + E N H
Sbjct: 1100 VEALIGAAIVDGGEDKALHCLQVFLPEINWLS--YEKRIEMLYDASPEFHDNAPHDILSK 1157
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E L++YSF +LL +L+H S P YQRLEFLGD++LD ++T L+ +
Sbjct: 1158 IEPLIDYSFTKKALLATSLSHPSN--PISGMTYQRLEFLGDSILDSIVTRALFRSNKEIP 1215
Query: 670 PGDLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHILH-A 702
D+ MR+A VN D A S+ + L +++ H A
Sbjct: 1216 HQDMHLMRTALVNADYLAFLCMNTSTDEQREDVSASSIGKVEITSSTRRVSLWQYMSHSA 1275
Query: 703 SQELYKWINITVDSFERLSLESTFGWESETSFP----------KALGDIIESLSGAIFVD 752
+ ++ TV FE L + S T +P K DIIES+ GAIF+D
Sbjct: 1276 ALDIANAQLATVRKFEELREKIDEALRSGTRYPWTLLLTLNAPKFFSDIIESILGAIFID 1335
Query: 753 SGCNKEV 759
S + E
Sbjct: 1336 SRGSVEA 1342
>gi|312069719|ref|XP_003137813.1| hypothetical protein LOAG_02227 [Loa loa]
gi|307767024|gb|EFO26258.1| hypothetical protein LOAG_02227 [Loa loa]
Length = 1928
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 166/336 (49%), Gaps = 40/336 (11%)
Query: 547 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF----VNVPYERQFQVQAE 602
++ + K++AD VE+LIGA L G L F+ +G+KV V P R +
Sbjct: 1586 QQSLGDKSIADAVESLIGAHLLELGPTATLRFMKWLGLKVLTEPVQVEPPLLRFIDTTEQ 1645
Query: 603 RLVNVR------------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
++R LE + Y F D + L++A TH SY I CYQRLEFLGD
Sbjct: 1646 PDKSLRKLNDLWVQFQFSKLEDFIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGD 1705
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVLDY+IT +L+ SPG LTD+RSA VNN +A ++KH HKH + L+ I
Sbjct: 1706 AVLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAIKHNFHKHFIAMCPRLHHMI 1765
Query: 711 ----------NITVDSF-ERLSLEST-----FGWESETSFPKALGDIIESLSGAIFVDSG 754
N++ +F E + + +T G E + PKA+GDI ES++GAI++DSG
Sbjct: 1766 EKFVCLCTEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSG 1825
Query: 755 CNKEVVFESIRPLLEPMITP--ETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVT 811
+ ++V+ L++ I P REL E ++ FS + + GK VT
Sbjct: 1826 RSLDIVWRVFYNLMKETIDECCSNPPRSPIRELLEMEPERARFSKLERILE--TGKVRVT 1883
Query: 812 VEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
V++ + T AK A+K L+ L++
Sbjct: 1884 VDIQGKC---RFTGMGRSYRIAKCTAAKRALRYLRS 1916
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + LF T HEG LS + + +SN L
Sbjct: 1412 LLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEVSNCNL 1471
Query: 497 CKLGCDHKLPGFIRTEPFDPK-MWMIP 522
+LG H LP I FDP W+ P
Sbjct: 1472 YRLGRKHNLPSLIIGSKFDPNDGWLPP 1498
>gi|115468004|ref|NP_001057601.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|75254269|sp|Q69KJ0.1|RTL3_ORYSJ RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3
gi|51091751|dbj|BAD36550.1| CAF protein-like [Oryza sativa Japonica Group]
gi|113595641|dbj|BAF19515.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|125597181|gb|EAZ36961.1| hypothetical protein OsJ_21299 [Oryza sativa Japonica Group]
Length = 299
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 133/245 (54%), Gaps = 8/245 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLITVYLYNK 664
V +ESLL Y FRD +L+ EALTHGS+ P P Y+RLE+LGDAVL +++ ++
Sbjct: 38 EVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLT 97
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
Y L PG LT +R+A+V+ + A +V HGLH + H + L I D E LS+
Sbjct: 98 YGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQIT---DFIEELSMYP 154
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
PK L D++ESL GAI+ DS N+E+V++ + L +P+I+ ET+ P E
Sbjct: 155 IHS-NGLLDPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSE 213
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L E+CQK +K + +TVEV +G + KE A+ A+K L
Sbjct: 214 LFEFCQKTRRGVKIV---KDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDK 270
Query: 845 LKASF 849
LK +
Sbjct: 271 LKETL 275
>gi|147770295|emb|CAN62473.1| hypothetical protein VITISV_005321 [Vitis vinifera]
Length = 287
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 6/197 (3%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
AE ++ +E +L YSF + LL EA TH S + Y+RLEF+GD+VL LIT
Sbjct: 24 AESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQF--SYERLEFMGDSVLSLLITKE 81
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
+ YP L PG LT +RSA+V+ + A ++KHGLH+ + H ++ + I ++ +
Sbjct: 82 QFFLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEY 141
Query: 721 SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ 780
L S + PK L D++ES GA+FVD C+ + V + + LLEPMI PET+++
Sbjct: 142 PLHSN----GQIEVPKVLADVVESTIGAVFVDCNCSVDTVXKVFKGLLEPMIVPETLKVH 197
Query: 781 PARELNEYCQKHHFSMK 797
P ELNE CQK ++
Sbjct: 198 PVTELNERCQKRGLKLE 214
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 439 EAITTKKCQEG-FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
EA T CQ+ F E LE +GDS L +++ F Y + G L+ + + L
Sbjct: 49 EAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQFFLYPDLQPGRLTRLRSANVDKEKLA 108
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
++ H L F+R + P YE + E ++ G+ +V K +AD
Sbjct: 109 RVALKHGLHRFLRHKK--------PKIEQQIYEFAE--AIKEYPLHSNGQIEV-PKVLAD 157
Query: 558 VVEALIGA 565
VVE+ IGA
Sbjct: 158 VVESTIGA 165
>gi|195335297|ref|XP_002034311.1| GM19969 [Drosophila sechellia]
gi|194126281|gb|EDW48324.1| GM19969 [Drosophila sechellia]
Length = 1731
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 194/475 (40%), Gaps = 127/475 (26%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1204 GEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNR 1263
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK----------------MW------------------- 519
L D +P + T F P+ +W
Sbjct: 1264 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLA 1323
Query: 520 ------MIPGD---------------NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
++ G+ N+GS+ D S F+ Y G+ + +K +AD
Sbjct: 1324 LDDEESLVKGNCSDIKYNCFVAGCRANAGSFY--DGSDFSSEVNYCVGQVTIANKVIADT 1381
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER--------------- 603
+EAL+G + G L+ I ++ P ++
Sbjct: 1382 LEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGF 1441
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
L+N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1442 LINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFE 1501
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINIT------ 713
++PG LTD+RSA VNN A V+H LH IL +++L K++N
Sbjct: 1502 NNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHR 1561
Query: 714 VDSFERLSLEST-----------------------------------FGWESETSFPKAL 738
V ++ + LE F + PK L
Sbjct: 1562 VTNYVHILLEEADVLPTPLDLDDELELPHANECISQEAEQGVPPKGEFNMSTNVDVPKTL 1621
Query: 739 GDIIESLSGAIFVDSGCNK-----EVVFESIRPLLEPMITPETMRLQPARELNEY 788
GD++E+L AI++D C +V+F P L+ + + P R+L E+
Sbjct: 1622 GDVLEALIAAIYLD--CRDLRRTWDVIFRLFEPELQEFT--RNVPINPIRQLIEH 1672
>gi|167046026|gb|ABZ10544.1| dicer-like protein C [Placozoa sp. DMJ-2008]
Length = 352
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 169/340 (49%), Gaps = 30/340 (8%)
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
+ ++ +LE LE LGDSFLK+ + LF ++ +HEG L+ + +I+ N L KLG
Sbjct: 3 EAEDDINLEGLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNLLKLGKSTP 62
Query: 505 LPGFIRTEPFD---PKMWMIPGD---NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
+ +I +PF+ + W+ PG +S L++ + +K SK++ADV
Sbjct: 63 ICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLDEKVTSDLDGDKAVTHQKFSSKSIADV 122
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKVDF-VN------VPYERQFQVQAERLV----NV 607
++A++ A L E F+ + + F +N +P + + N+
Sbjct: 123 MKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDDISSNEINEIYEANNL 182
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNKYP 666
LE ++ YSF++ ++ ALTH SY I Q+LEFLGD +L Y+I + +N +P
Sbjct: 183 ERLEKVIGYSFQNKLFMIRALTHSSYHHHNIAIESNQKLEFLGDTILQYIIARHFFNSHP 242
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN-----ITVDSFERLS 721
P L D + A VNN C A + G+ K+I S +L++ IN IT D
Sbjct: 243 DAKPAKLHDFQEAIVNNKCLADIGIAIGVSKYIFQESPDLFRDINQFVKIITCDYMIDDE 302
Query: 722 L------ESTF-GWESETSFPKALGDIIESLSGAIFVDSG 754
+ E+ F + E PK + D++E+L GAI++D+G
Sbjct: 303 MNYNDRTEALFENFTEEVKIPKPMSDVVEALIGAIYIDTG 342
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
+ LE LGD+ L+Y ++ F ++ + L ++ I++N L +G + +I E
Sbjct: 219 QKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLADIGIAIGVSKYIFQE 278
Query: 513 PFDPKMW--------MIPGDNSGSYELNDHSLFNER--KIYVTGRKKVK-SKTVADVVEA 561
P ++ +I D Y ++D +N+R ++ ++VK K ++DVVEA
Sbjct: 279 S--PDLFRDINQFVKIITCD----YMIDDEMNYNDRTEALFENFTEEVKIPKPMSDVVEA 332
Query: 562 LIGAFLSTGGENVG 575
LIGA GE++
Sbjct: 333 LIGAIYIDTGESIA 346
>gi|159126799|gb|EDP51915.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1546
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 227/528 (42%), Gaps = 88/528 (16%)
Query: 371 EPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 430
EP +IS LPP + +ST +F P+I+ RL S L+A+ + L +
Sbjct: 1034 EPLRIS-ALPPSI---------VSTCLAF---PAIISRLDSYLIALEACDEL------EL 1074
Query: 431 TIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQ 476
I LEA T + +E G + E LE LGD FLK A S LF
Sbjct: 1075 VIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNP 1134
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
N E V + +I N L ++ +IR+ F +W D DHS
Sbjct: 1135 NDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWY--PDGLTLLHGKDHST 1192
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG--------ENVGLIFLD----RIGI 584
K+ G+ + KT+ADV EALIGA L +GG +D R+
Sbjct: 1193 ----KLLSEGKHALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSC 1248
Query: 585 KVDFVNVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YML 635
+++ + ++Q + R RH+E L Y F P LL A+TH S Y +
Sbjct: 1249 WKEYITLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRV 1308
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
P CYQRLEFLGD++LD + L+ ++P P L++ + A V+N SVK G
Sbjct: 1309 P----CYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGF 1364
Query: 696 HKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGC 755
H+ I+ S L I V+ E ES L D++E+ GAIFVDS
Sbjct: 1365 HRRIMAFSNPLQAQITHYVEEIETAQAESQGA---------CLPDMVEAYLGAIFVDSKF 1415
Query: 756 NKEVV---FE-SIRPLLEPMITPETM-RLQPAREL-----NEY-CQKHHFSMKKTVAPRI 804
+ +V+ FE I+P E M +T P L NEY C ++ +K P I
Sbjct: 1416 DFQVIEAFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCT--NYCLKAGELPTI 1473
Query: 805 NGK-AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
+G A V V +G + + + + AK AS++ L L P
Sbjct: 1474 DGAPATVLAAVIVHGNVISEARSSSSR-YAKIKASEKALAVLDGLLPS 1520
>gi|194880776|ref|XP_001974538.1| GG21041 [Drosophila erecta]
gi|190657725|gb|EDV54938.1| GG21041 [Drosophila erecta]
Length = 1729
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 191/475 (40%), Gaps = 125/475 (26%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K ++SN
Sbjct: 1200 GEFLAAITSSGTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGSLTQVKSMLVSNR 1259
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK-MWMIP------------------GDNSGSYELNDHS 535
L D +P I T F P+ W+ P + G + L D +
Sbjct: 1260 NLLYCLRDTDIPKKISTVLFTPRYTWLPPSISLPHNVLTLWRENPELANMIGPHNLRDLA 1319
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L E + + G + K +AD +E
Sbjct: 1320 LGEEESMVKGYCNDINYKSFVEGCRANAQSHHAGADFSAEVNFCVGLVSIPDKVIADTLE 1379
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I + P + ++ L+
Sbjct: 1380 ALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNSTEIDGFLI 1439
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE+ L Y+F+D L++ALTH SY I CYQ LEF+GDA+LD+LI+VY++
Sbjct: 1440 NHYHLENNLGYTFKDRGYLLQALTHPSYPTNRITGCYQELEFIGDAILDFLISVYIFENN 1499
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE------- 718
++PG LTD+RSA VNN A V+H LH IL + L + I+ V E
Sbjct: 1500 TNMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAMLAESISKFVHFQESQRHRVT 1559
Query: 719 ---RLSLEST-------------------------------------FGWESETSFPKAL 738
R+ LE F + PKAL
Sbjct: 1560 NHVRILLEEADVQPTSLDLDDYLDMTELNNALKSISQEEQNDQPRGEFNMSTNVDVPKAL 1619
Query: 739 GDIIESLSGAIFVDSGCNK-----EVVFESIRPLLEPMITPETMRLQPARELNEY 788
GD++E+L AI++D C EV+F +P L+ + + P R+L E+
Sbjct: 1620 GDVLEALIAAIYLD--CRDLQRTWEVIFNLFKPELQEF--ARNVPINPIRQLMEH 1670
>gi|347968645|ref|XP_003436256.1| AGAP002836-PB [Anopheles gambiae str. PEST]
gi|333467908|gb|EGK96757.1| AGAP002836-PB [Anopheles gambiae str. PEST]
Length = 2336
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 137/280 (48%), Gaps = 41/280 (14%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A L E L Y FRD S L++A+TH SY + CYQRLEFLGDA+LDYLIT +
Sbjct: 2053 ARLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRH 2112
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY----KWINITVDS 716
LY SPG LTD+RSA VNN +A +V+HG HK+ LH S L +++ I ++
Sbjct: 2113 LYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQEN 2172
Query: 717 FERLSLESTF-------------------------GWESETSFPKALGDIIESLSGAIFV 751
R++ E + G + PKALGD+ ES++GAIF+
Sbjct: 2173 GHRITEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFL 2232
Query: 752 DSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY---CQKHHFSMKKTVAPRING 806
DS + + V++ R ++ P I ++ P REL E K K T R+
Sbjct: 2233 DSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLTDGRRVR- 2291
Query: 807 KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
VTVEV GT + AK A+K L+ LK
Sbjct: 2292 ---VTVEVFGKGTF---RGIGRNYRIAKCTAAKCALRQLK 2325
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + L+ Y N HEG LS + + +SN L
Sbjct: 1747 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSNLNL 1806
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIP 522
+LG +L + F+P W+ P
Sbjct: 1807 YRLGRRKRLGDCMIAAKFEPHDNWLPP 1833
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 1763 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1803
>gi|125555283|gb|EAZ00889.1| hypothetical protein OsI_22916 [Oryza sativa Indica Group]
Length = 276
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 133/245 (54%), Gaps = 8/245 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLITVYLYNK 664
V +ESLL Y FRD +L+ +ALTHGS+ P P Y+RLE+LGDAVL +++ ++
Sbjct: 38 EVAAVESLLGYEFRDKALVEQALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLT 97
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
Y L PG LT +R+A+V+ + A +V HGLH + H + L I D E LS+
Sbjct: 98 YGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQIT---DFIEELSMYP 154
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
PK L D++ESL GAI+ DS N+E+V++ + L +P+I+ ET+ P E
Sbjct: 155 IHS-NGLLDPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSE 213
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L E+CQK +K + +TVEV +G + KE A+ A+K L
Sbjct: 214 LFEFCQKTRRGVKIV---KDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDK 270
Query: 845 LKASF 849
LK +
Sbjct: 271 LKETL 275
>gi|58382645|ref|XP_312076.2| AGAP002836-PA [Anopheles gambiae str. PEST]
gi|55241936|gb|EAA07793.2| AGAP002836-PA [Anopheles gambiae str. PEST]
Length = 2256
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 137/280 (48%), Gaps = 41/280 (14%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A L E L Y FRD S L++A+TH SY + CYQRLEFLGDA+LDYLIT +
Sbjct: 1973 ARLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRH 2032
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY----KWINITVDS 716
LY SPG LTD+RSA VNN +A +V+HG HK+ LH S L +++ I ++
Sbjct: 2033 LYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQEN 2092
Query: 717 FERLSLESTF-------------------------GWESETSFPKALGDIIESLSGAIFV 751
R++ E + G + PKALGD+ ES++GAIF+
Sbjct: 2093 GHRITEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFL 2152
Query: 752 DSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY---CQKHHFSMKKTVAPRING 806
DS + + V++ R ++ P I ++ P REL E K K T R+
Sbjct: 2153 DSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLTDGRRVR- 2211
Query: 807 KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
VTVEV GT + AK A+K L+ LK
Sbjct: 2212 ---VTVEVFGKGTF---RGIGRNYRIAKCTAAKCALRQLK 2245
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + L+ Y N HEG LS + + +SN L
Sbjct: 1667 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSNLNL 1726
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIP 522
+LG +L + F+P W+ P
Sbjct: 1727 YRLGRRKRLGDCMIAAKFEPHDNWLPP 1753
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 1683 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1723
>gi|29424049|gb|AAO73809.1| dicer-1 [Anopheles gambiae]
Length = 2259
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 137/280 (48%), Gaps = 41/280 (14%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A L E L Y FRD S L++A+TH SY + CYQRLEFLGDA+LDYLIT +
Sbjct: 1976 ARLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRH 2035
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY----KWINITVDS 716
LY SPG LTD+RSA VNN +A +V+HG HK+ LH S L +++ I ++
Sbjct: 2036 LYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQEN 2095
Query: 717 FERLSLESTF-------------------------GWESETSFPKALGDIIESLSGAIFV 751
R++ E + G + PKALGD+ ES++GAIF+
Sbjct: 2096 GHRITEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFL 2155
Query: 752 DSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY---CQKHHFSMKKTVAPRING 806
DS + + V++ R ++ P I ++ P REL E K K T R+
Sbjct: 2156 DSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLTDGRRVR- 2214
Query: 807 KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
VTVEV GT + AK A+K L+ LK
Sbjct: 2215 ---VTVEVFGKGTF---RGIGRNYRIAKCTAAKCALRQLK 2248
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + L+ Y N HEG LS + + +SN L
Sbjct: 1667 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSNLNL 1726
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIP 522
+LG +L + F+P W+ P
Sbjct: 1727 YRLGRRKRLGDCMIAAKFEPHDNWLPP 1753
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 1683 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1723
>gi|332020119|gb|EGI60563.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1979
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 165/363 (45%), Gaps = 74/363 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG--------IKVDFVNVPYER------ 595
+ K++AD VEALIGA+L G L+F+ +G I V N P ER
Sbjct: 1616 IPDKSIADCVEALIGAYLIACGPRGALLFMTWLGIHVLPTEEICVISENEPKERIPGSTP 1675
Query: 596 -----------------------------QFQVQAER-----LVNVRHLESLLNYSFRDP 621
++ E L LE + Y FRD
Sbjct: 1676 YIKGVNEYRETTWTQICYGKLEEPQNPLLRYIPDPESELYMMLDGYEELEKSIGYKFRDS 1735
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1736 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALV 1795
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE---------- 731
NN +A +V+ G HK+ H S L ++ ++ F R+ E+ E
Sbjct: 1796 NNTIFASLAVRCGFHKYFRHLSPGL----SVVINRFVRIQEENGHSISEEYYLIGEEECE 1851
Query: 732 ----TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAREL 785
PKALGD+ ESL+GAI++DSG + + V+ +++ I + + P REL
Sbjct: 1852 EAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIREL 1911
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V G+ FK + AK A+K LK
Sbjct: 1912 LELEPETAKFGRPEKLAD--GRRVRVTVDVFGKGS-FKGIGRNY--RIAKCTAAKCALKK 1966
Query: 845 LKA 847
LK+
Sbjct: 1967 LKS 1969
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1444 SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1503
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1504 NLYRLGRQKMLGESMIATKFEPHDNWLPP 1532
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 173/448 (38%), Gaps = 105/448 (23%)
Query: 45 MGICTLYLPNNCPIQTVIAQ---GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEH 101
M IC L LP N P++ VI N ++ A L+ C LH+ + DNLLP + E
Sbjct: 664 MYICFLRLPINSPLKYVITSYPMPNRAMARRMAALQMCIDLHRENEIDDNLLP-IGKENF 722
Query: 102 DAQKHGNEPYDAEHPIYFPPE----LVNQCPQDTK------------------------I 133
A+ P DAE P P E P TK
Sbjct: 723 KAK-----PEDAEVPA-LPDESRADFSEARPGTTKRRQYYYKKTAEALTDCRPIVGVPSY 776
Query: 134 TYH------CYLIELKQNFNYDI-PAHDIVLAVRTELESEIKKV-NFDLEVDRGRLTVNL 185
YH C L E + I P + + EI K+ F + G + V L
Sbjct: 777 LYHINMVLSCPLPEEQNTRGRRIYPPEESAIGFGILTLKEIPKLCPFPIYTRSGEVHVQL 836
Query: 186 KHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRD--NLEIDYLLLP-- 241
K L K K ++ FQI +++ + + K L L D E Y+++P
Sbjct: 837 K-LSK------KTVILDEFQIERVDTFLNYTFTNVLRLQKYLMLFDPNASENSYIIVPVK 889
Query: 242 ------ASEQSIDWEPVASL-----SFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMI 290
S+ S+DW + + + P I + KN K P
Sbjct: 890 IFATCEGSDISVDWNFLECIYQNRNAVPTKIPEEDRKNF-----------KFDP---SKY 935
Query: 291 YNSVVCTPHSGQ----IYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQL-CFDQ 345
Y++V+ + Q +Y+ + +LN S F +D T++++Y ++YGIQ+ +Q
Sbjct: 936 YDAVIMPWYRSQDQPQYFYVAEICTNLNPKSSFPGHDYS--TFEEYYYKKYGIQIQNLEQ 993
Query: 346 ELL----LNGRRIFHAQNYLSK------CRQEKQREPSKISFE----LPPELCRIIMGPM 391
LL + R F Y+++ E+ + + + E L ELC I P
Sbjct: 994 SLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELCAIHPFPA 1053
Query: 392 SLSTFYSFTFVPSIMHRLQSLLLAVNLK 419
SL + +P I++R+ +LLLA ++
Sbjct: 1054 SL--WRQAVCLPCILYRINALLLANQIR 1079
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L +S PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1435 LKGHSGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1491
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1492 LSHLRSKQVSN 1502
>gi|327297344|ref|XP_003233366.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
gi|326464672|gb|EGD90125.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
Length = 1519
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 187/413 (45%), Gaps = 65/413 (15%)
Query: 399 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKVLEAIT--TKKCQE------- 448
F F P+++ R++S L+A L+ C + IP LEA+T ++ +E
Sbjct: 1012 FVF-PAMIWRMESYLIA-------LEACENLQLKIPPELALEALTKDSENTEEHGMEQIR 1063
Query: 449 -----GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDH 503
G + E LE LGD FLK A S LF ++ E VK+ +I N L +
Sbjct: 1064 FQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAINL 1123
Query: 504 KLPGFIRTEPFDPKMWMIPG-------DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
++ FIR+ F + W G D +H+L + KT+A
Sbjct: 1124 EIFKFIRSRSFSRRAWYPEGLTLLKGKDKKEGPNGPEHALAD--------------KTIA 1169
Query: 557 DVVEALIGAFLSTGGEN--------VGLIFLD----RIGIKVDF---VNVPYERQFQVQA 601
DV EALIGA L GG + +F++ R+ D+ ++P + A
Sbjct: 1170 DVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYSRLYSLPNYQTASASA 1229
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITV 659
+ ++S L Y F+ P LL A H SY +P CYQRLEFLGD++LD +
Sbjct: 1230 SEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVN 1288
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE- 718
+L+ +YP P LT+ + A V+N +V LH H++H S L I + +
Sbjct: 1289 HLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQA 1348
Query: 719 -RLSLESTF-GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
++ +E W PK L DI+E+ GAIFVDS N +VV + R ++
Sbjct: 1349 MKIKMEGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVVDDFFRKFIQ 1401
>gi|396465578|ref|XP_003837397.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
gi|312213955|emb|CBX93957.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
Length = 1588
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 204/858 (23%), Positives = 351/858 (40%), Gaps = 148/858 (17%)
Query: 10 SFIQSRGRARMQNSDYLLMLKRYFKPTPKFDINKEMG---ICTLYLPNNCPIQTVIAQGN 66
+ I S R M Y++ +P +D + IC + LP PI ++ +
Sbjct: 657 AVIPSPNRETMVQPTYII------RPATNYDPRNPLRSGFICEVILPEYAPIISITGKIE 710
Query: 67 IKTL--KQTACLEACKKLHQIGALTDNLLPDV---VVEEHDAQKHGNEPYDAEHPIYFPP 121
K L K +A C +L + G L +NLLP + +A +E +P+ P
Sbjct: 711 SKKLIAKCSAAFMMCLELRKRGYLDENLLPTLHRLAPARRNALLAVSEKKKGNYPMLIKP 770
Query: 122 ELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRL 181
Q +DT + YL + + D P + L R + + +F + + GR
Sbjct: 771 SFWKQG-RDT-VPDQLYLTVINVDAGLDRPHQPLGLLTRRQFP---QLPSFPIYLADGRP 825
Query: 182 T-VNLKHLGKIQLTPDKVL-LCRRFQIALFRVIM----DHNL------------DKLNEI 223
+ + K + + P ++L + +F + ++ I ++N+ D++++
Sbjct: 826 SHIVSKSIPTVLPVPSEILEMITKFTLRIYEDIYNKQYEYNIQKISYWVVPVLSDQIHKS 885
Query: 224 LKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSG 283
G + D L+++ + + DW P +P D+ K++ M+ R + S
Sbjct: 886 PSGTNIEDMLDMEQIRRVYKNPTWDWTPTV---YPEDLIDKYY--IDPMNGGR--RYYSN 938
Query: 284 PLCTCMIYNSVVCT--PHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQL 341
+ + + V P Q Y+ +L + ++ +R+ R+
Sbjct: 939 CIASHLTPQDPVPAHVPKQNQ-KYMNTILDYTDSRWARSRDTS-----------RWD--- 983
Query: 342 CFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLST-FYSFT 400
+ +L +I +N+L++ +++Q+E FEL +C + +++T F
Sbjct: 984 --PSQPVLEVEKIPFRRNHLARVEEKEQKE----LFELKNYVCPQPLKISNIATPFVVMC 1037
Query: 401 FV-PSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTK-------------- 444
+V P+I+HR +S L+A LD C + ++ + + LEA+T
Sbjct: 1038 YVLPAIIHRFESYLIA-------LDACEVLDLHVSPALALEALTKDSENTDEHEEEKINF 1090
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
K G + E LE LGD FLK A S +F +E V++ ++ N L + K
Sbjct: 1091 KSGMGPNYERLEFLGDCFLKMATSLSVFVQQPEENEFEYHVRRMLMLCNQNLMETAIGVK 1150
Query: 505 -------------LPGFIRTEPFDPKMW------MIPGDNSGSYELNDHSLFNERKIYVT 545
LP ++RTE F + W +I G E + ++
Sbjct: 1151 KVARPDGTEINLELPKYVRTEAFSRRTWYPEALKLIRGKGINKSEDD----------WLK 1200
Query: 546 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-------------- 591
R + K+VADV EA IGA ++ GL + + V V +
Sbjct: 1201 LRHNLGDKSVADVCEAFIGAAFMEHHKH-GLWIPSQWDLAVKAVKLFANNPDHSMEKWTD 1259
Query: 592 -------PYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCY 642
P + Q A L R +E++ Y F+ P L+ A TH SY M IP Y
Sbjct: 1260 YYAAYVKPKYQLDQPTAAMLDAARQIEAVHPYHFKYPRLVRSAFTHPSYAYMFEHIPN-Y 1318
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA 702
QRLEFLGD++LD ++LY KYP P LT+ ++ V+N VK G H+H+
Sbjct: 1319 QRLEFLGDSLLDMAFIMHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHRHLKSN 1378
Query: 703 SQELYKWIN---ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEV 759
+ L I + +D ER + + W + PK L D+IE+ A+FVDS + V
Sbjct: 1379 TAILSTQIRDYVLEIDEAEREANGAVDYWVNVHEPPKCLADVIEAYVAALFVDSQFDFSV 1438
Query: 760 VFESIRPLLEPMITPETM 777
V L+P T+
Sbjct: 1439 VQSFFDRHLKPFFADMTL 1456
>gi|409076508|gb|EKM76879.1| hypothetical protein AGABI1DRAFT_77978 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1528
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 152/567 (26%), Positives = 245/567 (43%), Gaps = 82/567 (14%)
Query: 355 FHAQ-NYL--SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQS 411
FH + N+L +K R P L PE I + S Y+F +PS++ L+
Sbjct: 932 FHPRCNFLIPTKPRDPGSSAPEIKYVYLMPEFTGITLIS-STEVEYAF-LLPSVLRSLEI 989
Query: 412 LLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQL 471
L +L++ L IP + + A+T E ++ + LETLGD+ LK+ + Q+
Sbjct: 990 NLTMASLRSNLFMPSPSLQDIPLALLSNAMTASSAGEKYNYQRLETLGDTVLKFLVALQV 1049
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW-------MIPGD 524
Y HEG L+ KKD ++N +L K +H+L +I E + W ++P
Sbjct: 1050 LVEYPLWHEGYLTKKKDHTVANVSLAKENINHRLYRWIIKEIMLGRKWRPRYSTKLLPPT 1109
Query: 525 NSGSYELNDHSLF-------------NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG 571
S E L RK + + + +K +ADVVE+LIGA GG
Sbjct: 1110 TPLSEEKIVEELLMVVDEGAELSSKGAARKKKNSKNQGLSTKILADVVESLIGAAYIHGG 1169
Query: 572 ENVGLIFLDRIGIKVDFVNVPYE-RQFQVQAERLVNV----RHLESLLNYSFRDPSLLVE 626
+G G+ + ++ P + F E N+ ++E +L Y+F+ LL+E
Sbjct: 1170 FPLGYECTKLFGLGLRWLPPPERIKDFLGAVEPDKNIPSALYYVEKMLGYTFKHKVLLLE 1229
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK-YPTLSPGDLTDMRSASVNNDC 685
ALTH SY Y+R+EFLGD+VLD ++T YLY+ SPG + RS+ VN
Sbjct: 1230 ALTHASYQQDARTVSYERMEFLGDSVLDMVVTDYLYHAPDKNYSPGHIHLRRSSVVNTHF 1289
Query: 686 YAL----SSVKHG---------------------LHKHILHASQELYKWINITVDSF--- 717
A +SVK L + +LH+S + T F
Sbjct: 1290 LAYICLKTSVKFDALMPRADDEGIELLADAQEVMLWQCLLHSSSRIMDDQANTHTRFKKR 1349
Query: 718 -----ERLSLESTFGWESETSF--PKALGDIIESLSGAIFVDS----GCNKEVVFE-SIR 765
E L ++ F W + T PK DIIES+ GA+++DS G ++V+ + I
Sbjct: 1350 REEIEEGLMNDTIFPWAALTRLQAPKFFSDIIESVLGAVYLDSNGDIGTARDVITKLGIL 1409
Query: 766 PLLEPMITPETMRLQPARELNEYCQKH------HFSMKKTVAPRINGKAAVTVEVHANGT 819
P LE ++ P ++++ KH F ++ V K +V V+
Sbjct: 1410 PTLERIVHDNVDVWHPVSRISQWASKHEKKLGWQFEKERGVV-----KCSVLVDGEVEAC 1464
Query: 820 LFKHTHADADKETAKKVASKEVLKSLK 846
+ ++ K +A++ +SL+
Sbjct: 1465 AMDDYRGASTQDEVKLIAAENASRSLR 1491
>gi|408399323|gb|EKJ78431.1| hypothetical protein FPSE_01388 [Fusarium pseudograminearum CS3096]
Length = 1860
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 198/441 (44%), Gaps = 75/441 (17%)
Query: 384 CRIIMGPMSLS------TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSK 436
C +I+ P+ +S F + TF P+I++R++S+L+A LD C ++TIP +
Sbjct: 1322 CFVILEPLRVSPIPIDVVFMTMTF-PAIINRIESILIA-------LDACASLDLTIPPAL 1373
Query: 437 VLEAITTK--------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
L+A+T + G + E LE LGDSFLK A + LF +E
Sbjct: 1374 ALQALTKDGGGTGDLDVKQSNFQPGMGDNYERLEFLGDSFLKMATTISLFTLIPESNECG 1433
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI 542
++ +I N L G +H L +IR++ FD + W D L +
Sbjct: 1434 YHAERVLLICNQNLFNHGVEHNLHQYIRSKSFDRRAWY-----------PDLPLKKGKVT 1482
Query: 543 YVTGRKKVKSKTVADVVEALIGAFLSTGGE---NVGLIFLDRI----GIKVDFVNVPYER 595
T + KT+ADV EALIGA +G E ++G+ + R+ +++F Y
Sbjct: 1483 KTTMTHDLADKTIADVCEALIGAAYLSGEEGNMDMGVKAVTRMVKSKNHEMEFFR-DYFA 1541
Query: 596 QFQVQ----------AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 645
F+V RLV+ + + Y F +LL H S+ +P YQRL
Sbjct: 1542 AFKVPPWHTAKSTTLQRRLVDC--VAKVTGYRFNSSALLQSVFKHPSWPYEAVPD-YQRL 1598
Query: 646 EFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE 705
EFLGDA+LD ++ +LY ++ P LT+ + A V+N V+ LHKH+L +
Sbjct: 1599 EFLGDALLDMVVVDFLYKRFKLADPQWLTEHKMAMVSNQFLGCLCVQLNLHKHLLFTTSS 1658
Query: 706 LYKWINITVDSFE-------------RLSLESTFGWESETSFPKALGDIIESLSGAIFVD 752
L I+ V E R F W + PK L D+ E+L GA+FVD
Sbjct: 1659 LTGQISEYVAELELAKEDAHKVAKANRTPTRMDF-WLHASLPPKVLADVAEALIGAMFVD 1717
Query: 753 SGCNKEVVFESIRPLLEPMIT 773
+ N VV + +EP T
Sbjct: 1718 AKYNYSVVNQFFTRFVEPYFT 1738
>gi|302687578|ref|XP_003033469.1| hypothetical protein SCHCODRAFT_37756 [Schizophyllum commune H4-8]
gi|300107163|gb|EFI98566.1| hypothetical protein SCHCODRAFT_37756, partial [Schizophyllum commune
H4-8]
Length = 1343
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 194/434 (44%), Gaps = 62/434 (14%)
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEA 440
P+ +I+ + + + +PS + L+ +LK L ++P S + A
Sbjct: 906 PQFASVILQGQQDAEYAAL--LPSTLRALEVTTTVDSLKEHLFASTPME-SVPQSLMSVA 962
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
+T QE + + LET+GD+ LKY S QL+ Y HEG L+ +KD +SN L K+
Sbjct: 963 MTAPVSQEPVNYQRLETMGDTVLKYLVSIQLYAEYPLWHEGYLAKQKDHTVSNVRLAKIS 1022
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
+ +I E PK +N S + + +E + K +ADV+E
Sbjct: 1023 VRRHIFQWIIREKNKPKKKKKKDNNQLSTKGTVLKITSELLL-------TKLSVLADVIE 1075
Query: 561 ALIGAFLSTGGENVGLI---FLDRIGIKVDFVNVPYERQFQVQAERLVNV-------RHL 610
+LIGA GG ++G F D +G+K D + + R V + +++
Sbjct: 1076 SLIGAAYVHGGLSLGRACAQFFD-LGLKWDTTSA----RISTILSRTVTLDQYPAELQYV 1130
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E +L Y+F +LL+EALTH SY P Y RLEFLGDAVLD +T Y++ SP
Sbjct: 1131 ERMLGYTFERKALLIEALTHASYQEPLPTPSYGRLEFLGDAVLDMAVTPYIFASKKNYSP 1190
Query: 671 GDLTDMRSASVNNDCYALS--SVKHGLHKHILHA------------SQELYKW------- 709
G + RSA+VN A K + KH+ SQ++Y W
Sbjct: 1191 GHIHLRRSAAVNMHFLAFVCLRAKVAVDKHMPRPTAPDWRVQMATESQDIYLWQCMLHSS 1250
Query: 710 ------INITVDSFERLSLE--------STFGWESETSF--PKALGDIIESLSGAIFVDS 753
N T F RL E F W + T PK D++ESL GA+F+D+
Sbjct: 1251 STVIDDQNNTFARFRRLEKEISEALETGDIFPWAALTRMQAPKFFSDVVESLIGAVFLDA 1310
Query: 754 GCNKEVVFESIRPL 767
+ E+ + IR L
Sbjct: 1311 EGDMEIATDVIRTL 1324
>gi|340516882|gb|EGR47129.1| predicted protein [Trichoderma reesei QM6a]
Length = 1376
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 214/491 (43%), Gaps = 58/491 (11%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTKKCQEGFHLESLETLG 459
+P+++H L +L+A L +LD + ++ + V EAI+ + E + E LE LG
Sbjct: 885 LIPTMIHELGVMLMAKELAYSVLDEVGISDLQL----VKEAISARSASEPVNYERLEFLG 940
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LK+ A + ++ EG LS +DR++SN+ L K + LP FI T+PF + W
Sbjct: 941 DSILKFCACMRAAAEKPDYPEGYLSYWRDRLVSNSRLYKAALEFGLPRFILTKPFTGQKW 1000
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
L + + + ++K+ +KT+ADVVEALIGA GG + + +
Sbjct: 1001 R---------PLYLDEVLQQGDVATPEKRKLSTKTLADVVEALIGASYVDGGLSKAVTCI 1051
Query: 580 DRIGIKVDFVNVPYERQFQVQ-----AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM 634
+ + + +V +R+ + LE L+ Y+F+ +LL+EALTH SY
Sbjct: 1052 SKFVPEGSWTSVDADRESLFARVPDGEPLPPPLEPLEKLIGYTFQKKALLMEALTHASYA 1111
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG 694
R +RLEF+GDAVLD +I L+ P L + +++ VN D A +++HG
Sbjct: 1112 ADFGTRSLERLEFIGDAVLDNIIVTKLFRLKPALPHFRMHTLKTGLVNGDFLAFMTMEHG 1171
Query: 695 LHKH-----ILHASQEL-----YKWINITVDSF---------------------ERLSLE 723
+ A+ E+ Y W + SF E + +
Sbjct: 1172 VQLAADPVVTEEATVEVPETISYLWSFLRQASFPIAIELKETNKRHAALREQIHEAMDND 1231
Query: 724 STFGWE--SETSFPKALGDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMITPETM 777
+ W + S K D+ E++ GA+++DSG C V I ++ ++ E
Sbjct: 1232 DHYPWALLAALSPKKFYSDLFEAVLGAVWIDSGSLAACEGMVAQFGILKYMDRLLRDEVH 1291
Query: 778 RLQPARELNEYCQKH--HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKK 835
P EL + + ++ + G+ +V +KE K
Sbjct: 1292 VQHPKEELGMWANTETVTYELEMKGSEESAGEREYFCKVFVGKREVVEVRGGVNKEEVKT 1351
Query: 836 VASKEVLKSLK 846
+ E L+ L+
Sbjct: 1352 KGATEALRILR 1362
>gi|320037410|gb|EFW19347.1| hypothetical protein CPSG_03731 [Coccidioides posadasii str.
Silveira]
Length = 1465
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 159/355 (44%), Gaps = 56/355 (15%)
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G + E LE LGD FLK A S LF ++ E VK+ ++ N L K KL F
Sbjct: 1022 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYEF 1081
Query: 509 IRTEPFDPKMW--------MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
IR++ F + W G + G+ E N H+L + KT+ADV E
Sbjct: 1082 IRSQSFSRRGWYPEGLTLLQGKGQSKGATE-NKHALAD--------------KTIADVCE 1126
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-------------PYERQFQ--------V 599
ALIGA +N R I V V Y R + V
Sbjct: 1127 ALIGACCLLASKN------HRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSLPKYQTAVV 1180
Query: 600 QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLI 657
A L ++ L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD
Sbjct: 1181 DAAELDLAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMAC 1239
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
++Y+K+P P LT+ + A V+N +V+ GLH H+ H S L I V+
Sbjct: 1240 VEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEI 1299
Query: 718 ERLSLEST---FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
E LES W + PK L D++E+ GAIF+DS + EVV E + L+
Sbjct: 1300 EAAELESGDSPDAWTLTSDPPKCLPDMVEAYIGAIFIDSNFSFEVVEEFFQKFLK 1354
>gi|80979129|gb|ABB54767.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAXMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNXFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1643
>gi|398392319|ref|XP_003849619.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
gi|339469496|gb|EGP84595.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
Length = 1537
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 209/465 (44%), Gaps = 74/465 (15%)
Query: 344 DQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVP 403
D + ++ ++ +N L+ Q++ +K + PE RI P L+T S F P
Sbjct: 961 DNQPVIEAEKVLLRRNMLASPDQQEVSVSTKAY--ICPEPLRISAIPPELAT--SLLFWP 1016
Query: 404 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFH------------ 451
+++HR+++ L+++ + V + L A T +G H
Sbjct: 1017 AVIHRIEAYLISIEGSASV------GVACDPTFALAAFTKDSDNQGEHEAQERVNFQRGM 1070
Query: 452 ---LESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
E LE +GD+FLK A + F N +E V++ +++ N L + ++KL +
Sbjct: 1071 GENYERLEFIGDTFLKTATTISTFIQNPNDNEFEFHVRRMQMLCNKNLFEHALEYKLYEY 1130
Query: 509 IRTEPFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
IR+ F+ + W G +G + + +++ +V G+K T+ADV EALIG
Sbjct: 1131 IRSMAFNRRTWYPEGMKLMAGTGVIKGQEKEMYHSEMTHVLGKK-----TIADVCEALIG 1185
Query: 565 A-FLS-----------------------TGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ 600
A FL+ ++ ++ +D K ++ Y+
Sbjct: 1186 AAFLTHNQPDEKWQPHHWEPAIQAVTKLVKSDDHTMLTMD--DYKAAYLLPDYQTAHVTA 1243
Query: 601 AER-LVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLDYLI 657
+R L LE YSF P LL A +H S YM ++P YQRLEFLGDA+LD
Sbjct: 1244 VQRDLAEKIQLEHA--YSFNYPRLLYSAFSHPSNPYMHAQVPN-YQRLEFLGDALLDQAS 1300
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
YL+ K+P P LT+ + A V+N V G HKH+ H+ L K I+ VD
Sbjct: 1301 ISYLFYKFPAADPQWLTEHKMAMVSNKFLGALCVNIGFHKHLRHSHSSLGKQIHAYVD-- 1358
Query: 718 ERLSLESTFG------WESETSFPKALGDIIESLSGAIFVDSGCN 756
E + ++ G W + + PK L D+IES GA+F+DS N
Sbjct: 1359 ELVEARTSSGPDCRDYWTTVSDPPKCLPDVIESFVGAMFIDSNFN 1403
>gi|358370394|dbj|GAA87005.1| dicer-like protein 2-1 [Aspergillus kawachii IFO 4308]
Length = 1396
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 192/450 (42%), Gaps = 65/450 (14%)
Query: 352 RRIFHAQNYLSK-CRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQ 410
R + H Q +K E SKI L E C I P + + F F V I+ RL+
Sbjct: 854 RNLLHRQTLAAKQLDTETPDNSSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDRLE 910
Query: 411 SLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQ 469
+ L+A L + +L D ++ V+ AIT Q + + E GDS LK+ S
Sbjct: 911 ATLVATRLCETILRDLEFSSI----RHVITAITAPSAQSLTNYQRYEFFGDSVLKFTVSC 966
Query: 470 QLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSY 529
QLF + N HEG LS +D I+ N+ L + D L FI + F P+ W P
Sbjct: 967 QLFFQHPNWHEGYLSQGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWTAP------- 1019
Query: 530 ELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI----FLDRIGIK 585
L +E+ ++ + +K +ADVVEALIGA GG FL + ++
Sbjct: 1020 ------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVNLE 1073
Query: 586 -VDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
+D + + +N HL + + Y+F SLLVE+LTH S + YQR
Sbjct: 1074 HIDRTTTTAPSTPEGTTKHTLNDDHLMTHIGYTFTHKSLLVESLTHPSCQFDTTTQSYQR 1133
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL---------------- 688
LEFLGDAVLD I L + + G +T ++ A VN + A
Sbjct: 1134 LEFLGDAVLDMAIMSTLLSHPHEIPQGQMTKIKHAVVNANLLAFFCMEFALVEKRSTVQI 1193
Query: 689 ----------SSVKHGLH---------KHILHA-SQELYKWINITVDSFERLSLESTFGW 728
SS H L H+ A L + ++ L ++ W
Sbjct: 1194 TPSGTASLNPSSTDHKLELWRFMRYQGAHLQTARDAALARHASLRKSIIHGLQHSPSYPW 1253
Query: 729 E--SETSFPKALGDIIESLSGAIFVDSGCN 756
+ S+ + K DIIES+ GAIF+DS N
Sbjct: 1254 KYLSQLNADKFFSDIIESILGAIFIDSHGN 1283
>gi|440632076|gb|ELR01995.1| hypothetical protein GMDG_05164 [Geomyces destructans 20631-21]
Length = 1634
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 195/791 (24%), Positives = 313/791 (39%), Gaps = 117/791 (14%)
Query: 35 PTPKFDINKEMGI---CTLYLPNNCPIQTVIAQ-GNIKTL-KQTACLEACKKLHQIGALT 89
P P++ + MG+ C + LP N P+ I + N K + K +A EAC L + L
Sbjct: 725 PHPEYMMTA-MGVKYVCEVILPENSPVHGAIGRPANTKQVAKCSAAFEACLNLRKGKHLD 783
Query: 90 DNLLP---DVVVEEHDAQKHGNEPYDAEHPIYFPPEL--VNQCPQDTKITYHCYLIELKQ 144
+ LL D +AQ + ++ + P + + P + +T +I LK
Sbjct: 784 EYLLSTFKDRGPAMRNAQLAITSKANTDYDMRTKPSMWATGETPSELFLT----IISLKD 839
Query: 145 NFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLK-HLGKIQLTPDKVLLCRR 203
D P+ + R L S + F L G+ T + +G + ++ + + L
Sbjct: 840 PGQLDRPSQPLGFLTRGPLPSFPQ---FQLYFGSGKHTAAVSTAVGSLPVSSETLELINT 896
Query: 204 FQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCD-IG 262
F + +F+ +I + D+ ++ Y ++P + D + + P D I
Sbjct: 897 FTLRIFK-----------DIFSKEYESDSAKMPYFIVPIA----DTDAESQTRLPADLIS 941
Query: 263 LKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHL--------- 313
K S N + +S P + + P G T + H
Sbjct: 942 WDILKTVS--DNQWLTWDESTP--ESFFEDKYILDPFDGSRKIWTRKVTHEYKPLDPVPP 997
Query: 314 -NANSLFTRNDGGAITYKKHYEERYGIQLCFDQ-ELLLNGRRIFHAQNYLSKCRQEKQRE 371
A L +N+ + Y + + F + + ++ G I +N+L
Sbjct: 998 NTATRLARKNNSNILEYSCSLFKVARSKRTFSETQPVIEGDVIPFRRNFLDDHDDPANSG 1057
Query: 372 PSKISFELPPELCRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNLKNML--- 422
P+K C ++ P+++S ++TF P+I+HR++S L+AV +ML
Sbjct: 1058 PTK---------CYVVPEPLTISALPTRIVAMAYTF-PAIIHRIESYLVAVEACSMLHLP 1107
Query: 423 -----LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQN 477
CM T T + E + G + E LE LGD FLK A S L+ + +
Sbjct: 1108 ISADLALECMTKDTRNTDEHGEEQVEFQRGMGNNYERLEFLGDCFLKMATSISLYTLHPD 1167
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLF 537
+E VK+ +I N L + KL FIR++ F+ + W G L
Sbjct: 1168 SNEFDFHVKRMLMICNKNLMDVALQLKLYEFIRSQAFNRRAWYPEG----------LVLK 1217
Query: 538 NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------- 586
+ + K+ KT+ADV EALIGA L T + R ++
Sbjct: 1218 KGKAAQAPKKHKLGDKTIADVSEALIGAALLTPSNGHAMDHAVRAVTELVYSTDHAIEKW 1277
Query: 587 -DFVNVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLP--EIPR 640
D+ + ++Q+ A +E NY F P LL A TH SY +P
Sbjct: 1278 EDYFKGYTKPKYQIAASTASQRNVAEQIEITHNYHFHYPRLLRSAFTHPSYPFAYERVPN 1337
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
YQRLEFLGD++LD +L++++PT P LT+ + A V+N V G H +L
Sbjct: 1338 -YQRLEFLGDSLLDMACVNFLFHRFPTKDPQWLTEHKMAMVSNQFLGAVCVALGFHTQLL 1396
Query: 701 HASQELYKWINITV------------DSFERLSLESTFG---WESETSFPKALGDIIESL 745
+ + I V D+ L S W PK L DIIE+
Sbjct: 1397 QFNPIIQGSITEYVCEITEAREQAEQDAIRHGKLASECARDYWLHTKLPPKCLPDIIEAY 1456
Query: 746 SGAIFVDSGCN 756
GAIFVDS N
Sbjct: 1457 IGAIFVDSSFN 1467
>gi|80979119|gb|ABB54762.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTELKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1643
>gi|449549195|gb|EMD40161.1| hypothetical protein CERSUDRAFT_112373 [Ceriporiopsis subvermispora
B]
Length = 1511
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 203/431 (47%), Gaps = 66/431 (15%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSIM L ++L+ LL + +P + + A T QE + + LETLGD
Sbjct: 976 LIPSIMRWCSITLTVMSLRKQLLAKNPIS-EVPLALLTTATTAPVAQEQTNYQRLETLGD 1034
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW- 519
+ LK+ AS QLF Y HEG L+ +KD +SNA L + L +I E F P+ W
Sbjct: 1035 TVLKFLASLQLFAQYPLWHEGYLARRKDHAVSNARLAREALGKCLYRWIIRERFVPRKWK 1094
Query: 520 -MIPGDNSGSYELN-DHSLFNER-KIYVTGRKKVK-----------------SKTVADVV 559
+ + N +HS+ +E+ I V ++V +K +ADVV
Sbjct: 1095 PLYRVQEPSTIITNAEHSISSEQDSIPVEAEQEVDTELQKKLKKKKQSQQLSTKVLADVV 1154
Query: 560 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQA------ERLVNVRHLESL 613
EALIGA GG ++ G+ + + VP +R ++ A E + +E +
Sbjct: 1155 EALIGASYEHGGFDLAADCAALFGMGLTWKKVP-DRISEILARTEPLEEPPTQLYLVERI 1213
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK-YPTLSPGD 672
LNY+F+ LLVEALTH SY Y+RLEFLGD LD ++T YLY+ +PG
Sbjct: 1214 LNYTFKRKELLVEALTHASYHGEHAAMSYERLEFLGDCALDMVVTDYLYHAPGKEYTPGH 1273
Query: 673 LTDMRSASVNNDCYAL-----------------------SSVKHG---LHKHILHASQEL 706
+ + + VN+ A ++ +H LH+ ++H+S+ +
Sbjct: 1274 MHLRKESLVNSHFLAFICLRAFTTTEATSAHWTPKKGTSTTTEHQQIHLHQCLMHSSRRV 1333
Query: 707 YKWINITVDSFER--------LSLESTFGWESETSF--PKALGDIIESLSGAIFVDSGCN 756
+ +I FE+ L + + W + TS PK L D++ESL GA+++D+ +
Sbjct: 1334 LEDQHIAFSRFEKSGRKIEEMLLRGTMYPWAALTSLQAPKFLSDMLESLLGAVYLDTEGS 1393
Query: 757 KEVVFESIRPL 767
E V E +R L
Sbjct: 1394 LEAVREVMRVL 1404
>gi|80979125|gb|ABB54765.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1643
>gi|80979117|gb|ABB54761.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1643
>gi|80979121|gb|ABB54763.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1643
>gi|80979127|gb|ABB54766.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNEPPKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1643
>gi|195487840|ref|XP_002092062.1| Dcr-2 [Drosophila yakuba]
gi|194178163|gb|EDW91774.1| Dcr-2 [Drosophila yakuba]
Length = 1730
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1203 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1262
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1263 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1322
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1323 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1382
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1383 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1442
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1443 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1502
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1503 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1562
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1563 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1622
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1623 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1654
>gi|80979123|gb|ABB54764.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGBFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P LE
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELE 1643
>gi|322704697|gb|EFY96289.1| Dicer-like protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 1476
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 184/399 (46%), Gaps = 49/399 (12%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKVLEAITTKK----CQEGFHLESLE 456
+P ++ ++S +A +D C ++ I LEA+T + Q + E LE
Sbjct: 991 LPVAIYSIESAAIA-------MDACGSIDLAIYPPLALEALTKGEEDVDVQTSKNYERLE 1043
Query: 457 TLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP 516
LGD+FLK A + LF N +E V++ +I N L D L ++R+ FD
Sbjct: 1044 FLGDAFLKMATTISLFTLIPNRNEFEYHVERMILICNKNLFNHAVDRGLQEYVRSRGFDR 1103
Query: 517 KMWMIPGDNSGSYELNDHSLFNERKIYVTG-RKKVKSKTVADVVEALIGAFLSTGGENVG 575
+ W D L +K G +++ K++ADV EALIGA T E +
Sbjct: 1104 RSW-----------YPDLVLRKGKKHKPVGLTQRLADKSIADVCEALIGAAYMTEPEGMD 1152
Query: 576 LIFLD----------RIGIKVDFVNVPYERQFQVQAER---LVNVRHLESLLNYSFRDPS 622
L R+ D+ + +Q R L+ V +++ + Y+FR P
Sbjct: 1153 LAVKAVTVMVQSKNHRMKKYSDYYEKYVQPAWQTIPSRPIELLAVGKVKASIGYNFRSPK 1212
Query: 623 LLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
LL A H SY PE+P YQRLEFLGDA+LD I +L+ +YP P LT+ + A
Sbjct: 1213 LLRSAFKHPSYPYEPELPN-YQRLEFLGDALLDVAIVDFLFQRYPLADPQWLTEHKMAMA 1271
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG------WESETSFP 735
+N ++ V+ GLH+HIL + I V+ E+ ++ G W + P
Sbjct: 1272 SNHFFSFLCVELGLHRHILSTGSSIMGHIAGFVEQIEKAKSQTEDGVLQLDFWLNTEHPP 1331
Query: 736 KALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
KAL DI+E++ GA++ DS + + S+R I P
Sbjct: 1332 KALSDILEAVVGAMYEDSKYD----YNSVRNFFTKFIAP 1366
>gi|357462157|ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 783
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 136/244 (55%), Gaps = 9/244 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
++ +E++L Y F++ LL EA TH +Y E Y+RLE++GD+VL+ +IT ++ Y
Sbjct: 443 SLHEVEAILEYEFKNILLLEEAFTHCTYG-AENGLSYERLEYIGDSVLNLMITTEQFHAY 501
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
PTL+PG LT +R+A+V+ + A ++K+GLH+++ H L I +F + +E
Sbjct: 502 PTLAPGHLTRLRAANVDTEKLARVAIKYGLHRYVRHKKPLLGDEIQ----AFIKEVVEYP 557
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAREL 785
PK L DI+ES GAIFVD G + E V++ + LL P+I P T++ P+ EL
Sbjct: 558 LHSNGLIDVPKILADIVESTIGAIFVDCGSSIETVWKFFKKLLVPVIDPHTIQRHPSAEL 617
Query: 786 NEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
NE+CQK ++ R K + VEV + L + KE A A+K L+ +
Sbjct: 618 NEFCQKRGLKLQF----RDLWKVSEIVEVLISEELVGSGKCGSKKEIAHNRAAKNALEYM 673
Query: 846 KASF 849
K F
Sbjct: 674 KRKF 677
>gi|357462175|ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 565
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 131/237 (55%), Gaps = 9/237 (3%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E++L Y F++ LL EA THG+Y E Y+RLE++GD+VL+ +IT + YPTL+
Sbjct: 230 VEAILEYEFKNKLLLEEAFTHGTYGA-ENGLSYERLEYVGDSVLNLMITKEQFQAYPTLA 288
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
PG LT +R+A+V+ + A ++KHGLH+++ H L I F + E
Sbjct: 289 PGHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQ----EFTKGIAEYPLHSN 344
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
PK+L DI+ES GAIFVD G + E V++ + LLEP+I P T++ P EL+E C
Sbjct: 345 GLIDVPKSLADIVESTIGAIFVDCGSSVETVWKVFKKLLEPIIDPNTIQRHPVTELHEVC 404
Query: 790 QKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
QK ++ R K + +EV N + KE A A+K L++++
Sbjct: 405 QKKSLKLQF----RDLWKETMRIEVLINEEFVGSGVYGSKKEIAHNRAAKNALENME 457
>gi|80979133|gb|ABB54769.1| Dicer-2 [Drosophila teissieri]
Length = 1719
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 180/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVFDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPK-MWMIP------------------GDNSGSYELNDHSLFN 538
D +P I T F P+ W+ P G + L D +L
Sbjct: 1252 YCLSDTDIPKKISTILFTPRYTWLPPSISLPHNVLALWREKPELASMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESLVRGYCSDINYNSFVEGCRANAQSHHAGADFSAEVNFCVGLVTIADKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQPTTLDLDDDLDMTDLKNALKSISHEEEQNDPAKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E L AI++D C EV+F +P L+
Sbjct: 1612 VLEXLIAAIYLD--CRDLQRTWEVIFNLFKPELQ 1643
>gi|422398915|ref|NP_001116485.2| endoribonuclease Dicer-1 [Apis mellifera]
Length = 1952
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 167/362 (46%), Gaps = 74/362 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---DFVNV-----PYER------ 595
+ K++AD VEALIGA+L G L+F+ +GI V + +N+ P +R
Sbjct: 1590 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPKDRIPGSTP 1649
Query: 596 -----------------------------QFQVQAER-----LVNVRHLESLLNYSFRDP 621
++ V E L LE + Y F D
Sbjct: 1650 FVKGKNEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKNIGYKFHDI 1709
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1710 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGALTDLRSALV 1769
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE---------- 731
NN +A +V+ G HK+ H S L +I ++ F R+ E+ E
Sbjct: 1770 NNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSISEEYYLIGEEECE 1825
Query: 732 ----TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAREL 785
PKALGD+ ESL+GAI++DSG + + V+ +++ I + + P REL
Sbjct: 1826 EAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIREL 1885
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V G+ FK + AK A+K LK
Sbjct: 1886 LELEPETAKFGKPEKLAD--GRRVRVTVDVFGKGS-FKGIGRNY--RIAKCTAAKCALKK 1940
Query: 845 LK 846
LK
Sbjct: 1941 LK 1942
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
P + S L + + + L +H + ++ +L+A+T +G +LE LET+GDS
Sbjct: 1389 TPKFTYHFDSNLFSFDFQPKLENHPGPSPSL----ILQALTMSNANDGINLERLETIGDS 1444
Query: 462 FLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP-KMWM 520
FLKYA + L+ TY N HEG LS + + +SN L +LG L + F+P W+
Sbjct: 1445 FLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWL 1504
Query: 521 IP 522
P
Sbjct: 1505 PP 1506
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1409 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1465
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1466 LSHLRSKQVSN 1476
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQL-CFDQELL----LNGRRIFH 356
Q +Y+ + +LN S F ND G T++++Y ++Y IQ+ DQ LL + R F
Sbjct: 942 QYFYVAEICTNLNPKSSFPGNDYG--TFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFL 999
Query: 357 AQNYLSK------CRQEKQREPSKISFE----LPPELCRIIMGPMSLSTFYSFTFVPSIM 406
Y+++ E+ + + + E L ELC I P S + +P I+
Sbjct: 1000 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELCAI--HPFPASLWRQAVCLPCIL 1057
Query: 407 HRLQSLLLAVNLK 419
+R+ +LLLA ++
Sbjct: 1058 YRINALLLANQIR 1070
>gi|134081603|emb|CAK46537.1| unnamed protein product [Aspergillus niger]
Length = 1352
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 196/448 (43%), Gaps = 65/448 (14%)
Query: 352 RRIFHAQNYLSKCRQEKQREP---SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
R + H Q +K Q P SKI L E C I P + + F F V I+ R
Sbjct: 819 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 873
Query: 409 LQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
L++ L+A L + +L D ++ ++ AIT Q + + E GDS LK+
Sbjct: 874 LEATLVATRLCETILRDLEFSSI----RHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 929
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
S QLF + N HEG LS +D I+ N+ L + D L FI + F P+ W P
Sbjct: 930 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 984
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
L +E+ ++ + +K +ADVVEALIGA GG + R +V+
Sbjct: 985 --------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVN 1036
Query: 588 FVNVPYERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
N+ + +N HL + + Y+F + SLLVE+LTH S + YQR
Sbjct: 1037 LENIDRTTAPMPKDGVTNHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQR 1096
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH------ 698
LEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1097 LEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTNVQV 1156
Query: 699 ------ILHASQ---ELYKWI-----------NITVDSFERLSLESTFGWESETSFP--- 735
L+ S EL++++ ++ + L G + S+P
Sbjct: 1157 TPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYPWKS 1216
Query: 736 -------KALGDIIESLSGAIFVDSGCN 756
K DIIES+ GAIF+DS N
Sbjct: 1217 LSQLNADKFFSDIIESILGAIFIDSHGN 1244
>gi|240275432|gb|EER38946.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
Length = 495
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 151/315 (47%), Gaps = 29/315 (9%)
Query: 466 AASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN 525
A S LF ++ E VK+ +I N L KL F+RT+ F + W G
Sbjct: 2 ATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVRTQGFSRRNWYPEGIK 61
Query: 526 SGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------I 577
+ S N ++ + KT+AD+ EALIGA L +GG+ +
Sbjct: 62 LLQGKAKSESAQN--------KQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTV 113
Query: 578 FLDRIGIKV-------DFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTH 630
F+D +V D ++P + Q A +L + + + L Y F P LL A TH
Sbjct: 114 FVDSDNHRVSDWNSYIDLYSLPSYQIVQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTH 173
Query: 631 GSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL 688
SY +P CYQRLEFLGD++LD + YLY+ YP P LT+ + A V+N
Sbjct: 174 ASYPSAWSTVP-CYQRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGA 232
Query: 689 SSVKHGLHKHILHASQELYKWINITVDSFERL---SLESTFGWESETSFPKALGDIIESL 745
+VK GLHKH+L+ S L+ I + E S +S W + + PK L D++E+
Sbjct: 233 VTVKLGLHKHLLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCLPDMLEAY 292
Query: 746 SGAIFVDSGCNKEVV 760
GAIFVDS + EVV
Sbjct: 293 IGAIFVDSNFSFEVV 307
>gi|346327498|gb|EGX97094.1| RNA helicase/RNAse III, putative [Cordyceps militaris CM01]
Length = 1392
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 196/437 (44%), Gaps = 65/437 (14%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL-EAITTKKCQEGFHLESLETLG 459
VPSI+H ++++L+ L LLD + I +L +AI+ + E H E LE LG
Sbjct: 904 LVPSIVHIIETMLIVRQLSVTLLD----PLGISDYFLLRDAISARSAMEPTHYERLEFLG 959
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LKY AS Q T + EG LS K+R+I+N+ L + + L FI + PF + W
Sbjct: 960 DSILKYCASMQAAVTNLDWSEGYLSKYKERLIANSRLSRAAVETGLSRFILSMPFTGQKW 1019
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
+ L K+ + ++ + +K +ADVVEALIG + GG + L
Sbjct: 1020 R-------PFHLET---VLAGKMKPSPKRNLSTKVLADVVEALIGVAYTVGGIPKTIQCL 1069
Query: 580 DRIGIKVDFVNVPYERQ--FQVQAERLVNVRHL---ESLLNYSFRDPSLLVEALTHGSYM 634
+ D+++ R+ F VN +L E L+ YSF SLL+EA TH SY+
Sbjct: 1070 SIFITECDWMDPSDCREEFFSCAPSHGVNSSYLHVLEELVGYSFTKKSLLLEATTHASYI 1129
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG 694
R ++RLEF+GD++LDY+I L N P L+ + +++A VN D A S
Sbjct: 1130 GDIFGRSWERLEFIGDSILDYIIVNKLINHTPPLAHSQMHIIKTAMVNMDFLAFIS---- 1185
Query: 695 LHKHILHASQE----------------LYKWINITVDSFERLSLEST------------- 725
L +H L ++ L+K+I + LE+
Sbjct: 1186 LEEHELSQTESFVTESGTVLTENKHTALWKFIRHSSSGIGPAQLETAKRHVQFRGAILRA 1245
Query: 726 ------FGWESETSF--PKALGDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMIT 773
+ W K D++E++ GA++VDSG C + I P L+ ++
Sbjct: 1246 IRDGDHYPWHILIKLHASKFYSDLVEAVVGALWVDSGSLAPCEAFLARVGILPYLDRVLA 1305
Query: 774 PETMRLQPARELNEYCQ 790
P EL + Q
Sbjct: 1306 DGVHMQHPKEELGKLAQ 1322
>gi|383862048|ref|XP_003706496.1| PREDICTED: endoribonuclease Dcr-1-like [Megachile rotundata]
Length = 1952
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 167/362 (46%), Gaps = 74/362 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-----------------NVP 592
+ K++AD VEALIGA+L G L+F+ +GI V + + P
Sbjct: 1590 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPMEEICIVQETEPEERIPGSTP 1649
Query: 593 YERQFQVQAE-RLVNVRH------------------------------LESLLNYSFRDP 621
Y + Q E + +R+ LE + Y F D
Sbjct: 1650 YVKGTNDQGEVTWIQIRYGKLEEPQNPLLRYIPNPEQELLMMLDGYEELEKNIGYKFNDI 1709
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A TH SY ++ CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1710 SYLLQAFTHASYQPNKLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALV 1769
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE---------- 731
NN +A +V+ G HK+ H S L ++ ++ F R+ E+ E
Sbjct: 1770 NNTIFASLAVRCGFHKYFRHLSPGL----SVVINRFVRIQEENGHSISEEYYLIGEEKCE 1825
Query: 732 ----TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAREL 785
PKALGD+ ESL+GAI++DSG + + V+ +++ I + + P REL
Sbjct: 1826 EAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYVIMKNEIEQFSTNVPKSPIREL 1885
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V G+ FK + AK A+K LK
Sbjct: 1886 LELEPETAKFGKPEKLAD--GHRVRVTVDVFGKGS-FKGIGRNY--RIAKCTAAKCALKK 1940
Query: 845 LK 846
LK
Sbjct: 1941 LK 1942
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1418 SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1477
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1478 NLYRLGRQKMLGESMIATKFEPHDNWLPP 1506
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1409 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1465
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1466 LSHLRSKQVSN 1476
>gi|317035030|ref|XP_001400925.2| ATP-dependent helicase dcl2 [Aspergillus niger CBS 513.88]
Length = 1407
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 196/448 (43%), Gaps = 65/448 (14%)
Query: 352 RRIFHAQNYLSKCRQEKQREP---SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
R + H Q +K Q P SKI L E C I P + + F F V I+ R
Sbjct: 854 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 908
Query: 409 LQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
L++ L+A L + +L D ++ ++ AIT Q + + E GDS LK+
Sbjct: 909 LEATLVATRLCETILRDLEFSSI----RHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 964
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
S QLF + N HEG LS +D I+ N+ L + D L FI + F P+ W P
Sbjct: 965 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 1019
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
L +E+ ++ + +K +ADVVEALIGA GG + R +V+
Sbjct: 1020 --------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVN 1071
Query: 588 FVNVPYERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
N+ + +N HL + + Y+F + SLLVE+LTH S + YQR
Sbjct: 1072 LENIDRTTAPMPKDGVTNHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQR 1131
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH------ 698
LEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1132 LEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTNVQV 1191
Query: 699 ------ILHASQ---ELYKWI-----------NITVDSFERLSLESTFGWESETSFP--- 735
L+ S EL++++ ++ + L G + S+P
Sbjct: 1192 TPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYPWKS 1251
Query: 736 -------KALGDIIESLSGAIFVDSGCN 756
K DIIES+ GAIF+DS N
Sbjct: 1252 LSQLNADKFFSDIIESILGAIFIDSHGN 1279
>gi|80979131|gb|ABB54768.1| Dicer-2 [Drosophila santomea]
Length = 1719
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 181/454 (39%), Gaps = 124/454 (27%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHSLFN 538
D +P I T F P+ +P S G + L D +L
Sbjct: 1252 YCLSDTDIPKXISTILFTPRYTWLPPSISLPHNVLALWRENPXLAGMVGPHNLRDLALGE 1311
Query: 539 ERKI-----------------------------------YVTGRKKVKSKTVADVVEALI 563
E + + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNSFVEGCRANAQTHHAGADFSTEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LVNVR 608
G + G L+ I + P + ++ L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE---------- 718
+PG LTD+RSA VNN A V+H LH IL + +L + I V E
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 719 RLSLEST--------------------------------------FGWESETSFPKALGD 740
R+ LE F + PKALGD
Sbjct: 1552 RILLEEADVQPTTLDLDDDLDMTDLKNALKSISHEEEQNYPPKGDFNMSTNVDVPKALGD 1611
Query: 741 IIESLSGAIFVDSGCNK-----EVVFESIRPLLE 769
++E+L AI++D C EV+F +P L+
Sbjct: 1612 VLEALIAAIYLD--CRDLQRTWEVIFNLFKPELQ 1643
>gi|302511053|ref|XP_003017478.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
gi|291181049|gb|EFE36833.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
Length = 1510
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 201/445 (45%), Gaps = 67/445 (15%)
Query: 367 EKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC 426
E Q+ P + + + E +I + L+T F F P+++ R++S L+A L+ C
Sbjct: 973 ENQKSPP-VDYYVCAEALKISAISVPLAT-QIFVF-PAMIWRMESYLIA-------LEAC 1022
Query: 427 MQ-NVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQL 471
+ + IP LEA+T ++ +E G + E LE LGD FLK A S L
Sbjct: 1023 EKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYERLEFLGDCFLKMATSISL 1082
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------D 524
F ++ E VK+ +I N L ++ FIR+ F + W G D
Sbjct: 1083 FAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRSFSRRAWYPEGLTLLKGKD 1142
Query: 525 NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN--------VGL 576
+H+L + KT+ADV EALIGA L GG +
Sbjct: 1143 KKEGPNGPEHALAD--------------KTIADVCEALIGASLLAGGPDHKFDMATKAVT 1188
Query: 577 IFLD----RIGIKVDF---VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALT 629
+F++ R+ D+ ++P + A + ++S L Y F+ P LL A
Sbjct: 1189 VFVNSDDHRVEKWADYSRLYSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFM 1248
Query: 630 HGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
H SY +P CYQRLEFLGD++LD + +L+ +YP P LT+ + A V+N
Sbjct: 1249 HPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLG 1307
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFE--RLSLESTF-GWESETSFPKALGDIIES 744
+V LH H++H S L I + + ++ +E W PK L DI+E+
Sbjct: 1308 SLAVSLNLHVHLIHISNTLQGQITSYTEELQAMKIKMEGNLEAWTYTNEPPKCLPDIVEA 1367
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLE 769
GAIFVDS N +VV + R ++
Sbjct: 1368 YLGAIFVDSNFNFDVVDDFFRKFIQ 1392
>gi|188593364|emb|CAO78751.1| Oikopleura cytoplasmic RNAse III enzyme Dicer [Oikopleura dioica]
Length = 1814
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 175/357 (49%), Gaps = 50/357 (14%)
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV-TGRKKV 550
SN + L +LPG + FD +W P D G + L IY + +
Sbjct: 1446 SNQLMSFLDRKKQLPG----DEFDISVWK-PLDTKGKPINTEEPL-----IYNHYSDQYL 1495
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHL 610
K++AD +EALIGA+L G FL +G+ V + ++ + E
Sbjct: 1496 TDKSIADCMEALIGAYLKATGIEATQQFLCYMGLIV-LPSSALDKLTRTYGE-------F 1547
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT--L 668
E + Y+F++ L+++LTH SY ++ CYQRLEFLGDAVLD+LIT +L++ +PT
Sbjct: 1548 EKKIGYTFKNKGYLLQSLTHASYQYNQVTNCYQRLEFLGDAVLDFLITRHLFD-HPTKRF 1606
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-------------D 715
SPG+LTD+R+A VNN+ +A +VK HK++ + +L+ I V
Sbjct: 1607 SPGELTDLRAALVNNNIFAALAVKFDFHKYLYALTPDLHNVIRDYVLYCQTRQDVEGMEA 1666
Query: 716 SFERLSLESTFGWESET-------SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
+R+ LE E PK LGDI ES++GAI++DSG N + V+ RP+L
Sbjct: 1667 VLKRIRLEEEPEEEEGDHEDSEDIEVPKVLGDIYESVAGAIYLDSGMNLDAVWGVYRPML 1726
Query: 769 EPMITPETMR--LQPARELNEYCQKHHFSMKKTVAP--RINGKAAVTVEVHANGTLF 821
+ I ++ P REL E K AP R +GK VTV + N F
Sbjct: 1727 QKYIDKYSINPPRSPIRELLEL----EPETAKFSAPEKRADGKYRVTVHIANNKGRF 1779
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 425 HCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
H ++NV ++L+ +T K +GF+LE LE LGD FLKY+ + L+ Y++ HEG LS
Sbjct: 1282 HNIENVGPTPDQILQTLTLSKSSDGFNLERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLS 1341
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPF----DPKMWMIPG 523
+ + +SN L +LG + +PG + E F W+ PG
Sbjct: 1342 FFRSKKVSNRNLFRLGVYNDIPGRMVAEQFMQNDTGGNWLPPG 1384
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE LGD L Y +TVYLY KY G L+ RS V+N
Sbjct: 1310 ERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFRSKKVSN 1350
>gi|302662009|ref|XP_003022664.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
gi|291186623|gb|EFE42046.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
Length = 1510
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 201/445 (45%), Gaps = 67/445 (15%)
Query: 367 EKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC 426
E Q+ P + + + E +I + L+T F F P+++ R++S L+A L+ C
Sbjct: 973 ENQKSPP-VDYYVCAEALKISAISVPLAT-QIFVF-PAMIWRMESYLIA-------LEAC 1022
Query: 427 MQ-NVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQL 471
+ + IP LEA+T ++ +E G + E LE LGD FLK A S L
Sbjct: 1023 EKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYERLEFLGDCFLKMATSISL 1082
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG-------D 524
F ++ E VK+ +I N L ++ FIR+ F + W G D
Sbjct: 1083 FAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRSFSRRAWYPEGLTLLKGKD 1142
Query: 525 NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN--------VGL 576
+H+L + KT+ADV EALIGA L GG +
Sbjct: 1143 KKEGPNGPEHALAD--------------KTIADVCEALIGASLLAGGPDHKFDMATKAVT 1188
Query: 577 IFLD----RIGIKVDF---VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALT 629
+F++ R+ D+ ++P + A + ++S L Y F+ P LL A
Sbjct: 1189 VFVNSDDHRVEKWADYSRLYSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFM 1248
Query: 630 HGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
H SY +P CYQRLEFLGD++LD + +L+ +YP P LT+ + A V+N
Sbjct: 1249 HPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLG 1307
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFE--RLSLESTF-GWESETSFPKALGDIIES 744
+V LH H++H S L I + + ++ +E W PK L DI+E+
Sbjct: 1308 SLAVSLNLHVHLIHISNTLQGQITSYTEELQAMKIKMEGNLEAWTYTNEPPKCLPDIVEA 1367
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLE 769
GAIFVDS N +VV + R ++
Sbjct: 1368 YLGAIFVDSNFNFDVVDDFFRKFIQ 1392
>gi|350639413|gb|EHA27767.1| hypothetical protein ASPNIDRAFT_211065 [Aspergillus niger ATCC 1015]
Length = 1372
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 196/448 (43%), Gaps = 65/448 (14%)
Query: 352 RRIFHAQNYLSKCRQEKQREP---SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
R + H Q +K Q P SKI L E C I P + + F F V I+ R
Sbjct: 839 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 893
Query: 409 LQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
L++ L+A L + +L D ++ ++ AIT Q + + E GDS LK+
Sbjct: 894 LEATLVATRLCETILRDLEFSSI----RHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 949
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
S QLF + N HEG LS +D I+ N+ L + D L FI + F P+ W P
Sbjct: 950 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 1004
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
L +E+ ++ + +K +ADVVEALIGA GG + R +V+
Sbjct: 1005 --------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVN 1056
Query: 588 FVNVPYERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
N+ + +N HL + + Y+F + SLLVE+LTH S + YQR
Sbjct: 1057 LENIDRTTAPMPKDGVTNHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQR 1116
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH------ 698
LEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1117 LEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTNVQV 1176
Query: 699 ------ILHASQ---ELYKWI-----------NITVDSFERLSLESTFGWESETSFP--- 735
L+ S EL++++ ++ + L G + S+P
Sbjct: 1177 TPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYPWKS 1236
Query: 736 -------KALGDIIESLSGAIFVDSGCN 756
K DIIES+ GAIF+DS N
Sbjct: 1237 LSQLNADKFFSDIIESILGAIFIDSHGN 1264
>gi|158706449|sp|A2R345.2|DCL21_ASPNC RecName: Full=Dicer-like protein 2-1; Includes: RecName:
Full=Endoribonuclease dcl2-1; Includes: RecName:
Full=ATP-dependent helicase dcl2-1
Length = 1387
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 196/448 (43%), Gaps = 65/448 (14%)
Query: 352 RRIFHAQNYLSKCRQEKQREP---SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
R + H Q +K Q P SKI L E C I P + + F F V I+ R
Sbjct: 854 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 908
Query: 409 LQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
L++ L+A L + +L D ++ ++ AIT Q + + E GDS LK+
Sbjct: 909 LEATLVATRLCETILRDLEFSSI----RHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 964
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
S QLF + N HEG LS +D I+ N+ L + D L FI + F P+ W P
Sbjct: 965 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 1019
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
L +E+ ++ + +K +ADVVEALIGA GG + R +V+
Sbjct: 1020 --------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVN 1071
Query: 588 FVNVPYERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
N+ + +N HL + + Y+F + SLLVE+LTH S + YQR
Sbjct: 1072 LENIDRTTAPMPKDGVTNHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQR 1131
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH------ 698
LEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1132 LEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTNVQV 1191
Query: 699 ------ILHASQ---ELYKWI-----------NITVDSFERLSLESTFGWESETSFP--- 735
L+ S EL++++ ++ + L G + S+P
Sbjct: 1192 TPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYPWKS 1251
Query: 736 -------KALGDIIESLSGAIFVDSGCN 756
K DIIES+ GAIF+DS N
Sbjct: 1252 LSQLNADKFFSDIIESILGAIFIDSHGN 1279
>gi|444841769|gb|AGE12617.1| Dicer 2 [Nilaparvata lugens]
Length = 1448
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 164/337 (48%), Gaps = 56/337 (16%)
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L+ +T + F+LE LETLGDSFLKYA S LF + EG L++ K ++I N L
Sbjct: 1039 LQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIKGKVIGNRNLF 1098
Query: 498 KLGCDHKLPGFIRTEPFDPKM-WMIPG---DNSGS---YELN------------------ 532
G L I+ F+ + W+ PG D + ELN
Sbjct: 1099 YCGEQKGLGSIIKAVEFNTESDWIAPGFCVDRTVQNLFRELNINPRYLYEIPLSRDEIEC 1158
Query: 533 --------------------DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
D N + ++ + +KTV+D VEAL+G ++ + G
Sbjct: 1159 GKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVISNKTVSDSVEALLGLYIQSYGL 1218
Query: 573 NVG---LIFLDRIGIKVDFVNVPYERQFQVQ-----AERLVNVRH---LESLLNYSFRDP 621
G L +L I K+ +V +++ + + ++ H LE L+NY F++
Sbjct: 1219 EKGFDMLRWLKVIDPKLITPDVYTKKKVEPTILFKGGQIDFHIHHPDYLEKLINYKFKNR 1278
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
+ L++AL+H +Y I YQRLEFLGDA+LD+L+T ++Y L+PG+LTD+RSA V
Sbjct: 1279 AFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHMYEYCDNLTPGELTDLRSALV 1338
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE 718
NN A +V+ GLHK +L S +L K I V+ E
Sbjct: 1339 NNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVERQE 1375
>gi|346318518|gb|EGX88121.1| RNase3 domain protein [Cordyceps militaris CM01]
Length = 1455
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 201/893 (22%), Positives = 357/893 (39%), Gaps = 134/893 (15%)
Query: 20 MQNSDYLLMLKRYFK---------PTPKFDINKEMGI---CTLYLPNNCPIQTVIAQGNI 67
+ N + +++L R+ P P++ ++ +G C + LP++ P ++
Sbjct: 575 LSNQNSMVVLARFVSTLGQGTEKSPAPEYVVSG-VGTNFTCWVILPDSAPFKSTSGSMER 633
Query: 68 KTLKQ--TACLEACKKLHQIGALTDNLLPDV---VVEEHDAQKHGNEPYDAEHPIYFPPE 122
+K A EAC +L +G++ NL P + + +A+ + ++ + P+
Sbjct: 634 SKIKARCAAAYEACTRLIDLGSINKNLQPTFRKKLPKMRNARLALRDKKQKQYDMVIKPK 693
Query: 123 LVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT 182
+ P + I++ + + L R +L +I+ + + +D ++
Sbjct: 694 VWTSLPAEIPTQLFQTFIQVHPD---SAGITTMTLLTREKL-PDIEPIRLFVTIDL-TMS 748
Query: 183 VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLPA 242
L G ++++ ++V F + LF + D E EI + L PA
Sbjct: 749 ATLVPGGVVEVSAEQVQQLAAFTLCLFGQVFSKQFDARAE-----------EIPFYLAPA 797
Query: 243 SEQSIDWEPVASLSFP--CDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHS 300
S SL P C + + ++ + +S R + K M+ V PH
Sbjct: 798 S---------VSLHGPEKCAVDWRRVEH-TVLSKKRDPEVKPQD----MMRQQFVVDPHD 843
Query: 301 G-QIYYITGVLGHLNA------------NSLFTRNDGGAITYKKHYEERYGIQLCFDQE- 346
G + ++I ++ L A N + +D + Y ++ + ++ FD E
Sbjct: 844 GSRKFFIYEIVPTLRATDPAPAGIPDHKNPGYQLSDKSIMQYSCSTKQPHRQKIVFDTEQ 903
Query: 347 -----LLLNGRRIFHAQNYLSKCRQEKQREPSKISFE------LPPELCRIIMGPMSLST 395
LLL+ RR F + + +++ +P ++ + +P ++ R + S+
Sbjct: 904 PVYRALLLSLRRNFLRSDDVEAAKED---QPCYLTLQCLKISPIPADVARAALLLPSILY 960
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESL 455
F T V + LQ L L + L +L V + ++A Q + E L
Sbjct: 961 FVDCTLV--VGEALQMLGLNIPLPLLLQAFTKNGVDADDEEDVKADEEHGGQRNY--ERL 1016
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
E LGD+FLK + ++ N E V + ++ N L K D L +IR+E F+
Sbjct: 1017 EFLGDTFLKMGTTIAMYTHKTNATEFEHHVDRMLMLCNKNLLKTALDLGLHTYIRSESFN 1076
Query: 516 PKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG 575
+ W L + + + + + KT+ADV EA+IGA +G +
Sbjct: 1077 RRTW-----------YPSLRLVHGKPTKASAIQNLGDKTIADVCEAIIGAAYMSGVPDGN 1125
Query: 576 LIFLDRIGIKV------------DF---VNVPYERQFQVQAERLVNVRHLESLLNYSFRD 620
+ + K+ D+ +VP A V + L+ Y FR
Sbjct: 1126 MDEAVKAVTKMVADPNHTMQCFADYYAGFSVPAWHASSGSASVRAAVDRVAGLIGYRFRS 1185
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
P LL A TH SY EIP YQ LEFLGDA+LD I +L+ +P P LT+ +
Sbjct: 1186 PLLLRSAFTHPSYKAEEIPD-YQTLEFLGDALLDMAIVDHLFRAHPDAGPQWLTEHKMGV 1244
Query: 681 VNNDCYALSSVKHGLHKHILHAS-------QELYKWINITVDSFERLSLE-----STFGW 728
+N V GL + +L A + + + D+ E + + S W
Sbjct: 1245 CSNQFLGYLCVSLGLQREVLAADAAVPGQIRSFEERLAYLKDAAETAAAQQGRPVSKGYW 1304
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVV---FES-IRPLLEPMITPETMRL----- 779
T PK L D++E+L GA+FVD+ + VV FE+ +RP ++ M + +
Sbjct: 1305 TLATRPPKVLADVVEALIGAMFVDARYDYAVVQRFFEAFVRPHIDDMDGYDALGAGHVVT 1364
Query: 780 QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFK---HTHADA 828
Q A L Y C++ F M + G A+T + + H HA A
Sbjct: 1365 QAAHALQGYGCRRWRFCMAEVPCESRTGLLAITASDYVCALVIHSKVHWHAKA 1417
>gi|345571082|gb|EGX53897.1| hypothetical protein AOL_s00004g556 [Arthrobotrys oligospora ATCC
24927]
Length = 1587
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 189/777 (24%), Positives = 315/777 (40%), Gaps = 89/777 (11%)
Query: 48 CTLYLPNNCPIQTVIAQG--NIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQK 105
C + +P PI++V+ + K+ A EACKKLH L D L+P
Sbjct: 730 CEVKMPEISPIRSVLGDTARSKGAAKRHAAFEACKKLHHGKYLDDYLMPIYTKRLRPMMA 789
Query: 106 HGNEPYDAEHPIYFPPELV------NQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAV 159
+ + D+ +P ++ + P T++ C + L+ + P+ I LA
Sbjct: 790 NAHLAVDSHKLSSYPSQIKPSFWDRKEPPVPTRLWATC--LTLRHPNQLEKPSQGICLAT 847
Query: 160 RTELESEIKKVNFDLEVDRG--RLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNL 217
R + K +F L DRG L + I +K+ F F I +
Sbjct: 848 R---DKPPKFPSFTLYFDRGGQSLVDCVTMDDPIICDENKIKQFNEFTSRFFIDIFNKEF 904
Query: 218 DKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNAR- 276
D E L L L + + IDWE V ++ + +
Sbjct: 905 DIQTEKLPYWVLPIKLNKTVTSASSIDDMIDWELVMNVFKNPEENFDLATTPPEFYFGKF 964
Query: 277 VVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEER 336
V+ + G ++ + P Y G NA + D KK ++
Sbjct: 965 VIDRRQGSRRFYILDHEPKYHP------YDPIPEGASNAPHTVSIIDYSYSAGKKGWQRW 1018
Query: 337 YGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTF 396
G L DQ +L+ R+ H N+L + E+++ + +++ +P R+ P T
Sbjct: 1019 VG-DLPPDQPVLI-ADRVLHRLNFLERP-TEREKTQNTMAYVVPSPF-RVSPLPAKFCTM 1074
Query: 397 YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFH----- 451
P+I+ R+ + L A ++ + V I LEAIT H
Sbjct: 1075 G--LLFPAIITRIDAYLQAYDVCKLF------KVQIDLELALEAITKDSDNTQEHDEEPQ 1126
Query: 452 ---------LESLETLG----DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
E LE LG + FLK + L+ T + E V++ ++ N +L +
Sbjct: 1127 NKRRGMVTNYERLEFLGGELNNCFLKLGTTIALYSTNPDQDEFAYHVERMVLVCNRSLYE 1186
Query: 499 LGCDHKLPGFIRTEPFDPKMW-----MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
+ +L +I++E F ++W +I G G E ++R ++ K
Sbjct: 1187 RAVELELYKYIQSEGFSRRLWYPMITLIKGKAVGKTE-------SQRT------HRLSDK 1233
Query: 554 TVADVVEALIGAFLSTGGENVGLIF--------LDRIGIKVDFVNVPYERQFQ---VQAE 602
++ADV EALIGA L GG ++ + ++ D+ ++ ++Q V A
Sbjct: 1234 SMADVCEALIGASLCGGGLDMAARMVTTLVNKSIHKVNSFKDYYSLYTLPEYQIGPVNAS 1293
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVY 660
+ +E + Y F+ P LL A TH S+ M +IP CY+RLEFLGDA++D
Sbjct: 1294 QQELADKIERDMGYKFKYPRLLRSAFTHPSFPTMWEKIP-CYERLEFLGDALIDMACVED 1352
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI----LHASQELYKWINITVDS 716
L+ ++P P LT+ + + +NN SVK H H+ H + + +++ + ++
Sbjct: 1353 LWERFPGKDPQWLTEHKMSMINNRFQGALSVKLKFHTHLRAMGAHINSAVQEYVQL-IEE 1411
Query: 717 FERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT 773
S +S W PK L DI+E+ GAIFVDSG N +VV R + P T
Sbjct: 1412 ARIASNDSVDYWIDAKQPPKVLPDILEAYVGAIFVDSGFNYDVVTSFFRTHVRPFFT 1468
>gi|315044595|ref|XP_003171673.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
gi|311344016|gb|EFR03219.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
Length = 1518
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 185/413 (44%), Gaps = 65/413 (15%)
Query: 399 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKVLEAITTK------------K 445
F F P+++ R++S L+A L+ C + + IP LEA+T K
Sbjct: 1012 FVF-PAMIWRMESYLIA-------LEACEKLQLKIPPELALEALTKDSENTEDYGMEQIK 1063
Query: 446 CQEGF--HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDH 503
Q G + E LE LGD FLK A S LF ++ E VK+ +I N L
Sbjct: 1064 FQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIIL 1123
Query: 504 KLPGFIRTEPFDPKMWMIPG-------DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
++ FIR+ F + W G D +H+L + KT+A
Sbjct: 1124 EIFKFIRSRSFSRRAWYPEGLTLLKGKDKKEGPNGPEHALAD--------------KTIA 1169
Query: 557 DVVEALIGAFLSTGGEN--------VGLIFLD----RIGIKVDF---VNVPYERQFQVQA 601
DV EALIGA L GG + +F++ R+ D+ ++P + A
Sbjct: 1170 DVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYSKLYSLPSYQTAVASA 1229
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITV 659
+ ++S L Y FR P LL A H SY +P CYQRLEFLGD++LD +
Sbjct: 1230 SEIDVANQIKSKLGYCFRYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVN 1288
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE- 718
+L+ +YP P LT+ + A V+N +V LH H++H S L I + +
Sbjct: 1289 HLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQA 1348
Query: 719 -RLSLESTF-GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
++ +E W PK L DI+E+ GA+FVDS N +VV + R ++
Sbjct: 1349 MKIKMEGNLEAWTYTNEPPKCLPDIVEAYLGAMFVDSNFNFDVVDDFFRKFIQ 1401
>gi|242078881|ref|XP_002444209.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
gi|241940559|gb|EES13704.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
Length = 291
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 133/248 (53%), Gaps = 8/248 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 664
+V +E++L Y F D SL+ ALTHGS+ P P Y+RLE+LGD VL L++ ++
Sbjct: 26 DVAAIEAVLGYEFADKSLVELALTHGSFYFPYRPGDTYERLEYLGDGVLTCLMSREVFRN 85
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
Y TL PG LT +R+A+V+ + A +V GLH+ + H + +L I + ++ + + S
Sbjct: 86 YRTLPPGPLTRLRAANVDTEKLARVAVDRGLHRFLRHKAPKLQDQICLFIEEMRKYPVHS 145
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
+ PK L DI+ESL GAI+ DS N+E V+ R L +P+I ET+ P E
Sbjct: 146 NGLLDP----PKVLCDIVESLIGAIYWDSDFNQEEVWRVFRTLADPLIGLETLGKHPVTE 201
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L E+CQK +K + ++ VEV +G L KE A+ A+K L
Sbjct: 202 LFEFCQKTRRGVKFV---KDEWDKSLKVEVLIDGELVASATYGPKKEIAQNRAAKAALDK 258
Query: 845 LKASFPGT 852
LK + T
Sbjct: 259 LKETLGQT 266
>gi|403171947|ref|XP_003331125.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169644|gb|EFP86706.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1453
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 239/531 (45%), Gaps = 80/531 (15%)
Query: 355 FHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLL 414
FH N LSK + +P +I LP +LC+ P S+ + F+++PS+ L L
Sbjct: 873 FHVLNNLSKS-ESTVVQPHRIL--LPLKLCKGTHIPRSM--WKVFSYLPSLTRLLHDTLQ 927
Query: 415 AVNLKNMLLDHCMQNVTIPTSKVL---EAITTKKCQEGFHLESLETLGDSFLKYAASQQL 471
A L + + PT +L +A+T + ++LETLGD+FLK A S +
Sbjct: 928 ATAL--------FKRLDFPTISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSVHV 979
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL 531
+ ++ EG +S + R + NA L + LP I ++ P G +
Sbjct: 980 YLSHLKKGEGDMSHVRSRSVDNAYLRRKAIQANLPASILSQ--HPSTRRRQGAPQREFS- 1036
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-- 589
+K+ + ++DVVEAL+GA TGG +GL +IG +D
Sbjct: 1037 ----------------RKIPKRVLSDVVEALLGAGFLTGGIELGL----KIGTALDLCFG 1076
Query: 590 -NVPY-ERQFQVQAER----------LVNVRHLESLLNYSFRDPSLLVEALTH---GSYM 634
P+ ER + E L+ + LE + Y F++ LLV+ALTH S+M
Sbjct: 1077 GTTPWSERPVNIGLESITHDALEPSILLKCQALEKKIGYVFKEKLLLVQALTHRSANSFM 1136
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH- 693
CY+R E+LGDAV+D I + Y ++ + +LT R+ V+N ++K
Sbjct: 1137 T----NCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFLALKKL 1192
Query: 694 GLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF-----PKALGDIIESLSGA 748
GL + I+HAS+ + +++ + + + + F PK L D++E++ GA
Sbjct: 1193 GLQEIIMHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFDPPKILNDVLEAIVGA 1252
Query: 749 IFVDSGCN-------KEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVA 801
+F+DSG N +++FE + P L ++ + + R ++Y + T+
Sbjct: 1253 VFIDSGFNLHTAYRTLDIIFEDVIPGLSRLVARDPLSTM-LRLRDQYQCAELRRISTTIR 1311
Query: 802 ---PRINGKAAVTVEV---HANGTLFKHTHADADKETAKKVASKEVLKSLK 846
P GK ++V+V +G + A++ AS E LK L+
Sbjct: 1312 EPNPNEEGKDPISVKVCRIELHGQEIASGRHKSSASVAEQRASLEALKVLQ 1362
>gi|296089027|emb|CBI38730.3| unnamed protein product [Vitis vinifera]
Length = 1474
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 131/248 (52%), Gaps = 23/248 (9%)
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFD 344
+ +V HSG+ +Y+ V + A + F R +G G + +Y +Y ++YG++L +
Sbjct: 1219 LVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYADYYRQKYGVELIYK 1278
Query: 345 QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE---------LPPELCRIIMGPMSLST 395
Q+ L+ GR + + +N LS R E S E LPPELC + P+ S
Sbjct: 1279 QQPLIRGRGVSYCKNLLSP-RFEHSEAHEGESDETLDKTYYVFLPPELC--FVHPLPGSL 1335
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESL 455
S +PSIM R++S+LLAV LK+++ N +P +K+LEA+T CQE F E
Sbjct: 1336 VRSAQRLPSIMRRVESMLLAVQLKDVI------NYPVPAAKILEALTAASCQETFCYERA 1389
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ + F
Sbjct: 1390 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQADRFA 1449
Query: 516 PKMWMIPG 523
P W PG
Sbjct: 1450 PSRWAAPG 1457
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
+++R+ KP + + C L LP N P + + +++ +Q CL ACKKLH+
Sbjct: 871 FIMERHEKPGGPTEYS-----CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHE 925
Query: 85 IGALTDNLLPDVVVEEHDAQKHGNE-----PYDAEHPIYFPPELVNQCPQD--------- 130
+GA TD LLPD E + N+ P A H ++P + N +
Sbjct: 926 MGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYPEGVANVLQGEWILLGKDGC 985
Query: 131 -TKITYHCYLIELK-QNFN-----YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT- 182
+ H Y+ +K NF + D V+ EL++E+ ++ DL + R +T
Sbjct: 986 NSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELDAEVLSISMDLFIARTMVTK 1045
Query: 183 VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G I +T ++ + F + L +++D +++
Sbjct: 1046 ASLVFWGPIDITESQLASLKSFHVRLMSIVLDVDVE 1081
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 600 QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 659
+ E ++ L+ ++NY +L EALT S + CY+R E LGDA L ++++
Sbjct: 1348 RVESMLLAVQLKDVINYPVPAAKIL-EALTAASC---QETFCYERAELLGDAYLKWVVSR 1403
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI 699
+L+ KYP G LT MR V+N S++ GL +I
Sbjct: 1404 FLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYI 1443
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 756 FDLAKTVLAYIQSRGRARKPGSDYILMVER 785
>gi|403171941|ref|XP_003331118.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169641|gb|EFP86699.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 193/771 (25%), Positives = 323/771 (41%), Gaps = 109/771 (14%)
Query: 52 LPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDNLLP---DVVVEEHDAQKHGN 108
LP + T + G K++A EACK L ++G L ++ LP D V + DA
Sbjct: 585 LPPSRRTFTGLEMGTKNGAKRSAAFEACKVLRELGVLNEHFLPQREDKVAQVRDADGREI 644
Query: 109 EPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPA----HDIVLAVRTELE 164
E + +++ D + + +L +L +F D PA ++ A +
Sbjct: 645 ETTQLADKV---EAIISNVYGDFRTSSEVWLHKL--SFPDDTPAGFSTMGLLCARHLTIP 699
Query: 165 SEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLL----CRRFQIALFRVIMDHN--LD 218
+++ + D V R L+V +KH K++ D RF + + +V ++
Sbjct: 700 DDLQLFDHD-PVSRP-LSVKIKHSKKVEWEKDAAPFNLQRLERFTLLVMQVAVNRKPYEG 757
Query: 219 KLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVV 278
KL ++ L L D +EID+ L+ + E S + C I S R+
Sbjct: 758 KLYFLVAPL-LNDAIEIDWNLVDTPMIPLS-EAADSSRYQCTI------VPSRRPRFRIF 809
Query: 279 QT--KSGPLCTCMIYNSVVCTP---HSGQIYYITGVLGHLNAN--SLFTRNDGGAITYKK 331
T +G LC + V P H + LGH L + G Y +
Sbjct: 810 DTCESAGDLCAASPPSRVPACPSMQHFCKKIAKFHNLGHFYKTCYDLEDEHLKGGFVYLQ 869
Query: 332 HYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPM 391
+ Y LL + + H L LP +LC+ P
Sbjct: 870 TTFQVYN-------NLLQSESTLAHPYRTL-----------------LPLKLCQGTHIPR 905
Query: 392 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFH 451
++ + F+++PS+ L + A L M LD M +P + ++A+T +
Sbjct: 906 TI--WKVFSYLPSLTRLLHDSIQATAL-FMRLDFPM--TLLP--RGIQALTPPGVGVPWD 958
Query: 452 LESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRT 511
++LET+GD+FLK A S ++ ++ EG +S + + + N L + LP I
Sbjct: 959 YQTLETVGDAFLKLATSVHVYLSHLRKGEGDMSHVRSKSVDNDYLRRKAIQANLPSSILG 1018
Query: 512 EPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG 571
+ F + G EL + + + V + ++DVVEAL+GA TGG
Sbjct: 1019 QRFRTDRFRDAQTEDGK-ELPNGNF----------SRNVPRRVLSDVVEALLGAGFLTGG 1067
Query: 572 ENVGLIFLDRIGIKVDFV---NVPY-ERQFQVQAER----------LVNVRHLESLLNYS 617
+GL +IG +D P+ ER + E L+ + LE + Y
Sbjct: 1068 IELGL----KIGTALDLCFGGTTPWNERTLNIAFEGTAHDKLASPILLKCQALEEKIGYV 1123
Query: 618 FRDPSLLVEALTH---GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
F++ LLV+ALTH S+M CY+R E+LGDAV+D I + Y ++ + +LT
Sbjct: 1124 FKEKLLLVQALTHRSANSFMT----NCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELT 1179
Query: 675 DMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLESTFGWESETS 733
R+ V+N ++K GLHK I+H S+ + + + E + F E
Sbjct: 1180 LARAKLVSNGSLGFLAIKKLGLHKMIMHKSESFEQACVEAIKAIEPFTSIEEFFSNLENL 1239
Query: 734 F-----PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
F PK L D++E++ GA+F+DS + V+ +I + E +TP R+
Sbjct: 1240 FVVFDPPKILNDVLEAIVGAVFIDSRFDLPTVYRTIDKIFED-VTPGLSRI 1289
>gi|449543396|gb|EMD34372.1| hypothetical protein CERSUDRAFT_55073 [Ceriporiopsis subvermispora B]
Length = 1702
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 199/421 (47%), Gaps = 29/421 (6%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P +CR+ +S F +F +P + HRL + A + L I +++
Sbjct: 908 PQRMCRV--AHLSEDIFRTFHVLPELCHRLTDVWRARTARAEL-----GLPPIADDLMVQ 960
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
A+T GF+ + LETLGD+ LK A+ LF Y + HEG L + + + N L
Sbjct: 961 ALTLPAAAAGFNNQLLETLGDAVLKLGAAVHLFNKYPHRHEGQLDMLRRTCVCNRTLLAR 1020
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
G +H L ++ +E + W Y + ++ + Y + +++ D +
Sbjct: 1021 GLEHGLEQYLTSETQHIRAW--------RYIAPEGHDPSDPRPYRHAARSFPRRSIQDCM 1072
Query: 560 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF--QVQAERLVNV-RHLESLLNY 616
EA +GA +TGG + L +G+ +P+ ++ ++ A+ + L+ +L +
Sbjct: 1073 EATLGAAFATGGIQMALRAGTALGLSFGG-PLPWTARYGGRLPAKDASPLFTELQEVLGH 1131
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F+ LL+EA+TH S+ E YQRLEFLGDA++D ++ YLY KYP + G L+
Sbjct: 1132 QFKHGQLLLEAVTHPSFGSYET-TSYQRLEFLGDALIDLVVMRYLYFKYPRATSGQLSWA 1190
Query: 677 RSASVNNDCYALSSVK-HGLHKHILHASQELYKWINITVDSFERLSLESTF--GWESETS 733
RS +V A +V LHK +L + L I V + +S GW+ +
Sbjct: 1191 RSRAVCASALAWVAVNCLELHKMMLVNNVGLSVAIGKYVPILKEISNIDIINNGWKQDP- 1249
Query: 734 FPKALGDIIESLSGAIFVDSGCNKE---VVFESIRPLLEPMITPETMRLQPARELNEYCQ 790
PKA+ D++ES+ GA+ VD G + E V E L ++TP+ R P EL +
Sbjct: 1250 -PKAISDVLESVLGAVLVDCGYDFEKAAAVVELTMADLLAVLTPDLPR-DPISELMVWAA 1307
Query: 791 K 791
+
Sbjct: 1308 Q 1308
>gi|342872111|gb|EGU74508.1| hypothetical protein FOXB_14953 [Fusarium oxysporum Fo5176]
Length = 1500
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 192/443 (43%), Gaps = 69/443 (15%)
Query: 384 CRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV 437
C II+ P+ +S + F P+I+HR+ S+L+ ++ N+L ++ IP
Sbjct: 964 CFIILEPLHVSPLPIDVVSMAMAF-PAIIHRIDSVLIVLDACNLL------DLEIPPELA 1016
Query: 438 LEAITTKKCQEGFH--------------LESLETLGDSFLKYAASQQLFKTYQNHHEGLL 483
LEA+T G H E LE LGD FLK A + ++ + +E
Sbjct: 1017 LEAMTKDSDNSGEHDTEQINFQTGMGDNYERLEFLGDCFLKMATTISIYTLMPDGNECKY 1076
Query: 484 SVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIY 543
V++ +I N L D KL F+R++ FD + W D L +
Sbjct: 1077 HVERMLLICNQNLFNHAVDRKLQEFVRSKAFDRRTW-----------YPDLPLKKGKAPK 1125
Query: 544 VTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLD----------RIGIKVDFVN-- 590
+ + + KT+ADV EALIGA +L++ N+ L R+ D+
Sbjct: 1126 TSMKHNLADKTIADVCEALIGAAYLTSKASNMDLAVKAVTRMTKSKNHRMKAFKDYYKAY 1185
Query: 591 -VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
VP ++ A + V+ + Y F+ L+ A H S+ +P YQRLEFLG
Sbjct: 1186 KVPEWQEGNASASQRSLVQKVAQATGYRFKSAQLVQSAFKHPSWPYESVPD-YQRLEFLG 1244
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
D++LD I YLY +P P LT+ + A V+N VK GLH+H+L ++ L
Sbjct: 1245 DSLLDMAIVDYLYQNFPRADPQWLTEHKMAMVSNQFLECLCVKLGLHQHLLSSTSSLLSQ 1304
Query: 710 INITVDSFERLS-------------LESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
I V E + F W S PK D+IE+L GA+FVDS
Sbjct: 1305 IRDYVVELEVAEENAHKEAKEVGTPMRKDF-WLKVGSAPKVYADVIEALVGAMFVDSKYK 1363
Query: 757 KEVVFESIRPLLEPMITPETMRL 779
VV ++P + MRL
Sbjct: 1364 FSVVENFFTKFIQPYF--QDMRL 1384
>gi|380025724|ref|XP_003696618.1| PREDICTED: endoribonuclease Dcr-1-like [Apis florea]
Length = 1966
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 166/362 (45%), Gaps = 74/362 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------------DFV--NVP 592
+ K++AD VEALIGA+L G L+F+ +GI V D + + P
Sbjct: 1591 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEISIIQETEPKDRIPGSTP 1650
Query: 593 YER--------------------------QFQVQAER-----LVNVRHLESLLNYSFRDP 621
Y + ++ V E L LE + Y F D
Sbjct: 1651 YVKGKNEKGQTIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKNIGYKFHDI 1710
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1711 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALV 1770
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE---------- 731
NN +A +V+ G HK+ H S L +I ++ F R+ E+ E
Sbjct: 1771 NNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSISEEYYLIGEEECE 1826
Query: 732 ----TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAREL 785
PKALGD+ ESL+GAI++DSG + + V+ +++ I + + P REL
Sbjct: 1827 EAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKNEIEQFSTNVPKSPIREL 1886
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V G+ FK + AK A+K LK
Sbjct: 1887 LELEPETAKFGKPEKLAD--GRRVRVTVDVFGKGS-FKGIGRNY--RIAKCTAAKCALKK 1941
Query: 845 LK 846
+K
Sbjct: 1942 IK 1943
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
P + S L + + + L +H + ++ +L+A+T +G +LE LET+GDS
Sbjct: 1390 TPKFTYHFDSNLFSFDFQPKLENHPGPSPSL----ILQALTMSNANDGINLERLETIGDS 1445
Query: 462 FLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP-KMWM 520
FLKYA + L+ TY N HEG LS + + +SN L +LG L + F+P W+
Sbjct: 1446 FLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWL 1505
Query: 521 IP 522
P
Sbjct: 1506 PP 1507
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 178/455 (39%), Gaps = 98/455 (21%)
Query: 36 TPKFDI------NKEMGICTLYLPNNCPIQTVIAQ---GNIKTLKQTACLEACKKLHQIG 86
TP++ I N M IC+L LP N P++ +++ N ++ A L+ C LH+
Sbjct: 643 TPEWSIQEMNIDNILMYICSLRLPINSPVKYIVSSYPMPNKAMARRMAALQLCIDLHRKN 702
Query: 87 ALTDNLLPDVVVEEHDAQKHGNEPYDAEHPI----------------------YFP--PE 122
+ DNLLP + E A+ P DAE P Y+ E
Sbjct: 703 EIDDNLLP-IGKENFKAK-----PEDAEVPALPDESKVDFSEARPGTTKRRQYYYKKTAE 756
Query: 123 LVNQCPQDTKITYHCYLIEL--------KQNFNYD--IPAHDIVLAVRTELESEIKKV-N 171
+ C + + Y I L +QN P + + EI K+
Sbjct: 757 ALTDCRPIIGVPSYLYHINLVLSCPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCP 816
Query: 172 FDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRD 231
F + G + V LK L K + ++ Q+ +++ + + + L L D
Sbjct: 817 FPIYTRSGEVHVKLK-LSK------QTIILNEMQVEKIATFLNYTFTNVLRLQQYLMLFD 869
Query: 232 --NLEIDYLLLPA-----SEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGP 284
E Y+++P S+ ++DW + + +KN +T +T+
Sbjct: 870 PNASENSYMIVPVKLDEQSDIAVDWNFLECI----------YKNRNTGPTKIPEETRKNF 919
Query: 285 LCTCMIYNSVVCTP-----HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGI 339
Y+ V P Q +Y+ + +LN S F ND G T++++Y ++Y I
Sbjct: 920 KFDASKYHDAVIMPWYRSQDQPQYFYVAEICTNLNPKSSFPGNDYG--TFEEYYLKKYDI 977
Query: 340 QL-CFDQELL----LNGRRIFHAQNYLSK------CRQEKQREPSKISFE----LPPELC 384
Q+ DQ LL + R F Y+++ E+ + + + E L ELC
Sbjct: 978 QIQNLDQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELC 1037
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK 419
I P S + +P I++R+ +LLLA ++
Sbjct: 1038 AI--HPFPASLWRQAVCLPCILYRINALLLANQIR 1070
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1410 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1466
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1467 LSHLRSKQVSN 1477
>gi|343791208|gb|AEM61141.1| RNase III dicer-like protein [Puccinia striiformis f. sp. tritici]
Length = 1386
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 212/451 (47%), Gaps = 59/451 (13%)
Query: 355 FHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLL 414
FHA N L K + + + LP +LC P +L + F+++PS+ + L
Sbjct: 854 FHASNNLLKSKTTLAQPHRTL---LPLKLCTGTHIPRTL--WKVFSYLPSLTRLVHDSLQ 908
Query: 415 AVNLKNMLLDHCMQNVTIPTSKVL---EAITTKKCQEGFHLESLETLGDSFLKYAASQQL 471
A L + + PT +L +A+T + ++LET+GD+FLK A S +
Sbjct: 909 ATAL--------FEQLNFPTISLLLGMQALTPPGVGVPWDYQTLETVGDTFLKLATSVHV 960
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL 531
+ ++ EG +S + + + NA L + LP FI ++ F + G EL
Sbjct: 961 YLSHLKKGEGDMSHVRSKSVDNAYLRRKAVQANLPSFILSQRFRTDRFRDAQTEDGK-EL 1019
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-- 589
+ S + + + ++DVVEAL+GA TGG +GL ++G +D
Sbjct: 1020 ANGSF----------SRTIPRRVLSDVVEALLGAGFLTGGIELGL----KVGTALDLCFG 1065
Query: 590 -NVPY-ERQFQVQAER----------LVNVRHLESLLNYSFRDPSLLVEALTH---GSYM 634
VP+ +R + E L+ L+ + Y F++ LLV+ALTH S+M
Sbjct: 1066 GTVPWNQRTLNLSFESAALSRLDPSILLKCETLQQKIGYVFKEQLLLVQALTHRSANSFM 1125
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH- 693
CY+R E+LGDAV+D I + + ++ + +LT R+ V+N ++K
Sbjct: 1126 T----NCYEREEWLGDAVIDMWIVEHAFKRFANATAEELTLARARVVSNGSLGFLAIKKL 1181
Query: 694 GLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF-----PKALGDIIESLSGA 748
GL + I+H S+ + +++ E + F + + F PK L D++E++ G+
Sbjct: 1182 GLQEIIMHKSENFDQACREAIEAIEPFTKIEEFFSKMDNLFVVFDPPKILNDVLEAIVGS 1241
Query: 749 IFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
+F+DSG + + V+ ++ + E +I P RL
Sbjct: 1242 VFIDSGFDLQTVYRTLDIIFEDVI-PGMSRL 1271
>gi|158706443|sp|Q0CEI2.2|DCL2_ASPTN RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1377
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 195/426 (45%), Gaps = 60/426 (14%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
P+K +P C I P + + F F+ +I+ RL++ L+A L +L Q+V
Sbjct: 876 PAKARI-IPATACTIDRLPFTDTIFG--LFISAILDRLEATLIATRLCETIL----QDVQ 928
Query: 432 IPTSK-VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
+++ V+ AI+ Q + E GDS LK+ S QL+ + N EG LS +D I
Sbjct: 929 FSSTRHVITAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEI 988
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ N L + D L FI T F P+ W P L +E+ + V G++ +
Sbjct: 989 VQNNRLARAALDVGLDAFILTRRFTPRKWTAP-------------LISEKAVEVAGKRPL 1035
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHL 610
SK +ADVVE+LIGA GG+ + R+ +++ + A ++N L
Sbjct: 1036 SSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEICPI-TPPPVHESAPHVMN-DSL 1093
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ L Y+F + +LLVEALTH S + YQRLEFLGDAVLD ++ + +
Sbjct: 1094 KQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVHAMAHHAVECPQ 1153
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKH-------------ILHASQ---ELYKWI---- 710
G++T ++ A N + A ++ + + L + Q EL++++
Sbjct: 1154 GEMTMIKHALTNANLLAFFCMEFVVAQEHTDVDAVPAAGGFALRSEQKPIELWRFMRSEA 1213
Query: 711 ---------------NITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
+ + L + + W+ S+ + K DI+ES+ GAIFVDS
Sbjct: 1214 LDLNNARETVLHRHSQLRAEIVHALHHGAQYPWQALSQLNADKFFSDIVESILGAIFVDS 1273
Query: 754 GCNKEV 759
+ +V
Sbjct: 1274 RGDLDV 1279
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQR EF GD+VL + ++ LY ++P G L++ R V N+ A +++ GL
Sbjct: 947 PTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAF 1006
Query: 699 ILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKE 758
IL KW T ++E G +S K L D++ESL GA ++D G K
Sbjct: 1007 ILTRRFTPRKW---TAPLISEKAVEVA-GKRPLSS--KVLADVVESLIGAAYMDGGQAK- 1059
Query: 759 VVFESIRPLLEPM----ITPETMRLQPARELNEYCQKH 792
IR LL + ITP + +N+ ++H
Sbjct: 1060 -AHTCIRRLLPEIEICPITPPPVHESAPHVMNDSLKQH 1096
>gi|212537171|ref|XP_002148741.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210068483|gb|EEA22574.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1431
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 207/487 (42%), Gaps = 82/487 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P +C I P + F F+PSI H+++ L +A L +L N+ + VL
Sbjct: 912 PIRICHIDRMPAKFAKFA--LFIPSITHKIEVLFIAERLARTVLSRVGFSNL----AHVL 965
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
AI+ E + E LGDS LK S L HEG+LS KD I+SN L +
Sbjct: 966 TAISASSAHEENDYQRYEFLGDSLLKLITSIHLVVNNPLWHEGMLSAAKDTIVSNGRLYR 1025
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
+ L FI T+ F + W SY ++ E ++++ +KT+ADV
Sbjct: 1026 TALNLGLDRFILTKSFTGRKW------RPSYVSQFETVGEE-------KRELSTKTLADV 1072
Query: 559 VEALIG-AFLSTGGENV----GLIFLDRIGIKV-DFVNVPYERQFQV-QAERLVNVRHLE 611
VE+L+G AFL G E + ++ +R + D V YE QA + +E
Sbjct: 1073 VESLLGAAFLDGGYEKLEACAKIVLPERAWSSIGDDVRTLYEAALDSDQAAMHPKLGQME 1132
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+L Y F PS+L EALTH S + YQRLEFLGD++LD+ + +N LS
Sbjct: 1133 EMLGYKFNKPSILFEALTHPSSN--DGAPTYQRLEFLGDSLLDHFVVQEFFNHPEKLSHQ 1190
Query: 672 DLTDMRSASVN----------------------------------NDCYALSSVKHGLHK 697
++ MR+A VN + Y ++HG
Sbjct: 1191 EMHLMRTAVVNAHFLGFLCQSLYITEQRTEPVSPGKAHLSTISTDHKLYLWQLMRHGASW 1250
Query: 698 HILHASQELY----KWINITVDSFERLSLESTFGWES--ETSFPKALGDIIESLSGAIFV 751
+++A QE W + D+ L+ T+ W + + K D++ES+ GAIFV
Sbjct: 1251 EVMNAQQETKTRYEAWGSAVHDA---LNHSKTYPWAALFRINASKFFSDMVESILGAIFV 1307
Query: 752 DSGCNKEVVFE-----SIRPLLEPMITPETMRLQPARELNEYCQKHHFSM-----KKTVA 801
DS + +V + + P L +I + L P + E + + KK V
Sbjct: 1308 DSRGSMDVSRQFLERIGVLPCLRRIIREKVDCLHPFNHVREAAKSKKVEISSSAEKKAVI 1367
Query: 802 PRINGKA 808
P G A
Sbjct: 1368 PESEGAA 1374
>gi|312376926|gb|EFR23879.1| hypothetical protein AND_11908 [Anopheles darlingi]
Length = 994
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 136/275 (49%), Gaps = 43/275 (15%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y F+D S L++A+TH SY + CYQRLEFLGDA+LDYLIT +LY S
Sbjct: 714 FERSLGYHFQDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHS 773
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY----KWINITVDSFERLSLEST 725
PG LTD+RSA VNN +A +V+HG H++ LH S L +++ I ++ R++ E
Sbjct: 774 PGALTDLRSALVNNTIFAALAVRHGFHRYFLHLSPGLQEVIDRFVRIQQENGHRITEEEY 833
Query: 726 F-------------------------------GWESETSFPKALGDIIESLSGAIFVDSG 754
+ G + PKALGD+ ES++GAIF+DSG
Sbjct: 834 YLPDEDDDMLAADGGFGGGFGEIEGGQALMGSGEAEDVEVPKALGDVFESIAGAIFLDSG 893
Query: 755 CNKEVVFESIRPLLEPMIT--PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVT 811
+ V++ R ++ P I ++ P REL E + F + +A + VT
Sbjct: 894 MSLNTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLAD--GRRVRVT 951
Query: 812 VEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
VEV GT + AK A+K L+ LK
Sbjct: 952 VEVFGKGTF---RGIGRNYRIAKCTAAKCALRQLK 983
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + L+ Y N HEG LS + + +SN L
Sbjct: 380 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSNLNL 439
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIP 522
+LG +L + F+P W+ P
Sbjct: 440 YRLGRRKRLGDCMIAAKFEPHDNWLPP 466
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 396 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 436
>gi|453080784|gb|EMF08834.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1400
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 197/410 (48%), Gaps = 56/410 (13%)
Query: 384 CRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL-EAIT 442
C I + P + F +F VPSI++RL++ LL +L ++ ++++ + ++ EAI+
Sbjct: 878 CTIDVLPAKYALFSAF--VPSILYRLETSLLVRDL----METALKDIALTDHALIKEAIS 931
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
+ E LE LGD LK+ Q+ + + E L++++DRI+ N+ L K +
Sbjct: 932 SPAAGEPTDYNRLEYLGDCVLKHYTELQVMSQHTDWPEAYLTLERDRIVRNSNLAKAALE 991
Query: 503 HKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEAL 562
+L +I TEPF + W P + + D + ++++ +KT+ADVVEAL
Sbjct: 992 RELDKYILTEPFTGRKWRPP---YATEHVKDQA----------AKRQMSTKTLADVVEAL 1038
Query: 563 IGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF-QVQAERLVNVRHLESLLNYSFRDP 621
IGA G + + + + N +E ++ A + NV LE+L+ ++F P
Sbjct: 1039 IGAAYLEGDTEKAFQCIRVLLPQEKWSNDCFETLIAELTACPVANVLLLETLIGHTFSHP 1098
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
+LLVEA THGS + Y+RLEFLGD+VLD +IT L++ L L + +A V
Sbjct: 1099 TLLVEATTHGSCPANKTGMSYERLEFLGDSVLDMIITPKLFSHPRKLKHWQLHSVHAALV 1158
Query: 682 NNDCYALSSVKHGLHKHILHASQ---------------ELYKWI-------NITVDSFER 719
N+ +++ +++ + Q LY+++ NIT + E
Sbjct: 1159 NSHLLGYCCLRYYINQEMFDIVQTTSGNYDSVSARRKTHLYEFMRAGAQVNNITCQAVEH 1218
Query: 720 LSLEST-----------FGWESETSF--PKALGDIIESLSGAIFVDSGCN 756
S+ + W + PK D++ES+ GAIF+D+ N
Sbjct: 1219 FHECSSQIEKALAHGIEYPWVELVTLSPPKFFCDLVESILGAIFIDTHGN 1268
>gi|426204654|gb|AFY13245.1| dicer-2, partial [Schistocerca gregaria]
Length = 357
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 158/351 (45%), Gaps = 71/351 (20%)
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNM------------------- 421
PELC II P+S + +PS++H+L L A L M
Sbjct: 9 PELCDII--PLSAALCLKIHLLPSVLHKLTVLAAAYELCQMVPISKGSVLDYEMPENAGD 66
Query: 422 --LLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHH 479
LL+ + + V +A+T C + F+ E+LETLGDSFLK+A S LF Y++HH
Sbjct: 67 IQLLNSDFGGCGLTLNDVEQALTAASCDDLFNSETLETLGDSFLKFAVSLFLFIHYKSHH 126
Query: 480 EGLLSVKKDRIISN------AALCKLGCDHKLPGFIRTEPFDPKMWMIPGD--------- 524
EG LS K +++SN A +G ++ F+ E + P + +P
Sbjct: 127 EGTLSSIKMKVVSNWHFYNVAKGKDIGSKLQIHRFVPDETWVPPGFTVPQPVRRKFLSEH 186
Query: 525 ---------NSGSYELNDHSLFNERKIY----------VTGRKKVKSKTVADVVEALIGA 565
N E + L + R + G + V K++AD +EAL G
Sbjct: 187 IAPEYLKKLNPSEIEHSMDQLVDMRNTWNLAMPNNSELFIGVQTVSDKSLADALEALTGV 246
Query: 566 FLSTGGENVGLIFLDRIGIKVD-------FVNVPYERQFQVQAER-------LVNVRHLE 611
+L G + + L+ +G+ P ER ++ R L + LE
Sbjct: 247 YLKAYGLSGAIALLNSLGVLPAKKASPHILFERPPERPLLQESLRHQYLDFHLGDTEELE 306
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
LNY F+D L++ALTH S+ I CYQRLEFLGDA+LD+L+T Y+Y
Sbjct: 307 ETLNYRFKDRGFLLQALTHPSWSDNRITDCYQRLEFLGDAILDFLVTSYIY 357
>gi|443893959|dbj|GAC71147.1| dsRNA-specific nuclease Dicer and related ribonucleases [Pseudozyma
antarctica T-34]
Length = 1764
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 176/388 (45%), Gaps = 26/388 (6%)
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEA 440
P R+ P+ S +PSI+ R LLLA + L ++ VLEA
Sbjct: 1239 PRFYRVF--PLRSDVLSSVLALPSILARYDQLLLASQCNDTLFSGALE-----VDLVLEA 1291
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
+ + + G E LE LGD+FLK A+ F T E L + I++N L +
Sbjct: 1292 LASPAARCGLDYERLEFLGDTFLKLVATCHTFTTQLGRTEAELHLANKGILTNVRLLREA 1351
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKK--VKSKTVADV 558
+L + D + SG +L + V + ++ KT+ DV
Sbjct: 1352 RRLQLGRWALFASADFRAKRCTAPMSGWM---GGALLQAGPVEVGPGETDVIREKTLPDV 1408
Query: 559 VEALIGAFLSTGGENVGL-------IFLDRIGIKVDFVNVPYERQFQVQA---ERLVN-- 606
VEALIGA L GG + L + + I DF + E + ER V+
Sbjct: 1409 VEALIGAALLGGGTDAALHVCRVLTLIPESIRRLDDFNTLLQELKLTSVTQGWERRVDRS 1468
Query: 607 -VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ HL+SL + +R P L +EA TH S + +P YQRLEFLGDA LD I Y+++ +
Sbjct: 1469 GLDHLQSLFGHVYRYPHLGLEAFTHPSLLASVLP-SYQRLEFLGDAWLDLYIVRYIFSAH 1527
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P LSPG+LT ++ +N A + GLH+++ S+ L ++ + E +
Sbjct: 1528 PDLSPGELTALKGMLASNSTLAALGHRLGLHRYVASNSEVLVSTLSAYSTAMEGAGEGTA 1587
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDS 753
+ + + PKAL D +E+ +I VDS
Sbjct: 1588 YWHKVDVGVPKALADAVEASFASIVVDS 1615
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 19 RMQNSDYLLMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACL 76
RMQ +D L TP F CTL LP+ +++V + + K K+ A L
Sbjct: 885 RMQCTDVL-------GGTPAFS-------CTLELPSTAAVRSVDSGPCSSKKRAKRMAAL 930
Query: 77 EACKKLHQIGALTDNLLPDVV---VEEHDAQKHGNEPYDAE-----HPIYFP 120
AC++L Q+G L + L+P +V V + DA P+ E PI+ P
Sbjct: 931 RACQQLRQLGELDEWLMPKLVGATVADRDAAPVAMNPHHKEWRGTGQPIHVP 982
>gi|170591572|ref|XP_001900544.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158592156|gb|EDP30758.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 1856
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 166/337 (49%), Gaps = 42/337 (12%)
Query: 547 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------------DFVNV 591
++ + K++AD VE+LIGA L G L F+ +G+KV D +
Sbjct: 1514 QQSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTZPVQMEPPLLRFIDTTDQ 1573
Query: 592 PYERQFQVQAERLVNVR--HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
P ++ + + + + LE + Y F D + L++A TH SY I CYQRLEFLG
Sbjct: 1574 P-DKSLRKLNDLWIQFQFSKLEDCIGYRFHDRAYLLQAFTHASYYKNRITGCYQRLEFLG 1632
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
DAVLDY+IT +L+ SPG LTD+RSA VNN +A +VK+ HKH + L+
Sbjct: 1633 DAVLDYVITRFLFQHSAHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRLHHM 1692
Query: 710 I----------NITVDSF-ERLSLEST-----FGWESETSFPKALGDIIESLSGAIFVDS 753
I N++ +F E + + +T G E + PKA+GDI ES++GAI++DS
Sbjct: 1693 IEKFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDS 1752
Query: 754 GCNKEVVFESIRPLLEPMITP--ETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAV 810
G + V+ L++ I P REL E ++ FS + + GK V
Sbjct: 1753 GRSLNTVWRVFYNLMKETINECCSNPPRSPIRELLEMEPERARFSKLERILE--TGKVRV 1810
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
TV++ + T AK A+K L+ L++
Sbjct: 1811 TVDIQGKC---RFTGMGRSYRIAKCTAAKRALRYLRS 1844
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G +LE LET+GDSFLKYA + LF T HEG LS + + +SN L
Sbjct: 1340 LLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEVSNCNL 1399
Query: 497 CKLGCDHKLPGFIRTEPFDPK-MWMIP 522
+LG H LP I FDP W+ P
Sbjct: 1400 YRLGRKHNLPSLIIGSKFDPNDGWLPP 1426
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 199/496 (40%), Gaps = 80/496 (16%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKRYFKPTPKFDI----------NKEMGICTLY 51
FD +++QS+GRAR + Y L+++ + D+ ++ M L
Sbjct: 475 FDRPTDYRAYVQSKGRARKDGASYFLLVEERDREQCSCDLKDFLQIERIGDRVMYRAELL 534
Query: 52 LPNNCPIQTVIAQGN---IKTLKQTA-CLEACKKLHQIGALTDNLLP---DVVV-----E 99
LP N PI+ I K L Q A LEAC++LH+ L D LLP D ++ E
Sbjct: 535 LPINSPIKETIKLKKPLESKKLAQMAVALEACRRLHKRKELNDYLLPVGKDTIMLTALDE 594
Query: 100 EHD------AQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPA- 152
+ D + K G+ + L N P+ + CY+ ++ + +
Sbjct: 595 DPDEFIPNMSYKVGSARRRQLYDKRMAKALHNAIPRAGE---ECYIYVMEMDLIKAVTGA 651
Query: 153 -----HDIVLAVRTEL------ESEIKKV-NFDLEVDRGRLTVNLKHLGKIQLTPDKVLL 200
I+ + TE +I KV +F L + +GR+ N+ L K +L D +L
Sbjct: 652 ANPKNRRIINPLDTEFCFGFLSNKKIPKVPSFPLFLRQGRMQANI-FLVKSRLLVDTQML 710
Query: 201 CRRFQIALFRVIMDHNLDKLNEILKG--LWLRDNLEIDYLLLPASEQSIDWEPVASLSFP 258
L + + D + ++KG +++ D ++ L++P + + + F
Sbjct: 711 ------ELLKAFHHYLFDNVLRLVKGGLVFVPDKAPVNVLIVPLRRERN--SETSEVDFK 762
Query: 259 CDIGLKHHKNCSTMSNARVVQTKSGPLC---TCMIYNSVVCTP-----HSGQIYYITGVL 310
D + S++ + T++ L + + P YY+ +
Sbjct: 763 LDYAYVRNV-VSSIDELPRIPTEAERLAFKFDAAKFQDAIVMPWYRDRDHPSFYYVAEI- 820
Query: 311 GHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYL--------- 361
++A D +T+ ++ ++Y I + Q+ LL+ N L
Sbjct: 821 --IDAKPSSKFPDDKFVTFNDYFIQKYNIIIYDQQQPLLDVDYTSSRLNLLMPRHWSRSK 878
Query: 362 SKCRQEKQREPSKISFE--LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK 419
S+ +EK E IS L PEL + P++ S + +P++++R+ SLLLA L+
Sbjct: 879 SRVTEEKSSESGGISQGQILVPELVDV--HPIAASLWNVIAALPTLLYRINSLLLADELR 936
Query: 420 NMLLDHCMQNVTIPTS 435
+++ N TS
Sbjct: 937 ELVMREAFSNPNYNTS 952
>gi|402595090|gb|EJW89016.1| type III restriction enzyme [Wuchereria bancrofti]
Length = 1410
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 166/336 (49%), Gaps = 40/336 (11%)
Query: 547 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF--------- 597
++ + K++AD VE+LIGA L G L F+ +G+KV V E+
Sbjct: 1068 QQSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTEPVQMEQPLLRFIDTTDQ 1127
Query: 598 QVQAERLVN-------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
++ R +N LE + Y F D + L++A TH SY I CYQRLEFLGD
Sbjct: 1128 PDKSLRKLNDLWIQFQFSKLEDCIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGD 1187
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVLDY+IT +L+ SPG LTD+RSA VNN +A +VK+ HKH + L+ I
Sbjct: 1188 AVLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRLHHMI 1247
Query: 711 ----------NITVDSF-ERLSLEST-----FGWESETSFPKALGDIIESLSGAIFVDSG 754
N++ +F E + + +T G E + PKA+GDI ES++GAI++DSG
Sbjct: 1248 EKFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSG 1307
Query: 755 CNKEVVFESIRPLLEPMITP--ETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVT 811
+ +V+ L++ I P REL E ++ FS + + GK VT
Sbjct: 1308 RSLNIVWRVFYNLMKETIDECCSNPPRSPIRELLEMEPERARFSKLERILE--TGKVRVT 1365
Query: 812 VEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
V++ + T AK A+K L+ L++
Sbjct: 1366 VDIQGKC---RFTGMGRSYRIAKCTAAKRALRYLRS 1398
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +G LE LET+GDSFLKYA + LF T HEG LS + + +SN L
Sbjct: 894 LLQALTLSNASDGISLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEVSNCNL 953
Query: 497 CKLGCDHKLPGFIRTEPFDPK-MWMIP 522
+LG H LP I FDP W+ P
Sbjct: 954 YRLGRKHNLPSLIIGSKFDPNDGWLPP 980
>gi|315139559|gb|ADT80932.1| dicer-like protein [Nicotiana attenuata]
Length = 111
Score = 137 bits (345), Expect = 3e-29, Method: Composition-based stats.
Identities = 65/110 (59%), Positives = 81/110 (73%)
Query: 519 WMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 578
W+IPGDNS ++ L K+Y GR+K+KSK VADVVEALIGAFLS+GGE L F
Sbjct: 2 WLIPGDNSQVQNFDEELLMPSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSF 61
Query: 579 LDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEAL 628
+ +G+ +DFV+ P R F + AE+LVNVR+LESLL+Y F DPSLLVEAL
Sbjct: 62 MKWLGVDIDFVDAPTPRHFPMNAEKLVNVRYLESLLDYKFHDPSLLVEAL 111
>gi|226528435|ref|NP_001141713.1| uncharacterized protein LOC100273842 [Zea mays]
gi|194705648|gb|ACF86908.1| unknown [Zea mays]
gi|414870636|tpg|DAA49193.1| TPA: endoribonuclease Dicer [Zea mays]
Length = 329
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 133/242 (54%), Gaps = 8/242 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 664
+V +E+LL Y F D SL+ ALTHGS+ P P Y+RLE+LGD VL L++ ++
Sbjct: 47 DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMSREVFRT 106
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
Y TL PG LT +R+A+V+ + A +V GLH+ + H + +L I ++ + + S
Sbjct: 107 YRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLRHKAPKLQDQICFFIEEMRKYPVHS 166
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
+ PK L DI+ESL GAI++DS ++E V+ R L +P+I ET+ P E
Sbjct: 167 NGLLDP----PKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADPLIGLETLGKHPVSE 222
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L E+CQK H +K + ++ V+V +G + KE A+ A+K+ L
Sbjct: 223 LFEFCQKTHRGVKFL---KDEWDKSLKVQVLIDGEVVGSAIYGPKKEIAQNRAAKDALDK 279
Query: 845 LK 846
LK
Sbjct: 280 LK 281
>gi|160285502|pdb|2EB1|A Chain A, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285503|pdb|2EB1|B Chain B, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285504|pdb|2EB1|C Chain C, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
Length = 200
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 105/179 (58%), Gaps = 19/179 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 10 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 69
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 70 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 125
Query: 727 GWESE-------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
G +SE PKA+GDI ESL+GAI++DSG + E V++ P++ P+I
Sbjct: 126 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLI 184
>gi|346970337|gb|EGY13789.1| RNase3 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 1563
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 200/448 (44%), Gaps = 84/448 (18%)
Query: 383 LCRIIMGPMSLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIP 433
+C +I+ P+ +ST Y+F P+I+HR++S ++A LD C M N+ +
Sbjct: 1030 VCYVILQPLQISTLPVEVVAMAYNF---PAIIHRIESNMIA-------LDACRMLNLRVR 1079
Query: 434 TSKVLEAITTKKC------QE--------GFHLESLETLGDSFLKYAASQQLFKTYQNHH 479
LEA+T QE G + E LE LGD FLK A + LF + +
Sbjct: 1080 PDLALEAMTKDSSNSEEHDQEKIDFQAGMGNNYERLEFLGDCFLKMATTIALFTRIPDSN 1139
Query: 480 EGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG--DNSGSYE--LNDHS 535
E V++ +I N L + L +IR++ FD + W G +G + N HS
Sbjct: 1140 EFECHVERMLLICNQNLFNVALKKNLQEYIRSKQFDRRSWYPQGLKQKAGKAQGAQNSHS 1199
Query: 536 LFNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVN---- 590
L + K++ADV EA+IGA +LS E + + + V N
Sbjct: 1200 LAD--------------KSIADVCEAIIGASYLSYTDEGNFDMAVRAVTAVVRNKNHDMK 1245
Query: 591 ----------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEI 638
+P + + A ++ ++ + Y F+ P+LL A H SY +
Sbjct: 1246 SYEDYYKAFKMPIWQAAEPSAVQMEASLQIKEQMGYEFKSPALLRSAFKHPSYPRQFESV 1305
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQRLEFLGDA+LD + +L+ K+P P LT+ + A V+N SV+ G ++
Sbjct: 1306 PN-YQRLEFLGDALLDMVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRR 1364
Query: 699 ILHASQELYKWINITVDSFERLSLE-----------STFGWESETSFPKALGDIIESLSG 747
+LH + + I VD+ E S W + PK L D++E+ G
Sbjct: 1365 VLHFNSIMANQIKDYVDALTHARQEAEAVAQISGTVSRDYWLNVKHPPKFLSDVVEAYIG 1424
Query: 748 AIFVDSGCNK---EVVFES-IRPLLEPM 771
AIFVDSG + + FE IRP M
Sbjct: 1425 AIFVDSGYDYGQVQAFFEKHIRPFFADM 1452
>gi|170181362|gb|ACB11577.1| dicer-1 CG4792-PA-like protein [Apis mellifera]
Length = 1946
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 169/362 (46%), Gaps = 74/362 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---DFVNV-----PYER------ 595
+ K++AD VEALIGA+L G L+F+ +GI V + +N+ P +R
Sbjct: 1590 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPKDRIPGSTP 1649
Query: 596 -----------------------------QFQVQAER-----LVNVRHLESLLNYSFRDP 621
++ V E L LE + Y F D
Sbjct: 1650 FVKGKNEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKNIGYKFHDI 1709
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1710 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGALTDLRSALV 1769
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES--TFGWE---------- 729
NN +A +V+ G HK+ H S L +I ++ F R+ E+ + G E
Sbjct: 1770 NNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSIGEEYYLIGEEECE 1825
Query: 730 --SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAREL 785
+ PKALGD+ ESL+GAI++ SG + + V+ +++ I + + P REL
Sbjct: 1826 EAEDVEVPKALGDVFESLAGAIYLGSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIREL 1885
Query: 786 NEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
E + F + +A + VTV+V G+ FK + AK A+K LK
Sbjct: 1886 LELEPETAKFGKPEKLAD--GRRVRVTVDVFGKGS-FKGIGRNY--RIAKCTAAKCALKK 1940
Query: 845 LK 846
LK
Sbjct: 1941 LK 1942
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
P + S L + + + L +H + ++ +L+A+T +G +LE LET+GDS
Sbjct: 1389 TPKFTYHFDSNLFSFDFQPKLENHPGPSPSL----ILQALTMSNANDGINLERLETIGDS 1444
Query: 462 FLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP-KMWM 520
FLKYA + L+ TY N HEG LS + + +SN L +LG L + F+P W+
Sbjct: 1445 FLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWL 1504
Query: 521 IP 522
P
Sbjct: 1505 PP 1506
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1409 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1465
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1466 LSHLRSKQVSN 1476
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQL-CFDQELL----LNGRRIFH 356
Q +Y+ + +LN S F ND G T++++Y ++Y IQ+ DQ LL + R F
Sbjct: 942 QYFYVAEICTNLNPKSSFPGNDYG--TFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFL 999
Query: 357 AQNYLSK------CRQEKQREPSKISFE----LPPELCRIIMGPMSLSTFYSFTFVPSIM 406
Y+++ E+ + + + E L ELC I P S + +P I+
Sbjct: 1000 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELCAI--HPFPASLWRQAVCLPCIL 1057
Query: 407 HRLQSLLLAVNLK 419
+R+ +LLLA ++
Sbjct: 1058 YRINALLLANQIR 1070
>gi|115401870|ref|XP_001216523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190464|gb|EAU32164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1635
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 195/426 (45%), Gaps = 60/426 (14%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
P+K +P C I P + + F F+ +I+ RL++ L+A L +L Q+V
Sbjct: 850 PAKARI-IPATACTIDRLPFTDTIFG--LFISAILDRLEATLIATRLCETIL----QDVQ 902
Query: 432 IPTSK-VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
+++ V+ AI+ Q + E GDS LK+ S QL+ + N EG LS +D I
Sbjct: 903 FSSTRHVITAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEI 962
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ N L + D L FI T F P+ W P L +E+ + V G++ +
Sbjct: 963 VQNNRLARAALDVGLDAFILTRRFTPRKWTAP-------------LISEKAVEVAGKRPL 1009
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHL 610
SK +ADVVE+LIGA GG+ + R+ +++ + A ++N L
Sbjct: 1010 SSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEICPI-TPPPVHESAPHVMN-DSL 1067
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ L Y+F + +LLVEALTH S + YQRLEFLGDAVLD ++ + +
Sbjct: 1068 KQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVHAMAHHAVECPQ 1127
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKH-------------ILHASQ---ELYKWI---- 710
G++T ++ A N + A ++ + + L + Q EL++++
Sbjct: 1128 GEMTMIKHALTNANLLAFFCMEFVVAQEHTDVDAVPAAGGFALRSEQKPIELWRFMRSEA 1187
Query: 711 ---------------NITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
+ + L + + W+ S+ + K DI+ES+ GAIFVDS
Sbjct: 1188 LDLNNARETVLHRHSQLRAEIVHALHHGAQYPWQALSQLNADKFFSDIVESILGAIFVDS 1247
Query: 754 GCNKEV 759
+ +V
Sbjct: 1248 RGDLDV 1253
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQR EF GD+VL + ++ LY ++P G L++ R V N+ A +++ GL
Sbjct: 921 PTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAF 980
Query: 699 ILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKE 758
IL KW T ++E G +S K L D++ESL GA ++D G K
Sbjct: 981 ILTRRFTPRKW---TAPLISEKAVEVA-GKRPLSS--KVLADVVESLIGAAYMDGGQAK- 1033
Query: 759 VVFESIRPLLEPM----ITPETMRLQPARELNEYCQKH 792
IR LL + ITP + +N+ ++H
Sbjct: 1034 -AHTCIRRLLPEIEICPITPPPVHESAPHVMNDSLKQH 1070
>gi|121807816|sp|Q2VF18.1|DCL2_CRYPA RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL-2; Includes: RecName:
Full=ATP-dependent helicase DCL-2
gi|77632776|gb|ABB00357.1| dicer-like protein 2 [Cryphonectria parasitica]
Length = 1451
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 219/517 (42%), Gaps = 92/517 (17%)
Query: 401 FVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLG 459
+PS++ + L+A L + +L + NV++ ++EAI K + + E +E LG
Sbjct: 954 LMPSLVCYTELYLVAAELSRKVLAPLRISNVSM----LVEAICAKSARTPENYERIEFLG 1009
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LK + L T + EG+LS+ KDR++SNA LC+ CD +L F+ T+ K W
Sbjct: 1010 DSILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDAELDQFLVTQQLVTKGW 1069
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
P ++D + ++ ++ + KT+ADVVEALIG GG L +
Sbjct: 1070 QPP-------YMSDLAKQDQEP---ESKRILSPKTLADVVEALIGVSFVDGGLPKALECI 1119
Query: 580 DRIGIKVDFVNVPYERQFQVQAERL------------VNVRHLESLLNYSFRDPSLLVEA 627
R+ F+ R F + L +++ LE L+ YSF + +LLVEA
Sbjct: 1120 -RL-----FIPESQPRPFSEVRDILFGAAEPKGMKLPADLQLLEQLIEYSFCEKALLVEA 1173
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
+TH SY + CY RLEF+GDA+LDY+I ++ P L + +R+A VN D
Sbjct: 1174 VTHPSYNVSGTVACYDRLEFIGDAILDYIIVEEVFALEPALENWQMHLLRTALVNADILG 1233
Query: 688 L-----------------------------------------SSVKHGLHKHILHASQEL 706
+ V L + +S EL
Sbjct: 1234 FLIMEWSYKQMGFEVCRANEGDSDSKSSGDSTSDKASPRLEQTEVPIPLWSFMRQSSAEL 1293
Query: 707 YKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSGAIFVDSG-- 754
IT FE L S T +P AL D E+L GAI+VD+G
Sbjct: 1294 TMEREITKARFEELRDPILEAMRSGTHYPWALFARLHAQKFYSDFFEALVGAIWVDAGPG 1353
Query: 755 ---CNKEVVFESIRPLLEPMITPETMRLQPARELNEYC--QKHHFSMKKTVAPRINGKAA 809
C V + P L+ ++ + L P EL ++ + +K+T+ +GK
Sbjct: 1354 FDACRAFVARSGVLPYLKRLLRDQVHVLHPKEELGRLAGRERVEYVVKETLKDDGDGKEW 1413
Query: 810 VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
EV G KE ++ A+ + + LK
Sbjct: 1414 -ACEVRVGGRYVTDVTGCLFKEESRVKAATQACEILK 1449
>gi|350646449|emb|CCD58848.1| ribonuclease III, putative [Schistosoma mansoni]
Length = 928
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 180/387 (46%), Gaps = 54/387 (13%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTY-QNHHEGLLSVKKDRIISN 493
+ ++E T ++ LE LE GDSFL + A+ ++ T Q+ EG LS K+ ++SN
Sbjct: 530 NNLIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSN 589
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
A LC + CD K + + F P +P Y + + + ++Y ++ K
Sbjct: 590 AHLCDIACDLKWYEYCTGQTFSPPEHFLP----PCYSVASEACKYDPRLYT----RLTDK 641
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNVPYERQFQVQAE---------- 602
++AD+VEALIG FL G + L I V + + ++ ++V+A
Sbjct: 642 SLADMVEALIGCFLLRSGLSAAFNLLHYFQICPVSWSTLKNDKHYKVEAPWHFFLQPKLY 701
Query: 603 -------------RLVNVR------------HLESLLNYSFRDPSLLVEALTHGSYMLPE 637
R +++ L+ L Y F+ LL EA+TH S + +
Sbjct: 702 SELNCGNALNASCRSLHISKEIILELNQRFFQLQEKLGYYFKGIELLAEAMTHQSSINKQ 761
Query: 638 IPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHK 697
YQRLEFLGD++L ++I+ YL+ K P SPG LT RS V+N A V+H ++
Sbjct: 762 YWGNYQRLEFLGDSILGHIISNYLFQKCPNSSPGALTTARSTVVSNINLANVVVEHDIYP 821
Query: 698 HI------LHASQELYKWINITVDS-FERLSLESTFGWESETSFPKALGDIIESLSGAIF 750
I L A + K I+ DS FER+ L + S K L D+ ES+ GAIF
Sbjct: 822 FIDFGNCSLKACIDDIKSIHRQTDSHFERIELITKK--VSSGLNVKVLADVFESILGAIF 879
Query: 751 VDSGCNKEVVFESIRPLLEPMITPETM 777
VDS N +V I L +T + +
Sbjct: 880 VDSNGNHQVASSIIHRFLGKTMTTQLL 906
>gi|388330447|gb|AFK29469.1| Dicer1 [Locusta migratoria]
Length = 2324
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 161/342 (47%), Gaps = 76/342 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI----------KVDFVN-VPYERQF- 597
+ K+VAD VEALIGA+L G L+F+ +GI K N VP ER
Sbjct: 1959 IPDKSVADCVEALIGAYLIACGPRGALLFMAWLGICVLPREEIILKTSSRNAVPKERPVG 2018
Query: 598 ------------------QVQ--------AERLVNV----RHLESLLN----------YS 617
QV+ + L NV R LE+LL+ Y
Sbjct: 2019 SLKPTFVYEDSDGTAVWKQVRYGTLQSPSSPLLRNVSNPERKLEALLDGFDVFEQKIQYK 2078
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
FRD S L+++LTH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+R
Sbjct: 2079 FRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLR 2138
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES------------- 724
SA VNN +A +V++G HK H S L N VD F R+ E+
Sbjct: 2139 SALVNNTIFASLAVRYGFHKFFRHLSPGL----NEVVDRFVRIQEENGHTISEEYYLIEE 2194
Query: 725 -TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QP 781
+ PKALGD+ ES++GAIF+DS + + V+ +++ I + + P
Sbjct: 2195 EECEEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWRVYYRMMKLEIEQFSTNVPKSP 2254
Query: 782 ARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFK 822
REL E + F + +A + V+VEV G +FK
Sbjct: 2255 IRELLELEPETAKFGKPEKLAD--GRRVRVSVEVFGKG-IFK 2293
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1784 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1843
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG + F+P W+ P
Sbjct: 1844 NLYRLGRRKVFGESMIATKFEPHDNWLPP 1872
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 43/258 (16%)
Query: 190 KIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRD--NLEIDYLLLPASEQS- 246
K++L+ V+L + +I++ +++ + + K L + D E Y ++P +++
Sbjct: 1098 KLELSDTNVVLTKE-KISMIVTFLNYTFTSVLRLQKYLMMFDPQASENSYFIVPTRKKTK 1156
Query: 247 -----IDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTP--- 298
+DWE + + +K C + ++ + Y+ V P
Sbjct: 1157 DSLAEVDWEFLERI----------YKECDLRPQPVPQEERALFVFDAAKYHDAVIMPWYR 1206
Query: 299 --HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN-----G 351
Q +Y+ + HLN S F ++ T+ ++Y ++Y IQ+ +++ LL+
Sbjct: 1207 NQDQPQYFYVAEICSHLNPKSTFPGSEYK--TFDEYYFKKYNIQIQNEKQPLLDVDHTSA 1264
Query: 352 RRIFHAQNYLSK------CRQEKQREPSKISFE----LPPELCRIIMGPMSLSTFYSFTF 401
R F Y+++ E+ + + + E L PELC + P SL +
Sbjct: 1265 RLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRKAVC 1322
Query: 402 VPSIMHRLQSLLLAVNLK 419
+P I++R+ +LLLA ++
Sbjct: 1323 LPCILYRINALLLADQIR 1340
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS++++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1783 PSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1839
Query: 681 VNN 683
V+N
Sbjct: 1840 VSN 1842
>gi|340386816|ref|XP_003391904.1| PREDICTED: endoribonuclease Dicer-like, partial [Amphimedon
queenslandica]
Length = 380
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 149/343 (43%), Gaps = 83/343 (24%)
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD--------------------- 587
KV K+VAD VEALIGA GG G+ + GIK++
Sbjct: 20 KVTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSNTHSLLL 79
Query: 588 ------FVN--------------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
F + P ++ + L V ++ + YSF++ LL+EA
Sbjct: 80 AESDSIFSSHFRSPPAPKLASKLAPLDKAISTRNRILPQVSSIQGKIEYSFKNELLLIEA 139
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
+TH SY +I CYQRLEFLGDA+LDYL+T ++Y + PG +T++RSA V N +A
Sbjct: 140 MTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGRMTELRSALVCNSRFA 199
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF------------- 734
++ LH+ + H S L+ + S ++ E E S
Sbjct: 200 ELAISLNLHRSLCHGSPNLFNDMKKYAQSLKQREKEDRERKLEEMSINDDDSAQVIVESM 259
Query: 735 ------------------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET 776
PK+L D E+L+GA+F+DSG N + V+E+ P LEP+ E
Sbjct: 260 EDGDIDDDEDEDDDIIEPPKSLSDCFEALAGAVFIDSGMNLQTVWETFSPFLEPLF--EK 317
Query: 777 MRLQPARELNEYCQKHH-----FSMKKTVAPRINGKAAVTVEV 814
+ P L C+ H +KK V GK+ +E+
Sbjct: 318 FKNDPP--LTPICELHKLIPKDLEVKKKVLSE--GKSQCIIEI 356
>gi|261195592|ref|XP_002624200.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239588072|gb|EEQ70715.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
Length = 1509
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 195/464 (42%), Gaps = 78/464 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ S F T PSIMH+++ L+A L +L S V+
Sbjct: 958 PARDCSIDKLPLEFSLFALLT--PSIMHKVEIYLIAEQLNKTILKPV---AFTDLSLVVT 1012
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI+ +E + + +E LGDS LK+ + QL HEGLLS KD ++SN L
Sbjct: 1013 AISASVAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYA 1072
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L FI + F W P N E + + ++++ +KT+ADVV
Sbjct: 1073 AVETGLDKFILVDVFTGAKWR-PRYNKVHLESEEQGI---------PQREMTTKTLADVV 1122
Query: 560 EALIGAFLSTGGEN-------------VGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
EAL+GA GGE + F DRI + V YE R
Sbjct: 1123 EALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDRINALYNSVPEAYENI------RTSW 1176
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +ESLL YSF LV+A TH S YQRLEF+GDA+LD++I +L+N
Sbjct: 1177 FQEIESLLGYSFNKKVFLVQAFTHPSNP-GSTTSSYQRLEFVGDAILDHIIVHHLFNSSR 1235
Query: 667 TLSPGDLTDMRSASVNNDCYAL-----------SSVKHGLHKHILHA--SQELYKW---- 709
L D+ MR+A N D A S V K+ + + +++++ W
Sbjct: 1236 NLPHFDMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKKNTVTSLTTRKVFLWQYMR 1295
Query: 710 ------------------INITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAI 749
+ D E L +T+ W S K D+IES+ GAI
Sbjct: 1296 HGTSWELAAAQQQTANQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAI 1355
Query: 750 FVDS-----GCNKEVVFESIRPLLEPMITPETMR-LQPARELNE 787
F+DS C + + L M+ E+M + P + L +
Sbjct: 1356 FIDSHGSLDACTAFLERIGLMKFLRRMLVEESMDIMHPKQRLGQ 1399
>gi|449493233|ref|XP_004159229.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 132/245 (53%), Gaps = 19/245 (7%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E++LNY FRD LL EA T SY PE ++RLE++GD+VL++LIT Y P LS
Sbjct: 37 IEAILNYEFRDKRLLEEAFTDASYS-PENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 95
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
PG LT +R+A+V+ + A ++ HG H+++ H +L++ I S E L S
Sbjct: 96 PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSN---- 151
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
PK L DI+ES GA+F DS + + V++ + L+EP+IT +TM+ P EL E C
Sbjct: 152 GMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKELMEPLITLKTMKKHPMTELTEMC 210
Query: 790 QKHHFSMKKTVAPRINGKAAVTV----EVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
QK S+K R + V +V G+ K K A+ A+K L++L
Sbjct: 211 QKR--SLKLEFRDRWEETKEIEVLIEKQVVGKGSYRK-------KLIAQNRAAKNALENL 261
Query: 846 KASFP 850
FP
Sbjct: 262 DTFFP 266
>gi|239610437|gb|EEQ87424.1| dicer-like protein 2 [Ajellomyces dermatitidis ER-3]
Length = 1509
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 195/464 (42%), Gaps = 78/464 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ S F T PSIMH+++ L+A L +L S V+
Sbjct: 958 PARDCSIDKLPLEFSLFALLT--PSIMHKVEIYLIAEQLNKTILKPV---AFTDLSLVVT 1012
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI+ +E + + +E LGDS LK+ + QL HEGLLS KD ++SN L
Sbjct: 1013 AISASVAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYA 1072
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L FI + F W P N E + + ++++ +KT+ADVV
Sbjct: 1073 AVETGLDKFILVDVFTGAKWR-PRYNKVHLESEEQGI---------PQREMTTKTLADVV 1122
Query: 560 EALIGAFLSTGGEN-------------VGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
EAL+GA GGE + F DRI + V YE R
Sbjct: 1123 EALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDRINALYNSVPEAYENI------RTSW 1176
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +ESLL YSF LV+A TH S YQRLEF+GDA+LD++I +L+N
Sbjct: 1177 FQEIESLLGYSFNKKVFLVQAFTHPSNP-GSTTSSYQRLEFVGDAILDHIIVHHLFNSSR 1235
Query: 667 TLSPGDLTDMRSASVNNDCYAL-----------SSVKHGLHKHILHA--SQELYKW---- 709
L D+ MR+A N D A S V K+ + + +++++ W
Sbjct: 1236 NLPHFDMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKKNTVTSLTTRKVFLWQYMR 1295
Query: 710 ------------------INITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAI 749
+ D E L +T+ W S K D+IES+ GAI
Sbjct: 1296 HGTSWELAAAQQQTADQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAI 1355
Query: 750 FVDS-----GCNKEVVFESIRPLLEPMITPETMR-LQPARELNE 787
F+DS C + + L M+ E+M + P + L +
Sbjct: 1356 FIDSHGSLDACTAFLERIGLMKFLRRMLVEESMDIMHPKQRLGQ 1399
>gi|327349134|gb|EGE77991.1| dicer [Ajellomyces dermatitidis ATCC 18188]
Length = 1482
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 195/464 (42%), Gaps = 78/464 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ S F T PSIMH+++ L+A L +L S V+
Sbjct: 932 PARDCSIDKLPLEFSLFALLT--PSIMHKVEIYLIAEQLNKTILKPV---AFTDLSLVVT 986
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI+ +E + + +E LGDS LK+ + QL HEGLLS KD ++SN L
Sbjct: 987 AISASVAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYA 1046
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L FI + F W P N E + + ++++ +KT+ADVV
Sbjct: 1047 AVETGLDKFILVDVFTGAKWR-PRYNKVHLESEEQGI---------PQREMTTKTLADVV 1096
Query: 560 EALIGAFLSTGGEN-------------VGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
EAL+GA GGE + F DRI + V YE R
Sbjct: 1097 EALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDRINALYNSVPEAYENI------RTSW 1150
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +ESLL YSF LV+A TH S YQRLEF+GDA+LD++I +L+N
Sbjct: 1151 FQEIESLLGYSFNKKVFLVQAFTHPSNP-GSTTSSYQRLEFVGDAILDHIIVHHLFNSSR 1209
Query: 667 TLSPGDLTDMRSASVNNDCYAL-----------SSVKHGLHKHILHA--SQELYKW---- 709
L D+ MR+A N D A S V K+ + + +++++ W
Sbjct: 1210 NLPHFDMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKKNTVTSLTTRKVFLWQYMR 1269
Query: 710 ------------------INITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAI 749
+ D E L +T+ W S K D+IES+ GAI
Sbjct: 1270 HGTSWELAAAQQQTADQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAI 1329
Query: 750 FVDS-----GCNKEVVFESIRPLLEPMITPETMR-LQPARELNE 787
F+DS C + + L M+ E+M + P + L +
Sbjct: 1330 FIDSHGSLDACTAFLERIGLMKFLRRMLVEESMDIMHPKQRLGQ 1373
>gi|426194802|gb|EKV44733.1| hypothetical protein AGABI2DRAFT_209093 [Agaricus bisporus var.
bisporus H97]
Length = 1524
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 150/571 (26%), Positives = 247/571 (43%), Gaps = 90/571 (15%)
Query: 355 FHAQ-NYL--SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQS 411
FH + N+L +K R P L PE I + S Y+F +PS++ L+
Sbjct: 932 FHPRCNFLIPTKPRDPGSSAPEIKYVYLMPEFTGITLIS-STEVEYAF-LLPSVLRSLEI 989
Query: 412 LLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQL 471
L +L++ L IP + + A+T E ++ + LETLGD+ LK+ + Q+
Sbjct: 990 NLTMASLRSNLFMPSPSLQDIPLALLSNAMTASSAGEKYNYQRLETLGDTVLKFLVALQV 1049
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW-------MIPGD 524
Y HEG L+ KKD ++N L K +H+L +I E + W ++P
Sbjct: 1050 LVEYPLWHEGYLTKKKDHTVANVNLAKENINHRLYRWIIKEIMLGRKWRPRYSTKLLP-- 1107
Query: 525 NSGSYELNDHSLFNERKIYV-----------------TGRKKVKSKTVADVVEALIGAFL 567
+ L++ + E + V + + + +K +ADVVE+LIGA
Sbjct: 1108 --PTTPLSEEKIVEELLMVVDEGAELSSKGAAKKKKKSKNQGLSTKILADVVESLIGAAY 1165
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYE-RQFQVQAERLVNV----RHLESLLNYSFRDPS 622
GG +G G+ + ++ P + F E N+ ++E +L Y+F+
Sbjct: 1166 IHGGFPLGYECTKLFGLGLRWLPPPERIKDFLGAVEPDKNIPSALYYVEKMLGYTFKHKV 1225
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK-YPTLSPGDLTDMRSASV 681
LL+EALTH SY Y+R+EFLGD+VLD ++T YLY+ SPG + RS+ V
Sbjct: 1226 LLLEALTHASYQQDARTVSYERMEFLGDSVLDMVVTDYLYHAPGKNYSPGHIHLRRSSVV 1285
Query: 682 NNDCYAL----SSVKHG---------------------LHKHILHASQELYKWINITVDS 716
N A +SVK L + +LH+S + T
Sbjct: 1286 NTHFLAYICLKTSVKFDALMPRADDEGIELLADAQEVMLWQCLLHSSSRIMDDQANTHTR 1345
Query: 717 F--------ERLSLESTFGWESETSF--PKALGDIIESLSGAIFVDSGCN----KEVVFE 762
F E L ++ F W + T PK DIIES+ GA+F+DS + ++V+ +
Sbjct: 1346 FKKRREEIEEGLMNDTIFPWAALTRLQAPKFFSDIIESVIGAVFLDSNGDIDTARDVITK 1405
Query: 763 -SIRPLLEPMITPETMRLQPARELNEYCQKH------HFSMKKTVAPRINGKAAVTVEVH 815
I P LE ++ P ++++ KH F ++ V K +V V+
Sbjct: 1406 LGILPTLERIVHDNVDVWHPVSRISQWASKHEKKLGWQFEKERGVV-----KCSVLVDGE 1460
Query: 816 ANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ ++ K +A++ +SL+
Sbjct: 1461 VEACAMDDYRGASTQDEVKLIAAENASRSLR 1491
>gi|357619534|gb|EHJ72068.1| putative dicer 1 [Danaus plexippus]
Length = 754
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 134/254 (52%), Gaps = 18/254 (7%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L Y FRD SLL+ ALTH S + CYQRLEFLGDA+LDYLIT +LY S
Sbjct: 505 LENTLQYRFRDRSLLLTALTHASCHNNTLTDCYQRLEFLGDAILDYLITRHLYEDPRRHS 564
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS----QELYKWINITVDSFERLSLEST 725
PG LTD+RSA VNN +A + +HG HK+ H S + L K++ I ++ +S E
Sbjct: 565 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLTKYVKIQEENGHSISEEHY 624
Query: 726 FGWESE------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
E E PKALGD+ ES++GAIF+DSG + V+ ++ LL + +
Sbjct: 625 LIQEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLAAVWRAVGGLLRAELDAFSAAA 684
Query: 780 --QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E F + +A + V VEV G+ FK + AK
Sbjct: 685 PKSPVRELLEAEPDTAKFGKPERLAD--GRRVRVCVEVFGRGS-FKGVGRNY--RIAKGT 739
Query: 837 ASKEVLKSLKASFP 850
A++ L+ L++ P
Sbjct: 740 AARCALRHLRSVRP 753
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 31/152 (20%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLK+A + L+ HEG LS + +
Sbjct: 292 SVILQALTMSNANDGINLERLETIGDSFLKFAITAYLYCALPAVHEGKLSHMRSK----- 346
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
G ++ +P++ D++G + ++L + I K+
Sbjct: 347 -----------QGDVKDGENEPQV-----DSTGCF--IPYNLITQHSI--------PDKS 380
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV 586
+AD VEALIGA+L G L+F+ +GI V
Sbjct: 381 IADCVEALIGAYLLECGPRGALLFMSWLGITV 412
>gi|195380844|ref|XP_002049171.1| GJ20897 [Drosophila virilis]
gi|194143968|gb|EDW60364.1| GJ20897 [Drosophila virilis]
Length = 1722
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 209/535 (39%), Gaps = 134/535 (25%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E E LGD FLK +A+ L Y + +EG+L+ K ++SN
Sbjct: 1194 GEFLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANKYPDWNEGILTQVKSTLVSNR 1253
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK----------------MW------------------- 519
L + +P I + F PK +W
Sbjct: 1254 NLLYCLSETDIPTRICSTLFTPKYTWLPPSLGLPQNVLALWKEKPELAALVGPHNIRNLC 1313
Query: 520 -------------------MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
+ G + Y + F+ + G ++ K +AD +E
Sbjct: 1314 ISEEEVFGNGKCGEHVYRSFVDGCQANQYTHHAGMDFSSEINFCVGLVQMPDKLIADTLE 1373
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQ----------AER-----LV 605
AL+G + G G L+ GI + P + +Q ++R L+
Sbjct: 1374 ALLGVVVKNYGLQHGFRMLEYFGICKSDIGKPLTQLLDLQLGSARMRTNISQREVDGFLI 1433
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N +HLE L Y+FRD + L++ALTH S + CYQ LEF+GDA+LD+LI+ Y++
Sbjct: 1434 NHQHLEQNLGYTFRDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFEHK 1493
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV----------- 714
++PG LTD+RSA VNN A V+H H IL + L + I V
Sbjct: 1494 TRMTPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLTESIQSFVQFQESQNHRVT 1553
Query: 715 -----------------DSFERLSLEST------------------FGWESETSFPKALG 739
DS + L L F PKALG
Sbjct: 1554 NHVRILMEESDVQPEPLDSDDELELAEAAQQQKLAINGADAPHVGEFNISHNVDVPKALG 1613
Query: 740 DIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEYCQKHHFSMK 797
D++E+L A+++D + ++ + L EP + + L P R+L E H K
Sbjct: 1614 DVLEALIAAVYLDCR-DLTTTWQVVYRLFEPELLEFSRNVPLNPIRQLFE-----HKLAK 1667
Query: 798 KTVAPRI--NGKAAV---------TVEVHANGTLFKHTHADADKETAKKVASKEV 841
T +P I N + V T++V+ G K A K +K+A E
Sbjct: 1668 PTFSPPIMDNNQVMVTCQFICMDKTIKVYGFGNNGKQAKLSAAKHALQKLAKCEA 1722
>gi|449453708|ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 131/245 (53%), Gaps = 19/245 (7%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E++LNY FRD LL EA T SY PE ++RLE++GD+VL++LIT Y P LS
Sbjct: 37 IEAILNYEFRDKRLLEEAFTDASYS-PENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 95
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
PG LT +R+A+V+ + A ++ HG H+++ H +L++ I S E L S
Sbjct: 96 PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSN---- 151
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
PK L DI+ES GA+F DS + V++ + L+EP+IT +TM+ P EL E C
Sbjct: 152 GMIKAPKVLADIVESTIGAVFADSNF-IDTVWKIFKELMEPLITLKTMKKHPMTELTEMC 210
Query: 790 QKHHFSMKKTVAPRINGKAAVTV----EVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
QK S+K R + V +V G+ K K A+ A+K L++L
Sbjct: 211 QKR--SLKLEFRDRWEETKEIEVLIEKQVVGKGSYRK-------KLIAQNRAAKNALENL 261
Query: 846 KASFP 850
FP
Sbjct: 262 DTFFP 266
>gi|326485005|gb|EGE09015.1| dicer-like protein 2 [Trichophyton equinum CBS 127.97]
Length = 1417
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 174/359 (48%), Gaps = 61/359 (16%)
Query: 442 TTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGC 501
++ +E + + LE LGDS LK AS QL + HEG+LS KKD I+SN+ L K
Sbjct: 971 SSTSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAV 1030
Query: 502 DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEA 561
D L FI T F W P NS + N KI +++ +KT+ADVVE+
Sbjct: 1031 DTGLDQFILTTCFTGAKWR-PLYNSTYAD-------NAGKIGEKSTRELSTKTLADVVES 1082
Query: 562 LIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYERQFQVQAERLVNVRHL 610
LIGA + GGEN L +FL I I++ F + P F R + + +
Sbjct: 1083 LIGAAIIDGGENKVLRCLELFLPEINWQPSGERIEILFDSAP---DFNDDCPRDI-MSKI 1138
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E L++YSF +LL +L+H S ++ + YQRLEFLGD++LD ++T L+ +
Sbjct: 1139 EPLIDYSFTKKALLATSLSHPSNLISRM--TYQRLEFLGDSILDNIVTRALFRCKKEIPH 1196
Query: 671 GDLTDMRSASVNNDCYA------------------------LSSVKH--GLHKHILHASQ 704
D+ +R+A VN D A ++S H L +++ H+S
Sbjct: 1197 QDMHLIRTALVNADFLAFLCMNTSTDVTREDVCVSPTGEVEVTSSTHQVSLWQYMSHSST 1256
Query: 705 ELYKWINITVDSFERLSLE--------STFGWE--SETSFPKALGDIIESLSGAIFVDS 753
++ + +FE L + +++ W S + PK DIIES+ GAIF+DS
Sbjct: 1257 DIVETQQAIARTFEELRDQIEKALRSGASYPWTLLSTLNAPKFFSDIIESILGAIFIDS 1315
>gi|302693114|ref|XP_003036236.1| hypothetical protein SCHCODRAFT_31237 [Schizophyllum commune H4-8]
gi|300109932|gb|EFJ01334.1| hypothetical protein SCHCODRAFT_31237, partial [Schizophyllum commune
H4-8]
Length = 1342
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 210/472 (44%), Gaps = 47/472 (9%)
Query: 391 MSLSTFYSFTFVPSIMHRLQSLL------LAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
+S + +PS++ R + LA+ L + D +Q +T+P + +
Sbjct: 888 LSEDILSALHILPSLLRRATDVYRADRARLALGLPYIERDLLIQALTLPCAGM------- 940
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
F+ + LETLGD+ L+ + + LF Y + HEG L+ + ISN L + +
Sbjct: 941 ----PFNNQRLETLGDAVLELSTTVHLFNKYPHRHEGQLTPLRQICISNKCLLTRAREVQ 996
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
L F+ +E +W D+ R+ +++ D +EA++G
Sbjct: 997 LERFLTSETHSLSIWDYVEDSEVPAR--------------CARRLFPRRSLQDCMEAILG 1042
Query: 565 AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNV-RHLESLLNYSFRDPSL 623
A TGG + L +G+ R + + ++ L++ L Y+FRD L
Sbjct: 1043 ASYLTGGIDTALHAGTALGLAFGGSVPWPRRYPRRRRVPTPDLFSELQAKLGYTFRDGGL 1102
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
L EALTH S+ + Y+RLEFLGDAV++ + YLY K+P + L+ R+ +V N
Sbjct: 1103 LCEALTHSSFASLDSYGSYERLEFLGDAVINLAVVDYLYRKFPDANSDQLSLPRARAVCN 1162
Query: 684 DCYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLESTF--GWESETSFPKALGD 740
+ SVKH LHK +L + EL IN E GW+ + PK L D
Sbjct: 1163 QALSALSVKHLQLHKSVLVNNVELSIAINKHAPILEDKPYPEILVKGWKLDP--PKVLSD 1220
Query: 741 IIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTV 800
I ES+ GA+FVD+G + E+ + +E ++ + L PA + + + K T
Sbjct: 1221 IFESIVGAVFVDTGYDYEITAAVVEQAMEGLL----VHLSPAMPRDPVSELIIWVAKSTC 1276
Query: 801 APRINGKAAVT------VEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+I + + ++ +GTL + ++K+AS+ L L+
Sbjct: 1277 REQIEFRFVRRKQYPDGIAIYLHGTLLAGPITTMNHLVSRKLASERALADLR 1328
>gi|320590575|gb|EFX03018.1| rnase3 domain containing protein [Grosmannia clavigera kw1407]
Length = 1246
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 186/417 (44%), Gaps = 76/417 (18%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK---VLEAITTKKCQE---------- 448
+P I+HR++S L+A+ ++ + IP + LEA+T K C
Sbjct: 700 IPVIIHRIESTLIALEATSV--------IGIPRIRPELALEAVT-KDCDNPDAQDETPLN 750
Query: 449 -----GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDH 503
G + E LE LGDSFLK A S LF + E V++ +I N L D
Sbjct: 751 FQAGMGRNYERLELLGDSFLKLATSIALFTLVPDKDEFEYHVQRMCMICNRNLFNNALDM 810
Query: 504 KLPGFIRTEPFDPKMWMIPG-DNSGSYELNDHSLFNE--------------RKIYVTGRK 548
KL +IR+ FD + W P + +G ND+ N ++ +
Sbjct: 811 KLEEYIRSREFD-RTWYPPTIEEAGKSTDNDNYSDNTPAPPSQNGLVLQKGKRTQLPTHH 869
Query: 549 KVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQV-------- 599
+ KT+ADV EA+IGA +L+T E + + + V P + +
Sbjct: 870 PLGDKTIADVCEAMIGAAYLTTYEERNFDLAVQAVSAVVKSKLHPMQSYAEYYTAYKPPG 929
Query: 600 ------QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDA 651
A +L + L Y FR P LL A TH SY + +P YQRLEFLGDA
Sbjct: 930 WQLCPSTAAQLHMAVSIAKDLGYQFRFPRLLRSAFTHPSYPRIYENLP-SYQRLEFLGDA 988
Query: 652 VLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI- 710
+LD I YL++K+ P LT+ + A V+N A SV G H+HIL S E+ K I
Sbjct: 989 LLDMAIVDYLFHKFSNKDPQWLTEHKMAMVSNQFLAFLSVSLGFHRHILSFSGEMRKQIL 1048
Query: 711 -NITVDSFERLSLE----------STFG---WESETSFPKALGDIIESLSGAIFVDS 753
+T ER+ E S F W T PKAL D++E+ GA+FVDS
Sbjct: 1049 EYVTKVEEERVRAESEAVEAGRPASEFARDYWVHVTHPPKALADVLEAYVGALFVDS 1105
>gi|154282055|ref|XP_001541840.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412019|gb|EDN07407.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1437
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 196/462 (42%), Gaps = 74/462 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ S F PSI+H ++ L+A L +L S V+
Sbjct: 878 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLIAEELNKTILRPI---AFTDLSLVIT 932
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI+ +E + + +E LGDS LK+ + QL T HEGLLS KD ++SN L
Sbjct: 933 AISASVAREATNYQRIEFLGDSILKFQTTLQLTATNLIWHEGLLSRAKDTVVSNKRLSYA 992
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L FI + F W P + DH E+ + ++++ +KT+ADVV
Sbjct: 993 AIEAGLDKFILLDVFTGAKWRPPYN-------KDHLESEEQGV---AQREMSTKTLADVV 1042
Query: 560 EALIGAFLSTGG----ENVGLIFLDRIGIK--VDFVNVPYERQFQVQAERLVN-VRHLES 612
EAL+ A GG E IFL I D VN Y + L + + +ES
Sbjct: 1043 EALLAAATLDGGQRKAEKCLEIFLPEIQWMPLEDRVNALYSSVPEAYENTLTSWFQEVES 1102
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N L
Sbjct: 1103 LVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVHHLFNAPRAL 1157
Query: 669 SPGDLTDMRSASVNND-----CYALSS-----------------------------VKHG 694
D+ MR+A N D C +S+ ++HG
Sbjct: 1158 PHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTKLTTRKVSLWQYMRHG 1217
Query: 695 LHKHILHASQELY-KWINITVDSFERLSLESTFGWESETSF--PKALGDIIESLSGAIFV 751
+ A Q+ ++ + D E L T+ W + F K D+IES+ GAIF+
Sbjct: 1218 TSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSRFHPQKFFSDLIESVLGAIFI 1277
Query: 752 DS-----GCNKEVVFESIRPLLEPMITPETMRL-QPARELNE 787
DS C + + L M+ E M L P + L +
Sbjct: 1278 DSHGSLDACTAFLERIGLMKFLRRMLVDEDMDLMHPKQRLGQ 1319
>gi|307190121|gb|EFN74275.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 1976
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 133/256 (51%), Gaps = 26/256 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE + Y FRD S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1719 ELEKSIGYKFRDSSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQH 1778
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
SPG LTD+RSA VNN +A +V+ G HK+ H S L ++ ++ F R+ E+
Sbjct: 1779 SPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGL----SVVINRFVRIQEENGHSI 1834
Query: 729 ESE--------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
E PKALGD+ ESL+GAI++DSG + + V+ +++ I
Sbjct: 1835 SEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQ 1894
Query: 775 ETMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKE 831
+ + P REL E + F + +A + VTV+V G+ FK +
Sbjct: 1895 FSTNVPKSPIRELLELEPETAKFGRPEKLAD--GRRVRVTVDVFGKGS-FKGIGRNY--R 1949
Query: 832 TAKKVASKEVLKSLKA 847
AK A+K LK LK+
Sbjct: 1950 IAKCTAAKCALKKLKS 1965
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1440 SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1499
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1500 NLYRLGRQKMLGESMIATKFEPHDNWLPP 1528
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1431 LKNHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1487
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1488 LSHLRSKQVSN 1498
>gi|134084339|emb|CAK48679.1| unnamed protein product [Aspergillus niger]
Length = 1531
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 197/458 (43%), Gaps = 76/458 (16%)
Query: 384 CRIIMGPMSLS-----TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C I + P+ +S T +S P+I+ R+ + L+++ L N T+ L
Sbjct: 982 CFICIEPLKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLAL 1035
Query: 439 EAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 1036 EAFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYH 1095
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPF----DPKMWMIPGDNSGSYELNDHSLFNER 540
V + +I N L D ++ +IR+ F D + + DHS R
Sbjct: 1096 VNRMCLICNKNLFNAAVDKEIYKYIRSRGFSRLTDAARHTWYPEGLKLLQGKDHS----R 1151
Query: 541 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL---------------DRIGIK 585
K + + KT+ADV EALIGA L +GG + +R
Sbjct: 1152 KATTESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDY 1211
Query: 586 VDFVNVP-YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCY 642
+ F +P Y+R+ AE ++ R +E L+Y FR P+LL A TH SY ++P CY
Sbjct: 1212 ISFYTIPKYQRRAADGAELYLS-RKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CY 1269
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA 702
QRLEFLGD+++D + L+ ++P P LT+ + A V+N +VK GLH H+ +
Sbjct: 1270 QRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYF 1329
Query: 703 SQELYKWINITVDSFERLSLESTFG---WESETSFPKA----------------LGDIIE 743
S L I + + ES W PK L D++E
Sbjct: 1330 SAPLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKVMTPSALRNTANVDGQCLPDMVE 1389
Query: 744 SLSGAIFVDSGCNKEVV----FESIRPLLEPMITPETM 777
+ GA+FVDS N EV+ + I+P E M +T
Sbjct: 1390 AYVGAVFVDSDFNFEVIERFFRDYIKPFFEDMAIYDTF 1427
>gi|195624966|gb|ACG34313.1| endoribonuclease Dicer [Zea mays]
Length = 329
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 8/242 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 664
+V +E+LL Y F D SL+ ALTHGS+ P P Y+RLE+LGD VL L++ ++
Sbjct: 47 DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMSREVFRT 106
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
Y TL PG LT +R+A+V+ + A +V GL++ + H + +L I ++ + + S
Sbjct: 107 YRTLQPGPLTRLRAANVDTEKLARVAVHRGLYRFLRHKAPKLQDQICFFIEEMRKYPVHS 166
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
+ PK L DI+ESL GAI++DS ++E V+ R L +P+I ET+ P E
Sbjct: 167 NGLLDP----PKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADPLIGLETLGKHPVSE 222
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L E+CQK H +K + ++ V+V +G + KE A+ A+K+ L
Sbjct: 223 LFEFCQKTHRGVKFL---KDEWDKSLKVQVLIDGEVVGSAIYGPKKEIAQNRAAKDALDK 279
Query: 845 LK 846
LK
Sbjct: 280 LK 281
>gi|325093360|gb|EGC46670.1| dicer-like protein [Ajellomyces capsulatus H88]
Length = 1436
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 195/462 (42%), Gaps = 74/462 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ S F PSI+H ++ LLA L +L S V+
Sbjct: 878 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLLAEELNKTILRPV---AFTDLSLVIT 932
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI+ +E + + +E LGDS LK+ + QL HEGLLS KD ++SN L
Sbjct: 933 AISASAAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSYA 992
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L FI + F W P + DH E+ + ++++ +KT+ADVV
Sbjct: 993 AIETGLDKFILLDVFTGAKWRPPCN-------KDHLESEEQGV---PQREMSTKTLADVV 1042
Query: 560 EALIGAFLSTGG----ENVGLIFLDRIGIK--VDFVNVPYERQFQVQAERLVN-VRHLES 612
EAL+ A GG E IFL + D VN Y + L + + +ES
Sbjct: 1043 EALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDRVNALYSSVPEAYENTLTSWFQEVES 1102
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N TL
Sbjct: 1103 LVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVYHLFNAPRTL 1157
Query: 669 SPGDLTDMRSASVNND-----CYALSS-----------------------------VKHG 694
D+ MR+A N D C +S+ ++HG
Sbjct: 1158 PHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTKLTTRKVSLWQYMRHG 1217
Query: 695 LHKHILHASQELY-KWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFV 751
+ A Q+ ++ + D E L T+ W S K D+IES+ GAIF+
Sbjct: 1218 TSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSRLHAQKFFSDLIESVLGAIFI 1277
Query: 752 DS-----GCNKEVVFESIRPLLEPMITPETMRL-QPARELNE 787
DS C + + L M+ E M L P + L +
Sbjct: 1278 DSHGSLEACTAFLERIGLMKFLRRMLVDEDMDLMHPKQRLGQ 1319
>gi|395331143|gb|EJF63525.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 205/459 (44%), Gaps = 73/459 (15%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQN--VTIPTSKVLEAITTKKCQEGFHLESLETL 458
+PSI+ L L +L+ L QN T+ ++ AIT QE FH + LETL
Sbjct: 985 LLPSILRWLAMALTVHSLRTSLFK---QNPVSTVALRHLVTAITAPAAQERFHYQRLETL 1041
Query: 459 GDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM 518
GD+ LK+ S L+ + HEG LS KKD ++N L + L +I + F P+
Sbjct: 1042 GDTVLKFITSNLLYADFPLWHEGYLSRKKDHAVANVNLARWAVKKGLYRWIIRDRFIPRK 1101
Query: 519 WMIP--GDNSGSYE--LNDHSL-------------FNERKIYVTGRKKVKSKTVADVVEA 561
W P +G+++ L+D S N ++ + + +K +ADVVE+
Sbjct: 1102 WK-PHYSSAAGAFDEILDDRSREGTPTASDAAAQNGNSKESRKGKAEDLSTKMLADVVES 1160
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRH----LESLLNYS 617
LIGA GG + + + + + + +P + + ++ +E ++NY
Sbjct: 1161 LIGAAYEDGGFDRAIDCVTAFNLGLSWKKLPEYIGAMHAVDDIDDIPEQLALVEQMINYR 1220
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYPTLSPGDLTDM 676
F + LV+ALTH SY +RLEFLGDA LD ++ YLY+ + SPG +
Sbjct: 1221 FARRTFLVQALTHASYQGDFATMSLERLEFLGDAALDMIVVDYLYHAEGKDYSPGYMHIK 1280
Query: 677 RSASVNNDCYALSSVK---------------HGLHKHILHASQELYKW------------ 709
+ A VN+ A + +K HGL + SQ++Y W
Sbjct: 1281 KMAVVNSHILAYTCLKTAVTVESTMPTWSPEHGLEA--VDDSQQVYLWQCLLHSSHRVLE 1338
Query: 710 -INITVDSFER--------LSLESTFGWESETSF--PKALGDIIESLSGAIFVDSGCNKE 758
N+T +++ L ++ + W TS PK + D++ES+ GA++VDS +
Sbjct: 1339 DQNLTFLRYQKHGAEIADALENDAVYPWAGLTSLQAPKFISDMVESILGAVYVDSFGDLG 1398
Query: 759 VVFESIRPL-----LEPMITPETMRLQPARELNEYCQKH 792
V + + L LE ++ + L P L + +H
Sbjct: 1399 KVRQVMETLGLMRVLERVVHDDVDALHPVSRLEIWAAQH 1437
>gi|238499729|ref|XP_002381099.1| dicer-1, putative [Aspergillus flavus NRRL3357]
gi|220692852|gb|EED49198.1| dicer-1, putative [Aspergillus flavus NRRL3357]
Length = 605
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 183/416 (43%), Gaps = 52/416 (12%)
Query: 384 CRIIMGPMSLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C + + P+ +S S P+I++RL + L+A+ N L ++++ + L
Sbjct: 78 CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIALEGCNTL------DLSVKPAYAL 131
Query: 439 EAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 132 EAFTKDSDNTEEHRVQQIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDFH 191
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + +I N L +L +IR+ F W G H + +K+
Sbjct: 192 VNRMCLICNKNLFNTALKKELYQYIRSRGFSRHTWYPDGLTLL------HGRDHRKKVSA 245
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGG-ENVGLIFLDRIGIKVDFVN------VPYER-- 595
+ ++ KTVADV EALIGA L +GG N + + + VD N Y
Sbjct: 246 ESKHALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSSY 305
Query: 596 ---QFQVQAERLVNV---RHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEF 647
++Q Q+ + R +E L Y F+ P LL A TH SY ++P CYQRLEF
Sbjct: 306 MLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVP-CYQRLEF 364
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGD++LD + L+ +YP P LT+ + A +N +VK GLH H+ H S L
Sbjct: 365 LGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMASNKFLGALAVKLGLHTHLRHFSNPLQ 424
Query: 708 KWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
I + + ES W PK L D++E+ GA FVDS VV
Sbjct: 425 SQITHYAEEIQAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRVV 480
>gi|80979111|gb|ABB54758.1| Dicer-2 [Drosophila simulans]
Length = 1564
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1187 GEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNR 1246
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHS 535
L D +P + T F P+ +P S G + L D +
Sbjct: 1247 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLT 1306
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1307 LDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLE 1366
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P ++ L+
Sbjct: 1367 ALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLI 1426
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1427 NHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1486
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVD 715
++PG LTD+RSA VNN A V+H LH IL +++L + I+ V+
Sbjct: 1487 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|80979103|gb|ABB54754.1| Dicer-2 [Drosophila simulans]
Length = 1537
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1187 GEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNR 1246
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHS 535
L D +P + T F P+ +P S G + L D +
Sbjct: 1247 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLT 1306
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1307 LDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLE 1366
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P ++ L+
Sbjct: 1367 ALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLI 1426
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1427 NHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1486
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVD 715
++PG LTD+RSA VNN A V+H LH IL +++L + I+ V+
Sbjct: 1487 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|80979113|gb|ABB54759.1| Dicer-2 [Drosophila simulans]
Length = 1565
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1187 GEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNR 1246
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHS 535
L D +P + T F P+ +P S G + L D +
Sbjct: 1247 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLT 1306
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1307 LDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLE 1366
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P ++ L+
Sbjct: 1367 ALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLI 1426
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1427 NHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1486
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVD 715
++PG LTD+RSA VNN A V+H LH IL +++L + I+ V+
Sbjct: 1487 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|80979107|gb|ABB54756.1| Dicer-2 [Drosophila simulans]
Length = 1567
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 152/350 (43%), Gaps = 69/350 (19%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN
Sbjct: 1187 GEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNR 1246
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNS-------------------GSYELNDHS 535
L D +P + T F P+ +P S G + L D +
Sbjct: 1247 NLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLA 1306
Query: 536 LFNERKI-----------------------------------YVTGRKKVKSKTVADVVE 560
L +E + + G + +K +AD +E
Sbjct: 1307 LDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLE 1366
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAER---------------LV 605
AL+G + G L+ I ++ P ++ L+
Sbjct: 1367 ALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLI 1426
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1427 NHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENN 1486
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVD 715
++PG LTD+RSA VNN A V+H LH IL +++L + I+ V+
Sbjct: 1487 TKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|340960215|gb|EGS21396.1| hypothetical protein CTHT_0032530 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1596
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 197/467 (42%), Gaps = 90/467 (19%)
Query: 378 ELPPELCRIIMGPMSLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQ 428
+L P+ C +++ P+ +S YSF P+I+HR++S L+A LD C +
Sbjct: 1027 DLEPKQCFLVLEPLRISPLPAKTAMMAYSF---PAIIHRIESNLIA-------LDACRLV 1076
Query: 429 NVTIPTSKVLEAITTKKCQEGFH--------------LESLETLGDSFLKYAASQQLFKT 474
+ I LEA+T G H E LE LGD FLK A + +F
Sbjct: 1077 GLDIRPDLALEALTKDSDNTGEHDAEQISFQPGMGNNYERLEFLGDCFLKMATTIAIFTL 1136
Query: 475 YQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDH 534
+ E V++ +I N L + KL +IR+ F N S+ N+
Sbjct: 1137 IPDKEEFEYHVERMLLICNRNLFNNALEFKLEEYIRSMAF----------NRHSWYPNNL 1186
Query: 535 SLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV--- 591
+L + + I + K++ADV EALIGA L TG + G ++ + V
Sbjct: 1187 TLKSGKTIQPRRTHLLADKSIADVCEALIGAALLTGQDRAGSTAPEQGAFDLAIRAVSTL 1246
Query: 592 --------------------PYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHG 631
P + + ++ L Y+FR P LL A H
Sbjct: 1247 VKSPRHSMSSYSEYYSLYTPPAWQTAPCSSAQVDMAARFACRLGYTFRHPRLLRSAFQHP 1306
Query: 632 SY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
+Y + +P YQRLEFLGDA+LD I +L+ ++P P LT+ + A V+N
Sbjct: 1307 TYPSVYEHLP-SYQRLEFLGDALLDMAIVEWLFARFPGADPQWLTEHKMAMVSNQFLGCL 1365
Query: 690 SVKHGLHKHILHASQELYKWINITVDSFERLSL------------ESTFG---WESETSF 734
G HK+I S ++ K + V E L E + W + +
Sbjct: 1366 GFMLGFHKNIACCSPQVGKDLARYVAEMEEALLAAKEDAVRAGKTEDDWARDFWLNCSRP 1425
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP--ETMRL 779
PK L D++E+ GA+FVDSG N F +R LE I P E MRL
Sbjct: 1426 PKCLPDVVEAYVGAVFVDSGYN----FGEVRAFLERHIRPFFEDMRL 1468
>gi|349603393|gb|AEP99241.1| Endoribonuclease Dicer-like protein, partial [Equus caballus]
Length = 223
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 124/228 (54%), Gaps = 28/228 (12%)
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+
Sbjct: 1 CYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK 60
Query: 701 HASQELYKWINITVDSFERLSLEST--FGWESE-------------TSFPKALGDIIESL 745
S EL+ +D F + LE G +SE PKA+GDI ESL
Sbjct: 61 AVSPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESL 116
Query: 746 SGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAPR 803
+GAI++DSG + E+V++ P++ P+I + + P REL E + + K + A R
Sbjct: 117 AGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAER 173
Query: 804 I-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
+GK VTVEV G K AK A++ L+SLKA+ P
Sbjct: 174 TYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 218
>gi|225563402|gb|EEH11681.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1436
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 196/462 (42%), Gaps = 74/462 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ S F PSI+H ++ LLA L +L S V+
Sbjct: 878 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLLAEELNKTILRPV---AFTDLSLVIT 932
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI+ +E + + +E LGDS LK+ + QL HEGLLS KD ++SN L
Sbjct: 933 AISASVAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSYA 992
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L FI + F W P + DH E+ + ++++ +KT+ADVV
Sbjct: 993 AIETGLDKFILLDVFTGAKWRPPCN-------KDHLESEEQDV---PQREMSTKTLADVV 1042
Query: 560 EALIGAFLSTGG----ENVGLIFLDRIGIK--VDFVNVPYERQFQVQAERLVN-VRHLES 612
EAL+ A GG E IFL + D VN Y + L + + +ES
Sbjct: 1043 EALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDRVNALYSSVPEAYENTLTSWFQEVES 1102
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N T
Sbjct: 1103 LVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVYHLFNAPRTF 1157
Query: 669 SPGDLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHILHA 702
D+ MR+A N D A L++ K L +++ H
Sbjct: 1158 PHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTTLTTHKVSLWQYMRHG 1217
Query: 703 -SQELYKWINITVDSFERLSLESTFGWESETSFP----------KALGDIIESLSGAIFV 751
S EL T + +E L + + E ++P K D+IES+ GAIF+
Sbjct: 1218 TSWELTAAQQQTANQYETLQADISEALEGSHTYPWTLLSRLHAQKFFSDLIESVLGAIFI 1277
Query: 752 DS-----GCNKEVVFESIRPLLEPMITPETMR-LQPARELNE 787
DS C + + L M+ E M + P + L E
Sbjct: 1278 DSHGSLDACTAFLERIGLMKFLRRMLVDEDMDFMHPKQRLGE 1319
>gi|195023643|ref|XP_001985724.1| GH20958 [Drosophila grimshawi]
gi|193901724|gb|EDW00591.1| GH20958 [Drosophila grimshawi]
Length = 1713
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 135/538 (25%), Positives = 209/538 (38%), Gaps = 137/538 (25%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
+ L AIT + F +E E LGD FLK +A+ L Y +EG L+ K ++SN
Sbjct: 1182 GEFLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLASKYPKWNEGTLTQVKSTLVSNR 1241
Query: 495 ALCKLGCDHKLPGFIRTEPFDPK----------------MWMIPGDNS---GSYELNDHS 535
L D +P I F PK +W D + G + L + +
Sbjct: 1242 NLLYCIRDTDIPSRICFTLFTPKYFWLPPCLSLPQNVQQLWQQHPDKAALVGPHNLRNLT 1301
Query: 536 L-----------------------------------FNERKIYVTGRKKVKSKTVADVVE 560
+ F+ + G+ K+ +K +AD +E
Sbjct: 1302 MSEEEVFGNGKCAESTYNSFLDSCRANQQTHNAGMDFSSEVDFCVGQVKMPNKVLADTLE 1361
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQA---------------ERLV 605
AL+G + G G L+ GI + P + +Q E L+
Sbjct: 1362 ALLGVIIKNYGLQHGFRMLEYFGICKPDIGKPLTQLLDLQLGSTQLRTNITKREVDEFLI 1421
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N LE L Y+FRD + L++ALTH S + CYQ LEF+GDA+LD+LI+ Y++
Sbjct: 1422 NHSALEHNLGYTFRDRAYLLQALTHPSNPTNRLTGCYQELEFVGDAILDFLISAYIFEHK 1481
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI----------NITVD 715
++PG LTD+RSA VNN A V+H +H IL + L I N V
Sbjct: 1482 TRMTPGQLTDLRSALVNNTTLACICVRHRIHFFILAENAMLSDSIQNFVRFQETQNHRVT 1541
Query: 716 SFERLSLEST---------------------------------------FGWESETSFPK 736
+ R+ +E + + + PK
Sbjct: 1542 NQVRILMEESDLMPGPLDSDDELEMAEADEQQASQPAITADTKKPEVGEYNISTNVDVPK 1601
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQPARELNEYCQKHHF 794
LGD++E+L AI++D + ++ + L EP + + L P R+LN+ H
Sbjct: 1602 TLGDVLEALIAAIYLDCR-DLNTTWQVVYKLFEPELLEFSRNVPLNPIRQLND-----HK 1655
Query: 795 SMKKTVAPRINGKAAV-----------TVEVHANGTLFKHTHADADKETAKKVASKEV 841
S K + + K V T++V+ G+ K A K +K+A E
Sbjct: 1656 SAKPIYSAPVTDKNQVMVTCQFICMEKTIKVYGFGSNGKQAKLSAAKHALQKIAKCEA 1713
>gi|403179645|ref|XP_003337958.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165150|gb|EFP93539.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 200/424 (47%), Gaps = 50/424 (11%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
LP +LC+ P ++ + F+++PS+ L + A L M LD M +P + +
Sbjct: 893 LPLKLCQGTHIPRTI--WKVFSYLPSLTRLLHDSIQATAL-FMRLDFPM--TLLP--RGI 945
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
+A+T + ++LET+GD+FLK A S ++ ++ EG +S + + + N L +
Sbjct: 946 QALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYLSHLRKGEGDMSHVRSKSVDNDYLRR 1005
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
LP I + F + G EL + + + V + ++DV
Sbjct: 1006 KAIQANLPSSILGQRFRTDRFRDAQTEDGK-ELPNGNF----------SRNVPRRVLSDV 1054
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKVDFV---NVPY-ERQFQVQAER----------L 604
VEAL+GA TGG +GL +IG +D P+ ER + E L
Sbjct: 1055 VEALLGAGFLTGGIELGL----KIGTALDLCFGGTTPWNERTLNIAFEGTAHDKLASSIL 1110
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTH---GSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+ + LE + Y F++ LLV+ALTH S+M CY+R E+LGDAV+D I +
Sbjct: 1111 LKCQALEEKIGYVFKEKLLLVQALTHRSANSFMT----NCYEREEWLGDAVVDMWIVQHA 1166
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFERL 720
Y ++ + +LT R+ V+N ++K GLHK I+H S+ + + + E
Sbjct: 1167 YKRFDNATAEELTLARAKLVSNGSLGFLAIKKLGLHKVIMHKSESFEQACVEAIKAIEPF 1226
Query: 721 SLESTFGWESETSF-----PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
+ F E F PK L D++E++ GA+F+DS + V+ +I + E +TP
Sbjct: 1227 TSIEEFFSNLENLFVVFDPPKILNDVLEAIVGAVFIDSRFDLPTVYRTIDKIFED-VTPG 1285
Query: 776 TMRL 779
R+
Sbjct: 1286 LSRI 1289
>gi|402079303|gb|EJT74568.1| dicer-like protein 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1607
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 214/503 (42%), Gaps = 97/503 (19%)
Query: 379 LPPELCRIIMGPMSLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 430
+P C +++ + +S Y+F P+I++RL++ L+A+N N+L +
Sbjct: 1058 VPQRTCFLVLETLQISRLPVEVVSMAYNF---PAIIYRLENNLIALNCCNLL------GL 1108
Query: 431 TIPTSKVLEAITTKKCQE--------------GFHLESLETLGDSFLKYAASQQLFKTYQ 476
+I LEA+T G + E LE LGD FLK A + LF T
Sbjct: 1109 SIRPDLALEAVTKDSDNSDEPDEAPVNFQGGMGKNYERLEFLGDCFLKMATTIALF-TLM 1167
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
E V++ I N L + D L +IR++ F+ + W G +L
Sbjct: 1168 AGDEFEYHVERMTDICNKNLLNVALDMGLQKYIRSKSFNRRTWYPSG----------LTL 1217
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN-------VGLIFLDRIG------ 583
+++ + K++ADV EALIGA TG E + L R
Sbjct: 1218 LKGKRLEADATHSLGDKSIADVCEALIGAAYLTGRERNSFDMAVKAVTLLTRSQTHTMKS 1277
Query: 584 --------IKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-- 633
+K ++ VP R +L R ++ + Y F+D LL A H SY
Sbjct: 1278 FAEYRAAYVKPEWQTVPASRL------QLELARRIKEKMGYEFKDARLLRSAFMHPSYPR 1331
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
+ IP YQRLEFLGDA+LD +L+ ++P P LT+ + A V+N Y +V+
Sbjct: 1332 VYENIP-SYQRLEFLGDALLDMTCIDHLFGRFPDRDPQWLTEHKMAMVSNQFYGCLAVEL 1390
Query: 694 GLHKHILHASQELYKWINITVDSF-------ERLSLE-----STFG---WESETSFPKAL 738
G H+H++ +L I VD E+ +++ + F W PK L
Sbjct: 1391 GFHRHVVCLKTQLQGQIADWVDRLGERRRRAEQAAVDAGRPAADFARNFWVDMEHPPKCL 1450
Query: 739 GDIIESLSGAIFVDSGCNKEVV----FESIRPLLEPMITPETMRL-QPARELN-----EY 788
D++E+ GA+FVD+G + V E +RP M +T P LN +
Sbjct: 1451 PDVLEAYVGALFVDAGYDYGAVEAFWAEHVRPWFADMAAYDTYSAHHPVTHLNSILVHQL 1510
Query: 789 CQKHHFSMKKTVAPRINGKAAVT 811
HH + + +A +G+A V
Sbjct: 1511 GCTHHRLLVREIADTASGEAVVA 1533
>gi|240247227|emb|CAX68236.1| dicer-1 [Blattella germanica]
Length = 2271
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 120/228 (52%), Gaps = 23/228 (10%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E + Y FRD S L+++LTH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 2018 FERRIRYKFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHS 2077
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES----- 724
PG LTD+RSA VNN +A +V++G HK+ H S L N VD F R+ E+
Sbjct: 2078 PGALTDLRSALVNNTIFASLAVRYGFHKYFRHLSPGL----NEVVDRFVRIQEENGHTIS 2133
Query: 725 ---------TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
+ PKALGD+ ES++GAIF+DSG + + V+ +++ I
Sbjct: 2134 EEYYLIEEEECEEAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRMMKSEIEQF 2193
Query: 776 TMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTL 820
+ + P REL E + F + +A + VTVEV GT
Sbjct: 2194 STNVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVEVFGKGTF 2239
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1727 SVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1786
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG + F+P W+ P
Sbjct: 1787 NLYRLGRRKVFGESMIATKFEPHDNWLPP 1815
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 302 QIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN-----GRRIFH 356
Q +Y+ + GHLN S F ++ T+ ++Y ++Y IQ+ ++ LL+ R F
Sbjct: 1167 QYFYVAEICGHLNPKSTFPGSEYK--TFDEYYFKKYNIQIQNSKQPLLDVDHTSARLNFL 1224
Query: 357 AQNYLSK------CRQEKQREPSKISFE----LPPELCRIIMGPMSLSTFYSFTFVPSIM 406
Y+++ E+ + + + E L PELC + P SL + +P I+
Sbjct: 1225 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRKAVCLPCIL 1282
Query: 407 HRLQSLLLAVNLK 419
+R+ +LLLA ++
Sbjct: 1283 YRINALLLADQIR 1295
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS++++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1726 PSVILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1782
Query: 681 VNN 683
V+N
Sbjct: 1783 VSN 1785
>gi|212529276|ref|XP_002144795.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210074193|gb|EEA28280.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1497
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 186/405 (45%), Gaps = 42/405 (10%)
Query: 399 FTFVPSIMHRLQSLLLAVNLKNML-----LDHCMQNVTIPTSKV----LEAITTKKCQEG 449
F F P+I+ R+ S L+A ++L L + ++ VT + LE I ++ G
Sbjct: 988 FAF-PAIITRIDSYLVAHECASLLGLEIQLGYALEAVTKDSDNTEEHRLEQIQFQRGM-G 1045
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
+ E LE LGD FLK A S LF N E L V + +I N L + K+ +I
Sbjct: 1046 KNYERLEFLGDCFLKMATSISLFVGSPNDQEFDLHVNRMTLICNRNLFNTAKERKIYEYI 1105
Query: 510 RTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLST 569
R++ F + W G + N+ T + KT+ADV EALIGA L +
Sbjct: 1106 RSKGFSRRNWYPEGMKLLRGKANEDKA-------STHTHGLGEKTIADVCEALIGASLLS 1158
Query: 570 GGE----NVGLIFLDRIGIKVDFVNVP----YERQFQVQAERLVNVRHLES--------L 613
GG ++ + + R+ + D NV Y + + + ++ E
Sbjct: 1159 GGPVNRFDMAVKAVTRL-VNSDLHNVESWAGYSSHYSLPSYQIKEANGFEKDLANQIDKK 1217
Query: 614 LNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L Y F+ P LL A TH SY I CYQRLEFLGD++LD + LY ++P P
Sbjct: 1218 LGYRFKYPRLLRSAFTHPSYPTAWSIVPCYQRLEFLGDSLLDMVCIENLYERFPDRDPQW 1277
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL--SLESTFGWES 730
LT+ + A V+N +V+ LH H+ + S L I V+ + S +S W
Sbjct: 1278 LTEHKMAMVSNKFLGSLAVRLDLHTHLQYFSNPLQGRIAQAVEDAQLAYESHQSVDFWIM 1337
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVV----FESIRPLLEPM 771
PK L D++E+ GAIFVDSG + V+ + I+P E M
Sbjct: 1338 IEDPPKCLSDMVEAYLGAIFVDSGFDFGVIESFYAKHIKPYFEDM 1382
>gi|347440705|emb|CCD33626.1| hypothetical protein [Botryotinia fuckeliana]
Length = 984
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 187/421 (44%), Gaps = 68/421 (16%)
Query: 384 CRIIMGPMSLS----TFYSFTFV-PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C II+ P+ +S T + ++ P+I+HR++S L+A+ ++L ++ I L
Sbjct: 437 CFIILEPLKVSPLPTTVVAMAYLLPAIIHRVESYLIALEATDLL------HLDIRPDLAL 490
Query: 439 EAITTKKCQEGFH--------------LESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA+T G H E LE LGD FLK S L+ + E
Sbjct: 491 EAVTKDSDNSGEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYH 550
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + +I N L +L +IR+ F+ + W G L +
Sbjct: 551 VDRMCLICNKNLFNTALKLELYKYIRSAAFNRRAWYPEGP----------ELLRGKTATA 600
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVP 592
K+ K+VADV EA+IGA L + E+ + R +V D+ +
Sbjct: 601 PNTHKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNSDNHNAVVWSDYYKLY 660
Query: 593 YERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML--PEIPRCYQRLEF 647
+ ++Q A ++ R +E Y F+ P LL A H +Y+ +IP CYQRLEF
Sbjct: 661 EKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLFIYEQIP-CYQRLEF 719
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGD++LD +L++ +PT P LT+ + A V+N VK G HKH+L ++
Sbjct: 720 LGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLGFHKHLLTLDSQVQ 779
Query: 708 KWI-NITVDSFERL-----------SLESTFG---WESETSFPKALGDIIESLSGAIFVD 752
K I + + D E L +E + W + PK L DI+E+ GAIFVD
Sbjct: 780 KMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWIAVRQPPKCLPDIVEAFIGAIFVD 839
Query: 753 S 753
S
Sbjct: 840 S 840
>gi|158706448|sp|Q0UI93.2|DCL1_PHANO RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1522
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 192/774 (24%), Positives = 316/774 (40%), Gaps = 97/774 (12%)
Query: 47 ICTLYLPNNCPIQTVIAQG-NIKTL-KQTACLEACKKLHQIGALTDNLLPDV---VVEEH 101
+C + LP +CPI +++ Q + KT+ K +A + C +L + L + LLP + +
Sbjct: 643 VCEVILPEHCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLPTISKYLPAMR 702
Query: 102 DAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRT 161
+A +E + + P Q + H +I+ + D P + + R
Sbjct: 703 NALLAVSEKKKGNYAMVIKPTFWKQDRDTVPESLHLTIIDADRGL--DRPHQPLAMLTRR 760
Query: 162 ELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLN 221
++ L R V+ I LTP+ + + RF + +F
Sbjct: 761 PF-PQLPSFPIYLTDCRPSNIVSQSLHIPISLTPELLEMFTRFTLRIF-----------E 808
Query: 222 EILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTK 281
+I ++ D ++ Y +LP E + V S+S P ++ + N +
Sbjct: 809 DIYNKVYDYDVSKMSYWMLPVIEHRV--ASVRSMSNPQEV--LDMDQIRKVYNEPFWKWS 864
Query: 282 SGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLN-----------ANSLFTRN--DGGAIT 328
+I V + G+ YY + HL N F +N D
Sbjct: 865 PQSRTDDLIDRYFVDPMNGGRRYYSDRLAPHLKPQDPVPANVPRQNHKFMKNILDFSDSK 924
Query: 329 YKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIM 388
+ K + I + +L +I +N+L+ ++++E + + + PE I
Sbjct: 925 WMKSRD----ITRWHQDQPVLQVEKIPFRRNHLANVEDKEKKELANLETYICPEPLHI-- 978
Query: 389 GPMSLST-FYSFTFV-PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK-- 444
+L+T F +V P+I+HR +S L+A++ ++L ++ + + LEA+T
Sbjct: 979 --SNLATPFVVMCYVLPAIIHRFESYLIALDACDVL------DLKVSPALALEALTKDSD 1030
Query: 445 ------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
K G + E LE LGD FLK A S +F +E V++ ++
Sbjct: 1031 NSEEHGEEKINFKSGMGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLC 1090
Query: 493 NAALCKLGC-DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVK 551
N L + KL ++RT+ F + W G L L + ++ +
Sbjct: 1091 NQNLMETAVGKKKLYKYVRTDAFSRRNWY----PEGLKLLRGKGLKKTEEDWLNVTHNLG 1146
Query: 552 SKTVADVVEALIGA-FLS--TGG--------ENVGLIFL-----DRIGIK-VDFVNVPYE 594
K+VADV EA IGA F+ GG E V + L D + K D+ +
Sbjct: 1147 DKSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLMEKWTDYYAAYTK 1206
Query: 595 RQFQ---VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLG 649
++Q A +L +E Y FR P LL A H S +M IP YQRLEFLG
Sbjct: 1207 PKYQTAGATATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPSQPFMWENIP-SYQRLEFLG 1265
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
D++LD ++L+ KYP P LT+ ++ V+N VK G H H+ + L
Sbjct: 1266 DSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHMKQNTAILSSQ 1325
Query: 710 INITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
I V E E+ W S + PK L D+IE+ AIFVDS + VV
Sbjct: 1326 IRDYVYEVEEAEREANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDFNVV 1379
>gi|240276002|gb|EER39515.1| dicer-like protein [Ajellomyces capsulatus H143]
Length = 800
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 194/462 (41%), Gaps = 74/462 (16%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ S F PSI+H ++ LLA L +L S V+
Sbjct: 242 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLLAEELNKTILRPV---AFTDLSLVIT 296
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI+ +E + + +E LGDS LK+ + QL HEGLLS KD ++SN L
Sbjct: 297 AISASAAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSYA 356
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
+ L FI + F W P + DH E+ + ++++ +KT+ADVV
Sbjct: 357 AIETGLDKFILLDVFTGAKWRPPCN-------KDHLESEEQGV---PQREMSTKTLADVV 406
Query: 560 EALIGAFLSTGG----ENVGLIFLDRIGIK--VDFVNVPYERQFQVQAERLVN-VRHLES 612
EAL+ A GG E IFL + D VN Y + L + + +ES
Sbjct: 407 EALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDRVNALYSSVPEAYENTLTSWFQEVES 466
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N L
Sbjct: 467 LVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVYHLFNAPRIL 521
Query: 669 SPGDLTDMRSASVNND-----CYALSS-----------------------------VKHG 694
D+ MR+A N D C +S+ ++HG
Sbjct: 522 PHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTKLTTRKVSLWQYMRHG 581
Query: 695 LHKHILHASQELY-KWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFV 751
+ A Q+ ++ + D E L T+ W S K D+IES+ GAIF+
Sbjct: 582 TSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSRLHAQKFFSDLIESVLGAIFI 641
Query: 752 DS-----GCNKEVVFESIRPLLEPMITPETMRL-QPARELNE 787
DS C + + L M+ E M L P + L +
Sbjct: 642 DSHGSLDACTAFLERIGLMKFLRRMLVDEDMDLMHPKQRLGQ 683
>gi|67525463|ref|XP_660793.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
gi|40743766|gb|EAA62953.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
Length = 1726
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 203/489 (41%), Gaps = 87/489 (17%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQRE------PSKISFELPPELCRIIMG 389
RYG L F + L +G Y SK R QR+ P++ P RI+
Sbjct: 1080 RYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQRQTLAKKRPAEDEILGSPTKKRILSA 1139
Query: 390 --------PMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEA 440
P S + F F +P I+ RL++ L+A L + +L D Q++ V+ A
Sbjct: 1140 SHCTIDRLPASETVFGRF--IPVILDRLEAALVATRLCETVLRDIQFQDL----RHVITA 1193
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
IT Q + E GDS LK+ + LF N HEG L+ ++ NA L +
Sbjct: 1194 ITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAA 1253
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L +I + F P+ W P L +E+ + + +K +ADVVE
Sbjct: 1254 LDQGLDAYIISNRFTPRKWSAP-------------LISEKLYASASTRSMSAKVLADVVE 1300
Query: 561 ALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAER--LVNVRHLESLL 614
ALIGA GG ++ + FL I + + P ++ L+ +LE+ +
Sbjct: 1301 ALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPMSKDHKKPHLIQQENLENHI 1360
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
Y+F+D +LL+EALTH S + YQRLEFLGDAVLD LI + + G++T
Sbjct: 1361 GYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMT 1420
Query: 675 DMRSASVNNDCYAL--------------SSVKHGLHKHILHASQ-----ELYKWINITVD 715
++ A VN A S+ G S LY ++ +
Sbjct: 1421 KIKHAIVNGHLLAFLCMQFKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRYSPS 1480
Query: 716 SFERLSLESTFG------------------WESETSFPKAL----------GDIIESLSG 747
L +E G + T++P +L D++ES+ G
Sbjct: 1481 RPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVESIIG 1540
Query: 748 AIFVDSGCN 756
AIFVDSG +
Sbjct: 1541 AIFVDSGGD 1549
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 604 LVNVRHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
LV R E++L + F+D ++ A+T L + P YQR EF GD+VL + + L+
Sbjct: 1169 LVATRLCETVLRDIQFQDLRHVITAIT---MPLAQAPTDYQRYEFFGDSVLKFTVAASLF 1225
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
P G LT+ A V N +++ GL +I+ KW + E+L
Sbjct: 1226 YNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRKWSAPLIS--EKLYA 1283
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
++ + + K L D++E+L GA ++D G +K
Sbjct: 1284 SAS----TRSMSAKVLADVVEALIGAAYIDGGLHK 1314
>gi|358383044|gb|EHK20713.1| hypothetical protein TRIVIDRAFT_171147, partial [Trichoderma virens
Gv29-8]
Length = 1373
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 198/450 (44%), Gaps = 78/450 (17%)
Query: 384 CRIIMGPMSLSTF----YSFTFV-PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C +I+ P+ +S S V P +++R+ S+L+A+ ++ ++ I + L
Sbjct: 834 CYVILEPLRVSPIPVDVVSIALVLPVVIYRVDSVLIALETCSLF------DLAICSDLAL 887
Query: 439 EAIT-----TKKCQE---------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA+T T++ E G + E LE LGD+FLK A + ++ + E
Sbjct: 888 EAVTKDSFNTEEHGEHQIDFQPGMGKNYERLEFLGDTFLKMATTISVYTIAPDADEFHYH 947
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + ++ N L + + +P +IRT+ FD + W Y N +L +
Sbjct: 948 VGRMMMLCNKNLFEHAVEKGMPAYIRTKAFDRRTW---------YPSN-MTLKRGKAART 997
Query: 545 TGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKV----------DFV---N 590
+ + K++ADV EALIGA ++++ EN+ + + D+
Sbjct: 998 ETKHCLSHKSIADVCEALIGAAYMTSTTENMDMAVKAVTAMVCSEHHTMLEYKDYFATFQ 1057
Query: 591 VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
VP V A + + V + + Y F+ L A H SY+ YQ+LEFLGD
Sbjct: 1058 VPKWHGNHVSAAQRLTVDKVAEITGYRFQCAPLARSAFRHPSYVFETNIPDYQQLEFLGD 1117
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
+LD + +L+ ++P P LT+ ++A V+N VK GLHKHIL A+ L I
Sbjct: 1118 GLLDMAVVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSALLGDI 1177
Query: 711 NITVDSFERL-------SLESTFGWESETSF------------------PKALGDIIESL 745
E+ S G+ S F PKAL D++E+L
Sbjct: 1178 GRYATQLEQAEEIARQKSQGGDLGYTSGGCFQAGAQPTPQDFWIEVPQPPKALADVVEAL 1237
Query: 746 SGAIFVDSGCNKEVVF----ESIRPLLEPM 771
GA+FVDSG + VV + I+P E M
Sbjct: 1238 VGAMFVDSGYSFSVVLNFFTKFIQPFFEDM 1267
>gi|451996502|gb|EMD88969.1| hypothetical protein COCHEDRAFT_1143131 [Cochliobolus heterostrophus
C5]
Length = 1426
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 186/404 (46%), Gaps = 51/404 (12%)
Query: 400 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV---LEAITTKKCQEGFHLESLE 456
+ PSI H+L++ ++A L+ +L Q+V I S + L A+T + + + LE
Sbjct: 921 SLFPSITHKLETYMVANTLRTTIL----QSVDIDVSHLPILLLALTPSATEGEENYQRLE 976
Query: 457 TLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP 516
LGD LK+ S L T+ EG+L+ KK +++SN L + L GFI + F
Sbjct: 977 FLGDCILKFITSLHLMATHLRMPEGMLTGKKGKLVSNGYLARAALAKGLDGFILYKRFTG 1036
Query: 517 KMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL 576
W P S + + ER SK +ADV+E+LIGA GG +
Sbjct: 1037 AKWK-PRYVSQMLSITNPPTKQER----------SSKLIADVIESLIGASYVVGGFSKAF 1085
Query: 577 IFLDRIGIKVDFVNVPYERQFQVQA----ERLVNVRHLESLLNYSFRDPSLLVEALTHGS 632
+ + +++ +P A + +V +E+L+ ++F + +LL+EALTH +
Sbjct: 1086 ACVKALLPLENWMPIPQANDTLYNAAPEQDSVVGAITVENLVGHAFNNKALLLEALTHPT 1145
Query: 633 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS--- 689
+ Y+R EFLGDAVLDY+++ LY+ P L + +R+A VN A S
Sbjct: 1146 FRGLNTFCSYEREEFLGDAVLDYIVSKRLYSHRPELPHYKMHGIRTAMVNASFLAYSMFE 1205
Query: 690 ----------------SVKHGLHKHILHASQELYKWINITVDSF--------ERLSLEST 725
+ + L + + S EL N+ + E L ++
Sbjct: 1206 TTVEEVFTNKETLQPEAHQKALWQFLRFTSHELVTSRNLAIQRHSEARIQIAEALQHDAR 1265
Query: 726 FGWE--SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
F W S T PK L DI+ES+ GA+++DS + V E +R L
Sbjct: 1266 FPWHALSLTDPPKFLSDIVESMIGALYIDSHGSLPVCEEFVRRL 1309
>gi|302422698|ref|XP_003009179.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261352325|gb|EEY14753.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1510
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 188/434 (43%), Gaps = 109/434 (25%)
Query: 383 LCRIIMGPMSLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIP 433
+C +I+ P+ +ST Y+F P+I+HR++S ++A LD C M N+ +
Sbjct: 1030 ICYVILQPLQISTLPVKVVAMAYNF---PAIIHRIESNMIA-------LDACRMLNLQVR 1079
Query: 434 TSKVLEAITT------KKCQE--------GFHLESLETLGDSFLKYAASQQLFKTYQNHH 479
LEA+T ++ QE G + E LE LGD FLK A + LF + +
Sbjct: 1080 PDLALEAMTKDSSNSDEQDQEKIDFQAGMGNNYERLEFLGDCFLKMATTIALFTRIPDSN 1139
Query: 480 EGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG--DNSGSYE--LNDHS 535
E V++ +I N L + L +IR++ FD + W G +G + N HS
Sbjct: 1140 EFEYHVERMLLICNQNLFNVALKKNLQEYIRSKQFDRRSWYPQGLKQKAGKAQGAQNSHS 1199
Query: 536 LFNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYE 594
L + K++ADV EA+IGA +LS E
Sbjct: 1200 LAD--------------KSIADVCEAMIGASYLSYADEGN-------------------- 1225
Query: 595 RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAV 652
+ +F+ P+LL A H SY +P YQRLEFLGDA+
Sbjct: 1226 -------------------FDMAFKSPALLRSAFKHPSYPRQFESVPN-YQRLEFLGDAL 1265
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI 712
LD + +L+ K+P P LT+ + A V+N SV+ G ++ +LH S + I
Sbjct: 1266 LDMVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRRVLHFSGVMANQIKD 1325
Query: 713 TVDSFERL-----------SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV- 760
VD+ + S W + PK L D++E+ GAIFVDSG N V
Sbjct: 1326 YVDALTHARQEAEAAAQISGVISQDYWLNVQHPPKFLSDVVEAYIGAIFVDSGYNYSQVQ 1385
Query: 761 --FES-IRPLLEPM 771
FE IRP M
Sbjct: 1386 AFFEKHIRPFFADM 1399
>gi|358332040|dbj|GAA50766.1| dicer-like protein 1 [Clonorchis sinensis]
Length = 774
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 179/382 (46%), Gaps = 46/382 (12%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ-NHHEGLLSVKKDRIISN 493
+++L+A T + +LE LE +GDS L+ + Q+++ E L+ K+ ++SN
Sbjct: 377 TELLKATTLLGAADSVNLERLEFIGDSLLQLITTLQVYQNSSLQADEQQLTNKRSVLVSN 436
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL-NDHSLFNERKIYVTGRKKVKS 552
A L + + + T PFD + IP Y L + + ++ +IYV K+
Sbjct: 437 ANLYSIVVREQWYRYCTTRPFDIRDLFIPP----CYTLKSQYQEPDDPRIYV----KLTD 488
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIK-VDFVNVPYERQ-------FQ------ 598
K++AD++EAL+G FL G L R GI +D +N + FQ
Sbjct: 489 KSLADMIEALLGCFLQCIGIRGACGLLQRFGISFMDCINDTFNSSASMWRCFFQDAVCLT 548
Query: 599 ----------------VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY 642
+AE + L+ L Y F++ +LL EA TH SY + CY
Sbjct: 549 NQLSKLTIGSARGDEATKAELDAGISILQGRLGYVFKNQALLHEARTHSSYSSLKPTVCY 608
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA 702
QRLEFLGDAVL Y+++ L+ ++P PG LT+ RS VNN A V LH I H
Sbjct: 609 QRLEFLGDAVLGYVVSNDLFKRFPDYDPGMLTNHRSLIVNNLVLARVLVDLKLHDGIRHN 668
Query: 703 SQELYKWIN----ITVDSFERLS-LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
L ++ + + LS L S K LGD+ ESL GA+FVD+ +
Sbjct: 669 IPSLPSMVDKLRSVRLADVTSLSELREKIQTNITASPMKILGDVFESLIGAVFVDTNGDL 728
Query: 758 EVVFESIRPLL-EPMITPETMR 778
+V+ + LL + ++T E R
Sbjct: 729 QVIQTIVHRLLGKVLMTRERAR 750
>gi|347835506|emb|CCD50078.1| similar to dicer-like protein 2 [Botryotinia fuckeliana]
Length = 1378
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 206/448 (45%), Gaps = 68/448 (15%)
Query: 353 RIFHAQNYLSKCRQEKQREPSK-ISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQS 411
++ ++L K + EK +K S LP C + P LS F +PSI H ++
Sbjct: 825 KVSRRADFLHKVQNEKPSSFTKQFSSVLPASTCVQDVMPAQLSRFG--MMIPSITHHIEV 882
Query: 412 LLLAVNLKNMLLDHCMQNVTIPTSKVLE-AITTKKCQEGFHLESLETLGDSFLKYAASQQ 470
L+ L +L +++ I +++ AIT + + LE LGDS LK S Q
Sbjct: 883 QLVVDRLSRTIL----KDLEISDQSLIQTAITHASYSLDSNYQRLEFLGDSILKLCTSVQ 938
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYE 530
L + + HEG LS KDRI+SN+ + + L +I T+ F W
Sbjct: 939 LVAEHLDWHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKW--------RPM 990
Query: 531 LNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN 590
D + E+K +++ SK ++DVVEALIGA + GG L L ++++
Sbjct: 991 YVDDLVVTEQKT-----REMSSKILSDVVEALIGACMVDGGIPKALKSLQLFFPELNW-- 1043
Query: 591 VPYE-RQ---FQVQAERL---VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ 643
+P E RQ +Q A L + +R +E +L Y+F SLLVEA+TH SY + +
Sbjct: 1044 LPLETRQMTLYQQAANDLHLPIALRPVEQILAYTFTKKSLLVEAMTHPSYT--SGTQSLE 1101
Query: 644 RLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL--- 700
RLEFLGD++LD +I +++ LS + +RSA VN D A ++ + +++
Sbjct: 1102 RLEFLGDSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNADFLAFLCMEMSIDQNVTNLT 1161
Query: 701 ----HASQELYKWINITVDSFERLS----------------------LES-----TFGWE 729
H E + +++ SF R S LE+ TF W
Sbjct: 1162 EGKNHRIHETHSRRRVSLVSFLRHSSVRLSIYQKEALSRHAELRDQILEAIYTGDTFPWA 1221
Query: 730 --SETSFPKALGDIIESLSGAIFVDSGC 755
S K D+IESL GA+++DSG
Sbjct: 1222 LLSRLDARKFFSDMIESLLGAVWIDSGS 1249
>gi|224064945|ref|XP_002301611.1| predicted protein [Populus trichocarpa]
gi|222843337|gb|EEE80884.1| predicted protein [Populus trichocarpa]
Length = 303
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 116/196 (59%), Gaps = 10/196 (5%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITVYL 661
+ ++ +E +L+Y F+ LL EALTH S+ +C Y+RLE++GD+VL+ L T
Sbjct: 51 VTDLDEVEEILHYKFKSKKLLEEALTHASFS----DQCFSYERLEYVGDSVLNLLFTKEQ 106
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
Y YP L PG LT +RSA+V+ + A ++KH LH+++ H L + I F +
Sbjct: 107 YFLYPDLPPGPLTRLRSANVDTEKLARVAIKHKLHRYLRHKMPLLEEQIR----EFSQAI 162
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQP 781
L+ PKAL DI+E+ GA+F+DS + +VV++ + LLEP+I+ ET+++ P
Sbjct: 163 LDYPLHSNGLVETPKALADIVEAAIGAVFIDSNFSIDVVWKIFKDLLEPIISQETLKVHP 222
Query: 782 ARELNEYCQKHHFSMK 797
EL E CQK + +K
Sbjct: 223 VTELYEVCQKRNLKVK 238
>gi|259485853|tpe|CBF83228.1| TPA: Dicer-like protein 2 [Includes Endoribonuclease dcl2(EC
3.1.26.-);ATP-dependent helicase dcl2(EC 3.6.1.-)]
[Source:UniProtKB/Swiss-Prot;Acc:P0C5H7] [Aspergillus
nidulans FGSC A4]
Length = 1269
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 202/490 (41%), Gaps = 89/490 (18%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQRE---------------PSKISFELP 380
RYG L F + L +G Y SK R QR+ P+K L
Sbjct: 623 RYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQRQTLAKKRPAEDEILGSPTKKRI-LS 681
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLE 439
C I P S + F F +P I+ RL++ L+A L + +L D Q++ V+
Sbjct: 682 ASHCTIDRLPASETVFGRF--IPVILDRLEAALVATRLCETVLRDIQFQDL----RHVIT 735
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AIT Q + E GDS LK+ + LF N HEG L+ ++ NA L +
Sbjct: 736 AITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRA 795
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
D L +I + F P+ W P L +E+ + + +K +ADVV
Sbjct: 796 ALDQGLDAYIISNRFTPRKWSAP-------------LISEKLYASASTRSMSAKVLADVV 842
Query: 560 EALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAER--LVNVRHLESL 613
EALIGA GG ++ + FL I + + P ++ L+ +LE+
Sbjct: 843 EALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPMSKDHKKPHLIQQENLENH 902
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
+ Y+F+D +LL+EALTH S + YQRLEFLGDAVLD LI + + G++
Sbjct: 903 IGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEM 962
Query: 674 TDMRSASVNNDCYAL--------------SSVKHGLHKHILHASQ-----ELYKWINITV 714
T ++ A VN A S+ G S LY ++ +
Sbjct: 963 TKIKHAIVNGHLLAFLCMQFKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRYSP 1022
Query: 715 DSFERLSLESTFG------------------WESETSFPKAL----------GDIIESLS 746
L +E G + T++P +L D++ES+
Sbjct: 1023 SRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVESII 1082
Query: 747 GAIFVDSGCN 756
GAIFVDSG +
Sbjct: 1083 GAIFVDSGGD 1092
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 604 LVNVRHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
LV R E++L + F+D ++ A+T L + P YQR EF GD+VL + + L+
Sbjct: 712 LVATRLCETVLRDIQFQDLRHVITAITMP---LAQAPTDYQRYEFFGDSVLKFTVAASLF 768
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
P G LT+ A V N +++ GL +I+ KW + E+L
Sbjct: 769 YNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRKWSAPLIS--EKLYA 826
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
++ + + K L D++E+L GA ++D G +K
Sbjct: 827 SAS----TRSMSAKVLADVVEALIGAAYIDGGLHK 857
>gi|170099920|ref|XP_001881178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643857|gb|EDR08108.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1469
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 215/483 (44%), Gaps = 91/483 (18%)
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKK 445
+++ P+ Y+F +P+++ + L +L+ + +IP ++ AIT
Sbjct: 923 VLLSPVDAD--YAF-LLPALLRSIGMLTTTHSLQKAVFTPASPISSIPMQLLMVAITAPS 979
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
E + + LETLGD+ LK+ QL Y HEG L+ KKD +SN L K +L
Sbjct: 980 SNERKNYQRLETLGDTVLKFVCGIQLLSEYPLWHEGYLTRKKDHAVSNVRLAKENVAREL 1039
Query: 506 PGFIRTEPFDPKMW----MIPGDNSGSYE---LNDHSLFNERKIYVTGRKKVKSKTVADV 558
+I + K W + D + E + + ++K + + +K +ADV
Sbjct: 1040 YRWIIRDMLLGKKWKPHYLSKKDAETTPEPDKMTVEEVNTKKKKKKGKSQSLSTKVLADV 1099
Query: 559 VEALIGAFLSTGGENVG---LIFLDRIGIKV---------------DFVNVPYERQFQVQ 600
VE++IGA GG ++G + F D +G+K D PY Q
Sbjct: 1100 VESIIGAAYLHGGFDLGYECIKFFD-LGLKWQPLPTRIEQLLSRARDSEETPYPHQ---- 1154
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE-IPRCYQRLEFLGDAVLDYLITV 659
LV+V ES+L Y+F LL+EALTH SY + Y+R+EFLGD++LD ++T
Sbjct: 1155 ---LVDV---ESMLGYTFNHKLLLIEALTHASYQQDQYTSSSYERMEFLGDSILDMIVTD 1208
Query: 660 YLYNKYP--TLSPGDLTDMRSASVNNDCYALSSVKHGLH--------------------K 697
YLY + P SPG + +SA VN A ++ LH
Sbjct: 1209 YLY-RAPGKEYSPGHMHLRKSAVVNAHFLAFICLRTCLHFDASMPRPSPDSQGDQGPVKI 1267
Query: 698 HILHASQELYKW----------INITVDSFERL---------SLES--TFGWESETSF-- 734
+ SQE+Y W ++ ++F R +LE F W + T
Sbjct: 1268 ELAPDSQEIYLWQCLLHSSPRVLDDQSNTFIRFRKCKAVIEKALEKGIIFPWAALTRLQA 1327
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRP-----LLEPMITPETMRLQPARELNEYC 789
PK L D++ESL GAIF+DS + + V +R +LE ++ + L P L+++
Sbjct: 1328 PKFLSDMVESLIGAIFLDSNGDMDCVKGVLRKTGIIQILERIVRDDVDILHPVSRLSDWA 1387
Query: 790 QKH 792
K+
Sbjct: 1388 SKN 1390
>gi|158706440|sp|P0C5H7.1|DCL2_EMENI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1429
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 202/490 (41%), Gaps = 89/490 (18%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQRE---------------PSKISFELP 380
RYG L F + L +G Y SK R QR+ P+K L
Sbjct: 783 RYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQRQTLAKKRPAEDEILGSPTKKRI-LS 841
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLE 439
C I P S + F F +P I+ RL++ L+A L + +L D Q++ V+
Sbjct: 842 ASHCTIDRLPASETVFGRF--IPVILDRLEAALVATRLCETVLRDIQFQDL----RHVIT 895
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AIT Q + E GDS LK+ + LF N HEG L+ ++ NA L +
Sbjct: 896 AITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRA 955
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
D L +I + F P+ W P L +E+ + + +K +ADVV
Sbjct: 956 ALDQGLDAYIISNRFTPRKWSAP-------------LISEKLYASASTRSMSAKVLADVV 1002
Query: 560 EALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAER--LVNVRHLESL 613
EALIGA GG ++ + FL I + + P ++ L+ +LE+
Sbjct: 1003 EALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPMSKDHKKPHLIQQENLENH 1062
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
+ Y+F+D +LL+EALTH S + YQRLEFLGDAVLD LI + + G++
Sbjct: 1063 IGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEM 1122
Query: 674 TDMRSASVNNDCYAL--------------SSVKHGLHKHILHASQ-----ELYKWINITV 714
T ++ A VN A S+ G S LY ++ +
Sbjct: 1123 TKIKHAIVNGHLLAFLCMQFKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRYSP 1182
Query: 715 DSFERLSLESTFG------------------WESETSFPKAL----------GDIIESLS 746
L +E G + T++P +L D++ES+
Sbjct: 1183 SRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVESII 1242
Query: 747 GAIFVDSGCN 756
GAIFVDSG +
Sbjct: 1243 GAIFVDSGGD 1252
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 604 LVNVRHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
LV R E++L + F+D ++ A+T L + P YQR EF GD+VL + + L+
Sbjct: 872 LVATRLCETVLRDIQFQDLRHVITAIT---MPLAQAPTDYQRYEFFGDSVLKFTVAASLF 928
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
P G LT+ A V N +++ GL +I+ KW + E+L
Sbjct: 929 YNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRKWSAPLIS--EKLYA 986
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
++ + + K L D++E+L GA ++D G +K
Sbjct: 987 SAS----TRSMSAKVLADVVEALIGAAYIDGGLHK 1017
>gi|158705946|sp|Q0UL22.2|DCL2_PHANO RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
Length = 1399
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 189/414 (45%), Gaps = 57/414 (13%)
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV 437
E+ + C + P S F +PSI+HR ++A L+ LL V + ++
Sbjct: 875 EMAAKDCIVDPVPAPYSVFA--LLLPSILHRFGMAIIAETLRTTLLG----PVALDSAHS 928
Query: 438 L---EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
L A+ + + + LE LGD LK+ A+ L E L+ KK RI+SN
Sbjct: 929 LLLTRALKSSAADGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNG 988
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWM--IPGDNSGSYELNDHSLFNERKIYVTGRKKVKS 552
L + L F+ T+ F W GD L E V +++ S
Sbjct: 989 FLARATIAAGLDRFMITKSFTGAKWAPRYAGD-----------LLAETGPAV--KEERSS 1035
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAE----RLVNVR 608
K +AD++E+LIGA + GG ++ + + +++VP +A L+ +
Sbjct: 1036 KLIADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANSILHEAAPAEADLMGLD 1095
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE+L+ Y+F+ LL+EALTH S+ P + Y+RLEFLGDAVLDY+I+ L+ P L
Sbjct: 1096 VLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPEL 1155
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA------SQELYKW---------INIT 713
S + +R+A+VN A + + + ++ SQ+ W +N
Sbjct: 1156 SHQKMHAIRTATVNASFLAFRLFETTIDEETINKTSMRPESQKRAIWQFLRSGSPSLNAN 1215
Query: 714 VDSFER------------LSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
D+ R L+ + F W + T PK L D++ES+ GA+++DS
Sbjct: 1216 RDNALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDS 1269
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD +L ++ TV+L P LT + V+N A +++ GL + ++
Sbjct: 946 YQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMIT 1005
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV- 760
S KW L T E K + DIIESL GA + G K V+
Sbjct: 1006 KSFTGAKWAPRYAGDL----LAETGPAVKEERSSKLIADIIESLIGACYTVGGFEKAVLC 1061
Query: 761 FESIRPLLEPMIT 773
+++ P LEP I+
Sbjct: 1062 VQTLLP-LEPWIS 1073
>gi|367022572|ref|XP_003660571.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
gi|347007838|gb|AEO55326.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
Length = 1604
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 191/459 (41%), Gaps = 76/459 (16%)
Query: 378 ELPPELCRIIMGPMSLSTF------YSFTFVPSIMHRLQSLLLAVNL-----KNMLLDHC 426
+L P+ C +++ P+ +S +TF PSIMHR+ S L+A+ N+ D
Sbjct: 1019 DLEPKPCFLVLEPLRISPLPVDVVAMVYTF-PSIMHRIDSNLVALEACKKLGLNIRPDLA 1077
Query: 427 MQNVTIPTSKVLEAITTK---KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLL 483
++ T + E K + G + E LE LGD FLK A + +F + E
Sbjct: 1078 LEAFTKDSDNTDENDAEKIHFQGGMGSNYERLEFLGDCFLKMATTISIFTLLPDKDESEY 1137
Query: 484 SVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIY 543
+++ ++ N L + KL +IR+ FD + W G +L ++
Sbjct: 1138 HIERMLLVCNRNLFNKALEVKLEEYIRSTAFDRRSWYPEG----------LTLKRGKRRD 1187
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGGEN-----------VGLIFLDR---IGIKVDFV 589
V G+ ++ KT+ADV EALIGA T + V ++ DR + D+
Sbjct: 1188 VDGKHQLADKTIADVCEALIGAAYLTAQDRSPSDFDLAVRAVTVMVRDRNHAMSSYGDYY 1247
Query: 590 NVPYERQFQV---QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-MLPEIPRCYQRL 645
++Q ++ + Y+FR P LL A H +Y E YQRL
Sbjct: 1248 AAYRPAKWQTVPCSPAQIDMAARFRERMGYAFRHPRLLRSAFQHPAYPTFYEGLPSYQRL 1307
Query: 646 EFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE 705
EFLGDA+LD +L+ ++P P LT+ + A V+N A +V G HK I+H S +
Sbjct: 1308 EFLGDALLDMACVEFLFRRFPGADPQWLTEHKMAMVSNQFLACLAVYLGFHKSIVHCSSQ 1367
Query: 706 LYKWINITVDSFE-----------------------------RLSLESTFGWESETSFPK 736
+ + V E + F PK
Sbjct: 1368 VQSEVAGFVAEVEGELRAAKEGTEEGEEGEEEEEEKKERGGEEEAFARDFWVRCARRPPK 1427
Query: 737 ALGDIIESLSGAIFVDSGCN----KEVVFESIRPLLEPM 771
L D++E+ GA+FVDSG + + + +RP E M
Sbjct: 1428 CLADVVEAYVGAVFVDSGYDFGEVRRFFADHVRPFFEDM 1466
>gi|302694007|ref|XP_003036682.1| hypothetical protein SCHCODRAFT_102832 [Schizophyllum commune H4-8]
gi|300110379|gb|EFJ01780.1| hypothetical protein SCHCODRAFT_102832, partial [Schizophyllum
commune H4-8]
Length = 1489
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 214/508 (42%), Gaps = 72/508 (14%)
Query: 343 FDQELLLNGRRIFHAQNYLS--KCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFT 400
F+Q L+ RI A N L+ + +K P+K PELC I P S+ +
Sbjct: 912 FNQPLI-EVERIPQAHNCLTLMQGPPDKGDVPAKYMI---PELCFKITIPASV--MRTAL 965
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PS++ R+ + L L + +H I + A+TT + E LE GD
Sbjct: 966 LLPSVLTRIDEIFLVKELNAIHFNHI-----IAEDLLHAALTTPSAGFDRNYERLELYGD 1020
Query: 461 SFLKYAASQQLF-KTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
+FLKY AS LF ++ N EG L + +ISN L + LP F+ +PF + W
Sbjct: 1021 AFLKYLASLHLFVMSHHNDSEGKLHAARRPLISNQKLMECSLALGLPSFVIGKPFVIRFW 1080
Query: 520 MI-------PGDNSGSYELNDHSLFNERKIYVTG-------------------------- 546
PG ++ + + E +
Sbjct: 1081 GPANFRMNPPGGSAEKGKEKEQGKVAETPPPASDAVGANQGEGGGGKKRRKKKKGEPNDG 1140
Query: 547 --RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAE-- 602
++ + K +ADVVEA++GA + G + GL +G+ V N F+ Q
Sbjct: 1141 QIQQMLSDKALADVVEAILGAAHLSAGRDGGLQVAKALGLPV-AKNADIWDDFKAQVSMH 1199
Query: 603 ---------RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
R + ++S++ P LL ALTH + P Y+R+EFLGDA+L
Sbjct: 1200 ATPSAVSFLRPGTIDGVQSVIGQKLNKPELLALALTHANNSSPL--GNYERIEFLGDALL 1257
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+ + Y+Y KY P LT ++SA V N A + GL++H+ S ++ + IN
Sbjct: 1258 DFQVVEYVYRKYTQQPPSVLTLLKSAMVGNSPLAAICAESGLYRHLHQKSHQIQQSINTY 1317
Query: 714 VDSFERLSLESTFGWESETS-----FPKALGDIIESLSGAIFVDSGCN----KEVVFESI 764
+ + ++ + + + + AL DI+ES+ GAI++ +++ +
Sbjct: 1318 LTALQKAKQKEYAAADDDLRERGQYWFDALSDIVESIVGAIYISDDLEWTGVQQLFKHFL 1377
Query: 765 RPLLEPMITPETMRLQPARELNEYCQKH 792
+P E I T+ + P + L E Q
Sbjct: 1378 QPFYEKHIRMNTLAVHPTKILLELVQSQ 1405
>gi|317150438|ref|XP_001824024.2| dicer-like protein 1 [Aspergillus oryzae RIB40]
gi|158706453|sp|Q2U6C4.2|DCL1_ASPOR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1523
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 182/417 (43%), Gaps = 54/417 (12%)
Query: 384 CRIIMGPMSLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKV 437
C + + P+ +S S P+I++RL + L+A L+ C ++++
Sbjct: 996 CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIA-------LEGCKTLDLSVKPEYA 1048
Query: 438 LEAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLL 483
LEA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 1049 LEAFTKDSDNTEEHRVQQIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDF 1108
Query: 484 SVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIY 543
V + +I N L +L + R+ F W D DH +KI
Sbjct: 1109 HVNRMCLICNKNLFNTALKKELYQYTRSRGFSRHTWY--PDGLTLLHGRDH----RKKIS 1162
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGG-ENVGLIFLDRIGIKVDFVN------VPYER- 595
+ ++ KTVADV EALIGA L +GG N + + + VD N Y
Sbjct: 1163 AESKHALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSS 1222
Query: 596 ----QFQVQAERLVNV---RHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
++Q Q+ + R +E L Y F+ P LL A TH SY ++P CYQRLE
Sbjct: 1223 YMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVP-CYQRLE 1281
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
FLGD++LD + L+ +YP P LT+ + A V+N +VK GLH H+ H S L
Sbjct: 1282 FLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHFSNPL 1341
Query: 707 YKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
I + + ES W PK L D++E+ GA FVDS VV
Sbjct: 1342 QSQITHYAEEIQAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRVV 1398
>gi|449682783|ref|XP_002165718.2| PREDICTED: endoribonuclease Dicer-like [Hydra magnipapillata]
Length = 1001
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 153/293 (52%), Gaps = 38/293 (12%)
Query: 517 KMWMIPGDNSGSYELNDHSLFN--ERKIYVTGRKKVKSKTVADVVEALIG-----AFLST 569
K+ + +N G Y+ + L N + K YVT + VKS +V + EAL F
Sbjct: 675 KIKINKSENQGRYQSSVLDLENLLQLKNYVT--ENVKSPSVLKIFEALTTRQASMPFDLE 732
Query: 570 GGENVGLIFLDR-IGIKVDFVNVPY-ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
E +G FL + + I V F N + E + ++ ++ +N HL ++A
Sbjct: 733 RLEVLGDSFLKQAVSIFVFFQNPSFHEGKLTIRRKKFLNKSHL--------------IQA 778
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
TH SY+ + CYQ+ EFLGDA+LD+LIT+++ + LSPG LT RSA VNN+ +
Sbjct: 779 FTHLSYLSNSVTGCYQQYEFLGDAILDFLITLHIQSNTQNLSPGQLTYFRSAVVNNNTFG 838
Query: 688 LSSVKHGLHKHILHASQELY----KWINITVD--SFERLSLESTF-----GWESETSFPK 736
L ++KH +K+I +S EL+ +I I D + ES F G E PK
Sbjct: 839 LLAIKHSFYKYIYSSSNELFSSYNSFIEIVKDDHGLKDEYFESPFVICPTGSEEGYQAPK 898
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNE 787
LGD+ ES++GAIF+DSG + V++ PLL+P+I ++L PA + E
Sbjct: 899 VLGDLFESVAGAIFLDSGLDLVTVWKIYYPLLKPVIDKYMIKLPRHPAVDFFE 951
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 44/242 (18%)
Query: 290 IYNSVVCTPHSGQ----IYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQ 345
IY + V + + G+ +YY+T + LN +S G T+ ++Y E+Y I++ ++
Sbjct: 543 IYENCVVSKNYGESKNRMYYVTAI-SKLNTSSFIE----GKKTFVQYYLEKYNIEISPNK 597
Query: 346 ELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-LPPELCR-IIMGPMSLSTFYSFTFVP 403
L+ Q + C + ++ E L PELC+ + + P L + +P
Sbjct: 598 PLI--DVISCSQQISFTNCESNTNTKKKNVNMEKLVPELCKKVSLFPADLH--FQLPCLP 653
Query: 404 SIMHRLQSLLLAVNLKNM----------------------------LLDHCMQNVTIPTS 435
I++ + LA+ LK+M L ++ +NV P+
Sbjct: 654 RIIYFYEYYFLALELKDMIAEKIKINKSENQGRYQSSVLDLENLLQLKNYVTENVKSPSV 713
Query: 436 -KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
K+ EA+TT++ F LE LE LGDSFLK A S +F + HEG L++++ + ++ +
Sbjct: 714 LKIFEALTTRQASMPFDLERLEVLGDSFLKQAVSIFVFFQNPSFHEGKLTIRRKKFLNKS 773
Query: 495 AL 496
L
Sbjct: 774 HL 775
>gi|260831340|ref|XP_002610617.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
gi|229295984|gb|EEN66627.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
Length = 1760
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 123/229 (53%), Gaps = 17/229 (7%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
L + E + YSF D + +++A TH SY I CYQRLEFLGDAVLDYLIT +L+
Sbjct: 1506 LSGYQQFEETVQYSFNDKAYMLQAFTHPSYHYNTITDCYQRLEFLGDAVLDYLITNHLFK 1565
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
SPG LTD+RSA VNN +A +VK+ HK++ S EL+ I+ V + E
Sbjct: 1566 DPQQHSPGALTDLRSALVNNTIFASLAVKYDYHKYLKFVSPELFNIISNFVQFQQEQGEE 1625
Query: 724 STFGWES-----------ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
++ + PKALGD+ ES++GAI++DSG + E V+ +++P+I
Sbjct: 1626 QGMDSQTYINDEGEEESEDIEVPKALGDVFESVAGAIYLDSGMSLETVWRVYYRMMKPLI 1685
Query: 773 TPETMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
+ ++ P REL E + FS + +GK VTV V G
Sbjct: 1686 DKFSAKVPRSPVRELLEMEPETAKFSPSERT---YDGKVRVTVTVIGKG 1731
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 51/237 (21%)
Query: 404 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT-SKVLEAITTKKCQEGFHLESLETLGDSF 462
S M L S+ + + +LD + + P+ S +L+A+T + F+LE LET+GDSF
Sbjct: 1199 SNMPDLNSIPESTSFLEPMLDLDLDSHPGPSPSLILQALTLSNAGDFFNLERLETIGDSF 1258
Query: 463 LKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WMI 521
LK+A + L+ TY HEG LS + R +SN L +LG L + FDP + W+
Sbjct: 1259 LKHAITTFLYCTYSRVHEGKLSYMRSRQVSNLNLYRLGKRKGLASRMVASIFDPAVNWLP 1318
Query: 522 PG----------DNSGSYELNDHSLFNE-------------------------RKIYVTG 546
PG +++GS D SL E + V G
Sbjct: 1319 PGFCIQNNREDKEDAGSSS-KDSSLDVEPGGNGMTTSKNPIAQVTGYDVTPLKASVLVNG 1377
Query: 547 -------------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN 590
+ K++AD VEAL+G +L+T G +FL +G+KV +++
Sbjct: 1378 DAIKRLLSYDLHMEHCIADKSIADCVEALLGCYLTTCGPRAAQLFLCWLGVKVSYLD 1434
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 40 DINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTA----CLEACKKLHQIGALTDNLLP 94
D NK M TLYLP N ++ I QG + ++ A L+AC+ LHQ G L DNLLP
Sbjct: 621 DGNKYMA--TLYLPINSSLRDPI-QGPVMPTRRLAEKAVALKACQLLHQAGELDDNLLP 676
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 621 PSLLVEALT---HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
PSL+++ALT G + +RLE +GD+ L + IT +LY Y + G L+ MR
Sbjct: 1230 PSLILQALTLSNAGDFF------NLERLETIGDSFLKHAITTFLYCTYSRVHEGKLSYMR 1283
Query: 678 SASVNN 683
S V+N
Sbjct: 1284 SRQVSN 1289
>gi|169608916|ref|XP_001797877.1| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
gi|160701743|gb|EAT85008.2| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 189/414 (45%), Gaps = 57/414 (13%)
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV 437
E+ + C + P S F +PSI+HR ++A L+ LL V + ++
Sbjct: 493 EMAAKDCIVDPVPAPYSVFA--LLLPSILHRFGMAIIAETLRTTLLG----PVALDSAHS 546
Query: 438 L---EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
L A+ + + + LE LGD LK+ A+ L E L+ KK RI+SN
Sbjct: 547 LLLTRALKSSAADGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNG 606
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWM--IPGDNSGSYELNDHSLFNERKIYVTGRKKVKS 552
L + L F+ T+ F W GD L E V +++ S
Sbjct: 607 FLARATIAAGLDRFMITKSFTGAKWAPRYAGD-----------LLAETGPAV--KEERSS 653
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAE----RLVNVR 608
K +AD++E+LIGA + GG ++ + + +++VP +A L+ +
Sbjct: 654 KLIADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANSILHEAAPAEADLMGLD 713
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE+L+ Y+F+ LL+EALTH S+ P + Y+RLEFLGDAVLDY+I+ L+ P L
Sbjct: 714 VLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPEL 773
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA------SQELYKW---------INIT 713
S + +R+A+VN A + + + ++ SQ+ W +N
Sbjct: 774 SHQKMHAIRTATVNASFLAFRLFETTIDEETINKTSMRPESQKRAIWQFLRSGSPSLNAN 833
Query: 714 VDSFER------------LSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
D+ R L+ + F W + T PK L D++ES+ GA+++DS
Sbjct: 834 RDNALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDS 887
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD +L ++ TV+L P LT + V+N A +++ GL + ++
Sbjct: 564 YQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMIT 623
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV- 760
S KW L T E K + DIIESL GA + G K V+
Sbjct: 624 KSFTGAKWAPRYAGDL----LAETGPAVKEERSSKLIADIIESLIGACYTVGGFEKAVLC 679
Query: 761 FESIRPLLEPMIT 773
+++ P LEP I+
Sbjct: 680 VQTLLP-LEPWIS 691
>gi|396464039|ref|XP_003836630.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
gi|312213183|emb|CBX93265.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
Length = 1393
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 188/421 (44%), Gaps = 53/421 (12%)
Query: 369 QREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH-CM 427
Q P++ + LP C + P S F PSI+H+ + L+A L+ LL
Sbjct: 861 QAIPNQKAEPLPISDCMVDNLPAQYSIFA--LLFPSILHKFECDLIADQLRTSLLSPVAF 918
Query: 428 QNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKK 487
Q + +P +++A+T+ E + LE GD LK+ +S L E L+ KK
Sbjct: 919 QLLDLPL--LVKALTSSSTGEVEDYQQLEFYGDCILKFISSLHLMAANPKEPESFLTQKK 976
Query: 488 DRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGR 547
I+SN +L + L ++ T+ F W L E +
Sbjct: 977 GNIVSNGSLTRASLSAGLDRYVITKRFTGAKWQ-------------PRLLVETVTVTSPP 1023
Query: 548 KKVK--SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ----FQVQA 601
KVK SK +ADVVE++IGA GG + + +++++P F +
Sbjct: 1024 NKVKLSSKLIADVVESIIGASFVVGGFPKAFACIQTLLPLENWISIPDANNILYDFAQEG 1083
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+ LE L+ ++F LL++A+TH SY+ P + YQR EFLGDAVLD++IT L
Sbjct: 1084 PTFTGLSTLERLIGHTFSKKFLLLDAITHASYLGPNVHCDYQRTEFLGDAVLDFIITKRL 1143
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA--------SQELYKWINIT 713
Y P L + +R+A VN A + + +H+ + S+ L++++
Sbjct: 1144 YAHTPPLEHQTMHAIRTAMVNASFLAFRMFETTIDEHLTNKATLQTDVQSRALWQFLRSG 1203
Query: 714 VD--------SFER-----------LSLESTFGWE--SETSFPKALGDIIESLSGAIFVD 752
+F++ L ++ + W + T PK L DI+ES+ GAI++D
Sbjct: 1204 APQVNAAREIAFKQHQEARGQILVALERDARYPWHLLALTDPPKFLSDIVESVLGAIYID 1263
Query: 753 S 753
S
Sbjct: 1264 S 1264
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L S + + D LLV+ALT S E YQ+LEF GD +L ++ +++L P
Sbjct: 912 LLSPVAFQLLDLPLLVKALTSSSTGEVE---DYQQLEFYGDCILKFISSLHLMAANPKEP 968
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
LT + V+N +S+ GL ++++ KW RL +E+
Sbjct: 969 ESFLTQKKGNIVSNGSLTRASLSAGLDRYVITKRFTGAKWQ-------PRLLVETV---- 1017
Query: 730 SETSFP-------KALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
+ TS P K + D++ES+ GA FV G K F I+ LL
Sbjct: 1018 TVTSPPNKVKLSSKLIADVVESIIGASFVVGGFPK--AFACIQTLL 1061
>gi|41469332|gb|AAS07188.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 416
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 10/194 (5%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YF P P+FDI+K G CTL+LP + P+QTV +G LK+T CL+AC++LH IGALTD+
Sbjct: 192 YFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDS 251
Query: 92 LLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TYHCYLIELKQNFN 147
LLP++ V EE D E P YFP E V+ +++ Y+CY I L+
Sbjct: 252 LLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPK 307
Query: 148 YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIA 207
P DI+LA++ +L S+ +F L + +V +K++G I L ++V++ RRFQ
Sbjct: 308 TASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTT 366
Query: 208 LFR-VIMDHNLDKL 220
+ +I D +L+ L
Sbjct: 367 ILSFLIGDDHLEIL 380
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 89 FDPSATVCSFIQSRGRARMENSDYLLLVGR 118
>gi|154301554|ref|XP_001551189.1| hypothetical protein BC1G_10104 [Botryotinia fuckeliana B05.10]
Length = 1842
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 189/434 (43%), Gaps = 76/434 (17%)
Query: 371 EPSKISFELPPELCRIIMGPMSLSTFYSFT-----FVPSIMHRLQSLLLAVNLKNMLLDH 425
E SK SF II+ P+ +S + +P+I+HR++S L+A+ ++L
Sbjct: 1290 ETSKKSF--------IILEPLKVSPLPTTVGAMAYLLPAIIHRVESYLIALEATDLL--- 1338
Query: 426 CMQNVTIPTSKVLEAITTKKCQEGFH--------------LESLETLGDSFLKYAASQQL 471
++ I LEA+T G H E LE LGD FLK S L
Sbjct: 1339 ---HLDIRPDLALEAVTKDSDNSGEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISL 1395
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL 531
+ + E V + +I N L +L +IR+ F+ + W G
Sbjct: 1396 YGLNPDSDEFRYHVDRMCLICNKNLFNTALKLELYKYIRSAAFNRRAWYPEGPE------ 1449
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----- 586
L + K+ K+VADV EA+IGA L + E+ + R +V
Sbjct: 1450 ----LLRGKTATAPNTHKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNSDN 1505
Query: 587 -------DFVNVPYERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML- 635
D+ + + ++Q A ++ R +E Y F+ P LL A H +Y+
Sbjct: 1506 HNAVVWSDYYKLYEKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLFI 1565
Query: 636 -PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG 694
+IP CYQRLEFLGD++LD +L++ +PT P LT+ + A V+N VK G
Sbjct: 1566 YEQIP-CYQRLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLG 1624
Query: 695 LHKHILHASQELYKWI-NITVDSFERL-----------SLESTFG---WESETSFPKALG 739
HKH+L ++ K I + + D E L +E + W + PK L
Sbjct: 1625 FHKHLLTLDSQVQKMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWIAVRQPPKCLP 1684
Query: 740 DIIESLSGAIFVDS 753
DI+E+ GAIFVDS
Sbjct: 1685 DIVEAFIGAIFVDS 1698
>gi|390598592|gb|EIN07990.1| hypothetical protein PUNSTDRAFT_144457 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1435
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 197/440 (44%), Gaps = 34/440 (7%)
Query: 391 MSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGF 450
MS + +F +P ++HR+ L K L IP ++EA T GF
Sbjct: 919 MSAYLWRTFHLLPRLLHRVTDLYRVQRAKQEL-----GLPPIPDDLLVEAYTLPHTGAGF 973
Query: 451 HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIR 510
+ LETLGDS LK L ++ HEG L + ++N L L ++
Sbjct: 974 SNQRLETLGDSVLKLCVIVHLLNRFRRRHEGQLDALRRNAVANRTLLARAHAIGLGSYLT 1033
Query: 511 TEPFDPKMW--MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLS 568
E + W ++P + H+ F+ R + + + D +EA +GA
Sbjct: 1034 CETMSVRTWRHVVPEEQ--------HTPFDTTSARFVARS-IPRRCLQDCMEATLGAAFL 1084
Query: 569 TGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLL 624
GG G + +G V + N+ Y R+ + ++ L+Y F + LL
Sbjct: 1085 GGGIPMALQAGTVLGMSLGGPVPW-NLRYGRK-PIGKTPAALFHRVQEALHYDFHNGDLL 1142
Query: 625 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
+EA TH S+ YQRLEFLGDA++D ++ YLY K+P +PG L+ RS +V +
Sbjct: 1143 IEASTHPSFESGTF-GSYQRLEFLGDALIDLVVMQYLYRKFPEGTPGQLSWARSRAVCSQ 1201
Query: 685 CYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIE 743
A +V L+K +L + EL + + E S E + PKAL D++E
Sbjct: 1202 TMAWVAVTQLELNKIMLVNNSELNIALAKYIPILEDFSAEDIIAKSWKLDPPKALSDVLE 1261
Query: 744 SLSGAIFVDSGCNKE----VVFESIRPLLEPM---ITPETMRLQPARELNEYCQKHHFSM 796
S+ GA+ +D+ + E VV +R +L+ + + P+ + C++ +F
Sbjct: 1262 SIMGAVLLDTAYDYERSEAVVEWVMRDVLDALTLDLPPDPISQLMISTAKAGCRRINF-- 1319
Query: 797 KKTVA-PRINGKAAVTVEVH 815
KKT + P+++ ++V VH
Sbjct: 1320 KKTQSNPKVDRNDGISVIVH 1339
>gi|156371137|ref|XP_001628622.1| predicted protein [Nematostella vectensis]
gi|156215603|gb|EDO36559.1| predicted protein [Nematostella vectensis]
Length = 261
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 113/195 (57%), Gaps = 18/195 (9%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
+E+ L Y+FRD +L++ALTH SY + Y++LEFLGDA+LDYL+T ++ ++P
Sbjct: 9 VEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPR 68
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV------------- 714
LSPG +TD+RSA VNN A +++ HKH+ S L+K + V
Sbjct: 69 LSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVRRLSEIEEKETRP 128
Query: 715 DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
D ++E G E+ PK LGD+ E+L GA++VD G ++E+ + I PLL P+I
Sbjct: 129 DQLLLTTVEDGRGGEA-IEVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPLLTPIIEH 187
Query: 775 ETMRL--QPARELNE 787
++ L P R+L E
Sbjct: 188 YSVHLPISPTRQLVE 202
>gi|242763899|ref|XP_002340666.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
gi|218723862|gb|EED23279.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
Length = 1494
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 210/490 (42%), Gaps = 72/490 (14%)
Query: 403 PSIMHRLQSLLLAVNLKNML-----LDHCMQNVTIPTSKV----LEAITTKKCQEGFHLE 453
P+++ R S L+A + L L++ ++ VT + LE I ++ G + E
Sbjct: 988 PAVITRFDSYLVARECTDTLGLKVQLEYALEAVTKDSDNTGEHRLEQIHFQRGM-GKNYE 1046
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGD FLK A S LF N E V + +I N L K+ IR++
Sbjct: 1047 RLEFLGDCFLKMATSISLFVESPNDQEYDFHVNRMTLICNRNLFNTAIQRKIYEHIRSKG 1106
Query: 514 FDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 573
F + W G + N+ + KT+ADV EALIGA L +GG
Sbjct: 1107 FSRRNWYPDGMKLLRGKANEDQGLTH---------ALGEKTIADVCEALIGASLLSGGP- 1156
Query: 574 VGLIFLDRIGIKVDFVNV----------------------PYERQFQVQAERLVNVRHLE 611
++R + V V PY+ + E+ + R +E
Sbjct: 1157 -----VNRFDMAVKAVTALVNSDHHNVDNWAEYSSRYSLPPYQIKEADGFEKDL-ARQVE 1210
Query: 612 SLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L Y F+ P LL A TH SY +P CYQRLEFLGD++LD + LY ++P
Sbjct: 1211 MKLGYCFQYPKLLRSAFTHPSYPSAWSTVP-CYQRLEFLGDSLLDMVCVEDLYERFPDRD 1269
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL--SLESTFG 727
P LT+ + A V+N +V+ LH H+ + S L I V + S ++
Sbjct: 1270 PQWLTEHKMAMVSNKFLGSLAVRLSLHTHLQYFSNPLQAQIARAVQDSQLAYDSHQTVDF 1329
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVV----FESIRPLLEPMITPETM-RLQPA 782
W PK L D++E+ GAIFVDSG + V+ + I+P E M +T P
Sbjct: 1330 WLHTDDPPKCLSDMVEAYLGAIFVDSGFDFGVIESFYAKHIKPYFEDMALYDTFANKHPT 1389
Query: 783 ----RELNEYCQKHHFSMKKTVAPRINGK-----AAVTVE--VHANGTLFKHTHADADKE 831
R+L + ++++ P ++G AAV V V A GT +A K
Sbjct: 1390 TFLHRKLTDDFGCIQYTLRAAEIPSVDGAPPVVLAAVLVHDVVLAQGTASSGRYA---KI 1446
Query: 832 TAKKVASKEV 841
A +VA K +
Sbjct: 1447 KASEVAMKNL 1456
>gi|302819689|ref|XP_002991514.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
gi|300140716|gb|EFJ07436.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
Length = 569
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 40/292 (13%)
Query: 227 LWLRDNLEIDYLLLPASEQ--SIDWEPVA-------------SLSFPCD---IGLKHHKN 268
LW N +LLLP + SIDW V S S P D +G K H
Sbjct: 103 LW---NKSQAFLLLPVHDDNDSIDWTSVHATAGVYRTLCSNFSPSSPIDGDGVGEKTH-- 157
Query: 269 CSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAIT 328
A ++ T +G + + + + VV T H+G+++ +TGVL + A SL + T
Sbjct: 158 ------ADMLCTANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLPKR---GFT 208
Query: 329 YKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIM 388
Y +Y+++Y L + LL + N L + +++ + ELPPELC +
Sbjct: 209 YIDYYKDKYQRTLRLPDQPLLKAKPTHAFHNLLIRPKEDHGSRQEESFVELPPELCLCLE 268
Query: 389 GPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQE 448
L S FVPS +H+ S + A+ L++ L IP +K+LEAIT+KKC E
Sbjct: 269 IKSGL--IRSLYFVPSFLHQFTSTVCAIQLRSPLWPW------IPAAKILEAITSKKCHE 320
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
F ESLE LGDSFLKY +Q+LF Y HEG LS +++ + ++ G
Sbjct: 321 EFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTG 372
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 36/187 (19%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY--------------- 686
Y+ LE LGD+ L Y++T L+ Y G L+ R+ +
Sbjct: 324 YESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTGLARACLPLIHQ 383
Query: 687 --ALSSVKHGLH----------KHILHASQE----LYKWINITVDSFERLSLESTFGWES 730
+L S++H L + I HASQ Y+ ++ +D R +++
Sbjct: 384 NASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVELDCEIRKFVQNVKEKPD 443
Query: 731 ETSF-----PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAREL 785
+ F PK LGD++ES++GAIFVD+ + E ++ + PLL P++TP T+R P R L
Sbjct: 444 ASCFEDLSAPKVLGDLLESITGAIFVDTNFDLEKLWRVVLPLLSPLVTPGTLRFHPVRIL 503
Query: 786 NEYCQKH 792
E C +
Sbjct: 504 MELCARQ 510
>gi|225684610|gb|EEH22894.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1415
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 183/425 (43%), Gaps = 77/425 (18%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P C I P+ + F PSI+H++++ L+A L +L ++ + V+
Sbjct: 911 PARECSIDKLPLEYTMFS--LLCPSIIHKVETFLIAEELNKTILSPVGFTDLNL----VI 964
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
A+ +E + + +E LGDS LK+ S QL HEGLLS KD ++SN L
Sbjct: 965 TALCAPDAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSY 1024
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
+ L FI + F W P N E D R+++ +KT+ADV
Sbjct: 1025 AAIETGLDKFIFMDIFTGVKWR-PRYNKAHVEEQD-----------IPRREMSTKTLADV 1072
Query: 559 VEALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNV------- 607
+EAL+GA GG E IFL I +P+ +F + V
Sbjct: 1073 IEALLGAATIDGGRTKVEKCLKIFLPEIRW------MPFADRFDALYNSVPEVYENLPSS 1126
Query: 608 --RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
R +ESL+ Y F L +A TH S P YQRLEFLGD++LD++I +++N
Sbjct: 1127 WFRDIESLVGYIFNKKVFLAQAFTHPSN--PGSTMSYQRLEFLGDSILDHIIVDHIFNSP 1184
Query: 666 PTLSPGDLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHI 699
D+ MR++ N D A +++ K L +++
Sbjct: 1185 RNFQHVDMHLMRASLANADFLAFLCIGMTTEEERGEIVEASRNGTFTRMTTRKISLWQYM 1244
Query: 700 LHA-SQELYKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSGA 748
H S EL TV+ ++ L + T ++P AL D+IES+ GA
Sbjct: 1245 RHGTSWELTVSQQQTVNQYQALKADITKALYESDTYPWALLSRLRAQKFFSDLIESVLGA 1304
Query: 749 IFVDS 753
IF+DS
Sbjct: 1305 IFIDS 1309
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQR+EFLGD++L + ++ L P G L++ + V+N + ++++ GL K I
Sbjct: 978 YQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETGLDKFIFM 1037
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
KW + + +E E S K L D+IE+L GA +D G K
Sbjct: 1038 DIFTGVKW----RPRYNKAHVEEQDIPRREMS-TKTLADVIEALLGAATIDGGRTK 1088
>gi|226286856|gb|EEH42369.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1450
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 183/425 (43%), Gaps = 77/425 (18%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P C I P+ + F PSI+H++++ L+A L +L ++ + V+
Sbjct: 911 PARECSIDKLPLEYTMFS--LLCPSIIHKVETFLIAEELNKTILSPVGFTDLNL----VI 964
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
A+ +E + + +E LGDS LK+ S QL HEGLLS KD ++SN L
Sbjct: 965 TALCAPDAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSY 1024
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
+ L FI + F W P N E D R+++ +KT+ADV
Sbjct: 1025 AAIETGLDKFIFMDIFTGVKWR-PRYNKAHVEEQD-----------IPRREMSTKTLADV 1072
Query: 559 VEALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNV------- 607
+EAL+GA GG E IFL I +P+ +F + V
Sbjct: 1073 IEALLGAATIDGGRTKVEKCLKIFLPEIRW------MPFADRFDALYNSVPEVYENLPSS 1126
Query: 608 --RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
R +ESL+ Y F L +A TH S P YQRLEFLGD++LD++I +++N
Sbjct: 1127 WFRDIESLVGYIFNKKVFLAQAFTHPSN--PGSTMSYQRLEFLGDSILDHIIVDHIFNSP 1184
Query: 666 PTLSPGDLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHI 699
D+ MR++ N D A +++ K L +++
Sbjct: 1185 RNFQHVDMHLMRASLANADFLAFLCIGMTTEEERGEIVEASRNGTFTRMTTRKISLWQYM 1244
Query: 700 LHA-SQELYKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSGA 748
H S EL TV+ ++ L + T ++P AL D+IES+ GA
Sbjct: 1245 RHGTSWELTVSQQQTVNQYQALKADITKALYESDTYPWALLSRLRAQKFFSDLIESVLGA 1304
Query: 749 IFVDS 753
IF+DS
Sbjct: 1305 IFIDS 1309
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQR+EFLGD++L + ++ L P G L++ + V+N + ++++ GL K I
Sbjct: 978 YQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETGLDKFIFM 1037
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
KW + + +E E S K L D+IE+L GA +D G K
Sbjct: 1038 DIFTGVKW----RPRYNKAHVEEQDIPRREMS-TKTLADVIEALLGAATIDGGRTK 1088
>gi|296809942|ref|XP_002845309.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
gi|238842697|gb|EEQ32359.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
Length = 1521
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 210/475 (44%), Gaps = 76/475 (16%)
Query: 331 KHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGP 390
K+ R+ + +DQ +L I +N+L E ++ P + + + E +I P
Sbjct: 951 KNSRARFLAKCNWDQPVL-RAELIQLRRNFLDI--DENKKGPP-VDYYICAEALKISSIP 1006
Query: 391 MSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKVLEAIT--TKKCQ 447
M ++T F F P+++ R++S L+A L+ C + + I LEA+T ++ +
Sbjct: 1007 MPVATLI-FVF-PAMISRMESYLIA-------LEACEKLQLKISPELALEALTKDSENTE 1057
Query: 448 E------------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
E G + E LE LGD FLK A S LF ++ E VK+ +I N
Sbjct: 1058 EHGLEQIRFQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMLLICNQN 1117
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIPG----------DNSGSYELNDHSLFNERKIYVT 545
L ++ +IR++ F + W G +N G H+L +
Sbjct: 1118 LFNNAIILEVFKYIRSKSFSRRGWYPEGLTLLKGKDKKENPGG---PTHALAD------- 1167
Query: 546 GRKKVKSKTVADVVEALIGAFLSTGGEN--------VGLIFLD----RIGIKVDF---VN 590
K++ADV EALIGA L GG + IF++ R+ D+ +
Sbjct: 1168 -------KSIADVCEALIGASLLAGGPDHKFDMATKAVTIFVNSDDHRVERWADYSTLYS 1220
Query: 591 VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFL 648
+ + A +E L Y F+ P LL A H SY +P CYQRLEFL
Sbjct: 1221 LTTYQTAAATASEADVANQIEEKLGYRFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFL 1279
Query: 649 GDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYK 708
GD++LD +L+ KYP P LT+ + A V+N +V LH H++H S L
Sbjct: 1280 GDSLLDMACVNHLFTKYPDKDPQWLTEHKMAMVSNKFLGSLAVGLNLHVHLIHISNVLQG 1339
Query: 709 WINITVDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
I + + + +E + W PK L DI+E+ GAIFVDS N +V+
Sbjct: 1340 QITCYTEELQAMKMEMGGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVI 1394
>gi|340727238|ref|XP_003401955.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dcr-1-like [Bombus
terrestris]
Length = 1957
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 119/229 (51%), Gaps = 23/229 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE + Y F D S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1704 ELEKSIGYEFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQH 1763
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
SPG LTD+RSA VNN +A +V+ G HK+ H S L +I ++ F R+ E+
Sbjct: 1764 SPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSI 1819
Query: 729 ESE--------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
E PKALGD+ ESL+GAI++DSG + + V+ +++ I
Sbjct: 1820 SEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQ 1879
Query: 775 ETMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTL 820
+ + P REL E + F + +A + VTV+V G+
Sbjct: 1880 FSTNVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFGKGSF 1926
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GD FLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1425 SLILQALTMSNANDGINLERLETIGDXFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1484
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1485 NLYRLGRQKMLGESMIATKFEPHDNWLPP 1513
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N++ PSL+++ALT + +RLE +GD L Y IT YLY Y + G
Sbjct: 1416 LENHAGPSPSLILQALTMSN---ANDGINLERLETIGDXFLKYAITTYLYCTYDNIHEGK 1472
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1473 LSHLRSKQVSN 1483
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 36 TPKFDI------NKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQTACLEACKKLHQIG 86
TP++ I NK M C+L LP N P++ V+ N ++ A L+ C LH+
Sbjct: 644 TPEWSIQEMVVDNKFMYTCSLRLPINSPVKYVVLSYPMPNRAMARRMAALQLCIDLHRKN 703
Query: 87 ALTDNLLPDVVVEEHDAQKHGNEPYDAEHP 116
+ DNLLP + E A+ P DAE P
Sbjct: 704 EIDDNLLP-IGKENFKAK-----PEDAEVP 727
>gi|156368540|ref|XP_001627751.1| predicted protein [Nematostella vectensis]
gi|156214670|gb|EDO35651.1| predicted protein [Nematostella vectensis]
Length = 199
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 18/195 (9%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
++ E + Y F + L++ALTH SY + CYQRLEFLGDA+LD+L+T +Y++
Sbjct: 1 LQGFEKRIGYEFSNKLYLIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNT 60
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV------------ 714
L PG+LTD+R A VNN+ +A +VKHG +K + S E + I + V
Sbjct: 61 NLDPGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQ 120
Query: 715 DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
D F LS + G E+ PK LGDI ES++GAIF+DSG + + + +L+P I
Sbjct: 121 DPFLTLSNDDEEGIEA----PKVLGDIFESVAGAIFLDSGMDLVLTWRVYYRMLKPYIDA 176
Query: 775 ETMRL--QPARELNE 787
+ + P R ++E
Sbjct: 177 YSADVPKNPVRLIHE 191
>gi|295673975|ref|XP_002797533.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280183|gb|EEH35749.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1450
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKV 437
P C I P+ + F + PSI+H++++ L+A L +L ++ + V
Sbjct: 918 FPARDCSIDKLPLEYTMFALLS--PSIIHKVETYLIAEELNKTILSPVGFTDLNL----V 971
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
+ A+ +E + + +E LGDS LK+ S QL HEGLLS KD ++SN L
Sbjct: 972 ITALCAPDAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLS 1031
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
+ L FI + F W P N + D R+++ +KT+AD
Sbjct: 1032 YAAIETGLDKFIFVDIFTGVKWR-PLYNKAHVKEQD-----------IPRREMSTKTLAD 1079
Query: 558 VVEALIGAFLSTGG----ENVGLIFLDRIGIK--VDFVNVPYERQFQVQAERLVN-VRHL 610
V+EAL+GA GG E IFL I D +N Y +V + R +
Sbjct: 1080 VIEALLGAATIDGGQIKVEKCLKIFLPEIRWIPFADRLNALYNSVPEVYENLPTSWFRDI 1139
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
ESL+ Y+F L +A TH S P YQRLEFLGD++LD++I +L+N
Sbjct: 1140 ESLVGYTFNKKVFLAQAFTHPSN--PGSTMSYQRLEFLGDSILDHIIVDHLFNSPRNFPH 1197
Query: 671 GDLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHILHA-S 703
D+ MR++ N D A +++ K L +++ H S
Sbjct: 1198 VDMHLMRASLANADFLAFLCIGMTTDEERGEIVEASRNGTFTRMTTRKISLWQYMRHGTS 1257
Query: 704 QELYKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSGAIFVDS 753
EL TV+ ++ L + T ++P AL D+IES+ GAIF+DS
Sbjct: 1258 WELTVSQQQTVNQYQALKADITKALYEADTYPWALLSRLRAQKFFSDLIESVLGAIFIDS 1317
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQR+EFLGD++L + ++ L P G L++ + V+N + ++++ GL K I
Sbjct: 986 YQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETGLDKFIFV 1045
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
KW + + + ++ E S K L D+IE+L GA +D G
Sbjct: 1046 DIFTGVKWRPL----YNKAHVKEQDIPRREMS-TKTLADVIEALLGAATIDGG 1093
>gi|291000766|ref|XP_002682950.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
gi|284096578|gb|EFC50206.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
Length = 1386
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 182/784 (23%), Positives = 326/784 (41%), Gaps = 151/784 (19%)
Query: 37 PKFDINKE--MGICTLYLPNNCPIQTVI---------AQGNIKTL--KQTACLEACKKLH 83
PKF I + + + P NCP+ AQ + L K+ +A + LH
Sbjct: 552 PKFSIYADGPFFVTEITFPTNCPVPVFSISNNHEDDPAQYRLNKLVSKRYCAFKAVQLLH 611
Query: 84 QIGALTDNLLP---DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQ-----DTKITY 135
+ L D+L P V +A+ P + PE+ N + T
Sbjct: 612 KYKELDDSLFPRYSKYVFASTEAEFAS--PASMATLLPQMPEIFNWREKKLNSIQTDNPS 669
Query: 136 HCYLIELKQNFNYDI----PAHDIVLAVRTELESEIKKVNF-DLEVDRGRLTVNLKHLGK 190
HC I YDI A D + E++S+++++ + ++ GR + +K +
Sbjct: 670 HCVYI-------YDIFLDNNATDFQFIIPNEIDSDLEELGLLNFRMNGGR-HITIKKMES 721
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLLP--ASEQSID 248
+ D +L C + +F + + + R+ + + ++P A + ID
Sbjct: 722 TTVDNDYILKCFEYHEFMFNKVAKISFPDQKQ-------RNLQDWTFFIIPKQAQQHFID 774
Query: 249 WEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITG 308
PV + ++HH G ++ N ++ T ++ ++Y +
Sbjct: 775 V-PVLDI-------IQHH----------------GKEAENILKNMILETIYNHRVYLLQN 810
Query: 309 VLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNG---------------RR 353
+ N S F D YK +Y+E++G+++ Q+ LL +
Sbjct: 811 IEFDKNPKSHFDTEDFP--DYKTYYKEKWGLEIERPQQPLLRAYQPRFSTLGSTQVEHQN 868
Query: 354 IFHAQNYLSKCRQEKQREPSKISFELPPELCRII-MGPMSLSTFYSFTFVPSIMHRLQSL 412
IF +L+ C SF + E+ R + + P L +Y+ + SI + L
Sbjct: 869 IFLVPEFLTAC-----------SFTI--EMLRFLKLAPEFLYRYYN-RLITSIFSKQFEL 914
Query: 413 LLAVNLKNMLLDHCMQNVTIPTSKVLE-AITTKKCQEGFHLESLETLGDSFLKYAASQQL 471
+ +L D T+ ++LE A+T K+ Q G + E LE GDS LKY S+ +
Sbjct: 915 FQPIVDATLLED----GKTLEAFELLEEALTAKRSQVGANYEKLEFFGDSILKYIVSKHI 970
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL 531
+ + + G LS + + +SN L + + +LP FI TEP + + N G ++
Sbjct: 971 YHEFPLYSSGSLSQLQHKFVSNYFLASVARNTRLPLFIITEPLNTSQLV---QNIGGFKS 1027
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI--FLDRIGIKVDFV 589
N + +E I + + K +ADVVE++IG G ++ I FL +G+ +
Sbjct: 1028 NKFA--DETNI------EAEYKVLADVVESIIGFCYHIFGGSLEQINRFLGLVGVSLPKG 1079
Query: 590 NVPYERQFQVQAERLVNVRHLESL----------LNYSFRDPSLLVEALTHGSYMLPEIP 639
+ ++L+ H E L LN+ F + LL+EA H SY
Sbjct: 1080 EISGSEDI-FMNQKLLLRNHFEKLKIDLYKLTEKLNFQFENSGLLLEAFIHPSY---NGV 1135
Query: 640 RCYQRLEFLGDAVLDYLITVYLYNKY---PTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
Y+RLEFLGD+VL ++T ++ K+ + S G ++ +R V N +A +++ L
Sbjct: 1136 FNYERLEFLGDSVLGLIVTSKIFEKFHKNSSFSLGMMSKLREKIVMNKNFANLCIENQLQ 1195
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
+I+ + + + + + D E + K L D+ ESL+GA+FVDS +
Sbjct: 1196 NYIIFSGNHIAQQVVHSKDDGE---------------YVKMLSDVFESLAGALFVDSHYD 1240
Query: 757 KEVV 760
+ V
Sbjct: 1241 LDTV 1244
>gi|350423180|ref|XP_003493408.1| PREDICTED: endoribonuclease Dcr-1-like [Bombus impatiens]
Length = 1934
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 119/229 (51%), Gaps = 23/229 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE + Y F D S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1679 ELEKSIGYEFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDGRQH 1738
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
SPG LTD+RSA VNN +A +V+ G HK+ H S L +I ++ F R+ E+
Sbjct: 1739 SPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQQENGHSI 1794
Query: 729 ESE--------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
E PKALGD+ ESL+GAI++DSG + + V+ +++ I
Sbjct: 1795 SEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQ 1854
Query: 775 ETMRL--QPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTL 820
+ + P REL E + F + +A + VTV+V G+
Sbjct: 1855 FSTNVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFGKGSF 1901
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN
Sbjct: 1400 SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNL 1459
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG L + F+P W+ P
Sbjct: 1460 NLYRLGRQKMLGESMIATKFEPHDNWLPP 1488
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N++ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1391 LENHAGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1447
Query: 673 LTDMRSASVNN 683
L+ +RS V+N
Sbjct: 1448 LSHLRSKQVSN 1458
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 36 TPKFDI------NKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQTACLEACKKLHQIG 86
TP++ I NK M C+L LP N P++ V+ N ++ A L+ C LH+
Sbjct: 619 TPEWSIREMIVDNKFMYTCSLRLPINSPVKYVVLSYPMPNRAMARRMAALQLCIDLHRKN 678
Query: 87 ALTDNLLPDVVVEEHDAQKHGNEPYDAEHP 116
+ DNLLP + E A+ P DAE P
Sbjct: 679 EIDDNLLP-IGKENFKAK-----PEDAEVP 702
>gi|241061224|ref|XP_002408099.1| dicer-1, putative [Ixodes scapularis]
gi|215492368|gb|EEC02009.1| dicer-1, putative [Ixodes scapularis]
Length = 1348
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 163/372 (43%), Gaps = 81/372 (21%)
Query: 549 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD--------------------- 587
+V K+VAD VEALIGA+L G L + +G+++
Sbjct: 980 QVPDKSVADSVEALIGAYLLVCGPVGALKVMKWMGVRLTQCDLEGGAEGSGVRGFWGFPP 1039
Query: 588 -----FVNVPY-ERQFQVQAERLVN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 640
+VP+ E E + + V +E L Y+F D S L++A+TH SY +
Sbjct: 1040 PQTALLRHVPHPEEDLAALMELMADTVADVERALGYTFVDRSFLLQAVTHASYYRNRLTD 1099
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
CYQRLEFLGDAV+DYL+T YLY +PG LTD+RS+ VNN +A VK+GLH
Sbjct: 1100 CYQRLEFLGDAVIDYLVTRYLYELPRKFNPGQLTDLRSSLVNNTFFASLVVKYGLHGCFK 1159
Query: 701 HASQELYKWINITV-------------------DSFERLSLESTF----GWESETSF--- 734
H + L+ I V D ER G E +T +
Sbjct: 1160 HCNPSLFSAIGRFVNYQAQAREEEREEGELPDEDREERQEFPDLNAPLDGAEDDTYWKVL 1219
Query: 735 ------------------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--P 774
PKALGD+ ESL GA+F+D G + + V+ I + I
Sbjct: 1220 ERHYCHEEECQEPEEVEVPKALGDLFESLMGAVFLDCGMSLDRVWRIIYRMFGQEIESFS 1279
Query: 775 ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ + + P +EL E + F + + G V V++ G F + +K+ AK
Sbjct: 1280 QNVPVPPVKELTERFRDARFGPAELL-----GNNKVKVQLTVTGKTF--SCVAKNKKLAK 1332
Query: 835 KVASKEVLKSLK 846
+K+ L+ +K
Sbjct: 1333 MALAKKCLRMVK 1344
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 23 SDYLLMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKT---LKQTACLEAC 79
SD L+ + P +KE +CT+YLP P++ I ++T K A LE C
Sbjct: 630 SDIFTRLQPDYTILPVNREDKEYYVCTVYLPMTSPLKEPIQGQPMETKRYAKMAAALETC 689
Query: 80 KKLHQIGALTDNLLP 94
K+LHQ+G L DNLLP
Sbjct: 690 KRLHQMGELDDNLLP 704
>gi|240255863|ref|NP_680697.4| protein RNAse II-like 1 [Arabidopsis thaliana]
gi|332658200|gb|AEE83600.1| protein RNAse II-like 1 [Arabidopsis thaliana]
Length = 264
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
++L+ + LE +LNY F+D SLL++A T SY + + Y+ LE LGD++L+ I
Sbjct: 24 DQLMEIESLEKILNYKFKDKSLLLKAFTDASY-VDDKSESYELLELLGDSILNMGIIYDF 82
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
YP +PG LT +R+ +V+ + A +V H L+ ++ H L + I V++ E+
Sbjct: 83 IKLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYP 142
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQ 780
L S PK L DI+ES GAIF+D CN E V++ I+PLLEP+I + M+
Sbjct: 143 LHSN----GLLKVPKVLADIVESTIGAIFMD--CNSTETVWKVIKPLLEPIIHLDKMKSH 196
Query: 781 PARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKE 840
P ELNE CQK + + N +E G H KETA+ A+K
Sbjct: 197 PMTELNEMCQKRNLKLTSKDTWEENQTYCFHIEDKFVGC----GHHPVKKETARNFAAKN 252
Query: 841 VLKSLKASF 849
+ + F
Sbjct: 253 AIDNFAKFF 261
>gi|393238576|gb|EJD46112.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1427
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 51/404 (12%)
Query: 432 IPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
I + ++EA T GF + LETLGD+FLK S F + HEG L+ + I
Sbjct: 953 IELNALIEATTLPPAMMGFDNQRLETLGDAFLKLGVSVYAFHAFPFKHEGQLTNVRIPSI 1012
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVK 551
SN +L R F+ + ++ S E++ ++ R G+ ++
Sbjct: 1013 SNKSL-----------LARARAFNLQRYL-------SVEVSSRRKWSPR--LTNGKVEMP 1052
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN----- 606
+++ + VEAL+GA ++GG L +G K+ P ++ + ER V
Sbjct: 1053 RRSMQECVEALLGAAFASGGVPCALA----VGGKLGLCFGPPDKLW---TERYVKPVPSP 1105
Query: 607 -----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+ L+ L + F + +LL+EA+TH S E P Y+RLEFLGDA+LD + YL
Sbjct: 1106 LRRPLLHELQQRLGHEFANETLLLEAVTHRSMQSSETP-SYERLEFLGDALLDMAVMQYL 1164
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSFERL 720
+ KYP + G L+ R +V N A +++ + +H+ +L EL K I+ +
Sbjct: 1165 FKKYPQATCGQLSWARQRAVCNSTLAWIAATRLHVHECLLQNHIELAKVIDAARQELIEM 1224
Query: 721 SLESTF--GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP---MITPE 775
S E GW+ + PK GD++E++ A+F+D G + E I ++ +++P+
Sbjct: 1225 SAEQVIRDGWKMD--MPKPPGDLVEAVFAAMFIDMGHDYERAAARICAVIRDVLVLLSPD 1282
Query: 776 TMRLQPARELNEYCQKH---HFSMKKTVAPRINGK-AAVTVEVH 815
R P+ EL Y ++ +K+ + G+ ++TV VH
Sbjct: 1283 MPR-DPSTELMLYIGRYGCMQVKYRKSASDPDGGRNDSMTVVVH 1325
>gi|449295521|gb|EMC91542.1| hypothetical protein BAUCODRAFT_570103 [Baudoinia compniacensis UAMH
10762]
Length = 1569
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 185/426 (43%), Gaps = 63/426 (14%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
L PE RI P +++T S P+I+HRL+S L+A+ M+ C + L
Sbjct: 1004 LCPEPLRISALPPAVAT--SCFAWPAIIHRLESYLIALEASKMIGVDCSPQM------AL 1055
Query: 439 EAITTKKCQEGFH---------------LESLETLGDSFLKYAASQQLFKTYQNHHEGLL 483
A+T G H E LE +GD+FLK A S F N +E
Sbjct: 1056 AAMTKDSDNSGDHDKQEHINFQHGMGENYERLEFIGDTFLKTATSISTFIQNPNDNEFEF 1115
Query: 484 SVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIY 543
VK+ ++ N L + + KL ++R+ F ++W G +L + N+++
Sbjct: 1116 HVKRMLMLCNQNLFNVAKELKLYEYVRSIAFSRRLWYPEG-----LKLLEGKGANKQEET 1170
Query: 544 VTGRKKVKSKTVADVVEALIGAF-------------------------LSTGGENVGLIF 578
+ + KT+ADV EALIGA L ++ L +
Sbjct: 1171 SVIKHSLGEKTIADVCEALIGAAYVTHDRPGDQWQPSHWENAVRAVTRLVNSADHTMLTW 1230
Query: 579 LDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLP 636
D I P + +V A + +E Y F+ P LL A H S M
Sbjct: 1231 SDYIAA----YEKPSYQTGEVSASQRDLAEKVEREHPYHFKYPRLLRSAFIHPSQPVMYE 1286
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
++P YQRLEFLGDA+LD YL+++YP P LT+ + A V+N V G H
Sbjct: 1287 KVPN-YQRLEFLGDALLDMASIAYLFHRYPDRDPQWLTEHKMAMVSNKFLGAVCVNVGFH 1345
Query: 697 KHILHASQELYKWI---NITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDS 753
H+ H+S L I I + +R++ ++ W + + PK L DI+E+ GA F+DS
Sbjct: 1346 LHLRHSSAILQHQIADYAIELLETKRVAGDAKDYWTTVSDPPKCLPDIVEAYVGAAFIDS 1405
Query: 754 GCNKEV 759
+ V
Sbjct: 1406 NFDYNV 1411
>gi|298711900|emb|CBJ48587.1| dicer-like 3 [Ectocarpus siliculosus]
Length = 1557
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 68/351 (19%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNH----HEGLLSVKKDRIISNAALCKLGCDHKL--- 505
E LETLGD++L Y A F +Q+ EG++++ + ++SNA L K L
Sbjct: 1165 ERLETLGDAWLNYYAG---FVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREF 1221
Query: 506 ---PGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEAL 562
P I PFD MW + + + K KT+ADVVEAL
Sbjct: 1222 MYPPRSILGRPFD--MW------------------SPSLLPLPPPVKASKKTIADVVEAL 1261
Query: 563 IGAFLSTGGENVGLIFLDRIGIKVDFVN--------------VPYERQFQVQAERLV-NV 607
+GA L GG ++ +G+ +P + RL+ N+
Sbjct: 1262 LGAALVAGGNRSAAYIMEWLGLAAASAAATAAAAGEDPAAPPLPEVYVATKPSARLMGNI 1321
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIP------RCYQRLEFLGDAVLDYLITVYL 661
R LE L Y+FR P L ++A+TH S+ + +IP + YQRLEFLGDAVL +++T +L
Sbjct: 1322 RLLEKRLGYTFRYPWLCMQAITHPSWTINDIPPGTVPAQDYQRLEFLGDAVLGWMVTAHL 1381
Query: 662 YNKYPTLSPGDLTDMR--SASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
Y +P +LT ++ S+ V N + +++ +H H+L AS ++ I+ +++
Sbjct: 1382 YFASSAFTPAELTRIKVTSSCVCNASLWVIALRLDVH-HVLRASPKILGHIHAFIEN--- 1437
Query: 720 LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGC--NKEVVFESIRPLL 768
G + PK D++E+L GA+F+DS C N ++ E P +
Sbjct: 1438 ------NGVSGTGTAPKHPADVLEALIGAVFIDSSCCMNASLLLEGAPPRM 1482
>gi|414453403|gb|AFX00003.1| Dicer [Mnemiopsis leidyi]
Length = 2002
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 67/355 (18%)
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------DFVNVPYER-- 595
+++ +K VAD +EAL+G ++ G G+ LDRI + D N Y++
Sbjct: 1642 QEMGTKDVADSMEALLGLCVARYGYRKGVDLLDRIKVTTFQAQSEAEPDDLNNHLYKQTP 1701
Query: 596 ----------QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 645
++ R N+R +E + Y F++P L+EALTH S+ EI CYQRL
Sbjct: 1702 PSQISNLNPVAIRLARSRCDNLRTVEKAIGYEFKEPLYLLEALTHASFT--EIDACYQRL 1759
Query: 646 EFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE 705
EFLGDAVLD L+ +Y +P G +TD+ S+ V N + K LHK +L+ S E
Sbjct: 1760 EFLGDAVLDVLMVFRIYEDHPEYDQGQMTDLLSSLVCNTTLSKVCTKLQLHKSLLYDSAE 1819
Query: 706 LYK-----WINITVDSFER----LSLESTF--GWESET--------------SFPKALGD 740
L+ ++N D E+ LSLE F + +T PK LGD
Sbjct: 1820 LFNVLAGFFMNFEKDQLEQWCKDLSLERVFVDTVDCDTPDKIPILNLDNKVVQAPKLLGD 1879
Query: 741 IIESLSGAIFVDSGCNKEV--VFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSM 796
++ES+ GAI++D C++++ V+E I P EP T + + P +NE + ++
Sbjct: 1880 LVESVIGAIYLD--CDEDILRVYEVIWPWFEPFYTAFSKNVPKNPKAMINEL---YSGAI 1934
Query: 797 KKTVA--PRINGKAAVTVEV-------HANGTLFKHTHADADKETAKKVASKEVL 842
KK++ P + ++ TV + T + D+ETA +V+ L
Sbjct: 1935 KKSIVSYPGDHYRSIATVSISIRHDDDQNKATTYTFKTVGRDRETAMEVSYGRAL 1989
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 133/580 (22%), Positives = 224/580 (38%), Gaps = 92/580 (15%)
Query: 9 CSFIQSRGRARMQNSDYLLMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIA---QG 65
CS + + SDY + R FK T+ LP CP++ I
Sbjct: 997 CSQLPKDDYTDVMPSDYTIEDARGFK-------------TTITLPKLCPVKIPIEGQYMS 1043
Query: 66 NIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDA---QKHGNEPYDAEHPIYFPPE 122
N K K +A ++ + L+ LTD LLP +E + Q + + P
Sbjct: 1044 NKKLAKMSAAMKTLEFLYSANELTDTLLPKFRQKEVNPLLIQSESGRSLTVDQKLKIPSA 1103
Query: 123 LVNQCPQDTKITYHCYLIEL-----KQNFN-YDIPAHDIVLAVRTEL--ESEIKKVNFDL 174
+ ++ ++ Y I L NF+ Y + D +A L E + F +
Sbjct: 1104 FWRRDLKEASGKFYLYSIRLHLIPNDPNFDEYFVDGKDHKVACFGILCKERLPQFPLFTV 1163
Query: 175 EVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLE 234
G +TVN++ + + + FQ ALF ++D LN + K D +
Sbjct: 1164 YPRFGSVTVNIQFERAVTVPIHVLQSYYWFQEALFTHLLD-----LNHVTKS---SDAIF 1215
Query: 235 IDYLLLPASEQSIDWEPVASLSFPC--DIGLKH----HKNCSTMSNARVVQTKSGPLCTC 288
Y +LP +S + +S C DI + HK +N + L C
Sbjct: 1216 KSYFILPLCWKSKGLQFRSSDKKSCFLDIDSRFIAQLHKQWDYETNRWIFGNMPDDLDKC 1275
Query: 289 M------IYNSVV---CTPH-SGQIYYIT-----GVLGHLNANSLFTRNDGGAITYKKHY 333
+ YN + C + SG Y + + S+ +D TY++++
Sbjct: 1276 LDSVIFPAYNKDLRNQCNKNLSGYFYAVIRKSELTPKDKMRGRSVKNPDDLETQTYEEYH 1335
Query: 334 EERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSL 393
++ I+L + LL R + +L++ +K P L E+ ++ PM
Sbjct: 1336 YAKHDIKLVHPTKNLLECRNVTRHYAFLTEHASKKLNRPPMF---LIGEIHQV--HPMPS 1390
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS------------------ 435
S + T +PSI+ R+++ L+ L + + C + + S
Sbjct: 1391 SLWSQATCLPSILWRIETFCLSNELTDNVYKGCNLKIDLLASHESNYFNERTDNLMARLR 1450
Query: 436 ------------KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLL 483
+ L +IT K C E ++LE LE LGD FLK+ ++ ++T + HEG L
Sbjct: 1451 RDLEYKGDIDWFETLHSITHKSCGEEYNLERLEFLGDRFLKFVSTLYYYRTMPDKHEGWL 1510
Query: 484 SVKKDRIISNAALCKLGCDH-KLPGFIRTEPFDPKMWMIP 522
S + +ISN L C +LP +I + DPK IP
Sbjct: 1511 SRYRSEMISNQNLAVRSCKEIELPRYILNKKVDPKSNWIP 1550
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLHKHILH 701
+RLEFLGD L ++ T+Y Y P G L+ RS ++N A+ S K L ++IL+
Sbjct: 1480 ERLEFLGDRFLKFVSTLYYYRTMPDKHEGWLSRYRSEMISNQNLAVRSCKEIELPRYILN 1539
>gi|303315249|ref|XP_003067632.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107302|gb|EER25487.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1448
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 183/420 (43%), Gaps = 66/420 (15%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P C + P+ S F F+P ++H +++ +A L +L N+++ VL
Sbjct: 923 PANNCSVDRLPVEYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VL 976
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
AI++ +E + + LE LGDS LK S QL + EG L+++K ++SN L
Sbjct: 977 TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLAN 1036
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
L FI T+PF W P N+ D + +++ +K +ADV
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWR-PSYNTDHINTGDMT---------EPTREMSTKVLADV 1086
Query: 559 VEALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYERQFQVQAERLVNVRHLES 612
VEALIGA GGEN L IF+ I + VN+ + +Q E + +E
Sbjct: 1087 VEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQQDSFSDENNNMLSEIEG 1146
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ Y+F+ LL+ A+TH S YQRLEF+GD++LD ++ L+ D
Sbjct: 1147 LVGYTFKKKPLLLAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRGFHHFD 1204
Query: 673 LTDMRSASVNND----------------------------------CYALSSVKHGLHKH 698
+ MR+A VN D Y +KH
Sbjct: 1205 MHLMRTALVNADFLAFLCMNAYREEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWD 1264
Query: 699 ILHASQEL---YKWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
I++A Q Y+ ++ +D E+L T+ W K DI+ES+ GAIF+DS
Sbjct: 1265 IVNAQQRAAKQYEKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLANAALQTGLDKFILT 1049
Query: 702 ASQELYKW--------INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDS 753
KW IN T D E ST K L D++E+L GA +D
Sbjct: 1050 KPFTGAKWRPSYNTDHIN-TGDMTEPTREMST----------KVLADVVEALIGAANIDG 1098
Query: 754 GCNK 757
G NK
Sbjct: 1099 GENK 1102
>gi|391348710|ref|XP_003748587.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1732
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 166/348 (47%), Gaps = 43/348 (12%)
Query: 531 LNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI------ 584
L D L + V K+K DVVEAL G +L G L F IG+
Sbjct: 1351 LQDDQLPLRHDVPVRSFHDFKAKVGGDVVEALAGTYLEQCGPIGALRFFRWIGMDLGDTE 1410
Query: 585 --------KVDFV---NVPYE--RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHG 631
K+DF N+P E + +Q E++ E ++++F+ L+++A+TH
Sbjct: 1411 SNNFLDAFKLDFSAAQNIPAECLKSYQYLIEKV------EKQIDFTFKSKGLVLQAITHH 1464
Query: 632 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSV 691
S + Y RL F+G+AV DYL+T+Y+Y L PG L+D+RSA +NN A + V
Sbjct: 1465 SCRDHLLTEDYNRLAFIGEAVADYLLTLYIYGLSSNLDPGQLSDLRSALINNQVTAYAVV 1524
Query: 692 KHGLHKHILHASQELYKWINITVDSFER--LSLESTFG-WES----ETSFPKALGDIIES 744
+ LH +L+ + +L+ I +++ + L L + G WE+ E P+ L I++S
Sbjct: 1525 RAELHTVLLYTNSKLFSAIRKYLENIDDIGLRLNTVLGDWETDDAEEAEVPRPLARILQS 1584
Query: 745 LSGAIFVDSGCNKEVVFESIRPLLEPMITPETM---RLQPARELNEYCQKHHFSMKKTVA 801
+ GA+F+DSG + FES+ +L ++ E R P E C+K ++
Sbjct: 1585 ILGAVFIDSGKS----FESVWRILVRIMGHEIALFSRNVPIPPTTELCKKFPGTVFSKAV 1640
Query: 802 PRI----NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
P + GK V + V NG ++ +K+ AK +K L+ +
Sbjct: 1641 PILEGEDEGKFEVKLTVSRNGKTETYSQIAENKKIAKTTLAKRYLRKV 1688
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 27 LMLKRYFKPTPKFDINKEMG--ICTLYLPNNCPIQTVIAQG-----NIKTLKQTACLEAC 79
M +Y P FD + G ICTL +P CP++ ++ + K LE C
Sbjct: 669 FMRMKYPNVFPFFDFEETAGGYICTLTMPIVCPLREKVSNATRPFESKDKAKMFVALEMC 728
Query: 80 KKLHQIGALTDNLLP 94
K+LH G L+DNLLP
Sbjct: 729 KRLHACGELSDNLLP 743
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+++A+TTK QE F LE LE LGDSFL+ A+ + N L+V + ++N L
Sbjct: 1198 IMKALTTKASQEVFDLERLELLGDSFLQIVATFSVLDRNPNMSISELNVLRQYEVNNRHL 1257
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIP 522
D KL + PF +P
Sbjct: 1258 LCRAHDKKLTSVLEAYPFKATHNFLP 1283
>gi|451850832|gb|EMD64133.1| hypothetical protein COCSADRAFT_142297 [Cochliobolus sativus ND90Pr]
Length = 1435
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 186/407 (45%), Gaps = 57/407 (14%)
Query: 400 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK---VLEAITTKKCQEGFHLESLE 456
+ PSI H+L++ ++A L+ +L Q+V I S +L A+T + + LE
Sbjct: 918 SLFPSITHKLETYMVANALRTTVL----QSVNIDISHLPIILLALTPSAVDGEENYQRLE 973
Query: 457 TLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP 516
LGD LK+ S L T+ EG+L+ KK +++SN L + L FI + F
Sbjct: 974 FLGDCILKFITSLHLMATHLRMPEGMLTGKKSKLVSNGYLARAALAKGLDEFILYKRFTG 1033
Query: 517 KMWMIPGDNSGSYELNDHSLFNERKIYVT---GRKKVKSKTVADVVEALIGAFLSTGGEN 573
W + + + +T +++ SK +ADV+E+LIGA GG +
Sbjct: 1034 AKW--------------KPRYVSQVLAITNPPAKQEKSSKLIADVIESLIGASYVVGGFS 1079
Query: 574 VGLIFLDRIGIKVDFVNVPYERQFQVQA----ERLVNVRHLESLLNYSFRDPSLLVEALT 629
+ + D++ +P A + ++ V +E+L+ + F + ++L+EALT
Sbjct: 1080 KAFACVKALLPLEDWMPIPQANDTLYNAAPEQDSVMGVIPVENLVGHIFNNKAMLLEALT 1139
Query: 630 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
H ++ Y+R EFLGDAVLDY+++ LY+ P L + +R+A VN A S
Sbjct: 1140 HPTFRGLNTHCSYEREEFLGDAVLDYIVSKRLYSHRPELPHHKMHGIRTAMVNASFLAYS 1199
Query: 690 -------------------SVKHGLHKHILHASQELYKWINITVDSF--------ERLSL 722
+ + L + + S EL N+ + E L
Sbjct: 1200 MFETTVEEIFTNKETLQPETHQRALWQFLRSTSHELVMSRNLAIRRHSEARIQITEALQH 1259
Query: 723 ESTFGWE--SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
++ F W S T PK L DI+ES+ GA+++DS + V E +R L
Sbjct: 1260 DARFPWHALSLTDPPKFLSDIVESMIGALYIDSHGSLPVCEEFVRRL 1306
>gi|452839019|gb|EME40959.1| hypothetical protein DOTSEDRAFT_56023 [Dothistroma septosporum NZE10]
Length = 1549
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 213/477 (44%), Gaps = 71/477 (14%)
Query: 329 YKKHYEERYGI----QLCFDQELLLNGRRIFHAQNYLSKCRQEKQR----EPSKISFELP 380
+KK +ER Q + E +L R+ A L + RQ+ + +P +IS +P
Sbjct: 950 WKKARQERDATWSREQPVIEAEKILTQRKNMLAPPELKEVRQDTKAFLCVQPLRIS-TIP 1008
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT------ 434
PE + P+ + P+I++R +S L++ N++ C +
Sbjct: 1009 PE----VAAPLFI--------WPAIIYRFESHLISQEGCNVVGVDCGPEFALAAFTKDSD 1056
Query: 435 ----SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
+V E + ++ G + E E +GD+FLK A + F N +E V++ +
Sbjct: 1057 NSGEHEVEERVNFQRGM-GENYERFEFIGDTFLKTATTLSTFILNPNENEFEFHVRRMLM 1115
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTG 546
+ N L + KL +IR+ PF+ ++W G +G + + ++++ + + G
Sbjct: 1116 LCNKNLFQTAMGLKLYEYIRSLPFNRRLWYPEGMKLLAGTGVVKGEEKVMWHQPRDHPLG 1175
Query: 547 RKKVKSKTVADVVEALIGA---------------FLSTGGENVGLIFLDRIGI------K 585
KT+ADV EALIGA + S L+ D + K
Sbjct: 1176 -----EKTIADVCEALIGAAFIAHDCPGDWKPEHWESAIRAVTKLVNNDDHKMQTWEDYK 1230
Query: 586 VDFVNVPYERQFQVQAER-LVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCY 642
+ Y+ Q ++ L + LE L Y F+ P LL A H S +M ++P Y
Sbjct: 1231 AAYAKPAYQMQEATAVQKDLADKVELEHL--YRFQYPRLLYSAFVHPSLPFMYEKVPN-Y 1287
Query: 643 QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA 702
QRLEFLGDA+LD YL+ KYP P LT+ + A V+N V G HKH+ H
Sbjct: 1288 QRLEFLGDALLDMASISYLFYKYPDKDPQWLTEHKMAMVSNKFLGALCVNIGFHKHLRHH 1347
Query: 703 SQELYKWIN---ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
+L + I + +R++ +S W + + PK L DIIES GA+F+DS N
Sbjct: 1348 HAKLEHQVREYAIELLEAKRVAGDSRDYWTTVSDPPKCLPDIIESYVGALFIDSDFN 1404
>gi|119190771|ref|XP_001245992.1| hypothetical protein CIMG_05433 [Coccidioides immitis RS]
Length = 1435
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 182/420 (43%), Gaps = 66/420 (15%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P C + P+ S F F+P ++H +++ +A L +L N+++ VL
Sbjct: 923 PANNCSVDRLPVEYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VL 976
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
AI++ +E + + LE LGDS LK S QL + EG L+++K I+SN L
Sbjct: 977 TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLAN 1036
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
L FI T+PF W P N+ D +++ +K +ADV
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWR-PSYNTDHINTGD---------MTEPTREMSTKVLADV 1086
Query: 559 VEALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYERQFQVQAERLVNVRHLES 612
VEALIGA GGEN L IF+ I + VN+ + ++ E + +E
Sbjct: 1087 VEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQEDSFSDENNNMLSEIEG 1146
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ Y+F+ LL+ A+TH S YQRLEF+GD++LD ++ L+ D
Sbjct: 1147 LVGYTFKKKPLLLAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRCFHHFD 1204
Query: 673 LTDMRSASVNND----------------------------------CYALSSVKHGLHKH 698
+ MR+A VN D Y +KH
Sbjct: 1205 MHLMRTALVNADFLAFLCMNAYREEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWD 1264
Query: 699 ILHASQEL---YKWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
I++A Q Y+ ++ +D E+L T+ W K DI+ES+ GAIF+DS
Sbjct: 1265 IVNAQQRAAKQYEKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFILT 1049
Query: 702 ASQELYKW--------INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDS 753
KW IN T D E ST K L D++E+L GA +D
Sbjct: 1050 KPFTGAKWRPSYNTDHIN-TGDMTEPTREMST----------KVLADVVEALIGAANIDG 1098
Query: 754 GCNK 757
G NK
Sbjct: 1099 GENK 1102
>gi|442570278|sp|Q1DW80.3|DCL2_COCIM RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|392868830|gb|EAS34630.2| dicer-like protein 2 [Coccidioides immitis RS]
Length = 1435
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 183/420 (43%), Gaps = 66/420 (15%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P C + P+ S F F+P ++H +++ +A L +L N+++ VL
Sbjct: 923 PANNCSVDRLPVEYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VL 976
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
AI++ +E + + LE LGDS LK S QL + EG L+++K I+SN L
Sbjct: 977 TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLAN 1036
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
L FI T+PF W P N+ D + +++ +K +ADV
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWR-PSYNTDHINTGDMT---------EPTREMSTKVLADV 1086
Query: 559 VEALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYERQFQVQAERLVNVRHLES 612
VEALIGA GGEN L IF+ I + VN+ + ++ E + +E
Sbjct: 1087 VEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQEDSFSDENNNMLSEIEG 1146
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ Y+F+ LL+ A+TH S YQRLEF+GD++LD ++ L+ D
Sbjct: 1147 LVGYTFKKKPLLLAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRCFHHFD 1204
Query: 673 LTDMRSASVNND----------------------------------CYALSSVKHGLHKH 698
+ MR+A VN D Y +KH
Sbjct: 1205 MHLMRTALVNADFLAFLCMNAYREEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWD 1264
Query: 699 ILHASQEL---YKWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
I++A Q Y+ ++ +D E+L T+ W K DI+ES+ GAIF+DS
Sbjct: 1265 IVNAQQRAAKQYEKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFILT 1049
Query: 702 ASQELYKW--------INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDS 753
KW IN T D E ST K L D++E+L GA +D
Sbjct: 1050 KPFTGAKWRPSYNTDHIN-TGDMTEPTREMST----------KVLADVVEALIGAANIDG 1098
Query: 754 GCNK 757
G NK
Sbjct: 1099 GENK 1102
>gi|195124758|ref|XP_002006854.1| GI21295 [Drosophila mojavensis]
gi|193911922|gb|EDW10789.1| GI21295 [Drosophila mojavensis]
Length = 1728
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 216/551 (39%), Gaps = 136/551 (24%)
Query: 422 LLDHCMQNVTIPTSK---VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNH 478
+L H + N I ++ L AIT + F +E E LGD FLK +A+ L Y +
Sbjct: 1183 VLQHSISNDHITPAEQGEYLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANRYPDW 1242
Query: 479 HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKM-WMIPG------------DN 525
+EG+L+ K ++SN L + +P I + F PK W+ P +N
Sbjct: 1243 NEGILTQVKSTLVSNRNLLYCLSETDIPQRICSTLFTPKYSWLPPSVSLPQNVKALWKEN 1302
Query: 526 SG-----------SYELNDHSLFNERKI------------------------------YV 544
G + +++ LF + +
Sbjct: 1303 PGVAALVGPHNLRNLSISEEELFGDGNCGKQSFINFVNGCQANQQSHHAGLDYSSEINFC 1362
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYER--QFQVQAE 602
G+ ++ K +AD +EA++G + G + G L+ GI P + Q+
Sbjct: 1363 LGQVQMPDKLIADTLEAILGVVVKNYGLHHGFRMLEYFGICKPDNGKPLTQLLDLQLGGS 1422
Query: 603 R-------------LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 649
R L+N ++LE L Y+F D + L++ALTH S + CYQ LEF+G
Sbjct: 1423 RMRTNISQHEVDGFLINHQYLEKNLGYTFCDRAYLLQALTHPSNPTNRLTGCYQELEFIG 1482
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
DA+LD+LI+ Y++ ++PG LTD+RSA VNN A V+H H IL + L +
Sbjct: 1483 DAILDFLISAYIFEHKTRMTPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLSES 1542
Query: 710 INITV----------------------------DSFERLSLE------------------ 723
I V DS E L +
Sbjct: 1543 IQNFVQFQETQNHRVTNHVRILMEEKDVQPEPLDSDEELEMAELAAKQAKPAIREADAPK 1602
Query: 724 -STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT--PETMRLQ 780
F PKALGD++E+L A+++D + ++ + L EP + + L
Sbjct: 1603 VGEFNISHNVDVPKALGDVLEALIAAVYLDCR-DLNTTWQVVYKLFEPELLEFSRNVPLN 1661
Query: 781 PARELNEYCQKHHFSMKKTVAPRINGKAAV----------TVEVHANGTLFKHTHADADK 830
P R+L E H + +P ++ + T++V+ G K A K
Sbjct: 1662 PIRQLFE----HKLAKPTFSSPVMDNNQVMVTCQFICMDKTIKVYGFGNNGKQAKLSAAK 1717
Query: 831 ETAKKVASKEV 841
+K+A E
Sbjct: 1718 HALQKLAKCEA 1728
>gi|320035561|gb|EFW17502.1| RNA helicase/RNAse III [Coccidioides posadasii str. Silveira]
Length = 1448
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 185/420 (44%), Gaps = 66/420 (15%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P C + P+ S F F+P ++H +++ +A L +L N+++ VL
Sbjct: 923 PANNCSVDRLPVEYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VL 976
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
AI++ +E + + LE LGDS LK S QL + EG L+++K ++SN L
Sbjct: 977 TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLAN 1036
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
L FI T+PF W P N+ DH N + R ++ +K +ADV
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWR-PSYNT------DH--INTGNMTEPTR-EMSTKVLADV 1086
Query: 559 VEALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYERQFQVQAERLVNVRHLES 612
VEALIGA GGEN L IF+ I + VN+ + +Q E + +E
Sbjct: 1087 VEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQQDSFSDENNNMLSEIEG 1146
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ Y+F+ LL+ A+TH S YQRLEF+GD++LD ++ L+ D
Sbjct: 1147 LVGYTFKKKPLLLAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRGFHHFD 1204
Query: 673 LTDMRSASVNND----------------------------------CYALSSVKHGLHKH 698
+ MR+A VN D Y +KH
Sbjct: 1205 MHLMRTALVNADFLAFLCMNAYREEDRGEAVENSKTRVTVAMTKRRAYLWGFMKHSASWD 1264
Query: 699 ILHASQEL---YKWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
I++A Q Y+ ++ +D E+L T+ W K DI+ES+ GAIF+DS
Sbjct: 1265 IVNAQQRAAKQYEKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLANAALQTGLDKFILT 1049
Query: 702 ASQELYKWI-NITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
KW + D ++ + K L D++E+L GA +D G NK
Sbjct: 1050 KPFTGAKWRPSYNTDHINTGNMTEP----TREMSTKVLADVVEALIGAANIDGGENK 1102
>gi|258565145|ref|XP_002583317.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907018|gb|EEP81419.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1194
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 179/424 (42%), Gaps = 74/424 (17%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLE 439
P C I P+ + F F+P ++H ++ L+A L +L + S VL
Sbjct: 681 PASECTIDKLPIQYTRFT--LFIPCLIHNIEKTLIADELARTILRPVKFS---DLSLVLT 735
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AI++ +E + + LE LGDS LK S +L EGLL+ +K ++SN+ L K
Sbjct: 736 AISSSVAREASNYQRLEFLGDSLLKLYTSIELAAKNLQWPEGLLTSRKSHVVSNSHLAKA 795
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS-KTVADV 558
+ L FI T+PF W P N+ D G +V S K +ADV
Sbjct: 796 ATETGLDRFILTKPFSGAKWR-PSYNTDHVHAGDEE----------GSPRVMSTKVLADV 844
Query: 559 VEALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYERQFQVQAERLVNVRHLES 612
VEALIGA G + L +FL I + V + Y E + + +E
Sbjct: 845 VEALIGAANIDGADEKTLDCLKVFLPEINWSPLDESVGLLYRNATDSGDEYSMVLPEIEE 904
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
LL Y+F SL++ ALTH S YQRLEF+GD+VLD ++ L+ + +
Sbjct: 905 LLGYTFTKKSLVLAALTHPSSTTSR--HSYQRLEFIGDSVLDIIVVQALFGSPREFAHYN 962
Query: 673 LTDMRSASVNNDCYAL----------------------------------SSVKHGLHKH 698
+ MR+A VN D A +KH
Sbjct: 963 MHLMRTALVNADFLAFLCMNVYVEKDRGEAVENIKKKVKIEMTKRKSHLWGFMKHSQSWD 1022
Query: 699 ILHAS-------QELYKWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAI 749
I+HA +EL + IN ERL+ ++ W K DIIES+ GAI
Sbjct: 1023 IVHAQNSAIKQHEELQEEIN------ERLNSSQSYPWTLLCRLDAAKFFSDIIESILGAI 1076
Query: 750 FVDS 753
F+DS
Sbjct: 1077 FIDS 1080
>gi|158706455|sp|Q2H0G2.2|DCL1_CHAGB RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1607
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 199/476 (41%), Gaps = 96/476 (20%)
Query: 378 ELPPELCRIIMGPMSLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQN 429
+L P+ C I++ P+ +S Y+F P+IMHR+ S L+A+ ML N
Sbjct: 1023 DLEPKPCFIVLEPLRISPLPVDLVAMAYNF---PAIMHRIDSNLVALEACKML------N 1073
Query: 430 VTIPTSKVLEAITTKKCQEGFH--------------LESLETLGDSFLKYAASQQLFKTY 475
+ + LEA T G H E LE LGD FLK A + +F
Sbjct: 1074 LNVRPDLALEAFTKDSDNSGEHDAEQISFQSGMGNNYERLEFLGDCFLKMATTISIFTLI 1133
Query: 476 QNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHS 535
+ E V++ +I N L + KL IR+ FD + W G +
Sbjct: 1134 PDKAEFEYHVERMLLICNRNLFNNALEVKLEEHIRSMAFDRRSWYPEG----------LT 1183
Query: 536 LFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN-----------VGLIFLDRIGI 584
L ++ +T + + KT+ADV EALIGA T E V ++ D+
Sbjct: 1184 LKKGKRKDLTRQHVLADKTIADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDKNHT 1243
Query: 585 KVDFVNV------PYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLP 636
+ + P + + +L E+ + Y+F P LL A H +Y +
Sbjct: 1244 MTSYSDYYAAYSPPAWQTAPCNSTQLDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYE 1303
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
++P YQRLEFLGDA+LD +L++++P P LT+ + A V+N +V G H
Sbjct: 1304 KLP-SYQRLEFLGDALLDMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYLGFH 1362
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESET-----------------SF----- 734
+ I + + + K I V E +L+S S+T SF
Sbjct: 1363 RAISYCASAIQKEITEYVTEIED-ALQSARDDASKTPCNRHATTPSPGDLPAESFARDFW 1421
Query: 735 ------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP--ETMRLQPA 782
PK L D++E+ GA+FVDS + F +R + P E MRL A
Sbjct: 1422 VRCSRPPKCLPDVVEAYVGAVFVDSRYD----FARVRAFFADHVRPFFEDMRLYDA 1473
>gi|357462179|ref|XP_003601371.1| Ribonuclease 3-like protein [Medicago truncatula]
gi|355490419|gb|AES71622.1| Ribonuclease 3-like protein [Medicago truncatula]
Length = 322
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 8/193 (4%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +L Y F++ LL EALTH +Y Y+RLE++GDAVL+ L+ + YP L
Sbjct: 72 VEEILGYEFKNKQLLEEALTHTTYG---AENDYERLEYVGDAVLNLLMAREQFVSYPNLK 128
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI-----TVDSFERLSLES 724
PG LT +RS +V+++ A ++ HGL +++ H +L + +++ +++F + +
Sbjct: 129 PGILTQLRSKNVDSEKLARVAINHGLDRYLRHKKPQLGEQVSLGIGIGQIEAFTKAIEDY 188
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
PK L D++ES GA+F+D + E+V++ R LLEP+I P T+ P E
Sbjct: 189 PIHSNGHIHVPKDLADMVESTIGALFIDCDSSLEIVWKVFRKLLEPIIEPNTVEKHPVSE 248
Query: 785 LNEYCQKHHFSMK 797
L E CQK +++
Sbjct: 249 LQEVCQKKKLNLQ 261
>gi|167046039|gb|ABZ10551.1| dicer 2 [Nematostella vectensis]
Length = 1162
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 22/199 (11%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
+E+ L Y+FRD +L++ALTH SY + Y++LEFLGDA+LDYL+T ++ ++P
Sbjct: 938 VEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPR 997
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL------- 720
LSPG +TD+RSA VNN A +++ HKH+ S L+K + V +
Sbjct: 998 LSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVRRLSEIEEKETRP 1057
Query: 721 ----------SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
++E G E+ PK LGD+ E+L GA++VD G ++E+ + I PLL P
Sbjct: 1058 DQVYSKLLLTTVEDGRGGEA-IEVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPLLTP 1116
Query: 771 MITPETMRL--QPARELNE 787
+I ++ L P R+L E
Sbjct: 1117 IIEHYSVHLPISPTRQLVE 1135
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 37/187 (19%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L A+TT + E LE GD+F+KYA S+ L+ + N +EG LS + +SN L
Sbjct: 584 ILRALTTTSANDIIDHERLEIYGDAFIKYAISELLYSDFPNVNEGRLSFLRGLRVSNQQL 643
Query: 497 CKLGCDHKLPGFIRTEPFDP-KMWMIPGDNSGSYE-------------------LNDHSL 536
LG L I T+PF+P W+ PG +S S ++D
Sbjct: 644 FYLGRSRGLAPLILTKPFEPVGSWVPPGFSSSSMRNVHETLDVSPQHGVNDVLNIDDEDS 703
Query: 537 FNERKIY-VTGRK----------------KVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
+ +I ++G + + KTVAD +EALIGA L + G N L +
Sbjct: 704 LDHSEIQDISGNECRGNVEPMLLPPHTFTVISDKTVADTIEALIGACLMSSGTNAALRLM 763
Query: 580 DRIGIKV 586
+ + V
Sbjct: 764 RWLDMDV 770
>gi|407923675|gb|EKG16741.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1533
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 200/453 (44%), Gaps = 66/453 (14%)
Query: 348 LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRI-IMGPMSLSTFYSFTFVPSIM 406
++ R++ H +N L++ +++ SK+ L PE +I + P ++++ Y +P+++
Sbjct: 947 VVEARQVQHRRNMLAEPERQEGDFRSKVY--LCPEPLKISALRPAAVASIY---VLPAVI 1001
Query: 407 HRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT-----TKKCQE---------GFHL 452
HR + L+A+ +L + I LEA+T T+K E G +
Sbjct: 1002 HRTEQYLIALEACQLL------GLDIAPDLALEAVTKDSDNTEKHNEEAQNFRRGMGNNY 1055
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
E LE +GD FLK S LF + +E VK+ +I N L +L ++R+
Sbjct: 1056 ERLEFMGDCFLKMGTSIALFSQNPDDNEFDFHVKRMCLICNQNLFDTAKRIELTKYVRSM 1115
Query: 513 PFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA-FL 567
F + W G + G + D + + + KTVADV EALIGA +L
Sbjct: 1116 AFSRRTWYPEGLKMLEGKGHKKTGDEVM----------KHSLSDKTVADVCEALIGAAYL 1165
Query: 568 S--TGGENVGLIFLDRIGIKVDFVNV-----------------PYERQFQVQAERLVNVR 608
+ T G+ + + + + V+ P + A ++ V+
Sbjct: 1166 THNTPGKWLPENWDNAVRAVAALVSSENHAMASWSEYFSAYKKPSYLDAEATAAQIDLVK 1225
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYML--PEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
E Y FR LL A H SY ++P YQRLEFLGD+++D +L K+P
Sbjct: 1226 QAEKEHPYRFRSAKLLRSAFMHPSYPFNYEKVP-SYQRLEFLGDSLIDTACITWLIYKFP 1284
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
P LT+ + A V+N VK G HKH+ ++ ++ I V ES
Sbjct: 1285 DKDPQWLTEHKMAMVSNKFLGAVCVKLGFHKHLKYSYSQMEYQIRDYVTELREAERESKG 1344
Query: 727 G---WESETSFPKALGDIIESLSGAIFVDSGCN 756
W + S PK L DI+E+ GA+FVDS N
Sbjct: 1345 ARDYWTTVKSPPKCLPDIVEAYVGALFVDSEYN 1377
>gi|156044530|ref|XP_001588821.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980]
gi|154694757|gb|EDN94495.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1515
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 195/441 (44%), Gaps = 66/441 (14%)
Query: 359 NYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL 418
++L K + + S LP +C P L F +PSI H ++ L+ L
Sbjct: 946 DFLHKVENQSPSSSKQFSCVLPASVCVQDAMPFQLVQFG--MMIPSITHHIEVQLIVDRL 1003
Query: 419 -KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQN 477
K +L D + + + V AIT + + LE LGDS LK S QL Y
Sbjct: 1004 CKTILKDLEISDRGL----VQTAITHASYSLTSNYQRLEFLGDSILKLCTSVQLISEYPL 1059
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLF 537
EG LS KDRI+SN+ + + L +I T+ F W + D+
Sbjct: 1060 WPEGYLSAMKDRIVSNSRSSRAAVELGLDEYIITKKFTGSKWR-------PMYVEDYLKT 1112
Query: 538 NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE-RQ 596
E+K +++ SK ++DVVEALIGA + GG L L ++++ +P E RQ
Sbjct: 1113 TEQK-----SRQMSSKVLSDVVEALIGACMVDGGIPKALKSLQLFFPELNW--LPLETRQ 1165
Query: 597 ---FQVQAERL---VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
+Q+ A+ L + ++ +E +L Y+F SLLVEA+TH SY+ + +RLEFLGD
Sbjct: 1166 MSLYQLAADDLHLPIALQPIEQILAYTFTKKSLLVEAMTHPSYI--NGTQSLERLEFLGD 1223
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI----------- 699
A+LD +I +++ LS + +RSA VN D A ++ + +++
Sbjct: 1224 AILDNIIVTAMWSYETELSHFQMHLLRSALVNADFLAFLCMEMSIEQYVTDLTEGKDHQI 1283
Query: 700 -----------------------LHASQELYKWINITVDSFERLSLESTFGWE--SETSF 734
++ Q L + + + + F W S
Sbjct: 1284 HETHTRRRFSLVNFLRHSSATFSIYQKQALARHQELREEILAVIKTGDKFPWTLLSRLDA 1343
Query: 735 PKALGDIIESLSGAIFVDSGC 755
K D+IESL GAI++DSG
Sbjct: 1344 RKFFSDMIESLLGAIWIDSGS 1364
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L + D L+ A+TH SY L YQRLEFLGD++L +V L ++YP G
Sbjct: 1008 LKDLEISDRGLVQTAITHASYSLTS---NYQRLEFLGDSILKLCTSVQLISEYPLWPEGY 1064
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESET 732
L+ M+ V+N + ++V+ GL ++I+ KW + V+ + + T +S
Sbjct: 1065 LSAMKDRIVSNSRSSRAAVELGLDEYIITKKFTGSKWRPMYVEDYLK-----TTEQKSRQ 1119
Query: 733 SFPKALGDIIESLSGAIFVDSGCNK 757
K L D++E+L GA VD G K
Sbjct: 1120 MSSKVLSDVVEALIGACMVDGGIPK 1144
>gi|158706454|sp|Q0CW42.2|DCL1_ASPTN RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1519
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 182/401 (45%), Gaps = 40/401 (9%)
Query: 403 PSIMHRLQSLLLAVNLKNML-----LDHCMQNVTIPTSKVLEAITTKKCQE---GFHLES 454
P+I+ RL + L+ + L L++ ++ +T + E + + + G + E
Sbjct: 1014 PAIISRLDAYLIGLEACKKLGLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMGKNYER 1073
Query: 455 LETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPF 514
LE LGD FLK A S LF + + +E V + +I N L +L FIR+ F
Sbjct: 1074 LEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFIRSRGF 1133
Query: 515 DPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE-- 572
W G + DHS +KI + + KT+ADV EALIGA L T G
Sbjct: 1134 SRDTWYPEG--LTLLQGRDHS----KKIGSESKHALAEKTIADVCEALIGAALLTPGPQH 1187
Query: 573 --NVGLIFLDRI--------GIKVDFVNVPYERQFQVQAERLVNV---RHLESLLNYSFR 619
++G+ + + D++++ ++Q QA + R +E L Y FR
Sbjct: 1188 RFDMGVRAVSAVVDSNEHNAASWRDYISLYSIPKYQEQAPDGSEIDLCRRVEEKLGYHFR 1247
Query: 620 DPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
P LL A TH SY +P CYQ LEFLGDA+LD + L+ ++P P LT+ +
Sbjct: 1248 YPRLLHSAFTHPSYPSAWARVP-CYQSLEFLGDALLDMVCVEDLFRRFPDRDPQWLTEHK 1306
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG---WESETSF 734
A V+N +VK GLH H+ + S L I + + + +S W
Sbjct: 1307 MAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHYAEEAQAAASQSDVAVDYWTLTQDP 1366
Query: 735 PKA-LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
PK L D++E+ GA+FVDS FE + + I P
Sbjct: 1367 PKVCLPDMVEAYLGAVFVDSNFR----FEEVEVFFQQHIKP 1403
>gi|406864416|gb|EKD17461.1| putative Dicer-like protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1827
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 187/785 (23%), Positives = 315/785 (40%), Gaps = 113/785 (14%)
Query: 47 ICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQ 104
IC LP P + + + + K +A E C L + L ++LLP ++ A
Sbjct: 954 ICETILPEGSPFRGSVGRPCSTKQVAKCSAAFETCLGLVKCKLLDEHLLP-TFTKQLPAM 1012
Query: 105 KHGNEPYDAE----HPIYFPPEL--VNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLA 158
++ D++ + + P L V P++ TY + L D P+ +VL
Sbjct: 1013 RNALLAVDSKKREAYEMKTKPTLWSVGGVPEEFFATY----LVLDNPKVLDRPSQPLVLL 1068
Query: 159 VRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
R+ L ++ +R + I+ TP+ + F I LF
Sbjct: 1069 TRSRL-PQLPSFYLHFGSNRHSPVEMVSIAQSIKATPEVIAQINTFTIYLF--------- 1118
Query: 219 KLNEILKGLWLRDNLEIDYLLLPA---SEQSIDWEPVASLSFPCDIGLKHH--KNCSTMS 273
N++ L+ D ++ Y L P SE + + + + +++ ++ H K
Sbjct: 1119 --NDVFSKLYESDVAKMPYFLAPGISLSEVTANTDLSSLIAWDVLKAVEDHVIKWADNPW 1176
Query: 274 NARVVQTKSGPLCTCMIYNSVVCTPHSG-QIYYITGV------LGHLNANSL----FTRN 322
+ + QT+ + + P+ G + + GV LG + NS +N
Sbjct: 1177 DNKSWQTEPDEF----FKDKFIVDPYDGSRKLWTIGVTRDHSPLGPVPPNSAPRHGTRKN 1232
Query: 323 DGGAITYKKHYEERYGIQLCFD-QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPP 381
+ + Y + + FD + ++ I +N L + ++ P K
Sbjct: 1233 NNNIMEYSCSLWSKARARRTFDPNQRVVEAEFISLRRNLLDEFDTPEEEIPKK------- 1285
Query: 382 ELCRIIMGPMSLS----TFYSFTFV-PSIMHRLQSLLLAV------NLK---NMLLDHCM 427
C +I+ P+ +S + + +V P+I+HRL+S L+A+ NLK ++ L+ C
Sbjct: 1286 --CFVILEPLKISPIPTSVVAMAYVFPAIIHRLESYLIALEACQLLNLKIRPDLALEACT 1343
Query: 428 QNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKK 487
++ E + ++ G + E LE LGD FLK A S LF + + E V +
Sbjct: 1344 KDSDNSEDHGTEQVNFQRGM-GNNYERLEFLGDCFLKMATSISLFGIHPENDEYSYHVDR 1402
Query: 488 DRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGR 547
+I N L KL +IR++ F + W G L +
Sbjct: 1403 MMLICNKNLKNNAVKLKLYQYIRSQAFSRRAWYPEG----------LVLKQGKTAAAPTT 1452
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYER 595
K+ K++ADV EALIGA L T E+ + R ++ D+ + +
Sbjct: 1453 HKLGDKSIADVCEALIGAALLTYHESKDMDAAVRAVTELVSSENHQVTCFADYYKLYKKP 1512
Query: 596 QFQV-QAERLVN--VRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGD 650
++Q+ QA + LE Y F+ P L A TH SY +P YQRLEFLGD
Sbjct: 1513 KYQLAQATEMQRNLAAQLEQEHPYHFKYPRLARSAFTHPSYPYSYEHVP-SYQRLEFLGD 1571
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
++LD +LY+ +P P LT+ + A V+N V G H+H+L + K I
Sbjct: 1572 SLLDMACINFLYHAFPDKDPQWLTEHKMAMVSNQFLGALCVSLGFHRHLLLFNAGFQKQI 1631
Query: 711 NITVDSFERLSLESTFG---------------WESETSFPKALGDIIESLSGAIFVDSGC 755
+ V ++ W S PK L D++E+ GAIFVDS
Sbjct: 1632 SDYVTDITEARTQAEADAVRAGKSPQDCNPDYWTSVRQPPKCLPDVVEAYIGAIFVDSEY 1691
Query: 756 NKEVV 760
N V+
Sbjct: 1692 NYAVI 1696
>gi|297737474|emb|CBI26675.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 134/252 (53%), Gaps = 15/252 (5%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+V +E ++NY FR+ LL EALTH SY YQRLEF+GDA L ++ Y++
Sbjct: 3 ASVEAVERIINYKFRNKKLLEEALTHSSYT---DSASYQRLEFIGDAALGCALSNYVFLA 59
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
YP+L PG L+ +R+A+++ + A +V+ GL++++ H + L + + +
Sbjct: 60 YPSLDPGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQEEGDSV 119
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPA 782
+G PK L DI+ES++ AI+VD + +V++ R LLEP++T E ++ QP
Sbjct: 120 LYG--GSVKAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQPQPV 177
Query: 783 RELNEYCQK--HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L E CQK H +K R K +V V G F + + +KE AK A+KE
Sbjct: 178 TLLYELCQKDGKHVDIKHW---RKGSKNIASVYV---GGKFIASGSSDEKEIAKLNAAKE 231
Query: 841 VLKSLKASFPGT 852
L+ L + T
Sbjct: 232 ALQKLSSKLKDT 243
>gi|189199432|ref|XP_001936053.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983152|gb|EDU48640.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1439
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 211/462 (45%), Gaps = 58/462 (12%)
Query: 345 QELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-LPPELCRIIMGPMSLSTFYSFTFVP 403
+E + R+ +++L + + + E L C + P+S + F P
Sbjct: 870 EETTIQAVRLPKRRDFLHPVSEHDNKNEAYTRIENLVASACTVENLPVSYAIF--GLLFP 927
Query: 404 SIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSF 462
SI+H+L+ ++A L+ LL+ + N+ +P ++ A+T+ EG + LE LGD
Sbjct: 928 SIVHKLEIYIVADTLRTTLLNPVEVDNLHLPI--LVTALTSSALNEGNDYQRLEFLGDCI 985
Query: 463 LKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIP 522
LK+ AS L EG+L+ KK +++SN L + L +I + F W
Sbjct: 986 LKFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYIFHKRFTGAKWR-- 1043
Query: 523 GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG------L 576
S L + +L +++ SK +ADV+E+LIGA GG L
Sbjct: 1044 -PRYISQVLAESTL--------PEKQEKSSKLIADVIESLIGASYIIGGFPKAFACVQTL 1094
Query: 577 IFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
+ L+R + ++ Y+ + ++++ +E LL Y F + +LL+EALTH ++
Sbjct: 1095 LPLERWTPLSEAKDILYDAA--PHQDTVMSLGLVEKLLGYKFTNKALLLEALTHVTFRGL 1152
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS------- 689
Y+R EFLGDAVLDY+++ L+ P LS + +R+A VN A S
Sbjct: 1153 NTNCSYERHEFLGDAVLDYIVSRRLFAHKPELSHRKMHGIRTAMVNASFLAYSMFETTVT 1212
Query: 690 ---SVKHGLHKHILHASQELYKWINITVDSF-------------------ERLSLESTFG 727
+ K L + H + L++++ T ++ L +S F
Sbjct: 1213 DELTNKDTLEPEVHH--RALWQFLRSTSNALVASRIVATQQHAEAREIIATGLKHDSRFP 1270
Query: 728 WE--SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPL 767
W S T PK L DI+ES+ GA+++DS + + E +R L
Sbjct: 1271 WHALSLTDPPKYLSDIVESVIGALYIDSHGSIAICEEFVRRL 1312
>gi|225460893|ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
Length = 364
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 134/252 (53%), Gaps = 15/252 (5%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+V +E ++NY FR+ LL EALTH SY YQRLEF+GDA L ++ Y++
Sbjct: 30 ASVEAVERIINYKFRNKKLLEEALTHSSYT---DSASYQRLEFIGDAALGCALSNYVFLA 86
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
YP+L PG L+ +R+A+++ + A +V+ GL++++ H + L + + +
Sbjct: 87 YPSLDPGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQEEGDSV 146
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPA 782
+G PK L DI+ES++ AI+VD + +V++ R LLEP++T E ++ QP
Sbjct: 147 LYG--GSVKAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQPQPV 204
Query: 783 RELNEYCQK--HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L E CQK H +K R K +V V G F + + +KE AK A+KE
Sbjct: 205 TLLYELCQKDGKHVDIKHW---RKGSKNIASVYV---GGKFIASGSSDEKEIAKLNAAKE 258
Query: 841 VLKSLKASFPGT 852
L+ L + T
Sbjct: 259 ALQKLSSKLKDT 270
>gi|453081348|gb|EMF09397.1| dicer-like protein 1 [Mycosphaerella populorum SO2202]
Length = 1541
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 172/397 (43%), Gaps = 55/397 (13%)
Query: 403 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFH----------- 451
PSI+HR +S L+ + + + C L A T +G H
Sbjct: 1012 PSIIHRFESYLICIEGCDTIGLDCGPRF------ALAAFTKDSDNQGEHETERVNFQRGM 1065
Query: 452 ---LESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
E LE +GD+FLK A + F N +E V++ +++ N L + KL +
Sbjct: 1066 GENYERLEFIGDTFLKTATTISTFIQNPNENEFAFHVRRMQMLCNKNLFGVALKLKLYEY 1125
Query: 509 IRTEPFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
IR+ F+ + W G +G + + F+E + + G KT+ADV EALIG
Sbjct: 1126 IRSIAFNRRYWYPEGLKLLSGTGVIKGQEKENFHEPRNHDLG-----EKTIADVCEALIG 1180
Query: 565 A-FLS------------TGGENVGLIFLDRIGIKV---DFVNVPYERQFQVQAERLVNVR 608
A +L+ T +D ++ D Y + AE R
Sbjct: 1181 AAYLTWDQPGAWQAEHWTNAVKAVTTLVDSDDHRMLTWDDYRTAYSKPHYQTAEATAVQR 1240
Query: 609 HLESLLN----YSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
L + Y F+ P LL A H S Y+ ++P YQRLEFLGDA+LD +L+
Sbjct: 1241 DLAQKVEREHAYRFKYPRLLYSAFMHPSVPYINEKVPN-YQRLEFLGDALLDQASITWLF 1299
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI-TVDSFE--R 719
NKYP P LT+ + A V+N V G HKH+ H L I D E R
Sbjct: 1300 NKYPDKDPQWLTEHKMAMVSNKFLGAVCVNIGFHKHLRHYHAVLQSQITAYAADLMEAKR 1359
Query: 720 LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
++ +S W + + PK L DI+E+ GA+F+DS N
Sbjct: 1360 IAGDSRDYWTTVSDPPKCLPDIVEAYIGALFIDSDFN 1396
>gi|356552945|ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-like [Glycine max]
Length = 345
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 136/249 (54%), Gaps = 13/249 (5%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E++L Y FR+ LL EALTH S++ Y+RLEF+GD VL I+ YL+ YP
Sbjct: 6 LEEVENILRYRFRNKKLLEEALTHSSFL---DGVSYERLEFVGDPVLSLAISNYLFLAYP 62
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE-ST 725
L PG L+ +R+A+V+ + A +V+ GLH+ + H++ L + VD+ + LE +
Sbjct: 63 DLDPGQLSALRAANVSTEKLARVAVRIGLHRFVRHSAPPLVDKVERFVDA---VKLEINP 119
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM--RLQPAR 783
PK L D++ES++ AI+VD + + ++ +R +LEP++TP+ + + QP
Sbjct: 120 VAHGGSVKAPKVLADVVESVAAAIYVDVNFDLQTLWVIMRGVLEPIVTPDALEKQPQPVT 179
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
L E CQK + + P G +V +V +G F + + + K+ AK A+K L
Sbjct: 180 MLYEMCQKK--GKQVDIKPSREGDLSVA-KVFVDGE-FVASASSSQKDHAKLEAAKIALG 235
Query: 844 SLKASFPGT 852
L P T
Sbjct: 236 KLAHLVPST 244
>gi|367045744|ref|XP_003653252.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
gi|347000514|gb|AEO66916.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
Length = 1591
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 192/461 (41%), Gaps = 94/461 (20%)
Query: 378 ELPPELCRIIMGPMSLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQ 428
+L P+ C + + P+ +S Y+F P+I+HR+ S L+A LD C M
Sbjct: 1026 DLEPKPCFLALEPLRISPLPVDVVAMAYNF---PAIIHRIDSNLVA-------LDACKML 1075
Query: 429 NVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKT 474
+ I LEA T + +E G + E LE LGD FLK A + +F
Sbjct: 1076 GLDIRPDLALEAFTKDSDNTEERDAEQVNFQGGMGNNYERLEFLGDCFLKMATTISIFTL 1135
Query: 475 YQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDH 534
+ E V++ ++ N L + KL +IR+ FD + W G
Sbjct: 1136 IPDKAEFDYHVERMLMVCNRNLFNNALNVKLEEYIRSMAFDRRSWYPEG----------L 1185
Query: 535 SLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN-----------VGLIFLDR-- 581
L ++ +T + + KT+ADV EALIGA T E V + D+
Sbjct: 1186 VLRKGKRKDITRQHMLADKTIADVCEALIGAAYLTAQEKDPNNFDLAVQAVTALVKDKNH 1245
Query: 582 ----------IGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHG 631
+K D+ P + +L + + Y+F+ P LL A H
Sbjct: 1246 TMTSYRDYYAAYVKPDWQTAP------ANSTQLDMAARFHARMGYAFKHPRLLRSAFQHP 1299
Query: 632 SY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
+Y M +P YQRLEFLGDA+LD +L++++P P LT+ + A V+N
Sbjct: 1300 TYPSMYERLP-SYQRLEFLGDALLDMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCL 1358
Query: 690 SVKHGLHKHILHASQELYKWINITVDSFE---------------RLSLESTFGWESETSF 734
+V+ G H+ + + S L + I V E R S W +
Sbjct: 1359 AVELGFHRALTYCSPALQREIGEYVAEMEEALQSAREDAARHGRREDEYSRDYWVDCSRP 1418
Query: 735 PKALGDIIESLSGAIFVDS----GCNKEVVFESIRPLLEPM 771
PK L D +E+ GA+FVDS G ++ +RP E M
Sbjct: 1419 PKCLPDTVEAYVGAVFVDSEYDFGRVRDFFARHVRPFFEDM 1459
>gi|406863987|gb|EKD17033.1| RNase3 domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1477
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 192/448 (42%), Gaps = 86/448 (19%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNV 430
PSK + L R M + F+PSIM+RL+ LA L K +L D +Q++
Sbjct: 926 PSKKPYSTVLPLTRCTEDKMPRILYQFGRFIPSIMYRLEKSFLATLLTKTILKDIQIQDL 985
Query: 431 TIPTSKVLEAITTKKCQEGFHLES---------LETLGDSFLKYAASQQLFKTYQNHHEG 481
+ ++ AIT + H E+ LE LGD+ LK S QL Y HEG
Sbjct: 986 ----NGIVTAITASSASDESHYENIKYEANYQRLEFLGDTILKMCTSIQLMAQYPLWHEG 1041
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
L+ K RI+SN+ L ++ L FI T+ F W + DH
Sbjct: 1042 YLTELKGRIVSNSCLYAAAIENGLDRFIITKKFSGHKWRPTYVDDLLAMGTDH------- 1094
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------IFLDRIGIKVDFVNVPY 593
V + + SK ADVVEALIGA G +G IF+ RI + P
Sbjct: 1095 --VDKPRTMSSKIPADVVEALIGACYEDG--EMGFEKPLQCLKIFIPRIDWQ------PL 1144
Query: 594 ERQFQVQAERLVNV------RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
+ + +R NV R LE +L Y F + LLVEA+TH SY L +RLEF
Sbjct: 1145 AQSQSLLFQRAPNVELPQTLRILEDMLGYEFNNKGLLVEAVTHASYNLGSA--SLERLEF 1202
Query: 648 LGDAVLDYLITVYLYNKYPT--LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH---- 701
LGDA+LDYL+ L +S + +R+A VN D A ++ + ++
Sbjct: 1203 LGDAILDYLVVERLMQTEDGTFISHVKMHLIRTALVNADILAFLCMEFHTTQEVIDLEIQ 1262
Query: 702 ------------ASQELYKWINITVDSF---ERLSLE----------------STFGWE- 729
A+ L+K++ T + ++++ E + W
Sbjct: 1263 PDGGSPQERPKMATLPLWKFMRHTSSAIAAEQQVAAELHDLLAPKIRDVFDSGKNYPWAL 1322
Query: 730 -SETSFPKALGDIIESLSGAIFVDSGCN 756
+ PK D++ESL GA++VDSG +
Sbjct: 1323 LARQQAPKFFSDLVESLIGALYVDSGLD 1350
>gi|330944921|ref|XP_003306459.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
gi|311316023|gb|EFQ85435.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
Length = 1448
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 47/385 (12%)
Query: 403 PSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
PSI+H+L+ ++A L+ LL + N+ +P ++ A+T+ EG + LE LGD
Sbjct: 965 PSIVHKLEVNIVAETLRTTLLKPVEVDNLHLPV--LVTALTSSATNEGNDYQRLEFLGDC 1022
Query: 462 FLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMI 521
LK+ AS L EG+L+ KK +++SN L + L +I + F W
Sbjct: 1023 ILKFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYIFYKRFTGAKW-- 1080
Query: 522 PGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
S L + +L +++ SK +ADV+E+LIGA GG + +
Sbjct: 1081 -KPRYISLVLAESTL--------PEKQEKSSKLIADVIESLIGASYIIGGFSKAFACVQT 1131
Query: 582 IGIKVDFVNVPYERQFQVQA----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE 637
+ + + ++ A + ++++ +E LL Y F + +LL+EALTH ++
Sbjct: 1132 LLPLEKWTPLAEAKEILYNAAPHQDTVMSLGLIEKLLGYKFNNKALLLEALTHVTFRGLN 1191
Query: 638 IPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHK 697
Y+R EFLGDAVLDY+++ LY P LS + +R+A VN A S + + +
Sbjct: 1192 TNCSYERHEFLGDAVLDYIVSRKLYAHKPELSHRKMHGIRTAMVNASFLAYSMFETTVTE 1251
Query: 698 HILHAS--------QELYKWINITVDSF-------------------ERLSLESTFGWE- 729
+ + + + L++++ T + L +S F W+
Sbjct: 1252 ELTNKNTLEPEVHQRALWQFLRCTSNELVASRIIATQQHAEARNRIATGLKHDSRFPWQA 1311
Query: 730 -SETSFPKALGDIIESLSGAIFVDS 753
S T PK L DI+ES+ GA+++DS
Sbjct: 1312 LSLTDPPKYLSDIVESVIGALYIDS 1336
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD +L ++ +++L + G LT + V+N A +++ GL ++I +
Sbjct: 1013 YQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYIFY 1072
Query: 702 ASQELYKW----INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
KW I++ + EST + E S K + D+IESL GA ++ G +K
Sbjct: 1073 KRFTGAKWKPRYISLVL-------AESTLPEKQEKS-SKLIADVIESLIGASYIIGGFSK 1124
Query: 758 EVVFESIRPLL 768
F ++ LL
Sbjct: 1125 --AFACVQTLL 1133
>gi|358332039|dbj|GAA50765.1| endoribonuclease Dicer homolog 4 [Clonorchis sinensis]
Length = 1042
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 190/415 (45%), Gaps = 87/415 (20%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK-TYQNHHEGLLSVKKDRIISN 493
+ ++E++T ++ +LE LE LGDS L+ ++ ++ + + EG L+ ++ ++SN
Sbjct: 571 ADLVESLTLLGARDAVNLERLELLGDSVLQLISTLTVYSGSPEGADEGQLTARRVDLVSN 630
Query: 494 AALC----KLGCDHKLPGFIRTEPFDPKMWMIPG-DNSGSYELNDHSLFNERKIYVTGRK 548
+ LC +LG + G + + P ++ P D S S D ++ +++V
Sbjct: 631 SNLCNIAVRLGWQNYCTGQVYSPP---DHFIFPCYDLSSSVPYRD----SDTRLFV---- 679
Query: 549 KVKSKTVADVVEA----------LIGAFL-------------STGGENVG---------- 575
++ K++AD+VEA L AF S+ G+ VG
Sbjct: 680 RLTDKSLADMVEAIVGCFLQHMGLPAAFRLLTYLGISPYANPSSQGKEVGAWDQLLSETQ 739
Query: 576 ---------------------LIFLDRIGIKVDFVNVPYERQFQVQAERL-VNVRHLESL 613
DR +P E + ERL V + L+++
Sbjct: 740 QNNRHHIRHSTPFRPLEVRPTFYLPDRNCPAGSTSILPNEIEKDDLIERLSVRLVGLQNI 799
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
L Y F+D SLL+ ALTH S + YQRLEFLGDAVL Y+IT+YLY K+ PG L
Sbjct: 800 LGYQFKDISLLIRALTHQSSPQTSLFGSYQRLEFLGDAVLGYVITIYLYEKHVEFDPGQL 859
Query: 674 TDMRSASVNNDCYALSSVKHGLHKHILH---ASQELYKWINITVDS-------FERLSLE 723
T+ RS V+N+ A + V+H LH +I+H A +I +D+ E L+ E
Sbjct: 860 TESRSNIVSNNSLACAIVEHQLHPYIIHNQPAFDTAVTFIQFILDTTTSVSDQLELLNQE 919
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR 778
G K L D+ E++ GAIFVD+ + V + I LL+P I +R
Sbjct: 920 VLKGLRV-----KILADVFEAIVGAIFVDTKGSLSTVSQLIHRLLDPRIDDYLLR 969
>gi|402073770|gb|EJT69322.1| dicer-like protein 2 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1538
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 174/362 (48%), Gaps = 48/362 (13%)
Query: 348 LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMH 407
L+ G + Q + ++ +R +I +P C + ++++ +PSI +
Sbjct: 938 LIGGEAVQQEQQGSDQPPKDNKRPYPRI---VPASDCIVDDDSLTMTMAQFGMLIPSITN 994
Query: 408 RLQSLLLAVNL--KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKY 465
+++ ++A L L ++V + V+ A++ Q + E +E LGDS LK
Sbjct: 995 AMENYMVAEELLRTTPLGTLGFKDVAL----VVTALSAPSSQNVTNYERIEFLGDSILKL 1050
Query: 466 AASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN 525
AS + EG LS+ KDRI+SN+ LC+ L FI T+
Sbjct: 1051 CASITCAANNLEYPEGYLSLVKDRIVSNSRLCRAAVKFGLDRFIITK------------- 1097
Query: 526 SGSYELNDHSLFNERKIY--VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 583
H+L +++ + ++ + +KT+ADVVEALIGA L GG + L +
Sbjct: 1098 -------QHTLRGWKRVLQAMEAQRDLSTKTLADVVEALIGAALIEGGMDKALRCISLFL 1150
Query: 584 IKVDFVNVPYERQFQVQA-----ERL-VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE 637
++ ++ RQ QA ++L V +R +E LL Y+FR+ +LLVEALTH SY +P
Sbjct: 1151 PDEEWRSLDLGRQILYQAAPKSVKKLPVTMRPVEGLLGYTFRNKALLVEALTHSSYSVPG 1210
Query: 638 IPR-CYQRLEFLGDAVLDYLITVYLY----------NKYPTLSPGDLTDMRSASVNNDCY 686
C +RLEFLGD++LD ++ L+ N P L+ D+ +R+A VN D
Sbjct: 1211 SETGCLERLEFLGDSILDSVVVEKLFAIGGGDGDGDNGRPPLAHTDMHLLRTAMVNGDFL 1270
Query: 687 AL 688
A
Sbjct: 1271 AF 1272
>gi|340373457|ref|XP_003385258.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1520
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 114/218 (52%), Gaps = 46/218 (21%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L++ F D +LL++ALTH SY + R YQRLEFLGDAVLDYLIT LY ++P+ +PG
Sbjct: 1245 LSWDFSDRALLLQALTHPSYSNKNRVTRSYQRLEFLGDAVLDYLITCCLYTEFPSYTPGQ 1304
Query: 673 LTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLES------- 724
+T+ RSA VNN +A +VK LH ++L+ S L++ I V+ + ES
Sbjct: 1305 ITETRSALVNNVTFAEIAVKKLSLHTYLLYLSPSLFRKITEYVEFLQEDERESGSEKELI 1364
Query: 725 --TFGWESETSF-----------------------PKALGDIIESLSGAIFVDSGCNKEV 759
FG +SE PK LGD++ESL+GA+F+DSG + E
Sbjct: 1365 YCRFGDQSENVHEEMNGDIAMLEEEEEADITELEPPKVLGDVLESLAGALFLDSGMSLET 1424
Query: 760 VFESIRPLLEPMITP------------ETMRLQPAREL 785
V+ P P+I E MR +P+ E+
Sbjct: 1425 VWSYFYPFFRPLIESFKEKGPPVHPIQELMRTEPSVEI 1462
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 15/268 (5%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+++T ++ F LE LETLGDSFLK A S LF HEG L+ + ISN
Sbjct: 1000 SLLLQSLTGTSAKDSFDLERLETLGDSFLKLAVSVSLFCGRGKDHEGKLTRSRINRISNF 1059
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIPGDN-SGSYELNDHSLFNERKIYVTG--RKKV 550
L L LPG ++TE F+P W+ PG + S L DH N + KV
Sbjct: 1060 NLSFLAKKKGLPGLLQTEQFEPLSGWIPPGFSLSLDSALPDHVPPNTLPAVIQKYYYHKV 1119
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHL 610
K +AD EAL+GA+L GG G FLD +G++ + + + + + + +
Sbjct: 1120 TDKGIADSTEALLGAYLIAGGLGAGFSFLDWLGLQKPTESSSFSQDVTMSSCNVSRKQSQ 1179
Query: 611 ESLLNYSFRDP---SLLVEALTH--GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
SL++ P +L++ TH S LP P L + D I L +
Sbjct: 1180 SSLMSIEEASPCINPILLQNSTHVFSSCCLPPPP------SLLDSSAPDTTIDKLLSSAV 1233
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKH 693
P L D S ++ L ++ H
Sbjct: 1234 PGGGRSSLYDKLSWDFSDRALLLQALTH 1261
>gi|89114030|gb|ABD61606.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114040|gb|ABD61611.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114042|gb|ABD61612.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114044|gb|ABD61613.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEKRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114024|gb|ABD61603.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114020|gb|ABD61601.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114038|gb|ABD61610.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114036|gb|ABD61609.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEXRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATXELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114050|gb|ABD61616.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTSRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114034|gb|ABD61608.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114046|gb|ABD61614.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114022|gb|ABD61602.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|452979125|gb|EME78888.1| hypothetical protein MYCFIDRAFT_43585 [Pseudocercospora fijiensis
CIRAD86]
Length = 1516
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 191/788 (24%), Positives = 319/788 (40%), Gaps = 133/788 (16%)
Query: 47 ICTLYLPNNCPIQTVIAQ-GNIKTL-KQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQ 104
+C + LP N P++++I + KTL K++A EA +L + + +NL+P V + A
Sbjct: 630 VCEVVLPGNSPLRSMIGKVHQKKTLAKRSAAFEAVIELRKKSWINENLMP-VYQRKLPAM 688
Query: 105 KHGNEPYDA----EHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVR 160
++ D ++ + P++ + + +I+ + D I R
Sbjct: 689 RNALLAVDMKKTNQYAMRIKPKIWAEQRGTLPVQLWITVIDFPEKL--DRVHQPIAFLTR 746
Query: 161 TELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDK 219
T++ + +F + ++ GR T V LG L + L ++ FRV D
Sbjct: 747 TQMP---QFPSFPIYLNDGRATTVKSADLGAPLLVDQERL--KKLTAFTFRVFRD----- 796
Query: 220 LNEILKGLWLRDNLEIDYLLLPA----------SEQSIDWEPVASLSFPC--DIGLKHHK 267
+ + D ++ Y L PA S +ID P+ ++ + D+
Sbjct: 797 ---VFSKTYEEDAAKLSYWLAPATLLLSTDQASSAHNID--PMTAIDWRLLEDV------ 845
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNAN-------SLFT 320
+ N T S P + +V + +Y GV L+ + S
Sbjct: 846 ----LDNDEYKWTPSTP-HDRFVDKFIVDMFDGSRKFYSIGVDSSLHQDDPIPEHASKGK 900
Query: 321 RNDGGAIT------YKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSK 374
N GG+I +KK + R Q + ++ + +N L+ Q K+ P
Sbjct: 901 GNRGGSIMNYSVSLWKKSRQARVWSQ----NQPVVEADIVLQRRNMLAPPEQ-KELAPVT 955
Query: 375 ISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIP 433
++ +P L + P ++ + + P+I HR +S L+++ + C VT
Sbjct: 956 KAYIVPEPLRISAITPNVAASCFVW---PAIAHRFESCLISI-------EGCEAVGVTCG 1005
Query: 434 TSKVLEAITTKKCQEGFH---------------LESLETLGDSFLKYAASQQLFKTYQNH 478
L A T +G H E LE +GD+FLK A + F N
Sbjct: 1006 PEFALAAFTKDSDNQGEHEAEERVNFQRGMGENYERLEFIGDTFLKTATTISTFIMNPNE 1065
Query: 479 HEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG----DNSGSYELNDH 534
+E V++ ++ N L + KL +IR+ F+ + W G +G + +
Sbjct: 1066 NEFEFHVRRMLMLCNKNLYQTALQLKLYEYIRSLAFNRRYWYPEGLKLLVGTGVVKGQEK 1125
Query: 535 SLFNERKIYVTGRKKVKSKTVADVVEALIGA-FLS--TGGEN-------------VGLIF 578
+++E + G KT+ADV EALIGA +LS GE L+
Sbjct: 1126 EMYHEPREVGLG-----EKTIADVCEALIGAAYLSHDKPGEAWEPEHWRDAVRAVTKLVK 1180
Query: 579 LD--RIGIKVDFVNVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS- 632
D ++ D+++ + +Q V +E Y+F P LL A H S
Sbjct: 1181 SDDHKMQTWQDYIDAYDKPAYQTGESTAVQKDLALRVEKEHAYTFTYPRLLYSAFMHPSV 1240
Query: 633 -YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSV 691
YM ++P YQRLEFLGDA+LD YL+ KYP P LT+ + A V+N V
Sbjct: 1241 PYMYEKVP-SYQRLEFLGDALLDMASITYLFYKYPDKDPQWLTEHKMAMVSNKFLGALCV 1299
Query: 692 KHGLHKHILHASQELYKWINITVDSFERLSLESTFG------WESETSFPKALGDIIESL 745
G HKH+ H L + + E L + G W + + PK L DI+E+
Sbjct: 1300 DIGFHKHLRHHHATLEH--QVRDYATELLEAKRIAGKGCVDYWTTVSDPPKCLPDIVEAY 1357
Query: 746 SGAIFVDS 753
GA+F+DS
Sbjct: 1358 IGAMFIDS 1365
>gi|89114028|gb|ABD61605.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEK 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|403171531|ref|XP_003330752.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169221|gb|EFP86333.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1403
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 200/837 (23%), Positives = 346/837 (41%), Gaps = 124/837 (14%)
Query: 68 KTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQC 127
K K++A EACK L ++G L ++ LP H K G + DA+ + ++
Sbjct: 607 KEAKRSAAFEACKVLRELGVLNEHFLP------HREDKTG-QARDADDQVQ---AIIPNV 656
Query: 128 PQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVN--FDLEVDRGRLTVNL 185
D + + +L E+ +F + PA + +I + +D D L V +
Sbjct: 657 YGDFRTSQEVWLHEI--SFPDESPAGFSTMGFLCAQHVDISEGLHLYDHYQDSRTLPVKI 714
Query: 186 KHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNE-----ILKGLWLRDNLEIDY--- 237
K ++ D + + + R+++ +++ + L L D EID+
Sbjct: 715 KRSRRMTWAQDDLSINLQRLETFTRLVIQVAVNRKSYEGRLLFLVAPLLNDTCEIDWNLV 774
Query: 238 --LLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQT--KSGPLCTCMIYNS 293
L+P S + SL + C I H +C R+ T SG L +
Sbjct: 775 ETPLIPLSNHA------DSLRYQCTIVPIPHLHC------RIFDTCEPSGDLSFASKPHH 822
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRR 353
V H G + + N + A+ Y E+ G +L + Q
Sbjct: 823 VPAGQHMGD--FCKKISKFRNLGHFY------AVVYNLKPEQFKG-KLVYLQS------- 866
Query: 354 IFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
F + LSK + +P ++ LP +LC+ P SL + F+++PS+ L L
Sbjct: 867 TFEVLDNLSKS-ESLLTQPYRLL--LPLKLCQGSRIPRSL--WKVFSYLPSLTRLLHDAL 921
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
A L L +++P + A+T + ++LET+GD+FLK A S ++
Sbjct: 922 QAKFLFKRL---DFPAISLPHG--IHALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYI 976
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELND 533
++ EG +S + R I NA L + LPG I ++ F +G +
Sbjct: 977 SHLRKGEGDMSHVRARSIDNAYLRRKAVQANLPGSILSQRF----------RTGKFR--- 1023
Query: 534 HSLFNERKIYVTGR--KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF--- 588
+ E K G +K+ + ++DVVEAL+GA L TGG +GL ++G +D
Sbjct: 1024 DAQTEEGKELANGNFSRKIPRRVLSDVVEALLGAGLLTGGIELGL----KVGTALDLCFG 1079
Query: 589 -----------VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE 637
++ + ++ L+ +E +NY F++ LV+ALTH S
Sbjct: 1080 GISPWSQRTLTISFGKDAHDKLDPSMLLTCEQIERKINYVFKEKLFLVQALTHRSAN-SF 1138
Query: 638 IPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLH 696
+ CY+R E+LGDAV+D I + Y ++ + +L+ R+ N ++K GLH
Sbjct: 1139 LTNCYEREEWLGDAVIDMWIVEHAYKRFDNATADELSLARAKVACNGSLGFLAIKKLGLH 1198
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESETSF-----PKALGDIIESLSGAIFV 751
+ I+H S ++ +++ E + S F F PK L D +E++ GA+FV
Sbjct: 1199 EFIMHKSDNFHQACAEAIEAIEPFTKISEFFSNINNLFVVFDPPKILNDALEAIVGAVFV 1258
Query: 752 DSGCN-------KEVVFESIRPLLEPMITPET----MRLQPARELNEYCQKHHFSMKKTV 800
DSG N +V+FE + P L + + +RL+ + E + +
Sbjct: 1259 DSGLNLPTAYRVLDVIFEDVTPSLSRLAARDPVSTLLRLRDRYQCTELLR----TTTTIN 1314
Query: 801 APRINGKAAVTVEVHA-----NGTLFKHTHADADKETAKKVASKEVLKSLKASFPGT 852
P G+ V V +G + A++ AS E +K L+ S P +
Sbjct: 1315 EPNPEGEEKTPVSVRVCRIEFHGQQIGIGRHQSSTSVAEQRASLEAIKVLQESLPSS 1371
>gi|413933741|gb|AFW68292.1| hypothetical protein ZEAMMB73_963828 [Zea mays]
Length = 251
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 13/240 (5%)
Query: 99 EEHDAQKHGN--EPYDAEHPIYFPPELV-NQCPQDTKITYHCYLIELKQNFNYDIPAHDI 155
E K GN E Y P+YFP EL+ N + Y+CY I L+ + N DI
Sbjct: 19 EAPSKAKRGNAEEKYQHGQPVYFPEELMDNWVSFSLRGLYYCYNISLQGSCNTTADPTDI 78
Query: 156 VLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDH 215
+LAV+ ++ + + +F+L G + +K+L KI L ++VL RRFQI + ++++
Sbjct: 79 ILAVKCDMGPDFFRYSFNL----GGTDITIKYLYKIHLNQEQVLFARRFQITVLSLLINS 134
Query: 216 NLDKLNEILKGL--WLRDNLEIDYLLLPASEQSIDWEPVA-SLSFPCDIGLKHHKNCSTM 272
N +++ +K W D L + YLLLP + IDW + S S D+ K+ ++C +
Sbjct: 135 NSSEVSNAIKYFREWQVD-LGVVYLLLPTASGKIDWCGIKFSTSSAYDVTDKNMRHCHSC 193
Query: 273 SNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKH 332
+A ++QT P C C++ NSVV P + Y ITG+ LNAN N+ A++ K++
Sbjct: 194 KDADILQTMDDPCCRCILQNSVVYAPRERKFYIITGL--DLNANQPLDLNNRSAVSCKRY 251
>gi|89114026|gb|ABD61604.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDY+IT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYIITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|452988240|gb|EME87995.1| hypothetical protein MYCFIDRAFT_104430, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1360
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 183/421 (43%), Gaps = 72/421 (17%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLK-NMLLDHCMQNVTIPTSKV 437
+P C I P + F +F VPS++HRL L A L+ L D ++N T+ +
Sbjct: 860 VPASECTIERMPARYALFAAF--VPSMLHRLDLALTAAILQAGTLGDIDVKNTTL----I 913
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
L+A+ + E LE LGD LK+ A Q+ + EG L++++D+I+ N+ L
Sbjct: 914 LDALCSPSAGEPADYNRLEYLGDQILKHCAEVQVMAQHLKRPEGSLTLQRDKIVRNSTLA 973
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
K L FI T+PF W P F++ G++++ +KT+AD
Sbjct: 974 KAALQAGLDEFIITKPFTGAKWRPPS-------------FSKTSGLDCGKREISTKTLAD 1020
Query: 558 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV---PYERQFQVQAERLV------NVR 608
VVE+L+GA GG GL IK+ N P F + L +
Sbjct: 1021 VVESLVGAAYLDGGLAKGLQC-----IKILLPNEIWHPLPHCFNLLLSDLGPAASHDGLS 1075
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPR-CYQRLEFLGDAVLDYLITVYLYNKYPT 667
LE ++ + F LL++A+TH P + Y+RLEFLGD+VLD +IT +L+
Sbjct: 1076 FLERMIGHEFEHKQLLMQAITH--VTCPYKGQLSYERLEFLGDSVLDLVITPHLFAHKRL 1133
Query: 668 LSPGDLTDMRSASVN--------------NDCYALSSVKHGLHKHI-----------LHA 702
L +L A VN D + +V G ++ + L A
Sbjct: 1134 LRHWELHQAHEALVNKYFLGYCCMNYAIEQDENDIVAVADGSYRAMPKLRKVHLYDFLRA 1193
Query: 703 SQELYKWINITVDSF--------ERLSLESTFGWESETSF--PKALGDIIESLSGAIFVD 752
+ + V F ERL + + W + PK DIIES+ GA+++D
Sbjct: 1194 DSQTAQMRRTAVAKFDAMVPEIAERLQGGTEYPWPELVTLSPPKFFSDIIESVLGALYID 1253
Query: 753 S 753
S
Sbjct: 1254 S 1254
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+L + ++ +L+++AL S P Y RLE+LGD +L + V + ++ G
Sbjct: 901 TLGDIDVKNTTLILDALCSPS---AGEPADYNRLEYLGDQILKHCAEVQVMAQHLKRPEG 957
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE 731
LT R V N A ++++ GL + I+ KW SF + S E
Sbjct: 958 SLTLQRDKIVRNSTLAKAALQAGLDEFIITKPFTGAKW---RPPSFSKTSGLDCGKREIS 1014
Query: 732 TSFPKALGDIIESLSGAIFVDSGCNK 757
T K L D++ESL GA ++D G K
Sbjct: 1015 T---KTLADVVESLVGAAYLDGGLAK 1037
>gi|330913942|ref|XP_003296428.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
gi|311331414|gb|EFQ95479.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
Length = 1572
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 203/483 (42%), Gaps = 75/483 (15%)
Query: 348 LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPE--LCRIIMGPMSLSTFYSFTFVPSI 405
+L +I +N+L++ +++ E + + PE L + P + + +P+I
Sbjct: 987 VLEVEKIPFRRNHLARIEDKEKGELDDLKTYVCPEPLLVSNLATPFVVMCY----VLPAI 1042
Query: 406 MHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTK--------------KCQEGF 450
+HR +S L+A LD C + ++ + + LEA+T K G
Sbjct: 1043 IHRFESYLIA-------LDACEVLDLKVSPALALEALTKDSENSEEHGEEKINFKSGMGP 1095
Query: 451 HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGC--------- 501
+ E LE LGD FLK A S +F + +E V++ ++ N L +
Sbjct: 1096 NYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKKKVTSAD 1155
Query: 502 ----DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
D +L +IRT+ F + W G L + ++ + K++AD
Sbjct: 1156 GTERDIQLYNYIRTDSFSRRTWY----PEGMKLLRGKGVNKSEDDWLKLTHNLGDKSIAD 1211
Query: 558 VVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP---------YERQFQV------ 599
V EA IGA GG + + + F N P Y +Q+
Sbjct: 1212 VCEAFIGAAFQEHYKGGRWNAADWDETVKAVKLFANSPDHEMSNWADYYAAYQMPKYQIA 1271
Query: 600 --QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDY 655
A L R +E+ Y F+ P LL A H SY + IP YQRLEFLGD++LD
Sbjct: 1272 DATAAMLDMARKIEAKHPYHFKYPRLLRSAFAHPSYPYIYENIPN-YQRLEFLGDSLLDM 1330
Query: 656 LITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN---I 712
+LY KYP P LT+ ++ V+N VK G H +I + L I +
Sbjct: 1331 AFITHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHVYIKQNTAILTSQIRDYVL 1390
Query: 713 TVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFE----SIRPLL 768
ER S + W + + PK L D+IE+ + A+FVD+ + VV + ++P
Sbjct: 1391 EAQEAERESGGAVDYWVTISEPPKCLADVIEAYTAALFVDAEFDFSVVQDFFNLHLKPFF 1450
Query: 769 EPM 771
E M
Sbjct: 1451 EDM 1453
>gi|392596196|gb|EIW85519.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1520
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 192/426 (45%), Gaps = 50/426 (11%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRL------QSLLLAVNLKNMLLDHCMQNVTIP 433
P + CRI+ P + + +F +P + RL Q+ + L + D ++ ++P
Sbjct: 956 PRDCCRIVHFPPHI--YNAFHLLPKVCRRLTDVYRAQAQRFELGLPPIADDLLIEAASLP 1013
Query: 434 TSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISN 493
T+ ++ + ETLGDS LK + + Y + HEG LS + +SN
Sbjct: 1014 TT-----------LHTWNNQRFETLGDSVLKLGVTVHIMNKYPHRHEGQLSKLRQSSVSN 1062
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMI--PGD---------NSGSYELNDHSLFNERKI 542
L + L F+ +E + W P + +G+ E R
Sbjct: 1063 RTLLARAKEIGLEIFLNSETQSLQSWRYVHPSECTASASAALTAGTAESPSSKAPARR-- 1120
Query: 543 YVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY-ERQFQVQA 601
+++ +++ D +EA +GA GG ++ L +G+ +P+ R +V
Sbjct: 1121 ---AKREFPRRSLQDCMEATLGAAFYHGGMDMALRAGTALGLSFGG-ELPWCARYGRVPD 1176
Query: 602 ERLVN--VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 659
L+S L Y F LLVEA TH S+ YQRLEFLGDA+LD ++
Sbjct: 1177 PSPAPPLFEELQSGLGYEFHRGDLLVEAATHPSFAT-SAGASYQRLEFLGDALLDVVVMR 1235
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFE 718
YL++KYP + G L+ RS +V A +VK LH+ +L + EL I+ V +
Sbjct: 1236 YLFHKYPRATSGQLSVARSRAVCGPTLASVAVKRLNLHQILLINNVELSIAISRHVPLLQ 1295
Query: 719 RLSLESTF--GWESETSFPKALGDIIESLSGAIFVDSGCNKE----VVFESIRPLLEPMI 772
L + W+ + PKAL DI+ES+ GA+ VDS N E VV E + +LE +I
Sbjct: 1296 NLPTQEIVLKAWKYDP--PKALSDIMESVFGAVLVDSAYNYEKAAAVVEEVMSEVLE-LI 1352
Query: 773 TPETMR 778
+P R
Sbjct: 1353 SPSVAR 1358
>gi|357118476|ref|XP_003560980.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 360
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 7/188 (3%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+E LL Y F D +LL ALTH S+ YQRLEFLGDA LD + +LY PTL
Sbjct: 25 RVERLLQYRFHDRALLELALTHQSFSGGAA--SYQRLEFLGDAALDLAFSDFLYRANPTL 82
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINITVDSFERLSLES 724
PG+LT +R+A+++ + A +V+H L+ + A L ++I + E +
Sbjct: 83 GPGELTTLRAANISTEKLARVAVRHDLYPLLRRACPPLDLLVGQFIELVKQELEDDFSTA 142
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
+G PK L DI+E+++ A+++D + E ++ R L EP+IT ETM QP
Sbjct: 143 PYGG-CVVKAPKVLADIVEAIAAAVYMDCKSDIEKFWKVTRRLFEPLITVETMHEQPMSM 201
Query: 785 LNEYCQKH 792
LNE CQKH
Sbjct: 202 LNELCQKH 209
>gi|89114048|gb|ABD61615.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 107/224 (47%), Gaps = 44/224 (19%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITR 1882
Query: 592 PYERQFQVQ---------AERLVNV-----------------------------RHLESL 613
+ Q Q AE +V V E
Sbjct: 1883 HLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEES 1942
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG L
Sbjct: 1943 LGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGAL 2002
Query: 674 TDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
TD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 2003 TDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114032|gb|ABD61607.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 107/228 (46%), Gaps = 52/228 (22%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1825 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1878
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + E +V V
Sbjct: 1879 PITRQLDGGNQEQRIPGSTKPNPENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1938
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1939 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 1998
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
PG LTD+RSA VNN +A +V+HG HK H S L N +D F
Sbjct: 1999 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1667 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1726
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1727 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1755
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|189205613|ref|XP_001939141.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975234|gb|EDU41860.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1572
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 203/483 (42%), Gaps = 75/483 (15%)
Query: 348 LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPE--LCRIIMGPMSLSTFYSFTFVPSI 405
+L +I +N+L++ +++ E + + PE L + P + + +P+I
Sbjct: 987 VLEVEKIPFRRNHLARVEDKEKGELDDLKTYVCPEPLLISNLATPFVVMCY----VLPAI 1042
Query: 406 MHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVLEAITTK--------------KCQEGF 450
+HR +S L+A LD C + ++ + + LEA+T K G
Sbjct: 1043 IHRFESYLIA-------LDACGVLDLKVSPALALEALTKDSENSEEHGEEKINFKSGMGP 1095
Query: 451 HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGC--------- 501
+ E LE LGD FLK A S +F + +E V++ ++ N L +
Sbjct: 1096 NYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKKKVTSVD 1155
Query: 502 ----DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVAD 557
D KL +IRT+ F + W G L + ++ + K++AD
Sbjct: 1156 GTERDIKLYNYIRTDSFSRRTWY----PDGMKLLRGKGVNKSEDDWLKLTHNLGDKSIAD 1211
Query: 558 VVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP---------YERQFQVQAERLV 605
V EA IGA GG + + + F N P Y +Q+ ++
Sbjct: 1212 VCEAFIGAAFQEHYKGGRWNAADWDETVKAVKLFANSPDHEMSKWTDYYAAYQMPKYQIA 1271
Query: 606 NVR--------HLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDY 655
+ +E+ Y F+ P LL A H SY + IP YQRLEFLGD++LD
Sbjct: 1272 DATAAMLDMACKIEAKHPYHFKYPRLLRSAFAHPSYPYIYENIPN-YQRLEFLGDSLLDM 1330
Query: 656 LITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN---I 712
+LY KYP P LT+ ++ V+N VK G H +I + L I +
Sbjct: 1331 AFITHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHVYIKQNTAILTSQIRDYVL 1390
Query: 713 TVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFE----SIRPLL 768
ER + + W + + PK L D+IE+ + AIFVD+ + VV + ++P
Sbjct: 1391 EAQEAEREASSAVDYWVTISEPPKCLADVIEAYTAAIFVDAEFDFSVVQDFFNMHLKPFF 1450
Query: 769 EPM 771
E M
Sbjct: 1451 EDM 1453
>gi|119174400|ref|XP_001239561.1| hypothetical protein CIMG_09182 [Coccidioides immitis RS]
Length = 1357
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 172/401 (42%), Gaps = 88/401 (21%)
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK--VLEAITTK-------KCQE------- 448
I+ R++S L+A L+ C Q + +P S LEA+T + Q+
Sbjct: 898 IISRIESYLIA-------LEAC-QELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGM 949
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G + E LE LGD FLK A S LF + D+ G+
Sbjct: 950 GKNYERLEFLGDCFLKMATSISLFA-------------------------MNPDNDERGW 984
Query: 509 IRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLS 568
P + G + G+ E N H+L + KT+ADV EALIGA
Sbjct: 985 Y---PGGLTLLQGKGQSKGATE-NKHALAD--------------KTIADVCEALIGACCL 1026
Query: 569 TGGEN----------VGLIFLDRIGI-----KVDFVNVPYERQFQVQAERLVNVRHLESL 613
+N L+ D + ++P + V A L ++
Sbjct: 1027 LASKNHRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSIPKYQTAVVDAAELDLAAQVKKK 1086
Query: 614 LNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD ++Y+K+P P
Sbjct: 1087 LGYDFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMACVEHIYHKHPDKDPQ 1145
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES---TFGW 728
LT+ + A V+N +V+ GLH H+ H S L I V+ E LES W
Sbjct: 1146 WLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGDPPDAW 1205
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
+ PK L D++E+ GAIF+DSG + EVV E + L+
Sbjct: 1206 TLTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLK 1246
>gi|326533632|dbj|BAK05347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 381
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 111/202 (54%), Gaps = 6/202 (2%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITV 659
A+R +E LL Y FRD SLL EALTH S+ YQRLEF+GDA L +
Sbjct: 37 ADRAEAAARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSN 96
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
+LY PT+ PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 97 FLYLTNPTVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQ 156
Query: 720 LSLESTFG----WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
LE G S PK L DI+E+++ A++VD N E +++ R L EP++T E
Sbjct: 157 -ELEDDLGITPYGGSVFKAPKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAE 215
Query: 776 TMRLQPARELNEYCQKHHFSMK 797
T+ QP L+E CQKH +K
Sbjct: 216 TIDEQPVSTLHELCQKHGKDIK 237
>gi|255577153|ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
gi|223531076|gb|EEF32926.1| ribonuclease III, putative [Ricinus communis]
Length = 342
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 26/255 (10%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
++ +E +LNY+F++ L+ EALTH SY P YQRLEF+GDA L ++ +++ Y
Sbjct: 6 SISAVEKILNYTFKNKQLVEEALTHSSYTAS--PN-YQRLEFIGDAALGLALSNHVFLAY 62
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L PG L+ +R+A+++ + A +VKHGL + + H + L + D+ R E+
Sbjct: 63 PDLDPGHLSLLRAANISTEKLARVAVKHGLFRFLRHNATALDDKVKEFSDAVLREEDEAV 122
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPA--R 783
PK L DI+ES++ A++VD + + ++ R LLEP++TPE ++ QP
Sbjct: 123 -AHGGTVKAPKVLADIVESVAAAVYVDVNFDLQRLWVIFRGLLEPIVTPEDLQQQPQPMT 181
Query: 784 ELNEYCQK--------HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKK 835
L E CQK H S K +A ++ +G F + + KETAK
Sbjct: 182 MLFELCQKKGKEVDIVHWKSGTKNIA-----------SIYVDGG-FVASGSSEQKETAKL 229
Query: 836 VASKEVLKSLKASFP 850
A+K L+ L P
Sbjct: 230 NAAKGALQKLSHLMP 244
>gi|326497771|dbj|BAK05975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 111/202 (54%), Gaps = 6/202 (2%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITV 659
A+R +E LL Y FRD SLL EALTH S+ YQRLEF+GDA L +
Sbjct: 35 ADRAEAAARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSN 94
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
+LY PT+ PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 95 FLYLTNPTVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQ 154
Query: 720 LSLESTFG----WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
LE G S PK L DI+E+++ A++VD N E +++ R L EP++T E
Sbjct: 155 -ELEDDLGITPYGGSVFKAPKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAE 213
Query: 776 TMRLQPARELNEYCQKHHFSMK 797
T+ QP L+E CQKH +K
Sbjct: 214 TIDEQPVSTLHELCQKHGKDIK 235
>gi|357129531|ref|XP_003566415.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 366
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y F D LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 25 ADRSEAAARVERLLCYQFHDRGLLEEALTHQSFGDGSV--SYQRLEFVGDAALGNAFSNF 82
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
LY PT+ PG L+ +RSA+++ + A +V+H L+ + A L + ++S ++
Sbjct: 83 LYLTNPTIGPGALSTLRSANISTEKLARVAVRHDLYPLLRRACPRLDLLVGQFIESVKQ- 141
Query: 721 SLESTFGWE----SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET 776
LE G S PK L DI+E+++ A++VD + E +++ R L EP+IT ET
Sbjct: 142 ELEDDLGAAPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAET 201
Query: 777 MRLQPARELNEYCQKH 792
+ QP L+E CQKH
Sbjct: 202 IDEQPVSTLHELCQKH 217
>gi|154300125|ref|XP_001550479.1| hypothetical protein BC1G_10438 [Botryotinia fuckeliana B05.10]
Length = 1398
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 224/554 (40%), Gaps = 125/554 (22%)
Query: 353 RIFHAQNYLSKCRQEKQREPSK-ISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQS 411
++ ++L K + EK +K S LP C + P LS F +PSI H ++
Sbjct: 890 KVSRRADFLHKVQNEKPSSFTKQFSSVLPASTCVQDVMPAQLSRF--GMMIPSITHHIEV 947
Query: 412 LLLAVNLKNMLLDHCMQNVTIPTSKVLE-AITTKKCQEGFHLESLETLGDSFLKYAASQQ 470
L+ L +L +++ I +++ AIT + + LE LGDS LK S Q
Sbjct: 948 QLVVDRLSRTIL----KDLEISDQSLIQTAITHASYSLDSNYQRLEFLGDSILKLCTSVQ 1003
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYE 530
L + + HEG LS KDRI+SN+ + + L +I T+ F W
Sbjct: 1004 LVAEHLDWHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKW--------RPM 1055
Query: 531 LNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN 590
D + E+K +++ SK ++DVVEALIGA L
Sbjct: 1056 YVDDLVVTEQKT-----REMSSKILSDVVEALIGASL----------------------- 1087
Query: 591 VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 650
R +E +L Y+F SLLVEA+TH SY + +RLEFLGD
Sbjct: 1088 -----------------RPVEQILAYTFTKKSLLVEAMTHPSYT--SGTQSLERLEFLGD 1128
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL-------HAS 703
++LD +I +++ LS + +RSA VN D A ++ + +++ H
Sbjct: 1129 SILDNIIVTAMWSHSTPLSHFHMHLLRSALVNADFLAFLCMEMSIDQNVTNLTEGKNHRI 1188
Query: 704 QELYKWINITVDSFERLS----------------------LES-----TFGWE--SETSF 734
E + +++ SF R S LE+ TF W S
Sbjct: 1189 HETHSRRRVSLVSFLRHSSVRLSIYQKEALSRHAELRDQILEAIYTGDTFPWALLSRLDA 1248
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR---------LQPAREL 785
K D+IESL GA+++DSG E L+E M MR + P EL
Sbjct: 1249 RKFFSDMIESLLGAVWIDSGS-----MEVCTQLIERMGVLRYMRRILKDGVRIMHPKEEL 1303
Query: 786 NEYCQKHH--FSMKKTV----APRINGKAAVTVEVHANGTLF------KHTHADADKETA 833
+ + +++ A +N A V T+F A KE
Sbjct: 1304 GIVADSENVRYVLRREKMGGDATEVNADADEEVRTEYRCTVFVGGEEIVEVRGGARKEEI 1363
Query: 834 KKVASKEVLKSLKA 847
+ A+++ ++ LKA
Sbjct: 1364 QARAAEQAVRILKA 1377
>gi|389633725|ref|XP_003714515.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
gi|158706447|sp|A4RKC3.2|DCL1_MAGO7 RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|351646848|gb|EHA54708.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
Length = 1591
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 187/437 (42%), Gaps = 79/437 (18%)
Query: 381 PELCRIIMGPMSLS------TFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIP 433
P+ C +++ + +S ++TF P+I++RL++ L+++ +N+ LD + I
Sbjct: 998 PQTCYLVLETLLISQIPVDTVVMAYTF-PAIIYRLENSLISLEACQNLGLDIPIDIALIA 1056
Query: 434 TSKVL-------EAITTKKCQEGFHLESLETLGDSFLKYAASQQLF-----KTYQNHHEG 481
+K EA + G + E LE LGD FLK A S L+ ++ H E
Sbjct: 1057 MTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEGDEFEYHVER 1116
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
+L I N L + L IR++ F+ + W PG L +K
Sbjct: 1117 MLD------ICNKNLLNWALESNLQEHIRSKSFNRRTWYPPG----------LKLLKGKK 1160
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-PYERQFQVQ 600
V + K++ADV EALIGA T F + V V V + + +Q
Sbjct: 1161 TEVDDEHALGDKSIADVCEALIGAAYLTAQAQSSPNF----DLAVKAVTVMTHSKTHTMQ 1216
Query: 601 A--------------------ERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEI 638
A +L +++ + Y F++P LL A H SY I
Sbjct: 1217 AWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENI 1276
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQRLEFLGD++LD + YL+ K+P P LT+ + A V+N + +V G H+H
Sbjct: 1277 P-SYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRH 1335
Query: 699 ILHASQEL----YKWINITVDSFE--------RLSLESTFG---WESETSFPKALGDIIE 743
++H L +W + E R E + W PK L DI+E
Sbjct: 1336 LIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCLPDILE 1395
Query: 744 SLSGAIFVDSGCNKEVV 760
+ GA+FVD+G + V
Sbjct: 1396 AYVGALFVDTGYDYSAV 1412
>gi|378727578|gb|EHY54037.1| RNA helicase/RNAse III [Exophiala dermatitidis NIH/UT8656]
Length = 1629
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 155/594 (26%), Positives = 244/594 (41%), Gaps = 109/594 (18%)
Query: 226 GLW-LRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGP 284
G W D + + L + S + W+P A+ D N NA +V SG
Sbjct: 852 GKWTFEDVINVPELHVGGSGERQRWQPAATPDTTID-------NARKWCNAFLVDPGSGK 904
Query: 285 --------LCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEER 336
+ I++++ + Q + ++ ++ D G++ +K Y+
Sbjct: 905 FHYFTRDIVPATTIWDAIPDSAKDVQKKHKDTIIEFTDSTWRKKGKDLGSLAHK--YDPH 962
Query: 337 YGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTF 396
Q +L++ GR N+L KC +E+QR +C I P+ ++
Sbjct: 963 ---QPVLQAKLVMAGR------NFLEKCPKEEQRY----------AMCEIAPQPLEIARV 1003
Query: 397 -YSFTFV----PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT--------- 442
YS + PSI+HRL++ L+ + L IP + LEA T
Sbjct: 1004 SYSVAQICQLWPSILHRLEAYLIVGEAFDKL-----DLRQIPYNLALEAFTKDINADDEM 1058
Query: 443 -----------TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
T + + E LE +GDS LK + +F + EG+ K+ +I
Sbjct: 1059 GEMGIHSELDGTAEPTSSVNYERLEFIGDSLLKMMTTITVFNRTTCNEEGM-HCKRMEMI 1117
Query: 492 SNAALCKLGC--DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKK 549
SN LC + +++L +IR D W Y L R I +T + +
Sbjct: 1118 SNKRLCSVASSPEYELYRYIRAGTGD--RW-----RDTWYPEFLRQLKKGRVIKLTDKHR 1170
Query: 550 VKS---KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE------------ 594
+ KT+ADV EA IGA + T + D +GIK V +E
Sbjct: 1171 THALGKKTIADVCEATIGACIMTTQDLPTSTRFD-LGIKAITKLVGHEDHAITSWREILP 1229
Query: 595 -----RQFQVQAERLVN--VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
R + + N R + + Y F++P LL A TH S +P QRLEF
Sbjct: 1230 MYKAPRWSLAMNDPVANDLARKVYHVTGYRFKNPCLLRSAFTHSSDQNSPVPDL-QRLEF 1288
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGDA LD++ +L+ PT P LT+ + A V+N A +V G ++ I +S LY
Sbjct: 1289 LGDACLDWVCIWWLFRNNPTRGPQWLTEHKMAMVSNRFLAALAVILGFNRLISASSPALY 1348
Query: 708 KWINI----TVDSFERLSLESTFGWESETSF---PKALGDIIESLSGAIFVDSG 754
I ++ +E+ ++ F W TS PKAL D++ES GA+ VDSG
Sbjct: 1349 AEIGTYAAKVLELYEQEDVKPDF-WTRVTSGSAPPKALADLVESYLGAVLVDSG 1401
>gi|440468299|gb|ELQ37466.1| RNase3 domain-containing protein [Magnaporthe oryzae Y34]
gi|440485699|gb|ELQ65629.1| RNase3 domain-containing protein [Magnaporthe oryzae P131]
Length = 1658
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 187/437 (42%), Gaps = 79/437 (18%)
Query: 381 PELCRIIMGPMSLS------TFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIP 433
P+ C +++ + +S ++TF P+I++RL++ L+++ +N+ LD + I
Sbjct: 998 PQTCYLVLETLLISQIPVDTVVMAYTF-PAIIYRLENSLISLEACQNLGLDIPIDIALIA 1056
Query: 434 TSKVL-------EAITTKKCQEGFHLESLETLGDSFLKYAASQQLF-----KTYQNHHEG 481
+K EA + G + E LE LGD FLK A S L+ ++ H E
Sbjct: 1057 MTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEGDEFEYHVER 1116
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
+L I N L + L IR++ F+ + W PG L +K
Sbjct: 1117 MLD------ICNKNLLNWALESNLQEHIRSKSFNRRTWYPPG----------LKLLKGKK 1160
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-PYERQFQVQ 600
V + K++ADV EALIGA T F + V V V + + +Q
Sbjct: 1161 TEVDDEHALGDKSIADVCEALIGAAYLTAQAQSSPNF----DLAVKAVTVMTHSKTHTMQ 1216
Query: 601 A--------------------ERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEI 638
A +L +++ + Y F++P LL A H SY I
Sbjct: 1217 AWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENI 1276
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQRLEFLGD++LD + YL+ K+P P LT+ + A V+N + +V G H+H
Sbjct: 1277 P-SYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRH 1335
Query: 699 ILHASQEL----YKWINITVDSFE--------RLSLESTFG---WESETSFPKALGDIIE 743
++H L +W + E R E + W PK L DI+E
Sbjct: 1336 LIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCLPDILE 1395
Query: 744 SLSGAIFVDSGCNKEVV 760
+ GA+FVD+G + V
Sbjct: 1396 AYVGALFVDTGYDYSAV 1412
>gi|350631467|gb|EHA19838.1| hypothetical protein ASPNIDRAFT_119009 [Aspergillus niger ATCC 1015]
Length = 1232
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 193/440 (43%), Gaps = 73/440 (16%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV---LEAITTKKCQEGFHLESLET 457
F PSI H ++ ++A L+ L +++VT P ++ AI + SL
Sbjct: 810 FTPSISHEVEVYMIAQILRQEL---SLRSVT-PWQRIDLLAIAIRPTSIEHRATFRSLAF 865
Query: 458 LGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPK 517
+GD+F+KY + QLF + HEGLLS K R +S+A L L F+ ++ + K
Sbjct: 866 IGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLNGK 925
Query: 518 MWMIP---GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENV 574
W+ P G S NE + ++ + + T+AD+ +A++GA + GG N
Sbjct: 926 RWVPPLVSGIEPAS---------NEAR-----QRSIGAATLADMTKAVVGAAFTDGGLNQ 971
Query: 575 GLIFLDRIGIKVDFVNVP------YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEAL 628
+ K+ N Y + A + +E LL Y+F D SL VE++
Sbjct: 972 AAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVESM 1031
Query: 629 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL 688
TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 1032 THPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTF 1091
Query: 689 SSV---------------KHGLHKHILHASQELYKWINITVDS-------FERLSLESTF 726
++ +H +HK++ S L+ ++ + D+ F + S E
Sbjct: 1092 IAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKAD 1151
Query: 727 G-----WESETSFP----KALG------DIIESLSGAIFVDS-----GCNKEVVFESIRP 766
WE + +P +ALG DII+S+ GA+F+DS C+ I P
Sbjct: 1152 AIKHELWE-QRFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIVP 1210
Query: 767 LLEPMITPETMRLQPARELN 786
LLE I+ + P L
Sbjct: 1211 LLEHFISHQITTDHPKDTLQ 1230
>gi|393215463|gb|EJD00954.1| ribonuclease III [Fomitiporia mediterranea MF3/22]
Length = 1411
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 23/262 (8%)
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFVNVPYERQFQVQAE-RL 604
K VADV EA+IGA TGG + L + + V DF +V A R
Sbjct: 1052 KAVADVAEAIIGAAYVTGGREIALKVTKALNVPVPHIDRWSDFGRKALAPPPEVTARLRT 1111
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+++ +E+++ + F P LL +ALTH S E+ Y+RLEF+GDA+LD+L+ ++Y++
Sbjct: 1112 GSIQAVEAIIGHQFNHPHLLAQALTHASIHGNEM-TSYERLEFIGDAILDFLVIRHIYDR 1170
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-- 722
+LSPG LT ++ A V+N A V GLH+H+L S L K I E+ L
Sbjct: 1171 DSSLSPGALTLLKGAMVSNAALAAVCVWSGLHEHLLFESSALEKSIQSYAVELEQRQLAE 1230
Query: 723 --------ESTFGWESETSFPKALGDIIESLSGAIFVD---SGCNKEVVFESI-RPLLEP 770
+ + PKAL D++ES+ GA++V S E F+ + P +
Sbjct: 1231 HEQAAREDRQPGQYWVDVEPPKALSDVVESIFGAVYVSDNFSPIGAEKFFDKVLAPFYDQ 1290
Query: 771 MITPETMRLQPARELNEYCQKH 792
IT T+ P + L E Q
Sbjct: 1291 HITLHTLSHHPTKILFELFQSQ 1312
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 367 EKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC 426
E + P+K L PELC + + S + + + +PSI+ +L+ LL L DH
Sbjct: 792 ESKHHPAKY---LIPELC--VKSTIPASVYRTISLLPSIISKLEDFLLIKELNAKYFDH- 845
Query: 427 MQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVK 486
+I +L A+++ E LE LGD++LKY +S LF T+ HEG L V
Sbjct: 846 ----SIAEYDLLAAVSSPAAFVDVDYERLELLGDAYLKYLSSVYLFVTFPTLHEGALHVS 901
Query: 487 KDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIP 522
+ RIISN +L + LP +I+++P P+MW P
Sbjct: 902 RQRIISNRSLLRNANRCGLPQYIQSKPLAPRMWCPP 937
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI 699
Y+RLE LGDA L YL +VYL+ +PTL G L R ++N ++ + GL ++I
Sbjct: 867 YERLELLGDAYLKYLSSVYLFVTFPTLHEGALHVSRQRIISNRSLLRNANRCGLPQYI 924
>gi|116205049|ref|XP_001228335.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
gi|88176536|gb|EAQ84004.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
Length = 1227
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 140/291 (48%), Gaps = 20/291 (6%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+P+I H L+ L+A K++L Q S ++ AIT + E +E LGD
Sbjct: 916 MIPAITHALEVHLVA---KDLLESRLEQTGITDLSLIVTAITASAARGPTDYERIEFLGD 972
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
S LK+ + TY EG LS KD+I+SN+ L + D L +I + F W
Sbjct: 973 SILKFCTTINCSATYLKFPEGCLSPLKDKIVSNSRLFRAAVDFGLDRYIIHKAFTLHKW- 1031
Query: 521 IPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLD 580
+Y + D E T +++ +K +ADVVEALIG +GG + L +
Sbjct: 1032 -----RPTY-VED---LIENPPSATETRRISTKIIADVVEALIGTAFVSGGISKALACMS 1082
Query: 581 RIGIKVDFVNVPYERQFQVQA----ERLV-NVRHLESLLNYSFRDPSLLVEALTHGSYML 635
V + ++ Y R+ E L +R LESL+ Y+F +LLVEA+TH S
Sbjct: 1083 LFLPDVAWNSIEYGREVMYNEAPDDEPLPRTMRQLESLVGYTFTKKALLVEAMTHPSCNG 1142
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLY--NKYPTLSPGDLTDMRSASVNND 684
P I RLEFLGDA+LDY++ L+ + L L +R+A VN D
Sbjct: 1143 PGIRASLDRLEFLGDAILDYVVVNKLFAISDPAPLENSSLHLLRTALVNAD 1193
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 610 LESLLNYS-FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LES L + D SL+V A+T + P Y+R+EFLGD++L + T+ Y
Sbjct: 934 LESRLEQTGITDLSLIVTAITASAA---RGPTDYERIEFLGDSILKFCTTINCSATYLKF 990
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
G L+ ++ V+N ++V GL ++I+H + L+KW V+ +T
Sbjct: 991 PEGCLSPLKDKIVSNSRLFRAAVDFGLDRYIIHKAFTLHKWRPTYVEDLIENPPSAT--- 1047
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI 764
E+ K + D++E+L G FV G +K + S+
Sbjct: 1048 ETRRISTKIIADVVEALIGTAFVSGGISKALACMSL 1083
>gi|281427125|ref|NP_001163918.1| dicer 1, ribonuclease type III [Xenopus laevis]
gi|261826170|gb|ACX94846.1| truncated double-stranded RNA-specific endoribonuclease type III
[Xenopus laevis]
Length = 1795
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 46/221 (20%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRI--------------------------- 582
+ K++AD VEAL+G +L++ GE +FL +
Sbjct: 1528 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLDLKVLPEVRKPVTNTSTRGNYSLDGRT 1587
Query: 583 -------GIKVDFVNVPYERQFQ-VQAERLVN-----VRHLESLLNYSFRDPSLLVEALT 629
GI+ ++ +P F+ +AE+ ++ + E +NY F++ + L++A T
Sbjct: 1588 NSELSCKGIEYGYLKIPPRCMFEHPEAEKTLDHLISGFENFEKKINYQFKNKAYLLQAFT 1647
Query: 630 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALS 689
H SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 1648 HASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASL 1707
Query: 690 SVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGW 728
+VK+ HK+ S EL+ +D F + LE T GW
Sbjct: 1708 AVKYDYHKYFKAISPELFH----VIDDFVQFQLEKTKCKGW 1744
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE GDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1274 ILQALTLSNASDGFNLERLEMPGDSFLKHAITTYLFCTYPDSHEGRLSYMRSKKVSNCNL 1333
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG------DNSGSYELNDHS 535
+LG P + FDP + W+ PG NS +E N+ S
Sbjct: 1334 YRLGKKKGSPSRMVVSIFDPPVNWLPPGYIVNQDKNSDKWESNETS 1379
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE GD+ L + IT YL+ YP G L+
Sbjct: 1270 NPGLILQALTLSNASDGFNL-------ERLEMPGDSFLKHAITTYLFCTYPDSHEGRLSY 1322
Query: 676 MRSASVNN-DCYALSSVKHGLHKHILHASQELYKWI 710
MRS V+N + Y L K + ++ W+
Sbjct: 1323 MRSKKVSNCNLYRLGKKKGSPSRMVVSIFDPPVNWL 1358
>gi|451856503|gb|EMD69794.1| hypothetical protein COCSADRAFT_341850 [Cochliobolus sativus ND90Pr]
Length = 1575
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 204/485 (42%), Gaps = 81/485 (16%)
Query: 348 LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLST-FYSFTFV-PSI 405
+L +I +N L++ +++ E + + PE +I +L+T F +V P+I
Sbjct: 986 VLQAEKIPLRRNQLARIEDKEKGEFGNLKAYICPEPFQI----SNLATPFVVMCYVLPAI 1041
Query: 406 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK--------------KCQEGFH 451
+HR +S L+A+ N+L N+ + + LE++T K G +
Sbjct: 1042 IHRFESYLIALEACNVL------NLKVNPALALESLTKDSENSEEHDEEKINFKSGMGPN 1095
Query: 452 LESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGC---------- 501
E LE LGD FLK A S +F + +E V++ ++ N L +
Sbjct: 1096 YERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLMETAVGKKKVVSAEG 1155
Query: 502 ---DHKLPGFIRTEPFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
D +L +IRTE F + W G G+ + D ++ + K+
Sbjct: 1156 TEQDLQLYKYIRTESFSRRTWYPEGLKLLKGKGANKSQDD--------WLKLTHNLGDKS 1207
Query: 555 VADVVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP---------YERQFQ---- 598
+ADV EA IGA L TGG + + + F N P Y +Q
Sbjct: 1208 IADVCEAFIGAALQEHYTGGLWKPTDWDEAVKAVKLFANSPDHTMSKWSDYYEAYQKPKY 1267
Query: 599 ----VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAV 652
A L + +E Y F+ P LL A H SY M IP YQRLEF GDA+
Sbjct: 1268 QTADASAAMLDMAQKIEMKHPYHFKYPRLLRSAFAHPSYPYMYENIP-SYQRLEFAGDAL 1326
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN- 711
LD +LY KYP P LT+ ++ V+N VK G H HI + L I
Sbjct: 1327 LDMAFITHLYFKYPDKDPHWLTEHKTPMVSNKFLGAVCVKLGWHVHIKQNTATLTNQIRD 1386
Query: 712 --ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
+ + ER + + W + + PK L D+IE+ +IFVDS E F ++ E
Sbjct: 1387 YVLEAEEAEREAGGAVDYWVTISDPPKCLADVIEAYVASIFVDS----EFDFGVVQTFFE 1442
Query: 770 PMITP 774
+ P
Sbjct: 1443 MHLKP 1447
>gi|169610828|ref|XP_001798832.1| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
gi|160702165|gb|EAT83689.2| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
Length = 1443
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 185/783 (23%), Positives = 315/783 (40%), Gaps = 122/783 (15%)
Query: 47 ICTLYLPNNCPIQTVIAQG-NIKTL-KQTACLEACKKLHQIGALTDNLLPDV---VVEEH 101
+C + LP +CPI +++ Q + KT+ K +A + C +L + L + LLP + +
Sbjct: 571 VCEVILPEHCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLPTISKYLPAMR 630
Query: 102 DAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRT 161
+A +E + + P Q + H +I+ + D P + + R
Sbjct: 631 NALLAVSEKKKGNYAMVIKPTFWKQDRDTVPESLHLTIIDADRGL--DRPHQPLAMLTRR 688
Query: 162 ELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLN 221
++ L R V+ I LTP+ + + RF + +F
Sbjct: 689 PF-PQLPSFPIYLTDCRPSNIVSQSLHIPISLTPELLEMFTRFTLRIF-----------E 736
Query: 222 EILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTK 281
+I ++ D ++ Y +LP E + V S+S P ++ + N +
Sbjct: 737 DIYNKVYDYDVSKMSYWMLPVIEHRV--ASVRSMSNPQEV--LDMDQIRKVYNEPFWKWS 792
Query: 282 SGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLN-----------ANSLFTRN--DGGAIT 328
+I V + G+ YY + HL N F +N D
Sbjct: 793 PQSRTDDLIDRYFVDPMNGGRRYYSDRLAPHLKPQDPVPANVPRQNHKFMKNILDFSDSK 852
Query: 329 YKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIM 388
+ K + I + +L +I +N+L+ ++++E + + + PE I
Sbjct: 853 WMKSRD----ITRWHQDQPVLQVEKIPFRRNHLANVEDKEKKELANLETYICPEPLHI-- 906
Query: 389 GPMSLST-FYSFTFV-PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK-- 444
+L+T F +V P+I+HR +S L+A++ ++L ++ + + LEA+T
Sbjct: 907 --SNLATPFVVMCYVLPAIIHRFESYLIALDACDVL------DLKVSPALALEALTKDSD 958
Query: 445 ------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
K G + E LE LGD FLK A S +F +E V++ ++
Sbjct: 959 NSEEHGEEKINFKSGMGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLC 1018
Query: 493 NAALCKLGC-------------DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNE 539
N L + D +L ++RT+ F + W G L L
Sbjct: 1019 NQNLMETAVGKKKVASANGTERDLQLYKYVRTDAFSRRNWY----PEGLKLLRGKGLKKT 1074
Query: 540 RKIYVTGRKKVKSKTVADVVEALIGA-FLS--TGG--------ENVGLIFL-----DRIG 583
+ ++ + K+VADV EA IGA F+ GG E V + L D +
Sbjct: 1075 EEDWLNVTHNLGDKSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLM 1134
Query: 584 IK-VDFVNVPYERQFQ---VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPE 637
K D+ + ++Q A +L +E Y FR P LL A H S +M
Sbjct: 1135 EKWTDYYAAYTKPKYQTAGATATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPSQPFMWEN 1194
Query: 638 IPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHK 697
IP YQRLEFLGD++LD ++L+ KYP P LT+ ++ V+N ++ +++
Sbjct: 1195 IP-SYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVQIRDYVYE 1253
Query: 698 HILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
V+ ER + + W S + PK L D+IE+ AIFVDS +
Sbjct: 1254 ----------------VEEAEREANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDF 1297
Query: 758 EVV 760
VV
Sbjct: 1298 NVV 1300
>gi|167046032|gb|ABZ10547.1| dicer-like protein E [Trichoplax adhaerens]
Length = 359
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 164/368 (44%), Gaps = 52/368 (14%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EAIT Q+ F+LE LE LGD +L Y + + + + + + N L +
Sbjct: 1 EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60
Query: 499 LGCDHKLPGFIRTEPFDP-KMWMIPG--DNSGSYELNDHSLFNERKIYVTGRKKVKSKTV 555
LG ++P +I PF+ K W+ PG N EL S+ R+ + + K +
Sbjct: 61 LGAGRRIPYYIVGCPFNQNKSWVPPGFVINQTVSEL---SIAMSREY---THQPLTKKAI 114
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYERQFQVQA 601
AD VE LIG G N L F+ +G ++ DF Y
Sbjct: 115 ADCVEGLIGYLCLVCGRNSVLRFMRWLGFEISECLDGIQELIPSIDFRTNLYSE------ 168
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+E++LNYSFR+ SLL+ ALTH SY E Y++L FLGD +L Y I ++L
Sbjct: 169 ----TANSVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTLLIYQICLFL 223
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN-----ITVDS 716
Y +Y P D + N Y + ++ L K +LH S+EL I+ + D
Sbjct: 224 YTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADD 283
Query: 717 FERLS--LESTFGWESETSF-----------PKALGDIIESLSGAIFVDSGCNKEVVFES 763
+ S ++S ++ +T+ PK LGD ++ A+F+D+ +++
Sbjct: 284 VQSFSSTVQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPDEDTAGRI 343
Query: 764 IRPLLEPM 771
I LL P+
Sbjct: 344 INSLLNPI 351
>gi|171690380|ref|XP_001910115.1| hypothetical protein [Podospora anserina S mat+]
gi|170945138|emb|CAP71249.1| unnamed protein product [Podospora anserina S mat+]
Length = 1568
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 189/431 (43%), Gaps = 64/431 (14%)
Query: 379 LPPELCRIIMGPMSLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNML-------- 422
L P+ C +++ P+ +S Y+F P I+HR+ S L+A++ NML
Sbjct: 1011 LEPKQCFLVLEPLKISPLPVQVVAMAYNF---PVIIHRVDSNLVALDACNMLGLNIRPDL 1067
Query: 423 -LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
L+ ++ + +E + ++ G + E LE LGD+FLK A + ++ + E
Sbjct: 1068 ALEAFTKDSDNTDEQDVEQVNFQRGM-GNNYERLEFLGDAFLKMATTIAIYTLIPDKDEF 1126
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
V++ +I N L + KL +IR+ F+ + W G +L ++
Sbjct: 1127 EYHVERMVLICNRNLFNNALEVKLEEYIRSMAFNRRTWYPEG----------LTLKRGKR 1176
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGE----NVGLIFLDRI--------GIKVDFV 589
+ + + K++ADV EA+IGA T E ++ + + R+ D+
Sbjct: 1177 KDIRKKHVLADKSIADVCEAIIGAAYLTAQEAGNFDMAIQAVTRMVNDKNHTMQTWSDYY 1236
Query: 590 NVPYERQFQVQAERLVNVRHLESL---LNYSFRDPSLLVEALTHGSY--MLPEIPRCYQR 644
V + +Q V E + Y F+ P LL A H +Y ++P YQR
Sbjct: 1237 AVYKKPAWQTMPTNSVQEDMAEKFHKRMGYRFQYPRLLRSAFQHPTYPTSWEKLP-SYQR 1295
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQ 704
LEFLGDA+LD +L++++P P LT+ + A V+N +V G H+ + H+S
Sbjct: 1296 LEFLGDALLDMACIDHLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYIGFHRSLQHSSP 1355
Query: 705 ELYKWINITVDSFERLSL------------ESTFG---WESETSFPKALGDIIESLSGAI 749
+ I V E ES F W + PK L D IE+ GAI
Sbjct: 1356 AVQSEIASYVTEIEEALAAAKAAAVQEGKSESNFARDFWVDCSRPPKCLPDTIEAYVGAI 1415
Query: 750 FVDSGCNKEVV 760
FVDS + + V
Sbjct: 1416 FVDSSYDYQTV 1426
>gi|322798617|gb|EFZ20221.1| hypothetical protein SINV_06556 [Solenopsis invicta]
Length = 386
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 23/216 (10%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
P ++ +A TH SY + CYQRLEFLGDA+LD+LIT Y+Y K LSPG+LTD+RSA
Sbjct: 145 PYVIFQAFTHPSYTANGLTECYQRLEFLGDAILDFLITCYIYEKCGNLSPGELTDLRSAL 204
Query: 681 VNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF------ 734
VNN +A +V++GLH +L + +L + +D F + + + E +
Sbjct: 205 VNNITFACLAVRYGLHIALLAYAPKL----DEIIDRFVKFQEDRDYVVNDELLYVLIEEE 260
Query: 735 ----------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPA 782
PK LGD+ ESL GAI++DSG + ++E I L+ I + + QP
Sbjct: 261 ECNLVEYVDVPKVLGDLFESLIGAIYLDSGKDLVKIWEIIYTLMHKEIDEFSRSIPKQPV 320
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
R + E+ ++ T+ + G+ + ++V G
Sbjct: 321 RVIYEHTDLRPKFLEATLI-KGTGRVMIPLKVTIAG 355
>gi|251765118|sp|Q6ATG6.2|RTL2_ORYSJ RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2
Length = 317
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 9/197 (4%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y FRD LL EALTH S+ + YQRLEF+GD+ L + +
Sbjct: 31 ADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNF 88
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER- 719
LY PTL PG L+ +R+A+++ + A +V+H L+ + L + +++ ++
Sbjct: 89 LYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQE 148
Query: 720 ----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
LS G S PK L DI+E+++ A++VD + E +++ R L EP+IT E
Sbjct: 149 PEDDLSTVPYGG--SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE 206
Query: 776 TMRLQPARELNEYCQKH 792
T+ QP L+E CQKH
Sbjct: 207 TIDEQPVTMLHELCQKH 223
>gi|134079420|emb|CAK40801.1| unnamed protein product [Aspergillus niger]
Length = 1379
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 198/442 (44%), Gaps = 77/442 (17%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV-LEAI----TTKKCQEGFHLESL 455
F PSI H ++ ++A L+ L +++VT P ++ L AI T+ + + F L L
Sbjct: 892 FTPSISHEVEVYMIAQILRQEL---SLRSVT-PWQRIDLLAIAIRPTSIEHRATFRL--L 945
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
+GD+F+KY + QLF + HEGLLS K R +S+A L L F+ ++ +
Sbjct: 946 AFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLN 1005
Query: 516 PKMWMIP---GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
K W+ P G S NE + ++ + + T+AD+ +A++GA + GG
Sbjct: 1006 GKRWVPPLVSGIEPAS---------NEAR-----QRSIGAATLADMTKAVVGAAFTDGGL 1051
Query: 573 NVGLIFLDRIGIKVDFVNVP------YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVE 626
N + K+ N Y + A + +E LL Y+F D SL VE
Sbjct: 1052 NQAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVE 1111
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
++TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 1112 SMTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFL 1171
Query: 687 ALSSV---------------KHGLHKHILHASQELYKWINITVDS-------FERLSLES 724
++ +H +HK++ S L+ ++ + D+ F + S E
Sbjct: 1172 TFIAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEK 1231
Query: 725 TFG-----WESETSFP----KALG------DIIESLSGAIFVDS-----GCNKEVVFESI 764
WE + +P +ALG DII+S+ GA+F+DS C+ I
Sbjct: 1232 ADAIKHELWE-QRFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGI 1290
Query: 765 RPLLEPMITPETMRLQPARELN 786
PLLE I+ + P L
Sbjct: 1291 VPLLEHFISHQITTDHPKDTLQ 1312
>gi|226510363|ref|NP_001140816.1| uncharacterized protein LOC100272891 [Zea mays]
gi|194701228|gb|ACF84698.1| unknown [Zea mays]
gi|413948833|gb|AFW81482.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 376
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y F D +LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 35 ADRAEAAARVERLLRYQFCDRALLEEALTHQSF--SDGALSYQRLEFVGDAALGLAFSNF 92
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
LY PTL PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 93 LYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQE 152
Query: 721 SLE----STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET 776
+ + +G S PK L DI+E+++ A++VD + E +++ R L EP+IT ET
Sbjct: 153 LMHDLATAPYG-GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAET 211
Query: 777 MRLQPARELNEYCQKH 792
+ QP L+E CQKH
Sbjct: 212 IDEQPVTTLHELCQKH 227
>gi|242090101|ref|XP_002440883.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
gi|241946168|gb|EES19313.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
Length = 377
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y F D +LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 36 ADRAEAAVRVERLLRYQFCDRALLEEALTHQSF--SDGAFSYQRLEFVGDAALGLAFSNF 93
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
LY PTL PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 94 LYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCARLDLLVGQFIESVKQE 153
Query: 721 SLE----STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET 776
+ + +G S PK L DI+E+++ A++VD + E +++ R L EP+IT ET
Sbjct: 154 VMHDLATAPYG-GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPVITAET 212
Query: 777 MRLQPARELNEYCQKH 792
+ QP L+E CQKH
Sbjct: 213 VDEQPVTTLHELCQKH 228
>gi|295670335|ref|XP_002795715.1| RNase3 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284800|gb|EEH40366.1| RNase3 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1346
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 188/432 (43%), Gaps = 100/432 (23%)
Query: 365 RQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 424
R +Q + + ++ + PE RI P ++ F +FTF P+++ R++S L+A+ N L
Sbjct: 853 RTTEQEKGVETAYYICPEPLRISALPAPVAVF-AFTF-PAMISRIESYLIALEACNKL-- 908
Query: 425 HCMQNVTIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQ 470
+TI LEA+T + +E G + E LE LGD FLK + S
Sbjct: 909 ----QLTIIPELALEALTKDSDNTEEHRAEQIHFQRGMGKNYERLEFLGDCFLKMSTSIS 964
Query: 471 LFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYE 530
LF ++ E VK+ +I N L + F+RT+ F + W
Sbjct: 965 LFAMNADNDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRTQGFSRRNW----------- 1013
Query: 531 LNDHSLFNERKIYVTGRKKVKS-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV 589
Y G K +++ K++AD+ EALIGA L +GG F + FV
Sbjct: 1014 ------------YPEGIKLLQADKSIADICEALIGASLLSGGRVHR--FDTAVKAVTAFV 1059
Query: 590 N-----------------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS 632
N +P + + +L + + L Y F+ P LL A TH S
Sbjct: 1060 NSENHQVSDWQSYVGLYSLPRYQITEADDTQLDLAQQIGDRLGYRFKYPRLLSSAFTHAS 1119
Query: 633 Y--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSS 690
Y + ++P CYQRLEFLGD++LD + +LY+KYP P LT+ + S
Sbjct: 1120 YPTVWSKVP-CYQRLEFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKVFS---------- 1168
Query: 691 VKHGLHKHILHASQELYKWINITVDSFERL--SLESTFGWESETSFPKALGDIIESLSGA 748
H+ +L +RL S+ TFG P L +++E+ GA
Sbjct: 1169 ------NHLKMRGWKL---------KLQRLKASIHQTFGQR-----PVTLRNMLEAYIGA 1208
Query: 749 IFVDSGCNKEVV 760
IFVDS + EVV
Sbjct: 1209 IFVDSNFSFEVV 1220
>gi|167046034|gb|ABZ10548.1| dicer-like protein E [Placozoa sp. DMJ-2008]
Length = 359
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 170/361 (47%), Gaps = 38/361 (10%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EAIT Q+ F+LE LE LGD +L Y + + + + + + N L +
Sbjct: 1 EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60
Query: 499 LGCDHKLPGFIRTEPFDP-KMWMIPG--DNSGSYELNDHSLFNERKIYVTGRKKVKSKTV 555
LG ++P +I PF+ K W+ PG N EL S+ R+ + + K +
Sbjct: 61 LGAGRRIPYYIVGCPFNQNKSWVPPGFVINQTVSEL---SIAMSREY---THQPLTKKAI 114
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVN--VP-YERQFQVQAERLVNVR 608
AD VE LIG G N L F+ +G ++ D + +P + + + +E
Sbjct: 115 ADCVEGLIGYLCLVCGRNSVLRFMRWLGFEISECLDGIQELIPSIDFRANLYSE---TAN 171
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+E++LNYSFR+ SLL+ ALTH SY E Y++L FLGD +L Y I ++LY +Y
Sbjct: 172 SVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTLLIYQIYLFLYTQYTDY 230
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN-----ITVDSFERLS-- 721
P D + N Y + ++ L K +LH S+EL I+ + D + S
Sbjct: 231 QPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADDVQSFSST 290
Query: 722 LESTFGWESETSF-----------PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
++S ++ +T+ PK LGD ++ A+F+D+ +++ I LL P
Sbjct: 291 VQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPHEDTAGRIINSLLNP 350
Query: 771 M 771
+
Sbjct: 351 I 351
>gi|158706450|sp|A2QX45.2|DCL22_ASPNC RecName: Full=Dicer-like protein 2-2; Includes: RecName:
Full=Endoribonuclease dcl2-2; Includes: RecName:
Full=ATP-dependent helicase dcl2-2
Length = 1362
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 198/442 (44%), Gaps = 77/442 (17%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV-LEAI----TTKKCQEGFHLESL 455
F PSI H ++ ++A L+ L +++VT P ++ L AI T+ + + F L L
Sbjct: 875 FTPSISHEVEVYMIAQILRQEL---SLRSVT-PWQRIDLLAIAIRPTSIEHRATFRL--L 928
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
+GD+F+KY + QLF + HEGLLS K R +S+A L L F+ ++ +
Sbjct: 929 AFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLN 988
Query: 516 PKMWMIP---GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
K W+ P G S NE + ++ + + T+AD+ +A++GA + GG
Sbjct: 989 GKRWVPPLVSGIEPAS---------NEAR-----QRSIGAATLADMTKAVVGAAFTDGGL 1034
Query: 573 NVGLIFLDRIGIKVDFVNVP------YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVE 626
N + K+ N Y + A + +E LL Y+F D SL VE
Sbjct: 1035 NQAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVE 1094
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
++TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 1095 SMTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFL 1154
Query: 687 ALSSV---------------KHGLHKHILHASQELYKWINITVDS-------FERLSLES 724
++ +H +HK++ S L+ ++ + D+ F + S E
Sbjct: 1155 TFIAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEK 1214
Query: 725 TFG-----WESETSFP----KALG------DIIESLSGAIFVDS-----GCNKEVVFESI 764
WE + +P +ALG DII+S+ GA+F+DS C+ I
Sbjct: 1215 ADAIKHELWE-QRFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGI 1273
Query: 765 RPLLEPMITPETMRLQPARELN 786
PLLE I+ + P L
Sbjct: 1274 VPLLEHFISHQITTDHPKDTLQ 1295
>gi|317033008|ref|XP_001394728.2| hypothetical protein ANI_1_2258094 [Aspergillus niger CBS 513.88]
Length = 889
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 195/429 (45%), Gaps = 77/429 (17%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV-LEAI----TTKKCQEGFHLESL 455
F PSI H ++ ++A L+ L +++VT P ++ L AI T+ + + F L L
Sbjct: 402 FTPSISHEVEVYMIAQILRQEL---SLRSVT-PWQRIDLLAIAIRPTSIEHRATFRL--L 455
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
+GD+F+KY + QLF + HEGLLS K R +S+A L L F+ ++ +
Sbjct: 456 AFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLN 515
Query: 516 PKMWMIP---GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
K W+ P G S NE + ++ + + T+AD+ +A++GA + GG
Sbjct: 516 GKRWVPPLVSGIEPAS---------NEAR-----QRSIGAATLADMTKAVVGAAFTDGGL 561
Query: 573 NVGLIFLDRIGIKVDFVNVP------YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVE 626
N + K+ N Y + A + +E LL Y+F D SL VE
Sbjct: 562 NQAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVE 621
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
++TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 622 SMTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFL 681
Query: 687 ALSSV---------------KHGLHKHILHASQELYKWINITVDS-------FERLSLES 724
++ +H +HK++ S L+ ++ + D+ F + S E
Sbjct: 682 TFIAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEK 741
Query: 725 TFG-----WESETSFP----KALG------DIIESLSGAIFVDS-----GCNKEVVFESI 764
WE + +P +ALG DII+S+ GA+F+DS C+ I
Sbjct: 742 ADAIKHELWE-QRFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGI 800
Query: 765 RPLLEPMIT 773
PLLE I+
Sbjct: 801 VPLLEHFIS 809
>gi|145540581|ref|XP_001455980.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834199|emb|CAI44479.1| Dicer-like ribonuclease with helicase and Rnase III domains
[Paramecium tetraurelia]
gi|124423789|emb|CAK88583.1| unnamed protein product [Paramecium tetraurelia]
Length = 1797
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 199/461 (43%), Gaps = 80/461 (17%)
Query: 455 LETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPF 514
LE LGD+ LK +S ++F + +E LL +++ RI+SN L K H+ I+ F
Sbjct: 1327 LEFLGDANLKLLSSIEVFVQFPFANEHLLHLERARIVSNENLRKFSIIHRFFNCIKCTNF 1386
Query: 515 D--PKMWMIPGDNSGSYEL----------NDHSLFNERKIYVTGRKK----VKSKTVADV 558
D P +++ + E+ N + + +T K + K +DV
Sbjct: 1387 DYSPPEFLLDKNTQELSEIQPEKQKENKENTKYQYTQNGEVITELPKNYQPIPEKVHSDV 1446
Query: 559 VEALIGAFLSTGGENVGL--IFLDRIGI-KVDFVNVPYERQFQVQAERLV--NVRHLESL 613
VEAL GAFL E++ FL RIG+ K V + +QA+ L+ N+ LE++
Sbjct: 1447 VEALNGAFLIQYDEDINACQFFLHRIGVLKYPLAQVKLKNSTTLQAKGLLQKNLNSLENI 1506
Query: 614 LNYSFRDPSLLVEALTHGSYM--------------------------------------- 634
+ Y F D S+L++A+TH S++
Sbjct: 1507 IGYKFNDQSILIQAITHQSFLSVLDFYNYRKCKCNFVEFQNTKNILQISNLNQNDINESL 1566
Query: 635 -------LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
I Y+RLEFLGD+VLD ++ +L ++ DL + V N A
Sbjct: 1567 LTQLNQQQNRIDMSYERLEFLGDSVLDSVVVEWLVKEFNKEKVEDLALKKQCVVCNKALA 1626
Query: 688 LSSVKHGLHKHILH-----ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDII 742
L ++ + L + +LH + E ++ +N + + + + SE K LGD+
Sbjct: 1627 LVTLHYKLDQFLLHPTLHKVAHENHQTLNKIKQMYNEYYDDISKMYTSE-PIIKILGDVF 1685
Query: 743 ESLSGAIFVDSGCN----KEVVFESIRPLLEPMITPETMRLQPARELNEYCQ---KHHFS 795
ES+ GAIFVDS N K+VVF+ + P ++ +P + P L Y + + F
Sbjct: 1686 ESIVGAIFVDSSFNYDLTKQVVFKLLMPFMQHFTSPNQIIKNPQDRLFRYFKGKNQAEFE 1745
Query: 796 MKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
+ T ++G+ + + K A ++K+ +K+
Sbjct: 1746 IVMTDEDPVDGQNLYHLRDKNTYAVHKKIRATSEKQAREKL 1786
>gi|440632208|gb|ELR02127.1| hypothetical protein GMDG_05286 [Geomyces destructans 20631-21]
Length = 1377
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 194/468 (41%), Gaps = 81/468 (17%)
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPS-KISFELPPELCRIIMGPMSLSTFYSFTFVPSIMH 407
L RR F +++ SK E + + S K + LP E + PM +PSIMH
Sbjct: 848 LPKRRDFLHRSFASKSETENEVDCSEKPALFLPLESSTVDKLPMEY--VECSLLIPSIMH 905
Query: 408 RLQSLLLAVNLKNMLL-DHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYA 466
RL +A++L N + D N+ V+ A E + + LE +GDS LKY
Sbjct: 906 RLWRQAVALDLYNAVFEDQGFLNL----DYVITATNAPSANENSNYQRLEFIGDSVLKYL 961
Query: 467 ASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG--- 523
L+ + + EG LS KD+ ++N+ L + L +I T+ F + W P
Sbjct: 962 VCVNLYASQPSWPEGYLSRAKDQAVANSHLSRAALAVGLDRYIVTKTFTARKWSPPYIQD 1021
Query: 524 --DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGENVGLI--- 577
D + S E ++ + +K +ADVVEALIG AFL G E
Sbjct: 1022 ILDAASSPE----------------KRTLSTKVLADVVEALIGGAFLDRGYEAAATCISR 1065
Query: 578 FLD--RIGIKVDFVNVPYERQFQVQAERLVN--VRHLESLLNYSFRDPSLLVEALTHGSY 633
FL RI +D + L N + +E L+ Y F++ L+EA+TH S
Sbjct: 1066 FLPEMRITAPLDIFARGIHTESVFAPTSLANGHLADVERLIGYQFKNRGYLLEAITHPSC 1125
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
YQRLEF+GDA LD ++ ++ + P LS G + ++A VN A +
Sbjct: 1126 EHDSHTSSYQRLEFIGDATLDMIVVSFMIDNAPELSHGRMHLTKTAVVNAGFLAYLCMDA 1185
Query: 694 GLHK-------------------------HILHASQELYKWINITVDS-FER-------- 719
L + H+ + + IN + S ER
Sbjct: 1186 SLEQVVTDVALSPNHYSTGFTEVHSSKLVHLCQLMRHQHPEINTAMSSCLERYHKLQPAI 1245
Query: 720 ---LSLESTFGWESETSFPKA--LGDIIESLSGAIFVD-----SGCNK 757
++ + + W TS A L DI+ES+ GA+ +D S C K
Sbjct: 1246 ASAIAHGNEYPWVLLTSLAPAKFLSDIVESIIGAVLIDAAGDLSACKK 1293
>gi|224116530|ref|XP_002317324.1| predicted protein [Populus trichocarpa]
gi|222860389|gb|EEE97936.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E +LNY F++ L EALTH SY YQR+EFLGDA L ++ Y+Y Y
Sbjct: 4 SVFAVEKILNYKFKNKRHLEEALTHSSYT---DSASYQRMEFLGDAALGLALSNYVYLAY 60
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L PG L+ +R+A+++ + A ++KHGL++ + H + L + D+ +
Sbjct: 61 PQLDPGHLSLLRAANISTEKLARVAIKHGLYRFVRHNATALDDKVKEFSDAVSGEDDDDA 120
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPAR 783
+ PK L DI+ES++ A++VD + + + R +LEP++T E ++ QP
Sbjct: 121 LVYGGSIKAPKILADIVESVAAAVYVDVDFDLQTFWVIFRGILEPIVTLEDLQQQPQPVT 180
Query: 784 ELNEYCQKH 792
L E CQK
Sbjct: 181 MLFERCQKQ 189
>gi|413948832|gb|AFW81481.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 285
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y F D +LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 35 ADRAEAAARVERLLRYQFCDRALLEEALTHQSF--SDGALSYQRLEFVGDAALGLAFSNF 92
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
LY PTL PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 93 LYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQE 152
Query: 721 SLE----STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET 776
+ + +G S PK L DI+E+++ A++VD + E +++ R L EP+IT ET
Sbjct: 153 LMHDLATAPYG-GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAET 211
Query: 777 MRLQPARELNEYCQKH 792
+ QP L+E CQKH
Sbjct: 212 IDEQPVTTLHELCQKH 227
>gi|389747383|gb|EIM88562.1| hypothetical protein STEHIDRAFT_155914 [Stereum hirsutum FP-91666
SS1]
Length = 1722
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 553 KTVADVVEALIGAFLSTGGENVGL-------IFLDRIGIKVDFVNVPYERQFQVQAE-RL 604
KTVADV EA++GA TGG L I + R+ DF V A R
Sbjct: 1323 KTVADVAEAIVGAAYVTGGREAALKASKALCIAVPRVDRWSDFGRKALAPPPDVTARLRA 1382
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++ +E++L + F P LL +ALTHGS EI Y+RLEF+GDA+LD+++ ++Y++
Sbjct: 1383 GSIEAVEAILGHKFERPHLLAQALTHGSIQGYEI-TSYERLEFIGDAILDFMVIRHVYDR 1441
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF-----ER 719
LSPG +T ++ A V+N A + GL ++++ + L I E
Sbjct: 1442 DTKLSPGAMTLLKGAMVSNSALAAVCIWAGLDEYLMFEAPVLAHNIRAYAQKLREKQKEE 1501
Query: 720 LSLESTFG-----WESETSFPKALGDIIESLSGAIFVD---SGCNKEVVFESI-RPLLEP 770
+L G + ET PKAL D++ES+ GA ++ S E VF+ I +P +
Sbjct: 1502 YALAQQEGRSPGQYWLETEPPKALSDVVESIIGATYISDNFSPVGVEKVFDKILKPFYDK 1561
Query: 771 MITPETMRLQPARELNEYCQKH 792
IT +T+ P + L E Q
Sbjct: 1562 HITLQTLSHHPTKILFELFQAQ 1583
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 327 ITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-LPPELCR 385
+ Y K + + + +DQ L+ GR + N L+ ++ P+K + L PELC
Sbjct: 997 VEYCKEHRKNFQGLRNYDQPLIEVGR-VGVVMNVLNPVTKQST-PPTKPDVKYLIPELCC 1054
Query: 386 IIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKK 445
++ STF + +PSI R++ LLL L DH +I + AI+
Sbjct: 1055 KFT--IAASTFRTALLLPSITRRIEDLLLVKELNASFFDH-----SISEYHLHAAISAPS 1107
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
F E LE LGD++LKY +S LF T + HEG L + RIISN AL L
Sbjct: 1108 ASVEFDYERLELLGDAYLKYLSSIYLFVTNPSQHEGALHSARLRIISNKALLHNADAAGL 1167
Query: 506 PGFIRTEPFDPKMWMIP 522
P F++ + F K W P
Sbjct: 1168 PPFVQAKTFVAKFWQPP 1184
>gi|357464753|ref|XP_003602658.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355491706|gb|AES72909.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 344
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 136/249 (54%), Gaps = 9/249 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E ++ Y+FR+ +LL EALTH SY PE Y+RLEF+GDAVL + I+ +L+ Y
Sbjct: 8 SVAAVEKIIGYTFRNKNLLEEALTHSSY--PE-SVSYERLEFIGDAVLGHAISNHLFLVY 64
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ L+ +RSA+V+ + A ++V + LH++I + L + I + E+ +
Sbjct: 65 TNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAI 124
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM--RLQPAR 783
+ PK L D++ES++ A++VD + + ++ IR LLEP++T + + QP
Sbjct: 125 VLYGGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVT 184
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
L E C K+ K + NG + T V+ +G LF +D K+ AK A+K ++
Sbjct: 185 MLYEICHKN--GKKVDIRHSRNGDKS-TASVYVDGELFAVASSD-QKDIAKLDAAKSAVQ 240
Query: 844 SLKASFPGT 852
L+ P T
Sbjct: 241 KLERVLPIT 249
>gi|115387529|ref|XP_001211270.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195354|gb|EAU37054.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1344
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 155/333 (46%), Gaps = 32/333 (9%)
Query: 403 PSIMHRLQSLLLAVNLKNML-----LDHCMQNVTIPTSKVLEAITTKKCQE---GFHLES 454
P+I+ RL + L+ + L L++ ++ +T + E + + + G + E
Sbjct: 988 PAIISRLDAYLIGLEACKKLGLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMGKNYER 1047
Query: 455 LETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPF 514
LE LGD FLK A S LF + + +E V + +I N L +L FIR+ F
Sbjct: 1048 LEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFIRSRGF 1107
Query: 515 DPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE-- 572
W G + DHS +KI + + KT+ADV EALIGA L T G
Sbjct: 1108 SRDTWYPEG--LTLLQGRDHS----KKIGSESKHALAEKTIADVCEALIGAALLTPGPQH 1161
Query: 573 --NVGLIFLDRI--------GIKVDFVNVPYERQFQVQAERLVNV---RHLESLLNYSFR 619
++G+ + + D++++ ++Q QA + R +E L Y FR
Sbjct: 1162 RFDMGVRAVSAVVDSNEHNAASWRDYISLYSIPKYQEQAPDGSEIDLCRRVEEKLGYHFR 1221
Query: 620 DPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
P LL A TH SY +P CYQ LEFLGDA+LD + L+ ++P P LT+ +
Sbjct: 1222 YPRLLHSAFTHPSYPSAWARVP-CYQSLEFLGDALLDMVCVEDLFRRFPDRDPQWLTEHK 1280
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
A V+N +VK GLH H+ + S L I
Sbjct: 1281 MAMVSNKFLGALAVKLGLHTHLSYFSSALQSQI 1313
>gi|356555908|ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 285
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSM 796
LGDIIESL+GAI VDS NKEVV++SIRPLLEP++TPET++L P RELNE CQK + +
Sbjct: 171 VLGDIIESLAGAILVDSRFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKI 230
Query: 797 KKTVAPRINGKAAVTVEVHANGTLFKHTHAD-ADKETAKKVASKEVLKSLK 846
R +G +E+ A+G + ++ + A ++TAKK+A KE+L SLK
Sbjct: 231 VLEDVSRKDGVTNYRMELEADGVIHEYEYTGPALRDTAKKIACKEILNSLK 281
>gi|83772763|dbj|BAE62891.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869364|gb|EIT78563.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1374
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 183/441 (41%), Gaps = 78/441 (17%)
Query: 384 CRIIMGPMSLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKV 437
C + + P+ +S S P+I++RL + L+A L+ C ++++
Sbjct: 908 CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIA-------LEGCKTLDLSVKPEYA 960
Query: 438 LEAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLL 483
LEA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 961 LEAFTKDSDNTEEHRVQQIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDF 1020
Query: 484 SVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIY 543
V + +I N L +L + R+ F W D DH +KI
Sbjct: 1021 HVNRMCLICNKNLFNTALKKELYQYTRSRGFSRHTWY--PDGLTLLHGRDH----RKKIS 1074
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGG-ENVGLIFLDRIGIKVDFVN------VPYER- 595
+ ++ KTVADV EALIGA L +GG N + + + VD N Y
Sbjct: 1075 AESKHALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSS 1134
Query: 596 ----QFQVQAERLVNV---RHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
++Q Q+ + R +E L Y F+ P LL A TH SY ++P CYQRLE
Sbjct: 1135 YMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVP-CYQRLE 1193
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTD------------------MRSASVNNDCYAL 688
FLGD++LD + L+ +YP P LT+ ++ A V+N
Sbjct: 1194 FLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKVSVRLFVSTKHLLTITLQMAMVSNKFLGA 1253
Query: 689 SSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG---WESETSFPKA------LG 739
+VK GLH H+ H S L I + + ES W PK L
Sbjct: 1254 LAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENESQGAVDYWLVTKDPPKVRRCPGCLP 1313
Query: 740 DIIESLSGAIFVDSGCNKEVV 760
D++E+ GA FVDS VV
Sbjct: 1314 DMVEAYLGAAFVDSDFQFRVV 1334
>gi|336470988|gb|EGO59149.1| hypothetical protein NEUTE1DRAFT_60268 [Neurospora tetrasperma FGSC
2508]
gi|350292065|gb|EGZ73260.1| hypothetical protein NEUTE2DRAFT_107618 [Neurospora tetrasperma FGSC
2509]
Length = 1583
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 188/435 (43%), Gaps = 67/435 (15%)
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFV-----PSIMHRLQSLLLAVNLKNML-----LDHCM 427
++ P+ C +I+ PM +S + PSI+HR++S L+A++ +L D +
Sbjct: 1010 DVEPQQCFLILEPMRISPIPADVVAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLAL 1069
Query: 428 QNVTIPTSKVLEAITTKKCQE---GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
+ T + E K+ + G + E LE LGDSFLK A + ++ + E
Sbjct: 1070 EAFTKDSDNSDEHDAEKENYQTGMGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYH 1129
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V++ +I N L + L +IR+ F+ + W G L + R+ +V
Sbjct: 1130 VERMLLICNKNLFNNALEIGLEEYIRSMSFNRRQWYPEG-----LILKKGKSKDARQRHV 1184
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGEN---------VGLIFLD---RIGIKVDFVNVP 592
+ K++ADV EALIGA TG E V + D R+ D+ V
Sbjct: 1185 -----LADKSIADVCEALIGAAYLTGQEKGSFDLAIKAVTAMVKDKKHRMISYGDYYAVY 1239
Query: 593 YERQFQV----QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
+ +Q A+R + + L YSF+ P LL A H +Y + +P YQRLE
Sbjct: 1240 QKPNWQTDPANSAQRDM-AKKFSERLGYSFKHPRLLRAAFQHPTYPSLYERLP-SYQRLE 1297
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
FLGDA+ D + YL+ K+P P LT+ + A V+N S G +K I S +
Sbjct: 1298 FLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSFHLGFNKCIATMSPSI 1357
Query: 707 YKWI---------------------NITVDSFERLSLESTFGWESETSFPKALGDIIESL 745
K I T D + R + + PK L D++E+
Sbjct: 1358 LKDIAEYVAEIEEALEAAKEEAIKAGTTADEYSR---DYWVHITHASRLPKCLSDVVEAY 1414
Query: 746 SGAIFVDSGCNKEVV 760
GAIFVDS + VV
Sbjct: 1415 IGAIFVDSEYDYSVV 1429
>gi|407917735|gb|EKG11039.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1216
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 160/347 (46%), Gaps = 29/347 (8%)
Query: 358 QNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVN 417
+++L R Q + LP + I P S + F +F +PSI+HR + ++
Sbjct: 594 RDFLHYIRDVSQHRMYSKEYILPAKDFVIDGSPASYAKFAAF--IPSIIHRYELFMIVQE 651
Query: 418 LKNMLL-DHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
L N + D +N + VL AIT E + + LE LGD LK+ + QL
Sbjct: 652 LCNTAIKDVDFENYEM----VLRAITASSTNENDY-QRLEFLGDCILKFNTAVQLMAGNL 706
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
+ E L+ KKDR++SN +L K L FI T F W +ND +
Sbjct: 707 HWPESYLTEKKDRVVSNGSLAKASRRAGLDRFIITRAFTGAKWR-------PRYVND--V 757
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 596
I + ++ + SKT+ADVVE+LIGA GG + + + K+ + + R
Sbjct: 758 LALAAIELPEKRDLSSKTLADVVESLIGAAYIEGGMPKANLCIATLLPKLSWCPLDESRH 817
Query: 597 FQVQ-------AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEF 647
+ + +++ E L+ Y+F++ LL+EALTH S+ YQRLEF
Sbjct: 818 ILAKHAAEDHISAPPIHLERAEELIGYTFKNKYLLLEALTHPSFTSYRDATTSSYQRLEF 877
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHG 694
LGDAVLDYLI+ L+ LS D T ++ YA + HG
Sbjct: 878 LGDAVLDYLISRRLHAYRKPLS-ADSTSQKNPPPRG--YAPDELPHG 921
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD +L + V L LT+ + V+N A +S + GL + I+
Sbjct: 682 YQRLEFLGDCILKFNTAVQLMAGNLHWPESYLTEKKDRVVSNGSLAKASRRAGLDRFIIT 741
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
+ KW V+ L+L + E K L D++ESL GA +++ G K
Sbjct: 742 RAFTGAKWRPRYVNDV--LALAAIELPEKRDLSSKTLADVVESLIGAAYIEGGMPK 795
>gi|449299331|gb|EMC95345.1| hypothetical protein BAUCODRAFT_46072, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1298
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 184/431 (42%), Gaps = 75/431 (17%)
Query: 376 SFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS 435
SF L E C + P+ + F +F +PSIMH++ + + ++ M +Q++ +
Sbjct: 854 SFAL--EDCTVEKTPLRSARFAAF--IPSIMHQVD---VRLTVQEMQHSSVLQDLQLKNG 906
Query: 436 KVL-EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
++ EAI+ E LE LGD+ LK+ S + + E L+++K R +SN
Sbjct: 907 DLIQEAISAPSAAEKSDYNRLEYLGDALLKFWVSINVMVLHPTWPEKYLTMEKSRRVSNN 966
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVT--------G 546
L + + +L +I T+ F W R IY +
Sbjct: 967 TLAQAAHNLQLNRWILTKSFTGTKW--------------------RPIYASEVLRTDFSQ 1006
Query: 547 RKKVKSKTVADVVEALIGA-FLSTGGENVGLI---FLDRIGIKVDFVNVPYERQFQVQAE 602
K++ SKT+ADVVEALIGA +L G +N L + + + + A
Sbjct: 1007 PKQISSKTLADVVEALIGAAYLDGGYQNAYTCIRSLLKQCWSEHYLICSSLRGHMEQTAA 1066
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V+ L + + FR P LL+EALTH S Y+RLEFLGDAVLD +I YL
Sbjct: 1067 DQVS-SDLGRFIGHHFRFPYLLIEALTHASLPFQRRMMSYERLEFLGDAVLDAIIVPYLC 1125
Query: 663 NKYPTLSPGDLTDMRSASVN-----------------------NDCYALSSVKHGLH-KH 698
L ++ D+ A VN D + +S+ L
Sbjct: 1126 GNARKLKASEMHDIHEALVNEHFLGYCCLNAKIEQEYRTVEKTGDGHDVSTATRTLKLAD 1185
Query: 699 ILHASQELYKWINITVDSFER--------LSLESTFGWES--ETSFPKALGDIIESLSGA 748
+ A +L K + + +F+R L+ + W + PKA D++ES+ GA
Sbjct: 1186 FIRAGGQLLKAKQVAMANFDRYQDAVATALADGEEYPWPDLIAMNLPKAFSDVVESVLGA 1245
Query: 749 IFVDSGCNKEV 759
+++D+ + V
Sbjct: 1246 LYIDTDGDMSV 1256
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
Y RLE+LGDA+L + +++ + +PT LT +S V+N+ A ++ L++ IL
Sbjct: 924 YNRLEYLGDALLKFWVSINVMVLHPTWPEKYLTMEKSRRVSNNTLAQAAHNLQLNRWILT 983
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
S KW I L + F + S K L D++E+L GA ++D G +
Sbjct: 984 KSFTGTKWRPIYASEV----LRTDFSQPKQIS-SKTLADVVEALIGAAYLDGGYQN--AY 1036
Query: 762 ESIRPLLE 769
IR LL+
Sbjct: 1037 TCIRSLLK 1044
>gi|313212467|emb|CBY36441.1| unnamed protein product [Oikopleura dioica]
Length = 2196
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 173/405 (42%), Gaps = 86/405 (21%)
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
P S +L A+T + F+LE LE GDSF+K A ++ L++ Y + +G L+ + IS
Sbjct: 1670 PPSLLLRALTQPTANDFFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYIS 1729
Query: 493 NAALCKL--------GC------------DHKLPGFIRT--------EPFDPKM--WMIP 522
NA KL C K G IR E F P W
Sbjct: 1730 NANFLKLLKLRLSDGSCLQIPRYMNCYDNSRKTSGVIRAPGYVYSYNENFCPNAQPWYKL 1789
Query: 523 GDNSGSYE----LNDHSLF---NERK-----IYVTGRKKVKSKTVADVVEALIGAFLSTG 570
DN E + D S F N R ++ + K K ADVVE+LIGA+L TG
Sbjct: 1790 DDNGDETEIFPPMTDCSQFVSENFRDTHFNYMFFDSKDKRVDKKTADVVESLIGAYLVTG 1849
Query: 571 GENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN--------VRHLESLLNYSFRDPS 622
GE + F+ + + + + + E LV + L++ L Y+F+ P
Sbjct: 1850 GEKMAARFVIMLN---NLYKMTVDSSPEFLEEDLVEPDPRTQSIIDELQNELEYTFKTPH 1906
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY-PTLSPGDLTDMRSASV 681
L AL Y + ++RLEFLGDAVLDYL+ LYN+ L G LTD++ +
Sbjct: 1907 LCRLALAKKKYT-KDPKDNFERLEFLGDAVLDYLVVDELYNRRSAALDSGQLTDLKQSIT 1965
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWIN--ITVDSFERLSLESTFG------------ 727
+N+ + + GL + L + I+ ++ F+ L + G
Sbjct: 1966 SNNLFGSLAFCMGLPQSTLMKASAAKDHISCMYKLEQFKNLLNKPKHGVPLNPDLKRVLE 2025
Query: 728 ---WESETS------------FPKALGDIIESLSGAIFVDSGCNK 757
W ++TS PK GD+ ES+ GA+++D CN+
Sbjct: 2026 KANWNNKTSNRAGPYSSYLLDIPKWFGDVFESMFGAVWLD--CNQ 2068
>gi|358348326|ref|XP_003638198.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
gi|355504133|gb|AES85336.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
Length = 472
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 136/249 (54%), Gaps = 9/249 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E ++ Y+FR+ +LL EALTH SY PE Y+RLEF+GDAVL + I+ +L+ Y
Sbjct: 113 SVAAVEKIIGYTFRNKNLLEEALTHSSY--PE-SVSYERLEFIGDAVLGHAISNHLFLVY 169
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ L+ +RSA+V+ + A ++V + LH++I + L + I + E+ +
Sbjct: 170 TNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAI 229
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM--RLQPAR 783
+ PK L D++ES++ A++VD + + ++ IR LLEP++T + + QP
Sbjct: 230 VLYGGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVT 289
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
L E C K+ K + NG + T V+ +G LF +D K+ AK A+K ++
Sbjct: 290 MLYEICHKN--GKKVDIRHSRNGDKS-TASVYVDGELFAVASSD-QKDIAKLDAAKSAVQ 345
Query: 844 SLKASFPGT 852
L+ P T
Sbjct: 346 KLERVLPIT 354
>gi|85105148|ref|XP_961898.1| hypothetical protein NCU08270 [Neurospora crassa OR74A]
gi|74616659|sp|Q7S8J7.1|DCL1_NEUCR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl-1; Includes: RecName:
Full=ATP-dependent helicase dcl-1
gi|28923482|gb|EAA32662.1| predicted protein [Neurospora crassa OR74A]
Length = 1584
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 189/431 (43%), Gaps = 59/431 (13%)
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFV-----PSIMHRLQSLLLAVNLKNML-----LDHCM 427
++ P+ C +I+ PM +S + PSI+HR++S L+A++ +L D +
Sbjct: 1011 DVEPQQCFLILEPMRISPIPADVVAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLAL 1070
Query: 428 QNVTIPTSKVLEAITTK---KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
+ T + E K + G + E LE LGDSFLK A + ++ + E
Sbjct: 1071 EAFTKDSDNSDEHDAEKENFQTGMGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYH 1130
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V++ +I N L + L +IR+ F+ + W G L + R+ +V
Sbjct: 1131 VERMLLICNKNLFNNALEIGLEEYIRSMSFNRRQWYPEG-----LILKKGKSKDARQRHV 1185
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGEN---------VGLIFLD---RIGIKVDFVNVP 592
+ K++ADV EALIGA TG E V + D R+ D+ V
Sbjct: 1186 -----LADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVKDKKHRMISYGDYYAVY 1240
Query: 593 YERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEF 647
+ +Q ++ + + Y F+ P LL A H +Y + +P YQRLEF
Sbjct: 1241 QKPTWQTESANSAQRDMAKKFSERMGYKFKHPRLLRAAFQHPTYPSLYERLP-SYQRLEF 1299
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS---- 703
LGDA+ D + YL+ K+P P LT+ + A V+N S G +K I S
Sbjct: 1300 LGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSFHLGFNKCIATMSPSIL 1359
Query: 704 QELYKWINITVDSFERLSLESTFGWESETSF--------------PKALGDIIESLSGAI 749
+++ +++ ++ E E+ ++ + PK L D++E+ GAI
Sbjct: 1360 KDIAEYVTEIEEALETAKQEAINAGKTADEYSRDYWVHITHASRLPKCLSDVVEAYIGAI 1419
Query: 750 FVDSGCNKEVV 760
FVDS + VV
Sbjct: 1420 FVDSEYDYSVV 1430
>gi|328849595|gb|EGF98772.1| hypothetical protein MELLADRAFT_79606 [Melampsora larici-populina
98AG31]
Length = 1540
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 186/401 (46%), Gaps = 56/401 (13%)
Query: 399 FTFVPSIMHRL------QSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHL 452
F+F+P++ RL Q+LL +++ ++ LD +T P V +
Sbjct: 906 FSFIPALTRRLHDASQVQALLKKIDVPHVSLDLATMALTQPGIDV-----------PWDY 954
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
++LET+GD+FLK A S ++ ++ EG +S + + + N L L ++ +
Sbjct: 955 QTLETVGDAFLKLATSVHVYLSHTKKGEGDMSALRSKSVDNEYLRSKSLQAGLGSYVLSS 1014
Query: 513 PFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
+ D + L+D L ++ ++K+ + ++D+VEAL+GA L +GG
Sbjct: 1015 RYR-------TDTFRAAHLDDGPLLPTGEV----QRKIPRRVLSDIVEALLGAGLLSGGI 1063
Query: 573 NVGLIFLDRIGIKVDF---------------VNVPYERQFQVQAERLVNVRHLESLLNYS 617
L +IG ++D ++ PY Q + L+ + Y
Sbjct: 1064 QTAL----KIGTELDLCFGGVTPWTERPCKALDEPYPDAASSQWTKSHTA--LQHKIGYE 1117
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F+ P LL++ALTH S + CY+R E+LGDA++D IT + Y ++ + LT R
Sbjct: 1118 FKQPLLLMQALTHRS-ADSFLTNCYEREEWLGDAIVDLWITEHCYRRFSDSTAAQLTFTR 1176
Query: 678 SASVNNDCYALSSVKH-GLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF-- 734
++ V N S+K GLHK I H S+ K + + E +F SF
Sbjct: 1177 ASLVTNASLGYLSLKKLGLHKMIQHDSRHFEKACDDALRDIESFIEVGSFYDNLTNSFIV 1236
Query: 735 ---PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
PK LGD +E++ GAIF+D G + V + S+ + E ++
Sbjct: 1237 FDPPKILGDALEAIVGAIFIDCGLHLSVAYRSLDKIFEDVL 1277
>gi|449459642|ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 338
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 135/247 (54%), Gaps = 13/247 (5%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V LE +L+Y+F + SLL EALTH SY Y+RLEF+GD+ + +T Y +
Sbjct: 4 SVIALERILSYNFNNKSLLEEALTHPSY---SASASYERLEFVGDSAIGLAVTNYFFLAS 60
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE-S 724
P L G L+ +R+A+V+ + A +V HGL+ ++ S + + VDS ++LE S
Sbjct: 61 PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDS---VALEGS 117
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPA 782
+ + PK L DI+ES++GAI+VD + + ++ IR LLEP+ T E +++ QP
Sbjct: 118 SVPYGGMMKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPV 177
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
L + CQ++ + + NG ++ VH +G F + + KE A+ A++E L
Sbjct: 178 TVLFQVCQRN--GKQVDIKHWKNGSNSIA-SVHVDGK-FVASGSSMQKEIARLNAAREAL 233
Query: 843 KSLKASF 849
L S
Sbjct: 234 IKLSDSM 240
>gi|367055364|ref|XP_003658060.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
gi|347005326|gb|AEO71724.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
Length = 1118
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 30/295 (10%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+P+I+H L++ L+A K++L + S V+ AI+T + E +E LGD
Sbjct: 826 LIPAIVHALEAHLVA---KDLLESRLERTGITDLSLVVMAISTSAARGPTDYERIEFLGD 882
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
S LK+ + Y + EG LS KD+I+SN+ L + + L +I + W
Sbjct: 883 SILKFCTTINCAAKYLKYPEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVHKTLTLHKW- 941
Query: 521 IPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL---- 576
+Y + E T + + +KT+ADVVEALI A +GG L
Sbjct: 942 -----RPTYVED----LLENPPPATRTRMLSTKTLADVVEALIAASYISGGIPKALACMS 992
Query: 577 IFLDRI-------GIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALT 629
+FL G ++ + P++ V +R LESL+ Y+F +LLVEA+T
Sbjct: 993 LFLPEFEWKSIEQGREILYNEAPHDEPLPV------TMRPLESLIGYTFTKKALLVEAMT 1046
Query: 630 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
H S P I RLEFLGDA+LDY++ L++ L L +R+A VN D
Sbjct: 1047 HPSCTGPGIRASLDRLEFLGDAILDYIVVNRLFSDPAGLDNSTLHLLRTALVNAD 1101
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 610 LESLLNYS-FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LES L + D SL+V A++ + P Y+R+EFLGD++L + T+ KY
Sbjct: 844 LESRLERTGITDLSLVVMAISTSAA---RGPTDYERIEFLGDSILKFCTTINCAAKYLKY 900
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
G L+ ++ V+N ++V+ GL ++I+H + L+KW V+ +T
Sbjct: 901 PEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVHKTLTLHKWRPTYVEDLLENPPPAT--- 957
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI 764
+ K L D++E+L A ++ G K + S+
Sbjct: 958 RTRMLSTKTLADVVEALIAASYISGGIPKALACMSL 993
>gi|18402610|ref|NP_566661.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
gi|75274109|sp|Q9LTQ0.1|RTL2_ARATH RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2; AltName: Full=Ribonuclease
three-like protein 2
gi|9294562|dbj|BAB02825.1| unnamed protein product [Arabidopsis thaliana]
gi|332642855|gb|AEE76376.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
Length = 391
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 136/246 (55%), Gaps = 16/246 (6%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +LNY F + SLL EA+TH S + P Y+RLEF+GD+ + I+ YLY YP+L
Sbjct: 63 VEKILNYKFSNKSLLKEAITHTS--CTDFP-SYERLEFIGDSAIGLAISNYLYLTYPSLE 119
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL---YKWINITVDSFERLSLESTF 726
P DL+ +R+A+V+ + A S+ HGL+ + + L K + V + LS+ ++
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSV--SY 177
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARE 784
G PK L D+ ESL+GA++VD + + ++ R LLEP++T + ++ QP
Sbjct: 178 G--GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSM 235
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L + C KH + + +G ++ V ++ + L A+ +K+ A+ +A+KE L+
Sbjct: 236 LFKLCHKH--KKRIDIKNWKDGNVSIAV-IYLDDELLASGRAE-NKDIARLIAAKEALRK 291
Query: 845 LKASFP 850
L FP
Sbjct: 292 LSEVFP 297
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EAIT C + E LE +GDS + A S L+ TY + LS+ + +S L +
Sbjct: 79 EAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLAR 138
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS-KTVAD 557
+ +H L F+R P + E ++ ++ E + V+ VK+ K +AD
Sbjct: 139 VSLNHGLYSFLRRN--------APSLDEKVKEFSE-AVGKEDDLSVSYGGLVKAPKVLAD 189
Query: 558 VVEALIGA 565
+ E+L GA
Sbjct: 190 LFESLAGA 197
>gi|17511264|gb|AAK68755.2| Unknown protein [Arabidopsis thaliana]
gi|20148705|gb|AAM10243.1| unknown protein [Arabidopsis thaliana]
Length = 391
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 136/246 (55%), Gaps = 16/246 (6%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +LNY F + SLL EA+TH S + P Y+RLEF+GD+ + I+ YLY YP+L
Sbjct: 63 VEKILNYKFSNKSLLKEAVTHTS--CTDFP-SYERLEFIGDSAIGLAISNYLYLTYPSLE 119
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL---YKWINITVDSFERLSLESTF 726
P DL+ +R+A+V+ + A S+ HGL+ + + L K + V + LS+ ++
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSV--SY 177
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARE 784
G PK L D+ ESL+GA++VD + + ++ R LLEP++T + ++ QP
Sbjct: 178 G--GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSM 235
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L + C KH + + +G ++ V ++ + L A+ +K+ A+ +A+KE L+
Sbjct: 236 LFKLCHKH--KKRIDIKNWKDGNVSIAV-IYLDDELLASGRAE-NKDIARLIAAKEALRK 291
Query: 845 LKASFP 850
L FP
Sbjct: 292 LSEVFP 297
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EA+T C + E LE +GDS + A S L+ TY + LS+ + +S L +
Sbjct: 79 EAVTHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLAR 138
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS-KTVAD 557
+ +H L F+R P + E ++ ++ E + V+ VK+ K +AD
Sbjct: 139 VSLNHGLYSFLRRN--------APSLDEKVKEFSE-AVGKEDDLSVSYGGLVKAPKVLAD 189
Query: 558 VVEALIGA 565
+ E+L GA
Sbjct: 190 LFESLAGA 197
>gi|432096208|gb|ELK27069.1| Endoribonuclease Dicer [Myotis davidii]
Length = 1970
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 108/233 (46%), Gaps = 53/233 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P Q
Sbjct: 1542 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTEHEKAMCPARENCSSQ 1601
Query: 601 AERLVNVR--------------------------------------HLESLLNYSFRDPS 622
L R + E +NY F++ +
Sbjct: 1602 QRSLSGSRAAAAGKDVEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEEKINYRFKNKA 1661
Query: 623 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVN 682
L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VN
Sbjct: 1662 YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN 1721
Query: 683 NDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESETS 733
N +A +VK+ HK+ S EL++ +D F + LE G +SE S
Sbjct: 1722 NTIFASLAVKYDYHKYFKAVSPELFQ----VIDVFVQFQLEKNEMQGMDSEVS 1770
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1347 YRLGKKRGLPSRMVVSIFDPPVNWLPPG 1374
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKH 792
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + + P REL E +
Sbjct: 1853 PKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE- 1911
Query: 793 HFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
+ K + A R +GK VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1912 --TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1965
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1283 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1335
Query: 676 MRSASVNN-DCYALSSVKHGLHKHIL 700
MRS V+N + Y L K GL ++
Sbjct: 1336 MRSKKVSNCNLYRLGK-KRGLPSRMV 1360
>gi|389635425|ref|XP_003715365.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|374095503|sp|A4RHU9.3|DCL2_MAGO7 RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|351647698|gb|EHA55558.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|440467937|gb|ELQ37130.1| hypothetical protein OOU_Y34scaffold00618g20 [Magnaporthe oryzae Y34]
gi|440483523|gb|ELQ63906.1| hypothetical protein OOW_P131scaffold00922g30 [Magnaporthe oryzae
P131]
Length = 1485
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 201/496 (40%), Gaps = 95/496 (19%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL--KNMLLDHCMQN 429
P + + +P +LC P +L VPSI ++ +A L + L ++
Sbjct: 947 PRRFDYIIPEQLCTFDTVPATLVQL--GMLVPSITQAMEPYFVAQELLRRTALGSLDFKD 1004
Query: 430 VTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDR 489
+ + V+ IT+ + E +E LGD+ LK A+ + EG LS+ KDR
Sbjct: 1005 IDL----VMMVITSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFPEGYLSLLKDR 1060
Query: 490 IISNAALCKLGCDHKLPGFIRTEPFDPKMW--MIPGDNSGSYELNDHSLFNERKIYVTGR 547
++SN+ LCK L FI T + K W M+ T
Sbjct: 1061 LVSNSRLCKAATALGLDQFIITRQYSLKQWRNMLTAPEPP-----------------TNT 1103
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-- 605
+K+ SKT+ADV EALIGA GG + L + + +P ER + R V
Sbjct: 1104 RKMSSKTLADVTEALIGAAYIEGGMSKALRCISLM--------IPNERWRSLDESRAVLY 1155
Query: 606 -----------NVRHLESLLNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLGDAVL 653
+ LE LL YSF SLL+EA+TH SY +P +RLEFLGD+VL
Sbjct: 1156 QVALNDIPLPSTLGPLEELLGYSFNKKSLLIEAITHASYNIPGSAGSSLERLEFLGDSVL 1215
Query: 654 DYLITVYLYN-KYPT-LSPGDLTDMRSASVNNDCYALSSVKH------------------ 693
D+++ L++ K P + ++ +R+A VN + +++
Sbjct: 1216 DFVVVARLFSVKDPAPIEHYNMHLLRTAVVNGEFLGFLAMEWRTAATQRSVVVRTGQGTA 1275
Query: 694 --------------GLHKHILHA----SQELYKWINITVDSFERLSLE--STFGWE--SE 731
G +H Q+L + + + R +LE + W+ +
Sbjct: 1276 DELETVETPGLPLFGFLRHNASGDWVRDQQLAEERHAEMAPGIRDALEHGQRYPWDLLAR 1335
Query: 732 TSFPKALGDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
K D++E++ GA++VDSG C K + I L+ + L P EL
Sbjct: 1336 LRISKVHSDVLEAVIGAVWVDSGSLEECEKLIERVGILRYLDRALRDGVKILHPKEELGR 1395
Query: 788 YCQKHHFSMKKTVAPR 803
Q + K A R
Sbjct: 1396 VAQNNKVVYKVDKAKR 1411
>gi|313224452|emb|CBY20242.1| unnamed protein product [Oikopleura dioica]
Length = 2082
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 171/396 (43%), Gaps = 80/396 (20%)
Query: 433 PTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
P S +L A+T + F+LE LE GDSF+K A ++ L++ Y + +G L+ + IS
Sbjct: 1670 PPSLLLRALTQPTANDFFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYIS 1729
Query: 493 NAALCKL--------GC------------DHKLPGFIRTEPFDPKMWMIPGDNSGSYE-- 530
NA KL C K G IR + ++ D++G
Sbjct: 1730 NANFLKLLKLRLSDGSCLQIPRYMNCYDNSRKTSGVIRAPGY---LYSYKLDDNGDETDI 1786
Query: 531 ---LNDHSLFNERK--------IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
+ D S F ++ + K K ADVVE+LIGA+L TGGE + F+
Sbjct: 1787 FPPVTDCSQFVSETFRDTHFNYMFFDSKDKRVDKKTADVVESLIGAYLVTGGEKMAARFV 1846
Query: 580 DRIGIKVDFVNVPYERQFQVQAERLVN--------VRHLESLLNYSFRDPSLLVEALTHG 631
+ + + + + E LV + L++ L Y+F+ P L AL
Sbjct: 1847 IMLN---NLYTMTVDSSPEFLEEDLVEPDPRTQSIIDELQNELEYTFKTPHLCRLALAKK 1903
Query: 632 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY-PTLSPGDLTDMRSASVNNDCYALSS 690
Y + ++RLEFLGDAVLDYL+ LYN+ L G LTD++ + +N+ + +
Sbjct: 1904 KYT-KDPKDNFERLEFLGDAVLDYLVVDELYNRRSAALDSGQLTDLKQSITSNNLFGSLA 1962
Query: 691 VKHGLHKHILHASQELYKWIN--ITVDSFERLSLESTFG---------------WESETS 733
GL + L + I+ ++ F+ L + G W ++TS
Sbjct: 1963 FCMGLPQSTLMKASAAKDHISCMYKLEQFKNLLNKPKHGVPLNPDLKRVLEKANWNNKTS 2022
Query: 734 ------------FPKALGDIIESLSGAIFVDSGCNK 757
PK GD+ ES+ GA+++D CN+
Sbjct: 2023 NRAGPYSSYLLDIPKWFGDVFESMFGAVWLD--CNQ 2056
>gi|388495198|gb|AFK35665.1| unknown [Medicago truncatula]
Length = 344
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 135/249 (54%), Gaps = 9/249 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E ++ Y+FR+ +LL EALTH SY PE Y+RLEF+GDAVL + I+ +L+ Y
Sbjct: 8 SVAAVEKIIGYTFRNKNLLEEALTHSSY--PE-SVSYERLEFIGDAVLGHAISNHLFLVY 64
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ L+ +RSA+V+ + A ++V + LH++I + L + I + E+ +
Sbjct: 65 TNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAI 124
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM--RLQPAR 783
+ K L D++ES++ A++VD + + ++ IR LLEP++T + + QP
Sbjct: 125 VLYGGAVKASKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVT 184
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
L E C K+ K + NG + T V+ +G LF +D K+ AK A+K ++
Sbjct: 185 MLYEICHKN--GKKVDIRHSRNGDKS-TASVYVDGELFAVASSD-QKDIAKLDAAKSAVQ 240
Query: 844 SLKASFPGT 852
L+ P T
Sbjct: 241 KLERVLPIT 249
>gi|297834980|ref|XP_002885372.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
gi|297331212|gb|EFH61631.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
Length = 391
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 135/244 (55%), Gaps = 12/244 (4%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE +LNY F++ SLL EA+TH S + P Y+RLEF+GD+ + I+ YLY YP+L
Sbjct: 63 LEKILNYKFKNKSLLKEAITHTS--CTDFP-SYERLEFVGDSAIGLAISNYLYLTYPSLE 119
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
P L+ +R+A+V+ + A ++ HGL++ + + L + + D+ + + + +
Sbjct: 120 PHQLSLLRAANVSTEKLARVTLNHGLYQFLRRNAPSLDEKVKEFSDAVGKED-DFSVAYG 178
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNE 787
PK L D+ ES++GA++VD + + ++ R LLEP++T + ++ QP L +
Sbjct: 179 GLVKAPKVLADLFESVAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238
Query: 788 YCQKHHFSMKKTVAPRINGKAAVTV-EVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
C KH KK + + +++ +++ + A+ +K+ A+ +A+KE L+ L
Sbjct: 239 LCHKH----KKRIDIKNWKDGNISIADIYLDDEFLASGRAE-NKDIARLIAAKEALRKLS 293
Query: 847 ASFP 850
FP
Sbjct: 294 EVFP 297
>gi|195996287|ref|XP_002108012.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
gi|190588788|gb|EDV28810.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
Length = 915
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 35/368 (9%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T+ + F+ E LE LGDS+LK+ + F N EG +S+ + +SN+
Sbjct: 469 SMLLQALTSLSADDFFNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNS 528
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTGRKKV 550
L + L + PF K W+ PG N+ + N+ ++ K+V
Sbjct: 529 HLSRTSKLKGLTLYQFNTPFKLKQWLPPGFTCIRNNANLVANNMLTDGSKQRDSESFKQV 588
Query: 551 KS-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR- 608
S K ++D VE L+G + G L IG+ +D NV E+ V E
Sbjct: 589 MSVKNISDTVEGLVGVYSLASGPVDAARLLPWIGLDID-PNVLIEKDKSVNFEIPTTDED 647
Query: 609 -HLESLL----NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
L S + +Y F + L A TH S YQRLE+LGDA+L+YL+ ++Y
Sbjct: 648 IQLSSCILRNTDYQFNNFYWLRIAFTHSSVA----SENYQRLEYLGDAILEYLLIEFVYC 703
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
+ P PG ++ +S N ++L ++ + HI +L I ++ +F+ + L+
Sbjct: 704 RKPYFGPGKISHFKSVMTRNQTFSLIAIAFQFYTHI-RCHSKLKLDIMDSIQNFKEILLD 762
Query: 724 -------------STFGWESETS-----FPKALGDIIESLSGAIFVDSGCNKEVVFESIR 765
+ ++ TS PK D+ E+ AI++D G V++ +
Sbjct: 763 NHQDDHQPDIGHFANLAYQLYTSNRYQKLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVY 822
Query: 766 PLLEPMIT 773
+++ ++
Sbjct: 823 KMVQRILA 830
>gi|302412697|ref|XP_003004181.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356757|gb|EEY19185.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 1240
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 193/453 (42%), Gaps = 94/453 (20%)
Query: 397 YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLE 456
Y +PSI H ++ L+A L + LL N + P S VL AI+TK E + E LE
Sbjct: 745 YFGALIPSISHIVEVRLVAEQLSSSLLRDL--NFSDP-SLVLTAISTKGSLEATNYERLE 801
Query: 457 TLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDP 516
LGDS LK + + ++SN+ LC+ D L F+ TE F
Sbjct: 802 FLGDSILKLCTTVNAAALHG-------------LVSNSRLCRAALDAGLDKFVLTENFTC 848
Query: 517 KMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG--ENV 574
+ W P +G E +G +++ +KT+ADVVEALIGA GG + +
Sbjct: 849 RTWR-PIYVNGMLETGARD---------SGPREISTKTLADVVEALIGAAYIDGGLAKAI 898
Query: 575 GL--IFLDRIGIKVDFVNVPY-ERQFQVQAERLVNVR----HLESLLNYSFRDPSLLVEA 627
G IFL + K+ +P + A V++ LE L++Y+F LL+E+
Sbjct: 899 GCISIFLRELEWKL----LPACQEILHSLAPPDVSLPPMLVPLEELIDYTFTKKILLIES 954
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
+TH S+ + C +RLEFLGDA+LD ++ +L+ LS + +++ASVN D
Sbjct: 955 ITHASFTAGHVNGCLERLEFLGDAILDDIVVSHLFPL--NLSHDRMHLLKTASVNGDLLG 1012
Query: 688 LSSV---------------------------------------KHGLHKHILHASQELYK 708
++ K L K + H+S E+ +
Sbjct: 1013 FLALESHAEEDEVIIDVNFSPSDTDLNPQNPAGMEQKLKRTRRKIPLWKFMRHSSIEVVQ 1072
Query: 709 WINITVDSFERLSLESTFGWESETSFP----------KALGDIIESLSGAIFVDSG---- 754
+ L + +S+P K L D++E++ GA++VDSG
Sbjct: 1073 QQTKAAGAHADLRGQIIHALGHGSSYPWSLLARLHPAKFLSDMVEAVLGAVWVDSGDMRA 1132
Query: 755 CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
C + I P+L + + L P EL E
Sbjct: 1133 CVRVTERLGILPVLSRLAKDDVHVLHPKSELGE 1165
>gi|242221926|ref|XP_002476701.1| predicted protein [Postia placenta Mad-698-R]
gi|220724029|gb|EED78105.1| predicted protein [Postia placenta Mad-698-R]
Length = 232
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
A+T QE + + LETLGD+ LKY S +LF Y HEG L+ +KD +SN L K
Sbjct: 1 ALTAPVAQELINYQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKC 60
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL----FNERKIYVTGRKKVKSKTV 555
L +I + F P+ W P SG ++ + N+ K T +++ +K +
Sbjct: 61 AISKGLYQWIIRDRFVPRKWR-PHYMSGPEDIGSRTEGANGNNDDKKKKTKTQELSTKVL 119
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKV-DFVNVP-YERQFQVQAERL----VNVRH 609
ADVVE+LIGA GG ++ + + G+ + + +P + + E L +
Sbjct: 120 ADVVESLIGAAYEHGGFDLAVNCISIFGLGLPSWQTIPQHIDNIMTKIEELDYPPPQLSL 179
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
+E++L Y F +LLV+ALTH SY Y+RLEFLGD+ LD ++T +LY
Sbjct: 180 VETMLGYEFTHKALLVQALTHASYHGDLTTMSYERLEFLGDSALDMVVTDWLY 232
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLE LGD VL Y+ ++ L+ YP G L + +V+N A ++ GL++ I+
Sbjct: 13 YQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKCAISKGLYQWIIR 72
Query: 702 ASQELYKW----------INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFV 751
KW I + + + +++ K L D++ESL GA +
Sbjct: 73 DRFVPRKWRPHYMSGPEDIGSRTEGANGNNDDKKKKTKTQELSTKVLADVVESLIGAAYE 132
Query: 752 DSGCNKEV 759
G + V
Sbjct: 133 HGGFDLAV 140
>gi|449550119|gb|EMD41084.1| hypothetical protein CERSUDRAFT_131598, partial [Ceriporiopsis
subvermispora B]
Length = 1587
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 34/272 (12%)
Query: 553 KTVADVVEALIGAFLSTGGE----------NVGLIFLDR---IGIKVDFVNVPYERQFQV 599
K ADVVEA+IGA +GG+ NVG+ +++ + F+ P +
Sbjct: 1226 KVCADVVEAIIGAAYLSGGQEVALRAAKVLNVGMTDIEQWSDFARRATFITDP-PASTRT 1284
Query: 600 QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 659
L +R +E ++ F P LL++ALTH S E+ Y RLEFLGDA+LD+L+
Sbjct: 1285 HRGFLEMLRAVEGIVGCRFEKPHLLLQALTHASIRGYEVLN-YDRLEFLGDAILDFLVIR 1343
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS-------QELYKWINI 712
Y+Y ++ LS G LT ++ A V+N A V GL ++ LHAS Q Y+ IN
Sbjct: 1344 YVYERHHNLSSGGLTLLKVAMVSNHVLAAFCVYCGLWQYALHASPDYAIAIQAYYERINN 1403
Query: 713 TVDSFERLSLES---TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV---FESI-R 765
+ ERL+ + +T PK L D++E++ GA++V G ++ + F+++ R
Sbjct: 1404 SRAQEERLAASEGRLPGQYWHDTEPPKILSDVVEAVLGALYVSDGFSEANIVNFFDNVFR 1463
Query: 766 PLLEPMITPETMRLQPAREL-----NEYCQKH 792
P + I +T+ P + L E CQ+H
Sbjct: 1464 PFYDRHIRLQTLSQHPKKTLFELMQAEGCQEH 1495
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
L PELC + P S ++ + +P IM R+ LL L L H +I +L
Sbjct: 917 LIPELCHRLTIPAS--SYRTTLLLPCIMRRIDDQLLIKELNAKLFQH-----SISEHHLL 969
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
A+ F E LE LGD++LKY +S F T +EG L + R ISN AL
Sbjct: 970 PALFPPSADAEFDYERLEFLGDAYLKYLSSTYCFVTMPRKNEGALHYARQRYISNKALRT 1029
Query: 499 LGCDHKLPGFIRTEPFDPKMW 519
LP +++++ F K+W
Sbjct: 1030 GSVRLGLPSYVQSKAFVAKLW 1050
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
Y+RLEFLGDA L YL + Y + P + G L R ++N SV+ GL ++
Sbjct: 983 YERLEFLGDAYLKYLSSTYCFVTMPRKNEGALHYARQRYISNKALRTGSVRLGLPSYVQS 1042
Query: 702 ASQELYKWINITVDSFE 718
+ W FE
Sbjct: 1043 KAFVAKLWTPSVAPEFE 1059
>gi|336270596|ref|XP_003350057.1| hypothetical protein SMAC_00946 [Sordaria macrospora k-hell]
gi|380095449|emb|CCC06922.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1586
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 185/440 (42%), Gaps = 77/440 (17%)
Query: 378 ELPPELCRIIMGPMSLSTFYS-----FTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVT 431
+L P+ C + + P+ +S + PSI+HR++S L+A LD C + +
Sbjct: 1011 DLEPQPCFLALEPLRISPIPADVAAMLLCFPSIIHRVESNLVA-------LDACKLLGLD 1063
Query: 432 IPTSKVLEAITTK--------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQN 477
+ LEA T + G + E LE LGDSFLK A + ++ +
Sbjct: 1064 LRPDLALEAFTKDSDNSNEHDVEQVNFQTGMGDNYERLEFLGDSFLKMATTMSIYTLIPD 1123
Query: 478 HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLF 537
E V++ +I N L + L +IR+ F+ + W G L
Sbjct: 1124 KGEFEYHVERMLLICNKNLLNNALEVGLEEYIRSMSFNRRQWYPEG----------LVLK 1173
Query: 538 NERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN---------VGLIFLD---RIGIK 585
+ R + K++ADV EALIGA TG E V + D R+
Sbjct: 1174 KGKNKDARTRHVLADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVRDKKHRMMNY 1233
Query: 586 VDFVNVPYERQFQV----QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIP 639
D+ V + +Q A+R + + E + Y F+ P LL A H +Y + +P
Sbjct: 1234 GDYYAVYQKPSWQTAPANSAQRDMADKFSERM-GYKFKHPRLLRAAFQHPTYPSLYERLP 1292
Query: 640 RCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI 699
YQRLEFLGDA+ D + YL+ K+P P LT+ + A V+N S G +K +
Sbjct: 1293 -SYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSYHLGFYKCV 1351
Query: 700 LHASQELYKWINITVDSFERLSLESTF------GWESE-------------TSFPKALGD 740
S + K I V E +LE+ G E + PK L D
Sbjct: 1352 ATMSPSILKDIAEYVTEIEE-ALEAAKQEAVNQGKAPEEYSRDYWVHITHVSRLPKCLSD 1410
Query: 741 IIESLSGAIFVDSGCNKEVV 760
++E+ GAIFVDS + VV
Sbjct: 1411 VVEAYIGAIFVDSEYDYSVV 1430
>gi|449526603|ref|XP_004170303.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 2-like
[Cucumis sativus]
Length = 338
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 132/243 (54%), Gaps = 13/243 (5%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE +L+Y+F + SLL EALTH SY Y+RLEF+GD+ + IT Y + P L
Sbjct: 8 LERILSYNFNNKSLLEEALTHXSY---SASASYERLEFVGDSAIGLAITNYFFLASPHLH 64
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE-STFGW 728
G L+ +R+A+V+ + A +V HGL+ ++ S + + VDS ++LE S+ +
Sbjct: 65 QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDS---VALEGSSVHY 121
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELN 786
PK L DI+ES++GA++VD + + ++ IR LLEP+ T E +++ QP L
Sbjct: 122 GRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 181
Query: 787 EYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ Q++ + + NG ++ VH +G F + + KE A+ A++E L L
Sbjct: 182 QVGQRN--GKQVDIKHWKNGSNSIA-SVHVDGK-FVASGSSMQKEIARLNAAREALIKLS 237
Query: 847 ASF 849
S
Sbjct: 238 DSM 240
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EA+T E LE +GDS + A + F + H+G LS+ + +S L +
Sbjct: 24 EALTHXSYSASASYERLEFVGDSAIGLAITNYFFLASPHLHQGHLSLLRAANVSTEKLAR 83
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
+ H L ++R + P M + + S L S+ GR K +AD+
Sbjct: 84 VAVTHGLYNYVRRDS--PAMDVKVKEFVDSVALEGSSVH-------YGRLMKAPKVLADI 134
Query: 559 VEALIGA 565
VE++ GA
Sbjct: 135 VESVAGA 141
>gi|391348645|ref|XP_003748555.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1461
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 154/359 (42%), Gaps = 73/359 (20%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+++A+TT+ C+E F LE LE LGDSFL+ ++ + Y + L+V + ++N+ L
Sbjct: 1089 LMKALTTRGCEEIFDLERLELLGDSFLQIVSTFAVMDWYPDKSISELNVLRQYEVNNSHL 1148
Query: 497 CKLGCDHKL----------------PGFIRTEPFDPKM------------WMIPG----- 523
+ L P RT PF+ K+ W
Sbjct: 1149 LYRAHEKGLTQVLEAQPFRASYNFLPFGHRTAPFEQKLLQREFLCCLVKHWGFEAVSSVP 1208
Query: 524 ------------------DNSGSYELN---DHSLFNER------KIYVTGRKKVKSKTVA 556
SG ++N D +++ +I V K+K
Sbjct: 1209 RLKDLRFCKNIQEALNHFAESGEEKINAYVDEKIYDSEDLPKRHEIPVRSFHDFKAKIGG 1268
Query: 557 DVVEALIGAFLSTGGENVGLIFLDRIGIK---------VDFVNVPYERQFQVQAERLVNV 607
DVVEA+ G +L G L F IG +D + + +V E++
Sbjct: 1269 DVVEAMAGVYLEKCGPVGALRFFKWIGKDFGDTETNNFLDAFKLDFSAAQKVPPEQMRQY 1328
Query: 608 RHL----ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
HL E + Y F+ L ++A+TH S + +L F+G+AV+DYL+T+Y+Y
Sbjct: 1329 SHLIDKVERQVGYKFKSRGLALQAITHHSCREHLLTDDMDKLAFVGEAVIDYLLTLYIYG 1388
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+L+PG LTD+RSA +N A + V+ LH +LH S +L+ I + +FE + L
Sbjct: 1389 LSTSLNPGQLTDLRSALINKQVTAYAVVRAELHTVLLHTSNKLFSAIKKYLSNFEDIGL 1447
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 101/265 (38%), Gaps = 60/265 (22%)
Query: 16 GRARMQNSDYL---------LMLKRYFKPTPKFDINK--EMGICTLYLPNNCPIQTVIAQ 64
GRAR+ + M +Y P FD+ + + +CTL +P CP++ I+
Sbjct: 541 GRARITAKSAISIIYGYCQRFMRLKYPNLFPFFDMEETPDGFVCTLSMPIVCPVKEKISN 600
Query: 65 G-----NIKTLKQTACLEACKKLHQIGALTDNLLPDVVVEEHDAQKHGNEPYDAEHPIYF 119
+ K LE CK+LHQ G L DNLLP + + K P D
Sbjct: 601 RARPFPSKDKAKSYVALEMCKRLHQCGELADNLLPRRMYT--NLYKLHTRPEDVNPKEDL 658
Query: 120 PPE-LVNQCPQDTKI-------------------------TYHCYLIEL--------KQN 145
E LV +C K TYH Y+I +QN
Sbjct: 659 KKEMLVTRCKAGEKKRYVLPRKRASILELKEEGVDCDPLDTYHLYVIRTEVVSWTAKEQN 718
Query: 146 FNYDIPAHDIV-----LAVRTELES-EIKKV-NFDLEVDRGRLTVNLKHLGKIQLTPDKV 198
+ D P D V LA+ +S E++ V F + G V+ ++ G +
Sbjct: 719 WRGD-PVFDPVKYPTWLAIVLRSKSNEMQSVPKFPIFTRSGEECVSFEYAGAQIFDDELK 777
Query: 199 LLCRRFQIALFRVIMDHNLDKLNEI 223
LC RF +F +++D + LN +
Sbjct: 778 SLCARFNRYVFSIVLDVKDNLLNPV 802
>gi|340975794|gb|EGS22909.1| hypothetical protein CTHT_0013870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1660
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 181/447 (40%), Gaps = 87/447 (19%)
Query: 383 LCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT 442
L ++M + + +P+++ L LLA +L L V+ A+
Sbjct: 1094 LREVVMDAVPAKYAEAALMIPALLVVLGDHLLARDLLTERLREKTGMGGDDLGNVVRALW 1153
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
Q E++E LGD+ LK+ + Y + EG LS KDRI+SN +
Sbjct: 1154 ASGAQRPGDYENMEFLGDALLKFLTTVNCEAKYLTYPEGFLSPIKDRIVSNMRFFRAAVG 1213
Query: 503 HKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEAL 562
L +I K W P +S R VT +++ +KTVADVVEAL
Sbjct: 1214 FGLDRYIIDAKMVQKRWRPPTISS----------ILGRPPSVTAPRQLSTKTVADVVEAL 1263
Query: 563 IGAFLSTGGENVGL----IFLDRIGIKVDFVNVPYERQF---QVQAERLV--NVRHL-ES 612
+GA +GG + L +FL + +D++ V R A+ + +R + E
Sbjct: 1264 VGAAYLSGGTDRALTCVPLFLP--DVPIDWLPVGRCRDILFNHAAADDPLPKTMRRIEEQ 1321
Query: 613 LLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITVYLYNKYP----- 666
LL Y F+ SLLVEALTH S P + RLE LGDA+LD+L+ LY Y
Sbjct: 1322 LLGYEFKKKSLLVEALTHSSCPAGPGVRGSLDRLELLGDALLDFLVATKLYELYKCNVDG 1381
Query: 667 ---TLSPGDLTDMRSASVNNDCYAL----------------------------SSVKHGL 695
+ P L M+SA VN D A+ +++ G
Sbjct: 1382 QQQMVVPYILHIMKSALVNQDIMAVLILEEWTILQEELDIIAPPSPSSSQGSETAISEGN 1441
Query: 696 HKH------------------ILHASQELYKWINITVDSFERLSLE--------STFGWE 729
+H + H + +L +++N T + + E + W
Sbjct: 1442 GEHSGGVTLRTRHVRVPLTAFLRHNTIQLSRFMNDTTRRYAAMRHEVQHALTHGDRYPWR 1501
Query: 730 --SETSFPKALGDIIESLSGAIFVDSG 754
S+ PK D+ E++ A++VDSG
Sbjct: 1502 LISQLRAPKVFSDVFEAVLAAVWVDSG 1528
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P Y+ +EFLGDA+L +L TV KY T G L+ ++ V+N + ++V GL ++
Sbjct: 1160 PGDYENMEFLGDALLKFLTTVNCEAKYLTYPEGFLSPIKDRIVSNMRFFRAAVGFGLDRY 1219
Query: 699 ILHASQELYKWINITVDSFERLSLESTFGWESETSFP-----KALGDIIESLSGAIFVDS 753
I+ A +W T+ S G + P K + D++E+L GA ++
Sbjct: 1220 IIDAKMVQKRWRPPTISSI--------LGRPPSVTAPRQLSTKTVADVVEALVGAAYLSG 1271
Query: 754 GCNK 757
G ++
Sbjct: 1272 GTDR 1275
>gi|171689324|ref|XP_001909602.1| hypothetical protein [Podospora anserina S mat+]
gi|170944624|emb|CAP70735.1| unnamed protein product [Podospora anserina S mat+]
Length = 1406
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 131/274 (47%), Gaps = 23/274 (8%)
Query: 422 LLDHCMQNVTIPT-SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHE 480
LLD +Q I V+ AIT + E +E LGDS LK+ T +
Sbjct: 898 LLDGSLQTTGITGLDLVVTAITASGARRSIDYERIEFLGDSILKFCT------TINCSAQ 951
Query: 481 GLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNER 540
LS KD+I+SN LCK D L +I + W P E D+ +
Sbjct: 952 CFLSASKDKIVSNYRLCKAAIDFGLARYIINTAYTTDKWR-PVFVEDYLERTDNPSSDGP 1010
Query: 541 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQF--- 597
K +++ +KT+ADVVEALIGA +GG N L + + + ++ + RQ
Sbjct: 1011 KT-----REMSTKTLADVVEALIGASHISGGINKALACISLFLPEAKWQSIDHGRQVLYD 1065
Query: 598 -QVQAERLV-NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 655
E L N+ LE L+ Y+F+ SLL+EA+TH S+ + + RLEFLGDA+LDY
Sbjct: 1066 EAPDDEPLPPNMHLLEKLIGYTFKKKSLLIEAMTHPSFNVQDTRASLDRLEFLGDAILDY 1125
Query: 656 LITVYLYNKYPTLSPGDLTD-----MRSASVNND 684
L+ L++ L+ L + +R+A VN D
Sbjct: 1126 LVVESLFSLREPLTGLPLENSKLHLLRTALVNAD 1159
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
Y+R+EFLGD++L + T+ + L+ + V+N +++ GL ++I++
Sbjct: 929 YERIEFLGDSILKFCTTINCSAQC------FLSASKDKIVSNYRLCKAAIDFGLARYIIN 982
Query: 702 ASQELYKWINITV-DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
+ KW + V D ER S+ G ++ K L D++E+L GA + G NK
Sbjct: 983 TAYTTDKWRPVFVEDYLERTDNPSSDGPKTREMSTKTLADVVEALIGASHISGGINK 1039
>gi|367035818|ref|XP_003667191.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
gi|347014464|gb|AEO61946.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
Length = 1475
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 147/303 (48%), Gaps = 22/303 (7%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEG-FHLESLETLG 459
F+P+I L+ L+A +L LD ++ I ++ A + G E +E LG
Sbjct: 969 FIPAITRALEVHLVAKDL----LDTRLEPTGITDLSLVVAAISASAARGPTDYERVEFLG 1024
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
D+ LK+ + Y H EG LS KD+I+SN+ L D L +I + F W
Sbjct: 1025 DAILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLFHAAVDFGLDRYIIHKTFTMHKW 1084
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
+Y + D E T +++ +KT+ADVVEALIGA +GG L +
Sbjct: 1085 ------RPAY-VED---LLENPPSETETRRLSTKTLADVVEALIGASYISGGTPKALACM 1134
Query: 580 DRIGIKVDFVNVPYERQF----QVQAERL-VNVRHLESLLNYSFRDPSLLVEALTHGSYM 634
+ ++ ++ + R+ E L +R LESLL Y+F SLLVEA+TH S
Sbjct: 1135 SLFLPEFEWHSIEHCREVLYNQAPDDEPLPATMRSLESLLGYTFTKRSLLVEAMTHPSCN 1194
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYPT-LSPGDLTDMRSASVNNDCYALSSVK 692
P I RLEFLGDA+LDY++ L++ PT L L +R+ VN D A +++
Sbjct: 1195 GPNIRASLDRLEFLGDAILDYIVVKALFDMSTPTPLENSTLHLLRTTLVNADILAFLALE 1254
Query: 693 HGL 695
+
Sbjct: 1255 WAI 1257
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P Y+R+EFLGDA+L + V YP G L+ ++ V+N ++V GL ++
Sbjct: 1014 PTDYERVEFLGDAILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLFHAAVDFGLDRY 1073
Query: 699 ILHASQELYKWINITV-DSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
I+H + ++KW V D E E+ E+ K L D++E+L GA ++ G K
Sbjct: 1074 IIHKTFTMHKWRPAYVEDLLENPPSET----ETRRLSTKTLADVVEALIGASYISGGTPK 1129
Query: 758 EVVFESI 764
+ S+
Sbjct: 1130 ALACMSL 1136
>gi|449459586|ref|XP_004147527.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 353
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +L+Y F++ LL EALTH SY+ Y RLEF+GD+ + I+ Y + YP L+
Sbjct: 24 IERILSYKFKNKKLLEEALTHSSYLNSP---SYDRLEFIGDSAIGLAISTYFFPLYPDLN 80
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE-STFGW 728
G LT +R+A+V+ + A +V H L+ ++ + +L + D+ ++LE ++ +
Sbjct: 81 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADA---VALEDNSIPY 137
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELN 786
PK L DI+ES++GAI+VD + + ++ I+ L+P+ TPE ++ QP L
Sbjct: 138 GGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLF 197
Query: 787 EYCQK 791
E CQK
Sbjct: 198 EDCQK 202
>gi|15242329|ref|NP_199328.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
gi|75171238|sp|Q9FKF0.1|RTL3_ARATH RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3; AltName: Full=Ribonuclease
three-like protein 3
gi|9759600|dbj|BAB11388.1| unnamed protein product [Arabidopsis thaliana]
gi|332007827|gb|AED95210.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
Length = 957
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 9/176 (5%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E +LNYSF + +LL EA+T S + + RLEF GD++L+ T Y+ + Y
Sbjct: 3 SVEAVEKILNYSFVNKTLLKEAITQKSPL-------FDRLEFFGDSILEVAFTNYICHTY 55
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L +L D+R+A+V+N+ +A +V H LH +L + L+K + ++ +
Sbjct: 56 PNLKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVP 115
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQP 781
+G PK L D +ES++ +F+D + + ++E R LLEP+ TP+ + LQP
Sbjct: 116 YG--GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQP 169
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 32/256 (12%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E +LNYSF + +LL E LTH + L +Q L F+G++ L T +LY Y
Sbjct: 414 SVEAVEKILNYSFVNKTLLKELLTHNNSPL------FQGLMFVGESALSLAFTKHLYLTY 467
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L P DL+ +R A+ +D YA +VK G+++ + + + K +T D E +
Sbjct: 468 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGS---VPKPEKMTTDFIELM----- 519
Query: 726 FGWESE----TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
G E + PK L +++ ++GA+++D N + + E R LLEP+ T + +R+
Sbjct: 520 -GKEDDPYRVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQL 578
Query: 780 -QPARELNEYCQKH----HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
QP L KH F K R N +V+ + +F + +TAK
Sbjct: 579 KQPFLMLFRLADKHGKQIDFRYSKDGGSRKN-----IAQVYMDD-MFIASGCAKRIDTAK 632
Query: 835 KVASKEVLKSLKASFP 850
+A++E ++ L P
Sbjct: 633 LLAAEEAIQKLSECMP 648
>gi|121807817|sp|Q2VF19.1|DCL1_CRYPA RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL-1; Includes: RecName:
Full=ATP-dependent helicase DCL-1
gi|77632774|gb|ABB00356.1| dicer-like protein 1 [Cryphonectria parasitica]
Length = 1548
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 177/442 (40%), Gaps = 82/442 (18%)
Query: 383 LCRIIMGPMSLS-----TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSK 436
C ++ PM +S +PSI+HR++ L+A LD C + + I
Sbjct: 994 FCYFVLEPMRISPLPVDVVAMAYLLPSIIHRIEQNLIA-------LDACRLLQLDIHPDL 1046
Query: 437 VLEAITTKKCQEG---------------------FHLESLETLGDSFLKYAASQQLFKTY 475
LEA+T +G + E LE LGDSFLK A + +F
Sbjct: 1047 ALEALTKDSDNQGEDERMDSIQAFEPVNFQPGMGANYERLELLGDSFLKMATTIAVFTLI 1106
Query: 476 QNHHEGLLSVKKDRIISNAALCKLGC--DHKLPGFIRTEPFDPKMWM-IPGDNSGSYELN 532
N E ++ +I N L + D KL +IR++ F+ W + G L
Sbjct: 1107 PNKDEFDYHCERMVMICNQNLFGVAKSDDLKLHEYIRSKSFERGTWYPVLKLEFGKTHLK 1166
Query: 533 DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN-- 590
+E ++ K++ADV EALIGA T ++ R ++ VN
Sbjct: 1167 TLKQMDEHRL--------ADKSIADVCEALIGAAYMTTRKHDDYDLAVRAVTRL--VNHK 1216
Query: 591 ---------------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS--Y 633
+P + A L + + Y F+ P +L A H S Y
Sbjct: 1217 QHPMTKWDDYHAAYVMPGWQTMPANAAELDMAQKIHEATGYQFKHPRVLRSAFRHPSRPY 1276
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
+ ++P YQRLEFLGDA+ D YL++ P P LT+ + A V+N +V
Sbjct: 1277 VFDKVPH-YQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSL 1335
Query: 694 GLHKHILH----ASQELYKWIN-ITVDSFERLSLESTFG----------WESETSFPKAL 738
G HK ILH ++++++ IT G W PK +
Sbjct: 1336 GFHKFILHHHASIGSQIHEYVTEITEARRAAEDAAEAAGKPRSAYSRDYWVEAPQPPKCI 1395
Query: 739 GDIIESLSGAIFVDSGCNKEVV 760
D++E+ GAIFVDS + VV
Sbjct: 1396 PDVLEAYVGAIFVDSKYDYSVV 1417
>gi|161579129|gb|ABX72052.1| Dicer-1 protein [Tribolium castaneum]
Length = 157
Score = 105 bits (262), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 16/154 (10%)
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYERQFQVQAERLVNV- 607
ALIGA+L G L+F+ +GI+V + P E L +
Sbjct: 1 ALIGAYLIECGPRGALLFMAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLL 60
Query: 608 ---RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
E + Y FRD S L++ALTH S+ + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 61 DGYDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYED 120
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
SPG LTD+RSA VNN +A +V++G H++
Sbjct: 121 TRMHSPGALTDLRSALVNNTIFASLAVRNGFHRY 154
>gi|449526605|ref|XP_004170304.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 339
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 106/185 (57%), Gaps = 9/185 (4%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +L+Y F++ LL EALTH SY+ Y RLEF+GD+ + I+ Y + YP L+
Sbjct: 10 IERILSYKFKNKKLLEEALTHSSYLNSP---SYDRLEFIGDSAIGLAISTYFFPLYPDLN 66
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE-STFGW 728
G LT +R+A+V+ + A +V H L+ ++ + +L + D+ ++LE ++ +
Sbjct: 67 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADA---VALEDNSIPY 123
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELN 786
PK L DI+ES++GAI+VD + + ++ I+ L+P+ TPE + QP L
Sbjct: 124 GGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLF 183
Query: 787 EYCQK 791
E CQK
Sbjct: 184 EDCQK 188
>gi|307133775|ref|NP_001182502.1| endoribonuclease Dicer isoform 2 [Homo sapiens]
gi|300517087|gb|ADK25182.1| t-Dicer [Homo sapiens]
Length = 1829
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--F 726
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + LE
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 727 GWESETSF 734
G +SE SF
Sbjct: 1784 GMDSEKSF 1791
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|452003006|gb|EMD95463.1| hypothetical protein COCHEDRAFT_1026333 [Cochliobolus heterostrophus
C5]
Length = 1592
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 205/502 (40%), Gaps = 98/502 (19%)
Query: 348 LLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLST-FYSFTFV-PSI 405
+L RI +N L+ +++ + S + + PE I +L+T F +V P+I
Sbjct: 986 VLQAERIPLRRNQLAHIEDKEKGDFSNLKIYICPEPFHI----SNLATPFVVMCYVLPAI 1041
Query: 406 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT--TKKCQE--------------- 448
+HR +S L+A+ ++L + + + LEA+T ++ +E
Sbjct: 1042 IHRFESYLIALEACSVL------ELKVNPALALEALTKDSENSEEHDEEKINFKSGMGPN 1095
Query: 449 -----------GFHLE---SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
GF L SLE LGD FLK A S +F + +E V++ ++ N
Sbjct: 1096 YERYGYELRMNGFKLTLGLSLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNK 1155
Query: 495 ALCKLGC-------------DHKLPGFIRTEPFDPKMWMIPG----DNSGSYELNDHSLF 537
L + D +L +IRTE F + W G G+ + D
Sbjct: 1156 NLMETAVGNKKVVSPEGTEKDLQLYKYIRTESFSRRTWYPEGLRLLKGKGANKSQDD--- 1212
Query: 538 NERKIYVTGRKKVKSKTVADVVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP-- 592
++ + K++ADV EA IGA L TG + + + F N P
Sbjct: 1213 -----WLKLTHNLGDKSIADVCEAFIGATLQEHYTGDRWRPNDWDEAVKAVKLFANSPDH 1267
Query: 593 -------YERQFQ--------VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--ML 635
Y +Q A L R +E Y F+ P LL A H SY M
Sbjct: 1268 TMSKWSDYYEAYQKPKYQTAEASAAMLDMARKIEMKHPYHFKYPRLLRSAFAHPSYPYMY 1327
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
IP YQRLEF GDA+LD +LY KYP P LT+ ++ V+N VK G
Sbjct: 1328 ENIPN-YQRLEFAGDALLDMAFITHLYFKYPDKDPHWLTEHKTPMVSNKFLGAVCVKLGW 1386
Query: 696 HKHILHASQELYKWIN---ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVD 752
H +I + L I + + ER + + W + + PK L D+IE+ +IFVD
Sbjct: 1387 HVYIKQNTATLTNQIRDYVLEAEEAEREAGGAVDYWVTISEPPKCLADVIEAYVASIFVD 1446
Query: 753 SGCNKEVVFESIRPLLEPMITP 774
+ E F ++ E + P
Sbjct: 1447 A----EFDFGVVQTFFEMHLKP 1464
>gi|167046028|gb|ABZ10545.1| dicer-like protein D [Trichoplax adhaerens]
Length = 351
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 158/353 (44%), Gaps = 37/353 (10%)
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F+ E LE LGDS+LK+ + F N EG +S+ + +SN+ L + L +
Sbjct: 6 FNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTLYQ 65
Query: 510 RTEPFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTGRKKVKS-KTVADVVEALIG 564
PF K W+ PG N+ + N+ ++ K+V S K ++D VE L+G
Sbjct: 66 FNTPFKLKQWLPPGFTCIRNNANLVANNMLTDGSKQRDSESFKQVMSVKNISDTVEGLVG 125
Query: 565 AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR--HLESLL----NYSF 618
+ G L IG+ +D NV E+ V E L S + +Y F
Sbjct: 126 VYSLASGPVDAARLLPWIGLDID-PNVLIEKDKSVNFEIPTTDEDIQLSSCILRNTDYQF 184
Query: 619 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
+ L A TH S YQRLE+LGDA+L+YL+ ++Y + P PG ++ +S
Sbjct: 185 NNFYWLRIAFTHSSVA----SENYQRLEYLGDAILEYLLIEFVYCRKPYFGPGKISHFKS 240
Query: 679 ASVNNDCYALSSVKHGLHKHI-LHASQELYKWINITVDSFERLSLE-------------S 724
N ++L ++ + HI H+ +L I ++ +F+ + L+ +
Sbjct: 241 VMTRNQTFSLIAIAFQFYTHIRCHSKLKLD--IMDSIQNFKEILLDNHQDDHQPDIGHFA 298
Query: 725 TFGWESETS-----FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
++ TS PK D+ E+ AI++D G V++ + +++ ++
Sbjct: 299 NLAYQLYTSNRYQKLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVYKMVQRIL 351
>gi|83774779|dbj|BAE64902.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1256
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 178/428 (41%), Gaps = 58/428 (13%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
PSI+HR+ L+A L+ + + + A++ S+ +GD
Sbjct: 814 LAPSIIHRIGVYLIAEKLRKQIFSNPQAARFERMDLLCIALSPTDDMHRHEFRSMAFIGD 873
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
+ +K+ ++QLF + HEGLL+ KD I+S+ L C ++ T F+ K W
Sbjct: 874 AIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGKRWR 933
Query: 521 IPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGEN-----V 574
P S + K T R+ V + TVAD+V+AL G AFL G +
Sbjct: 934 -PSFVSTTLS----------KSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQAFICAA 982
Query: 575 GLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM 634
+I + + + Y + ++ + LE+LL Y+F D SL +E++TH S +
Sbjct: 983 AMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESMTHPSCV 1042
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN----------- 683
Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 1043 GLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLCLTFH 1102
Query: 684 ----------DCYALSSV-----KHGLHKHILHASQELYKWINITVDSF--------ERL 720
D + SV + L+ + S L ++ V+ L
Sbjct: 1103 WEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLHVIKRDL 1162
Query: 721 SLESTFGWESETSFP--KALGDIIESLSGAIFVDSGCN---KEVVFE--SIRPLLEPMIT 773
+ W + F K DI++S+ GAI++DS + E + E I PLLE I+
Sbjct: 1163 WENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPLLEHFIS 1222
Query: 774 PETMRLQP 781
+ + P
Sbjct: 1223 HDVVTDHP 1230
>gi|238497846|ref|XP_002380158.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
gi|220693432|gb|EED49777.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
Length = 1339
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 171/414 (41%), Gaps = 98/414 (23%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEA 440
E C + P+S + F F+P I+ RL+S L+A L +L D ++ V+ A
Sbjct: 881 ESCTVDKLPVSTAIFG--LFIPHIVDRLESTLIANRLCATILCDVGFADI----QHVITA 934
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I Q + + E LGDS LKY S QLF N EG L+ + I+ N L +
Sbjct: 935 IMAPSAQGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAA 994
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L FI T+ P+ W+ P L + R ++++ +K +ADV+E
Sbjct: 995 LDAGLDSFIITKALTPRRWIAP-------------LISTRVGAAPVKRQMSAKVLADVIE 1041
Query: 561 ALIGAFLSTGGENVGLI----FLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNY 616
ALIGA GG + I FL VN + L+
Sbjct: 1042 ALIGAAYLDGGHSKAQICTHCFLPE-----------------------VNRQPLDI---- 1074
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
PSL+ + HG I EFLGDA+LD +I ++ +SPGD+T +
Sbjct: 1075 ----PSLITQT-EHGRTARQIID------EFLGDAILDMVIVPIIFQYSNKISPGDMTLI 1123
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKWI----------- 710
+ A VN + ++ + + + EL++++
Sbjct: 1124 KHAVVNANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLDLQTSR 1183
Query: 711 NITVDSFERLS---LES-----TFGWESETSF--PKALGDIIESLSGAIFVDSG 754
+ +D RL L S ++ W+S + K DI+ES+ GAI+VDSG
Sbjct: 1184 DAALDRHRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSG 1237
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQR EFLGD++L Y+++ L+ + G LT+ R+ V N +++ GL I+
Sbjct: 946 YQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLDSFIIT 1005
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
+ +WI + + R+ K L D+IE+L GA ++D G +K
Sbjct: 1006 KALTPRRWIAPLIST--RVGAAPV----KRQMSAKVLADVIEALIGAAYLDGGHSK 1055
>gi|325185579|emb|CCA20062.1| Dicerlike 1 (DCL1) putative [Albugo laibachii Nc14]
Length = 1609
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 163/359 (45%), Gaps = 74/359 (20%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQN-HHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRT 511
E E LGD+FLK S +++ ++ EG LS+ + II N LC+ +L +I
Sbjct: 1214 ERCEVLGDTFLKLETSWYMYQMRRDIPDEGTLSMLRRDIIRNDRLCQFSLLKELHHYI-- 1271
Query: 512 EPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRK----KVKSKTVADVVEALIGAFL 567
+ P EL H F+ K G+ SK +ADV+EA+ GA++
Sbjct: 1272 --------VYPA------ELEQHP-FSCWKPSCMGKTPQSINAPSKWIADVLEAICGAYI 1316
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQ-----------------------VQAERL 604
GE FL+ +GI V + + ++F + E L
Sbjct: 1317 IGHGEKGARYFLNWVGIHVLDDSFEFSKRFYPDCYPKTLFPEAFKHVGKWKFSILHHETL 1376
Query: 605 VN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEI----------PRCYQRLEFLGDAVL 653
V +R LE L Y FR+ LL+EA+TH S EI Y+RLE+LGDA++
Sbjct: 1377 VKKMRLLEQRLCYRFRNKLLLLEAITHPSVRRLEIVMDNEKRVSWQGNYERLEYLGDALI 1436
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVK-HGLHKHI----LHASQELYK 708
+YL Y + + T PG L++ ++A+V+ND +++ G+ + I + +E+
Sbjct: 1437 EYLTVSYAFLAHDTWLPGSLSNWKAATVSNDALGKTAIACFGVDEAICLGHVQFDREIMN 1496
Query: 709 WI---------NITVDSFE----RLSLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
I + VD+ + R S + + + PK L D++E+L A+F+DSG
Sbjct: 1497 KIKTIPRKYAVDYNVDTIQPGHSRNSTTKSNCTTNLLALPKILADVMEALVAAVFLDSG 1555
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAI--TTKK 445
+G S + T V + RL L +N LL ++ +T P+ + LE + K+
Sbjct: 1363 VGKWKFSILHHETLVKKM--RLLEQRLCYRFRNKLL--LLEAITHPSVRRLEIVMDNEKR 1418
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK-----LG 500
+ E LE LGD+ ++Y F + G LS K +SN AL K G
Sbjct: 1419 VSWQGNYERLEYLGDALIEYLTVSYAFLAHDTWLPGSLSNWKAATVSNDALGKTAIACFG 1478
Query: 501 CDHKLP-GFIRTEPFDP----KMWMIPGDNSGSYELN----DHSLFNERKIYVTGRKKVK 551
D + G ++ FD K+ IP + Y ++ HS + K T
Sbjct: 1479 VDEAICLGHVQ---FDREIMNKIKTIPRKYAVDYNVDTIQPGHSRNSTTKSNCTTNLLAL 1535
Query: 552 SKTVADVVEALIGAFLSTGGENVGLI---FLDRI 582
K +ADV+EAL+ A G+++G+I FL R+
Sbjct: 1536 PKILADVMEALVAAVFLDSGKDLGIIRDVFLGRL 1569
>gi|397615349|gb|EJK63376.1| hypothetical protein THAOC_15968 [Thalassiosira oceanica]
Length = 1692
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 198/465 (42%), Gaps = 54/465 (11%)
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIF---HAQNYLSKCRQEKQREPSKISFELPPELC 384
++ ++ E+YG+ L +R++ H+ + L E+ + + ELP E+C
Sbjct: 1148 SFLHYFSEKYGVTTLCPTSKLFVAKRVWDMPHSHSVLGPGAAEEDVAHAA-NLELPAEVC 1206
Query: 385 RIIMGPMS-LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI---------PT 434
+ PM+ S T +P ++ ++ L A + HC +N + P
Sbjct: 1207 Q--ESPMADPSIVLQSTLLPQFLYLVERRLTA----EAFIRHCQENYEVLGECLSRAGPD 1260
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNH--HEGLLSVKKDRIIS 492
S V+E +TTK C+ E LE LGD+ LK + L + HEG L + + + S
Sbjct: 1261 S-VMEVLTTKTCRMPQDYERLEWLGDAVLKLVQTDSLLQYSDTSYLHEGYLHMLRSVMGS 1319
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS 552
N L ++ + FI + P + + W +L H + + + T KV
Sbjct: 1320 NERLERVAEECGFNHFILSCPLNREEW-----RPSRLQLRKHDDSSTKALPPTPSGKV-- 1372
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP--YERQFQVQAERLVNVRHL 610
ADVVEA++G G + IG+ FVN R F E + L
Sbjct: 1373 --CADVVEAILGLIFVQFGFAKSVEVSLEIGLT--FVNADKLSRRDFWSALED--DGELL 1426
Query: 611 ESLLNYS---FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
N++ DP LL EA+TH S + + R YQ LE+ GDA + +L++K
Sbjct: 1427 AFATNFTGQPISDPRLLHEAVTHPS-CVSKPCRSYQTLEWAGDAAVCLAARNWLFHKKEK 1485
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG 727
LS L + S +N A +G+ + I H EL FE + G
Sbjct: 1486 LSVPTLVVLESTLTSNQSLAYIGHLNGVQRIIDHRMSEL-------PGRFESYKFQLRRG 1538
Query: 728 -WESETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLE 769
W ++ PK + D++ESL GA+ VD G +E +RPLL+
Sbjct: 1539 LWATDP--PKVIPDVVESLIGAVHVDQGVEAGQEAAAYVLRPLLD 1581
>gi|317156821|ref|XP_001826035.2| hypothetical protein AOR_1_660054 [Aspergillus oryzae RIB40]
Length = 939
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 178/428 (41%), Gaps = 58/428 (13%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
PSI+HR+ L+A L+ + + + A++ S+ +GD
Sbjct: 497 LAPSIIHRIGVYLIAEKLRKQIFSNPQAARFERMDLLCIALSPTDDMHRHEFRSMAFIGD 556
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
+ +K+ ++QLF + HEGLL+ KD I+S+ L C ++ T F+ K W
Sbjct: 557 AIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGKRWR 616
Query: 521 IPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGEN-----V 574
P S + K T R+ V + TVAD+V+AL G AFL G +
Sbjct: 617 -PSFVSTTLS----------KSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQAFICAA 665
Query: 575 GLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM 634
+I + + + Y + ++ + LE+LL Y+F D SL +E++TH S +
Sbjct: 666 AMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESMTHPSCV 725
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN----------- 683
Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 726 GLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLCLTFH 785
Query: 684 ----------DCYALSSV-----KHGLHKHILHASQELYKWINITVDSF--------ERL 720
D + SV + L+ + S L ++ V+ L
Sbjct: 786 WEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLHVIKRDL 845
Query: 721 SLESTFGWESETSFP--KALGDIIESLSGAIFVDSGCN---KEVVFE--SIRPLLEPMIT 773
+ W + F K DI++S+ GAI++DS + E + E I PLLE I+
Sbjct: 846 WENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPLLEHFIS 905
Query: 774 PETMRLQP 781
+ + P
Sbjct: 906 HDVVTDHP 913
>gi|391873779|gb|EIT82787.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1089
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 178/428 (41%), Gaps = 58/428 (13%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
PSI+HR+ L+A L+ + + + A++ S+ +GD
Sbjct: 647 LAPSIIHRIGVYLIAEKLRKQIFSNPQAARFERMDLLCIALSPTDDMHRHEFRSMAFIGD 706
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
+ +K+ ++QLF + HEGLL+ KD I+S+ L C ++ T F+ K W
Sbjct: 707 AIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGKRWR 766
Query: 521 IPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGEN-----V 574
P S + K T R+ V + TVAD+V+AL G AFL G +
Sbjct: 767 -PSFVSTTLS----------KSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQAFICAA 815
Query: 575 GLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM 634
+I + + + Y + ++ + LE+LL Y+F D SL +E++TH S +
Sbjct: 816 AMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESMTHPSCV 875
Query: 635 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN----------- 683
Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 876 GLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLCLTFH 935
Query: 684 ----------DCYALSSV-----KHGLHKHILHASQELYKWINITVDSF--------ERL 720
D + SV + L+ + S L ++ V+ L
Sbjct: 936 WEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLHVIKRDL 995
Query: 721 SLESTFGWESETSFP--KALGDIIESLSGAIFVDSGCN---KEVVFE--SIRPLLEPMIT 773
+ W + F K DI++S+ GAI++DS + E + E I PLLE I+
Sbjct: 996 WENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPLLEHFIS 1055
Query: 774 PETMRLQP 781
+ + P
Sbjct: 1056 HDVVTDHP 1063
>gi|297836192|ref|XP_002885978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331818|gb|EFH62237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 139/269 (51%), Gaps = 26/269 (9%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLITVYLYNK 664
+V +E +LNY+F D +LL EA+T S E ++RLEFLGD+VL + + ++
Sbjct: 3 SVEAVEKILNYTFTDKNLLKEAITKTSGSNTESSSLLFERLEFLGDSVLLVVFSNHIEIT 62
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI--------LHASQELY--KWINI-T 713
YP L P DL D+R A+V+N+ +A +V + LH+ I LH + KW ++
Sbjct: 63 YPNLHPNDLNDVRIANVSNETFARVAVNNNLHQFIIFDAPNPLLHKMSHVLTNKWCHVLK 122
Query: 714 VDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
+ F E + PK L D++E+++GA+++D + + V+E R L+EP+
Sbjct: 123 IKDFSEAVKEEVYPAPCGGLVKAPKFLADLVEAIAGAVYIDVDFDVQRVWEIFRVLVEPI 182
Query: 772 ITPETMRLQPAREL-------NEYCQKHHFSMKKTVAPRINGK--AAVTVEVHANGTLFK 822
T + +R QP R ++ ++ ++ P+I K +V +E+ + ++F
Sbjct: 183 CTLDDLRKQPERTYLRLLGLGDKLGKRIEVFFEEEGGPKIEQKFVCSVNIEIPSVESIF- 241
Query: 823 HTHADAD--KETAKKVASKEVLKSLKASF 849
H DA K A+ ++ ++ +LK+S
Sbjct: 242 HMKGDAKSTKTQAQNSSAYYMIGALKSSL 270
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 27/210 (12%)
Query: 591 VPYERQFQVQAERLVN--VRHLESLLNYSFRDPSLLVEALTHGSY-MLPEIPRCYQRLEF 647
+P+ER + + + + V+ +E +LNYSF + +LL EALTH S +LP +QRL F
Sbjct: 355 LPHERSLESLSSEIDSDPVKAVEKILNYSFTNKNLLREALTHNSSNLLP-----FQRLMF 409
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
+G A + ++Y YP L P +LT +++A+ ND YA +VK G +Y
Sbjct: 410 VGKAGISLAFANHMYLTYPKLGPKELTMLQNANTCNDRYARVAVKRG-----------IY 458
Query: 708 KWINITVDSFERLSLE--STFGWESE------TSFPKALGDIIESLSGAIFVDSGCNKEV 759
+++ V + +R +E G E + PK L D++ES++GA+++D + +
Sbjct: 459 QFLKCNVRTSKRQIIEFIKMLGKEDDPDPFRSVKAPKILTDLVESVAGAVYIDVNRDVKR 518
Query: 760 VFESIRPLLEPMITPETMRLQPARELNEYC 789
++E +R L EP+ T + +R +P L +C
Sbjct: 519 LWEILRGLFEPIYTLDDIRRKPHPLLTLFC 548
>gi|167046030|gb|ABZ10546.1| dicer-like protein D [Placozoa sp. DMJ-2008]
Length = 351
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 157/353 (44%), Gaps = 37/353 (10%)
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F+ E LE LGDS+LK+ + F N EG +S+ + +SN+ L + L +
Sbjct: 6 FNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTLYQ 65
Query: 510 RTEPFDPKMWMIPG----DNSGSYELNDHSLFNERKIYVTGRKKVKS-KTVADVVEALIG 564
PF K W+ PG N+ + N+ ++ K+V S K ++D VE L+G
Sbjct: 66 FNTPFKLKQWLPPGFTCIRNNANLVANNMLTDGSKQRDSESFKQVMSVKNISDTVEGLVG 125
Query: 565 AFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR--HLESLL----NYSF 618
+ G L IG+ +D NV E+ V E L S + +Y F
Sbjct: 126 VYSLASGPVDAARLLPWIGLDID-PNVLIEKDKSVNFEIPTTDEDIQLSSCILRNTDYQF 184
Query: 619 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
+ L A TH S YQRLE+LGDA L+YL+ ++Y + P PG ++ +S
Sbjct: 185 NNFYWLRIAFTHSSVA----SENYQRLEYLGDATLEYLLIEFVYCRKPYFGPGKISHFKS 240
Query: 679 ASVNNDCYALSSVKHGLHKHI-LHASQELYKWINITVDSFERLSLE-------------S 724
N ++L ++ + HI H+ +L I ++ +F+ + L+ +
Sbjct: 241 VMTRNQTFSLIAIAFQFYTHIRCHSKLKLD--IMDSIQNFKEILLDNHQDDHQPDIGHFA 298
Query: 725 TFGWESETS-----FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
++ TS PK D+ E+ AI++D G V++ + +++ ++
Sbjct: 299 NLAYQLYTSNRYQKLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVYKMVQRIL 351
>gi|320585938|gb|EFW98617.1| RNA helicase rnase [Grosmannia clavigera kw1407]
Length = 2671
Score = 102 bits (253), Expect = 1e-18, Method: Composition-based stats.
Identities = 134/499 (26%), Positives = 209/499 (41%), Gaps = 99/499 (19%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT-SKV 437
LP CR+ PM+ F + +P +M L+ L+A L L ++ + + S +
Sbjct: 1024 LPAASCRVDRMPMAAVQFGAL--IPPLMQVLEVHLVAAEL---LSSTRLRELPVSDRSLI 1078
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
AI+ + + E LE +GD+ LK A+ + EG LS+ KDR+++N+ LC
Sbjct: 1079 TTAISAPAARLHDNYEVLEFIGDAVLKLMAAANCAAQNLDAPEGHLSLFKDRLVANSRLC 1138
Query: 498 KLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS-KTVA 556
+ + L FI + + W D + E + G + V S KT+A
Sbjct: 1139 RAATEFGLDRFIVGSQWSLREW------------RDVKIEAEEE--KGGEQLVMSTKTLA 1184
Query: 557 DVVEALIGAFLSTGGENVGL-------------IFLDRIGIKVDFVNVPYERQFQVQAER 603
DVVEALIGA L GG L + L++ + F P + +++
Sbjct: 1185 DVVEALIGAALVDGGLTRALECMRILLPERQPWLSLEKTRATL-FAAAPKQTTWRIPTT- 1242
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR--CYQRLEFLGDAVLDYLITVYL 661
LE LL Y FR PSLL EA+TH S P I C +RLEF+GDAVLDY+I L
Sbjct: 1243 ------LEELLGYQFRRPSLLAEAMTHPS--TPGIREGGCMERLEFIGDAVLDYVIVQRL 1294
Query: 662 Y----NKYPTLSPGDLTDMRSASVNNDC-------YALSS-------------------- 690
K L + +R+ VN +++SS
Sbjct: 1295 LGGKGGKRLDLEHQKMHLLRTTVVNAAFLGFAAMEFSISSEASTVTADGTVTRGEIATPL 1354
Query: 691 ---VKHGLHKHILH---ASQELYKWINITVDSFERLSLESTFGWE--SETSFPKALGDII 742
++HG + A+Q+ + + +V L S + W ++ K DI+
Sbjct: 1355 WAFMRHGGSDEMARMQKAAQKRHAALRESV--LAALWEGSEYPWVQLAQLRLEKGFSDIV 1412
Query: 743 ESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAP 802
E++ GA++VD+G + LLE M ++ R L+E H K
Sbjct: 1413 EAVIGAVWVDAGS-----LGPVEALLEKMGVLSYLQ----RALDE---DVHLRHPKEELG 1460
Query: 803 RINGKAAVTVEVHANGTLF 821
RI+G A + V A ++
Sbjct: 1461 RISGNARLHYRVAAGESVL 1479
>gi|302826370|ref|XP_002994673.1| hypothetical protein SELMODRAFT_432577 [Selaginella moellendorffii]
gi|300137177|gb|EFJ04260.1| hypothetical protein SELMODRAFT_432577 [Selaginella moellendorffii]
Length = 176
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 11/183 (6%)
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG 727
L PG LTD+RSA+VNN +A V+HGLH+H+ H EL I V + + S F
Sbjct: 1 LPPGTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGLVELDCEIRKFVQNVKEKPDASCF- 59
Query: 728 WESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
+ S PK LGD++ES++GAIFVD+ + E ++ + PLL P++TP T+R P L E
Sbjct: 60 --EDLSAPKVLGDLLESITGAIFVDTNFDLERLWRVVLPLLSPLVTPATLRFHPVHILME 117
Query: 788 YCQKHHFSMKKTVAPRINGKAAVTVEVHAN--GTLFKHTHADADKETAKKVASKEVLKSL 845
C +K + A T EV T + +++AK A+ ++L SL
Sbjct: 118 LCA------RKGMKVSFFRTEATTTEVRVTFGEESLVETSQEKPRKSAKIDAALKMLASL 171
Query: 846 KAS 848
+ S
Sbjct: 172 QTS 174
>gi|115462923|ref|NP_001055061.1| Os05g0271300 [Oryza sativa Japonica Group]
gi|50878449|gb|AAT85223.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55908895|gb|AAV67838.1| unknown protein [Oryza sativa Japonica Group]
gi|113578612|dbj|BAF16975.1| Os05g0271300 [Oryza sativa Japonica Group]
Length = 344
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y FRD LL EALTH S+ + YQRLEF+GD+ L + +
Sbjct: 25 ADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNF 82
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER- 719
LY PTL PG L+ +R+A+++ + A +V+H L+ + L + +++ ++
Sbjct: 83 LYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQE 142
Query: 720 ----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI----------- 764
LS G S PK L DI+E+++ A++VD + E +++ +
Sbjct: 143 PEDDLSTVPYGG--SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKRLTWLHGLQEIRW 200
Query: 765 ----------------------RPLLEPMITPETMRLQPARELNEYCQKH 792
R L EP+IT ET+ QP L+E CQKH
Sbjct: 201 TVNTNNIKDWINNFIYGKRLVTRWLFEPIITAETIDEQPVTMLHELCQKH 250
>gi|238492895|ref|XP_002377684.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220696178|gb|EED52520.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 790
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 177/431 (41%), Gaps = 64/431 (14%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
PSI+HR+ L+A L+ + + + A++ S+ +GD
Sbjct: 348 LAPSIIHRIGVYLIAEKLRKQIFSNPQAARFERMDLLCIALSPTDDMHRPEFRSMAFIGD 407
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
+ +K+ ++QLF + HEGLL+ KD I+S+ L C ++ T F+ K W
Sbjct: 408 AIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGKRW- 466
Query: 521 IPGDNSGSYELNDHSLFNERKIYVTG---RKKVKSKTVADVVEALIG-AFLSTGGEN--- 573
F + +G R+ V + TVAD+V+AL G AFL G +
Sbjct: 467 -------------RPFFVSTTLSKSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQAFI 513
Query: 574 --VGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHG 631
+I + + + Y + ++ + LE+LL Y+F D SL +E++TH
Sbjct: 514 CAAAMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESMTHP 573
Query: 632 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN-------- 683
S + Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 574 SCVGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLCL 633
Query: 684 -------------DCYALSSV-----KHGLHKHILHASQELYKWINITVDSF-------- 717
D + SV + L+ + S L ++ V+
Sbjct: 634 TFHWEKQHDIIEVDSMGIPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLHVIK 693
Query: 718 ERLSLESTFGWESETSFP--KALGDIIESLSGAIFVDSGCN---KEVVFE--SIRPLLEP 770
L + W + F K DI++S+ GAI++DS + E + E I PLLE
Sbjct: 694 RDLWENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPLLEH 753
Query: 771 MITPETMRLQP 781
I+ + + P
Sbjct: 754 FISHDVVTDHP 764
>gi|218196456|gb|EEC78883.1| hypothetical protein OsI_19246 [Oryza sativa Indica Group]
gi|222630918|gb|EEE63050.1| hypothetical protein OsJ_17858 [Oryza sativa Japonica Group]
Length = 350
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y FRD LL EALTH S+ + YQRLEF+GD+ L + +
Sbjct: 31 ADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNF 88
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER- 719
LY PTL PG L+ +R+A+++ + A +V+H L+ + L + +++ ++
Sbjct: 89 LYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQE 148
Query: 720 ----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI----------- 764
LS G S PK L DI+E+++ A++VD + E +++ +
Sbjct: 149 PEDDLSTVPYGG--SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKRLTWLHGLQEIRW 206
Query: 765 ----------------------RPLLEPMITPETMRLQPARELNEYCQKH 792
R L EP+IT ET+ QP L+E CQKH
Sbjct: 207 TVNTNNIKDWINNFIYGKRLVTRWLFEPIITAETIDEQPVTMLHELCQKH 256
>gi|336260369|ref|XP_003344980.1| hypothetical protein SMAC_06757 [Sordaria macrospora k-hell]
gi|380095053|emb|CCC07555.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1365
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 176/419 (42%), Gaps = 79/419 (18%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
V A+T+ + + E LE LGD+ LK+ A + NHHE LLS KD +++N L
Sbjct: 827 VTTALTSIGSRAPTNYERLEFLGDTILKFCACLTASALFPNHHERLLSQWKDSLVNNVRL 886
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
C+ D L +I K W + ++ L + + +++ SK VA
Sbjct: 887 CRASIDFGLDEYI-IHSMASKKW--------RPKFVENYLDDSKSPKSAETREMSSKMVA 937
Query: 557 DVVEALIGAF-----LSTGGENVGLIFLDRIGIKVDFVNVPYERQ--FQVQAERLVNVRH 609
DV+E+LIGA +S E + L+ K + ++ R F++ V +
Sbjct: 938 DVIESLIGATYMCGDMSKALECIALLLPTSKSSKFKWQDIGLSRDKLFELAPNDAVLHKQ 997
Query: 610 LESL---LNYSFRDPSLLVEALTHGS-YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
LE L + Y+F SLL+EA+TH S L + CY+RLEFLGDA+LD ++ L +
Sbjct: 998 LEPLEKAMGYAFTKKSLLIEAMTHPSCPGLGDNDSCYERLEFLGDAILDVIVVKRLMAET 1057
Query: 666 P--TLSPGDLTDMRSASVNNDCYALSSV--------------------------KH---- 693
L+ D+ + S+ V D A ++ KH
Sbjct: 1058 GPNELAHNDMHEYLSSVVTADIMAFLAMEWVIARTDTVEIDPARLDAIDSLPFSKHTKIT 1117
Query: 694 -----------GLHKHILHASQELYKWINITVDSFERLSLE-STFGWESETSFPKAL--- 738
+ + H S + +T + + L + T WE P AL
Sbjct: 1118 PANLVSNTEDWAFWRFMRHNSSHVASAQTVTQERYLTLRDDIRTAIWEKH-ELPWALLAR 1176
Query: 739 -------GDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMITPETMRLQPARELN 786
DI+ESL GA++VDSG C + + PLL+ +I + + P EL+
Sbjct: 1177 MGPQKFYSDIVESLVGAVWVDSGSWEVCEHVLNQMGLLPLLDHLIRTKAHVMHPNVELH 1235
>gi|413918887|gb|AFW58819.1| hypothetical protein ZEAMMB73_957371 [Zea mays]
Length = 511
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 153/327 (46%), Gaps = 46/327 (14%)
Query: 47 ICTLYLPNNCPIQTVIAQG--NIKTLKQTACLEACKKLHQIGALTDNLLPD--------V 96
+C L LP N + V Q + K+ ACL+AC KLH++GALTD LLP
Sbjct: 201 VCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKIKVS 260
Query: 97 VVEEHDAQKHGNEPYDAEHPIYFPPELV--NQCPQDTKITYHCYLIELKQNFNYDIPAHD 154
++ K +E + E P ++ ++C D+ H Y IE IPA
Sbjct: 261 TTNNSESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEF-----IPIPADR 315
Query: 155 ----IVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQLTPDKVLLCRRFQIALF 209
L V L E +K++ +L + R R+ +K+LGKI+ ++++L FQ
Sbjct: 316 RYQMFGLFVINRLPEESEKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFL 375
Query: 210 RVIMDHNLDKLNEILKGLWLRDN-LEID---YLLLPASEQ-----SIDWEPV----ASLS 256
+V++D + + IL G D L++D YLLLP ++ IDW V +S +
Sbjct: 376 KVLLDRSEFTPSYILLG---NDGALDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPA 432
Query: 257 FPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNAN 316
F +GL H S + N ++ G + S+V TPH+ +++ +L NA
Sbjct: 433 FQDPMGLSLHD--SYLPNES-LKLLGGTYNKADVIGSLVYTPHTDLFFFVDAILDGTNAK 489
Query: 317 SLFTRNDGGAITYKKHYEERYGIQLCF 343
S GA TY +H+++R+G++ F
Sbjct: 490 SELN----GA-TYAEHFKQRHGVRTFF 511
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+ +L+R
Sbjct: 85 FDLPETVNSFIQSRGRARMSKSKYVFLLER 114
>gi|294463153|gb|ADE77113.1| unknown [Picea sitchensis]
Length = 173
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
++ LE +L Y F+ SLL EA+TH S E Y++LEF+GD+VL YL+T +LY Y
Sbjct: 18 SLSELEDILKYKFKSKSLLKEAITHSSNNNTE---SYEKLEFVGDSVLGYLVTKHLYCAY 74
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L G LT +RS +V+ + +A VKH H+++L + L + I V E S
Sbjct: 75 PKLYQGTLTLLRSRNVDTEKFARVCVKHKFHQYLLLNAPALQQIIEDFVKDIEDESKSFR 134
Query: 726 FGWESETSFPKALGDIIESLSGAIFVD 752
G + PK L DI+ES++GA+FVD
Sbjct: 135 CG---DFKPPKVLADIVESIAGAVFVD 158
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 405 IMHRLQSLLLAVNLKNML--LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSF 462
++ LQSL +V+ ++ L L+ ++ S + EAIT E LE +GDS
Sbjct: 4 VVQSLQSL--SVDTEDSLSELEDILKYKFKSKSLLKEAITHSSNNNTESYEKLEFVGDSV 61
Query: 463 LKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIP 522
L Y ++ L+ Y ++G L++ + R + ++ HK ++ P + I
Sbjct: 62 LGYLVTKHLYCAYPKLYQGTLTLLRSRNVDTEKFARVCVKHKFHQYLLLNA--PALQQII 119
Query: 523 GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA 565
D E +E K + G K K +AD+VE++ GA
Sbjct: 120 EDFVKDIE-------DESKSFRCGDFK-PPKVLADIVESIAGA 154
>gi|255589974|ref|XP_002535144.1| dicer-1, putative [Ricinus communis]
gi|223523936|gb|EEF27239.1| dicer-1, putative [Ricinus communis]
Length = 259
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +L Y F++ SLL EA T S+ P Y+RLE +GD+VL+ L T Y KYP L
Sbjct: 35 VEEILKYKFKNRSLLEEAFTDSSF--PGKCFSYERLEHVGDSVLNLLFTKEHYFKYPNLP 92
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
PG LT +R+A+V+ + A +VKHG H+ + H L + I F + LE
Sbjct: 93 PGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLLEEQIR----EFSQAILEYPLHSN 148
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFE 762
PK L DI+ES GA+F+DS + + V++
Sbjct: 149 GLVDVPKVLADIVESAIGAVFIDSNSSVDTVWK 181
>gi|297794783|ref|XP_002865276.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
gi|297311111|gb|EFH41535.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
Length = 892
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 40/257 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E +LNYSF + +LL E LTH + L +QRL F+G+ L T +LY Y
Sbjct: 349 SVEAVEKILNYSFVNKNLLNELLTHNTSPL------FQRLMFVGEPALSLAFTKHLYLTY 402
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE-- 723
P L P DL+ +R A+ ND YA +VK G +Y++I V+ ER+ L+
Sbjct: 403 PKLEPKDLSLLRDANACNDRYARVAVKKG-----------IYQFIISNVEKPERMILDFI 451
Query: 724 STFGWESE--------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G E + PK L +++ +++GA+++D N + ++E R L EP+ T +
Sbjct: 452 DMMGKEDDPDPDPYRVVKAPKILANLVAAVAGAVYIDVNYNVQRLWEIFRGLFEPIYTLD 511
Query: 776 TMRLQPA-------RELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADA 828
+R+QP R +++ ++ F K ++G +V+ + +F +
Sbjct: 512 DLRMQPKPPFLMLFRLADKHGKRIDFRYSK-----VDGSRKNIAQVYLDD-MFIASGCSK 565
Query: 829 DKETAKKVASKEVLKSL 845
+TAK +A++E L+ L
Sbjct: 566 RIDTAKLLAAEEALQKL 582
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E +LNYSF + +LL +A+T S + + RLEF GD+VL+ T Y+ + Y
Sbjct: 3 SVEAVEKILNYSFTNKTLLKDAITQRSTL-------FDRLEFFGDSVLEVAFTNYIRHTY 55
Query: 666 PTLSPGDLTDMRSASVNNDCYA 687
P L +L D+R+A+V+N+ +A
Sbjct: 56 PNLKVKELCDLRTANVSNEKFA 77
>gi|297794785|ref|XP_002865277.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
gi|297311112|gb|EFH41536.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
Length = 786
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 38/200 (19%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +LNYSF++ +LL EA+T PR ++RLEFLGD+VL+ + Y+++ YP L
Sbjct: 7 VEKILNYSFKNKTLLKEAITLS-------PR-FKRLEFLGDSVLEVALANYIHHAYPNLK 58
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHIL-HASQELYKWINITVDSFERLSLESTFGW 728
+L D+R+A+VNN+ +A ++VKH L++ I+ S + I ++ + + +G
Sbjct: 59 LQELCDLRTANVNNEKFARATVKHNLYQFIIGEKSSSPSEKIKEFSEAVSKEDVPVPYGG 118
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCN---------------------------KEVVF 761
E PK LGDI+ES++GA+++D + +E
Sbjct: 119 LVEA--PKVLGDIVESIAGAVYIDVDFDVQRFWEVCCVCLFFITFVFLISMLLIKREEFL 176
Query: 762 ESIRPLLEPMITPETMRLQP 781
+ R LLEP+ T + +++QP
Sbjct: 177 QIFRGLLEPIYTLDDLQMQP 196
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 27/254 (10%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V+ +E +LNY F + +LL EAL S + +Q+L F+G A L IT ++Y +Y
Sbjct: 471 SVKAVEKILNYVFTNKNLLKEALRQTSSL-------FQKLRFVGRAALVLAITNHIYLRY 523
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES- 724
P P +L ++ + N A +VKH +H+ + + K +++F ++ +
Sbjct: 524 PNFEPRELELLQRGNTCNKTLARVAVKHNIHQFFIGQFKSEKK-----IEAFSKVVGKED 578
Query: 725 ----TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ 780
+ G T+ L D++ES++GA+++D + + ++ES R L EP+ T + +RL+
Sbjct: 579 DPVPSDGRSERTT--NVLSDLVESVAGAVYIDMNFDIKRLWESFRGLFEPLYTLDDLRLR 636
Query: 781 PARELNEYC----QKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P C HF + G V+ + L ++ AK
Sbjct: 637 PQPIHTLSCLGDKDGKHFDFRYEE----KGSNRYKAHVYLDDKLIASGKKKNSRDDAKMS 692
Query: 837 ASKEVLKSLKASFP 850
A+ E ++ L S P
Sbjct: 693 AAMEAVRKLSESMP 706
>gi|242033787|ref|XP_002464288.1| hypothetical protein SORBIDRAFT_01g015663 [Sorghum bicolor]
gi|241918142|gb|EER91286.1| hypothetical protein SORBIDRAFT_01g015663 [Sorghum bicolor]
Length = 255
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 130/255 (50%), Gaps = 22/255 (8%)
Query: 94 PDVVVEEHDAQ--------KHGN--EPYDAEHPIYFPPELVNQCPQDTKIT-YHCYLI-- 140
P E D Q K GN E Y P+YFP ELV+ ++ Y+CY I
Sbjct: 7 PSAAAVETDTQGGEAPSKAKRGNAEEKYQHGQPVYFPEELVDNWVSFSRHGLYYCYSINI 66
Query: 141 ELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLL 200
L+ + N +I+LAV+ ++ + F + G + + +K+L KI L ++V+
Sbjct: 67 SLQGSCNTAADPTNIILAVKCDMGPDF----FWHSFNSGGIGITIKYLCKIHLNQEQVIF 122
Query: 201 CRRFQIALFRVIMDHNLDKLNEILKGLW-LRDNLEIDYLLLPASEQSIDWEPV--ASLSF 257
RRFQ + ++++ + ++++ +K L+ ++ + YLLLP IDW + ++ S
Sbjct: 123 ARRFQTTVLSLLINSDHLEVSDAIKYFHELQVDVGVVYLLLPTVYGKIDWCGIKFSTSSV 182
Query: 258 PCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANS 317
D+ K+ ++ + +A ++QT GP C C++ NSVV P +IY IT + LNAN
Sbjct: 183 YDDVTDKNTRHSHSCKDADILQTMDGPCCRCILQNSVVYAPCDKKIYNITEL--DLNANQ 240
Query: 318 LFTRNDGGAITYKKH 332
N+ A++ K++
Sbjct: 241 PLDLNNRSAVSCKRY 255
>gi|169868762|ref|XP_001840952.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
gi|116498110|gb|EAU81005.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
Length = 2074
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 140/309 (45%), Gaps = 70/309 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVG---LIFLDRIGIKVDFVNVPYERQF-QVQAE--- 602
+ +K +ADV+E+LIGA +GG +G F D +G+K + ++ +VQ E
Sbjct: 1669 LSTKVLADVIESLIGAAYISGGFPLGYECAKFFD-LGLKWAPLPTRVDQILSRVQPEDDI 1727
Query: 603 ----RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 658
+L +V H+ L Y+F+ LL+EALTH SY Y+R+EF+GD++LD ++T
Sbjct: 1728 PIPPQLADVEHM---LGYTFKRKILLIEALTHASYREHINTISYERMEFIGDSILDMVVT 1784
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYAL------------------------------ 688
LY SPG + RSA VN A
Sbjct: 1785 DMLYRAPREYSPGHIHLRRSAVVNGHFLAYICLGMWRELEGVMPQPSASSNAGKDDWNPY 1844
Query: 689 --------SSVKHGLH--KHILHASQELYKWINITVDSFE--------RLSLESTFGWES 730
+ H +H + +LH+SQ++ + TV+ +E L S F W S
Sbjct: 1845 LNPPTFEEGTTAHRIHLSQCLLHSSQQVLDDLRNTVERYELRREEIADALEHGSIFPWSS 1904
Query: 731 ETSF--PKALGDIIESLSGAIFVDSGCNKEVVFESIR-----PLLEPMITPETMRLQPAR 783
T PK L DI+ES GA F+DSG + VV IR P+LE +I + L P
Sbjct: 1905 LTRLQAPKFLSDIVESTIGAAFIDSGFSIPVVTSIIRRIGILPVLERIIRDDVDVLHPVS 1964
Query: 784 ELNEYCQKH 792
L+ + ++
Sbjct: 1965 RLSMWAAQN 1973
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 432 IPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
IP + A+T E + + LETLGD+ LK+ A Q+F Y HEG L+ +KD +
Sbjct: 1488 IPLDVLTVALTAPVAGERHNYQRLETLGDTVLKFLAGIQIFAEYPMWHEGYLTKRKDHAV 1547
Query: 492 SNAALCK 498
+N L K
Sbjct: 1548 ANVRLAK 1554
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLE LGD VL +L + ++ +YP G LT + +V N A VK G+ + I+
Sbjct: 1508 YQRLETLGDTVLKFLAGIQIFAEYPMWHEGYLTKRKDHAVANVRLAKECVKRGVVRWIIR 1567
Query: 702 ASQELYKW 709
KW
Sbjct: 1568 DRLLGKKW 1575
>gi|50897085|dbj|BAD34723.1| Dicer-related RNase III protein Dcr2p [Tetrahymena thermophila]
Length = 1838
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
C QRLEFLGDAVLD +I YL+NK+P PG+LT M+++ V N L ++ G +K I+
Sbjct: 1621 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFII 1680
Query: 701 HASQELYKWINITVDSFERLSLESTFGWES--ETSFPKALGDIIESLSGAIFVDSGCN-- 756
+ Q + I + +++ E +++ +++ S K LGD+IESL GAIF+D+ +
Sbjct: 1681 GSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQSLIKTLGDVIESLVGAIFIDNNLDYE 1740
Query: 757 --KEVVFESIRPLLEPMITPETMRLQ 780
K++V E++ + T + RL+
Sbjct: 1741 ITKKIVMETLFAEILQYFTGQEHRLK 1766
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 48/226 (21%)
Query: 452 LESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI-- 509
LE E LGD+ LK +S Q++ + E L V + II N L ++ K+ +I
Sbjct: 1327 LERYEFLGDTVLKCLSSTQIYFEHPKSMEDHLHVHRTIIIQNRNLAQIAVKKKIFKYILS 1386
Query: 510 -RTEPFDP---KMWMIPGDNSGSY-----ELNDHSLFNERKIYVTGRKK----------- 549
+ E P K + D+ + E +++ ++R G ++
Sbjct: 1387 SKIETLSPIGIKYEIAVDDDEQNQFQKEKEPDEYDKADQRNKNKKGNEEDGDAENEEIEE 1446
Query: 550 -------------------VKSKTVADVVEALIGAFLSTGGE-NV--GLIFLDRIGIKVD 587
+K KT+AD +E++IG F + N+ L+F ++ K D
Sbjct: 1447 QQQQNDIPNLLRLEPTYRHIKGKTLADTLESIIGVFFQQKKDLNLCQYLLFSLQVLNKPD 1506
Query: 588 FV-NVPYER---QFQVQAERLVNVRHLESLLNYSFRDPSLLVEALT 629
N Y+R Q Q+Q V ++ +ES+L Y+F++ +LL +A T
Sbjct: 1507 LTFNHSYDRSLQQSQLQNPIYVQLKEIESILGYTFQNINLLFQAFT 1552
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI--- 509
+ LE LGD+ L + LF + N G L+ K ++ N LC + FI
Sbjct: 1623 QRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFIIGS 1682
Query: 510 ------RTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALI 563
E + M GD S Y+ + +N+ I KT+ DV+E+L+
Sbjct: 1683 IQHNKEEIELLLNNVEMFMGDTSLMYD----TTYNQSLI----------KTLGDVIESLV 1728
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR-HLESLLNYSFRDPS 622
GA N+ +I ++ F + + F Q RL N++ ++E +L F S
Sbjct: 1729 GAIFIDN--NLDYEITKKIVMETLFAEIL--QYFTGQEHRLKNLQLYIEKVLKKEFGKVS 1784
Query: 623 LL 624
L+
Sbjct: 1785 LI 1786
>gi|146180696|ref|XP_001470932.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146144409|gb|EDK31487.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1822
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
C QRLEFLGDAVLD +I YL+NK+P PG+LT M+++ V N L ++ G +K I+
Sbjct: 1605 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFII 1664
Query: 701 HASQELYKWINITVDSFERLSLESTFGWES--ETSFPKALGDIIESLSGAIFVDSGCN-- 756
+ Q + I + +++ E +++ +++ S K LGD+IESL GAIF+D+ +
Sbjct: 1665 GSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQSLIKTLGDVIESLVGAIFIDNNLDYE 1724
Query: 757 --KEVVFESIRPLLEPMITPETMRLQ 780
K++V E++ + T + RL+
Sbjct: 1725 ITKKIVMETLFAEILQYFTGQEHRLK 1750
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI--- 509
+ LE LGD+ L + LF + N G L+ K ++ N LC + FI
Sbjct: 1607 QRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFIIGS 1666
Query: 510 ------RTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALI 563
E + M GD S Y+ + +N+ I KT+ DV+E+L+
Sbjct: 1667 IQHNKEEIELLLNNVEMFMGDTSLMYD----TTYNQSLI----------KTLGDVIESLV 1712
Query: 564 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR-HLESLLNYSFRDPS 622
GA N+ +I ++ F + + F Q RL N++ ++E +L F S
Sbjct: 1713 GAIFIDN--NLDYEITKKIVMETLFAEIL--QYFTGQEHRLKNLQLYIEKVLKKEFGKVS 1768
Query: 623 LL 624
L+
Sbjct: 1769 LI 1770
>gi|343428057|emb|CBQ71581.1| related to cell cycle control protein dicer [Sporisorium reilianum
SRZ2]
Length = 1683
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 35/368 (9%)
Query: 420 NMLLDHCMQNVTIPTSK-----VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKT 474
+LL H N T+ S+ VLEA+T+ F E LE LGD+FLK A+ F T
Sbjct: 1126 QLLLAHAC-NATLFASRLDTDLVLEALTSPAAGSSFDYERLEFLGDTFLKLVATCHTFTT 1184
Query: 475 YQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG---FIRTEPFDPKMWMIPGDNSGSYEL 531
+ E L + I++N L K +L F + W G +
Sbjct: 1185 HLGRTEAELHLANKAILTNVRLLKEARRVRLERWGVFGSCRCVVRRFWAPRVGGLGGRLV 1244
Query: 532 ---NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLD-------R 581
+ + +E + + VK KT++D+VEAL+GA L T G ++ L+
Sbjct: 1245 LGEGEEVVVDEDEC-----EAVKEKTLSDMVEALLGAALLTAGPDLALLVCRVFNLLPAS 1299
Query: 582 IGIKVDFVNVPYERQFQVQAERL------VNVRHLESLLNYSFRDPSLLVEALTHGSYML 635
I F ++ + Q AE + HL+SL ++++R P L +EA TH S +
Sbjct: 1300 ITTLASFNDLLLTLKQQAIAENWQSRISRSGLDHLQSLFDHTYRYPHLGLEAFTHPSLLA 1359
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
+P YQRLEFLGDA LD+ I ++ + SPG++T + +N V+ GL
Sbjct: 1360 SVLP-SYQRLEFLGDAWLDFCIVRMIFAEGEERSPGEMTAHKGVLASNGALGALGVRLGL 1418
Query: 696 HKHILHASQELYKWINITVDSFERLSLESTFGW---ESETSFPKALGDIIESLSGAIFVD 752
H + S L I + + + + W PKA+ D++E+ +I VD
Sbjct: 1419 HAFVASDSAVLGDSIARYAAALGSVDEKGQY-WTRLARGVVVPKAVADVVEASFASIVVD 1477
Query: 753 SGCNKEVV 760
SG + VV
Sbjct: 1478 SGFDARVV 1485
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 38/264 (14%)
Query: 383 LCRII-MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNML----LDHCMQNVTIPTSKV 437
+CR+ + P S++T SF ++ L+ +A N ++ + LDH +Q++ T +
Sbjct: 1289 VCRVFNLLPASITTLASFN---DLLLTLKQQAIAENWQSRISRSGLDH-LQSLFDHTYRY 1344
Query: 438 ----LEAITTKKCQEGF--HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRII 491
LEA T + LE LGD++L + + +F + G ++ K +
Sbjct: 1345 PHLGLEAFTHPSLLASVLPSYQRLEFLGDAWLDFCIVRMIFAEGEERSPGEMTAHKGVLA 1404
Query: 492 SNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVT--GRKK 549
SN AL LG L F+ ++ + GD+ Y S+ +E+ Y T R
Sbjct: 1405 SNGALGALGVRLGLHAFVASDS------AVLGDSIARYAAALGSV-DEKGQYWTRLARGV 1457
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-DFVNVP-YERQFQVQAERLVNV 607
V K VADVVEA + + G F R+ +V + + VP YER + A ++ V
Sbjct: 1458 VVPKAVADVVEASFASIVVDSG------FDARVVQRVFELMCVPFYERFCRYDALQVSEV 1511
Query: 608 RHLESLLNYSFRDPSLLVEALTHG 631
R +L ++F + + A+TH
Sbjct: 1512 RR---VLEFAF---ATVRRAVTHA 1529
>gi|167046018|gb|ABZ10540.1| dicer-like protein A [Placozoa sp. DMJ-2008]
Length = 351
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 161/358 (44%), Gaps = 54/358 (15%)
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
+E + ++ +G F+K + L++T + + L++K+ + S L L +
Sbjct: 4 AEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNI 63
Query: 506 PGFIRTEPFDP-KMWMIPG--------DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
P +I ++PF+ K W+ PG D+S S D +L I + K++A
Sbjct: 64 PSYIISKPFNQLKCWIPPGFTFSIRCKDDSSS----DSALAERTIIESITDNFLSVKSIA 119
Query: 557 DVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FVNVPYERQFQVQAERLVN--------- 606
+ + A++GA L E GL FL +G ++ F ++ F V E++ +
Sbjct: 120 ECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSI--SNGFDVWNEKITHMIQESNSQS 177
Query: 607 ----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
+ E L Y F + L+ A TH S + Y++LEF+GD++L+YL+ YL+
Sbjct: 178 WLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGD-SFNYEKLEFVGDSILNYLVIKYLF 236
Query: 663 NKYPTLSPGDLTDMR---SASVNNDCYALSSVKHGLHKHILHASQELYKWI----NITVD 715
+ D+T + +++N+ Y L S + H H+ + S + + I T D
Sbjct: 237 ----LATDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQSPFVKEMILGFEKKTAD 291
Query: 716 SFERLSLE---STFGW---------ESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
E S+ + W + + S PK L D+ ESL+ AI+ DSG N V+
Sbjct: 292 LLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLAAAIYFDSGQNLSTVW 349
>gi|167046016|gb|ABZ10539.1| dicer-like protein A [Trichoplax adhaerens]
Length = 351
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 161/358 (44%), Gaps = 54/358 (15%)
Query: 446 CQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKL 505
+E + ++ +G F+K + L++T + + L++K+ + S L L +
Sbjct: 4 AEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNI 63
Query: 506 PGFIRTEPFDP-KMWMIPG--------DNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
P +I ++PF+ K W+ PG D+S S D +L I + K++A
Sbjct: 64 PSYIISKPFNQLKCWIPPGFTFSIRCKDDSSS----DSALAERTIIESITDNFLSVKSIA 119
Query: 557 DVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FVNVPYERQFQVQAERLVN--------- 606
+ + A++GA L E GL FL +G ++ F ++ F V E++ +
Sbjct: 120 ECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSI--SNGFDVWNEKITHMIEESNSQS 177
Query: 607 ----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
+ E L Y F + L+ A TH S + Y++LEF+GD++L+YL+ YL+
Sbjct: 178 WLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGD-SFNYEKLEFVGDSILNYLVIKYLF 236
Query: 663 NKYPTLSPGDLTDMR---SASVNNDCYALSSVKHGLHKHILHASQELYKWI----NITVD 715
+ D+T + +++N+ Y L S + H H+ + S + + I T D
Sbjct: 237 ----LATDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQSPFVKEMILGFEKKTAD 291
Query: 716 SFERLSLE---STFGW---------ESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
E S+ + W + + S PK L D+ ESL+ AI+ DSG N V+
Sbjct: 292 LLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLAAAIYFDSGQNLSTVW 349
>gi|350289218|gb|EGZ70443.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1547
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 35/305 (11%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
+P+ ++ L+A +L L C+Q +P + A+ + + + E LE +GD+
Sbjct: 963 IPAFTRAVEMSLVAADLMYNRLG-CLQLDNLPL--ITTALISSGSRGPTNYERLEFIGDT 1019
Query: 462 FLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI----RTEPFDPK 517
LK+ A + NHHE LLS KD++++N LC+ D L +I ++ + PK
Sbjct: 1020 ILKFCACLTASALFPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYIIHSAASKKWRPK 1079
Query: 518 MWMIPGDNSGSYELNDHSLFNERKIYVTGR-KKVKSKTVADVVEALIGAFLSTGG----- 571
+ D+ +E K + +++ SK VADVVE+LIGA GG
Sbjct: 1080 F------------VEDY--LDEMKSPESAETRQMSSKMVADVVESLIGAAYMCGGMSKAL 1125
Query: 572 ENVGLIFLDRIGIKVDFVNVPYERQ--FQVQAERLVNVRHLESL---LNYSFRDPSLLVE 626
E V L+ + + + R F+ + + + LE L ++Y+F SLL+E
Sbjct: 1126 ECVALLLPTPKSSQFKWQEISLSRAQLFEFAPKDAILSKQLEPLEKAMSYTFHKKSLLIE 1185
Query: 627 ALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP--TLSPGDLTDMRSASVNN 683
A+TH S L CY+ LEFLGDA+LD ++ L + L+ D+ + S+ V
Sbjct: 1186 AMTHPSCAGLSTNESCYELLEFLGDAILDVIVVKRLMAETGPNELAHNDMHEHLSSVVTA 1245
Query: 684 DCYAL 688
D A
Sbjct: 1246 DIMAF 1250
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P Y+RLEF+GD +L + + +P L+ + VNN +S GL ++
Sbjct: 1007 PTNYERLEFIGDTILKFCACLTASALFPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEY 1066
Query: 699 ILHASQELYKWINITVDSF--ERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
I+H++ KW V+ + E S ES E+ K + D++ESL GA ++ G +
Sbjct: 1067 IIHSAAS-KKWRPKFVEDYLDEMKSPESA---ETRQMSSKMVADVVESLIGAAYMCGGMS 1122
Query: 757 K 757
K
Sbjct: 1123 K 1123
>gi|321468043|gb|EFX79030.1| hypothetical protein DAPPUDRAFT_319984 [Daphnia pulex]
Length = 488
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 17/183 (9%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+ L ++ E++L+Y+ D +L+EA THG+ M + YQRLE +GDA L +L +
Sbjct: 79 DELNSLAKFENILHYTSNDKEVLLEAFTHGNSMKSQ---NYQRLELIGDAALGFLSALNF 135
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI----------N 711
+ K T + GD+T +RSA V ND + + + K+G H+H+ + L K + N
Sbjct: 136 FKKSLTHTSGDITKLRSACVCNDTFGVWAAKYGFHEHVQNLPPILLKQLNDFLEVVEREN 195
Query: 712 ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
T FER + ++ + P L D+ E++ GAI +D+ + FE++ +
Sbjct: 196 FTFAPFERELAANGQIMATQVAIPSFLADVFEAVEGAIIIDANLS----FETLERVYARF 251
Query: 772 ITP 774
+TP
Sbjct: 252 MTP 254
>gi|156032684|ref|XP_001585179.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980]
gi|154699150|gb|EDN98888.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1867
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 172/428 (40%), Gaps = 98/428 (22%)
Query: 381 PELCRIIMGPMSLSTFYSFT-----FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS 435
P+ C +I+ P+ +S + +P+I+HR++S L+A+ ++L ++ I
Sbjct: 1326 PKKCFVILEPLKVSPLSTTVVAMAYLLPAIIHRVESYLIALEATDLL------HLDIRPD 1379
Query: 436 KVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
LEA+T + +E G + E LE LGD FLK S L+ + E
Sbjct: 1380 LALEAVTKDSDNSEEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISLYGLNPDSDEF 1439
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
V + +I N L +L FIR+ F+ + W G L +
Sbjct: 1440 RYHVDRMCLICNKNLFNTALKLELYRFIRSAAFNRRAWYPEGPE----------LLRGKT 1489
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFV 589
K+ K++ADV EA+IGA L + E+ + R +V D+
Sbjct: 1490 ATAPNTHKLGDKSIADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNSDNHKAIVWSDYY 1549
Query: 590 NVPYERQFQ---VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLP--EIPRCYQR 644
+ + ++Q A ++ R +E+ Y F+ P LL A TH +Y +IP YQR
Sbjct: 1550 KLYQKPKYQTAVATAAQIDLARQVETKHPYHFKYPRLLRSASTHPAYPFSYEQIP-SYQR 1608
Query: 645 LEFLGDAVLDY---LITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
LEFLGDA+LD ++ Y + L D + A + D YA
Sbjct: 1609 LEFLGDALLDMVQKMVAEYACDINEALIQAK-ADAKRAGKSEDDYAPDY----------- 1656
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
WI + PK L D++E+ GAIFVDS E F
Sbjct: 1657 -------WITVRQP-------------------PKCLPDMVEAFIGAIFVDS----EYKF 1686
Query: 762 ESIRPLLE 769
E + E
Sbjct: 1687 EEVEKFFE 1694
>gi|339264092|ref|XP_003366828.1| endoribonuclease Dicer [Trichinella spiralis]
gi|316961980|gb|EFV48479.1| endoribonuclease Dicer [Trichinella spiralis]
Length = 325
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP--RCYQRLEFLGDAVLDYLITVYLYN 663
++ E+ + Y F + + L++ALTH Y E P Y+RLEFLGDA+LDYLI+ +LY+
Sbjct: 62 DLNSFEAKIGYRFTNKAYLIQALTHSLYNEVETPVTDSYERLEFLGDAILDYLISRHLYS 121
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI-----TVDSFE 718
SPG L+D+R+A VNN ++ +++ + A + L + +N ++ +
Sbjct: 122 SKRIRSPGLLSDLRAALVNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMMEEEQ 181
Query: 719 RLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFE 762
+ T + PK LGDI ES++GAIF+DS C+ V++
Sbjct: 182 DDDEKETSEFAEHVEVPKPLGDIFESVAGAIFLDSHCSLATVWQ 225
>gi|161783812|sp|Q7SCC1.3|DCL2_NEUCR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl-2; Includes: RecName:
Full=ATP-dependent helicase dcl-2
gi|18376024|emb|CAB91758.2| related to RNA helicase/RNAseIII CAF [Neurospora crassa]
Length = 1540
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 183/430 (42%), Gaps = 91/430 (21%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
+P+ ++ L+A +L L C+Q +P + A+ + + + E LE +GD+
Sbjct: 950 IPAFTRAVEMSLVAADLMYNRLG-CLQLDNLPL--ITTALISSGSRGPTNYERLEFIGDT 1006
Query: 462 FLKYAA--SQQLFKTYQ----NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI----RT 511
LK+ A + + NHHE LLS KD++++N LC+ D L +I +
Sbjct: 1007 ILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYIINSAAS 1066
Query: 512 EPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGR-KKVKSKTVADVVEALIGAFLSTG 570
+ + PK + D+ +E K ++ +++ SK VADVVE+LIGA G
Sbjct: 1067 KKWRPKF------------VEDY--MDEMKSPISAETRQMSSKMVADVVESLIGAAYMCG 1112
Query: 571 G-----ENVGLIFLDRIGIKVDFVNVPYERQ--FQVQAERLVNVRHLESL---LNYSFRD 620
G E V L+ + + + R F+ + + + LE L ++Y+F
Sbjct: 1113 GMSKALECVALLLPTPKSSQFKWQEIELSRTQLFEFAPKDAILSKQLEPLEKAMDYTFNK 1172
Query: 621 PSLLVEALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP--TLSPGDLTDMR 677
SLL+EA+TH S L CY+RLEFLGDA+LD ++ L + L+ D+ +
Sbjct: 1173 KSLLIEAMTHPSCAGLGTNESCYERLEFLGDAILDVIVVKRLMAETGPNELAHNDMHEHL 1232
Query: 678 SASVNNDCYALSSVKH------------------GL----------------------HK 697
S+ V D A +++ GL +
Sbjct: 1233 SSVVTADIMAFLAMEWVIMQTDINEIDPTNLDALGLLPSSQSRITPASLVSNKEDWPFWR 1292
Query: 698 HILHASQELYKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSG 747
+ H S ++ T++ + L E + P AL DI+ESL G
Sbjct: 1293 FMRHNSPQVGATQTATIERYLTLRDEIRDAIWKHNTLPWALLARMGPQKFYSDIVESLIG 1352
Query: 748 AIFVDSGCNK 757
A++VDSG K
Sbjct: 1353 AVWVDSGSWK 1362
>gi|297804712|ref|XP_002870240.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
gi|297316076|gb|EFH46499.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
Length = 214
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITV 659
++L+ + LE +LNY F+D LLV+A T SY+ +C Y+ LE LGD++L+ I
Sbjct: 25 DQLLEIESLEKILNYKFKDKRLLVQAFTDASYV---DDKCDSYEILELLGDSILNMSIID 81
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
YP SPG LT +R+ +V+ + A +VKH L++++ H L + I V++ E+
Sbjct: 82 EFIKLYPKESPGPLTKLRAVNVDTEKLARVAVKHQLYRYLRHKKPLLEEQILEFVEAMEK 141
Query: 720 LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFE 762
L S PK L DI+ES GA+F D CN E V+E
Sbjct: 142 YPLHSN----GLLKVPKVLADIVESTIGALFRD--CNSTETVWE 179
>gi|330802362|ref|XP_003289187.1| hypothetical protein DICPUDRAFT_79950 [Dictyostelium purpureum]
gi|325080763|gb|EGC34305.1| hypothetical protein DICPUDRAFT_79950 [Dictyostelium purpureum]
Length = 1059
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 133/313 (42%), Gaps = 74/313 (23%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
+ LE LGDS LK A+S LF Y EG LS+++ I N L ++ L +R
Sbjct: 789 QRLEYLGDSVLKLASSIYLFYKYSGSKEGALSMERANNIKNDNLIEVSKRMHLDEILR-- 846
Query: 513 PFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAF-LSTGG 571
++ ++K K ADV+EAL GA L G
Sbjct: 847 -------------------------------LSNSDEIK-KPHADVIEALFGAISLDRGF 874
Query: 572 ENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLL-NYSFR--DPSLLVEAL 628
E I + R V +P +Q E V L +LL N R PSLL EA
Sbjct: 875 EKAYEIIV-RYVFNDSNVRLPL---YQSSMEETVLSHDLRTLLFNLDLRIDHPSLLEEAF 930
Query: 629 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYAL 688
+ G+ + YQRLEF+GD VLDY+ YLY ++P + G LT+ RS V N+
Sbjct: 931 SSGTNV------NYQRLEFVGDGVLDYITADYLYKEFPEYNEGTLTEFRSRLVRNN---- 980
Query: 689 SSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGA 748
++ AS+ L NIT + ER +L PK LGD ESL G
Sbjct: 981 ---------NLSDASKRLKLPPNITDE--ERAALP-----------PKRLGDYFESLVGC 1018
Query: 749 IFVDSGCNKEVVF 761
+ +D G + F
Sbjct: 1019 LVLDRGVEETKQF 1031
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 43/217 (19%)
Query: 547 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
R K K DV I +F+ + G+ L F I V QF R+V+
Sbjct: 697 RNKYFQKNPLDVRSLGIPSFIHSIGKLAILPFYSEINWCVRLA------QFNT---RIVS 747
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY------QRLEFLGDAVLDYLITVY 660
++ + +L +F PS LP Y QRLE+LGD+VL ++Y
Sbjct: 748 LKSYK-ILREAFTHPSTKASNRLIPPSELPMFKDYYPYLGDNQRLEYLGDSVLKLASSIY 806
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
L+ KY G L+ R+ ++ ND +++ S+ ++ +D RL
Sbjct: 807 LFYKYSGSKEGALSMERANNIKND-------------NLIEVSKRMH------LDEILRL 847
Query: 721 SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
S + K D+IE+L GAI +D G K
Sbjct: 848 S--------NSDEIKKPHADVIEALFGAISLDRGFEK 876
>gi|379055829|emb|CCD32418.1| dicer-1b, partial [Acyrthosiphon pisum]
gi|379055831|emb|CCD32419.1| dicer-1b, partial [Acyrthosiphon pisum]
gi|379055837|emb|CCD32422.1| dicer-1b, partial [Acyrthosiphon pisum]
gi|379055843|emb|CCD32425.1| dicer-1b, partial [Acyrthosiphon pisum]
Length = 272
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 19/211 (9%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+TT +G+ LE LET+GDSFLKYA + L+ T+ N HEG+LS + +SN
Sbjct: 65 SILLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVSNL 124
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
L +LG + + F+P+ +P G ++L + ++ N I +T + K+
Sbjct: 125 NLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKL-EKAVINS-NISIT-QHITNDKS 181
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYERQFQVQAERLVN---- 606
+AD VEALIGA+L + G L+F+ +GI V D + Y + R VN
Sbjct: 182 IADCVEALIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLPPSPLLRNVNDPEG 241
Query: 607 --------VRHLESLLNYSFRDPSLLVEALT 629
E L Y F+D S L++A+T
Sbjct: 242 ELTKLMDGFESFEQHLGYYFQDRSYLLQAMT 272
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS+L++ALT + + +RLE +GD+ L Y +T YLY + + G L+D+RS
Sbjct: 64 PSILLQALTTANAI---DGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNH 120
Query: 681 VNN-DCYALSSVKHGLHKHILHASQELYKWI---NITVDSFERLSLESTFGWESETSFPK 736
V+N + Y L +K + I + W+ I E+ + S + K
Sbjct: 121 VSNLNLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKLEKAVINSNISITQHITNDK 180
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFES 763
++ D +E+L GA + G ++F S
Sbjct: 181 SIADCVEALIGAYLISCGTRGALLFMS 207
>gi|379055841|emb|CCD32424.1| dicer-1b, partial [Acyrthosiphon pisum]
Length = 272
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 19/211 (9%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+TT +G+ LE LET+GDSFLKYA + L+ T+ N HEG+LS + +SN
Sbjct: 65 SILLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVSNL 124
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
L +LG + + F+P+ +P G ++L + ++ N I +T + K+
Sbjct: 125 NLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKL-EKAVINS-NISIT-QHITNDKS 181
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYERQFQVQAERLVN---- 606
+AD VEALIGA+L + G L+F+ +GI V D + Y + R VN
Sbjct: 182 IADCVEALIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLPPSPLLRNVNDPEG 241
Query: 607 --------VRHLESLLNYSFRDPSLLVEALT 629
E L Y F+D S L++A+T
Sbjct: 242 ELTKLMDGFESFEQHLGYYFQDRSYLLQAMT 272
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS+L++ALT + + +RLE +GD+ L Y +T YLY + + G L+D+RS
Sbjct: 64 PSILLQALTTANAI---DGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNH 120
Query: 681 VNN-DCYALSSVKHGLHKHILHASQELYKWI---NITVDSFERLSLESTFGWESETSFPK 736
V+N + Y L +K + I + W+ I E+ + S + K
Sbjct: 121 VSNLNLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKLEKAVINSNISITQHITNDK 180
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFES 763
++ D +E+L GA + G ++F S
Sbjct: 181 SIADCVEALIGAYLISCGTRGALLFMS 207
>gi|321457594|gb|EFX68677.1| hypothetical protein DAPPUDRAFT_329838 [Daphnia pulex]
Length = 291
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 17/183 (9%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+ L ++ E++L+Y+ D +L+EA THG+ M + YQRLE +GDA L +L +
Sbjct: 79 DELNSLAKFENILHYTSNDKEVLLEAFTHGNSMKSQ---NYQRLELIGDAALGFLSALNF 135
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI----------N 711
+ K T + GD+T +RSA V ND + + + K+G H+H+ + L K + N
Sbjct: 136 FIKSLTHTSGDITKLRSACVCNDTFGVWAAKYGFHEHVQNLPPILLKQLNDFLEVVEREN 195
Query: 712 ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
T FER + ++ + P L D+ E++ GAI +D+ + FE++ +
Sbjct: 196 FTFAPFERELAANGQIMATQVAIPSFLADVFEAVEGAIIIDANLS----FETLERVYARF 251
Query: 772 ITP 774
+TP
Sbjct: 252 MTP 254
>gi|300709179|ref|XP_002996756.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
gi|239606080|gb|EEQ83085.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
Length = 1131
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 151/355 (42%), Gaps = 50/355 (14%)
Query: 447 QEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLP 506
Q E E +GDS LKY+ S+ LF + L+S K D ++ N L ++G L
Sbjct: 790 QNDLGYERFEFIGDSVLKYSVSKFLFTECGYNLNKLVSTK-DSLVCNDHLYRVGRQINLQ 848
Query: 507 GFIRTEPFDPKMWMIPG------DNSGSYELNDHSLFNERKIY----VTGRKKVKS---- 552
+ + ++ P D S LN +LF Y + RK+ +
Sbjct: 849 KYFSLNRYTEHLFQPPAILDLEFDKSLIESLNLKNLFQNNNQYNFVKLYSRKQSQDTNLE 908
Query: 553 ---KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV---- 605
K AD+VE+LIG G F+ IGI + + + F + ++
Sbjct: 909 KGKKVYADIVESLIGVHYIEQGFQKAWNFIKSIGILENHGSKRHSNNFMTKTPNIILLCE 968
Query: 606 --------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI-PRCYQRLEFLGDAVLDYL 656
N+ +E ++NY+F++ + +A+ H SY +Q+LE +GD LD
Sbjct: 969 YEGILPLANILKVEKIINYTFKNKGYIEKAMIHPSYKDNIFGSERFQKLELVGDCFLDLK 1028
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS 716
++ Y++ KY P L R + VNN +A+ K GL+ S
Sbjct: 1029 VSDYIFFKYTDADPETLHTHRKSLVNNHTFAMILFKSGLYDF-----------------S 1071
Query: 717 FERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
F LS ++ ++ S K GDI E+L+GA+ +DS + E+ + +L+ M
Sbjct: 1072 FTGLSDQTRDFNNNKVS--KCYGDIFEALAGAVILDSEFDFEMTDMFFKTVLKLM 1124
>gi|403361874|gb|EJY80651.1| Dicer-2 protein [Oxytricha trifallax]
Length = 1140
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 152/347 (43%), Gaps = 58/347 (16%)
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIK-----VDFVNVPYERQFQVQAERLVNVRH 609
+ D + L F ENV F D + ++ VD + Y+ ++ E L+
Sbjct: 799 IQDQSKDLFNKFFMVEKENVPSNFKDMLQLRFETLEVDELGSAYDLCRYLKGEYLIKKAL 858
Query: 610 L------ESLLNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLGDAVLDYL-----I 657
+ E++LNY F++P LL+EALTH S EI CY++LE LGD++LDYL I
Sbjct: 859 VLLEDLQENVLNYKFKNPLLLIEALTHKSAKDQLEINLCYEKLEVLGDSILDYLCNYSLI 918
Query: 658 TVYLYNKY-----------PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS--- 703
++ +Y +P D +S V N+ A +V G+HK+I +
Sbjct: 919 YYTMFERYIEKDPVQYQIEEHFTPSDAHQSKSLLVKNELLAKITVLLGIHKYIFYQDTLG 978
Query: 704 ----QELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEV 759
+E+ ++ + RL+ +E PK LGD+ ESL GAIF+D G N
Sbjct: 979 LFDKKEVSDYLKYSFRPNFRLNQREVELFEC----PKLLGDVFESLMGAIFIDGGMN--A 1032
Query: 760 VFESIRPLLEPMIT-----PETMRLQPARELNEYCQKHHFSMKKT-------VAPRINGK 807
V + R L+ P + + + +P E H F +K V +++ +
Sbjct: 1033 VIQVFRNLVGPFVLFIAQFSKKLYKEPKEEF--LLTSHSFKIKPQYKFYEVPVVIQVDEQ 1090
Query: 808 AA---VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
+ EV N T ++K+ A++ AS E L + ++ G
Sbjct: 1091 TQAEMIKAEVIFNNGEVMCTAYGSNKKQAERNASVEGLNFIDRTYKG 1137
>gi|2244899|emb|CAB10321.1| UFD1 like protein [Arabidopsis thaliana]
gi|7268289|emb|CAB78584.1| UFD1 like protein [Arabidopsis thaliana]
Length = 778
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
++L+ + LE +LNY F+D SLL++A T SY + + Y+ LE LGD++L+ I
Sbjct: 49 DQLMEIESLEKILNYKFKDKSLLLKAFTDASY-VDDKSESYELLELLGDSILNMGIIYDF 107
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
YP +PG LT +R+ +V+ + A +V H L+ ++ H L + I V++ E+
Sbjct: 108 IKLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYP 167
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
L S PK L DI+ES GAIF+D CN
Sbjct: 168 LHSN----GLLKVPKVLADIVESTIGAIFMD--CN 196
>gi|374854311|dbj|BAL57196.1| ribonuclease III [uncultured prokaryote]
Length = 239
Score = 90.5 bits (223), Expect = 3e-15, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 111/239 (46%), Gaps = 41/239 (17%)
Query: 617 SFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
+FRD SLL+ ALTH SY PE+ +RLEFLGDAVLD+++ ++Y+ YP L G+LT
Sbjct: 20 TFRDWSLLLRALTHRSYCNEHPEVTEDNERLEFLGDAVLDFIVGEWVYHHYPELREGELT 79
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-ESTFGWESETS 733
+RSA V N+ L+S I + + RL E+ G TS
Sbjct: 80 RLRSALVRNE--QLASFAR-----------------QIDLGAALRLGAGEAASGARQRTS 120
Query: 734 FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP--ETMRLQPARELNEYCQK 791
LG E+L GA+++D+G F +RP LE + T L P L E+ Q
Sbjct: 121 L---LGSAFEALIGALYLDAGLETASRF--VRPFLEKTVAALEWTHLLDPKSRLQEWAQ- 174
Query: 792 HHFSMKKTVAPRINGKAAVTVEVHA--NGTLFKHTHADADKETAKKVASKEVLKSLKAS 848
A R+ VT+ H + LF+ D+ + + + +LKA+
Sbjct: 175 ---------AQRLGTPRYVTIAAHGPEHAPLFEVEVYIGDRAYGRGAGPNKQIAALKAA 224
>gi|379055833|emb|CCD32420.1| dicer-1b, partial [Acyrthosiphon svalbardicum]
gi|379055835|emb|CCD32421.1| dicer-1b, partial [Acyrthosiphon kondoi]
Length = 272
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 19/211 (9%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+TT +G +LE LET+GDSFLKYA + L+ T+ N HEG+LS + +SN
Sbjct: 65 SILLQALTTSNANDGINLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVSNL 124
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
L +LG + + F+P+ +P ++L + ++ N I +T + + K+
Sbjct: 125 NLYRLGKLKMFGERMISTKFEPRSNWLPPCFIEPHKL-EKAVINSN-ISIT-QHIINDKS 181
Query: 555 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYER-----------QFQV 599
+AD VEALIGA+L + G L+F+ +GI+V D + Y + +
Sbjct: 182 IADCVEALIGAYLISCGNRGALLFMSWLGIRVLNTLDDSKLGYLKPPSSSILHNINDSEG 241
Query: 600 QAERLVN-VRHLESLLNYSFRDPSLLVEALT 629
+ +L++ E L Y F+D S L++A+T
Sbjct: 242 ELTKLMDGFESFEQHLGYCFQDRSYLLQAMT 272
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS+L++ALT + +RLE +GD+ L Y +T YLY + + G L+D+RS
Sbjct: 64 PSILLQALTTSN---ANDGINLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNH 120
Query: 681 VNN-DCYALSSVKHGLHKHILHASQELYKWIN---ITVDSFERLSLESTFGWESETSFPK 736
V+N + Y L +K + I + W+ I E+ + S K
Sbjct: 121 VSNLNLYRLGKLKMFGERMISTKFEPRSNWLPPCFIEPHKLEKAVINSNISITQHIINDK 180
Query: 737 ALGDIIESLSGAIFVDSGCNKEVVFES 763
++ D +E+L GA + G ++F S
Sbjct: 181 SIADCVEALIGAYLISCGNRGALLFMS 207
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 174/435 (40%), Gaps = 95/435 (21%)
Query: 11 FIQSRGRARMQNSDYLLMLK--------RYFKPTPKFDINKEMGI--CTLYLPNNCPIQT 60
F+ S G + +S L+ + +YF P P F G+ C L LP N QT
Sbjct: 1582 FVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQT 1641
Query: 61 VIAQGNIKT--LKQTACLEACKKLHQIGALTDNLLP--------DVVVEEHDA------- 103
+I GN + KQ CLEACKKLHQ+GAL D+LLP D++V+ +
Sbjct: 1642 IIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTT 1701
Query: 104 ---QKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLI-ELKQNFNYDIPAHDIVLAV 159
+ HG A + ++ Q KI + C ++ EL F VL +
Sbjct: 1702 KRKELHGTTQTCALSGTW-GDKIDGAIFQAYKIDFSCNIVNELYSGF---------VLLI 1751
Query: 160 RTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDK 219
++L+ ++ + +L + + ++ G++ L ++V+ F F +
Sbjct: 1752 ESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMXFHELFFNSLFGRLFIG 1811
Query: 220 -----------LNEILKGLWLRDNLEIDYLLLPA------SEQS--IDWEPVASLS---- 256
LN K LW N+ YLLLP S++S I+W + S +
Sbjct: 1812 SKSSGVRREFLLNTQQKSLWSSSNM---YLLLPIESSNIPSDESWRINWPGINSCASVVE 1868
Query: 257 --------------------FPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVC 296
PC GL + C ++S V + + + N VV
Sbjct: 1869 FLEKRSQLSTGNMNDDTGNPSPCSTGLVETE-CKSIS---TVHLANNSVHVNNLKNMVVL 1924
Query: 297 TPHSGQIYYITGVLGHLNANSLFTR----NDGGAITYKKHYEERYGIQLCFDQELLLNGR 352
H+G+IY I V+ +A S F N T+ +++ +YGI L + + LL +
Sbjct: 1925 AIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLK 1984
Query: 353 RIFHAQNYLSKCRQE 367
+ +A N L E
Sbjct: 1985 QSHNAHNLLVNFNDE 1999
>gi|242092492|ref|XP_002436736.1| hypothetical protein SORBIDRAFT_10g007863 [Sorghum bicolor]
gi|241914959|gb|EER88103.1| hypothetical protein SORBIDRAFT_10g007863 [Sorghum bicolor]
Length = 140
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Query: 198 VLLCRRFQIALFRVIMDHNLDKLNEILKGLW-LRDNLEIDYLLLPASEQSIDW----EPV 252
V++ RRFQ + +++ ++L +++ K L ++ + YLLLP IDW
Sbjct: 1 VIVDRRFQTTILSLLISNDLLEVSNSFKRLLEMQVSPGAVYLLLPVVSGKIDWCNTKFSA 60
Query: 253 ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGH 312
+ + ++ ++H+ +C K GP C CM+ NSVV TPH+G Y ++G +
Sbjct: 61 SEMLEDINMDIRHNHSC-----------KGGPFCPCMLQNSVVYTPHNGSFYAVSG-FRY 108
Query: 313 LNANSLFTRNDGGAITYKKHYEERYGIQL 341
LNANSL R DG ++YK H++ER+GI L
Sbjct: 109 LNANSLMHRRDGSVLSYKTHFKERHGIDL 137
>gi|166155383|ref|YP_001653638.1| ribonuclease III [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|238687467|sp|B0BBS8.1|RNC_CHLTB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|165931371|emb|CAP06943.1| ribonuclease III [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|440526098|emb|CCP51582.1| ribonuclease III [Chlamydia trachomatis L2b/8200/07]
gi|440535923|emb|CCP61436.1| ribonuclease III [Chlamydia trachomatis L2b/795]
gi|440542151|emb|CCP67665.1| ribonuclease III [Chlamydia trachomatis L2b/UCH-2]
gi|440543042|emb|CCP68556.1| ribonuclease III [Chlamydia trachomatis L2b/Canada2]
gi|440543933|emb|CCP69447.1| ribonuclease III [Chlamydia trachomatis L2b/LST]
gi|440544823|emb|CCP70337.1| ribonuclease III [Chlamydia trachomatis L2b/Ams1]
gi|440545713|emb|CCP71227.1| ribonuclease III [Chlamydia trachomatis L2b/CV204]
gi|440913975|emb|CCP90392.1| ribonuclease III [Chlamydia trachomatis L2b/Ams2]
gi|440914865|emb|CCP91282.1| ribonuclease III [Chlamydia trachomatis L2b/Ams3]
gi|440915757|emb|CCP92174.1| ribonuclease III [Chlamydia trachomatis L2b/Canada1]
gi|440916651|emb|CCP93068.1| ribonuclease III [Chlamydia trachomatis L2b/Ams4]
gi|440917541|emb|CCP93958.1| ribonuclease III [Chlamydia trachomatis L2b/Ams5]
Length = 231
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHSSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P L+ G L+ R+A VN + + K L +H+L + E++
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVF------ESIRPLLEPMITP 774
+S A ++ E++ GA+++D G + ++++ ESI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLFEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 775 ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ RLQ + + K S K +G V+V NG L+ A + KE A+
Sbjct: 162 KN-RLQ---QFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGFAGSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|15605018|ref|NP_219802.1| ribonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76789019|ref|YP_328105.1| ribonuclease III [Chlamydia trachomatis A/HAR-13]
gi|237802720|ref|YP_002887914.1| ribonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|237804642|ref|YP_002888796.1| ribonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311099|ref|ZP_05353669.1| ribonuclease III [Chlamydia trachomatis 6276]
gi|255317400|ref|ZP_05358646.1| ribonuclease III [Chlamydia trachomatis 6276s]
gi|376282301|ref|YP_005156127.1| ribonuclease III [Chlamydia trachomatis A2497]
gi|385239809|ref|YP_005807651.1| ribonuclease III [Chlamydia trachomatis G/9768]
gi|385240731|ref|YP_005808572.1| ribonuclease III [Chlamydia trachomatis G/11222]
gi|385242585|ref|YP_005810424.1| ribonuclease III [Chlamydia trachomatis G/9301]
gi|385243503|ref|YP_005811349.1| Ribonuclease III [Chlamydia trachomatis D-EC]
gi|385244383|ref|YP_005812227.1| Ribonuclease III [Chlamydia trachomatis D-LC]
gi|385246195|ref|YP_005815017.1| ribonuclease III [Chlamydia trachomatis G/11074]
gi|385269975|ref|YP_005813135.1| Ribonuclease III [Chlamydia trachomatis A2497]
gi|7531193|sp|O84299.1|RNC_CHLTR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|90101618|sp|Q3KM65.1|RNC_CHLTA RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|3328712|gb|AAC67890.1| Ribonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76167549|gb|AAX50557.1| ribonuclease III [Chlamydia trachomatis A/HAR-13]
gi|231272942|emb|CAX09853.1| ribonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273954|emb|CAX10746.1| ribonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|296435814|gb|ADH17988.1| ribonuclease III [Chlamydia trachomatis G/9768]
gi|296436739|gb|ADH18909.1| ribonuclease III [Chlamydia trachomatis G/11222]
gi|296437674|gb|ADH19835.1| ribonuclease III [Chlamydia trachomatis G/11074]
gi|297140173|gb|ADH96931.1| ribonuclease III [Chlamydia trachomatis G/9301]
gi|297748426|gb|ADI50972.1| Ribonuclease III [Chlamydia trachomatis D-EC]
gi|297749306|gb|ADI51984.1| Ribonuclease III [Chlamydia trachomatis D-LC]
gi|347975115|gb|AEP35136.1| Ribonuclease III [Chlamydia trachomatis A2497]
gi|371908331|emb|CAX08959.1| ribonuclease III [Chlamydia trachomatis A2497]
gi|438690220|emb|CCP49477.1| ribonuclease III [Chlamydia trachomatis A/7249]
gi|438691304|emb|CCP48578.1| ribonuclease III [Chlamydia trachomatis A/5291]
gi|438692677|emb|CCP47679.1| ribonuclease III [Chlamydia trachomatis A/363]
gi|440525210|emb|CCP50461.1| ribonuclease III [Chlamydia trachomatis K/SotonK1]
gi|440527886|emb|CCP53370.1| ribonuclease III [Chlamydia trachomatis D/SotonD5]
gi|440528777|emb|CCP54261.1| ribonuclease III [Chlamydia trachomatis D/SotonD6]
gi|440532350|emb|CCP57860.1| ribonuclease III [Chlamydia trachomatis G/SotonG1]
gi|440533244|emb|CCP58754.1| ribonuclease III [Chlamydia trachomatis Ia/SotonIa1]
gi|440534138|emb|CCP59648.1| ribonuclease III [Chlamydia trachomatis Ia/SotonIa3]
Length = 231
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P L+ G L+ R+A VN + + K L +H+L + E++
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVF------ESIRPLLEPMITP 774
+S A +++E++ GA+++D G + ++++ ESI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLLEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 775 ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ RLQ + + K S K +G V+V NG L+ A + KE A+
Sbjct: 162 KN-RLQ---QFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGFAGSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|389815314|ref|ZP_10206660.1| ribonuclease 3 [Planococcus antarcticus DSM 14505]
gi|388466093|gb|EIM08402.1| ribonuclease 3 [Planococcus antarcticus DSM 14505]
Length = 251
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 37/200 (18%)
Query: 593 YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLG 649
Y++Q V+ L+ LN SF P+LL +A TH SY+ + + +RLEFLG
Sbjct: 9 YQKQSVVKESAKAAFEQLQKELNVSFNKPALLYQAFTHSSYVNEHRRKQFTDNERLEFLG 68
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
DAVL+ ++ YLY KYP +S G+LT +R+A V L + + G K+IL E
Sbjct: 69 DAVLELSVSHYLYMKYPEMSEGELTKLRAAIVCEPSLVLFANELGFGKYILLGKGE---- 124
Query: 710 INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
E T G + P L D+ ES GA+++D G LE
Sbjct: 125 -------------ELTGG----RTRPALLADVFESYIGALYLDQG-------------LE 154
Query: 770 PMITPETMRLQPARELNEYC 789
P++T M L P E+ +
Sbjct: 155 PVVTFLEMVLFPKVEIGAFS 174
>gi|255506876|ref|ZP_05382515.1| ribonuclease III [Chlamydia trachomatis D(s)2923]
gi|389857987|ref|YP_006360229.1| ribonuclease III [Chlamydia trachomatis F/SW4]
gi|389859739|ref|YP_006361979.1| ribonuclease III [Chlamydia trachomatis F/SW5]
gi|380249059|emb|CCE14350.1| ribonuclease III [Chlamydia trachomatis F/SW5]
gi|380249934|emb|CCE13461.1| ribonuclease III [Chlamydia trachomatis F/SW4]
gi|440526994|emb|CCP52478.1| ribonuclease III [Chlamydia trachomatis D/SotonD1]
gi|440531458|emb|CCP56968.1| ribonuclease III [Chlamydia trachomatis F/SotonF3]
Length = 231
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPKLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P L+ G L+ R+A VN + + K L +H+L + E++
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVF------ESIRPLLEPMITP 774
+S A ++ E++ GA+++D G + ++++ ESI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLFEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 775 ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ RLQ + + K S K +G V+V NG L+ A + KE A+
Sbjct: 162 KN-RLQ---QFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGFAGSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|257093153|ref|YP_003166794.1| Ribonuclease III [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257045677|gb|ACV34865.1| Ribonuclease III [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 223
Score = 87.4 bits (215), Expect = 3e-14, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 35/243 (14%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE L Y+FRD +LL ALTH SY P +RLEFLGDA+L+ +I L+ ++PTL
Sbjct: 6 LERGLGYTFRDRALLQTALTHRSYSSPH----NERLEFLGDAILNAVIARSLFERFPTLP 61
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-ESTFGW 728
GDL+ +R+ V D GLH+ L +++ F RL E G
Sbjct: 62 EGDLSRLRAQLVRQD---------GLHQQAL----------ALSLGDFLRLGEGEQKSGG 102
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT---PETMRLQPAREL 785
+ P L D +E+L GA+++D+G E E I L E M+ P L
Sbjct: 103 QQR---PSILADGLEALFGALWLDAGF--EAAGEVINRLYESMLKQLIPGQGTKDAKTRL 157
Query: 786 NEYCQKHHFSMKKTVAPRINGKAAV---TVEVHANGTLFKHTHADADKETAKKVASKEVL 842
EY Q ++ + G+A TV + + + +++ A+++A++ L
Sbjct: 158 QEYLQGRRLALPQYALTGAEGEAHAQHFTVTCVIDALRIRTEGSGSNRRAAEQIAAERAL 217
Query: 843 KSL 845
+L
Sbjct: 218 DTL 220
>gi|166154508|ref|YP_001654626.1| ribonuclease III [Chlamydia trachomatis 434/Bu]
gi|255348658|ref|ZP_05380665.1| ribonuclease III [Chlamydia trachomatis 70]
gi|255503198|ref|ZP_05381588.1| ribonuclease III [Chlamydia trachomatis 70s]
gi|301335768|ref|ZP_07224012.1| ribonuclease III [Chlamydia trachomatis L2tet1]
gi|339625959|ref|YP_004717438.1| ribonuclease III [Chlamydia trachomatis L2c]
gi|385241664|ref|YP_005809504.1| ribonuclease III [Chlamydia trachomatis E/11023]
gi|385245271|ref|YP_005814094.1| ribonuclease III [Chlamydia trachomatis E/150]
gi|386262648|ref|YP_005815927.1| ribonuclease III [Chlamydia trachomatis Sweden2]
gi|389858863|ref|YP_006361104.1| ribonuclease III [Chlamydia trachomatis E/SW3]
gi|238687367|sp|B0B7L3.1|RNC_CHLT2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|165930496|emb|CAP03989.1| ribonuclease III [Chlamydia trachomatis 434/Bu]
gi|289525336|emb|CBJ14812.1| ribonuclease III [Chlamydia trachomatis Sweden2]
gi|296434887|gb|ADH17065.1| ribonuclease III [Chlamydia trachomatis E/150]
gi|296438607|gb|ADH20760.1| ribonuclease III [Chlamydia trachomatis E/11023]
gi|339460721|gb|AEJ77224.1| ribonuclease III [Chlamydia trachomatis L2c]
gi|380250812|emb|CCE12572.1| ribonuclease III [Chlamydia trachomatis E/SW3]
gi|440529667|emb|CCP55151.1| ribonuclease III [Chlamydia trachomatis E/SotonE4]
gi|440530566|emb|CCP56050.1| ribonuclease III [Chlamydia trachomatis E/SotonE8]
gi|440535033|emb|CCP60543.1| ribonuclease III [Chlamydia trachomatis E/Bour]
gi|440536814|emb|CCP62328.1| ribonuclease III [Chlamydia trachomatis L1/440/LN]
gi|440537705|emb|CCP63219.1| ribonuclease III [Chlamydia trachomatis L1/1322/p2]
gi|440538595|emb|CCP64109.1| ribonuclease III [Chlamydia trachomatis L1/115]
gi|440539483|emb|CCP64997.1| ribonuclease III [Chlamydia trachomatis L1/224]
gi|440540374|emb|CCP65888.1| ribonuclease III [Chlamydia trachomatis L2/25667R]
gi|440541263|emb|CCP66777.1| ribonuclease III [Chlamydia trachomatis L3/404/LN]
Length = 231
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P L+ G L+ R+A VN + + K L +H+L + E++
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVF------ESIRPLLEPMITP 774
+S A ++ E++ GA+++D G + ++++ ESI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLFEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 775 ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ RLQ + + K S K +G V+V NG L+ A + KE A+
Sbjct: 162 KN-RLQ---QFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGFAGSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|336468520|gb|EGO56683.1| hypothetical protein NEUTE1DRAFT_123167 [Neurospora tetrasperma FGSC
2508]
Length = 1529
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 144/311 (46%), Gaps = 41/311 (13%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
+P+ ++ L+A +L L C+Q +P + A+ + + + E LE +GD+
Sbjct: 939 IPAFTRAVEMSLVAADLMYNRLG-CLQLDNLPL--ITTALISSGSRGPTNYERLEFIGDT 995
Query: 462 FLKY------AASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI----RT 511
LK+ +A NHHE LLS KD++++N LC+ D L +I +
Sbjct: 996 ILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYIIHSAAS 1055
Query: 512 EPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGR-KKVKSKTVADVVEALIGAFLSTG 570
+ + PK + D+ +E K + +++ SK VADVVE+LIGA G
Sbjct: 1056 KKWRPKF------------VEDY--LDEMKSPESAETRQMSSKMVADVVESLIGAAYMCG 1101
Query: 571 G-----ENVGLIFLDRIGIKVDFVNVPYERQ--FQVQAERLVNVRHLESL---LNYSFRD 620
G E V L+ + + + R F+ + + + LE L ++Y+F
Sbjct: 1102 GMSKALECVALLLPTPKSSQFKWQEISLSRAQLFEFAPKDAILSKQLEPLEKAMSYTFHK 1161
Query: 621 PSLLVEALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP--TLSPGDLTDMR 677
SLL+EA+TH S L CY+ LEFLGDA+LD ++ L + L+ D+ +
Sbjct: 1162 KSLLIEAMTHPSCAGLSTNESCYELLEFLGDAILDVIVVKRLMAETGPNELAHNDMHEHL 1221
Query: 678 SASVNNDCYAL 688
S+ V D A
Sbjct: 1222 SSVVTADIMAF 1232
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 639 PRCYQRLEFLGDAVLDYL--ITVYLYNKYPTLSPGD----LTDMRSASVNNDCYALSSVK 692
P Y+RLEF+GD +L + +T + + ++ P L+ + VNN +S
Sbjct: 983 PTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRD 1042
Query: 693 HGLHKHILHASQELYKWINITVDSF--ERLSLESTFGWESETSFPKALGDIIESLSGAIF 750
GL ++I+H++ KW V+ + E S ES E+ K + D++ESL GA +
Sbjct: 1043 FGLDEYIIHSAAS-KKWRPKFVEDYLDEMKSPESA---ETRQMSSKMVADVVESLIGAAY 1098
Query: 751 VDSGCNK 757
+ G +K
Sbjct: 1099 MCGGMSK 1105
>gi|15835187|ref|NP_296946.1| ribonuclease III [Chlamydia muridarum Nigg]
gi|270285359|ref|ZP_06194753.1| ribonuclease III [Chlamydia muridarum Nigg]
gi|270289375|ref|ZP_06195677.1| ribonuclease III [Chlamydia muridarum Weiss]
gi|301336756|ref|ZP_07224958.1| ribonuclease III [Chlamydia muridarum MopnTet14]
gi|13878715|sp|Q9PK97.1|RNC_CHLMU RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|7190609|gb|AAF39406.1| ribonuclease III [Chlamydia muridarum Nigg]
Length = 232
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 32/250 (12%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITV 659
+R VN++ +ES L ++F P LLV ALTH SY P +RLEFLGDAVL ++T
Sbjct: 2 QRTVNIQAVESKLKFTFSQPRLLVTALTHPSYRNEFPSDGEDSERLEFLGDAVLGLVVTE 61
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
+L+ +P+L+ G L+ RSA VN + + K L +H+L E
Sbjct: 62 HLFLLFPSLNEGLLSTTRSALVNAEACFNYTQKLSLGEHLLIGRGE-------------- 107
Query: 720 LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL--EPMITPETM 777
++S G S A ++ E++ GA+++D G + I PLL + I P M
Sbjct: 108 -KMQSHRGKIS------AYANLFEAILGAVYLDGGLAP--ARQIIVPLLPNKEAILP-LM 157
Query: 778 RLQPARELNEYCQKHHFSMKKTVA---PRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ P L ++ Q+ + +A +G V+V N L+ A + KE A+
Sbjct: 158 LVNPKNRLQQFTQQTLKVLPTYIALPWSSEDGTPGYHVQVFVNEKLWGEGFAGSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|406913885|gb|EKD53182.1| hypothetical protein ACD_61C00122G0015 [uncultured bacterium]
Length = 234
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 25/188 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
N+ L+ L+ Y F++ SLL ALTH S + P + Y+RLEFLGDA+L+ LI++YL+ K
Sbjct: 5 NLDPLQDLIGYHFKNESLLETALTHRSCLNQPGVSESYERLEFLGDAILEMLISIYLFEK 64
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
YP G LT RSA+V + + SV + + +I + E E
Sbjct: 65 YPDKMEGYLTAARSATVRTESLSEVSVHNRFNDYIRMSKGE-----------------EV 107
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN-KEVVFES-IRPLLEPMITPETMRLQPA 782
T G ++ + L D+IESL GA+++D G + + FES I P + +I ++ P
Sbjct: 108 TGGRQNLS----ILEDVIESLIGALYIDGGLDAAKNFFESFILPNAQGIIALNRLK-DPK 162
Query: 783 RELNEYCQ 790
L E Q
Sbjct: 163 SLLQEKVQ 170
>gi|291278588|ref|YP_003495423.1| ribonuclease III [Deferribacter desulfuricans SSM1]
gi|290753290|dbj|BAI79667.1| ribonuclease III [Deferribacter desulfuricans SSM1]
Length = 231
Score = 86.3 bits (212), Expect = 7e-14, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 25/191 (13%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITVYLY 662
+ N+ LE L+ Y F++ SLL+EALTH SY ++ R Y+RLEFLGD+VL ++T YL
Sbjct: 1 MSNIEELEELIGYRFKNKSLLLEALTHSSYAYEKKLKRNYERLEFLGDSVLQLIVTEYLV 60
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
KY G L+ RS V+ D + ++K L+ ++ E+
Sbjct: 61 IKYKEFKEGVLSKYRSFFVSEDIISEIALKIRLNDFLMLGKGEIV--------------- 105
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQ 780
+ G+ P L DI ESL GA+++D G N + +V + L++ I + + +
Sbjct: 106 --SGGYTK----PSILADIFESLLGAVYLDGGYNEARRIVLMLMSELMDEYIE-KGIIID 158
Query: 781 PARELNEYCQK 791
P EL + Q+
Sbjct: 159 PKTELQKITQQ 169
>gi|376002801|ref|ZP_09780623.1| Ribonuclease III [Arthrospira sp. PCC 8005]
gi|375328857|emb|CCE16376.1| Ribonuclease III [Arthrospira sp. PCC 8005]
Length = 394
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 116/257 (45%), Gaps = 52/257 (20%)
Query: 608 RHLESLLN-YSFRDPSLLVEALTHGSYML---PEIPRCYQRLEFLGDAVLDYLITVYLYN 663
R L LL F++ LL ALTH SY+ E+ R + LEFLGD+VL+++ YLYN
Sbjct: 163 RELSKLLKKIPFQNVDLLNHALTHSSYLYEHPKEVKRDNELLEFLGDSVLNFISGEYLYN 222
Query: 664 KYPTL-SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
KY ++ + GDLT +RSA V N A + K L ++I RL
Sbjct: 223 KYKSVRNEGDLTKLRSALVENKQLAKFAEKLALQQYI-------------------RLGK 263
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ-- 780
+ P L + E++ GA F+DSG K V E ++PL + +I T Q
Sbjct: 264 GAALN-------PSLLSNTFEAMIGAYFLDSGMKK--VQEFLQPLFDSVIAEITSLSQGN 314
Query: 781 -------PARELNEYCQKH-------HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHA 826
L E+ QK+ + ++K+ A K TV+V G ++
Sbjct: 315 SGKVAADSKNRLQEWVQKNIGPITPEYETIKEEGADH---KKQFTVQVMVQGKVYGEGKG 371
Query: 827 DADKETAKKVASKEVLK 843
+ KE +KK A K + K
Sbjct: 372 SSKKEASKKAAEKALGK 388
>gi|344995859|ref|YP_004798202.1| ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
gi|343964078|gb|AEM73225.1| Ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
Length = 222
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 26/170 (15%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L Y+F+D +LL ALTH S CY+RLEFLGDA L+ ++ YL+ +P
Sbjct: 1 MEEIERALGYTFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLFVHFP 59
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF-ERLSLEST 725
LS G+LT++R+A V + + + K L HI+ +E ++ F E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKRE-------KMEKFHENKSI--- 109
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMIT 773
L D++E++ GAIF++SG + ++++ ++P ++ +T
Sbjct: 110 ------------LADVLEAIFGAIFIESGFDIVEKIIVNLLKPYIQKAVT 147
>gi|321451362|gb|EFX63042.1| hypothetical protein DAPPUDRAFT_336024 [Daphnia pulex]
Length = 270
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
+L V+ E +LNYSF D +L+EALT+G+ + YQRLE +GDA +L + +
Sbjct: 96 QLSAVKAFEEILNYSFNDKEVLLEALTYGNSIRS---LNYQRLEVIGDAAFGFLAALNFF 152
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVD------- 715
+ S GD++ +RSA V ND + + + K H +I + L K + ++
Sbjct: 153 KQSLYHSAGDISQLRSACVCNDTFGMLAAKRNFHAYIQNLPPNLVKHLEDFLEFAESENF 212
Query: 716 -SFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
F+R E+ ++ + P L D+ E+++GA+ DS + FE++ + P +
Sbjct: 213 APFDRELAENEEIIATQVAIPTFLADVFEAVAGAVITDSNLS----FETLEKVFVPFM 266
>gi|313224789|emb|CBY20581.1| unnamed protein product [Oikopleura dioica]
Length = 538
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 67/347 (19%)
Query: 436 KVLEAITTKKCQEG--FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISN 493
KV+ + T + +E +LE E LGD+ L + S +F + N EG LS+ + ++ N
Sbjct: 51 KVMALLGTSEPKESPINYLERPEFLGDAVLGFVVSVSIFHLFPNLGEGALSMLRCALVCN 110
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
L L L + +++ D + +LN+
Sbjct: 111 VHLAALAQKLTLEDYF--------VYIHSQDLAKREDLNN-------------------- 142
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRI--------GIKVDFVNVPYERQF------QV 599
+A+ EA++GA GG L R+ + +DF P ++++ Q+
Sbjct: 143 ALANCFEAVLGAIYMDGGLEPVRQLLARVLFDDKALQRVWLDFPAHPLQQEYPDGDRAQI 202
Query: 600 QAERLVN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY-QRLEFLGDAVLDYLI 657
++ +++ LE LL F++ LL +ALT + +I + + QRLEFLGDA+ ++L
Sbjct: 203 ESSKVLKRCAELEELLGVKFKNIRLLAKALTLKNVKYNDITKGHNQRLEFLGDAICNFLA 262
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
YL+ +P G LT +R V AL + + GL K ++ S
Sbjct: 263 AEYLFKHFPLHHEGHLTLLRCTMVGAPTQALVAQQIGLDKFVI---------------SR 307
Query: 718 ERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI 764
+ LS GW+ K L D++ES GA+F+D G VF +
Sbjct: 308 QSLS-HDKMGWKQ-----KILADLMESFIGALFIDRGIIAVDVFMKV 348
>gi|302872013|ref|YP_003840649.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
gi|302574872|gb|ADL42663.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
Length = 222
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 26/167 (15%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L Y F D +LL ALTH S CY+RLEFLGDA L+ ++ YLY +P
Sbjct: 1 MEEIEKALGYKFEDKNLLKLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLYVYFP 59
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF-ERLSLEST 725
LS G+LT++R+A V + + + K L HI+ +E ++ F E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKRE-------KMEKFHENKSI--- 109
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
L D++E+L GAIF++SG + V + I LL+P I
Sbjct: 110 ------------LADVLEALFGAIFIESGFD--TVEKIIVNLLKPYI 142
>gi|410460645|ref|ZP_11314319.1| ribonuclease III [Bacillus azotoformans LMG 9581]
gi|409926699|gb|EKN63853.1| ribonuclease III [Bacillus azotoformans LMG 9581]
Length = 247
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 42/266 (15%)
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGD 650
+R+ ++ ++ + + L+ LLN F + LLV+A TH SY+ + + RLEFLGD
Sbjct: 7 KREKKIGIKQKLKFQELQDLLNIQFENEHLLVQAFTHSSYVNEHRIKSSEDNERLEFLGD 66
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSA-----SVNNDCYALSSVKHGLHKHILHASQE 705
AVL+ ++ YL+N YP++S GDLT +R+A S+ N + LS +++L E
Sbjct: 67 AVLELTVSHYLFNNYPSMSEGDLTKLRAAIVCEPSLVNFAHQLS-----FGEYVLLGKGE 121
Query: 706 LYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIR 765
E T G + P L D+ ES GA+++D G +K V E ++
Sbjct: 122 -----------------ELTGG----RARPALLADVFESFIGALYLDQGLDK--VIEFLQ 158
Query: 766 PLLEPMITPETMR--LQPARELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTL 820
++ P I+ + +L E Q++ + + + G A V NG +
Sbjct: 159 KVIYPKISEGVFSHVMDYKSQLQEIVQRNGQGSLEYLIIQEKGPAHNREFVSRVALNGEI 218
Query: 821 FKHTHADADKETAKKVASKEVLKSLK 846
T K+ A++ A+KE L LK
Sbjct: 219 LG-TGVGKSKKEAEQKAAKEALDELK 243
>gi|188593372|emb|CAP07635.1| drosha protein [Oikopleura dioica]
Length = 1096
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 67/347 (19%)
Query: 436 KVLEAITTKKCQEG--FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISN 493
KV+ + T + +E +LE E LGD+ L + S +F + N EG LS+ + ++ N
Sbjct: 609 KVMALLGTSEPKESPINYLERPEFLGDAVLGFVVSVSIFHLFPNLGEGALSMLRCALVCN 668
Query: 494 AALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSK 553
L L L + +++ D + +LN+
Sbjct: 669 VHLAALAQKLTLEDYF--------VYIHSQDLAKREDLNN-------------------- 700
Query: 554 TVADVVEALIGAFLSTGGENVGLIFLDRI--------GIKVDFVNVPYERQF------QV 599
+A+ EA++GA GG L R+ + +DF P ++++ Q+
Sbjct: 701 ALANCFEAVLGAIYMDGGLEPVRQLLARVLFDDKALQRVWLDFPAHPLQQEYPDGDRAQI 760
Query: 600 QAERLVN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY-QRLEFLGDAVLDYLI 657
++ +++ LE LL F++ LL +ALT + +I + + QRLEFLGDA+ ++L
Sbjct: 761 ESSKVLKRCAELEELLGVKFKNIRLLAKALTLKNVKYNDITKGHNQRLEFLGDAICNFLA 820
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
YL+ +P G LT +R V AL + + GL K ++ S
Sbjct: 821 AEYLFKHFPLHHEGHLTLLRCTMVGAPTQALVAQQIGLDKFVI---------------SR 865
Query: 718 ERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESI 764
+ LS GW+ K L D++ES GA+F+D G VF +
Sbjct: 866 QSLS-HDKMGWKQ-----KILADLMESFIGALFIDRGIIAVDVFMKV 906
>gi|152993835|ref|YP_001359556.1| ribonuclease III [Sulfurovum sp. NBC37-1]
gi|189043369|sp|A6QCJ0.1|RNC_SULNB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|151425696|dbj|BAF73199.1| ribonuclease III [Sulfurovum sp. NBC37-1]
Length = 223
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 38/237 (16%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE LNY+F+D L++EALTH SY + P +RLEFLGDAVLD ++ YL+ K+P
Sbjct: 6 QLEKRLNYTFKDKQLIIEALTHKSY---KKPYNNERLEFLGDAVLDLIVGEYLFKKFPKS 62
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
G L+ +R++ VN + L + K L +I + L+ E+ G
Sbjct: 63 DEGILSKIRASLVNESGFTLLARKIDLGSYI-----------------YLSLAEENNNGR 105
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLE--PMITPETMRLQPARE 784
+ P L + E++ GA+++++G + KE+ SI+ L E P I +++
Sbjct: 106 DK----PSLLSNAFEAIIGAVYLEAGLDTAKEI---SIKLLEECHPKIDLQSLSKDYKTA 158
Query: 785 LNEYCQKHH-----FSMKKTVAP--RINGKAAVTVEVHANGTLFKHTHADADKETAK 834
L E Q H + M + P + + AVT++ T + DA ++ AK
Sbjct: 159 LQELTQATHAVTPGYEMLGSSGPDHKKEFEIAVTLDNKTIATAKGKSKKDAQQKAAK 215
>gi|222529151|ref|YP_002573033.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
gi|222455998|gb|ACM60260.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
Length = 222
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 31/241 (12%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L Y F D +LL ALTH S CY+RLEFLGDA L+ +++ YL+ +P
Sbjct: 1 MEEIEKALGYKFMDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELVVSKYLFVHFP 59
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF-ERLSLEST 725
LS G+LT++R+A V + + + K L HI+ +E ++ F E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGKRE-------KMEKFHENKSI--- 109
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
L D++E++ GAIF++SG K +++ ++P ++ + + +
Sbjct: 110 ------------LTDVVEAIFGAIFIESGFEKLEKIIVNLLKPYIQKAVAGKLFYDYKTK 157
Query: 784 ELNEYCQKHHFSMKKTVAP--RINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEV 841
L E+ QK KK V I K E+ G + + KE + A K +
Sbjct: 158 -LQEFVQKK--GQKKIVYKDYEIIEKKYFKSELFIEGKKVSEGYGTSKKEAQQDAAYKFL 214
Query: 842 L 842
L
Sbjct: 215 L 215
>gi|320161647|ref|YP_004174872.1| ribonuclease III [Anaerolinea thermophila UNI-1]
gi|319995501|dbj|BAJ64272.1| ribonuclease III [Anaerolinea thermophila UNI-1]
Length = 237
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 614 LNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
L SF+ LL ALTH SY+ PE +RLEFLGDAVLD+++ +LYN+YP + G
Sbjct: 17 LGLSFKSFFLLSRALTHRSYLNEHPEAIEDNERLEFLGDAVLDFVVGAWLYNRYPDMPEG 76
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE 731
DLT MRS +L ++++L ++ VD L L
Sbjct: 77 DLTRMRS--------------------VLVSTEQLSEFAR-KVDLGRALRLGKGETQAGG 115
Query: 732 TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI---TPETMRLQ----PARE 784
P L D E++ GAI++DSG E +R +EPM+ E + Q P
Sbjct: 116 RDRPALLCDAFEAVIGAIYLDSG------IEGVRRFIEPMLEKAADEILARQTIEDPKSM 169
Query: 785 LNEYCQKHHFSMKKTVAPRING---KAAVTVEVHANGTLF 821
L E+ Q F + + +G V+V NG ++
Sbjct: 170 LQEWAQGQGFQAPRYIVRSSSGPEHSKQFEVDVLINGQIY 209
>gi|152989964|ref|YP_001355686.1| ribonuclease III [Nitratiruptor sp. SB155-2]
gi|189043328|sp|A6Q1H0.1|RNC_NITSB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|151421825|dbj|BAF69329.1| ribonuclease III [Nitratiruptor sp. SB155-2]
Length = 226
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 29/191 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ E L YSF D LL EALTH SY + P +RLEFLGDAVLD ++ YL+ K+
Sbjct: 3 QLEEFEKKLGYSFEDKKLLKEALTHKSY---KSPVNNERLEFLGDAVLDLVVGEYLFKKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P + G+L+ +R++ VN + +A + K + K+I + E E+
Sbjct: 60 PKANEGELSKLRASLVNEEGFAKLAQKLDIGKYIFISQAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE---PMITPETMRLQPA 782
G + P L + E++ GAI+++ G K V E LLE P I +++
Sbjct: 103 QG----RTKPSLLSNAFEAVMGAIYLEKGLEK--VRELSLKLLEEAYPKIDLDSLFKDFK 156
Query: 783 RELNEYCQKHH 793
L E+ Q H+
Sbjct: 157 TALQEFTQAHY 167
>gi|376336566|gb|AFB32888.1| hypothetical protein 0_6448_02, partial [Abies alba]
Length = 150
Score = 84.3 bits (207), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PK LGDI+ES++GAIF+D + V+E +PLL+PM+TPET+ + P REL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTTKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ A R A TVEV+ +G + K+ A+K+A++ L LK
Sbjct: 71 GLEYK-ASRTGNMA--TVEVYVDGVQIGFAQ-NPQKKMAQKLAARNALVILK 118
>gi|321456672|gb|EFX67773.1| hypothetical protein DAPPUDRAFT_115150 [Daphnia pulex]
Length = 228
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 38/199 (19%)
Query: 598 QVQAERLVN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 656
+ E L N + +E + Y F++ LL++A+TH SY + Y E++GD VL +
Sbjct: 16 KAMVEFLFNGLEEVEKTIGYIFKNKLLLIQAMTHSSYKNNCLTESYNEQEWIGDRVLGFE 75
Query: 657 ITVYLYNKYPTLSPGDLTDMRSAS----VNNDCYALSSVKHGLHKHI------------- 699
+ K+ +L+ D D +SA+ +N+ +A+ +V+HG+HKHI
Sbjct: 76 MA-----KFVSLNCQDTVDAKSATFATLTSNEFWAVLTVRHGIHKHIKLCDNNLTAKIDA 130
Query: 700 ------LHASQELYKWINI--TVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFV 751
+ Q ++K+ I +VD E L +TF T PK L D+ E+L+GAIF
Sbjct: 131 FAEQQTRNGHQHMHKFFEIVESVDDPELLF--ATF-----TEPPKELADVWEALAGAIFQ 183
Query: 752 DSGCNKEVVFESIRPLLEP 770
DSG + ++ + I PLL P
Sbjct: 184 DSGFSNDITWAVIAPLLVP 202
>gi|409042283|gb|EKM51767.1| hypothetical protein PHACADRAFT_150441 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1556
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 48/293 (16%)
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FVNVP--YERQF---QVQA 601
+++ +K +ADVVE+LIGA GG ++ + + +D + VP E+ +
Sbjct: 1184 QELSTKMLADVVESLIGAAYEHGGFDLATECMQLFHLGIDTWETVPACVEKSLGHIEELG 1243
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
E + +E ++ Y F LLVEALTH SY + Y+RLEF+GDAVLD ++T +L
Sbjct: 1244 ELPPALELVERMVGYKFSKRVLLVEALTHASYTGVIETQSYERLEFIGDAVLDMIVTDFL 1303
Query: 662 YN-KYPTLSPGDLTDMRSASVNNDCYALS---------------SVKHG----------- 694
Y+ +PG + + A VN+ A + + + G
Sbjct: 1304 YHVPGKNYTPGHMHLRKEALVNSHLLAFACMNTHVDVDASMPAWNAQDGIVLDTATQRIP 1363
Query: 695 LHKHILHASQELYKWINITVDSFER--------LSLESTFGWESETSF--PKALGDIIES 744
L + +LH+S + +N+T +E+ L + + W + TS PK + D+ ES
Sbjct: 1364 LCRCLLHSSPRVLDDLNLTYARWEKHGAGIRRALEHDVIYPWAALTSLQAPKFVSDMFES 1423
Query: 745 LSGAIFVDS----GCNKEVVFE-SIRPLLEPMITPETMRLQPARELNEYCQKH 792
+ GAIF+DS G + V+ + I ++E ++ E L P L + K+
Sbjct: 1424 VLGAIFLDSHGDLGTVRAVLAKLGIVHIMERIVADEVDVLHPVSRLGIWAAKN 1476
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL 700
YQRLE LGD VL Y+++V L+ +YP G L + +VNN+ A +++ GL I+
Sbjct: 1026 SYQRLETLGDTVLKYIVSVLLHAQYPLWHEGYLARRKDHAVNNNRLAKEALRLGLQTWII 1085
Query: 701 HASQELYKW 709
KW
Sbjct: 1086 RDRFAAKKW 1094
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 401 FVPSIMHRLQSLLLAVN-LKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLG 459
+PS++ R S+ V+ ++ L + +IP + + A+T + + LETLG
Sbjct: 976 LLPSLL-RFASISATVHAVRITLFASSPRLASIPFTLLRPALTAPVATDLVSYQRLETLG 1034
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
D+ LKY S L Y HEG L+ +KD ++N L K L +I + F K W
Sbjct: 1035 DTVLKYIVSVLLHAQYPLWHEGYLARRKDHAVNNNRLAKEALRLGLQTWIIRDRFAAKKW 1094
>gi|237752001|ref|ZP_04582481.1| ribonuclease III [Helicobacter winghamensis ATCC BAA-430]
gi|229376568|gb|EEO26659.1| ribonuclease III [Helicobacter winghamensis ATCC BAA-430]
Length = 223
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 24/153 (15%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
+VN++H E L Y F+ +LL EALTH S + +RLEFLGDAVLD +I +LYN
Sbjct: 1 MVNLKHFEKTLGYHFKAQNLLKEALTHKS---AKKGTHNERLEFLGDAVLDLIIGEFLYN 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+P G+L+ MR++ VN +A ++ +++NI F S E
Sbjct: 58 KFPNSREGELSKMRASMVNEKAFA-----------------KIARYLNIGEYLFISNSEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
G + ++ L + E++ GAI+++SG +
Sbjct: 101 QNNGRKKDS----ILSNAFEAVIGAIYLESGLD 129
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EA+T K ++G H E LE LGD+ L + L+ + N EG LS + +++ A K
Sbjct: 23 EALTHKSAKKGTHNERLEFLGDAVLDLIIGEFLYNKFPNSREGELSKMRASMVNEKAFAK 82
Query: 499 LG 500
+
Sbjct: 83 IA 84
>gi|164424566|ref|XP_963538.2| hypothetical protein NCU06766 [Neurospora crassa OR74A]
gi|157070568|gb|EAA34302.2| predicted protein [Neurospora crassa OR74A]
Length = 1421
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 148/349 (42%), Gaps = 82/349 (23%)
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI----RTEPFDPKMWMIPGDNSGSYELN 532
NHHE LLS KD++++N LC+ D L +I ++ + PK +
Sbjct: 909 NHHERLLSQWKDKLVNNVRLCRASRDFGLDEYIINSAASKKWRPKF------------VE 956
Query: 533 DHSLFNERKIYVTGR-KKVKSKTVADVVEALIGAFLSTGG-----ENVGLIFLDRIGIKV 586
D+ +E K ++ +++ SK VADVVE+LIGA GG E V L+ +
Sbjct: 957 DY--MDEMKSPISAETRQMSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQF 1014
Query: 587 DFVNVPYERQ--FQVQAERLVNVRHLESL---LNYSFRDPSLLVEALTHGSYM-LPEIPR 640
+ + R F+ + + + LE L ++Y+F SLL+EA+TH S L
Sbjct: 1015 KWQEIELSRTQLFEFAPKDAILSKQLEPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNES 1074
Query: 641 CYQRLEFLGDAVLDYLITVYLYNKYP--TLSPGDLTDMRSASVNNDCYALSSVKH----- 693
CY+RLEFLGDA+LD ++ L + L+ D+ + S+ V D A +++
Sbjct: 1075 CYERLEFLGDAILDVIVVKRLMAETGPNELAHNDMHEHLSSVVTADIMAFLAMEWVIMQT 1134
Query: 694 -------------GL----------------------HKHILHASQELYKWINITVDSFE 718
GL + + H S ++ T++ +
Sbjct: 1135 DINEIDPTNLDALGLLPSSQSRITPASLVSNKEDWPFWRFMRHNSPQVGATQTATIERYL 1194
Query: 719 RLSLESTFGWESETSFPKAL----------GDIIESLSGAIFVDSGCNK 757
L E + P AL DI+ESL GA++VDSG K
Sbjct: 1195 TLRDEIRDAIWKHNTLPWALLARMGPQKFYSDIVESLIGAVWVDSGSWK 1243
>gi|376336574|gb|AFB32892.1| hypothetical protein 0_6448_02, partial [Pinus cembra]
gi|376336576|gb|AFB32893.1| hypothetical protein 0_6448_02, partial [Pinus cembra]
Length = 150
Score = 83.2 bits (204), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PK LGDI+ES++GAIF+D + V+E +PLL+PM+TPET+ + P REL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTTKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ A R A TVEV +G + K+ A+K+A++ L LK
Sbjct: 71 GLEYK-ASRTGNMA--TVEVFVDGVQIGFAQ-NPQKKMAQKLAARNALVILK 118
>gi|376336568|gb|AFB32889.1| hypothetical protein 0_6448_02, partial [Larix decidua]
gi|376336570|gb|AFB32890.1| hypothetical protein 0_6448_02, partial [Larix decidua]
gi|376336572|gb|AFB32891.1| hypothetical protein 0_6448_02, partial [Larix decidua]
Length = 150
Score = 83.2 bits (204), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PK LGDI+ES++GAIF+D + V+E +PLL+PM+TPET+ + P REL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ A R A TVEV +G + K+ A+K+A++ L LK
Sbjct: 71 GLEYK-ASRTGNMA--TVEVFVDGVQIGFAQ-NPQKKMAQKLAARNALVILK 118
>gi|361066575|gb|AEW07599.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|376336578|gb|AFB32894.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
gi|376336580|gb|AFB32895.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
gi|376336582|gb|AFB32896.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
gi|383164825|gb|AFG65201.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164826|gb|AFG65202.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164827|gb|AFG65203.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164828|gb|AFG65204.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164830|gb|AFG65205.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164831|gb|AFG65206.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164832|gb|AFG65207.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164833|gb|AFG65208.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164834|gb|AFG65209.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164835|gb|AFG65210.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164836|gb|AFG65211.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164837|gb|AFG65212.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164838|gb|AFG65213.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164839|gb|AFG65214.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164840|gb|AFG65215.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164841|gb|AFG65216.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
Length = 150
Score = 83.2 bits (204), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PK LGDI+ES++GAIF+D + V+E +PLL+PM+TPET+ + P REL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ A R A TVEV +G + K+ A+K+A++ L LK
Sbjct: 71 GLEYK-ASRTGNMA--TVEVFVDGVQIGFAQ-NPQKKMAQKLAARNALVILK 118
>gi|361066573|gb|AEW07598.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
Length = 150
Score = 83.2 bits (204), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHF 794
PK LGDI+ES++GAIF+D + V+E +PLL+PM+TPET+ + P REL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 795 SMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
++ A R A TVEV +G + K+ A+K+A++ L LK
Sbjct: 71 GLEYK-ASRTGNMA--TVEVFVDGVQIGFAQ-NPQKKMAQKLAARNALVILK 118
>gi|378734261|gb|EHY60720.1| hypothetical protein HMPREF1120_08668 [Exophiala dermatitidis
NIH/UT8656]
Length = 1469
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 42/309 (13%)
Query: 379 LPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL-LAVNLKNMLLDHCMQNVTIPTSKV 437
LP + C ++ P+ + VPSI H L+ L A + L + ++ + V
Sbjct: 889 LPVDQCVLLGVPVDYARL--MLLVPSITHMLEVCLRTAAACQGPLAGLPLVDMDL----V 942
Query: 438 LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALC 497
EA+T + + E LE LGD LK+ S Q F + E L++ ++RI++NA L
Sbjct: 943 SEALTLPRVGPR-NYERLEFLGDDLLKFYTSIQGFVDNPTYPESGLTIARNRIVNNARLQ 1001
Query: 498 KLGCDHKLPGFIRTEPFDPKMW---MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKT 554
+ L F+ F W + D G + D E + + SKT
Sbjct: 1002 RATRTLALEQFLTQHRFSGAEWTAGVSKEDREGHGDSTDTVAHGE-------KTHLSSKT 1054
Query: 555 VADVVEALIGAF------LSTGGENV------GLI-----FLDRI---GIKVDFVNVPYE 594
+ADV+EALIGA +T G+N+ G+I FL+ + + + V +
Sbjct: 1055 LADVIEALIGAASLNGSTTTTNGDNIESRSQEGVIAALRLFLEEVPWRPVSENLVRIHVM 1114
Query: 595 RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 654
++ +L +ESL+ Y F +LL EALT S++ ++ Y RLEFLGDAVLD
Sbjct: 1115 DDSEITGYQLYA--PVESLIGYRFTRHALLAEALTQ-SWLGGQV-SSYDRLEFLGDAVLD 1170
Query: 655 YLITVYLYN 663
+++ L++
Sbjct: 1171 HIVKQALFH 1179
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Query: 620 DPSLLVEALTHGSYMLPEI-PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
D L+ EALT LP + PR Y+RLEFLGD +L + ++ + PT LT R+
Sbjct: 938 DMDLVSEALT-----LPRVGPRNYERLEFLGDDLLKFYTSIQGFVDNPTYPESGLTIARN 992
Query: 679 ASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL----SLESTFGWESETSF 734
VNN ++ L + + +W V +R S ++ E
Sbjct: 993 RIVNNARLQRATRTLALEQFLTQHRFSGAEW-TAGVSKEDREGHGDSTDTVAHGEKTHLS 1051
Query: 735 PKALGDIIESLSGA 748
K L D+IE+L GA
Sbjct: 1052 SKTLADVIEALIGA 1065
>gi|373857288|ref|ZP_09600030.1| ribonuclease III [Bacillus sp. 1NLA3E]
gi|372452938|gb|EHP26407.1| ribonuclease III [Bacillus sp. 1NLA3E]
Length = 260
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 26/183 (14%)
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGD 650
ER+ ++ + + + +S L + F+D +LL +A TH SY+ + Y+ RLEFLGD
Sbjct: 7 EREIKLNRAKEMQFKEFQSRLGFEFQDSNLLKQAFTHSSYVNEHRKKPYEDNERLEFLGD 66
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVL+ ++ +LY KYP +S G+LT +R+A V C ++ + EL+
Sbjct: 67 AVLELTVSQFLYKKYPLMSEGELTKLRAAVV---C----------EPSLVFFANELFFGQ 113
Query: 711 NITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
+ + E L+ + P L D+ E+ GA+++D G + VV E + ++ P
Sbjct: 114 LVLLGKGEELT--------GGRARPALLADVFEAFIGALYLDKGID--VVIEFLEKIVFP 163
Query: 771 MIT 773
I
Sbjct: 164 KIN 166
>gi|110834492|ref|YP_693351.1| ribonuclease III [Alcanivorax borkumensis SK2]
gi|123345468|sp|Q0VP19.1|RNC_ALCBS RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|110647603|emb|CAL17079.1| ribonuclease III [Alcanivorax borkumensis SK2]
Length = 228
Score = 82.8 bits (203), Expect = 7e-13, Method: Composition-based stats.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
++ L + L Y F+D SLL ALTH S R Y+RLEFLGDA L +I+V L+ ++
Sbjct: 4 DLNRLMARLGYQFQDLSLLELALTHRSV---SRHRNYERLEFLGDAQLGQIISVALFEQF 60
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P + G LT MR++ V AL + + GL ++++ EL F R S+
Sbjct: 61 PEAAEGQLTRMRASLVRGQTLALVARELGLGEYLVLGGGELKS------GGFRRDSI--- 111
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG---CNKEVVFESIRPLLEPMITPETMRLQPA 782
L D +ES+ GA+ +D G C +EVV P L+ I+P++ +
Sbjct: 112 ------------LADALESIIGAMLLDGGEPRC-REVVLAWFAPRLDA-ISPQSAQKDAK 157
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA 808
L E+ Q F + ++ G A
Sbjct: 158 TRLQEWLQARKFELPTYEVTQVEGLA 183
>gi|312622598|ref|YP_004024211.1| ribonuclease iii [Caldicellulosiruptor kronotskyensis 2002]
gi|312203065|gb|ADQ46392.1| ribonuclease III [Caldicellulosiruptor kronotskyensis 2002]
Length = 222
Score = 82.8 bits (203), Expect = 8e-13, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 29/241 (12%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L Y F+D +LL ALTH S CY+RLEFLGDA L+ ++ YL+ +P
Sbjct: 1 MEEIEKALGYKFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLFVHFP 59
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
LS G+LT++R+A V + + + K L HI+ +E E+ +
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGKRE----------KMEKFHENKSI 109
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPARE 784
L D++E++ GAIF++SG K +++ ++P ++ + + + +
Sbjct: 110 -----------LADVVEAIFGAIFIESGFEKLEKIIVNLLKPYIQKAVAGK-LFYDYKTK 157
Query: 785 LNEYCQKHHFSMKKTVAP--RINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
L E+ QK KK V I K E+ G + + KE + A K +L
Sbjct: 158 LQEFVQKE--GQKKIVYKDYEIIEKKYFKSELFIEGKKVSEGYGTSKKEAQQDAAYKFLL 215
Query: 843 K 843
+
Sbjct: 216 E 216
>gi|323489554|ref|ZP_08094781.1| ribonuclease 3 [Planococcus donghaensis MPA1U2]
gi|323396685|gb|EGA89504.1| ribonuclease 3 [Planococcus donghaensis MPA1U2]
Length = 251
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 79/156 (50%), Gaps = 24/156 (15%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLYNKY 665
L+ LN +F+ P+LL +A TH SY+ + + +RLEFLGDAVL+ ++ YLY KY
Sbjct: 25 QLQKELNITFKKPTLLYQAFTHSSYVNEHRRKQFTDNERLEFLGDAVLELSVSHYLYMKY 84
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P +S G+LT +R+A V L + + G K+IL E E T
Sbjct: 85 PEMSEGELTKLRAAIVCEPSLVLFANELGFGKYILLGKGE-----------------ELT 127
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
G + P L D+ ES GA+++D G V F
Sbjct: 128 GG----RTRPALLADVFESYIGALYLDQGLEPVVSF 159
>gi|145506903|ref|XP_001439412.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830350|emb|CAI39053.1| Ribonuclease with two RNaseIII domains [Paramecium tetraurelia]
gi|124406596|emb|CAK72015.1| unnamed protein product [Paramecium tetraurelia]
Length = 632
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 132/329 (40%), Gaps = 73/329 (22%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
V EAI T + E+LE LGDS LKY + +F+ Y+ EG ++ + R+I N L
Sbjct: 344 VEEAIVTSSSNFKRNYENLELLGDSVLKYVVTVDIFRQYELLDEGEMTSLRSRLIMNTFL 403
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+L L +I + K P N + + K+++ A
Sbjct: 404 AQLFEQLGLQHYIINQDLHFKQIRNPLVND---------------MISSDNKQLQISQKA 448
Query: 557 DVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFV-NVPYERQFQVQAERLVNVRHLESLL 614
D+ EA++G F T +I L R + F ++ ++ F+ E H+E +
Sbjct: 449 DIYEAIVGGVFEVTQSLYEYIIILRRTNFPISFYQDILFD--FEPITEY---TEHIE-IR 502
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY---------NKY 665
+Y F +P L A+ P Y RLEFLGDA ++ L+ Y++ N
Sbjct: 503 DYKFNNPQLFEIAIN---------PLQYDRLEFLGDAAIELLVISYIFRAAREKQQRNPN 553
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
L+PG L+ + + N +++ GL HI
Sbjct: 554 WILNPGLLSTWKQQLLGNKFMGEQTIRMGLKPHI-------------------------- 587
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
PK GDI ES++ AI +DSG
Sbjct: 588 ------NEIPKLYGDIFESVAAAILLDSG 610
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+ES+LNY ++ EA+ S R Y+ LE LGD+VL Y++TV ++ +Y L
Sbjct: 335 VESILNYQ-----VVEEAIVTSS---SNFKRNYENLELLGDSVLKYVVTVDIFRQYELLD 386
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
G++T +RS + N A + GL +I++
Sbjct: 387 EGEMTSLRSRLIMNTFLAQLFEQLGLQHYIIN 418
>gi|312127786|ref|YP_003992660.1| ribonuclease iii [Caldicellulosiruptor hydrothermalis 108]
gi|311777805|gb|ADQ07291.1| ribonuclease III [Caldicellulosiruptor hydrothermalis 108]
Length = 222
Score = 82.4 bits (202), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 24/168 (14%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L Y F+D +LL ALTH S CY+RLEFLGDA L+ +++ YL+ +P
Sbjct: 1 MEEIEKALGYKFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELVVSKYLFVNFP 59
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
LS G+LT++R+A V + + + K L HI+ +E E+ +
Sbjct: 60 DLSEGELTNIRAAVVCSQTLSEVAEKLNLKNHIIFGKRE----------KMEKFHENKSI 109
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMI 772
L D++E++ GAIF++SG +K +++ ++P ++ +
Sbjct: 110 -----------LADVLEAIFGAIFIESGFDKLEKIIVNLLKPYIQKAV 146
>gi|223944141|gb|ACN26154.1| unknown [Zea mays]
gi|414870637|tpg|DAA49194.1| TPA: hypothetical protein ZEAMMB73_470563 [Zea mays]
Length = 206
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 664
+V +E+LL Y F D SL+ ALTHGS+ P P Y+RLE+LGD VL L++ ++
Sbjct: 47 DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMSREVFRT 106
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
Y TL PG LT +R+A+V+ + A +V GLH+ + H + +L
Sbjct: 107 YRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLRHKAPKL 148
>gi|391332351|ref|XP_003740599.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1610
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFV-----NVPYERQFQ 598
+++ AD V+A+ G + G + L + +G++ DFV N+ R
Sbjct: 1242 RARVAADAVKAITGLAVDKCGPSGALRVMRWLGLEFGRSIDSPDFVDAFALNLDSLRVSD 1301
Query: 599 VQA---ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 655
A RL + +ES L Y F +L++EA+TH SY + + +L +G V++Y
Sbjct: 1302 SDAVILNRLHQIETVESRLRYRFEHKALVLEAITHHSYRGDSLTQSNVQLCSIGAVVIEY 1361
Query: 656 LITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV- 714
LI+ ++ + + +L ++R++ + +A K+GLHK++L+ +Q L+ I +
Sbjct: 1362 LISKFIASLPLDVESYNLFELRASICSAVNHAHIVAKNGLHKNLLYTNQSLFTVIRNYID 1421
Query: 715 --DSFERLSLESTFGWESETS----FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
D +E +S WES+ + P AL +++ +L GA+F+DSG N E+V+ L
Sbjct: 1422 CLDDYEPQPSKSLGDWESDDTDDDRVPLALAEMLMALVGAVFIDSGKNLEIVWSVYAELC 1481
Query: 769 EPMI--TPETMRLQPAREL 785
I + + P REL
Sbjct: 1482 GEQILRLANNIPISPIREL 1500
>gi|386285114|ref|ZP_10062332.1| ribonuclease III [Sulfurovum sp. AR]
gi|385343967|gb|EIF50685.1| ribonuclease III [Sulfurovum sp. AR]
Length = 223
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 45/251 (17%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE LNY+F++ L++EALTH SY + P +RLEFLGDAVLD ++ YL++K+P
Sbjct: 6 QLEERLNYTFKNKQLIIEALTHKSY---KKPYNNERLEFLGDAVLDLIVGEYLFSKFPNS 62
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ G L+ +R++ VN + L + K L +I + L+ E+ G
Sbjct: 63 NEGILSKIRASLVNESGFTLLARKLDLGSYI-----------------YLSLAEENNNGR 105
Query: 729 ESETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLE--PMITPETMRLQPARE 784
P L + E++ GAI++++G KE+ SI+ L E P I +++
Sbjct: 106 NK----PSLLSNAFEAIIGAIYLEAGLATAKEI---SIKLLEESHPKIDLDSLSKDYKTA 158
Query: 785 LNEYCQKHH-----FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADA---DKETAKKV 836
L E Q H +++ + P + + V TL T A A K+ A++
Sbjct: 159 LQELTQATHGVTPNYTLLDSSGPDHKKEFVIAV------TLDDKTIATAKGKSKKEAQQK 212
Query: 837 ASKEVLKSLKA 847
A++ LK LKA
Sbjct: 213 AAELALKELKA 223
>gi|261416404|ref|YP_003250087.1| ribonuclease III [Fibrobacter succinogenes subsp. succinogenes S85]
gi|385791265|ref|YP_005822388.1| ribonuclease III [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261372860|gb|ACX75605.1| ribonuclease III [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326232|gb|ADL25433.1| ribonuclease III [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 270
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 41/249 (16%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYML-PEIPRCY--QRLEFLGDAVLDYLITVYLYNKYP 666
LE+ L Y FRDP LL AL H S+++ ++P +RLEFLGD+VL+ L T +LY YP
Sbjct: 23 LEAKLGYRFRDPELLAHALVHRSFLVGKDVPYASNNERLEFLGDSVLNMLTTEFLYRTYP 82
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ G+L+ +SA V+ A SS +L +++ I E+
Sbjct: 83 SDPEGELSKRKSAIVSGHACAQSS-----------KEWDLSEYVKIGKS-------EAKM 124
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPA---- 782
G + S L D E++ GA+++D G E +R +L P + A
Sbjct: 125 GGRGKESI---LADAYEAVLGAVYLDGG------LEEVRAILNKFHFPRVQEIISATDFV 175
Query: 783 ---RELNEYCQKHHFSMKKTVAPRING---KAAVTVEVHANGTLFKHTHADADKETAKKV 836
EL E+CQ + V G + TVEV NG + +K+ A++
Sbjct: 176 NYKSELLEFCQGKLRCSPEYVIVGEEGPEHQKVFTVEVVVNGKSYARGQG-PNKKKAEQE 234
Query: 837 ASKEVLKSL 845
AS+ L++L
Sbjct: 235 ASRLSLETL 243
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 36/150 (24%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
E LE LGDS L ++ L++TY + EG LS +K I+S A +
Sbjct: 59 ERLEFLGDSVLNMLTTEFLYRTYPSDPEGELSKRKSAIVSGHACAQ-------------- 104
Query: 513 PFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGG 571
+S ++L+++ + + + GR K +AD EA++GA +L G
Sbjct: 105 ------------SSKEWDLSEYVKIGKSEAKMGGRG--KESILADAYEAVLGAVYLDGGL 150
Query: 572 ENVGLIF-------LDRIGIKVDFVNVPYE 594
E V I + I DFVN E
Sbjct: 151 EEVRAILNKFHFPRVQEIISATDFVNYKSE 180
>gi|422323120|ref|ZP_16404160.1| ribonuclease 3 [Achromobacter xylosoxidans C54]
gi|317401886|gb|EFV82493.1| ribonuclease 3 [Achromobacter xylosoxidans C54]
Length = 253
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 31/248 (12%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L++ F DP+LL +ALTH S+ R +RLEFLGD+VL++++ L+ +Y +
Sbjct: 6 LENRLDHHFGDPALLEQALTHRSHG----ARHNERLEFLGDSVLNFVVAAMLFERYSKID 61
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + L +++ EL F R
Sbjct: 62 EGDLSRLRANLVKQASLADIAQRLELSQYLRLGEGELKS------GGFRR---------- 105
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E+L GA+F+D+G + + V+ +P+L + P+T+ L E
Sbjct: 106 -----PSILADTVEALFGAVFLDAGFDAARRVIVRQYQPVLAS-VDPKTLGKDAKTLLQE 159
Query: 788 YCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
+ Q ++ +G A VE K A + A++ A+K L++
Sbjct: 160 FLQGRKLALPVYTVVATHGAAHSQQFEVECAIPALEIKVNAPGASRRAAEQSAAKLALEA 219
Query: 845 LKASFPGT 852
+A P +
Sbjct: 220 AQAISPAS 227
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 29/135 (21%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + H E LE LGDS L + + LF+ Y EG LS + ++ A+L
Sbjct: 19 LLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYSKIDEGDLSRLRANLVKQASL 78
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ +L ++R + K SG + + +A
Sbjct: 79 ADIAQRLELSQYLRLGEGELK--------SGGFR--------------------RPSILA 110
Query: 557 DVVEALIGA-FLSTG 570
D VEAL GA FL G
Sbjct: 111 DTVEALFGAVFLDAG 125
>gi|308234556|ref|ZP_07665293.1| ribonuclease III [Atopobium vaginae DSM 15829]
gi|328944154|ref|ZP_08241619.1| ribonuclease III [Atopobium vaginae DSM 15829]
gi|327492123|gb|EGF23897.1| ribonuclease III [Atopobium vaginae DSM 15829]
Length = 233
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 28/189 (14%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++H E ++ Y+F + L+ A+TH S + LP + Y+RLEFLGD++L ++ ++ K
Sbjct: 7 IKHAEQIIEYTFENKRLIQAAITHPSAVEGLP-VSASYERLEFLGDSILGAIVATDMFEK 65
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + G LT M+ + V+ ++ + + G+ + I+ E +
Sbjct: 66 FPGMDEGALTRMKISLVSGKTLSMVAEELGIGECIIFGDSEKGTGVR------------- 112
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR--LQPA 782
F AL ++ ESL GA+++++G V F IR L P + PE + + P
Sbjct: 113 --------GFTSALENVYESLVGALYLEAGYEPTVKF--IRRTLTPYMVPELAKHPISPK 162
Query: 783 RELNEYCQK 791
L E CQK
Sbjct: 163 SRLQEVCQK 171
>gi|222625280|gb|EEE59412.1| hypothetical protein OsJ_11562 [Oryza sativa Japonica Group]
Length = 422
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 34 KPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDNLL 93
+ TP FDI+K G CTL+LP + P+QTV +G LK+T CL+AC++LH IGALTD+LL
Sbjct: 299 ESTPAFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDSLL 358
Query: 94 PDVVV---EEHDAQKHGN 108
P++ V EE D N
Sbjct: 359 PELDVPCDEEPDIGGQDN 376
>gi|298245671|ref|ZP_06969477.1| ribonuclease III [Ktedonobacter racemifer DSM 44963]
gi|297553152|gb|EFH87017.1| ribonuclease III [Ktedonobacter racemifer DSM 44963]
Length = 251
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 31/252 (12%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR-CYQRLEFLGDAVLDYLITVY 660
E + N+ LE+LL +F D SLL+ A+TH S R Y LEFLGDA++ + Y
Sbjct: 5 ENIDNLLALEALLQVTFHDRSLLLRAITHHSCCTETALRDSYDTLEFLGDAIISAHVVEY 64
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL 720
+Y +P S GD+T ++S V+ +AL + G L+ +I + + +
Sbjct: 65 IYRSFPNASEGDMTALKSEVVSRRVFALIGQQLG-----------LFPFIRVDIANLR-- 111
Query: 721 SLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPM-ITPETM 777
TF S S D++E+L GAI +D G ++ V +I P++E + + +T
Sbjct: 112 ----TFNERSRDSL---CADVLEALVGAIHIDQGSEVARDFVARAILPMVEQISVQADT- 163
Query: 778 RLQPARELNEYCQKHHFSMKKTVAPRINGK---AAVTVEVHANGTLFKHTHADADKETAK 834
P L + + S+ + +G+ V V+ TL A + KE A
Sbjct: 164 --NPKGRLQKIILQRTGSLPRYRVLEQSGRNNDRIFLVGVYDQETLLGLGKASSIKE-AG 220
Query: 835 KVASKEVLKSLK 846
++A++E L++L+
Sbjct: 221 RLAAREALEALQ 232
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 76/191 (39%), Gaps = 39/191 (20%)
Query: 417 NLKNMLLDHCMQNVTI-PTSKVLEAITTKKCQEGFHL----ESLETLGDSFLKYAASQQL 471
N+ N+L + VT S +L AIT C L ++LE LGD+ + + +
Sbjct: 6 NIDNLLALEALLQVTFHDRSLLLRAITHHSCCTETALRDSYDTLEFLGDAIISAHVVEYI 65
Query: 472 FKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYEL 531
++++ N EG ++ K ++S +G L FIR + +
Sbjct: 66 YRSFPNASEGDMTALKSEVVSRRVFALIGQQLGLFPFIRVD------------------I 107
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
+ FNER + ADV+EAL+GA G V F+ R +
Sbjct: 108 ANLRTFNERS---------RDSLCADVLEALVGAIHIDQGSEVARDFVAR-------AIL 151
Query: 592 PYERQFQVQAE 602
P Q VQA+
Sbjct: 152 PMVEQISVQAD 162
>gi|357518351|ref|XP_003629464.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355523486|gb|AET03940.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 67
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 47/64 (73%)
Query: 560 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFR 619
EALIGAFLS GGE L+++D IGIKV+ PYERQF + L+ V +LESLLNYSFR
Sbjct: 4 EALIGAFLSAGGEMAALLYMDWIGIKVNINITPYERQFNACPDNLIIVSYLESLLNYSFR 63
Query: 620 DPSL 623
D SL
Sbjct: 64 DRSL 67
>gi|333923291|ref|YP_004496871.1| ribonuclease 3 [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333748852|gb|AEF93959.1| Ribonuclease 3 [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 246
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 38/257 (14%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLYN 663
V L++ + + + +PSLL +ALTH S + + QRLEFLGDAVL+ LI+ YLY
Sbjct: 8 VNRLKAKIGFEWSNPSLLTQALTHSSCVHESRGQGLHHNQRLEFLGDAVLELLISEYLYQ 67
Query: 664 KYPTLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
++P + G+LT MR+ASV C +L+ V GL +L + + +
Sbjct: 68 RFPDRTEGELTKMRAASV---CEPSLAKVARGL---------DLGRCLRMGRGE------ 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLEPMITPETMRLQ 780
E + G E P L D E+L GAI++D G + V E + P++ ++ R
Sbjct: 110 ERSGGRER----PSILADAFEALLGAIYLDHGLEAARRFVLEQLNPIITDVVAGRLDR-D 164
Query: 781 PARELNEYCQKH-----HFSMKKTVAPRING--KAAVTVEVHANGTLFKHTHADADKETA 833
EL E Q++ + + K P + A V G H+ +A+++ A
Sbjct: 165 YKTELQERLQQNSPDPVSYVIMKETGPDHDKVFTAGVIYRGQIIGQGSGHSKKEAEQQAA 224
Query: 834 KKVASKEVLKSLKASFP 850
K ++ L +LK + P
Sbjct: 225 KDAFNR--LDALKHTGP 239
>gi|254428849|ref|ZP_05042556.1| ribonuclease III [Alcanivorax sp. DG881]
gi|196195018|gb|EDX89977.1| ribonuclease III [Alcanivorax sp. DG881]
Length = 228
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 27/205 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
++ L + L Y F+D SLL ALTH S R Y+RLEFLGDA L +I+V L+ ++
Sbjct: 4 DLNRLMARLGYQFQDISLLELALTHRSV---SRHRNYERLEFLGDAQLGQIISVALFEQF 60
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P + G LT MR++ V AL + + GL ++++ EL F R S+
Sbjct: 61 PEAAEGQLTRMRASLVRGQTLALVARELGLGEYLVLGGGELKS------GGFRRDSI--- 111
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPAR 783
L D +ES+ GA+ +D G + +EVV P L+ I+P++ +
Sbjct: 112 ------------LADALESIIGAMLLDGGESRCREVVLCWFAPRLDA-ISPQSAQKDAKT 158
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA 808
L E+ Q F + ++ G A
Sbjct: 159 RLQEWLQARKFELPTYEVTQVEGLA 183
>gi|456012685|gb|EMF46373.1| Ribonuclease III [Planococcus halocryophilus Or1]
Length = 251
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLYNKY 665
L+ LN +F P+LL +A TH SY+ + + +RLEFLGDAVL+ ++ YLY KY
Sbjct: 25 QLQKELNITFNKPTLLYQAFTHSSYVNEHRRKQFTDNERLEFLGDAVLELSVSHYLYMKY 84
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P +S G+LT +R+A V L + + G K+IL E E T
Sbjct: 85 PEMSEGELTKLRAAIVCEPSLVLFANELGFGKYILLGKGE-----------------ELT 127
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
G + P L D+ ES GA+++D G V F
Sbjct: 128 GG----RTRPALLADVFESYIGALYLDQGLEPVVAF 159
>gi|312135000|ref|YP_004002338.1| ribonuclease iii [Caldicellulosiruptor owensensis OL]
gi|311775051|gb|ADQ04538.1| ribonuclease III [Caldicellulosiruptor owensensis OL]
Length = 222
Score = 81.6 bits (200), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 28/185 (15%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L Y F D +LL ALTH S CY+RLEFLGDA L+ ++ YLY +P
Sbjct: 1 MEEIEKALGYKFEDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLYVYFP 59
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
LS G+LT++R+A V + + + K L HI+ +E ++ F
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKRE-------KMEKF--------- 103
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELN 786
+E+++ L D++E+L GAIF++SG F+++ ++ ++ P + +
Sbjct: 104 -YENKS----ILADVLEALFGAIFIESG------FDTVEKIIVNLLKPYIQKAVAGKLFY 152
Query: 787 EYCQK 791
+Y K
Sbjct: 153 DYKTK 157
>gi|238897755|ref|YP_002923434.1| RNase III, ds RNA [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259491902|sp|C4K3Z3.1|RNC_HAMD5 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|229465512|gb|ACQ67286.1| RNase III, ds RNA [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 226
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 31/247 (12%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+N+ LE L YSF++ SLL++ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 4 ININSLELKLRYSFKERSLLLQALTHRSLH----TQHNERLEFLGDSILSFVIANQLYHR 59
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P ++ G+++ MR+ V D + + + ++ EL
Sbjct: 60 FPEINEGNMSRMRATLVRGDTLTEIAREFDIGAYLQLGQGEL-----------------K 102
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
T G + E+ L D IE++ GAIF+DS ++ + LE I P + P
Sbjct: 103 TGGAQRES----ILADSIEAIIGAIFLDSDIQTVEKTILRWYHKRLE-QINPTHHQKDPK 157
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASK 839
L EY Q H + + ++ G+A T+ +G +++ A++ A++
Sbjct: 158 TRLQEYMQSHQLPLPFYLLAQVCGEAHDQEFTIHCQVSGLEELVVGKGSNRRKAEQEAAE 217
Query: 840 EVLKSLK 846
+ LK L+
Sbjct: 218 KTLKKLE 224
>gi|365902819|ref|ZP_09440642.1| ribonuclease III [Lactobacillus malefermentans KCTC 3548]
Length = 232
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 28/153 (18%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
N F+D SLL EALT SY + E P + Y+R+EFLGDAV+ ++++ Y++ +YP L
Sbjct: 13 FNIVFKDESLLDEALTQASY-VNEHPNQNLKFYERIEFLGDAVMQFVVSEYIFKRYPQLP 71
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHI-LHASQELYKWINITVDSFERLSLESTFGW 728
G LT +R+A VN + +A + + + +I L +EL ++ ER SL
Sbjct: 72 QGRLTRLRAAMVNEESFASFARECHFNDYIRLGKGEEL-------ANARERDSL------ 118
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
L DI ES GA+++D G K + F
Sbjct: 119 ---------LCDIFESFVGAVYMDQGIKKVITF 142
>gi|359440809|ref|ZP_09230722.1| ribonuclease III [Pseudoalteromonas sp. BSi20429]
gi|392533274|ref|ZP_10280411.1| RNase III, ds RNA [Pseudoalteromonas arctica A 37-1-2]
gi|358037515|dbj|GAA66971.1| ribonuclease III [Pseudoalteromonas sp. BSi20429]
Length = 225
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + Y F D LL +A+TH S+ + +RLEFLGD++L ++I LY K+
Sbjct: 4 NVTELYKKIGYEFADQGLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYAKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A ++ GL ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA F+DSG + +++ + L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAAFLDSGIDSCGDLILAWYQSRLDA-ISPGLNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q S+ G+A TVE +G + + + A++ A+++
Sbjct: 158 LLQEYLQARKLSLPGYTVVDTQGQAHNQTFTVECIVDG-MDSIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKILK 222
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 29/155 (18%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L+ + EG LS + ++ L
Sbjct: 21 LLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG + + T+A
Sbjct: 81 AEFGLEFGLGDYLRLGPGELK--------SGGFR--------------------RESTLA 112
Query: 557 DVVEALIG-AFLSTGGENVGLIFLDRIGIKVDFVN 590
D VEA+IG AFL +G ++ G + L ++D ++
Sbjct: 113 DAVEAIIGAAFLDSGIDSCGDLILAWYQSRLDAIS 147
>gi|218780584|ref|YP_002431902.1| ribonuclease III [Desulfatibacillum alkenivorans AK-01]
gi|218761968|gb|ACL04434.1| Ribonuclease III [Desulfatibacillum alkenivorans AK-01]
Length = 535
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 33/189 (17%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY----QRLEFLGDAVLDYLITVYLYNKY 665
LE L Y+F+ P LL+EA+ H SY+ E P C +RLEFLGDAVL+ ++ L +KY
Sbjct: 309 LEEALGYNFKTPELLLEAMCHSSYV-NEHPDCTWTHNERLEFLGDAVLNLAVSDMLMSKY 367
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
GDL+ +R++ VN A + G+ +H+L E
Sbjct: 368 SENREGDLSRLRASLVNEGQLAEIARSLGIGQHLLLGKGE-----------------ARG 410
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE- 784
GW+ + L D +E++ G I+ DSG F+ I+ L+ P+I PE + + A++
Sbjct: 411 RGWDKNS----ILADSLEAVFGGIYSDSGYAD--AFKVIKNLIAPLI-PEEVAVAAAQDY 463
Query: 785 ---LNEYCQ 790
L EY Q
Sbjct: 464 KTRLQEYAQ 472
>gi|406959925|gb|EKD87146.1| hypothetical protein ACD_37C00027G0006 [uncultured bacterium]
Length = 229
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 40/241 (16%)
Query: 617 SFRDPSLLVEALTHGSYML--PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
+F++ +LL +AL H SY+ EI +RLEFLGD+++ ++++ YLY+ + G LT
Sbjct: 15 NFKNKALLNQALVHRSYLNENKEIITSNERLEFLGDSIISFIVSSYLYDNFKNYDEGRLT 74
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF 734
++RS VN A + + L +L + E E + G +++
Sbjct: 75 NLRSLLVNTKSLADCARELDLGSRLLLSKGE-----------------EESGGRNNQS-- 115
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET-------MRLQPARELNE 787
L D+ E+L GA+F+DSG ++++ LLE ++ P+T M P L E
Sbjct: 116 --LLADVFEALVGALFLDSGV------QAVKKLLEEVLLPKTQSFVEKNMLKDPKSLLQE 167
Query: 788 YCQKHHFSMKKTVAPRING---KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
Y Q H S K V G TV L+ + K+ A+++A+ L+
Sbjct: 168 YIQSHKKSSPKYVVLLEEGLPHAKLFTVGAFVGEKLYGKGEGKS-KQEAEEIAASNALEK 226
Query: 845 L 845
L
Sbjct: 227 L 227
>gi|254468787|ref|ZP_05082193.1| ribonuclease III [beta proteobacterium KB13]
gi|207087597|gb|EDZ64880.1| ribonuclease III [beta proteobacterium KB13]
Length = 228
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
V+ LE LL Y F+D +LL ++LTH S+ +RLEFLGD++L++ I L+ K+P
Sbjct: 6 VKQLEDLLQYKFKDINLLQKSLTHRSFD----GENNERLEFLGDSILNFTIAEALFIKFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GDL+ +R++ V + A +VK L I EL +
Sbjct: 62 NIPEGDLSRLRASLVKSGTLAEIAVKIKLGDFIFLGEGEL-----------------KSA 104
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF--ESIRPLLEPMITPETMRLQPARE 784
GW P L D E++ GA+++D G F + + L I P + P
Sbjct: 105 GWRR----PSILADTFEAIIGALYLDGGLRPAQTFIHQYFQDWLSE-INPAKVDKDPKTS 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L E Q + K I G+A
Sbjct: 160 LQELLQSKKLMLPKYEVADIKGEA 183
>gi|146296620|ref|YP_001180391.1| ribonuclease III [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145410196|gb|ABP67200.1| Ribonuclease III [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 224
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 24/163 (14%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E L Y F++P+LL ALTH S + CY+RLEFLGDAVL+ +++ YL+ +P LS
Sbjct: 4 IEKKLGYRFKNPNLLKLALTHKSATHDD-KSCYERLEFLGDAVLELVVSKYLFEHFPQLS 62
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G+LT++R+ V ++ + + L ++I+ E G+E
Sbjct: 63 EGELTNLRATIVCSETLSKVAETLNLKRYIVFGKN------------------EKKEGFE 104
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
S D++E++ G IF++SG + + + + LLEP I
Sbjct: 105 GNKSI---WSDVLEAIFGGIFLESGFD--MAEKIVINLLEPFI 142
>gi|427394181|ref|ZP_18887683.1| ribonuclease III [Alloiococcus otitis ATCC 51267]
gi|425730169|gb|EKU93012.1| ribonuclease III [Alloiococcus otitis ATCC 51267]
Length = 235
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 32/176 (18%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP---RCYQRLEFLGDAVLDYLIT 658
E+L N H++S + F+D SLL+EA TH SY + +RLEFLGDAV++ +
Sbjct: 3 EKLKN--HIKSEFDLEFKDESLLLEAFTHSSYANDHHQARHKNLERLEFLGDAVVELCTS 60
Query: 659 VYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFE 718
YLY+K+P L G LT +R+ASV + A + + L + IL E
Sbjct: 61 AYLYDKFPELPEGQLTRIRAASVRAESLAQLARECDLPQFILLGKGE------------- 107
Query: 719 RLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
E G E P L D+ E+ +GAIF D G +E R L ++ P
Sbjct: 108 ----EMMQGRER----PALLCDVFEAFTGAIFQDQG------YEQARQFLSQVLFP 149
>gi|33593415|ref|NP_881059.1| ribonuclease III [Bordetella pertussis Tohama I]
gi|33597819|ref|NP_885462.1| ribonuclease III [Bordetella parapertussis 12822]
gi|33602721|ref|NP_890281.1| ribonuclease III [Bordetella bronchiseptica RB50]
gi|384204710|ref|YP_005590449.1| ribonuclease III [Bordetella pertussis CS]
gi|408416453|ref|YP_006627160.1| ribonuclease III [Bordetella pertussis 18323]
gi|410473788|ref|YP_006897069.1| ribonuclease III [Bordetella parapertussis Bpp5]
gi|427815737|ref|ZP_18982801.1| ribonuclease III [Bordetella bronchiseptica 1289]
gi|427818292|ref|ZP_18985355.1| ribonuclease III [Bordetella bronchiseptica D445]
gi|427825850|ref|ZP_18992912.1| ribonuclease III [Bordetella bronchiseptica Bbr77]
gi|81424808|sp|Q7VW39.1|RNC_BORPE RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|81426476|sp|Q7W5J6.1|RNC_BORPA RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|81429935|sp|Q7WD32.1|RNC_BORBR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|33572771|emb|CAE42703.1| ribonuclease III [Bordetella pertussis Tohama I]
gi|33574248|emb|CAE38580.1| ribonuclease III [Bordetella parapertussis]
gi|33577163|emb|CAE35720.1| ribonuclease III [Bordetella bronchiseptica RB50]
gi|332382824|gb|AEE67671.1| ribonuclease III [Bordetella pertussis CS]
gi|401778623|emb|CCJ64063.1| ribonuclease III [Bordetella pertussis 18323]
gi|408443898|emb|CCJ50592.1| ribonuclease III [Bordetella parapertussis Bpp5]
gi|410566737|emb|CCN24306.1| ribonuclease III [Bordetella bronchiseptica 1289]
gi|410569292|emb|CCN17385.1| ribonuclease III [Bordetella bronchiseptica D445]
gi|410591115|emb|CCN06212.1| ribonuclease III [Bordetella bronchiseptica Bbr77]
Length = 256
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 31/247 (12%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L++ F D +LL +ALTH S+ R +RLEFLGD+VL++++ L+ +Y L
Sbjct: 9 LETRLDHRFGDKALLEQALTHRSHG----ARHNERLEFLGDSVLNFVVAAMLFERYGKLD 64
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + L +++ EL F R
Sbjct: 65 EGDLSRLRANLVKQASLADIAQRLDLSQYLRLGEGELKS------GGFRR---------- 108
Query: 730 SETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E+L GA+F+D+G + V+ +P++ + P+T+ L E
Sbjct: 109 -----PSILADTVEALFGAVFLDAGFEAARRVIVRQYQPVM-AHVDPKTLGKDAKTLLQE 162
Query: 788 YCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
+ Q ++ + +G A VE K A + A++ A+K L++
Sbjct: 163 FLQGRKLALPQYTVVATHGAAHSQQFEVECAIPALEIKIVAPGASRRAAEQSAAKVALEA 222
Query: 845 LKASFPG 851
+A P
Sbjct: 223 AQAVLPA 229
>gi|410421196|ref|YP_006901645.1| ribonuclease III [Bordetella bronchiseptica MO149]
gi|408448491|emb|CCJ60174.1| ribonuclease III [Bordetella bronchiseptica MO149]
Length = 256
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 31/247 (12%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L++ F D +LL +ALTH S+ R +RLEFLGD+VL++++ L+ +Y L
Sbjct: 9 LETRLDHRFGDKALLEQALTHRSHG----ARHNERLEFLGDSVLNFVVAAMLFERYGKLD 64
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + L +++ EL F R
Sbjct: 65 EGDLSRLRANLVKQASLADIAQRLDLSQYLRLGEGELKS------GGFRR---------- 108
Query: 730 SETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E+L GA+F+D+G + V+ +P++ + P+T+ L E
Sbjct: 109 -----PSILADTVEALFGAVFLDAGFEAARRVIVRQYQPVM-AHVDPKTLGKDAKTLLQE 162
Query: 788 YCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
+ Q ++ + +G A VE K A + A++ A+K L++
Sbjct: 163 FLQGRKLALPQYTVVATHGAAHSQQFEVECAIPALEIKIVAPGASRRAAEQSAAKVALEA 222
Query: 845 LKASFPG 851
+A P
Sbjct: 223 AQAVLPA 229
>gi|224372163|ref|YP_002606535.1| ribonuclease III [Nautilia profundicola AmH]
gi|223589278|gb|ACM93014.1| ribonuclease III [Nautilia profundicola AmH]
Length = 226
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 27/190 (14%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + LE L Y F++ L+ EALTH SY E+ +RLEFLGDAV+D ++ YL++
Sbjct: 1 MQISELEKSLGYQFKNKKLITEALTHRSYK-KEVNN--ERLEFLGDAVMDLIVGEYLFHL 57
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P G L+ +R+A VN D + + + L K++ + E E+
Sbjct: 58 FPKAEEGILSKLRAALVNEDSFTRLAKRLNLGKYLYLSPAE-----------------EN 100
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE--PMITPETMRLQPA 782
G E P L E++ GAI++++G K ++R L E P+ITPE +
Sbjct: 101 NNGREK----PSILSSAFEAVIGAIYLEAGFEKAKDV-ALRLLKEEFPIITPEELLKDYK 155
Query: 783 RELNEYCQKH 792
L E Q H
Sbjct: 156 TTLQEITQAH 165
>gi|321457596|gb|EFX68679.1| hypothetical protein DAPPUDRAFT_259733 [Daphnia pulex]
Length = 402
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 34/183 (18%)
Query: 602 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+ L ++ E++L+Y+ D +L+EA THG+ M + YQRLE +GDA L
Sbjct: 79 DELNSLAKFENILHYTSNDKEVLLEAFTHGNSMKSQ---NYQRLELIGDAAL-------- 127
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI----------N 711
GD+T +RSA V ND + + + K+G H+H+ + L K N
Sbjct: 128 ---------GDITKLRSACVCNDIFGVWAAKYGFHEHVQNLPPILLKQFNDFLEVVEREN 178
Query: 712 ITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
IT FER + ++ + P L D+ E++ GAI +D+ + FE++ +
Sbjct: 179 ITFAPFERELAANGQIMATQVAIPSFLADVFEAVEGAIIIDANLS----FETLERVYARF 234
Query: 772 ITP 774
+TP
Sbjct: 235 MTP 237
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
+ +L V+ E +LNYSF +L+EALT+G+ + YQRLE +GDA LDY +++
Sbjct: 309 SNQLSAVKAFEEILNYSFNYKEVLLEALTYGNSIR---SLNYQRLEVIGDAALDY-PSIF 364
Query: 661 LYNKYPTLSP 670
+ P +SP
Sbjct: 365 FSSDSPPVSP 374
>gi|150021479|ref|YP_001306833.1| ribonuclease III [Thermosipho melanesiensis BI429]
gi|149794000|gb|ABR31448.1| Ribonuclease III [Thermosipho melanesiensis BI429]
Length = 231
Score = 80.9 bits (198), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 29/241 (12%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E ++ Y FR+ LL ALTH SY + Y+RLEFLGD+V+D L+ LY +Y TL+
Sbjct: 9 IEHVIGYRFRNKELLFTALTHTSYANENKKQSYERLEFLGDSVIDILVCTILYEQYQTLN 68
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G + ++SA + D + K L K+IL E + G E
Sbjct: 69 EGTMAQIKSAVTSEDILFEIAKKFNLGKYILLGKGE-----------------RRSRGSE 111
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVV---FESI-RPLLEPMITPETMRLQPAREL 785
++ L D++ESL AI++DS N +++ F I + ++ +T + + +L
Sbjct: 112 KKS----ILADVVESLIAAIYLDSNKNLKLIENLFSKIFKDYIDIFLTGKRI-FDYKTKL 166
Query: 786 NEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
E Q + + GK T+++ N ++ + K+ A+K+A+K + L
Sbjct: 167 QELTQDKFKQLPVYETTTVGGKFITTLKI--NNKIYSKAKGSSKKD-AEKLAAKIAYEKL 223
Query: 846 K 846
K
Sbjct: 224 K 224
>gi|392957494|ref|ZP_10323017.1| ribonuclease III [Bacillus macauensis ZFHKF-1]
gi|391876457|gb|EIT85054.1| ribonuclease III [Bacillus macauensis ZFHKF-1]
Length = 261
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 43/253 (16%)
Query: 603 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLDYLITV 659
R+ V L+ ++ F D LLV+A TH SY+ R Y+ RLEFLGDAVL+ I+
Sbjct: 32 RIQKVAPLQEKISLYFVDEKLLVQAFTHSSYVNEHRGRPYEDNERLEFLGDAVLELTISQ 91
Query: 660 YLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER 719
+LY KYPT+S G+LT +R+A V L + + ++L E
Sbjct: 92 FLYKKYPTMSEGELTKLRAAIVCEPSLVLLANELHFGDYVLLGKGE-------------- 137
Query: 720 LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE---- 775
E+T G + P L D+ E+ GA+++D G + +++ LE + P
Sbjct: 138 ---ENTGG----RTRPALLADVFEAFIGALYLDKGID------AVKAFLEIHVHPRINEG 184
Query: 776 --TMRLQPARELNEYCQKH-----HFSMKKTVAPRINGKAAVTVEVHAN--GTLFKHTHA 826
+ + +L EY Q+ +++ + P N + V+++ G F +
Sbjct: 185 AFSHVMDFKSQLQEYVQREGLGTIDYAIIQEKGPAHNREFVSEVKLNQEGCGVGFGRSKK 244
Query: 827 DADKETAKKVASK 839
+A++ A++ K
Sbjct: 245 EAEQHAAQEALGK 257
>gi|332532635|ref|ZP_08408511.1| ribonuclease III [Pseudoalteromonas haloplanktis ANT/505]
gi|332037851|gb|EGI74300.1| ribonuclease III [Pseudoalteromonas haloplanktis ANT/505]
Length = 225
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + Y F D LL +A+TH S+ + +RLEFLGD++L ++I LY K+
Sbjct: 4 NVTELYKKIGYEFADQGLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYAKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A ++ GL ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA F+DSG + +++ L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAAFLDSGIDSCGDLILSWYESRLDA-ISPGLNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q S+ G+A TVE +G + + + A++ A+++
Sbjct: 158 LLQEYLQARKLSLPGYTVVDTKGQAHNQTFTVECIVDG-MDSIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKILK 222
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 29/155 (18%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L+ + EG LS + ++ L
Sbjct: 21 LLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG + + T+A
Sbjct: 81 AEFGLEFGLGDYLRLGPGELK--------SGGFR--------------------RESTLA 112
Query: 557 DVVEALIG-AFLSTGGENVGLIFLDRIGIKVDFVN 590
D VEA+IG AFL +G ++ G + L ++D ++
Sbjct: 113 DAVEAIIGAAFLDSGIDSCGDLILSWYESRLDAIS 147
>gi|322379758|ref|ZP_08054068.1| ribonuclease III [Helicobacter suis HS5]
gi|321147829|gb|EFX42419.1| ribonuclease III [Helicobacter suis HS5]
Length = 224
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 29/184 (15%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L+ L Y F+DP LL +ALTH S + + +RLEFLGDAVLD ++ L+ ++ L
Sbjct: 5 LQKRLGYVFKDPLLLQQALTHRS---TKAHKNNERLEFLGDAVLDLVVAEILFTRFTDLQ 61
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ MR++ VN + ++ L HIL + E
Sbjct: 62 EGDLSKMRASLVNEKAFFKLALSLNLQDHILISQAE---------------------ANN 100
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE---PMITPETMRLQPARELN 786
+ + P L E+L GAI+++SG E++ I+ LL+ P ++P+T+ + L
Sbjct: 101 NGHTKPSILSSAFEALMGAIYLESGL--EIIKNLIQDLLDMAYPNLSPKTLFMDYKSALQ 158
Query: 787 EYCQ 790
E Q
Sbjct: 159 ELTQ 162
>gi|71907657|ref|YP_285244.1| ribonuclease III [Dechloromonas aromatica RCB]
gi|90101622|sp|Q47EF7.1|RNC_DECAR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|71847278|gb|AAZ46774.1| RNAse III [Dechloromonas aromatica RCB]
Length = 222
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 55/251 (21%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
LN+ F D +L ALTH S+ P +RLEFLGD VLD++I LY+++P L GDL
Sbjct: 10 LNHCFSDQALFRTALTHRSFGTPN----NERLEFLGDGVLDFVIAASLYHRFPDLPEGDL 65
Query: 674 TDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERL---SLESTFGWES 730
+ +R+ V + LH+ L + + +F RL L+S
Sbjct: 66 SRLRANLVRQET---------LHRLALE----------LNIGAFLRLGEGELKS-----G 101
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR------- 783
P L D +E+L GAI++D+G FE+ R ++E + P L+P +
Sbjct: 102 GAQRPSILADALEALFGAIYLDAG------FEASRAVIEKLFAPLLDDLKPGQFQKDAKT 155
Query: 784 ELNEYCQ-------KHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
L E+ Q ++H A + A +E A + + + A++V
Sbjct: 156 RLQEWLQGRKKALPRYHLLEATGAAHEQRFEIACEIESPA----LRTVGHGSSRRIAEQV 211
Query: 837 ASKEVLKSLKA 847
A+++ LK L A
Sbjct: 212 AAEKALKELLA 222
>gi|330444350|ref|YP_004377336.1| ribonuclease III [Chlamydophila pecorum E58]
gi|328807460|gb|AEB41633.1| ribonuclease III [Chlamydophila pecorum E58]
Length = 231
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 40/252 (15%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYL 661
+VNV+ +ES LN++F P LLV A TH SY P +RLEFLGDAVL ++T +L
Sbjct: 4 IVNVKEIESKLNFTFTQPQLLVTAFTHPSYRNESPVPIEDSERLEFLGDAVLGLIVTEHL 63
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ +P L G L+ +R++ V D A S ++ L N+ + ERL
Sbjct: 64 FLLFPNLEEGVLSTIRASLV--DASACSGY-----------AESLGVCENLLIGKGERL- 109
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ- 780
+++ + ++ E++ GAI++D G + R L P++ P +LQ
Sbjct: 110 -------QNQRGKLSSQANLFEAILGAIYLDGGLS------PARQLTVPLL-PSKEKLQP 155
Query: 781 -----PARELNEYCQKHHFSMKKTVAPRINGKAAVT---VEVHANGTLFKHTHADADKET 832
P L ++ QKH ++ K A + K V V+V + L+ A + KE
Sbjct: 156 LMFGNPKNLLQQFTQKHLRTLPKYQATQYVSKEGVMSHHVQVFIHDELWGEGVAHSKKE- 214
Query: 833 AKKVASKEVLKS 844
A+K+A++ L +
Sbjct: 215 AEKLAAQHALDT 226
>gi|78044311|ref|YP_360276.1| ribonuclease III [Carboxydothermus hydrogenoformans Z-2901]
gi|90101616|sp|Q3AC58.1|RNC_CARHZ RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|77996426|gb|ABB15325.1| ribonuclease III [Carboxydothermus hydrogenoformans Z-2901]
Length = 235
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLP---EIPRCYQRLEFLGDAVLDYLITVYLY 662
N+ LE +L ++F +PS+L+ A+TH SY E +RLEFLGDAVL+ I+ YL+
Sbjct: 5 NLISLEKILGFNFNNPSILLSAITHPSYAFEHPEEGIEHNERLEFLGDAVLELFISDYLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW-INITVDSFERLS 721
+P S GDLT +RS V C ++ LY+ I +D F RL
Sbjct: 65 RTFPQKSEGDLTKLRSRLV---C-----------------AESLYELAFKINLDKFLRLG 104
Query: 722 L-ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ 780
E G S L + +E++ GA++ D C E F I L + PE +
Sbjct: 105 KGEFKAGGNQRMS---NLANAVEAVIGAVYFD--CGIEAAFSFITRLYGEKLKPENLEQL 159
Query: 781 PARE---LNEYCQKHHFSMKKTVAPRING---KAAVTVEVHANGTLFKHTHADADKETAK 834
P E L E QK ++ + G + T V N L + KE +
Sbjct: 160 PKDEKTTLQELLQKEKNNVLRYEILLEEGPPHQKIFTAGVIINDKLIATGRGKSKKEAEQ 219
Query: 835 KVASK--EVLKSLK 846
+ A K E+LK+ K
Sbjct: 220 EAAKKALELLKNEK 233
>gi|312793340|ref|YP_004026263.1| ribonuclease iii [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180480|gb|ADQ40650.1| ribonuclease III [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 222
Score = 80.5 bits (197), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ +E L Y+F+D +LL ALTH S CY+R EFLGDA L+ ++ YL+ +P
Sbjct: 1 MEEIERALGYTFKDKNLLRLALTHKSATHSN-KNCYERFEFLGDAALELAVSKYLFVHFP 59
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
LS G+LT++R+A V + + + K L HI+ +E E+ +
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKRE----------KMEKFHENKSI 109
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
L D++E++ GAIF++SG ++V + I LL+P I
Sbjct: 110 -----------LADVLEAIFGAIFIESGF--DIVEKIIVNLLKPYI 142
>gi|34558193|ref|NP_908008.1| ribonuclease III [Wolinella succinogenes DSM 1740]
gi|81653364|sp|Q7M840.1|RNC_WOLSU RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|34483912|emb|CAE10908.1| RIBONUCLEASE III [Wolinella succinogenes]
Length = 238
Score = 80.5 bits (197), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 26/164 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
++ E L Y F++ +LL+EALTH SY + P +RLEFLGDAVLD +I +L+ K+
Sbjct: 3 SIEEFEKRLGYRFQNKNLLIEALTHKSY---KKPYNNERLEFLGDAVLDLVIGEFLFLKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P G+L+ MR++ VN +A + + L +HI ++ E E+
Sbjct: 60 PKADEGELSKMRASLVNEKGFAKLAERVSLGRHIFISNAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
G E P L + E+ GAI++++G + VV E + LL+
Sbjct: 103 KGREK----PSLLSNAFEATMGAIYLETGLS--VVREVVHRLLD 140
>gi|221135073|ref|ZP_03561376.1| ribonuclease III [Glaciecola sp. HTCC2999]
Length = 241
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 34/203 (16%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L+ L++Y F D SLL +ALTH S + +RLEFLGDAVL ++ +L+ +P
Sbjct: 24 LQRLIDYQFNDVSLLKQALTHKSAH----RQHNERLEFLGDAVLGMIVGEHLFKAFPNSP 79
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G LT MRSA V D A +++ GL + I + EL +R S+
Sbjct: 80 EGKLTRMRSAIVKGDTLAEIALEKGLGEFIQLGAGELKSG------GKQRYSI------- 126
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNK-----EVVFESIRPLLEPMITPETMRLQPARE 784
L D++ES+ GAI++D+G N+ F + L+P + P+ + +
Sbjct: 127 --------LADVVESIIGAIYLDAGMNQCYDFIHAWFGARIAKLDPDVHPKDAKTR---- 174
Query: 785 LNEYCQKHHFSMKKTVAPRINGK 807
L EY Q + I GK
Sbjct: 175 LQEYLQSRGIELPVYEVVDIKGK 197
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 33/152 (21%)
Query: 422 LLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEG 481
L+D+ +V++ L+ T K H E LE LGD+ L + LFK + N EG
Sbjct: 27 LIDYQFNDVSL-----LKQALTHKSAHRQHNERLEFLGDAVLGMIVGEHLFKAFPNSPEG 81
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
L+ + I+ L ++ + L FI+ G+ EL
Sbjct: 82 KLTRMRSAIVKGDTLAEIALEKGLGEFIQL---------------GAGELK--------- 117
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 573
+G K+ + +ADVVE++IGA G N
Sbjct: 118 ---SGGKQ-RYSILADVVESIIGAIYLDAGMN 145
>gi|154173754|ref|YP_001409228.1| ribonuclease III [Campylobacter curvus 525.92]
gi|402546497|ref|ZP_10843372.1| ribonuclease III [Campylobacter sp. FOBRC14]
gi|189043298|sp|A7H186.1|RNC_CAMC5 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|112803490|gb|EAU00834.1| ribonuclease III [Campylobacter curvus 525.92]
gi|401017310|gb|EJP76071.1| ribonuclease III [Campylobacter sp. FOBRC14]
Length = 223
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 24/152 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
++ +L+ LL Y F + LL EALTH S ++P +RLEFLGDAV+D ++ YL+ K+
Sbjct: 3 DLENLQKLLGYEFENTKLLNEALTHKS---TKLPYSNERLEFLGDAVMDLIVGEYLFKKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ GD++ +R+A VN +A + +H+ ++ ++I+++ + E+
Sbjct: 60 SKTNEGDMSKLRAALVNEKSFA------NMARHL-----QIGEFIHLS-------TAEAN 101
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
G + S L D E++ GA+++++G +K
Sbjct: 102 NGGREKASL---LSDAFEAVMGAVYLEAGLDK 130
>gi|145517933|ref|XP_001444844.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830355|emb|CAI39054.1| Ribonuclease with two RNaseIII domains [Paramecium tetraurelia]
gi|124412277|emb|CAK77447.1| unnamed protein product [Paramecium tetraurelia]
Length = 632
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 129/330 (39%), Gaps = 79/330 (23%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EAI T + E+LE LGDS LKY + +FK Y+ EG ++ + R+I N L +
Sbjct: 346 EAIVTSSFNFKRNYENLEVLGDSVLKYVITADIFKQYKLLDEGEMTSLRSRLIMNTFLAQ 405
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
L L FI + K P N I + K+++ AD+
Sbjct: 406 LFEQLGLEQFIINQDLHFKQIKNPLVND---------------IISSENKQLQISQKADI 450
Query: 559 VEALIGAFLSTGGENVGLIFLDR-----IGIKVDFVNVPYERQFQVQAERLVNVRHLESL 613
EA+IG T I + R I I D + YE Q E+ +++R
Sbjct: 451 YEAIIGGVFETTQSLYEYITILRRTNFPISIYKDIL-FDYEP-ITAQIEQ-IDIR----- 502
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY---------NK 664
+Y F +P L A+ P+ Y RLEFLGDA ++ L+ Y + N
Sbjct: 503 -DYKFNNPQLYEIAIN---------PQYYDRLEFLGDAAIELLVISYAFRVAREKQQKNP 552
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+L+PG L+ + + N ++K GL +
Sbjct: 553 NWSLNPGLLSTWKQYLLGNKFMGEQTIKMGLKPQV------------------------- 587
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSG 754
PK GDI +S++ AI +DSG
Sbjct: 588 -------NEIPKLYGDIFQSVAAAILLDSG 610
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+ES+LNY + EA+ S+ R Y+ LE LGD+VL Y+IT ++ +Y L
Sbjct: 335 VESILNYQVPE-----EAIVTSSF---NFKRNYENLEVLGDSVLKYVITADIFKQYKLLD 386
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
G++T +RS + N A + GL + I++
Sbjct: 387 EGEMTSLRSRLIMNTFLAQLFEQLGLEQFIIN 418
>gi|329297705|ref|ZP_08255041.1| ribonuclease III [Plautia stali symbiont]
Length = 226
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y+F P LL +ALTH S + +RLEFLGD++L Y+I LY+++P
Sbjct: 6 INKLQRKLGYTFTHPELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + S EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAEMAREFELGECLRLGSGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G IF+DS ++++ + + LE I+P + P
Sbjct: 112 -----------LADTVEALIGGIFLDSNIQTVEKLILDWYQNRLE-QISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q H + + ++ G+A
Sbjct: 160 LQEYLQGRHLPLPSYLVVQVRGEA 183
>gi|291277478|ref|YP_003517250.1| ribonuclease III [Helicobacter mustelae 12198]
gi|290964672|emb|CBG40527.1| ribonuclease III [Helicobacter mustelae 12198]
Length = 223
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 27/188 (14%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+R+LE +NY F++ LL+ ALTH S + + +RLE+LGDAVLD LI +LY ++P
Sbjct: 1 MRNLEKAINYHFKNQDLLLTALTHKS---CKNKKNNERLEYLGDAVLDLLIGEFLYQEFP 57
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
GDL+ MR+A VN + + L IL +S E E+
Sbjct: 58 EHKEGDLSKMRAALVNEQSFMRFAKAIHLQDFILISSNE-----------------ETNQ 100
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
G E P L E+L GA+++++G K++ + + L P I +++
Sbjct: 101 GREK----PSILSSAFEALIGAVYLEAGLERAKDITYHLLHKLY-PKIDTQSLFTDYKTA 155
Query: 785 LNEYCQKH 792
L E Q H
Sbjct: 156 LQELTQAH 163
>gi|342216431|ref|ZP_08709078.1| ribonuclease III [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587321|gb|EGS30721.1| ribonuclease III [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 233
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 34/246 (13%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE LNY F++ S + EA H S+ E + Y R EFLGDA+LD +++ YLY KYP+
Sbjct: 7 LEKKLNYQFKNKSSIEEAFQHASFANEEEGLKSYDRREFLGDALLDMVVSEYLYQKYPSK 66
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ GDLT +R+ V D +AL+++ GL+ +L +I + + + +
Sbjct: 67 NEGDLTVLRAQHV--DEHALNAI--GLY-------LDLDPYIKFRPQKYHKNQVSESM-- 113
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELN 786
GD++E++ +IF+++G KEV+ + LL T + L
Sbjct: 114 ---------RGDVVEAIFASIFLETGYQETKEVILHVYQSLLSQDKDVFTGQKNYKSTLQ 164
Query: 787 EYCQKHH------FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKE 840
EY QK + + + KT P + + +G K+ A ++A+K+
Sbjct: 165 EYYQKKYHKLSINYQVYKTQGPPWD---CIFYTYCKDGNRIIGQGFGGSKKEASQMAAKD 221
Query: 841 VLKSLK 846
L+ LK
Sbjct: 222 ALERLK 227
>gi|336450626|ref|ZP_08621073.1| ribonuclease III [Idiomarina sp. A28L]
gi|336282449|gb|EGN75681.1| ribonuclease III [Idiomarina sp. A28L]
Length = 235
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ +R +E L Y+F + +LL +ALTH S Y+RLEFLGD++L +I LY++
Sbjct: 6 IQLREIERRLGYNFNNHALLYQALTHRSAGEGH----YERLEFLGDSILSVVIAEALYHR 61
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P GDL+ MR+ V D A + + L K + EL F R S+
Sbjct: 62 FPKSPEGDLSRMRATLVCGDMLAKVAREFELGKFLNLGPGELKS------GGFRRDSI-- 113
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM---ITPETMRLQP 781
L D +E++ GAIF+DS N E V E +R +P+ I P +
Sbjct: 114 -------------LSDAVEAIIGAIFLDS--NIEKVQEIVRTWYQPLLAEIRPGNSQKDS 158
Query: 782 ARELNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q F++ G+A
Sbjct: 159 KTRLQEYLQSRQFAVPDYEVSATEGQA 185
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
+A+T + EG H E LE LGDS L ++ L+ + EG LS + ++ L K
Sbjct: 27 QALTHRSAGEG-HYERLEFLGDSILSVVIAEALYHRFPKSPEGDLSRMRATLVCGDMLAK 85
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
+ + +L F+ P + K SG + + ++D
Sbjct: 86 VAREFELGKFLNLGPGELK--------SGGFR--------------------RDSILSDA 117
Query: 559 VEALIGA-FLSTGGENV 574
VEA+IGA FL + E V
Sbjct: 118 VEAIIGAIFLDSNIEKV 134
>gi|412341945|ref|YP_006970700.1| ribonuclease III [Bordetella bronchiseptica 253]
gi|408771779|emb|CCJ56583.1| ribonuclease III [Bordetella bronchiseptica 253]
Length = 256
Score = 79.7 bits (195), Expect = 7e-12, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 31/247 (12%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L++ F D +LL +ALTH S+ R +RLEFLGD+VL++++ L+ +Y L
Sbjct: 9 LETRLDHRFGDKALLEQALTHRSHG----ARHNERLEFLGDSVLNFVVAAMLFERYGKLD 64
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + L +++ EL F R
Sbjct: 65 EGDLSRLRANLVKQASLADIAQRLDLSQYLRLGEGELKS------GGFRR---------- 108
Query: 730 SETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E+L GA+F+D+G + V+ +P++ + P+T+ L E
Sbjct: 109 -----PSILADTVEALFGAVFLDAGFEAARRVIVRQYQPVM-AHVDPKTLGKDAKTLLQE 162
Query: 788 YCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
+ Q ++ +G A VE K A + A++ A+K L++
Sbjct: 163 FLQGRKLALPLYTVVATHGAAHSQQFEVECAIPALEIKVVAPGASRRAAEQSAAKVALEA 222
Query: 845 LKASFPG 851
+A P
Sbjct: 223 AQAVLPA 229
>gi|388471204|ref|ZP_10145413.1| ribonuclease III [Pseudomonas synxantha BG33R]
gi|388007901|gb|EIK69167.1| ribonuclease III [Pseudomonas synxantha BG33R]
Length = 229
Score = 79.3 bits (194), Expect = 8e-12, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
V++ LE L Y+F+DP L+V ALTH S+ R +RLEFLGDA+L++ L+ +
Sbjct: 3 VSLSRLERQLGYTFKDPELMVLALTHRSFA----GRNNERLEFLGDAILNFAAGEALFER 58
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P G L+ +R+ V + A+ + GL +++ S EL F R S+
Sbjct: 59 FPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKS------GGFRRESI-- 110
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L GAI++D+G KE V + +E + +T + P
Sbjct: 111 -------------LADALEALIGAIYLDAGMETAKERVVAWLASEIESLTLVDTNK-DPK 156
Query: 783 RELNEYCQKHHFSMKKTVAPRINGK 807
L EY Q + + I G+
Sbjct: 157 TRLQEYLQSRGCELPRYEVVDIQGE 181
Score = 40.8 bits (94), Expect = 3.1, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
T + G + E LE LGD+ L +AA + LF+ + EG LS + R++ L L
Sbjct: 27 THRSFAGRNNERLEFLGDAILNFAAGEALFERFPQAREGQLSRLRARLVKGETLAVLARG 86
Query: 503 HKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEAL 562
L ++R GS EL E +AD +EAL
Sbjct: 87 FGLGEYLRL---------------GSGELKSGGFRRE-------------SILADALEAL 118
Query: 563 IGA-FLSTGGE 572
IGA +L G E
Sbjct: 119 IGAIYLDAGME 129
>gi|224582877|ref|YP_002636675.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224467404|gb|ACN45234.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 245
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 31/247 (12%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+F LL +ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 23 IVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHR 78
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 79 FPRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKS------GGFRRESI-- 130
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L G +F+DS ++++ + L+ I+P + P
Sbjct: 131 -------------LADTVEALIGGVFLDSNIQTVEQLILNWYKTRLDE-ISPGDKQKDPK 176
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASK 839
L EY Q H + + ++ G+A T+ +G + + A++ A++
Sbjct: 177 TRLQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 236
Query: 840 EVLKSLK 846
+VLK L+
Sbjct: 237 QVLKKLE 243
>gi|326791395|ref|YP_004309216.1| ribonuclease III [Clostridium lentocellum DSM 5427]
gi|326542159|gb|ADZ84018.1| ribonuclease III [Clostridium lentocellum DSM 5427]
Length = 240
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 24/165 (14%)
Query: 600 QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYL 656
+A + + + ++ L+Y+F + +LL EALTH SY E + +RLEFLGDA+LD +
Sbjct: 7 KANKSIVLDEMQRKLSYTFTNSNLLEEALTHSSYANEHRNERVKDNERLEFLGDAILDLI 66
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS 716
I+ YL+ K+P + GDL+ +R++ V A + GL ++IL E
Sbjct: 67 ISEYLFKKHPEMPEGDLSKIRASIVCEASLAKMARFIGLGEYILLGKGE----------- 115
Query: 717 FERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
E T G E + L D E+L+GA+F+D G N+ F
Sbjct: 116 ------EMTGGRERAS----ILADGFEALTGALFLDGGFNEAKCF 150
>gi|237746716|ref|ZP_04577196.1| ribonuclease III [Oxalobacter formigenes HOxBLS]
gi|229378067|gb|EEO28158.1| ribonuclease III [Oxalobacter formigenes HOxBLS]
Length = 273
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 30/196 (15%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
++N++ L+ + Y+F D +LL A+TH SY +RLEFLGD++L+ + + LY
Sbjct: 6 MINLKMLQDRIGYTFHDAALLETAMTHRSYS----SHHNERLEFLGDSLLNCVTAINLYE 61
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
+Y L+ G L+ +RS+ V + K L + + EL F+R
Sbjct: 62 RYAALNEGSLSRLRSSLVRQQALYEIACKLELSRFLRLGEGEL------KAGGFKR---- 111
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT---PETMRLQ 780
P L D +E+L GA+F+D+G E V I L M+ PET
Sbjct: 112 -----------PSILADAMEALFGAVFLDAGF--ETVKRVITRLFADMMKELDPETYGKD 158
Query: 781 PARELNEYCQKHHFSM 796
+L EY Q H ++
Sbjct: 159 AKTQLQEYLQGHKMAL 174
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 416 VNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTY 475
+NLK ML D T + +LE T + H E LE LGDS L + L++ Y
Sbjct: 7 INLK-MLQDRI--GYTFHDAALLETAMTHRSYSSHHNERLEFLGDSLLNCVTAINLYERY 63
Query: 476 QNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHS 535
+EG LS + ++ AL ++ C +L F+R
Sbjct: 64 AALNEGSLSRLRSSLVRQQALYEIACKLELSRFLR------------------------- 98
Query: 536 LFNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENV 574
E ++ G K + +AD +EAL GA FL G E V
Sbjct: 99 -LGEGELKAGGFK--RPSILADAMEALFGAVFLDAGFETV 135
>gi|407977619|ref|ZP_11158456.1| ribonuclease III [Bacillus sp. HYC-10]
gi|407415872|gb|EKF37453.1| ribonuclease III [Bacillus sp. HYC-10]
Length = 247
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 42/187 (22%)
Query: 598 QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLD 654
Q Q+++L R + ++ F++ LL +A TH SY+ + Y+ RLEFLGDAVL+
Sbjct: 9 QKQSKKLEQFREFQQRISVHFKNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLE 68
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINIT 713
I+ +L+ KYP +S GDLT +R+A V C +L S+ H L
Sbjct: 69 LTISQFLFAKYPAMSEGDLTKLRAAIV---CEPSLVSLAHEL------------------ 107
Query: 714 VDSFERLSL-----ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
SF L L E T G + P L D+ E+ GA+++D G E + L
Sbjct: 108 --SFGDLVLLGKGEEMTGGRKR----PALLADVFEAFIGALYLDQGL------EPVEQFL 155
Query: 769 EPMITPE 775
E + P+
Sbjct: 156 EAYVYPK 162
>gi|413918885|gb|AFW58817.1| hypothetical protein ZEAMMB73_714278 [Zea mays]
Length = 306
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%)
Query: 736 KALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFS 795
+ LGDI+ES GA+ +DSG N V++ + LL+P+++ M + P REL E CQ + F
Sbjct: 2 QVLGDIVESCVGAVLLDSGFNLNHVWKLMLMLLKPILSFCGMHIDPMRELRETCQYNGFD 61
Query: 796 MKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ + NG+ V VEV+ NG + T A+ + + A+KVA++E L LK
Sbjct: 62 LGLPEPTKYNGEFHVKVEVNINGKMISCTAANRNSKDARKVAAQETLSKLK 112
>gi|365157110|ref|ZP_09353391.1| ribonuclease 3 [Bacillus smithii 7_3_47FAA]
gi|363625844|gb|EHL76855.1| ribonuclease 3 [Bacillus smithii 7_3_47FAA]
Length = 243
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 26/168 (15%)
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR---CYQRLEFLGDAVLDYLITVYLYNK 664
R L+ L F D SLL++A TH SY+ + +RLEFLGDAVL+ ++ YL+NK
Sbjct: 17 RQLQKKLEIDFHDQSLLMQAFTHSSYVNEHRKKPNDDNERLEFLGDAVLELTVSNYLFNK 76
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
YP +S G+LT +R+A V C ++ S EL I + E L+
Sbjct: 77 YPFMSEGELTKLRAAVV---C----------EPSLVGFSNELQFGQYIRLGKGEELTGGR 123
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
T P L D+ E+ GA+++D G EVV + + ++ P I
Sbjct: 124 T--------RPALLADVFEAFIGALYLDQGL--EVVVQFLEKIVFPKI 161
>gi|302808147|ref|XP_002985768.1| hypothetical protein SELMODRAFT_122841 [Selaginella moellendorffii]
gi|300146677|gb|EFJ13346.1| hypothetical protein SELMODRAFT_122841 [Selaginella moellendorffii]
Length = 219
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-NVPYERQFQVQAERLV--- 605
+ +KT+ADVVEA++GA + G + + + I V F +F+V +
Sbjct: 13 LSTKTLADVVEAVLGACVLEGELAAAMAAANWLQIPVRFPPEAEDHHRFEVTGCGSLTDD 72
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+++ L+ L Y FR+ +L AL+ ++RLEFLGDAVLDYL+T +L +
Sbjct: 73 DLKELQEKLGYQFRNKQVLRVALSFHDDNFT-----FRRLEFLGDAVLDYLVTRHLVRSF 127
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI--LHASQELYKWINITVDSFERLSLE 723
P S G ++ A++N + Y+ S++HG H ++ +H ++ ++ V+ R
Sbjct: 128 PDQSAGRHNTIKQATINKEHYSCISIRHGFHVYLQKVHFVPQIAEFAESLVEEHARGKAC 187
Query: 724 STFG 727
STFG
Sbjct: 188 STFG 191
>gi|424776467|ref|ZP_18203448.1| ribonuclease III [Alcaligenes sp. HPC1271]
gi|422888287|gb|EKU30676.1| ribonuclease III [Alcaligenes sp. HPC1271]
Length = 252
Score = 79.0 bits (193), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 30/184 (16%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ + YSF+D LL +ALTH S+ R +RLEFLGD+VL++ + L++++ +
Sbjct: 7 LEAAIGYSFKDTGLLEQALTHRSHS----ARHNERLEFLGDSVLNFTVAALLFDRFQRID 62
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + GL ++ EL F R
Sbjct: 63 EGDLSRLRANLVKQAALAEIATRLGLSDYLRLGEGELKS------GGFRR---------- 106
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM---ITPETMRLQPARELN 786
P L D +E++ GA+F+D+G + I L EPM + P+T+ P L
Sbjct: 107 -----PSILADALEAIFGAVFLDAGFTQAQTV--ITQLYEPMLVDVDPKTLGKDPKTLLQ 159
Query: 787 EYCQ 790
E Q
Sbjct: 160 ELLQ 163
Score = 42.4 bits (98), Expect = 1.2, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + H E LE LGDS L + + LF +Q EG LS + ++ AAL
Sbjct: 20 LLEQALTHRSHSARHNERLEFLGDSVLNFTVAALLFDRFQRIDEGDLSRLRANLVKQAAL 79
Query: 497 CKLGCDHKLPGFIR 510
++ L ++R
Sbjct: 80 AEIATRLGLSDYLR 93
>gi|365174613|ref|ZP_09362054.1| ribonuclease III [Synergistes sp. 3_1_syn1]
gi|363614536|gb|EHL66027.1| ribonuclease III [Synergistes sp. 3_1_syn1]
Length = 230
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+R + L Y F D LL EALTH SY + +RLEFLGDAVL+ + + L++ YP
Sbjct: 11 LRAFQKKLRYQFNDTELLQEALTHSSYANENGVKFNERLEFLGDAVLELVTSDKLFSSYP 70
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
G LT +R+ V + +L + + GL K+++ + L K + DS
Sbjct: 71 DYDEGQLTRLRARIVCKNSLSLWASEMGL-KNLIRIGKSLVK--SGPTDS---------- 117
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE--PMITPETMRLQPARE 784
D +E+L GAIF+D G V E++ L+ P I+ + P E
Sbjct: 118 ----------VAADCVEALFGAIFLDGGFPNAV--EAVSNFLDTKPEISGAAVIKDPKTE 165
Query: 785 LNEYCQKH 792
L EY Q+
Sbjct: 166 LQEYFQRQ 173
>gi|345875651|ref|ZP_08827442.1| ribonuclease III [Neisseria weaveri LMG 5135]
gi|417958288|ref|ZP_12601203.1| ribonuclease III [Neisseria weaveri ATCC 51223]
gi|343966946|gb|EGV35197.1| ribonuclease III [Neisseria weaveri ATCC 51223]
gi|343968726|gb|EGV36950.1| ribonuclease III [Neisseria weaveri LMG 5135]
Length = 239
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 13/132 (9%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
H++ L YSFR+ LLV+ALTH SY + +RLEF+GDAVLDY + L++ +P L
Sbjct: 13 HIQKKLGYSFRNTELLVQALTHRSYS----AKNNERLEFIGDAVLDYTVAKMLFDAFPKL 68
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL----YKWINITVDSFERL---- 720
S G+L+ +RS VN A +++ + + + + EL ++ +I D+ E L
Sbjct: 69 SEGELSRLRSNLVNEAVLADIAIEMNIGEALFLGTGELKSGGFRRPSILADAVEALFAAV 128
Query: 721 SLESTFGWESET 732
SL++ F E+E+
Sbjct: 129 SLDADFS-EAES 139
>gi|62181146|ref|YP_217563.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|375115490|ref|ZP_09760660.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|62128779|gb|AAX66482.1| RNase III, ds RNA [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715636|gb|EFZ07207.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
Length = 245
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 31/247 (12%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+F LL +ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 23 IVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHR 78
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 79 FPRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKS------GGFRRESI-- 130
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L G +F+DS ++++ + L+ I+P + P
Sbjct: 131 -------------LADTMEALIGGVFLDSNIQTVEQLILNWYKTRLDE-ISPGDKQKDPK 176
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASK 839
L EY Q H + + ++ G+A T+ +G + + A++ A++
Sbjct: 177 TRLQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAE 236
Query: 840 EVLKSLK 846
+VLK L+
Sbjct: 237 QVLKKLE 243
>gi|359437628|ref|ZP_09227685.1| ribonuclease III [Pseudoalteromonas sp. BSi20311]
gi|358027670|dbj|GAA63934.1| ribonuclease III [Pseudoalteromonas sp. BSi20311]
Length = 225
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + Y+F D LL +A+TH S+ + +RLEFLGD++L ++I LY K+
Sbjct: 4 NVTELYKRIGYTFADQGLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYAKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A ++ L ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGLEFELGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA+F+DS ++ E++ L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAVFLDSNIDRCGELILAWYESRLDA-ISPGLNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q S+ G+A TVE +G + + + A++ A+++
Sbjct: 158 LLQEYLQARKLSLPGYTVVDTKGQAHNQTFTVECIVDG-MDSIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKILK 222
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 29/150 (19%)
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
T +LE T + +G H E LE LGDS L + + L+ + EG LS + +
Sbjct: 15 TFADQGLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTL 74
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ L + G + +L ++R P + K SG +
Sbjct: 75 VRGQTLAEFGLEFELGDYLRLGPGELK--------SGGFR-------------------- 106
Query: 551 KSKTVADVVEALIGA-FLSTGGENVGLIFL 579
+ T+AD VEA+IGA FL + + G + L
Sbjct: 107 RESTLADAVEAIIGAVFLDSNIDRCGELIL 136
>gi|359783025|ref|ZP_09286243.1| ribonuclease III [Pseudomonas psychrotolerans L19]
gi|359369171|gb|EHK69744.1| ribonuclease III [Pseudomonas psychrotolerans L19]
Length = 229
Score = 79.0 bits (193), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 28/188 (14%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+++ LE L Y+F+DP L++ ALTH S+ R +RLEFLGDA+L+++I LY+
Sbjct: 3 LSLDRLERRLGYTFKDPDLMLLALTHRSFA----GRNNERLEFLGDAILNFIIGEALYDH 58
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P G L+ +R+ V + AL + L ++ S EL F R S+
Sbjct: 59 FPQAREGQLSRLRAKLVKGETLALLARSFELGDYLRLGSGELKS------GGFRRESI-- 110
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L G I++D+G + K+ V + P L + TP P
Sbjct: 111 -------------LADAMEALIGGIYLDAGMDAAKDRVMAWLGPQLREL-TPVDTNKDPK 156
Query: 783 RELNEYCQ 790
L E+ Q
Sbjct: 157 TRLQEFLQ 164
>gi|148925776|ref|ZP_01809464.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845786|gb|EDK22877.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8486]
Length = 229
Score = 79.0 bits (193), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 28/158 (17%)
Query: 599 VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYL 656
+Q + + N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD +
Sbjct: 1 MQGKMMKNIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLV 55
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS 716
+ YL++K+ + GDL+ +R+A VN +A + L IL + E
Sbjct: 56 VGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAE----------- 104
Query: 717 FERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
E+ G E P L D +E++ GAI +++G
Sbjct: 105 ------ENNGGKEK----PSILSDALEAIIGAIHLEAG 132
>gi|407459149|ref|YP_006737252.1| ribonuclease III [Chlamydia psittaci M56]
gi|405785977|gb|AFS24722.1| ribonuclease III [Chlamydia psittaci M56]
Length = 237
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 42/253 (16%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYL 661
L+N++ +E+ LN++F P LLV ALTH SY I +RLEFLGDAVL ++T +L
Sbjct: 4 LINIKEVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHL 63
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ +P++ G L+ R+A +N + GL +++L + ER+
Sbjct: 64 FLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLL-------------IGKGERI- 109
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET----- 776
++E A ++ E++ GA+++D G R + P++ +
Sbjct: 110 -------QNERGRTSAYANLFEAILGAVYLDGG------LAPARQITVPLLPSKKDILPL 156
Query: 777 MRLQPARELNEYCQKHH-----FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKE 831
M P L + QKH + + +P+ G + + V N ++ A + KE
Sbjct: 157 MLGNPKNRLQQLTQKHLRTLPVYQCESWTSPQ--GASGYHIRVIVNNQVWGEGFALSKKE 214
Query: 832 TAKKVASKEVLKS 844
A+K+A+++ L +
Sbjct: 215 -AEKLAAQQALDT 226
>gi|322378529|ref|ZP_08052977.1| ribonuclease III [Helicobacter suis HS1]
gi|321149043|gb|EFX43495.1| ribonuclease III [Helicobacter suis HS1]
Length = 216
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 29/180 (16%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
+ Y F+DP LL +ALTH S + + +RLEFLGDAVLD ++ L+ ++ L GDL
Sbjct: 1 MGYVFKDPLLLQQALTHRS---TKAHKNNERLEFLGDAVLDLVVAEILFTRFTDLQEGDL 57
Query: 674 TDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETS 733
+ MR++ VN + ++ L HIL + E + +
Sbjct: 58 SKMRASLVNEKAFFKLALSLNLQDHILISQAE---------------------ANNNGHT 96
Query: 734 FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE---PMITPETMRLQPARELNEYCQ 790
P L E+L GAI+++SG E++ I+ LL+ P ++P+T+ + L E Q
Sbjct: 97 KPSILSSAFEALMGAIYLESGL--EIIKNLIQDLLDMAYPNLSPKTLFMDYKSALQELTQ 154
>gi|428775122|ref|YP_007166909.1| RNAse III [Halothece sp. PCC 7418]
gi|428689401|gb|AFZ42695.1| RNAse III [Halothece sp. PCC 7418]
Length = 228
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 48/248 (19%)
Query: 618 FRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
F+D L A TH SY PE+ +RLEFLGDAVL +L+ LY KYP + G+L+
Sbjct: 8 FKDIQLWETACTHRSYFNEHPEVQEDNERLEFLGDAVLGFLVGKLLYQKYPQMREGELSR 67
Query: 676 MRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF- 734
+RS VNN+ H L + L ++ +D RL G E E +
Sbjct: 68 LRSRLVNNE--------HQLAEFAL----------SLNLDQHLRLGK----GAEKEGTRQ 105
Query: 735 -PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNE------ 787
P L D +E++ GA F+D+G E++ +EP+ + ++ EL++
Sbjct: 106 NPDVLSDTLEAVIGAYFLDAG------IEAVEQFIEPLFSAIAEQVTATSELDQNYKGQL 159
Query: 788 ------YCQK-HHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKE 840
YC +S+++ + TVEV ++ K+TA+K A+K
Sbjct: 160 QEWALAYCGLIPRYSIRQETGA--DHAKEFTVEVRIGSEVYG-VGVGESKKTAEKRAAKA 216
Query: 841 VLKSLKAS 848
L++ A+
Sbjct: 217 ALEAQNAA 224
>gi|378954079|ref|YP_005211566.1| Ribonuclease III [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|357204690|gb|AET52736.1| Ribonuclease III [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
Length = 245
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 31/247 (12%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+F LL +ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 23 IVINRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHR 78
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 79 FPRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKS------GGFRRESI-- 130
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L G +F+DS ++++ + L+ I+P + P
Sbjct: 131 -------------LADTVEALIGGVFLDSNIQTVEQLILNWYKTRLDE-ISPGDKQKDPK 176
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASK 839
L EY Q H + + ++ G+A T+ +G + + A++ A+
Sbjct: 177 TRLQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAG 236
Query: 840 EVLKSLK 846
+VLK L+
Sbjct: 237 QVLKKLE 243
>gi|406940754|gb|EKD73426.1| hypothetical protein ACD_45C00321G0009 [uncultured bacterium]
Length = 220
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 37/246 (15%)
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
+ L + Y F DP LL ALTH S +RLEFLGD++++++I L+ +YP
Sbjct: 4 KELSRKIGYHFNDPRLLKIALTHRS----SGEDNNERLEFLGDSIVNFVIAEILFQQYPA 59
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG 727
GDL+ R+ +N + + + L +++ EL ER+S+
Sbjct: 60 AQEGDLSRWRATLINRETLGILGRQFELGRYLYLGMGEL------KSGGSERMSI----- 108
Query: 728 WESETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLEPMITPETMRLQPAREL 785
L +E++ GAI++D G E + +PLL ++ + + P +L
Sbjct: 109 ----------LSCAMEAIVGAIYLDGGFLAVHEAILSWYQPLLNSLMLAASHK-DPKTQL 157
Query: 786 NEYCQKHHFSMKKTVAPRINGKA-----AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
EY Q+HH S+ + G+A V+ V L K T + A++ A++
Sbjct: 158 QEYLQRHHLSLPVYEVEALEGEAHQQTFVVSCTVQDQKVLGKGT----SRRRAEQAAAEN 213
Query: 841 VLKSLK 846
+L+ +K
Sbjct: 214 MLEIIK 219
>gi|315127397|ref|YP_004069400.1| RNase III, ds RNA [Pseudoalteromonas sp. SM9913]
gi|359445973|ref|ZP_09235683.1| ribonuclease III [Pseudoalteromonas sp. BSi20439]
gi|392553972|ref|ZP_10301109.1| RNase III, ds RNA [Pseudoalteromonas undina NCIMB 2128]
gi|315015911|gb|ADT69249.1| RNase III, ds RNA [Pseudoalteromonas sp. SM9913]
gi|358040171|dbj|GAA71932.1| ribonuclease III [Pseudoalteromonas sp. BSi20439]
Length = 225
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + Y+F D LL +A+TH S+ + +RLEFLGD++L ++I LY K+
Sbjct: 4 NVTELYKRIGYTFADQGLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYAKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A ++ L ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGLEFELGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA+F+DS ++ E++ L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAVFLDSDIDRCGELILAWYESRLDA-ISPGLNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q S+ G+A TVE +G + + + A++ A+++
Sbjct: 158 LLQEYLQARKLSLPGYTVVDTKGQAHNQTFTVECIVDG-MDSIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKILK 222
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 29/150 (19%)
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
T +LE T + +G H E LE LGDS L + + L+ + EG LS + +
Sbjct: 15 TFADQGLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTL 74
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ L + G + +L ++R P + K SG +
Sbjct: 75 VRGQTLAEFGLEFELGDYLRLGPGELK--------SGGFR-------------------- 106
Query: 551 KSKTVADVVEALIGA-FLSTGGENVGLIFL 579
+ T+AD VEA+IGA FL + + G + L
Sbjct: 107 RESTLADAVEAIIGAVFLDSDIDRCGELIL 136
>gi|304413540|ref|ZP_07395013.1| ribonuclease III [Candidatus Regiella insecticola LSR1]
gi|304284383|gb|EFL92776.1| ribonuclease III [Candidatus Regiella insecticola LSR1]
Length = 235
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY-QRLEFLGDAVLDYLITVYLYN 663
+ ++ LE+ L Y+F+ +LLV+ALTH S R + +RLEFLGDA+L++ I LY
Sbjct: 4 IIIKKLETRLGYAFKQRALLVQALTHRS-----ASRTHNERLEFLGDAILNFFIAKALYQ 58
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
++ ++ GD++ MR+ V A + + L ++ EL
Sbjct: 59 RFSDINEGDMSRMRATLVRGKTLAEIAHEFDLSDYLYLGKGELKN--------------- 103
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCN-KEVVFESIRPLLEPMITPETMRLQPA 782
++ L D +E+L G IF+DS E + + I+P + P
Sbjct: 104 ------GKSPRESILADTVEALIGGIFLDSDIQTTERLLLTWYEKRLAEISPGEKQKDPK 157
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q HH + + +++G+A
Sbjct: 158 TRLQEYLQSHHLPLPSYLVTQVHGEA 183
>gi|297343244|pdb|3N3W|A Chain A, 2.2 Angstrom Resolution Crystal Structure Of Nuclease
Domain Ribonuclase Iii (Rnc) From Campylobacter Jejuni
gi|297343245|pdb|3N3W|B Chain B, 2.2 Angstrom Resolution Crystal Structure Of Nuclease
Domain Ribonuclase Iii (Rnc) From Campylobacter Jejuni
Length = 248
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 28/157 (17%)
Query: 600 QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLI 657
Q+ + N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++
Sbjct: 21 QSNAMKNIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVV 75
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
YL++K+ + GDL+ +R+A VN +A + L IL + E
Sbjct: 76 GEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAE------------ 123
Query: 718 ERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
E+ G E P L D +E++ GAI +++G
Sbjct: 124 -----ENNGGKEK----PSILSDALEAIIGAIHLEAG 151
>gi|329942692|ref|ZP_08291471.1| ribonuclease III [Chlamydophila psittaci Cal10]
gi|332287287|ref|YP_004422188.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|384450439|ref|YP_005663039.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|384451441|ref|YP_005664039.1| ribonuclease III [Chlamydophila psittaci 01DC11]
gi|384452414|ref|YP_005665011.1| ribonuclease III [Chlamydophila psittaci 08DC60]
gi|384453390|ref|YP_005665986.1| ribonuclease III [Chlamydophila psittaci C19/98]
gi|384454369|ref|YP_005666964.1| ribonuclease III [Chlamydophila psittaci 02DC15]
gi|392376528|ref|YP_004064306.1| ribonuclease III [Chlamydophila psittaci RD1]
gi|406593278|ref|YP_006740457.1| ribonuclease III [Chlamydia psittaci NJ1]
gi|407456552|ref|YP_006735125.1| ribonuclease III [Chlamydia psittaci VS225]
gi|407460523|ref|YP_006738298.1| ribonuclease III [Chlamydia psittaci WC]
gi|313847871|emb|CBY16866.1| ribonuclease III [Chlamydophila psittaci RD1]
gi|325506653|gb|ADZ18291.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|328814952|gb|EGF84941.1| ribonuclease III [Chlamydophila psittaci Cal10]
gi|328914533|gb|AEB55366.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|334692171|gb|AEG85390.1| ribonuclease III [Chlamydophila psittaci C19/98]
gi|334693151|gb|AEG86369.1| ribonuclease III [Chlamydophila psittaci 01DC11]
gi|334694126|gb|AEG87343.1| ribonuclease III [Chlamydophila psittaci 02DC15]
gi|334695103|gb|AEG88319.1| ribonuclease III [Chlamydophila psittaci 08DC60]
gi|405783813|gb|AFS22560.1| ribonuclease III [Chlamydia psittaci VS225]
gi|405787528|gb|AFS26272.1| ribonuclease III [Chlamydia psittaci WC]
gi|405789150|gb|AFS27892.1| ribonuclease III [Chlamydia psittaci NJ1]
Length = 237
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 42/253 (16%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYL 661
L+N++ +E+ LN++F P LLV ALTH SY I +RLEFLGDAVL ++T +L
Sbjct: 4 LINIKEVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHL 63
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ +P++ G L+ R+A +N + GL +++L + ER+
Sbjct: 64 FLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLL-------------IGKGERI- 109
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET----- 776
++E A ++ E++ GA+++D G R + P++ +
Sbjct: 110 -------QNERGRTSAYANLFEAILGAVYLDGG------LAPARQITVPLLPSKKDILPL 156
Query: 777 MRLQPARELNEYCQKHH-----FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKE 831
M P L + QKH + + +P+ G + + V N ++ A + KE
Sbjct: 157 MLGNPKNRLQQLTQKHLRTLPVYQCESWTSPQ--GASGYHIRVIVNNEVWGEGFALSKKE 214
Query: 832 TAKKVASKEVLKS 844
A+K+A+++ L +
Sbjct: 215 -AEKLAAQQALDT 226
>gi|237748853|ref|ZP_04579333.1| ribonuclease III [Oxalobacter formigenes OXCC13]
gi|229380215|gb|EEO30306.1| ribonuclease III [Oxalobacter formigenes OXCC13]
Length = 277
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 58/270 (21%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
++NV L+ + YSFR LL ALTH S+ +RLEFLGD++L+ + + LY
Sbjct: 11 MMNVNVLQERIGYSFRQIDLLQTALTHRSFS----SHHNERLEFLGDSLLNCVTAINLYE 66
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWIN-ITVDSFERLSL 722
+Y L+ G+L+ +RS+ V Q LY+ + + SF RL
Sbjct: 67 RYVELNEGNLSRLRSSLVRQ--------------------QALYEIAQKLDMSSFLRLGE 106
Query: 723 ESTFGWESETSF--PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT------- 773
G F P L D +E+L GAIF+DS FE++R ++ + T
Sbjct: 107 ----GELKAGGFKRPSILADAMEALFGAIFLDSD------FETVRRVITQLFTDMMKGLD 156
Query: 774 PETMRLQPARELNEYCQKHHFSMKKTVAPRINGKA---AVTVE-------VHANGTLFKH 823
PET +L EY Q H ++ + +G A +E +H GT
Sbjct: 157 PETFGKDAKTQLQEYLQGHKLALPEYQVVATHGAAHNQEFEIECTIGKFGIHVFGT--GS 214
Query: 824 THADADKETAKK--VASKEVLKSLKASFPG 851
+ ++E A+K VA +E +K+ K G
Sbjct: 215 SRRAGEQEAAQKALVAVEEAMKNKKQVSSG 244
>gi|228992577|ref|ZP_04152504.1| Ribonuclease 3 [Bacillus pseudomycoides DSM 12442]
gi|228998625|ref|ZP_04158212.1| Ribonuclease 3 [Bacillus mycoides Rock3-17]
gi|229006125|ref|ZP_04163813.1| Ribonuclease 3 [Bacillus mycoides Rock1-4]
gi|228755201|gb|EEM04558.1| Ribonuclease 3 [Bacillus mycoides Rock1-4]
gi|228761093|gb|EEM10052.1| Ribonuclease 3 [Bacillus mycoides Rock3-17]
gi|228767211|gb|EEM15847.1| Ribonuclease 3 [Bacillus pseudomycoides DSM 12442]
Length = 245
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 46/248 (18%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ +F D LL++A TH SY+ + ++ RLEFLGDAVL+ ++ YL+ KYPT+S
Sbjct: 26 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSE 85
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-----EST 725
G+LT +R+A V C ++ + EL SF L L E T
Sbjct: 86 GELTKLRAAVV---C----------EPSLVRFANEL---------SFGNLVLLGKGEEMT 123
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR--LQPAR 783
G E P L D+ E+ GA+++D G E V+E ++ ++ P I +
Sbjct: 124 GGRER----PALLADVFEAFIGALYLDQGL--ETVWEFLKEIVYPKINEGAFSHVMDYKS 177
Query: 784 ELNEYCQKH-----HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
+L E Q+ + + + P N + V + NG + KE ++ AS
Sbjct: 178 QLQELIQRDGSGNIEYQILQEKGPAHNREFVSRVTL--NGVALGLGSGKSKKEAEQQAAS 235
Query: 839 KEVLKSLK 846
E LK LK
Sbjct: 236 -EALKKLK 242
>gi|119471905|ref|ZP_01614213.1| RNase III, ds RNA [Alteromonadales bacterium TW-7]
gi|392536909|ref|ZP_10284046.1| RNase III, ds RNA [Pseudoalteromonas marina mano4]
gi|119445278|gb|EAW26568.1| RNase III, ds RNA [Alteromonadales bacterium TW-7]
Length = 225
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + + Y F D LL +A+TH S+ + +RLEFLGD++L ++I LY K+
Sbjct: 4 NVTELYNKIGYEFSDQGLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYAKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A V+ GL ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGVEFGLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA F+DSG + E++ L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAAFLDSGIERCSELILSWYESRLDA-ISPGLNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L E+ Q + G+A TVE +G + + + A++ A+++
Sbjct: 158 LLQEHLQGRKLPLPGYTVVDTKGQAHNQTFTVECIVDG-MDSIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK +K
Sbjct: 217 ALKIIK 222
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L+ + EG LS + ++ L
Sbjct: 21 LLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG + + T+A
Sbjct: 81 AEFGVEFGLGDYLRLGPGELK--------SGGFR--------------------RESTLA 112
Query: 557 DVVEALIG-AFLSTGGENVGLIFLDRIGIKVDFVN 590
D VEA+IG AFL +G E + L ++D ++
Sbjct: 113 DAVEAIIGAAFLDSGIERCSELILSWYESRLDAIS 147
>gi|194014593|ref|ZP_03053210.1| ribonuclease III [Bacillus pumilus ATCC 7061]
gi|194013619|gb|EDW23184.1| ribonuclease III [Bacillus pumilus ATCC 7061]
Length = 247
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 42/187 (22%)
Query: 598 QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLD 654
Q Q+++L R + ++ F++ LL +A TH SY+ + Y+ RLEFLGDAVL+
Sbjct: 9 QKQSKKLEQFREFQQRISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLE 68
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINIT 713
I+ +L+ KYP +S GDLT +R+A V C +L S+ H L
Sbjct: 69 LTISQFLFAKYPAMSEGDLTKLRAAIV---CEPSLVSLAHEL------------------ 107
Query: 714 VDSFERLSL-----ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
SF L L E T G + P L D+ E+ GA+++D G E + L
Sbjct: 108 --SFGDLVLLGKGEEMTGGRKR----PALLADVFEAFIGALYLDQGL------EPVERFL 155
Query: 769 EPMITPE 775
E + P+
Sbjct: 156 EAYVYPK 162
>gi|242309254|ref|ZP_04808409.1| ribonuclease 3 [Helicobacter pullorum MIT 98-5489]
gi|239524295|gb|EEQ64161.1| ribonuclease 3 [Helicobacter pullorum MIT 98-5489]
Length = 224
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 111/248 (44%), Gaps = 30/248 (12%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++ H + L Y F++ +LL EALTH S + +RLEFLGDAVLD +I +LY K
Sbjct: 1 MDFNHFQQTLGYHFKNQNLLKEALTHKS---AKKSTHNERLEFLGDAVLDLIIGEFLYKK 57
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P+ G+L+ MR++ VN +A ++ +++ I F S E
Sbjct: 58 FPSSPEGELSKMRASMVNEKAFA-----------------KIARYLGIGEYLFISHSEEQ 100
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQPAR 783
G + ++ L + E++ GAI+++SG K + + I +L P I + +
Sbjct: 101 NHGRDKDS----ILSNAFEAIIGAIYLESGLEKVQKIVLKILEILYPKIDIQHLFYDHKT 156
Query: 784 ELNEYCQKHHFSMKKTVAPRING---KAAVTVEVHANGTLFKHTHADADKETAKKVA--S 838
L E Q + + V G + V G + H + KE + A +
Sbjct: 157 SLQELTQALFGVIPEYVVLDSKGPDHNKEFLIGVFIQGKEYAHASGKSKKEAQQNCAKIA 216
Query: 839 KEVLKSLK 846
E+LK K
Sbjct: 217 LEILKETK 224
>gi|384449689|ref|YP_005662291.1| ribonuclease III [Chlamydophila pneumoniae LPCoLN]
gi|269302927|gb|ACZ33027.1| ribonuclease III [Chlamydophila pneumoniae LPCoLN]
Length = 237
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITVYLY 662
+++ +E+ LN++F P LL ALTH SY + +RLEFLGDAVL ++T +L+
Sbjct: 5 IDITAIEAKLNFTFTQPKLLEIALTHPSYKNESAVQIEDSERLEFLGDAVLGLIVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P++ G L+ R++ VN + G+ ++L + E++
Sbjct: 65 LLFPSMDEGTLSTARASLVNAKACCRYTTTLGIGDYLL-------------IGKGEKI-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET-----M 777
+SE A ++ ES+ GA+++D G R L P++ P M
Sbjct: 110 ------QSERGRLSAYANLFESILGAVYLDGG------LSPARKLTVPLLPPREEILPLM 157
Query: 778 RLQPARELNEYCQKHHFSM---KKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
P L ++ QK + + T G + ++V N ++ +A + KE A+
Sbjct: 158 SGNPKNLLQQFTQKQFRVLPVYQSTAVTDAQGNVSYQIQVLVNQEVWGEGNASSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+++ L +
Sbjct: 217 KIAAQQALDT 226
>gi|238920905|ref|YP_002934420.1| ribonuclease III, putative [Edwardsiella ictaluri 93-146]
gi|259491900|sp|C5B8Y2.1|RNC_EDWI9 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|238870474|gb|ACR70185.1| ribonuclease III, putative [Edwardsiella ictaluri 93-146]
Length = 226
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+FR LL++ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 4 IVINRLQRKLGYTFRQHDLLMQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHR 59
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 60 FPRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKS------GGFRRESI-- 111
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L G IF+DS + ++ + R LE I+P + P
Sbjct: 112 -------------LADTVEALIGGIFLDSDIQTIERLILDWYRSRLEE-ISPGDKQKDPK 157
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA 808
L E+ Q H + + ++ G+A
Sbjct: 158 TRLQEFLQGRHLPLPSYLVVQVRGEA 183
>gi|291550077|emb|CBL26339.1| RNAse III [Ruminococcus torques L2-14]
Length = 228
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 24/151 (15%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR---CYQRLEFLGDAVLDYLITVYLYN 663
V+ LE + Y F+D SL+ AL H SY + + C +RLEFLGDAVL+ + + YL+N
Sbjct: 4 VKELEQKIGYVFKDKSLIERALMHSSYTNEKHLKKYECNERLEFLGDAVLELVSSAYLFN 63
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
++P +S G+LT R++ V A+ + GL ++L E E
Sbjct: 64 EFPKVSEGELTKTRASMVCEPSLAMCARDIGLGDYLLLGKGE-----------------E 106
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+T G + ++ D +E+L GAI++D G
Sbjct: 107 ATGGRKRDS----ITSDAMEALIGAIYLDGG 133
>gi|52424423|ref|YP_087560.1| ribonuclease III [Mannheimia succiniciproducens MBEL55E]
gi|81387548|sp|Q65VN5.1|RNC_MANSM RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|52306475|gb|AAU36975.1| Rnc protein [Mannheimia succiniciproducens MBEL55E]
Length = 224
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 31/242 (12%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L+ ++Y F+D +LL +ALTH S + +RLEFLGDA+L+Y I LY+++P +
Sbjct: 7 LQRQISYEFKDITLLKQALTHRSAA----TKHNERLEFLGDAILNYTIADALYHQFPKCN 62
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G+L+ MR+ V A+ + + L +++ EL F R S+
Sbjct: 63 EGELSRMRATLVREPTLAILARQFKLGEYMALGHGEL------KSGGFRRESI------- 109
Query: 730 SETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
L D +E++ GAI +DS ++ LL I P + P L E
Sbjct: 110 --------LADCVEAIIGAISLDSSLVSATQITLHWYEKLLRE-IKPGENQKDPKTRLQE 160
Query: 788 YCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
Y Q H ++ I G+A T+E H + + A++ A++++L +
Sbjct: 161 YLQGHRLALPTYDVKDIKGEAHCQTFTIECHVPNLDRTFIGVGSSRRKAEQAAAEQILTA 220
Query: 845 LK 846
L+
Sbjct: 221 LE 222
>gi|90101642|sp|Q57LD0.2|RNC_SALCH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
Length = 226
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 31/245 (12%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y+F LL +ALTH S + +RLEFLGD++L ++I LY+++P
Sbjct: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G +F+DS ++++ + L+ I+P + P
Sbjct: 112 -----------LADTMEALIGGVFLDSNIQTVEQLILNWYKTRLDE-ISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEV 841
L EY Q H + + ++ G+A T+ +G + + A++ A+++V
Sbjct: 160 LQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQV 219
Query: 842 LKSLK 846
LK L+
Sbjct: 220 LKKLE 224
>gi|438145311|ref|ZP_20875795.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434938853|gb|ELL45754.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
Length = 226
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 31/245 (12%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y+F LL +ALTH S + +RLEFLGD++L ++I LY+++P
Sbjct: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G +F+DS ++++ + L+ I+P + P
Sbjct: 112 -----------LADTVEALIGGVFLDSNIQTVEQLILNWYKTRLDE-ISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEV 841
L EY Q H + + ++ G+A T+ +G + + A++ A+ +V
Sbjct: 160 LQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAGQV 219
Query: 842 LKSLK 846
LK L+
Sbjct: 220 LKKLE 224
>gi|387886426|ref|YP_006316725.1| ribonuclease III [Francisella noatunensis subsp. orientalis str.
Toba 04]
gi|386871242|gb|AFJ43249.1| ribonuclease III [Francisella noatunensis subsp. orientalis str.
Toba 04]
Length = 232
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 45/242 (18%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L +L YSF++ +LLV ALTH S + + Y+RLEFLGD++L ++I LY ++P L
Sbjct: 7 RLYKILGYSFKNYTLLVRALTHRS----KTKKNYERLEFLGDSILGFVIAEVLYLEFPGL 62
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ G L+ +RS V A ++ L ++I+ + E G
Sbjct: 63 AEGKLSQIRSKLVKGVTLANLALNFKLDEYIILGASE-------------------QGGH 103
Query: 729 ESETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPARELN 786
+ E K L D+ E++ GAI++DS K+VV +PL+ + + +L
Sbjct: 104 KRE----KILEDVFEAIIGAIYLDSDFATVKKVVLSWYKPLISTLDLDDVRVKDSKSKLQ 159
Query: 787 EYCQKHHFSMKKTVAPRINGK------------AAVTVEVHANGTLFKHTHADADKETAK 834
E ++ S+ + I+GK + +EV A GT + A+++ A+
Sbjct: 160 EILLQNGLSLPEYSIETIDGKDHEQEFTVKALSIDLNIEVSAKGT----SRKKAEQKAAE 215
Query: 835 KV 836
K+
Sbjct: 216 KM 217
>gi|307448395|pdb|3O2R|A Chain A, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
gi|307448397|pdb|3O2R|C Chain C, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
Length = 170
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 28/157 (17%)
Query: 600 QAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLI 657
Q+ + N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++
Sbjct: 21 QSNAMKNIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVV 75
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
YL++K+ + GDL+ +R+A VN +A + L IL + E
Sbjct: 76 GEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAE------------ 123
Query: 718 ERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
E+ G E P L D +E++ GAI +++G
Sbjct: 124 -----ENNGGKEK----PSILSDALEAIIGAIHLEAG 151
>gi|410962933|ref|XP_003988023.1| PREDICTED: endoribonuclease Dicer [Felis catus]
Length = 1893
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 140/359 (38%), Gaps = 84/359 (23%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1556 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPARENFNSQ 1615
Query: 601 AERLVNVR----------------------------------------------HLESLL 614
+ L R + E +
Sbjct: 1616 QKALSGSRAAASVAGPRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1675
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY Y + L Y +L ++ ++
Sbjct: 1676 NYRFKNKAYLLQAFTHASYH-------YNTITGREGGFLAY----WLASRVAVVT----Q 1720
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSF 734
+ R + Y L S E Y + R + E +
Sbjct: 1721 EWRGRAAE---YTLRSGARARGARAKSTLCESYTGAELGEHGLRRSEEDEEK--EEDIEV 1775
Query: 735 PKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKH 792
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + + P REL E +
Sbjct: 1776 PKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE- 1834
Query: 793 HFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
+ K + A R +GK VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1835 --TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1888
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1386
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1295 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1347
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1348 MRSKKVSN 1355
>gi|311104757|ref|YP_003977610.1| ribonuclease III [Achromobacter xylosoxidans A8]
gi|310759446|gb|ADP14895.1| ribonuclease III [Achromobacter xylosoxidans A8]
Length = 253
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 28/189 (14%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L++ F DP+LL +ALTH S+ R +RLEFLGD+VL++++ L+ +Y +
Sbjct: 6 LENRLDHHFSDPALLEQALTHRSHG----ARHNERLEFLGDSVLNFVVAAMLFERYSKID 61
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + L +++ EL F R
Sbjct: 62 EGDLSRLRANLVKQASLADIAQRLELSQYLRLGEGELKS------GGFRR---------- 105
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E+L GA+F+D+G + + V+ +P+L + P+T+ L E
Sbjct: 106 -----PSILADTVEALFGAVFLDAGFDAARRVIVRQYQPVLAS-VDPKTLGKDAKTLLQE 159
Query: 788 YCQKHHFSM 796
+ Q ++
Sbjct: 160 FLQGRKLAL 168
Score = 41.2 bits (95), Expect = 2.3, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 29/135 (21%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + H E LE LGDS L + + LF+ Y EG LS + ++ A+L
Sbjct: 19 LLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYSKIDEGDLSRLRANLVKQASL 78
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ +L ++R + K SG + + +A
Sbjct: 79 ADIAQRLELSQYLRLGEGELK--------SGGFR--------------------RPSILA 110
Query: 557 DVVEALIGA-FLSTG 570
D VEAL GA FL G
Sbjct: 111 DTVEALFGAVFLDAG 125
>gi|197285743|ref|YP_002151615.1| ribonuclease III [Proteus mirabilis HI4320]
gi|425068680|ref|ZP_18471796.1| ribonuclease 3 [Proteus mirabilis WGLW6]
gi|425071798|ref|ZP_18474904.1| ribonuclease 3 [Proteus mirabilis WGLW4]
gi|238693201|sp|B4F047.1|RNC_PROMH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|194683230|emb|CAR43912.1| RNase III, ds RNA [Proteus mirabilis HI4320]
gi|404598167|gb|EKA98653.1| ribonuclease 3 [Proteus mirabilis WGLW4]
gi|404599059|gb|EKA99521.1| ribonuclease 3 [Proteus mirabilis WGLW6]
Length = 226
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
V L+ L Y+F+ LL++ALTH S + +RLEFLGD++L Y+I LY+++P
Sbjct: 6 VNQLQKKLGYTFKQNELLLQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L GAIF+DS + ++ + L I+P + P
Sbjct: 112 -----------LADTVEALIGAIFLDSDIQNIENIILKWYENRLAE-ISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q H + V ++ G+A
Sbjct: 160 LQEYLQGRHLPLPSYVVVQVRGEA 183
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 420 NMLLDHCMQ---NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
N LL + +Q T +++L T + H E LE LGDS L Y + L+ +
Sbjct: 2 NTLLVNQLQKKLGYTFKQNELLLQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
EG +S + ++ L +L + +L +R P + K SG +
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK--------SGGFR------ 107
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFL 579
+ +AD VEALIGA FL + +N+ I L
Sbjct: 108 --------------RESILADTVEALIGAIFLDSDIQNIENIIL 137
>gi|15617978|ref|NP_224262.1| ribonuclease III [Chlamydophila pneumoniae CWL029]
gi|15835590|ref|NP_300114.1| ribonuclease III [Chlamydophila pneumoniae J138]
gi|16752990|ref|NP_445263.1| ribonuclease III [Chlamydophila pneumoniae AR39]
gi|7531191|sp|Q9Z9C7.1|RNC_CHLPN RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|4376309|gb|AAD18207.1| Ribonuclease III [Chlamydophila pneumoniae CWL029]
gi|7189635|gb|AAF38526.1| ribonuclease III [Chlamydophila pneumoniae AR39]
gi|8978428|dbj|BAA98265.1| ribonuclease III [Chlamydophila pneumoniae J138]
Length = 237
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITVYLY 662
+++ +E+ LN++F P LL ALTH SY + +RLEFLGDAVL ++T +L+
Sbjct: 5 IDITAIEAKLNFTFTQPKLLEIALTHPSYKNESAVQIEDSERLEFLGDAVLGLIVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P++ G L+ R++ VN + G+ ++L + E++
Sbjct: 65 LLFPSMDEGTLSTARASLVNAKACCRYTTMLGIGDYLL-------------IGKGEKI-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET-----M 777
+SE A ++ ES+ GA+++D G R L P++ P M
Sbjct: 110 ------QSERGRLSAYANLFESILGAVYLDGG------LSPARKLTVPLLPPREEILPLM 157
Query: 778 RLQPARELNEYCQKHHFSM---KKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
P L ++ QK + + T G + ++V N ++ +A + KE A+
Sbjct: 158 SGNPKNLLQQFTQKQFRVLPVYQSTAVTDAQGNVSYQIQVLVNQEVWGEGNASSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+++ L +
Sbjct: 217 KIAAQQALDT 226
>gi|407455171|ref|YP_006734062.1| ribonuclease III [Chlamydia psittaci GR9]
gi|407457904|ref|YP_006736209.1| ribonuclease III [Chlamydia psittaci WS/RT/E30]
gi|405781714|gb|AFS20463.1| ribonuclease III [Chlamydia psittaci GR9]
gi|405785349|gb|AFS24095.1| ribonuclease III [Chlamydia psittaci WS/RT/E30]
Length = 237
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 42/253 (16%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYL 661
L+N++ +E+ LN++F P LLV ALTH SY I +RLEFLGDAVL ++T +L
Sbjct: 4 LINIKEVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHL 63
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ +P++ G L+ R+A +N + GL +++L + ER+
Sbjct: 64 FLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLL-------------IGKGERI- 109
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET----- 776
+E A ++ E++ GA+++D G R + P++ +
Sbjct: 110 -------RNERGRTSAYANLFEAILGAVYLDGG------LAPARQITVPLLPSKKDILPL 156
Query: 777 MRLQPARELNEYCQKHH-----FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKE 831
M P L + QKH + + +P+ G + + V N ++ A + KE
Sbjct: 157 MLGNPKNRLQQLTQKHLRTLPVYQCESWTSPQ--GASGYHIRVIVNNEVWGEGFALSKKE 214
Query: 832 TAKKVASKEVLKS 844
A+K+A+++ L +
Sbjct: 215 -AEKLAAQQALDT 226
>gi|395238267|ref|ZP_10416204.1| Ribonuclease III [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477839|emb|CCI86181.1| Ribonuclease III [Lactobacillus gigeriorum CRBIP 24.85]
Length = 227
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 23/151 (15%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++ L+ +F++ LL EA TH SY P+ R Y++LEFLGDAVL+ I+ YLY
Sbjct: 7 IKRLDQKYGITFKNIELLEEAFTHSSYANEHPDQARDYEKLEFLGDAVLELAISDYLYRH 66
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
YP L+ G+LT MRS V + ++ +++ G I L K E
Sbjct: 67 YPNLNEGELTRMRSNIVRTEGFSEFAIECGFQNEI-----NLGKG-------------EE 108
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGC 755
G S + L D+ E+ +GA+F+D G
Sbjct: 109 KAGSRSRKTL---LEDVFEAFNGALFLDQGL 136
>gi|392541348|ref|ZP_10288485.1| RNase III, ds RNA [Pseudoalteromonas piscicida JCM 20779]
gi|409202181|ref|ZP_11230384.1| RNase III, ds RNA [Pseudoalteromonas flavipulchra JG1]
Length = 225
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + + Y+F D +LL +ALTH S+ + +RLEFLGD++L ++I LY+K+
Sbjct: 4 NVEELYNKIGYNFSDKALLEQALTHRSHK----GQHNERLEFLGDSILSFVIANALYHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A V+ L ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGVEFALGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA+F+DS + +++V L I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAVFLDSDIDVCRDLVLSWYESRL-TAISPGHNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + G+A TVE G + + + A++ A+++
Sbjct: 158 LLQEYLQARKLPLPGYTVIDTKGQAHNQTFTVECIVEG-MESIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKILK 222
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 28/129 (21%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L+ + EG LS + ++ L
Sbjct: 21 LLEQALTHRSHKGQHNERLEFLGDSILSFVIANALYHKFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG + + T+A
Sbjct: 81 AEFGVEFALGDYLRLGPGELK--------SGGFR--------------------RESTLA 112
Query: 557 DVVEALIGA 565
D VEA+IGA
Sbjct: 113 DAVEAIIGA 121
>gi|406592185|ref|YP_006739365.1| ribonuclease III [Chlamydia psittaci CP3]
gi|406594411|ref|YP_006741496.1| ribonuclease III [Chlamydia psittaci MN]
gi|410858312|ref|YP_006974252.1| ribonuclease III [Chlamydia psittaci 01DC12]
gi|405782843|gb|AFS21591.1| ribonuclease III [Chlamydia psittaci MN]
gi|405788057|gb|AFS26800.1| ribonuclease III [Chlamydia psittaci CP3]
gi|410811207|emb|CCO01852.1| ribonuclease III [Chlamydia psittaci 01DC12]
Length = 237
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 42/253 (16%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYL 661
L+N++ +E+ LN++F P LLV ALTH SY I +RLEFLGDAVL ++T +L
Sbjct: 4 LINIKEVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHL 63
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ +P++ G L+ R+A +N + GL +++L + ER+
Sbjct: 64 FLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLL-------------IGKGERI- 109
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET----- 776
++E A ++ E++ GA+++D G R + P++
Sbjct: 110 -------QNERGRTSAYANLFEAILGAVYLDGG------LAPARQITVPLLPSNKDILPL 156
Query: 777 MRLQPARELNEYCQKHH-----FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKE 831
M P L + QKH + +P+ G + + V N ++ A + KE
Sbjct: 157 MLGNPKNRLQQLTQKHLRTLPVYQCDSWTSPQ--GASGYHIRVIVNNEVWGEGFALSKKE 214
Query: 832 TAKKVASKEVLKS 844
A+K+A+++ L +
Sbjct: 215 -AEKLAAQQALDT 226
>gi|260913782|ref|ZP_05920258.1| ribonuclease III [Pasteurella dagmatis ATCC 43325]
gi|260632321|gb|EEX50496.1| ribonuclease III [Pasteurella dagmatis ATCC 43325]
Length = 225
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ L+ L YSF SLL +ALTH S + +RLEFLGDA+L+ I LY+++
Sbjct: 4 NLERLQRKLGYSFNQVSLLEQALTHRSASINH----NERLEFLGDAILNLTIAEALYHQF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P + G+L+ MR+ V A+ + K L ++ EL F R S+
Sbjct: 60 PKCNEGELSRMRATLVREPTLAILARKFELGDYLSLGPGEL------KSGGFRRESI--- 110
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
L D +E++ GAI +DS K ++V + LLE I P + P
Sbjct: 111 ------------LADCVEAIIGAISLDSNLPKTSKIVCNWYKSLLEE-IKPGDNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + I G+A TVE + A + A++ A+++
Sbjct: 158 RLQEYLQGKRLPLPNYNVVDIKGEAHCQTFTVECYVKNIDRTFIGIGASRRKAEQAAAEK 217
Query: 841 VLKSLK 846
+L+ L+
Sbjct: 218 ILQLLE 223
>gi|33241390|ref|NP_876331.1| ribonuclease III [Chlamydophila pneumoniae TW-183]
gi|33235898|gb|AAP97988.1| ribonuclease III [Chlamydophila pneumoniae TW-183]
Length = 237
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITVYLY 662
+++ +E+ LN++F P LL ALTH SY + +RLEFLGDAVL ++T +L+
Sbjct: 5 IDITAIEAKLNFTFTQPKLLEIALTHPSYKNESAVQIEDSERLEFLGDAVLGLIVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P++ G L+ R++ VN + G+ ++L + E++
Sbjct: 65 LLFPSMDEGTLSTARASLVNAKACCRYTTVLGIGDYLL-------------IGKGEKI-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET-----M 777
+SE A ++ ES+ GA+++D G + R L P++ P M
Sbjct: 110 ------QSERGRLSAYANLFESILGAVYLDGGLSPA------RKLTVPLLPPREEILPLM 157
Query: 778 RLQPARELNEYCQKHHFSM---KKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
P L ++ QK + + T G + ++V N ++ +A + KE A+
Sbjct: 158 SGNPKNLLQQFTQKQFRVLPVYQSTAVTDAQGNVSYQIQVLVNQEVWGEGNASSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+++ L +
Sbjct: 217 KIAAQQALDT 226
>gi|90101637|sp|Q3IDL2.2|RNC_PSEHT RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
Length = 225
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L ++Y F D LL +A+TH S+ + +RLEFLGD++L ++I LY K+
Sbjct: 4 NVTELYKTIDYIFADQGLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYAKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A ++ GL ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA+F+DS + E++ L I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAVFLDSDIERCGELILSWYEERLNA-ISPGLNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L E+ Q S+ G+A TVE +G + + + A++ A+++
Sbjct: 158 LLQEHLQARKLSLPGYTVVDTKGQAHNQTFTVECIVDG-MDSIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKILK 222
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L+ + EG LS + ++ L
Sbjct: 21 LLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG + + T+A
Sbjct: 81 AEFGLEFGLGDYLRLGPGELK--------SGGFR--------------------RESTLA 112
Query: 557 DVVEALIGA-FLSTGGENVGLIFL 579
D VEA+IGA FL + E G + L
Sbjct: 113 DAVEAIIGAVFLDSDIERCGELIL 136
>gi|317049180|ref|YP_004116828.1| ribonuclease III [Pantoea sp. At-9b]
gi|316950797|gb|ADU70272.1| ribonuclease III [Pantoea sp. At-9b]
Length = 226
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y+F P LL +ALTH S + +RLEFLGD++L Y+I LY+++P
Sbjct: 6 INKLQRKLGYTFTHPELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G IF+DS ++++ + + LE I+P + P
Sbjct: 112 -----------LADTVEALIGGIFLDSNIQNVEKLILDWYQTRLE-QISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L E+ Q H + + ++ G+A
Sbjct: 160 LQEFLQGRHLPLPSYLVVQVRGEA 183
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 32/183 (17%)
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
T ++L+ T + H E LE LGDS L Y + L+ + EG +S + +
Sbjct: 16 TFTHPELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ L ++ + L +R P + K SG +
Sbjct: 76 VRGNTLAEMAREFDLGECLRLGPGELK--------SGGFR-------------------- 107
Query: 551 KSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYERQF--QVQAERLVNV 607
+ +AD VEALIG FL + +NV + LD +++ ++ P ++Q + + + +
Sbjct: 108 RESILADTVEALIGGIFLDSNIQNVEKLILDWYQTRLEQIS-PGDKQKDPKTRLQEFLQG 166
Query: 608 RHL 610
RHL
Sbjct: 167 RHL 169
>gi|393758412|ref|ZP_10347233.1| ribonuclease III [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393164831|gb|EJC64883.1| ribonuclease III [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 252
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 30/184 (16%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ + YSF+D LL +ALTH S+ R +RLEFLGD+VL++ + L+ ++ +
Sbjct: 7 LEAAIGYSFKDIGLLEQALTHRSHS----ARHNERLEFLGDSVLNFTVAALLFERFQRID 62
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + GL ++ EL F R
Sbjct: 63 EGDLSRLRANLVKQAALAEIATRLGLSDYLRLGEGELKS------GGFRR---------- 106
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM---ITPETMRLQPARELN 786
P L D +E++ GA+F+D+G + I L EPM + P+T+ P L
Sbjct: 107 -----PSILADALEAIFGAVFLDAGFTQAQTV--ITQLYEPMLVDVDPKTLGKDPKTLLQ 159
Query: 787 EYCQ 790
E Q
Sbjct: 160 ELLQ 163
Score = 42.7 bits (99), Expect = 0.79, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + H E LE LGDS L + + LF+ +Q EG LS + ++ AAL
Sbjct: 20 LLEQALTHRSHSARHNERLEFLGDSVLNFTVAALLFERFQRIDEGDLSRLRANLVKQAAL 79
Query: 497 CKLGCDHKLPGFIR 510
++ L ++R
Sbjct: 80 AEIATRLGLSDYLR 93
>gi|304398620|ref|ZP_07380492.1| ribonuclease III [Pantoea sp. aB]
gi|440757289|ref|ZP_20936477.1| Ribonuclease III [Pantoea agglomerans 299R]
gi|304353831|gb|EFM18206.1| ribonuclease III [Pantoea sp. aB]
gi|436428848|gb|ELP26497.1| Ribonuclease III [Pantoea agglomerans 299R]
Length = 226
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y+F LL +ALTH S + +RLEFLGD++L Y+I LY+++P
Sbjct: 6 INKLQRKLGYTFTHSELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G IF+DSG + +++ + + L+ I+P + P
Sbjct: 112 -----------LADTVEALIGGIFLDSGIERVEQLILDWYQSRLDE-ISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q H + + ++ G+A
Sbjct: 160 LQEYLQGRHLPLPSYLVVQVRGEA 183
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 30/167 (17%)
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
T S++L+ T + H E LE LGDS L Y + L+ + EG +S + +
Sbjct: 16 TFTHSELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ L ++ + L +R P + K SG +
Sbjct: 76 VRGNTLAEMAREFDLGECLRLGPGELK--------SGGFR-------------------- 107
Query: 551 KSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 596
+ +AD VEALIG FL +G E V + LD ++D ++ P ++Q
Sbjct: 108 RESILADTVEALIGGIFLDSGIERVEQLILDWYQSRLDEIS-PGDKQ 153
>gi|149194957|ref|ZP_01872050.1| ribonuclease III [Caminibacter mediatlanticus TB-2]
gi|149134878|gb|EDM23361.1| ribonuclease III [Caminibacter mediatlanticus TB-2]
Length = 227
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L+ L Y F+D L+ EALTH SY E +RLE+LGDAVLD ++ YLYN +P
Sbjct: 6 LQKSLGYQFKDEKLITEALTHRSYS-KEFNN--ERLEYLGDAVLDLIVGEYLYNLFPKAE 62
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G L+ +R+A VN + + + + L K++ + E E+ G E
Sbjct: 63 EGILSKLRAALVNEESFDKLAKRLNLGKYLFLSPAE-----------------ENNKGRE 105
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L E+L GA+++++G + KE+ + ++ P ITPE + L E
Sbjct: 106 K----PSILSSAFEALIGALYLEAGFDKAKEIALKLLKEEY-PKITPEELLKDYKTTLQE 160
Query: 788 YCQKH 792
Q H
Sbjct: 161 ITQAH 165
>gi|293604014|ref|ZP_06686427.1| ribonuclease III [Achromobacter piechaudii ATCC 43553]
gi|292817618|gb|EFF76686.1| ribonuclease III [Achromobacter piechaudii ATCC 43553]
Length = 253
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 28/189 (14%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L++ F DP+LL +ALTH S+ R +RLEFLGD+VL++++ L+ +Y +
Sbjct: 6 LENRLDHHFGDPALLEQALTHRSHG----ARHNERLEFLGDSVLNFVVAAMLFERYSKID 61
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + L +++ EL F R
Sbjct: 62 EGDLSRLRANLVKQASLADIAQRLELSQYLRLGEGELKS------GGFRR---------- 105
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E+L GA+F+D+G + + V+ +P+L + P+T+ L E
Sbjct: 106 -----PSILADTVEALFGAVFLDAGFDAARRVIVRQYQPVLAS-VDPKTLGKDAKTLLQE 159
Query: 788 YCQKHHFSM 796
+ Q ++
Sbjct: 160 FLQGRKLAL 168
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 29/135 (21%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + H E LE LGDS L + + LF+ Y EG LS + ++ A+L
Sbjct: 19 LLEQALTHRSHGARHNERLEFLGDSVLNFVVAAMLFERYSKIDEGDLSRLRANLVKQASL 78
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ +L ++R + K SG + + +A
Sbjct: 79 ADIAQRLELSQYLRLGEGELK--------SGGFR--------------------RPSILA 110
Query: 557 DVVEALIGA-FLSTG 570
D VEAL GA FL G
Sbjct: 111 DTVEALFGAVFLDAG 125
>gi|336437038|ref|ZP_08616747.1| ribonuclease III [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006172|gb|EGN36208.1| ribonuclease III [Lachnospiraceae bacterium 1_4_56FAA]
Length = 236
Score = 77.4 bits (189), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 31/181 (17%)
Query: 595 RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM----LPEIPRCYQRLEFLGD 650
R+ + ERL + LE+ + Y FRD SLL AL H S+ +P+ C +RLEFLGD
Sbjct: 3 RKERSMRERL---KELEARIGYEFRDVSLLERALRHSSFTNEKRMPK-QECNERLEFLGD 58
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVL+ + + +L+ +YP +S G+LT R++ V A + L K++L E
Sbjct: 59 AVLELVSSEFLFKEYPKVSEGELTKTRASMVCEPSLAFCARDIDLGKYLLLGKGE----- 113
Query: 711 NITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLL 768
E+T G + ++ D +E+L GAI++DSG KE + + I L
Sbjct: 114 ------------EATGGRQRDS----VTSDAMEALIGAIYLDSGFTNAKEFIHKFILSDL 157
Query: 769 E 769
E
Sbjct: 158 E 158
>gi|392545908|ref|ZP_10293045.1| RNase III, ds RNA [Pseudoalteromonas rubra ATCC 29570]
Length = 225
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + Y F D SLL +A+TH S+ + +RLEFLGD++L ++I LY ++
Sbjct: 4 NVTELYKKIGYEFTDQSLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYKQF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A V+ GL ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGVEFGLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA+F+DS K +V + L I+P + P
Sbjct: 103 GGYRREST----LADAVEAIIGAVFLDSDIETCKTLVLKWYDSRL-AAISPGHNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + G+A TVE G + + + A++ A+++
Sbjct: 158 LLQEYLQARKLPLPGYTVIDTKGQAHNQTFTVECIVEG-MESIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKILK 222
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 28/129 (21%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L+K + EG LS + ++ L
Sbjct: 21 LLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYKQFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG Y + T+A
Sbjct: 81 AEFGVEFGLGDYLRLGPGELK--------SGGYR--------------------RESTLA 112
Query: 557 DVVEALIGA 565
D VEA+IGA
Sbjct: 113 DAVEAIIGA 121
>gi|116873240|ref|YP_850021.1| ribonuclease III [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123466444|sp|A0AJR0.1|RNC_LISW6 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|116742118|emb|CAK21242.1| ribonuclease III [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 229
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ + + F+D LL +A TH SY+ E + +RLEFLGDAVL+ ++ YL+NKYP
Sbjct: 7 LQESVGFDFQDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSNYLFNKYP 66
Query: 667 TLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
++ G +T MR+A V C +L +H K+I + E
Sbjct: 67 DMAEGHMTKMRAAIV---CEPSLVEFAEAIH---------FSKYIRLG-------KGEEK 107
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G + P L D+ ES GA+++D+G +K V F LE +I P+
Sbjct: 108 AGGRTR---PALLADVFESFIGALYLDNGIDKVVTF------LERVIFPK 148
>gi|381209990|ref|ZP_09917061.1| ribonuclease III [Lentibacillus sp. Grbi]
Length = 227
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 35/242 (14%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYL 661
+N+ HLE L+ +F D SLL +A TH SY+ + + +RLEFLGDAVL+ ++ YL
Sbjct: 1 MNLSHLEQQLDITFNDQSLLKQAFTHSSYVNEHRDKNFSDNERLEFLGDAVLELGVSQYL 60
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
Y + L+ GDLT +R++ V C ++ S+EL + + E
Sbjct: 61 YKQKERLAEGDLTKLRASIV---C----------EPSLVEFSRELDFGDYLFLGKGE--- 104
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR--L 779
E + G E P L D+ E+ GA+++D G + VV + ++ + P IT +
Sbjct: 105 -EQSGGRER----PAILADVFEAFLGALYLDQGYD--VVIQFLKQHVYPKITTGAFSHAM 157
Query: 780 QPARELNEYCQK-HHFSMKKTVA----PRINGK--AAVTVEVHANGTLFKHTHADADKET 832
+L E Q+ + S+ +A P + + A V + H +G HT +A++
Sbjct: 158 DYKSKLQEQVQQTRNHSIDYVIADEKGPSHDKEFIAQVIINNHVSGEGAGHTKKEAEQRA 217
Query: 833 AK 834
AK
Sbjct: 218 AK 219
>gi|46908036|ref|YP_014425.1| ribonuclease III [Listeria monocytogenes serotype 4b str. F2365]
gi|47093844|ref|ZP_00231588.1| ribonuclease III [Listeria monocytogenes str. 4b H7858]
gi|226224408|ref|YP_002758515.1| ribonuclease III [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254826153|ref|ZP_05231154.1| ribonuclease III [Listeria monocytogenes FSL J1-194]
gi|254852713|ref|ZP_05242061.1| ribonuclease III [Listeria monocytogenes FSL R2-503]
gi|254933277|ref|ZP_05266636.1| ribonuclease III [Listeria monocytogenes HPB2262]
gi|300763882|ref|ZP_07073879.1| ribonuclease III [Listeria monocytogenes FSL N1-017]
gi|386732545|ref|YP_006206041.1| ribonuclease III [Listeria monocytogenes 07PF0776]
gi|404281417|ref|YP_006682315.1| ribonuclease III [Listeria monocytogenes SLCC2755]
gi|404287234|ref|YP_006693820.1| ribonuclease III [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|405750156|ref|YP_006673622.1| ribonuclease III [Listeria monocytogenes ATCC 19117]
gi|405753031|ref|YP_006676496.1| ribonuclease III [Listeria monocytogenes SLCC2378]
gi|405755965|ref|YP_006679429.1| ribonuclease III [Listeria monocytogenes SLCC2540]
gi|406704588|ref|YP_006754942.1| ribonuclease III [Listeria monocytogenes L312]
gi|417317908|ref|ZP_12104509.1| ribonuclease III [Listeria monocytogenes J1-220]
gi|424714681|ref|YP_007015396.1| Ribonuclease 3 [Listeria monocytogenes serotype 4b str. LL195]
gi|424823566|ref|ZP_18248579.1| Ribonuclease 3 [Listeria monocytogenes str. Scott A]
gi|73917580|sp|Q71YL2.1|RNC_LISMF RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|259491903|sp|C1KWA4.1|RNC_LISMC RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|46881306|gb|AAT04602.1| ribonuclease III [Listeria monocytogenes serotype 4b str. F2365]
gi|47017785|gb|EAL08574.1| ribonuclease III [Listeria monocytogenes str. 4b H7858]
gi|225876870|emb|CAS05579.1| Putative ribonuclease III [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606034|gb|EEW18642.1| ribonuclease III [Listeria monocytogenes FSL R2-503]
gi|293584837|gb|EFF96869.1| ribonuclease III [Listeria monocytogenes HPB2262]
gi|293595393|gb|EFG03154.1| ribonuclease III [Listeria monocytogenes FSL J1-194]
gi|300515618|gb|EFK42668.1| ribonuclease III [Listeria monocytogenes FSL N1-017]
gi|328473534|gb|EGF44371.1| ribonuclease III [Listeria monocytogenes J1-220]
gi|332312246|gb|EGJ25341.1| Ribonuclease 3 [Listeria monocytogenes str. Scott A]
gi|384391303|gb|AFH80373.1| ribonuclease III [Listeria monocytogenes 07PF0776]
gi|404219356|emb|CBY70720.1| ribonuclease III [Listeria monocytogenes ATCC 19117]
gi|404222231|emb|CBY73594.1| ribonuclease III [Listeria monocytogenes SLCC2378]
gi|404225165|emb|CBY76527.1| ribonuclease III [Listeria monocytogenes SLCC2540]
gi|404228052|emb|CBY49457.1| ribonuclease III [Listeria monocytogenes SLCC2755]
gi|404246163|emb|CBY04388.1| ribonuclease III [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406361618|emb|CBY67891.1| ribonuclease III [Listeria monocytogenes L312]
gi|424013865|emb|CCO64405.1| Ribonuclease 3 [Listeria monocytogenes serotype 4b str. LL195]
Length = 229
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ + + F+D LL +A TH SY+ E + +RLEFLGDAVL+ ++ YL+NKYP
Sbjct: 7 LQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSNYLFNKYP 66
Query: 667 TLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
++ G +T MR+A V C +L +H K++ + E
Sbjct: 67 DMAEGHMTKMRAAIV---CEPSLVEFAEAVH---------FSKYVRLG-------KGEEK 107
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G + P L D+ ES GA+++D+G +K V F LE +I P+
Sbjct: 108 AGGRTR---PALLADVFESFIGALYLDNGIDKVVTF------LERVIFPK 148
>gi|442609958|ref|ZP_21024686.1| Ribonuclease III [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441748550|emb|CCQ10748.1| Ribonuclease III [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 225
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V+ L + + Y+F P LL +A+TH S+ + +RLEFLGD++L ++I L++K+
Sbjct: 4 DVKELYNKIGYTFTSPELLEQAMTHRSFK----GQHNERLEFLGDSILSFVIANALFHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A V+ L ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGVEFNLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA+F+DS + E+V L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAVFLDSDIDTCAELVLAWYESRLDE-ISPGHNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + G+A TVE G + + ++ +K A K
Sbjct: 158 LLQEYLQARKLPLPGYTVVDTKGQAHNQTFTVECIVEGMESIISKGSSRRKAEQKAAEK- 216
Query: 841 VLKSLK 846
LK LK
Sbjct: 217 ALKKLK 222
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 28/135 (20%)
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
T + ++LE T + +G H E LE LGDS L + + LF + EG LS + +
Sbjct: 15 TFTSPELLEQAMTHRSFKGQHNERLEFLGDSILSFVIANALFHKFPKAREGDLSRMRSTL 74
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ L + G + L ++R P + K SG +
Sbjct: 75 VRGQTLAEFGVEFNLGDYLRLGPGELK--------SGGFR-------------------- 106
Query: 551 KSKTVADVVEALIGA 565
+ T+AD VEA+IGA
Sbjct: 107 RESTLADAVEAIIGA 121
>gi|419589670|ref|ZP_14125455.1| ribonuclease III [Campylobacter coli 317/04]
gi|380566873|gb|EIA89433.1| ribonuclease III [Campylobacter coli 317/04]
Length = 224
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 24/149 (16%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ LE L Y F+D LL+ ALTH S+ + P +RLEFLGDAVLD ++ YL++K+
Sbjct: 3 NIELLEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ GDL+ +R+A VN +A + L I ++ E E+
Sbjct: 60 AKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
G E P L D +E++ GAI +++G
Sbjct: 103 GGKEK----PSILSDALEAIMGAIHLEAG 127
>gi|253827732|ref|ZP_04870617.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
gi|313141944|ref|ZP_07804137.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
gi|253511138|gb|EES89797.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
gi|313130975|gb|EFR48592.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
Length = 224
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
++++ + L Y F + +LL EALTH S + +RLEFLGDAVLD +I +LY K
Sbjct: 1 MDLKDFQQYLGYHFSNQNLLQEALTHKS---AKKSTHNERLEFLGDAVLDLIIGEFLYKK 57
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P G+L+ MR++ VN +A ++ +++NI + S E
Sbjct: 58 FPHSPEGELSKMRASMVNEKAFA-----------------KIARYLNIGEYLYISHSEEQ 100
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQPAR 783
G E ++ L + E++ GAI+++SG K + + I +L P I E +
Sbjct: 101 NNGREKDS----ILSNAFEAIVGAIYLESGLEKVQTIVLKILDILYPKIDLENLFYDYKT 156
Query: 784 ELNEYCQ 790
L E Q
Sbjct: 157 SLQELTQ 163
>gi|359453126|ref|ZP_09242450.1| ribonuclease III [Pseudoalteromonas sp. BSi20495]
gi|414071304|ref|ZP_11407275.1| ribonuclease III [Pseudoalteromonas sp. Bsw20308]
gi|358049757|dbj|GAA78699.1| ribonuclease III [Pseudoalteromonas sp. BSi20495]
gi|410806268|gb|EKS12263.1| ribonuclease III [Pseudoalteromonas sp. Bsw20308]
Length = 225
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L + Y F D LL +A+TH S+ + +RLEFLGD++L ++I LY K+
Sbjct: 4 NVTELYDKIGYVFTDQGLLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYAKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A ++ GL ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA F+DSG ++ E++ L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAAFLDSGIDRCGELILAWYESRLDA-ISPGLNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L E+ Q + G+A TVE +G + + + A++ A+++
Sbjct: 158 LLQEHLQGRKLPLPGYTVVDTKGQAHNQTFTVECIVDG-MDSIISVGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK +K
Sbjct: 217 ALKIIK 222
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L+ + EG LS + ++ L
Sbjct: 21 LLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG + + T+A
Sbjct: 81 AEFGLEFGLGDYLRLGPGELK--------SGGFR--------------------RESTLA 112
Query: 557 DVVEALIG-AFLSTGGENVGLIFL 579
D VEA+IG AFL +G + G + L
Sbjct: 113 DAVEAIIGAAFLDSGIDRCGELIL 136
>gi|222824476|ref|YP_002576050.1| ribonuclease III [Campylobacter lari RM2100]
gi|222539697|gb|ACM64798.1| ribonuclease III [Campylobacter lari RM2100]
Length = 222
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 24/151 (15%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
++ L+ LNY F++ LL+EALTH SY + P +RLEFLGDAV+D ++ +L+ K+
Sbjct: 2 LKKLQERLNYHFKNEQLLIEALTHKSY---KKPYNNERLEFLGDAVMDLVVGEFLFFKFQ 58
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
S G+L+ +R+A VN +A + K L + I F ++ E+
Sbjct: 59 KESEGNLSKLRAALVNEKSFANLAQKLDLGECI-----------------FMSIAEENND 101
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNK 757
G P L D E+L GA++++ G K
Sbjct: 102 GRNK----PSILSDAFEALMGAMYLEIGFEK 128
>gi|419585204|ref|ZP_14121265.1| ribonuclease III [Campylobacter coli 202/04]
gi|380562621|gb|EIA85477.1| ribonuclease III [Campylobacter coli 202/04]
Length = 224
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 24/149 (16%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ LE L Y F+D LL+ ALTH S+ + P +RLEFLGDAVLD ++ YL++K+
Sbjct: 3 NIELLEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ GDL+ +R+A VN +A + L I ++ E E+
Sbjct: 60 AKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
G E P L D +E++ GAI +++G
Sbjct: 103 GGKEK----PSILSDALEAIMGAIHLEAG 127
>gi|305432452|ref|ZP_07401614.1| ribonuclease III [Campylobacter coli JV20]
gi|304444491|gb|EFM37142.1| ribonuclease III [Campylobacter coli JV20]
Length = 225
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 24/149 (16%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ LE L Y F+D LL+ ALTH S+ + P +RLEFLGDAVLD ++ YL++K+
Sbjct: 4 NIELLEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKF 60
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ GDL+ +R+A VN +A + L I ++ E E+
Sbjct: 61 AKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAE-----------------ENN 103
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
G E P L D +E++ GAI +++G
Sbjct: 104 GGKEK----PSILSDALEAIMGAIHLEAG 128
>gi|91205996|ref|YP_538351.1| ribonuclease III [Rickettsia bellii RML369-C]
gi|157826640|ref|YP_001495704.1| ribonuclease III [Rickettsia bellii OSU 85-389]
gi|122425284|sp|Q1RHA2.1|RNC_RICBR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|189043340|sp|A8GYE2.1|RNC_RICB8 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|91069540|gb|ABE05262.1| Ribonuclease III [Rickettsia bellii RML369-C]
gi|157801944|gb|ABV78667.1| ribonuclease III [Rickettsia bellii OSU 85-389]
Length = 227
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 610 LESLLNYSFRDPSLLVEALTHGS---YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
LE LL+YSF++ +LL EAL+H S + + + Y+RLEFLGDAVL+ +IT L+N +
Sbjct: 7 LEKLLDYSFKNKALLTEALSHPSLRQHHEYKANKDYERLEFLGDAVLNLIITEILFNNFK 66
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ G+L +RS V + + K GL +I+ E E
Sbjct: 67 EYNEGNLAKIRSYLVCKETICVVGAKLGLKNYIIMTHGE-----------------EIAG 109
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR-LQPAREL 785
G ++ P + ++ E+L AI++DS + I L I + + P L
Sbjct: 110 GRDN----PNNIENVTEALIAAIYLDSDIT--TIHNIIGKLWAEFIKVKDLTDYDPKTAL 163
Query: 786 NEYCQK--HHFSMKKTVAPR-INGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
E+ Q HH + + + + + TV V NG ++ T + A+K A++E+L
Sbjct: 164 QEWAQSKDHHIPIYRLIKREGVAHLSTFTVSVKING--YEQTGKGHSIKEAEKNAARELL 221
Query: 843 KSLK 846
LK
Sbjct: 222 HKLK 225
>gi|419550405|ref|ZP_14088911.1| ribonuclease III [Campylobacter coli 2688]
gi|419553745|ref|ZP_14091902.1| ribonuclease III [Campylobacter coli 2698]
gi|380530677|gb|EIA55739.1| ribonuclease III [Campylobacter coli 2688]
gi|380533733|gb|EIA58640.1| ribonuclease III [Campylobacter coli 2698]
Length = 224
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 24/149 (16%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ LE L Y F+D LL+ ALTH S+ + P +RLEFLGDAVLD ++ YL++K+
Sbjct: 3 NIELLEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ GDL+ +R+A VN +A + L I ++ E E+
Sbjct: 60 AKDAEGDLSKLRAALVNEKSFAKIANSVNLGDFIFMSAAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
G E P L D +E++ GAI +++G
Sbjct: 103 GGKEK----PSILSDALEAIMGAIHLEAG 127
>gi|328766179|gb|EGF76236.1| hypothetical protein BATDEDRAFT_28693 [Batrachochytrium
dendrobatidis JAM81]
Length = 334
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
+QRLEFLGDAVL YL+ +LY P L+PG L+ +R+ V N A S++ GL K+I H
Sbjct: 15 FQRLEFLGDAVLSYLVMQHLYKITPPLNPGGLSKLRAELVCNQFLACVSIQIGLVKYIRH 74
Query: 702 -------ASQELYKWINITVDSFERLSL----------ESTFGWESETSFPKALGDIIES 744
A W+ + S SL + W + PK GD+ ES
Sbjct: 75 TDMTMEAAIGRFAAWVQGYLASESSTSLPISTSATQIASARLFWNKGNTAPKTAGDVYES 134
Query: 745 LSGAIFVDS 753
+ GA+FVDS
Sbjct: 135 MLGAVFVDS 143
>gi|452124161|ref|ZP_21936745.1| ribonuclease III [Bordetella holmesii F627]
gi|452127550|ref|ZP_21940131.1| ribonuclease III [Bordetella holmesii H558]
gi|451923391|gb|EMD73532.1| ribonuclease III [Bordetella holmesii F627]
gi|451926830|gb|EMD76960.1| ribonuclease III [Bordetella holmesii H558]
Length = 251
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE+ L + F D +LL +ALTH S+ R +RLEFLGD+VL++++ L+ +Y L
Sbjct: 6 LETRLGHHFGDQALLEQALTHRSHG----ARHNERLEFLGDSVLNFVVAAMLFERYAKLD 61
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDL+ +R+ V A + + L ++ EL F R
Sbjct: 62 EGDLSRVRANLVKQASLADIAQRLDLSLYLRLGEGELKS------GGFRR---------- 105
Query: 730 SETSFPKALGDIIESLSGAIFVDSG--CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E+L GA+F+D+G + V+ P+L + P+T+ L E
Sbjct: 106 -----PSILADTVEALFGAVFLDAGFAAARTVIERQYDPVLAS-VDPQTLGKDAKTLLQE 159
Query: 788 YCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
+ Q ++ +G A VE K T A + A++ A+K L++
Sbjct: 160 FLQGRKMALPIYTVVATHGAAHSQQFEVECAIPALEIKVTAGGASRRAAEQSAAKLALEA 219
Query: 845 LKASFP 850
+A P
Sbjct: 220 AQAVSP 225
>gi|397691446|ref|YP_006528700.1| ribonuclease III [Melioribacter roseus P3M]
gi|395812938|gb|AFN75687.1| ribonuclease III [Melioribacter roseus P3M]
Length = 254
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 23/154 (14%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYL 661
L ++ LES+L + ++ ++ALTH SY+ PE+ + +RLEFLGDAVL+ ++ YL
Sbjct: 22 LFDIELLESILGFKVKNAEYYIKALTHRSYLELFPELEKSNERLEFLGDAVLNMVVAEYL 81
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ Y T G LT +RS VN + G+ + +L+ K+I+ T + + +
Sbjct: 82 FRTYSTQEEGFLTKVRSTIVNRANLFACAEYLGIVRLLLYNQ----KYIDQTAEGMKTI- 136
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGC 755
L D IE+L GAI++D G
Sbjct: 137 ----------------LSDAIEALIGAIYLDRGL 154
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 54/240 (22%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
E LE LGD+ L ++ LF+TY EG L+ + I++ A L C L G +R
Sbjct: 63 ERLEFLGDAVLNMVVAEYLFRTYSTQEEGFLTKVRSTIVNRANL--FACAEYL-GIVRL- 118
Query: 513 PFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
L+N++ Y+ + ++D +EALIGA
Sbjct: 119 ----------------------LLYNQK--YIDQTAEGMKTILSDAIEALIGA------- 147
Query: 573 NVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS 632
I+LDR G+K Y +QF ++A L + H L + +++ L LTH
Sbjct: 148 ----IYLDR-GLK-------YAKQFILRAVILPSKEHGNILKDQNYKGQLL---ELTHSK 192
Query: 633 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVK 692
+ PR E ++++ V++ N+ L G + ++A N ALS +K
Sbjct: 193 KISS--PRYVVVSETGPQHDKEFVVDVFVNNE--KLGSGKGKNKKTAEQNAAKDALSKIK 248
>gi|315282805|ref|ZP_07871128.1| ribonuclease III [Listeria marthii FSL S4-120]
gi|313613534|gb|EFR87355.1| ribonuclease III [Listeria marthii FSL S4-120]
Length = 229
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ + + F+D LL +A TH SY+ E + +RLEFLGDAVL+ ++ YL+NKYP
Sbjct: 7 LQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDYLFNKYP 66
Query: 667 TLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
++ G +T MR+A V C +L +H K++ + E
Sbjct: 67 EMAEGHMTKMRAAIV---CEPSLVEFAEAVH---------FSKYVRLG-------KGEEK 107
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G + P L D+ ES GA+++D+G +K V F LE +I P+
Sbjct: 108 AGGRTR---PALLADVFESFIGALYLDNGIDKVVTF------LERVIFPK 148
>gi|392309582|ref|ZP_10272116.1| RNase III, ds RNA [Pseudoalteromonas citrea NCIMB 1889]
Length = 225
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
NV L S + Y F D +LL +A+TH S+ + +RLEFLGD++L ++I LY ++
Sbjct: 4 NVAELYSKIGYQFTDEALLEQAMTHRSHK----GQHNERLEFLGDSILSFVIANALYEQF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P GDL+ MRS V A V+ L ++ EL +
Sbjct: 60 PKAREGDLSRMRSTLVRGQTLAEFGVEFNLGDYLRLGPGEL-----------------KS 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPAR 783
G+ E++ L D +E++ GA+F+DS N+ +++ + L+ I+P + P
Sbjct: 103 GGFRREST----LADAVEAIIGAVFLDSDINECSDLILRWYQSRLDA-ISPGHNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + G+A TVE G + + + A++ A+++
Sbjct: 158 LLQEYLQARKLPLPGYTVIDTKGQAHNQTFTVECIVEG-MDSIISIGSSRRKAEQKAAEK 216
Query: 841 VLKSLK 846
LK +K
Sbjct: 217 ALKIIK 222
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 29/134 (21%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+LE T + +G H E LE LGDS L + + L++ + EG LS + ++ L
Sbjct: 21 LLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYEQFPKAREGDLSRMRSTLVRGQTL 80
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
+ G + L ++R P + K SG + + T+A
Sbjct: 81 AEFGVEFNLGDYLRLGPGELK--------SGGFR--------------------RESTLA 112
Query: 557 DVVEALIGA-FLST 569
D VEA+IGA FL +
Sbjct: 113 DAVEAIIGAVFLDS 126
>gi|57168805|ref|ZP_00367936.1| ribonuclease III Cj1635c [Campylobacter coli RM2228]
gi|419537870|ref|ZP_14077235.1| ribonuclease III [Campylobacter coli 90-3]
gi|419540283|ref|ZP_14079521.1| ribonuclease III [Campylobacter coli Z163]
gi|419544520|ref|ZP_14083476.1| ribonuclease III [Campylobacter coli 2553]
gi|419546878|ref|ZP_14085623.1| ribonuclease III [Campylobacter coli 2680]
gi|419549476|ref|ZP_14088066.1| ribonuclease III [Campylobacter coli 2685]
gi|419553184|ref|ZP_14091447.1| ribonuclease III [Campylobacter coli 2692]
gi|419555536|ref|ZP_14093549.1| ribonuclease III [Campylobacter coli 84-2]
gi|419557967|ref|ZP_14095857.1| ribonuclease III [Campylobacter coli 80352]
gi|419560500|ref|ZP_14098141.1| ribonuclease III [Campylobacter coli 86119]
gi|419562240|ref|ZP_14099759.1| ribonuclease III [Campylobacter coli 1091]
gi|419565239|ref|ZP_14102588.1| ribonuclease III [Campylobacter coli 1098]
gi|419566594|ref|ZP_14103848.1| ribonuclease III [Campylobacter coli 1148]
gi|419569978|ref|ZP_14107033.1| ribonuclease III [Campylobacter coli 7--1]
gi|419571931|ref|ZP_14108869.1| ribonuclease III [Campylobacter coli 132-6]
gi|419574263|ref|ZP_14111024.1| ribonuclease III [Campylobacter coli 1891]
gi|419575098|ref|ZP_14111795.1| ribonuclease III [Campylobacter coli 1909]
gi|419577226|ref|ZP_14113783.1| ribonuclease III [Campylobacter coli 59-2]
gi|419579706|ref|ZP_14116108.1| ribonuclease III [Campylobacter coli 1948]
gi|419581745|ref|ZP_14118035.1| ribonuclease III [Campylobacter coli 1957]
gi|419591030|ref|ZP_14126389.1| ribonuclease III [Campylobacter coli 37/05]
gi|419592712|ref|ZP_14127956.1| ribonuclease III [Campylobacter coli LMG 9854]
gi|419595070|ref|ZP_14130184.1| ribonuclease III [Campylobacter coli LMG 23336]
gi|419596512|ref|ZP_14131515.1| ribonuclease III [Campylobacter coli LMG 23341]
gi|419599217|ref|ZP_14134083.1| ribonuclease III [Campylobacter coli LMG 23342]
gi|419600989|ref|ZP_14135725.1| ribonuclease III [Campylobacter coli LMG 23344]
gi|419602764|ref|ZP_14137338.1| ribonuclease III [Campylobacter coli 151-9]
gi|419604007|ref|ZP_14138482.1| ribonuclease III [Campylobacter coli LMG 9853]
gi|419606995|ref|ZP_14141345.1| ribonuclease III [Campylobacter coli LMG 9860]
gi|419608702|ref|ZP_14142887.1| ribonuclease III [Campylobacter coli H6]
gi|419611039|ref|ZP_14145088.1| ribonuclease III [Campylobacter coli H8]
gi|419612541|ref|ZP_14146417.1| ribonuclease III [Campylobacter coli H9]
gi|419614811|ref|ZP_14148580.1| ribonuclease III [Campylobacter coli H56]
gi|419617063|ref|ZP_14150694.1| ribonuclease III [Campylobacter coli Z156]
gi|57019852|gb|EAL56535.1| ribonuclease III Cj1635c [Campylobacter coli RM2228]
gi|380517237|gb|EIA43356.1| ribonuclease III [Campylobacter coli Z163]
gi|380519417|gb|EIA45495.1| ribonuclease III [Campylobacter coli 90-3]
gi|380521629|gb|EIA47349.1| ribonuclease III [Campylobacter coli 2680]
gi|380525099|gb|EIA50654.1| ribonuclease III [Campylobacter coli 2553]
gi|380525687|gb|EIA51192.1| ribonuclease III [Campylobacter coli 2685]
gi|380529448|gb|EIA54604.1| ribonuclease III [Campylobacter coli 2692]
gi|380535994|gb|EIA60660.1| ribonuclease III [Campylobacter coli 84-2]
gi|380536990|gb|EIA61575.1| ribonuclease III [Campylobacter coli 86119]
gi|380540084|gb|EIA64409.1| ribonuclease III [Campylobacter coli 1098]
gi|380540610|gb|EIA64910.1| ribonuclease III [Campylobacter coli 80352]
gi|380541447|gb|EIA65709.1| ribonuclease III [Campylobacter coli 1091]
gi|380545945|gb|EIA69908.1| ribonuclease III [Campylobacter coli 1148]
gi|380548527|gb|EIA72429.1| ribonuclease III [Campylobacter coli 7--1]
gi|380549901|gb|EIA73629.1| ribonuclease III [Campylobacter coli 1891]
gi|380552684|gb|EIA76239.1| ribonuclease III [Campylobacter coli 132-6]
gi|380554296|gb|EIA77773.1| ribonuclease III [Campylobacter coli 1909]
gi|380556681|gb|EIA79925.1| ribonuclease III [Campylobacter coli 1948]
gi|380557699|gb|EIA80902.1| ribonuclease III [Campylobacter coli 59-2]
gi|380558478|gb|EIA81656.1| ribonuclease III [Campylobacter coli 1957]
gi|380569220|gb|EIA91667.1| ribonuclease III [Campylobacter coli 37/05]
gi|380571779|gb|EIA94137.1| ribonuclease III [Campylobacter coli LMG 9854]
gi|380574438|gb|EIA96541.1| ribonuclease III [Campylobacter coli LMG 23336]
gi|380575832|gb|EIA97900.1| ribonuclease III [Campylobacter coli LMG 23342]
gi|380575953|gb|EIA98015.1| ribonuclease III [Campylobacter coli LMG 23341]
gi|380580494|gb|EIB02242.1| ribonuclease III [Campylobacter coli 151-9]
gi|380580987|gb|EIB02719.1| ribonuclease III [Campylobacter coli LMG 9853]
gi|380582338|gb|EIB04002.1| ribonuclease III [Campylobacter coli LMG 23344]
gi|380585061|gb|EIB06434.1| ribonuclease III [Campylobacter coli H6]
gi|380586154|gb|EIB07466.1| ribonuclease III [Campylobacter coli LMG 9860]
gi|380588981|gb|EIB10066.1| ribonuclease III [Campylobacter coli H8]
gi|380590213|gb|EIB11238.1| ribonuclease III [Campylobacter coli H9]
gi|380592232|gb|EIB13144.1| ribonuclease III [Campylobacter coli H56]
gi|380594164|gb|EIB14970.1| ribonuclease III [Campylobacter coli Z156]
Length = 224
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 24/149 (16%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ LE L Y F+D LL+ ALTH S+ + P +RLEFLGDAVLD ++ YL++K+
Sbjct: 3 NIELLEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ GDL+ +R+A VN +A + L I ++ E E+
Sbjct: 60 AKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
G E P L D +E++ GAI +++G
Sbjct: 103 GGKEK----PSILSDALEAIMGAIHLEAG 127
>gi|47097388|ref|ZP_00234939.1| ribonuclease III [Listeria monocytogenes str. 1/2a F6854]
gi|217964043|ref|YP_002349721.1| ribonuclease III [Listeria monocytogenes HCC23]
gi|254829200|ref|ZP_05233887.1| ribonuclease III [Listeria monocytogenes FSL N3-165]
gi|254912363|ref|ZP_05262375.1| ribonuclease III [Listeria monocytogenes J2818]
gi|254936690|ref|ZP_05268387.1| ribonuclease III [Listeria monocytogenes F6900]
gi|290893065|ref|ZP_06556054.1| ribonuclease III [Listeria monocytogenes FSL J2-071]
gi|386008577|ref|YP_005926855.1| ribonuclease III [Listeria monocytogenes L99]
gi|386027184|ref|YP_005947960.1| putative ribonuclease III [Listeria monocytogenes M7]
gi|386047457|ref|YP_005965789.1| ribonuclease III [Listeria monocytogenes J0161]
gi|404408249|ref|YP_006690964.1| ribonuclease III [Listeria monocytogenes SLCC2376]
gi|404413884|ref|YP_006699471.1| ribonuclease III [Listeria monocytogenes SLCC7179]
gi|422410046|ref|ZP_16487007.1| ribonuclease III [Listeria monocytogenes FSL F2-208]
gi|422809886|ref|ZP_16858297.1| Ribonuclease III [Listeria monocytogenes FSL J1-208]
gi|254807893|sp|B8DDU8.1|RNC_LISMH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|47014236|gb|EAL05218.1| ribonuclease III [Listeria monocytogenes str. 1/2a F6854]
gi|217333313|gb|ACK39107.1| ribonuclease III [Listeria monocytogenes HCC23]
gi|258601611|gb|EEW14936.1| ribonuclease III [Listeria monocytogenes FSL N3-165]
gi|258609286|gb|EEW21894.1| ribonuclease III [Listeria monocytogenes F6900]
gi|290557425|gb|EFD90950.1| ribonuclease III [Listeria monocytogenes FSL J2-071]
gi|293590344|gb|EFF98678.1| ribonuclease III [Listeria monocytogenes J2818]
gi|307571387|emb|CAR84566.1| ribonuclease III [Listeria monocytogenes L99]
gi|313608181|gb|EFR84216.1| ribonuclease III [Listeria monocytogenes FSL F2-208]
gi|336023765|gb|AEH92902.1| putative ribonuclease III [Listeria monocytogenes M7]
gi|345534448|gb|AEO03889.1| ribonuclease III [Listeria monocytogenes J0161]
gi|378751550|gb|EHY62138.1| Ribonuclease III [Listeria monocytogenes FSL J1-208]
gi|404239583|emb|CBY60984.1| ribonuclease III [Listeria monocytogenes SLCC7179]
gi|404242398|emb|CBY63798.1| ribonuclease III [Listeria monocytogenes SLCC2376]
Length = 229
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ + + F+D LL +A TH SY+ E + +RLEFLGDAVL+ ++ YL+NKYP
Sbjct: 7 LQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDYLFNKYP 66
Query: 667 TLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
++ G +T MR+A V C +L +H K++ + E
Sbjct: 67 DMAEGHMTKMRAAIV---CEPSLVEFAEAVH---------FSKYVRLG-------KGEEK 107
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G + P L D+ ES GA+++D+G +K V F LE +I P+
Sbjct: 108 AGGRTR---PALLADVFESFIGALYLDNGIDKVVTF------LERVIFPK 148
>gi|386828233|ref|ZP_10115340.1| ribonuclease III [Beggiatoa alba B18LD]
gi|386429117|gb|EIJ42945.1| ribonuclease III [Beggiatoa alba B18LD]
Length = 225
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 28/186 (15%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L +LNY FR S L ALTH S R +RLEFLGD++L+Y+ L+ ++PT S
Sbjct: 8 LYKVLNYLFRQESYLTMALTHRSAG----SRNNERLEFLGDSLLNYIAAEALFERFPTAS 63
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G+LT R+ V + A + + L ++ EL + GW
Sbjct: 64 EGELTRSRATLVREETLAEIAQQLNLGDYLQLGGGEL-----------------KSGGWR 106
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E++ GAI++DS K+V+ ++P L+ + +P + P L E
Sbjct: 107 R----PSILADALEAVFGAIYLDSDIQTCKQVILRLLKPRLDKL-SPHKITKDPKTCLQE 161
Query: 788 YCQKHH 793
Y Q
Sbjct: 162 YLQAQQ 167
>gi|419537205|ref|ZP_14076664.1| ribonuclease III [Campylobacter coli 111-3]
gi|419568861|ref|ZP_14105990.1| ribonuclease III [Campylobacter coli 1417]
gi|419583483|ref|ZP_14119664.1| ribonuclease III [Campylobacter coli 1961]
gi|419587626|ref|ZP_14123539.1| ribonuclease III [Campylobacter coli 67-8]
gi|380515558|gb|EIA41717.1| ribonuclease III [Campylobacter coli 111-3]
gi|380544843|gb|EIA68849.1| ribonuclease III [Campylobacter coli 1417]
gi|380563074|gb|EIA85920.1| ribonuclease III [Campylobacter coli 1961]
gi|380563757|gb|EIA86585.1| ribonuclease III [Campylobacter coli 67-8]
Length = 224
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 24/149 (16%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ LE L Y F+D LL+ ALTH S+ + P +RLEFLGDAVLD ++ YL++K+
Sbjct: 3 NIELLEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
+ GDL+ +R+A VN +A + L I ++ E E+
Sbjct: 60 AKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
G E P L D +E++ GAI +++G
Sbjct: 103 GGKEK----PSILSDALEAIMGAIHLEAG 127
>gi|62184964|ref|YP_219749.1| ribonuclease III [Chlamydophila abortus S26/3]
gi|424825015|ref|ZP_18250002.1| ribonuclease III [Chlamydophila abortus LLG]
gi|81312866|sp|Q5L6E3.1|RNC_CHLAB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|62148031|emb|CAH63783.1| ribonuclease III [Chlamydophila abortus S26/3]
gi|333410114|gb|EGK69101.1| ribonuclease III [Chlamydophila abortus LLG]
Length = 237
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 42/253 (16%)
Query: 604 LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYL 661
L+N++ +E+ LN++F P LLV ALTH SY I +RLEFLGDAVL ++T +L
Sbjct: 4 LINIKEVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHL 63
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
+ +P++ G L+ R+A +N + GL +++L + ER+
Sbjct: 64 FLLFPSMDEGTLSTARAALINAVSCCQYTDALGLGEYLL-------------IGKGERI- 109
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET----- 776
++E A ++ E++ GA+++D G R + P++ +
Sbjct: 110 -------QNERGKTSAYANLFEAILGAVYLDGG------LAPARQITVPLLPSKKDILPL 156
Query: 777 MRLQPARELNEYCQKHH-----FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKE 831
M P L + QKH + + +P+ G + + V N ++ A + KE
Sbjct: 157 MLGNPKNRLQQLTQKHLRTLPVYQYEPWTSPQ--GASGYHIRVLVNHEVWGEGFALSKKE 214
Query: 832 TAKKVASKEVLKS 844
A+K+A+++ L +
Sbjct: 215 -AEKLAAQQALDA 226
>gi|313683639|ref|YP_004061377.1| RNAase III [Sulfuricurvum kujiense DSM 16994]
gi|313156499|gb|ADR35177.1| RNAse III [Sulfuricurvum kujiense DSM 16994]
Length = 226
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 29/191 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N++ L+ L Y+F++ LL+EALTH SY + P +RLEFLGDAVLD ++ YLY K+
Sbjct: 3 NLQALQERLGYTFQNKELLIEALTHKSY---KQPYNNERLEFLGDAVLDLIVGEYLYKKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
G L+ MR++ VN + + L +HI ++ E E+
Sbjct: 60 RGYDEGKLSKMRASLVNEGGFTSLANHLNLGEHIFLSNAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE---PMITPETMRLQPA 782
G +++S L + E++ GA+++++G K V E LLE P I+ +++
Sbjct: 103 SG-RTKSSL---LSNAFEAVMGAMYLETGLGK--VQEITVSLLEHVHPDISLDSLFKDYK 156
Query: 783 RELNEYCQKHH 793
L E Q H+
Sbjct: 157 TSLQELTQAHY 167
>gi|89255958|ref|YP_513320.1| ribonuclease III [Francisella tularensis subsp. holarctica LVS]
gi|187931188|ref|YP_001891172.1| ribonuclease III [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254367315|ref|ZP_04983341.1| ribonuclease III [Francisella tularensis subsp. holarctica 257]
gi|254368791|ref|ZP_04984804.1| hypothetical protein FTAG_00596 [Francisella tularensis subsp.
holarctica FSC022]
gi|421751216|ref|ZP_16188270.1| ribonuclease III [Francisella tularensis subsp. tularensis AS_713]
gi|421753072|ref|ZP_16190076.1| ribonuclease III [Francisella tularensis subsp. tularensis 831]
gi|421756801|ref|ZP_16193697.1| ribonuclease III [Francisella tularensis subsp. tularensis
80700103]
gi|421758668|ref|ZP_16195511.1| ribonuclease III [Francisella tularensis subsp. tularensis
70102010]
gi|422938410|ref|YP_007011557.1| ribonuclease III [Francisella tularensis subsp. holarctica FSC200]
gi|424673937|ref|ZP_18110865.1| ribonuclease III [Francisella tularensis subsp. tularensis
70001275]
gi|122501056|sp|Q2A4N2.1|RNC_FRATH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|238691551|sp|B2SFY4.1|RNC_FRATM RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|89143789|emb|CAJ78994.1| Ribonuclease III [Francisella tularensis subsp. holarctica LVS]
gi|134253131|gb|EBA52225.1| ribonuclease III [Francisella tularensis subsp. holarctica 257]
gi|157121712|gb|EDO65882.1| hypothetical protein FTAG_00596 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712097|gb|ACD30394.1| ribonuclease III [Francisella tularensis subsp. mediasiatica
FSC147]
gi|407293561|gb|AFT92467.1| ribonuclease III [Francisella tularensis subsp. holarctica FSC200]
gi|409088288|gb|EKM88362.1| ribonuclease III [Francisella tularensis subsp. tularensis 831]
gi|409088525|gb|EKM88591.1| ribonuclease III [Francisella tularensis subsp. tularensis AS_713]
gi|409091947|gb|EKM91931.1| ribonuclease III [Francisella tularensis subsp. tularensis
70102010]
gi|409093236|gb|EKM93189.1| ribonuclease III [Francisella tularensis subsp. tularensis
80700103]
gi|417435480|gb|EKT90381.1| ribonuclease III [Francisella tularensis subsp. tularensis
70001275]
Length = 230
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 49/241 (20%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
++L Y+F+D +LL+ ALTH S + + Y+RLEFLGD+VL ++I LY ++ L+ G
Sbjct: 10 NILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYKQFTDLAEG 65
Query: 672 DLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWES 730
L+ +RS V A L+S ++ +D + L G +
Sbjct: 66 KLSQLRSKLVKGTTLAQLAS--------------------SLKMDEYIILGASEQGGHKR 105
Query: 731 ETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR-ELNE 787
E K L D+ E++ GAI++DS K+V+ + +P++ I +T++++ ++ +L E
Sbjct: 106 E----KILEDVFEAVIGAIYLDSDFATVKKVILKWYQPIISS-INLDTIKVKDSKSKLQE 160
Query: 788 YCQKHHFSMKKTVAPRINGK--------AAVT----VEVHANGTLFKHTHADADKETAKK 835
++ S+ + I+GK AV+ + V A GT + A+++TA+K
Sbjct: 161 ILLQNALSLPEYSIETIDGKDHEQQFTVVAVSKDLNLRVKAQGT----SRKKAEQKTAEK 216
Query: 836 V 836
+
Sbjct: 217 M 217
>gi|427401798|ref|ZP_18892870.1| ribonuclease 3 [Massilia timonae CCUG 45783]
gi|425719336|gb|EKU82270.1| ribonuclease 3 [Massilia timonae CCUG 45783]
Length = 266
Score = 76.6 bits (187), Expect = 5e-11, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 28/194 (14%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+N++ L++ L Y+FRD LL +ALTH S+ +RLEFLGD+VL+ ++ LY +
Sbjct: 1 MNLQLLQTRLEYTFRDIGLLQQALTHRSHSSLH----NERLEFLGDSVLNCVVASVLYER 56
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+ TL GDL+ +R+ V + K L + + EL F R
Sbjct: 57 FGTLDEGDLSRLRANLVKQQALFEIAQKLDLSQFLRLGEGELKS------GGFRR----- 105
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
P L D +E+L GAIF+DSG + ++V+ PLLE + P T+
Sbjct: 106 ----------PSILADTLEALLGAIFLDSGFDSARDVIRAFYIPLLE-TVDPATLGKDAK 154
Query: 783 RELNEYCQKHHFSM 796
L E+ Q ++
Sbjct: 155 TLLQEFLQAKRIAL 168
>gi|410997180|gb|AFV98645.1| hypothetical protein B649_11670 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 226
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 29/191 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ L+ L Y+F++ LL+EALTH SY + P +RLEFLGDAVLD ++ YLY+K+
Sbjct: 3 NLTTLQERLGYTFQNKELLIEALTHKSY---KQPYNNERLEFLGDAVLDLIVGEYLYSKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
G L+ MR++ VN + + ++ L +I ++ E E+
Sbjct: 60 RGYDEGKLSKMRASLVNEEGFTALALHLDLGGYIYLSNAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE---PMITPETMRLQPA 782
G +++S L + E+L GAI++++G K V E LLE P I+ +++
Sbjct: 103 SG-RTKSSL---LSNAFEALMGAIYLETGLGK--VQEITIDLLEHVHPDISLDSLFKDYK 156
Query: 783 RELNEYCQKHH 793
L E Q H+
Sbjct: 157 TSLQELTQAHY 167
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 33/159 (20%)
Query: 423 LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
L + QN + ++EA+T K ++ ++ E LE LGD+ L + L+ ++ + EG
Sbjct: 11 LGYTFQNKEL----LIEALTHKSYKQPYNNERLEFLGDAVLDLIVGEYLYSKFRGYDEGK 66
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI 542
LS + +++ L L G+I + +NSG
Sbjct: 67 LSKMRASLVNEEGFTALALHLDLGGYIYLSNAEE-------NNSG--------------- 104
Query: 543 YVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLD 580
+ KS +++ EAL+GA +L TG V I +D
Sbjct: 105 ------RTKSSLLSNAFEALMGAIYLETGLGKVQEITID 137
>gi|417315456|ref|ZP_12102132.1| ribonuclease III [Listeria monocytogenes J1816]
gi|328466160|gb|EGF37317.1| ribonuclease III [Listeria monocytogenes J1816]
Length = 222
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ + + F+D LL +A TH SY+ E + +RLEFLGDAVL+ ++ YL+NKYP
Sbjct: 7 LQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSNYLFNKYP 66
Query: 667 TLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
++ G +T MR+A V C +L +H K++ + E
Sbjct: 67 DMAEGHMTKMRAAIV---CEPSLVEFAEAVH---------FSKYVRLG-------KGEEK 107
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G + P L D+ ES GA+++D+G +K V F LE +I P+
Sbjct: 108 AGGRTR---PALLADVFESFIGALYLDNGIDKVVTF------LERVIFPK 148
>gi|332289238|ref|YP_004420090.1| ribonuclease III [Gallibacterium anatis UMN179]
gi|330432134|gb|AEC17193.1| ribonuclease III [Gallibacterium anatis UMN179]
Length = 226
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 40/253 (15%)
Query: 605 VNVRHLESL---LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 661
+N +HL+ L L+Y F+ +LL +ALTH S +RLEFLGD++L++ I L
Sbjct: 1 MNNQHLDRLQNKLSYQFKKMALLQQALTHRSAA----SEHNERLEFLGDSILNFTIGEAL 56
Query: 662 YNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLS 721
Y+++P + GDL+ MR+ V A +++ L +++ EL + R S
Sbjct: 57 YHQFPKSAEGDLSRMRATLVREQTLAQIAIEFDLGEYLKLGPGEL------KSGGYRRSS 110
Query: 722 LESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM---ITPETMR 778
+ L D +E++ GAI++DS N E V E+I + I P +
Sbjct: 111 I---------------LSDCVEAIIGAIYLDS--NFEKVKETILNWYQQRLAEIKPGDNQ 153
Query: 779 LQPARELNEYCQKHHFSMKKTVAPRINGKA-----AVTVEVHANGTLFKHTHADADKETA 833
P L EY Q + I G+A VT ++ + TLF+ + + A
Sbjct: 154 KDPKTRLQEYLQGIRQPLPTYNVVEIKGEAHNQTFKVTCKISQSDTLFEGI--GSSRRKA 211
Query: 834 KKVASKEVLKSLK 846
++ A++++L +LK
Sbjct: 212 EQAAAEKILSALK 224
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 31/166 (18%)
Query: 418 LKNMLLDHCMQNVTIPTSKV--LEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTY 475
+ N LD ++ K+ L+ T + H E LE LGDS L + + L+ +
Sbjct: 1 MNNQHLDRLQNKLSYQFKKMALLQQALTHRSAASEHNERLEFLGDSILNFTIGEALYHQF 60
Query: 476 QNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHS 535
EG LS + ++ L ++ + L +++ P + K SG Y
Sbjct: 61 PKSAEGDLSRMRATLVREQTLAQIAIEFDLGEYLKLGPGELK--------SGGYR----- 107
Query: 536 LFNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLD 580
+S ++D VEA+IGA +L + E V L+
Sbjct: 108 ---------------RSSILSDCVEAIIGAIYLDSNFEKVKETILN 138
>gi|408374675|ref|ZP_11172359.1| ribonuclease III [Alcanivorax hongdengensis A-11-3]
gi|407765483|gb|EKF73936.1| ribonuclease III [Alcanivorax hongdengensis A-11-3]
Length = 220
Score = 76.6 bits (187), Expect = 5e-11, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ Y+F D LL ALTH S R + +RLEFLGDA L +I+ L+N++P + G
Sbjct: 4 IGYTFADSGLLELALTHRS-----ANRRFNNERLEFLGDAQLGQIISTTLFNQFPEATEG 58
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE 731
LT MR++ V AL + GL ++++ EL F R S+
Sbjct: 59 QLTRMRASLVRGQTLALVARDLGLGEYLVLGGGELKS------GGFRRESI--------- 103
Query: 732 TSFPKALGDIIESLSGAIFVDSG---CNKEVVFESIRPLLEPMITPETMRLQPARELNEY 788
L D +E++ GA+ +D G C +E V R L +ITP+T + L E+
Sbjct: 104 ------LADALEAVIGAMLLDGGEAPC-REAVLRLFRDRL-AVITPQTAQKDAKTRLQEW 155
Query: 789 CQKHHFSMKKTVAPRINGKA-AVTVEVHANGTLFKHTHA--DADKETAKKVASKEVLKSL 845
Q F + + + G+A T EV + T + A + A++ A+++ L L
Sbjct: 156 LQARKFELPEYQVESVQGQAPKQTFEVSCAMQQVQQTFSAQGASRRKAEQRAAEQALDWL 215
Query: 846 KASF 849
+ +
Sbjct: 216 EQQY 219
>gi|423067503|ref|ZP_17056293.1| ribonuclease III [Arthrospira platensis C1]
gi|406711077|gb|EKD06279.1| ribonuclease III [Arthrospira platensis C1]
Length = 395
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 93/199 (46%), Gaps = 42/199 (21%)
Query: 608 RHLESLLN-YSFRDPSLLVEALTHGSYML---PEIPRCYQRLEFLGDAVLDYLITVYLYN 663
R L LL F + LL +ALTH SY+ E+ R + LEFLGD+VL+++ YLYN
Sbjct: 164 RELSKLLKKIPFNNLDLLNQALTHSSYLYEHPKEVKRDNELLEFLGDSVLNFISGEYLYN 223
Query: 664 KYPTL-SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
KY ++ + GDLT +RSA V N A + K L ++I RL
Sbjct: 224 KYKSVRNEGDLTKLRSALVENKQLAKFAEKLALQQYI-------------------RLGK 264
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQ-- 780
+ P L + E++ GA F+DSG K V + ++PL + +I T + Q
Sbjct: 265 GAALN-------PSLLSNTFEAMIGAYFLDSGMKK--VQDFLQPLFDSVIAEITSQSQGN 315
Query: 781 -------PARELNEYCQKH 792
L E+ QK+
Sbjct: 316 SGKVAADSKNRLQEWVQKN 334
>gi|115314441|ref|YP_763164.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|122325533|sp|Q0BN07.1|RNC_FRATO RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|115129340|gb|ABI82527.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
Length = 230
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 121/241 (50%), Gaps = 49/241 (20%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
++L Y+F+D +LL+ ALTH S + + Y+RLEFLGD+VL ++I LY ++ L+ G
Sbjct: 10 NILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYKQFTDLAEG 65
Query: 672 DLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWES 730
L+ +RS V A L+S ++ +D + L G +
Sbjct: 66 KLSQLRSKLVKGTTLAQLAS--------------------SLKMDEYIILGASEQGGHKR 105
Query: 731 ETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR-ELNE 787
E K L D+ E++ GAI++DS K+V+ + +P++ I +T++ + ++ +L E
Sbjct: 106 E----KILEDVFEAVIGAIYLDSDFATVKKVILKWYQPIISS-INLDTIKFKDSKSKLQE 160
Query: 788 YCQKHHFSMKKTVAPRINGK--------AAVT----VEVHANGTLFKHTHADADKETAKK 835
++ S+ + I+GK AV+ + V A GT + A+++TA+K
Sbjct: 161 ILLQNALSLPEYSIETIDGKDHEQQFTVVAVSKDLNLRVKAQGT----SRKKAEQKTAEK 216
Query: 836 V 836
+
Sbjct: 217 M 217
>gi|389573284|ref|ZP_10163359.1| ribonuclease III [Bacillus sp. M 2-6]
gi|388426981|gb|EIL84791.1| ribonuclease III [Bacillus sp. M 2-6]
Length = 247
Score = 76.6 bits (187), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 40/186 (21%)
Query: 598 QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLD 654
Q Q+++L R + ++ F++ LL +A TH SY+ + Y+ RLEFLGDAVL+
Sbjct: 9 QKQSKKLEQFREFQQRISVHFKNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLE 68
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
I+ +L+ KYP +S GDLT +R+A V +L S+ H L
Sbjct: 69 LTISQFLFAKYPAMSEGDLTKLRAAIVCEP--SLVSLAHEL------------------- 107
Query: 715 DSFERLSL-----ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
SF L L E T G + P L D+ E+ GA+++D G E + LE
Sbjct: 108 -SFGDLVLLGKGEEMTGGRKR----PALLADVFEAFIGALYLDQG------LEPVERFLE 156
Query: 770 PMITPE 775
+ P+
Sbjct: 157 AYVYPK 162
>gi|381403650|ref|ZP_09928334.1| ribonuclease III [Pantoea sp. Sc1]
gi|380736849|gb|EIB97912.1| ribonuclease III [Pantoea sp. Sc1]
Length = 226
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y+F LL +ALTH S + +RLEFLGD++L Y+I LY+++P
Sbjct: 6 INKLQRKLGYTFTHSELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNK--EVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G IF+DS + +++ + R L+ I+P + P
Sbjct: 112 -----------LADTVEALIGGIFLDSSIERVEQLILDWYRTRLDE-ISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q H + + ++ G+A
Sbjct: 160 LQEYLQGRHLPLPSYLVVQVRGEA 183
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
T S++L+ T + H E LE LGDS L Y + L+ + EG +S + +
Sbjct: 16 TFTHSELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATL 75
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ L ++ + L +R P + K SG +
Sbjct: 76 VRGNTLAEMAREFDLGECLRLGPGELK--------SGGFR-------------------- 107
Query: 551 KSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 596
+ +AD VEALIG FL + E V + LD ++D ++ P ++Q
Sbjct: 108 RESILADTVEALIGGIFLDSSIERVEQLILDWYRTRLDEIS-PGDKQ 153
>gi|205355648|ref|ZP_03222418.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346425|gb|EDZ33058.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8421]
Length = 225
Score = 76.6 bits (187), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 4 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 58
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A + L IL + E E
Sbjct: 59 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAE-----------------E 101
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 102 NNGGKEK----PSILSDTLEAIIGAIHLEAG 128
>gi|152986476|ref|YP_001350091.1| ribonuclease III [Pseudomonas aeruginosa PA7]
gi|452876796|ref|ZP_21954132.1| ribonuclease III [Pseudomonas aeruginosa VRFPA01]
gi|189043330|sp|A6VAK6.1|RNC_PSEA7 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|150961634|gb|ABR83659.1| ribonuclease III [Pseudomonas aeruginosa PA7]
gi|452186403|gb|EME13421.1| ribonuclease III [Pseudomonas aeruginosa VRFPA01]
Length = 229
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 28/200 (14%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE L Y+F+D L+V ALTH SY R +RLEFLGDA+L+++I L++ +P
Sbjct: 8 LERKLGYTFKDQDLMVLALTHRSYA----GRNNERLEFLGDAILNFVIGEALFHHFPQAR 63
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G L+ +R+ V + AL + + ++ S EL F R S+
Sbjct: 64 EGQLSRLRARLVKGETLALLARGFEVGDYLRLGSGELKSG------GFRRESI------- 110
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
L D +E+L GAI++D+G + +E + + P L + TP P L E
Sbjct: 111 --------LADAMEALIGAIYLDTGMDSARERIIAWLGPQLREL-TPVDTNKDPKTRLQE 161
Query: 788 YCQKHHFSMKKTVAPRINGK 807
+ Q + + I G+
Sbjct: 162 FLQSRGCDLPRYEVVDIQGE 181
>gi|419659778|ref|ZP_14190291.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-979]
gi|419667284|ref|ZP_14197262.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-10]
gi|380638585|gb|EIB56135.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-979]
gi|380646268|gb|EIB63243.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-10]
Length = 224
Score = 76.6 bits (187), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A + L IL + E E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAE-----------------E 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDTLEAIIGAIHLEAG 127
>gi|86149260|ref|ZP_01067491.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596211|ref|ZP_01099448.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
gi|218563224|ref|YP_002345004.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC 11168 =
ATCC 700819]
gi|317511632|ref|ZP_07968930.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 305]
gi|384448848|ref|YP_005656899.1| ribonuclease III [Campylobacter jejuni subsp. jejuni IA3902]
gi|403056346|ref|YP_006633751.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407942970|ref|YP_006858617.1| ribonuclease III [Campylobacter jejuni subsp. jejuni PT14]
gi|415731373|ref|ZP_11473447.1| ribonuclease III [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|419620986|ref|ZP_14154381.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51494]
gi|419623819|ref|ZP_14156940.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|419625061|ref|ZP_14158085.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|419628386|ref|ZP_14161245.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23263]
gi|419629909|ref|ZP_14162621.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 60004]
gi|419630965|ref|ZP_14163565.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|419633703|ref|ZP_14166131.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|419635954|ref|ZP_14168241.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 55037]
gi|419637815|ref|ZP_14169964.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639421|ref|ZP_14171450.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 86605]
gi|419645376|ref|ZP_14176925.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|419647079|ref|ZP_14178522.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 53161]
gi|419649109|ref|ZP_14180411.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|419650140|ref|ZP_14181366.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419651560|ref|ZP_14182656.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-894]
gi|419656399|ref|ZP_14187201.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-988]
gi|419658399|ref|ZP_14189029.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-1]
gi|419661780|ref|ZP_14192099.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-831]
gi|419663951|ref|ZP_14194134.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-4]
gi|419671772|ref|ZP_14201414.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-14]
gi|419673128|ref|ZP_14202607.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51037]
gi|419675820|ref|ZP_14205079.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 110-21]
gi|419677786|ref|ZP_14206919.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87330]
gi|419679551|ref|ZP_14208544.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87459]
gi|419681434|ref|ZP_14210268.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 140-16]
gi|419684794|ref|ZP_14213374.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1577]
gi|419687924|ref|ZP_14216256.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1854]
gi|419690916|ref|ZP_14219105.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1893]
gi|419696155|ref|ZP_14224025.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|424849058|ref|ZP_18273527.1| ribonuclease III [Campylobacter jejuni subsp. jejuni D2600]
gi|22654076|sp|Q9PM40.1|RNC_CAMJE RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|85840042|gb|EAQ57300.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191052|gb|EAQ95024.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360931|emb|CAL35732.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC 11168 =
ATCC 700819]
gi|284926829|gb|ADC29181.1| ribonuclease III [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927617|gb|EFV06948.1| ribonuclease III [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315928870|gb|EFV08132.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 305]
gi|356487695|gb|EHI17637.1| ribonuclease III [Campylobacter jejuni subsp. jejuni D2600]
gi|380597882|gb|EIB18338.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51494]
gi|380599969|gb|EIB20317.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|380604482|gb|EIB24496.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23263]
gi|380605405|gb|EIB25378.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|380606913|gb|EIB26800.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 60004]
gi|380611214|gb|EIB30771.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 55037]
gi|380611347|gb|EIB30900.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|380611932|gb|EIB31472.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380614766|gb|EIB34092.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380616423|gb|EIB35627.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 86605]
gi|380620465|gb|EIB39355.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|380621996|gb|EIB40766.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 53161]
gi|380625526|gb|EIB44108.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380628846|gb|EIB47133.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380631159|gb|EIB49369.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-894]
gi|380633483|gb|EIB51436.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-1]
gi|380635405|gb|EIB53222.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380639431|gb|EIB56924.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-831]
gi|380641974|gb|EIB59278.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-4]
gi|380648961|gb|EIB65749.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-14]
gi|380651181|gb|EIB67749.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 110-21]
gi|380653448|gb|EIB69868.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87330]
gi|380654393|gb|EIB70755.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51037]
gi|380657044|gb|EIB73153.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87459]
gi|380658109|gb|EIB74142.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 140-16]
gi|380666172|gb|EIB81720.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1577]
gi|380666470|gb|EIB82007.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1854]
gi|380668031|gb|EIB83415.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1893]
gi|380675351|gb|EIB90258.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|401781998|emb|CCK67709.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407906808|gb|AFU43637.1| ribonuclease III [Campylobacter jejuni subsp. jejuni PT14]
Length = 224
Score = 76.6 bits (187), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A + L IL + E E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAE-----------------E 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|328766772|gb|EGF76825.1| hypothetical protein BATDEDRAFT_28342 [Batrachochytrium
dendrobatidis JAM81]
Length = 460
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
LV+ + + ++ +QRLEFLGDAVL YL +LY P L+PG L+ +R+ V N
Sbjct: 123 LVDIMDYNHSGTGKLGSIFQRLEFLGDAVLSYLAMQHLYKITPPLNPGGLSKLRAELVCN 182
Query: 684 DCYALSSVKHGLHKHILH-------ASQELYKWINITVDSFERLSL----------ESTF 726
A S++ GL K+I H A W+ + S SL +
Sbjct: 183 QFLACVSIQIGLVKYIRHTDMTMEAAIGRFTAWVQGYLASESSTSLPISTSATQIASARL 242
Query: 727 GWESETSFPKALGDIIESLSGAIFVDS 753
W + PK GD+ ES+ GA+FVDS
Sbjct: 243 FWNKGNTAPKTAGDVYESMLGAVFVDS 269
>gi|209525933|ref|ZP_03274467.1| Ribonuclease III [Arthrospira maxima CS-328]
gi|209493610|gb|EDZ93931.1| Ribonuclease III [Arthrospira maxima CS-328]
Length = 395
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 33/174 (18%)
Query: 608 RHLESLLN-YSFRDPSLLVEALTHGSYML---PEIPRCYQRLEFLGDAVLDYLITVYLYN 663
R L LL F++ LL ALTH SY+ E+ R + LEFLGD+VL+++ YLYN
Sbjct: 164 RELSKLLKKIPFQNVDLLNHALTHSSYLYEHPKEVKRDNELLEFLGDSVLNFISGEYLYN 223
Query: 664 KYPTL-SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
KY ++ + GDLT +RSA V N A + K L ++I RL
Sbjct: 224 KYKSVRNEGDLTKLRSALVENKQLAKFAEKLALQQYI-------------------RLGK 264
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET 776
+ P L + E++ GA F+DSG K V E ++PL + +I T
Sbjct: 265 GAALN-------PSLLSNTFEAMIGAYFLDSGMKK--VQEFLQPLFDSVIAEIT 309
>gi|19072786|gb|AAL84638.1|AF484524_1 endoribonuclease Dicer [Mus musculus x Mus spretus]
Length = 1539
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1281 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYHDAHEGRLSYMRSKKVSNCNL 1340
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1341 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1368
>gi|323144165|ref|ZP_08078801.1| ribonuclease III [Succinatimonas hippei YIT 12066]
gi|322416073|gb|EFY06771.1| ribonuclease III [Succinatimonas hippei YIT 12066]
Length = 233
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 39/244 (15%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE + Y+F++ SLL +ALTH S+ P +RLEFLGD++L +I LY +P
Sbjct: 12 QLEITIGYAFQNLSLLEQALTHRSFG----PVHNERLEFLGDSILGMVIAKKLYAMFPHN 67
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
GDLT MRS+ V A + + GL + EL T G
Sbjct: 68 PEGDLTRMRSSLVRETTLAELAREFGLGNCLRLGPGEL-----------------KTGGA 110
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP-------MITPETMRLQP 781
++ L D +ES+ A+++DSG F+++R ++ I P+ + P
Sbjct: 111 RRDS----LLADAVESVIAAMYLDSGEE----FDTVRQIVLSWFHSRLKTINPKVNQKDP 162
Query: 782 ARELNEYCQKHHFSMKKTVAPRING---KAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
L E Q H + + I+G TVEV G K + + K A++VA+
Sbjct: 163 KSSLQELLQSQHKPLPQYKVVNISGTDNDQVFTVEVCVEGVSEKFSGKGSSKRRAEQVAA 222
Query: 839 KEVL 842
+ +L
Sbjct: 223 QHLL 226
>gi|448929405|gb|AGE52973.1| RNase III [Paramecium bursaria Chlorella virus CZ-2]
gi|448929751|gb|AGE53318.1| RNase III [Paramecium bursaria Chlorella virus Fr5L]
gi|448935668|gb|AGE59218.1| RNase III [Paramecium bursaria Chlorella virus OR0704.2.2]
Length = 252
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 25/236 (10%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
H+ L+ D L V A ++ + E ++RLEFLGD+VL +LI YLY+ +P
Sbjct: 30 HIAHLVGMPVVDFGLYVTAFSYNPIL--EGGETFERLEFLGDSVLGFLIAKYLYDTFPGK 87
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ G LT +R V+ + ++ GLH +I+ + + LY+ GW
Sbjct: 88 NEGILTRIRVKFVSGKFLSKLALNLGLHNYIIMSQKGLYR------------------GW 129
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEY 788
+ PK L D E+L GAI++D G N F I + L ++
Sbjct: 130 NTN---PKILEDAFEALIGAIYLDGGINAAKQFFMTTLSRHANIQELLLDSNHKDRLAKH 186
Query: 789 CQKHHFSMKKTVA--PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
C++ + V R + V VH +G F K+ + +K +L
Sbjct: 187 CRRLSMGRPEFVIQFERGGANSLFIVGVHVDGNKFAEGSGTTRKDAEQDACNKALL 242
>gi|319957798|ref|YP_004169061.1| RNAse iii [Nitratifractor salsuginis DSM 16511]
gi|319420202|gb|ADV47312.1| RNAse III [Nitratifractor salsuginis DSM 16511]
Length = 226
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 24/149 (16%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N LE L Y F++P L+VEALTH SY + P +RLEFLGDAVLD ++ +L++K+
Sbjct: 3 NYHELERRLGYEFKNPQLIVEALTHKSY---KKPYNNERLEFLGDAVLDLIVGEFLFHKF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P G L+ +R++ VN +A + L ++I + E E+
Sbjct: 60 PQSDEGVLSKIRASLVNESGFATLARAIDLGRYIYLSPAE-----------------ENN 102
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
G S P L + E++ GAI++++G
Sbjct: 103 QGR----SKPSLLSNAFEAVIGAIYLEAG 127
>gi|187735104|ref|YP_001877216.1| Ribonuclease III [Akkermansia muciniphila ATCC BAA-835]
gi|187425156|gb|ACD04435.1| Ribonuclease III [Akkermansia muciniphila ATCC BAA-835]
Length = 231
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSY-MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
+N LE L Y F +P LLV+ALTH S PE R Y+RLEFLGDA+L +T YLY+
Sbjct: 1 MNHTALEDKLGYRFNNPDLLVQALTHPSTDSKPETRRAYERLEFLGDAILQLAVTQYLYH 60
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI 699
P G+LT +R+ +V+ GL KHI
Sbjct: 61 HMPQSPEGELTQLRARTVSRANLGKYGFILGLDKHI 96
>gi|134301463|ref|YP_001121431.1| ribonuclease III [Francisella tularensis subsp. tularensis
WY96-3418]
gi|189043317|sp|A4IWK9.1|RNC_FRATW RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|134049240|gb|ABO46311.1| ribonuclease III [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 230
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 49/241 (20%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
++L Y+F+D +LL+ ALTH S + + Y+RLEFLGD+VL ++I LY ++ L+ G
Sbjct: 10 NILGYNFKDCTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYKQFTDLAEG 65
Query: 672 DLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWES 730
L+ +RS V A L+S ++ +D + L G +
Sbjct: 66 KLSQLRSKLVKGTTLAQLAS--------------------SLKMDEYIILGASEQGGHKR 105
Query: 731 ETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR-ELNE 787
E K L D+ E++ GAI++DS K+V+ + +P++ I +T++++ ++ +L E
Sbjct: 106 E----KILEDVFEAVIGAIYLDSDFATVKKVILKWYQPIISS-INLDTIKVKDSKSKLQE 160
Query: 788 YCQKHHFSMKKTVAPRINGK--------AAVT----VEVHANGTLFKHTHADADKETAKK 835
++ S+ + I+GK AV+ + V A GT + A+++TA+K
Sbjct: 161 ILLQNALSLPEYSIETIDGKDHEQQFTVVAVSKDLNLRVKAQGT----SRKKAEQKTAEK 216
Query: 836 V 836
+
Sbjct: 217 M 217
>gi|30021937|ref|NP_833568.1| ribonuclease III [Bacillus cereus ATCC 14579]
gi|206971258|ref|ZP_03232209.1| ribonuclease III [Bacillus cereus AH1134]
gi|218232410|ref|YP_002368650.1| ribonuclease III [Bacillus cereus B4264]
gi|218899002|ref|YP_002447413.1| ribonuclease III [Bacillus cereus G9842]
gi|228902352|ref|ZP_04066509.1| Ribonuclease 3 [Bacillus thuringiensis IBL 4222]
gi|228909674|ref|ZP_04073497.1| Ribonuclease 3 [Bacillus thuringiensis IBL 200]
gi|228922603|ref|ZP_04085903.1| Ribonuclease 3 [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228954126|ref|ZP_04116154.1| Ribonuclease 3 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228960065|ref|ZP_04121729.1| Ribonuclease 3 [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228973866|ref|ZP_04134442.1| Ribonuclease 3 [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228980456|ref|ZP_04140766.1| Ribonuclease 3 [Bacillus thuringiensis Bt407]
gi|229047536|ref|ZP_04193126.1| Ribonuclease 3 [Bacillus cereus AH676]
gi|229071347|ref|ZP_04204570.1| Ribonuclease 3 [Bacillus cereus F65185]
gi|229081104|ref|ZP_04213614.1| Ribonuclease 3 [Bacillus cereus Rock4-2]
gi|229111320|ref|ZP_04240873.1| Ribonuclease 3 [Bacillus cereus Rock1-15]
gi|229129125|ref|ZP_04258098.1| Ribonuclease 3 [Bacillus cereus BDRD-Cer4]
gi|229146420|ref|ZP_04274791.1| Ribonuclease 3 [Bacillus cereus BDRD-ST24]
gi|229152048|ref|ZP_04280243.1| Ribonuclease 3 [Bacillus cereus m1550]
gi|229180125|ref|ZP_04307469.1| Ribonuclease 3 [Bacillus cereus 172560W]
gi|229192018|ref|ZP_04318988.1| Ribonuclease 3 [Bacillus cereus ATCC 10876]
gi|296504344|ref|YP_003666044.1| ribonuclease III [Bacillus thuringiensis BMB171]
gi|384187909|ref|YP_005573805.1| ribonuclease III [Bacillus thuringiensis serovar chinensis CT-43]
gi|402558825|ref|YP_006601549.1| ribonuclease III [Bacillus thuringiensis HD-771]
gi|410676223|ref|YP_006928594.1| ribonuclease 3 [Bacillus thuringiensis Bt407]
gi|423359115|ref|ZP_17336618.1| ribonuclease 3 [Bacillus cereus VD022]
gi|423385352|ref|ZP_17362608.1| ribonuclease 3 [Bacillus cereus BAG1X1-2]
gi|423412346|ref|ZP_17389466.1| ribonuclease 3 [Bacillus cereus BAG3O-2]
gi|423425985|ref|ZP_17403016.1| ribonuclease 3 [Bacillus cereus BAG3X2-2]
gi|423431869|ref|ZP_17408873.1| ribonuclease 3 [Bacillus cereus BAG4O-1]
gi|423437304|ref|ZP_17414285.1| ribonuclease 3 [Bacillus cereus BAG4X12-1]
gi|423503473|ref|ZP_17480065.1| ribonuclease 3 [Bacillus cereus HD73]
gi|423528290|ref|ZP_17504735.1| ribonuclease 3 [Bacillus cereus HuB1-1]
gi|423561745|ref|ZP_17538021.1| ribonuclease 3 [Bacillus cereus MSX-A1]
gi|423582059|ref|ZP_17558170.1| ribonuclease 3 [Bacillus cereus VD014]
gi|423585742|ref|ZP_17561829.1| ribonuclease 3 [Bacillus cereus VD045]
gi|423628942|ref|ZP_17604691.1| ribonuclease 3 [Bacillus cereus VD154]
gi|423635380|ref|ZP_17611033.1| ribonuclease 3 [Bacillus cereus VD156]
gi|423641070|ref|ZP_17616688.1| ribonuclease 3 [Bacillus cereus VD166]
gi|423649712|ref|ZP_17625282.1| ribonuclease 3 [Bacillus cereus VD169]
gi|423656708|ref|ZP_17632007.1| ribonuclease 3 [Bacillus cereus VD200]
gi|434376952|ref|YP_006611596.1| ribonuclease III [Bacillus thuringiensis HD-789]
gi|449090792|ref|YP_007423233.1| ribonuclease III [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452200288|ref|YP_007480369.1| Ribonuclease III [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|38372411|sp|Q819V8.1|RNC_BACCR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|226735367|sp|B7IUK8.1|RNC_BACC2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|226735368|sp|B7HDX2.1|RNC_BACC4 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|29897493|gb|AAP10769.1| Ribonuclease III [Bacillus cereus ATCC 14579]
gi|206734030|gb|EDZ51201.1| ribonuclease III [Bacillus cereus AH1134]
gi|218160367|gb|ACK60359.1| ribonuclease III [Bacillus cereus B4264]
gi|218544165|gb|ACK96559.1| ribonuclease III [Bacillus cereus G9842]
gi|228591569|gb|EEK49418.1| Ribonuclease 3 [Bacillus cereus ATCC 10876]
gi|228603334|gb|EEK60811.1| Ribonuclease 3 [Bacillus cereus 172560W]
gi|228631397|gb|EEK88031.1| Ribonuclease 3 [Bacillus cereus m1550]
gi|228637053|gb|EEK93512.1| Ribonuclease 3 [Bacillus cereus BDRD-ST24]
gi|228654362|gb|EEL10227.1| Ribonuclease 3 [Bacillus cereus BDRD-Cer4]
gi|228672096|gb|EEL27387.1| Ribonuclease 3 [Bacillus cereus Rock1-15]
gi|228702148|gb|EEL54624.1| Ribonuclease 3 [Bacillus cereus Rock4-2]
gi|228711801|gb|EEL63753.1| Ribonuclease 3 [Bacillus cereus F65185]
gi|228723783|gb|EEL75138.1| Ribonuclease 3 [Bacillus cereus AH676]
gi|228779276|gb|EEM27533.1| Ribonuclease 3 [Bacillus thuringiensis Bt407]
gi|228785891|gb|EEM33894.1| Ribonuclease 3 [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228799581|gb|EEM46534.1| Ribonuclease 3 [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228805446|gb|EEM52037.1| Ribonuclease 3 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228837032|gb|EEM82373.1| Ribonuclease 3 [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228849963|gb|EEM94794.1| Ribonuclease 3 [Bacillus thuringiensis IBL 200]
gi|228857321|gb|EEN01824.1| Ribonuclease 3 [Bacillus thuringiensis IBL 4222]
gi|296325396|gb|ADH08324.1| ribonuclease III [Bacillus thuringiensis BMB171]
gi|326941618|gb|AEA17514.1| ribonuclease III [Bacillus thuringiensis serovar chinensis CT-43]
gi|401084987|gb|EJP93233.1| ribonuclease 3 [Bacillus cereus VD022]
gi|401104414|gb|EJQ12391.1| ribonuclease 3 [Bacillus cereus BAG3O-2]
gi|401110732|gb|EJQ18631.1| ribonuclease 3 [Bacillus cereus BAG3X2-2]
gi|401116625|gb|EJQ24463.1| ribonuclease 3 [Bacillus cereus BAG4O-1]
gi|401120459|gb|EJQ28255.1| ribonuclease 3 [Bacillus cereus BAG4X12-1]
gi|401202002|gb|EJR08867.1| ribonuclease 3 [Bacillus cereus MSX-A1]
gi|401212938|gb|EJR19679.1| ribonuclease 3 [Bacillus cereus VD014]
gi|401233088|gb|EJR39584.1| ribonuclease 3 [Bacillus cereus VD045]
gi|401268487|gb|EJR74535.1| ribonuclease 3 [Bacillus cereus VD154]
gi|401278131|gb|EJR84067.1| ribonuclease 3 [Bacillus cereus VD156]
gi|401280131|gb|EJR86053.1| ribonuclease 3 [Bacillus cereus VD166]
gi|401282992|gb|EJR88889.1| ribonuclease 3 [Bacillus cereus VD169]
gi|401290449|gb|EJR96143.1| ribonuclease 3 [Bacillus cereus VD200]
gi|401635408|gb|EJS53163.1| ribonuclease 3 [Bacillus cereus BAG1X1-2]
gi|401787477|gb|AFQ13516.1| ribonuclease III [Bacillus thuringiensis HD-771]
gi|401875509|gb|AFQ27676.1| ribonuclease III [Bacillus thuringiensis HD-789]
gi|402451953|gb|EJV83772.1| ribonuclease 3 [Bacillus cereus HuB1-1]
gi|402459694|gb|EJV91431.1| ribonuclease 3 [Bacillus cereus HD73]
gi|409175352|gb|AFV19657.1| ribonuclease 3 [Bacillus thuringiensis Bt407]
gi|449024549|gb|AGE79712.1| ribonuclease III [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452105681|gb|AGG02621.1| Ribonuclease III [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 245
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 36/167 (21%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ +F D LL++A TH SY+ + ++ RLEFLGDAVL+ ++ YL+ KYPT+S
Sbjct: 26 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSE 85
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-----EST 725
G+LT +R+A V C ++ + EL SF L L E T
Sbjct: 86 GELTKLRAAIV---C----------EPSLVRFANEL---------SFGSLVLLGKGEEMT 123
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
G E P L D+ E+ GA+++D G E V+E ++ ++ P I
Sbjct: 124 GGRER----PALLADVFEAFIGALYLDQGL--ETVWEFLKEIVYPKI 164
>gi|440738767|ref|ZP_20918291.1| ribonuclease III [Pseudomonas fluorescens BRIP34879]
gi|440380581|gb|ELQ17143.1| ribonuclease III [Pseudomonas fluorescens BRIP34879]
Length = 229
Score = 76.3 bits (186), Expect = 7e-11, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
V++ LE L Y+F+D L+V ALTH S+ R +RLEFLGDAVL++ L+ +
Sbjct: 3 VSLSRLERQLGYTFKDQELMVLALTHRSFA----GRNNERLEFLGDAVLNFAAGEALFER 58
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P G L+ +R+ V + A+ + GL +++ S EL F R S+
Sbjct: 59 FPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKS------GGFRRESI-- 110
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L GAI++D+G KE V + +E + +T + P
Sbjct: 111 -------------LADALEALIGAIYLDAGMETAKERVVAWLASEIESLTLVDTNK-DPK 156
Query: 783 RELNEYCQKHHFSMKKTVAPRINGK 807
L EY Q + + I G+
Sbjct: 157 TRLQEYLQSRGCELPRYEVVDIQGE 181
Score = 40.4 bits (93), Expect = 3.8, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
T + G + E LE LGD+ L +AA + LF+ + EG LS + R++ L L
Sbjct: 27 THRSFAGRNNERLEFLGDAVLNFAAGEALFERFPQAREGQLSRLRARLVKGETLAVLARG 86
Query: 503 HKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEAL 562
L ++R GS EL E +AD +EAL
Sbjct: 87 FGLGEYLRL---------------GSGELKSGGFRRE-------------SILADALEAL 118
Query: 563 IGA-FLSTGGE 572
IGA +L G E
Sbjct: 119 IGAIYLDAGME 129
>gi|427722715|ref|YP_007069992.1| RNAse III [Leptolyngbya sp. PCC 7376]
gi|427354435|gb|AFY37158.1| RNAse III [Leptolyngbya sp. PCC 7376]
Length = 258
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 28/170 (16%)
Query: 618 FRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
FRD LL +ALTH SY PE+ + +RLEFLGDAVL +++ LY ++P L G+L+
Sbjct: 7 FRDEGLLTQALTHSSYCNEHPEVKQDNERLEFLGDAVLKFVMGKLLYEQFPELQEGELSR 66
Query: 676 MRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFP 735
+R+ NN +H L + ++ +DS RL + T + + P
Sbjct: 67 LRAGLENN--------RHQLATFAM----------DLGLDSLLRLG-KGTENIGARQN-P 106
Query: 736 KALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAREL 785
+ L D E++ GA F+D+G + + F +E ++ P ++L EL
Sbjct: 107 EILSDAFEAIVGAYFLDAGIDLAIAF------VEELVLPIAVKLAAQPEL 150
>gi|269140067|ref|YP_003296768.1| ribonuclease III [Edwardsiella tarda EIB202]
gi|387868582|ref|YP_005700051.1| Ribonuclease III [Edwardsiella tarda FL6-60]
gi|267985728|gb|ACY85557.1| ribonuclease III [Edwardsiella tarda EIB202]
gi|304559895|gb|ADM42559.1| Ribonuclease III [Edwardsiella tarda FL6-60]
Length = 226
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+FR LL++ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 4 IVINRLQRKLGYTFRQQDLLMQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHR 59
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 60 FPRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKS------GGFRRESI-- 111
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L G IF+DS + ++ + LE I+P + P
Sbjct: 112 -------------LADTVEALIGGIFLDSDIQTIERLILDWYHSRLEE-ISPGDKQKDPK 157
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA 808
L E+ Q H + + ++ G+A
Sbjct: 158 TRLQEFLQGRHLPLPSYLVVQVRGEA 183
>gi|40063418|gb|AAR38229.1| ribonuclease III [uncultured marine bacterium 580]
Length = 231
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
++ LE + Y F+D LL A+TH S+ +RLEFLGD++L++++ L+ K+
Sbjct: 6 LKILEKSIKYKFKDDKLLALAMTHRSHS----GMNNERLEFLGDSILNFVVADLLFKKFN 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
L GDL+ +RS V + LS + + L ++ ++N+ V + +
Sbjct: 62 DLDEGDLSRLRSQLVKEE--PLSKLGNEL---------KIGDFLNLGVGELK------SS 104
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF--ESIRPLLEPMITPETMRLQPARE 784
GW P L D E+L GAIF+D G F +S L+E I P+ + P
Sbjct: 105 GWRR----PSILADAFEALIGAIFIDGGMKSAYKFIEDSYADLIEK-INPKEIYKDPKTI 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEV 841
L E+ Q + + G+A TV + K ++ A++ A+KE
Sbjct: 160 LQEFLQAQKVPLPSYEVINVEGEAHNQLFTVTCVVSKFDVKVEGGGRSRKIAEQEAAKEA 219
Query: 842 LKSLKASFPG 851
+ +++ S G
Sbjct: 220 MATIEKSLYG 229
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Query: 436 KVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAA 495
K+L T + G + E LE LGDS L + + LFK + + EG LS + +++
Sbjct: 21 KLLALAMTHRSHSGMNNERLEFLGDSILNFVVADLLFKKFNDLDEGDLSRLRSQLVKEEP 80
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTV 555
L KLG + K+ F+ N G EL +G + + +
Sbjct: 81 LSKLGNELKIGDFL---------------NLGVGELKS-----------SGWR--RPSIL 112
Query: 556 ADVVEALIGAFLSTGGENVGLIFLD 580
AD EALIGA GG F++
Sbjct: 113 ADAFEALIGAIFIDGGMKSAYKFIE 137
>gi|419542137|ref|ZP_14081268.1| ribonuclease III [Campylobacter coli 2548]
gi|380523896|gb|EIA49530.1| ribonuclease III [Campylobacter coli 2548]
Length = 224
Score = 76.3 bits (186), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A + L I ++ E E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAE-----------------E 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|423682137|ref|ZP_17656976.1| ribonuclease III [Bacillus licheniformis WX-02]
gi|383438911|gb|EID46686.1| ribonuclease III [Bacillus licheniformis WX-02]
Length = 253
Score = 76.3 bits (186), Expect = 7e-11, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 37/176 (21%)
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGD 650
++ FQ +AE+ + + ++ F++ LL +A TH SY+ + Y+ RLEFLGD
Sbjct: 14 KKMFQKKAEQF---KKFQERISVQFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGD 70
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVL+ I+ +LY KYP +S GDLT +R+A V +L S+ H L
Sbjct: 71 AVLELTISQFLYAKYPAMSEGDLTKLRAAIVCEP--SLVSLAHEL--------------- 113
Query: 711 NITVDSFERLSL-----ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
SF L L E T G + P L D+ E+ GA+++D G V F
Sbjct: 114 -----SFGELVLLGKGEEMTGGRKR----PALLADVFEAFIGALYLDQGLEAVVTF 160
>gi|167627437|ref|YP_001677937.1| ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|189043314|sp|B0TXH8.1|RNC_FRAP2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|167597438|gb|ABZ87436.1| Ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 230
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 45/242 (18%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L +L YSF++ +LLV ALTH S + + Y+RLEFLGD++L ++I LY ++P L
Sbjct: 7 RLYKILGYSFKNYTLLVRALTHRS----KTKKNYERLEFLGDSILGFVIAEVLYMEFPDL 62
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ G L+ +RS V A ++ L ++I+ + E G
Sbjct: 63 AEGKLSQIRSKLVKGVTLANLALNFKLDEYIILGASE-------------------QGGH 103
Query: 729 ESETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPARELN 786
+ E K L D+ E++ GAI++DS K+V+ +P++ + + +L
Sbjct: 104 KRE----KILEDVFEAIIGAIYLDSDFATVKKVIVNWYKPVISTLNLDDVKVKDSKSKLQ 159
Query: 787 EYCQKHHFSMKKTVAPRINGK------------AAVTVEVHANGTLFKHTHADADKETAK 834
E ++ S+ + I+GK + +EV A GT + A+++ A+
Sbjct: 160 EILLQNGLSLPEYSIETIDGKDHEQEFTVKALSNDLNIEVRAKGT----SRKKAEQKAAE 215
Query: 835 KV 836
K+
Sbjct: 216 KM 217
>gi|417851881|ref|ZP_12497549.1| ribonuclease III [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|338218195|gb|EGP03985.1| ribonuclease III [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
Length = 225
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ L+ + Y F P+LL +ALTH S + + +RLEFLGDA+L+++I LY+++
Sbjct: 4 NLERLQRQIGYQFNQPALLKQALTHRSAAV----KHNERLEFLGDAILNFIIAEALYHQF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P + G+L+ MR+ V A + + L ++ EL F R S+
Sbjct: 60 PKCNEGELSRMRATLVREPTLASLARQFELGDYLSLGPGEL------KSGGFRRESI--- 110
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR 783
L D +E++ GAI +DS ++V + L+ I P + P
Sbjct: 111 ------------LADCVEAIIGAISLDSDLATTTKIVQHWYQAQLK-QIQPGDNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + I G+A TVE + + A + A++ A+++
Sbjct: 158 RLQEYLQGKRLPLPTYNVVEIKGEAHCQTFTVECYVKNIDRTFMGSGASRRKAEQAAAEK 217
Query: 841 VLKSLK 846
+L+ L+
Sbjct: 218 ILQELE 223
>gi|157692273|ref|YP_001486735.1| ribonuclease III [Bacillus pumilus SAFR-032]
gi|157681031|gb|ABV62175.1| ribonuclease III [Bacillus pumilus SAFR-032]
Length = 247
Score = 76.3 bits (186), Expect = 7e-11, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 40/186 (21%)
Query: 598 QVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLD 654
Q Q+++L R + ++ F++ LL +A TH SY+ + Y+ RLEFLGDAVL+
Sbjct: 9 QKQSKKLEQFREFQQRISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLE 68
Query: 655 YLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV 714
I+ +L+ KYP +S GDLT +R+A V +L S+ H L
Sbjct: 69 LTISQFLFAKYPAMSEGDLTKLRAAIVCEP--SLVSLAHEL------------------- 107
Query: 715 DSFERLSL-----ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
SF L L E T G + P L D+ E+ GA+++D G E + LE
Sbjct: 108 -SFGDLVLLGKGEEMTGGRKR----PALLADVFEAFIGALYLDQG------LEPVERFLE 156
Query: 770 PMITPE 775
+ P+
Sbjct: 157 AYVYPK 162
>gi|51892591|ref|YP_075282.1| ribonuclease III [Symbiobacterium thermophilum IAM 14863]
gi|81388984|sp|Q67PF5.1|RNC_SYMTH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|51856280|dbj|BAD40438.1| ribonuclease III [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 76.3 bits (186), Expect = 7e-11, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 25/143 (17%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
L Y FRD SLL+EALTH +Y E PR +RLEFLGD+VL +I +LY +YP L G
Sbjct: 18 LGYEFRDESLLLEALTHTTYA-NEHPRARANERLEFLGDSVLGMVIAAHLYERYPDLPEG 76
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESE 731
+LT +R+A V A + G+ +H+ E V +R S
Sbjct: 77 ELTKIRAAVVCEPSLAERARVLGIGRHMRFGRGE-------AVSGRDRDS---------- 119
Query: 732 TSFPKALGDIIESLSGAIFVDSG 754
L D E++ GA+++D G
Sbjct: 120 -----TLSDAFEAVVGALYLDGG 137
>gi|307448396|pdb|3O2R|B Chain B, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
gi|307448398|pdb|3O2R|D Chain D, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
Length = 144
Score = 76.3 bits (186), Expect = 8e-11, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 27/151 (17%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 1 NIEKLEQSLTYEFKDKNLLIHALTHKSFX----KKSYNNERLEFLGDAVLDLVVGEYLFH 56
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A + L IL + E E
Sbjct: 57 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAE-----------------E 99
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 100 NNGGKEK----PSILSDALEAIIGAIHLEAG 126
>gi|115437482|ref|NP_001043306.1| Os01g0551100 [Oryza sativa Japonica Group]
gi|75105855|sp|Q5JK90.1|RTL1_ORYSJ RecName: Full=Ribonuclease 3-like protein 1; AltName:
Full=Ribonuclease III-like protein 1; Short=RNase
III-like protein 1
gi|57900069|dbj|BAD88131.1| unknown protein [Oryza sativa Japonica Group]
gi|57900480|dbj|BAD87969.1| unknown protein [Oryza sativa Japonica Group]
gi|113532837|dbj|BAF05220.1| Os01g0551100 [Oryza sativa Japonica Group]
gi|215695480|dbj|BAG90671.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 256
Score = 76.3 bits (186), Expect = 8e-11, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 612 SLLNYSFRDPS--LLVEALTHGSYMLPEI--PRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
+L YSFRD LL +ALTH + E +QRLEFLGDA L Y P
Sbjct: 27 ALGGYSFRDGGALLLEDALTHSVHPRDEAGGRARHQRLEFLGDAALGLAFATIFYRDDPG 86
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH---ASQELYKWINITVDSFERLSLES 724
L GDLT +RSA+V+ A +V+ L+ + A Q+ V F + S+E
Sbjct: 87 LDQGDLTVLRSANVSTQKLARVAVRRRLYPLLRRYNCAPQDH------EVSRFTK-SVEG 139
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
+ + P+ L DI+E++ GA+++DS + EV+ + + L EP+IT + + P
Sbjct: 140 PYSGDP-IEGPRVLADIVEAIVGAVYLDSKLDLEVLQKVAKLLCEPIITKKALLEDPESM 198
Query: 785 LNEYCQKH 792
LNE +H
Sbjct: 199 LNELGGEH 206
>gi|125526376|gb|EAY74490.1| hypothetical protein OsI_02382 [Oryza sativa Indica Group]
Length = 256
Score = 76.3 bits (186), Expect = 8e-11, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 612 SLLNYSFRDPS--LLVEALTHGSYMLPEI--PRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
+L YSFRD LL +ALTH + E +QRLEFLGDA L Y P
Sbjct: 27 ALGGYSFRDGGALLLEDALTHSVHPRDEAGGRARHQRLEFLGDAALGLAFATIFYRDDPG 86
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH---ASQELYKWINITVDSFERLSLES 724
L GDLT +RSA+V+ A +V+ L+ + A Q+ V F + S+E
Sbjct: 87 LDQGDLTVLRSANVSTQKLARVAVRRRLYPLLRRYNCAPQDH------EVSRFTK-SVEG 139
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
+ + P+ L DI+E++ GA+++DS + EV+ + + L EP+IT + + P
Sbjct: 140 LYSGDP-IEGPRVLADIVEAIVGAVYLDSKLDLEVLQKVAKLLCEPIITKKALLEDPESM 198
Query: 785 LNEYCQKH 792
LNE +H
Sbjct: 199 LNELGGEH 206
>gi|260828679|ref|XP_002609290.1| hypothetical protein BRAFLDRAFT_86799 [Branchiostoma floridae]
gi|229294646|gb|EEN65300.1| hypothetical protein BRAFLDRAFT_86799 [Branchiostoma floridae]
Length = 1490
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 128/320 (40%), Gaps = 78/320 (24%)
Query: 451 HLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIR 510
H E LE LGD+ +++ S L+ + + EG L+ + I+ N L L +L F+
Sbjct: 1089 HNERLEFLGDAVVEFLTSSHLYFMFPDLEEGGLATYRTAIVQNQHLAVLAKKLRLDEFM- 1147
Query: 511 TEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTG----RKKVKSKTVADVVEALIGA- 565
+Y G R+ +A+ +EALIGA
Sbjct: 1148 -------------------------------LYAHGPDLCRESDLRHAMANCLEALIGAM 1176
Query: 566 FLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLV 625
++ G E +F + ERL ES F+ LL
Sbjct: 1177 YMQQGLEETKKLFC----------------RLLFSDERLTE---FESRCGMEFKHVRLLA 1217
Query: 626 EALTHGSYMLPEIPRCY-QRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNND 684
A TH + + + QRLEFLGD+V+ + + YLY +P G L+ +RS+ VNN
Sbjct: 1218 RAFTHRTVGFNNLTLGHNQRLEFLGDSVMQMVSSEYLYKHFPDHHEGHLSLLRSSLVNNR 1277
Query: 685 CYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIES 744
AL S G+ ++I+ + + +LSL K L D++E+
Sbjct: 1278 TQALVSQDLGMEEYIISSDKARQG----------KLSLRQ-----------KTLADLMEA 1316
Query: 745 LSGAIFVDSGCNKEVVFESI 764
GA++VD G VF ++
Sbjct: 1317 FMGALYVDQGLEYVCVFMNV 1336
>gi|78186018|ref|YP_374061.1| ribonuclease III [Chlorobium luteolum DSM 273]
gi|90101633|sp|Q3B6L3.1|RNC_PELLD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|78165920|gb|ABB23018.1| RNAse III [Chlorobium luteolum DSM 273]
Length = 276
Score = 75.9 bits (185), Expect = 8e-11, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 36/240 (15%)
Query: 623 LLVEALTHGSYM----LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRS 678
L ALTH S + PEI R QRLEFLGD+VL +I+ YLY ++P + G+L+ R+
Sbjct: 47 LYATALTHRSMVHDTTAPEITRSNQRLEFLGDSVLGLIISEYLYRRFPEGTEGELSSYRA 106
Query: 679 ASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKAL 738
VN A + L H++ I + D +R+ ++ L
Sbjct: 107 KIVNGKSLAGFARNLDLGIHLI---------IGESADQ-QRIRTSTS-----------TL 145
Query: 739 GDIIESLSGAIFVDSGCN--KEVVFESI--RPLLEPMITPETMRLQPARELNEYCQKHHF 794
D E+L+GAI++D G + +E + E I P E M++ E L E+ Q H
Sbjct: 146 ADAFEALTGAIYLDRGLDAVREFIEEQIIDSPAFEAMVSTEN---NHKSRLIEHTQSHQL 202
Query: 795 SMKKTVAPRING---KAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
G + T+EV NG A K+ A+++A++E + +L+ + G
Sbjct: 203 PPPVYTVLSEEGAEHEKTFTIEVSCNGRRLGRGTA-LRKKDAEQLAAEEAMGALERALTG 261
>gi|88608789|ref|YP_506782.1| ribonuclease III [Neorickettsia sennetsu str. Miyayama]
gi|88600958|gb|ABD46426.1| ribonuclease III [Neorickettsia sennetsu str. Miyayama]
Length = 222
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITVYLY 662
+ + L+SLL F++ LLVEALTH P + +C Y+RLEFLGDAVL+ +I LY
Sbjct: 1 MELEELQSLLGVYFKNKDLLVEALTH-----PSVEKCPSYERLEFLGDAVLNLVIASMLY 55
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+ +P G L+ +SA + + A+ + + L +I +S
Sbjct: 56 DLFPGDPEGRLSHRQSALICKNTLAMLARQMNLGDYIRLSSS------------------ 97
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPA 782
E G +TS L +++E+L GAIF+D+G F R + +++ P
Sbjct: 98 EEAGGGRDKTS---NLENVLEALVGAIFLDAGLETVTCFIKKR-WYGLAVQSDSIEPNPK 153
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKAAV-----TVEVHANGTLFKHTHADADKETAKKVA 837
L E Q MK + IN +E+ +G K K+ ++ A
Sbjct: 154 STLQELLQAK--GMKPPIYNVINRSGPAHLPIFEIEIRVDGK--KRRATGKSKKLGEENA 209
Query: 838 SKEVLKSLKA 847
++ +L+ LKA
Sbjct: 210 ARMMLEELKA 219
>gi|228940937|ref|ZP_04103496.1| Ribonuclease 3 [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228966797|ref|ZP_04127841.1| Ribonuclease 3 [Bacillus thuringiensis serovar sotto str. T04001]
gi|365159374|ref|ZP_09355555.1| ribonuclease 3 [Bacillus sp. 7_6_55CFAA_CT2]
gi|228792896|gb|EEM40454.1| Ribonuclease 3 [Bacillus thuringiensis serovar sotto str. T04001]
gi|228818773|gb|EEM64839.1| Ribonuclease 3 [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|363625372|gb|EHL76413.1| ribonuclease 3 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 225
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 36/167 (21%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ +F D LL++A TH SY+ + ++ RLEFLGDAVL+ ++ YL+ KYPT+S
Sbjct: 6 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSE 65
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-----EST 725
G+LT +R+A V C ++ + EL SF L L E T
Sbjct: 66 GELTKLRAAIV---C----------EPSLVRFANEL---------SFGSLVLLGKGEEMT 103
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
G E P L D+ E+ GA+++D G E V+E ++ ++ P I
Sbjct: 104 GGRER----PALLADVFEAFIGALYLDQGL--ETVWEFLKEIVYPKI 144
>gi|163119429|ref|YP_078987.2| ribonuclease III [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319646025|ref|ZP_08000255.1| ribonuclease 3 [Bacillus sp. BT1B_CT2]
gi|404489084|ref|YP_006713190.1| ribonuclease III [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|81385589|sp|Q65JQ5.1|RNC_BACLD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|52348075|gb|AAU40709.1| ribonuclease III [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|145902936|gb|AAU23349.2| ribonuclease III [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317391775|gb|EFV72572.1| ribonuclease 3 [Bacillus sp. BT1B_CT2]
Length = 249
Score = 75.9 bits (185), Expect = 8e-11, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 37/176 (21%)
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGD 650
++ FQ +AE+ + + ++ F++ LL +A TH SY+ + Y+ RLEFLGD
Sbjct: 10 KKMFQKKAEQF---KKFQERISVQFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGD 66
Query: 651 AVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWI 710
AVL+ I+ +LY KYP +S GDLT +R+A V +L S+ H L
Sbjct: 67 AVLELTISQFLYAKYPAMSEGDLTKLRAAIVCEP--SLVSLAHEL--------------- 109
Query: 711 NITVDSFERLSL-----ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
SF L L E T G + P L D+ E+ GA+++D G V F
Sbjct: 110 -----SFGELVLLGKGEEMTGGRKR----PALLADVFEAFIGALYLDQGLEAVVTF 156
>gi|419694651|ref|ZP_14222609.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380670012|gb|EIB85278.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 224
Score = 75.9 bits (185), Expect = 8e-11, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGNFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|379055827|emb|CCD32417.1| dicer-1, partial [Aphis gossypii]
Length = 319
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 64/257 (24%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ T+ N HEG LS + + +SN
Sbjct: 65 SVILQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSNL 124
Query: 495 ALCKLG--------------------------CDHKLPGFIRTEPFDPKMWMI------- 521
L +LG HKL + +W +
Sbjct: 125 NLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTSLWNMITLPTFK 184
Query: 522 -PGDNS------------GSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLS 568
P D + +L LF + + + K++AD VEALIGA+L
Sbjct: 185 DPTDKEIEEVIQQFKVGFSNEDLESTPLFVPYNLVT--QHSIPDKSIADCVEALIGAYLI 242
Query: 569 TGGENVGLIFLDRIGIKV----DFVNVPYERQFQVQAERLVN------------VRHLES 612
+ G L+F+ +GIKV D + Y + R V+ E
Sbjct: 243 SCGARGALLFMSWLGIKVLPSLDCSKLGYLKPPSSPLLRNVHNPEGELTKLMDGFESFEQ 302
Query: 613 LLNYSFRDPSLLVEALT 629
L Y F+D S L++A+T
Sbjct: 303 HLGYHFQDRSYLLQAMT 319
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L N+ PS++++ALT + +RLE +GD+ L Y IT YLY + + G
Sbjct: 56 LDNHPGPSPSVILQALTMSN---ANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGK 112
Query: 673 LTDMRSASVNN-DCYALSSVK-------------------------HGLHKHILHASQEL 706
L+ +RS V+N + Y L +K H L K +++AS
Sbjct: 113 LSHLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPT 172
Query: 707 YKWINITVDSFERLS-------------------LEST-----FGWESETSFP-KALGDI 741
W IT+ +F+ + LEST + ++ S P K++ D
Sbjct: 173 SLWNMITLPTFKDPTDKEIEEVIQQFKVGFSNEDLESTPLFVPYNLVTQHSIPDKSIADC 232
Query: 742 IESLSGAIFVDSGCNKEVVFES 763
+E+L GA + G ++F S
Sbjct: 233 VEALIGAYLISCGARGALLFMS 254
>gi|339448388|ref|ZP_08651944.1| ribonuclease III [Lactobacillus fructivorans KCTC 3543]
Length = 235
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 45/244 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKY 665
LE N F D SLL EA+T SY + E P + Y+RLEFLGDAV +++ Y++ ++
Sbjct: 9 LEDKFNIKFNDESLLDEAMTQASY-VNEHPGQGLKFYERLEFLGDAVYQLVVSDYIFRRF 67
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L G LT +R+A VN ++ + + K+I E ++ +R SL
Sbjct: 68 PELPQGRLTRLRAAMVNEHSFSRFARECHFDKYIRLGKGEE------KANARQRDSL--- 118
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMR------L 779
L DI ES GA+++D G +++ E +I P+
Sbjct: 119 ------------LCDIFESFIGAVYLDQGMA------TVKHFCEIVIFPKLDEGWFDEFF 160
Query: 780 QPARELNEYCQKH-----HFSMKKTVAPRINGKAAVTVEVHAN--GTLFKHTHADADKET 832
EL E Q+ + + P + K V V+++ G H+ DA+++
Sbjct: 161 DHKTELQEVVQEDGPVDLDYELVSEDGPDNDRKFKVAVKINGKEMGVGLGHSKKDAEQKA 220
Query: 833 AKKV 836
AKK
Sbjct: 221 AKKA 224
>gi|303248688|ref|ZP_07334942.1| ribonuclease III [Desulfovibrio fructosovorans JJ]
gi|302489944|gb|EFL49870.1| ribonuclease III [Desulfovibrio fructosovorans JJ]
Length = 233
Score = 75.9 bits (185), Expect = 8e-11, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 40/248 (16%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPT 667
LE+ L + F P LL ALTH SY E + +RLEFLGDAVL+ ++ L+ ++P
Sbjct: 7 LENALGHVFVRPELLTTALTHSSYANERGEAAKHNERLEFLGDAVLELSVSEELFARFPE 66
Query: 668 LSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG 727
G+LT +RS VN A +++ L HIL E E+ G
Sbjct: 67 APEGELTLLRSQLVNESSLAAMALRLSLEDHILLGKGE-----------------ENQGG 109
Query: 728 WESETSFPKALGDIIESLSGAIFVDS--GCNKEVV---FESIRPLLEPMITPETMRLQPA 782
+ P L D+ E++ GA+F+D G K V F + P+ + P+T +
Sbjct: 110 ----RTRPSLLSDVFEAVIGALFLDGGYGVAKSFVNATFAEVWPVRS--VAPKTRDYK-- 161
Query: 783 RELNEYCQKHH-----FSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
L EY QK H +++ + P + + V +E+ L T + + A+++A
Sbjct: 162 SRLQEYTQKVHKARPVYTLLDSEGPEHDKRFTVRLELPDGHAL---TAMEKSVKKAEQMA 218
Query: 838 SKEVLKSL 845
++ L+ +
Sbjct: 219 ARLALEKI 226
>gi|149200057|ref|ZP_01877082.1| ribonuclease III [Lentisphaera araneosa HTCC2155]
gi|149136815|gb|EDM25243.1| ribonuclease III [Lentisphaera araneosa HTCC2155]
Length = 232
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYML--PEIPRCYQRLEFLGDAVLDYLITVYLY 662
++ + LE L F P+LL EALTH SY E QRLEFLGDAV++ +++ YL+
Sbjct: 3 ISFKVLEDNLKCKFNQPTLLREALTHRSYKFESKEPLNDNQRLEFLGDAVIELIVSRYLF 62
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
++YP GDLT R+A V + L K++L EL N ER
Sbjct: 63 DRYPDAPEGDLTKYRAALVKESALFECAKSIKLGKYLLLGKSELKSQGN------ER--- 113
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--Q 780
P L D E+L AI++D G F I L + P + L
Sbjct: 114 ------------PSNLSDAYEALMAAIYLDQGYETAQSFH-INILEKLWDEPADLLLVQN 160
Query: 781 PARELNEYCQKHHFSMKKTV 800
P L E QK+H S K +
Sbjct: 161 PKGTLQELTQKNHGSPPKYI 180
>gi|375337647|ref|ZP_09778991.1| ribonuclease III [Succinivibrionaceae bacterium WG-1]
Length = 237
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 106/244 (43%), Gaps = 34/244 (13%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE L Y + D L +ALTH SY +RLEFLGD++L L+ +LY+++P +
Sbjct: 12 LEKALGYEYNDLQHLQKALTHRSYGASH----NERLEFLGDSILGMLMAEHLYHQFPEVP 67
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
GDLT MRS V A + L ++L EL + G+
Sbjct: 68 EGDLTRMRSTLVREPTLAEIARDLKLSDYLLMGPGEL-----------------KSGGYR 110
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM---ITPETMRLQPARELN 786
++ L D +E++ G+I++DS N E+V + L + I P + P L
Sbjct: 111 RDS----ILADAVEAILGSIYLDSNNNIEIVRTVLMSLFDTRLKEIHPGFEQKDPKTNLQ 166
Query: 787 EYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EY Q H + +I G++ TV++ A+ F T +K LK
Sbjct: 167 EYLQARHAPLPVYTVTKITGESHNQQFTVKLEAS---FNRDPFIGYGTTRRKAEQNAALK 223
Query: 844 SLKA 847
+L A
Sbjct: 224 ALDA 227
>gi|312869965|ref|ZP_07730104.1| ribonuclease III [Lactobacillus oris PB013-T2-3]
gi|417886270|ref|ZP_12530417.1| ribonuclease III [Lactobacillus oris F0423]
gi|311094550|gb|EFQ52855.1| ribonuclease III [Lactobacillus oris PB013-T2-3]
gi|341593768|gb|EGS36593.1| ribonuclease III [Lactobacillus oris F0423]
Length = 232
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 111/250 (44%), Gaps = 38/250 (15%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNK 664
+L + F DP LL EA T SY + E P + Y+R+EFLGDAVL+ +++ Y+Y +
Sbjct: 8 YLAKEFDIHFSDPRLLAEAFTQASY-VNEHPHQNLKFYERIEFLGDAVLELIVSEYIYKR 66
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
YP L G LT +R+A V D ++ K H D + RL
Sbjct: 67 YPELPQGKLTRLRAAMVCEDSFS----KFAKECHF---------------DQYIRLGHGE 107
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETM--RLQPA 782
+ P L DI ES GA+++D G + V + +R ++ P + +
Sbjct: 108 ELAGARQR--PGLLCDIFESFVGALYLDQG--RPAVEKFVRRVIFPKLDMGWFDHAVDAK 163
Query: 783 RELNEYCQKH-----HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
L E+ Q+ + + + N A V+V ANG + + K+ A+ A
Sbjct: 164 TSLQEFLQRDGDVLIEYHLLEESGTENN--PAFHVDVAANGQVIADGQGSSKKQ-AEMQA 220
Query: 838 SKEVLKSLKA 847
++ LK L+A
Sbjct: 221 AQRALKKLRA 230
>gi|422023321|ref|ZP_16369826.1| ribonuclease III [Providencia sneebia DSM 19967]
gi|414094089|gb|EKT55759.1| ribonuclease III [Providencia sneebia DSM 19967]
Length = 226
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y F LL++ALTH S + +RLEFLGD++L ++I LY ++P
Sbjct: 6 IEQLQRKLGYKFNQHELLIQALTHRSAS----SKHNERLEFLGDSILSFVIANDLYRRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 KVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G IF+DS N ++++ + + L I+P + P
Sbjct: 112 -----------LADTVEALIGGIFLDSDINMIEKIILDWYQTRLNE-ISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q H + V + G+A
Sbjct: 160 LQEYLQGRHLPLPNYVVVLVKGEA 183
>gi|47210542|emb|CAF93934.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1479
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1352 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1411
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1412 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1439
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1348 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1400
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1401 MRSKKVSN 1408
>gi|419622547|ref|ZP_14155777.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23216]
gi|380599261|gb|EIB19635.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 224
Score = 75.9 bits (185), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|157415855|ref|YP_001483111.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
gi|283957021|ref|ZP_06374493.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
gi|384442208|ref|YP_005658511.1| ribonuclease 3 [Campylobacter jejuni subsp. jejuni M1]
gi|415746574|ref|ZP_11475582.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 327]
gi|419641678|ref|ZP_14173557.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23357]
gi|419643328|ref|ZP_14175076.1| ribonuclease III [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|419697815|ref|ZP_14225542.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23211]
gi|189043300|sp|A8FNU7.1|RNC_CAMJ8 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|157386819|gb|ABV53134.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
gi|283791522|gb|EFC30319.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
gi|307748491|gb|ADN91761.1| Ribonuclease 3 [Campylobacter jejuni subsp. jejuni M1]
gi|315931680|gb|EFV10641.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 327]
gi|380616054|gb|EIB35273.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23357]
gi|380622316|gb|EIB41076.1| ribonuclease III [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|380676845|gb|EIB91721.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23211]
Length = 224
Score = 75.9 bits (185), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|239624036|ref|ZP_04667067.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522067|gb|EEQ61933.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 235
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLP---EIPRCYQRLEFLGDAVLDYLITVYLY 662
+++ LE ++Y F+D SL +ALTH SY + RC +RLEFLGDAVL+ + + +LY
Sbjct: 4 HLKELEERIDYQFKDQSLFSQALTHSSYANEHRLDHSRCNERLEFLGDAVLEIVTSDFLY 63
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+KY TL GDLT +R++ V A + L +++ E
Sbjct: 64 HKYATLPEGDLTKIRASIVCEPTLAYCAGDIRLGEYLFLGKGE----------------- 106
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
++T G + + D +E+L GAI++D G
Sbjct: 107 DATGGRGRNS----VVSDAMEALIGAIYLDGG 134
>gi|451812308|ref|YP_007448762.1| ribonuclease III [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778210|gb|AGF49158.1| ribonuclease III [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 240
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE L Y FR+ +LL ALTH S P +RLEFLGD+VL++ IT++L+ KY +
Sbjct: 5 ELERSLGYKFRNSNLLELALTHRSNGSPH----NERLEFLGDSVLNFAITIFLFEKYSDV 60
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
G L+ +R++ V + A + + L +++ EL
Sbjct: 61 DEGGLSRLRASLVQQNSLATIASELNLSRYLKLGEGEL---------------------K 99
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQPARELNE 787
+ P L D +E++ GAIF DS N+ ++V E L + +TM L E
Sbjct: 100 SGGCNRPSILADCLEAIFGAIFKDSSFNEVKIVIEKQFVKLLNNLDLKTMCKDAKSLLQE 159
Query: 788 YCQKHHFSMKKTVAPRINGKA 808
Q S+ + + ING A
Sbjct: 160 LLQSRKISLPRYLIVNINGAA 180
>gi|387892267|ref|YP_006322564.1| ribonuclease III [Pseudomonas fluorescens A506]
gi|423690145|ref|ZP_17664665.1| ribonuclease III [Pseudomonas fluorescens SS101]
gi|447915453|ref|YP_007396021.1| ribonuclease III [Pseudomonas poae RE*1-1-14]
gi|387161990|gb|AFJ57189.1| ribonuclease III [Pseudomonas fluorescens A506]
gi|388001192|gb|EIK62521.1| ribonuclease III [Pseudomonas fluorescens SS101]
gi|445199316|gb|AGE24525.1| ribonuclease III [Pseudomonas poae RE*1-1-14]
Length = 229
Score = 75.9 bits (185), Expect = 1e-10, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
V++ LE L Y+F+D L+V ALTH S+ R +RLEFLGDA+L++ L+ +
Sbjct: 3 VSLSRLERQLGYTFKDQELMVLALTHRSFA----GRNNERLEFLGDAILNFAAGEALFER 58
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P G L+ +R+ V + A+ + GL +++ S EL F R S+
Sbjct: 59 FPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKS------GGFRRESI-- 110
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L GAI++D+G KE V + +E + +T + P
Sbjct: 111 -------------LADALEALIGAIYLDAGMETAKERVVAWLASEIESLTLVDTNK-DPK 156
Query: 783 RELNEYCQKHHFSMKKTVAPRINGK 807
L EY Q + + I G+
Sbjct: 157 TRLQEYLQSRGCELPRYEVVDIQGE 181
Score = 40.8 bits (94), Expect = 3.1, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 443 TKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCD 502
T + G + E LE LGD+ L +AA + LF+ + EG LS + R++ L L
Sbjct: 27 THRSFAGRNNERLEFLGDAILNFAAGEALFERFPQAREGQLSRLRARLVKGETLAVLARG 86
Query: 503 HKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEAL 562
L ++R GS EL E +AD +EAL
Sbjct: 87 FGLGEYLRL---------------GSGELKSGGFRRE-------------SILADALEAL 118
Query: 563 IGA-FLSTGGE 572
IGA +L G E
Sbjct: 119 IGAIYLDAGME 129
>gi|254993548|ref|ZP_05275738.1| ribonuclease III [Listeria monocytogenes FSL J2-064]
Length = 206
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ + + F+D LL +A TH SY+ E + +RLEFLGDAVL+ ++ YL+NKYP
Sbjct: 7 LQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSNYLFNKYP 66
Query: 667 TLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
++ G +T MR+A V C +L +H K++ + E
Sbjct: 67 DMAEGHMTKMRAAIV---CEPSLVEFAEAVH---------FSKYVRLG-------KGEEK 107
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G + P L D+ ES GA+++D+G +K V F LE +I P+
Sbjct: 108 AGGRTR---PALLADVFESFIGALYLDNGIDKVVTF------LERVIFPK 148
>gi|220931875|ref|YP_002508783.1| Ribonuclease III [Halothermothrix orenii H 168]
gi|219993185|gb|ACL69788.1| Ribonuclease III [Halothermothrix orenii H 168]
Length = 236
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 615 NYSFRDPSLLVEALTHGSYML----PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
N F D SLL +A+TH S++ P++ +RLEFLGD+VL +I+ YLY +P +
Sbjct: 18 NIRFNDISLLQKAVTHKSFVHEKSDPDLEDN-ERLEFLGDSVLSIVISTYLYKNFPEYNE 76
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWES 730
G+L MR+ V++ A + + GL K+IL E E G E
Sbjct: 77 GELAKMRAYIVSSSHLACKARELGLGKYILMGKGE-----------------ELNGGRER 119
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR------- 783
E+ L D +E++ GAI++D G F +I LL + +L
Sbjct: 120 ES----ILADTLEAVIGAIYLDQG------FNTITDLLINFFKDDVKKLDQGNIIRDYKT 169
Query: 784 ELNEYCQKH-----HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
L E+ QK +++ P N K V V+V NG + KE +K A+
Sbjct: 170 YLQEFIQKDGSCEIKYNIINEYGPDHNKKFEVGVKV--NGKELGRGTGFSKKEAEQK-AA 226
Query: 839 KEVLKSL 845
K+ L +L
Sbjct: 227 KDALSNL 233
>gi|225419776|ref|ZP_03762079.1| hypothetical protein CLOSTASPAR_06114 [Clostridium asparagiforme
DSM 15981]
gi|225041580|gb|EEG51826.1| hypothetical protein CLOSTASPAR_06114 [Clostridium asparagiforme
DSM 15981]
Length = 232
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 24/152 (15%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI---PRCYQRLEFLGDAVLDYLITVYLY 662
N++ LE + Y F++ L V+ALTH SY RC +RLEFLGDAVL+ + + +LY
Sbjct: 4 NLQELERTICYQFKEHGLFVQALTHSSYANEHRWNHSRCNERLEFLGDAVLEIVTSDFLY 63
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+KY L GDLT +R++ V A + L +++L E
Sbjct: 64 HKYEDLPEGDLTKIRASIVCEPTLAYCAGDISLGEYLLLGKGE----------------- 106
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSG 754
E+T G S + D +E+L GAI++D G
Sbjct: 107 EATGG----RSRNSVVSDAMEALIGAIYLDGG 134
>gi|57238646|ref|YP_179777.1| ribonuclease III [Campylobacter jejuni RM1221]
gi|384443998|ref|YP_005660250.1| Ribonuclease III [Campylobacter jejuni subsp. jejuni S3]
gi|81353160|sp|Q5HSF8.1|RNC_CAMJR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|57167450|gb|AAW36229.1| ribonuclease III [Campylobacter jejuni RM1221]
gi|315059085|gb|ADT73414.1| Ribonuclease III [Campylobacter jejuni subsp. jejuni S3]
Length = 224
Score = 75.9 bits (185), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLERSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGREK----PSILSDALEAIIGAIHLEAG 127
>gi|121613213|ref|YP_001001278.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
gi|121504230|gb|EAQ72743.2| ribonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
Length = 225
Score = 75.9 bits (185), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 4 NIEKLERSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 58
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 59 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 101
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 102 NNGGKEK----PSILSDALEAIIGAIHLEAG 128
>gi|75762036|ref|ZP_00741948.1| Ribonuclease III [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74490482|gb|EAO53786.1| Ribonuclease III [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 262
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 36/167 (21%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ +F D LL++A TH SY+ + ++ RLEFLGDAVL+ ++ YL+ KYPT+S
Sbjct: 43 IGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSE 102
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL-----EST 725
G+LT +R+A V C ++ + EL SF L L E T
Sbjct: 103 GELTKLRAAIV---C----------EPSLVRFANEL---------SFGSLVLLGKGEEMT 140
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
G E P L D+ E+ GA+++D G E V+E ++ ++ P I
Sbjct: 141 GGRER----PALLADVFEAFIGALYLDQGL--ETVWEFLKEIVYPKI 181
>gi|337750088|ref|YP_004644250.1| hypothetical protein KNP414_05856 [Paenibacillus mucilaginosus
KNP414]
gi|379722931|ref|YP_005315062.1| hypothetical protein PM3016_5198 [Paenibacillus mucilaginosus 3016]
gi|386725711|ref|YP_006192037.1| hypothetical protein B2K_26880 [Paenibacillus mucilaginosus K02]
gi|336301277|gb|AEI44380.1| Rnc [Paenibacillus mucilaginosus KNP414]
gi|378571603|gb|AFC31913.1| Rnc [Paenibacillus mucilaginosus 3016]
gi|384092836|gb|AFH64272.1| hypothetical protein B2K_26880 [Paenibacillus mucilaginosus K02]
Length = 234
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 36/196 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLY 662
N++ L+S LN +F +P LL +A TH SY+ Y +RLEFLGDAVL+ ++ YL+
Sbjct: 4 NLKLLQSELNITFSNPDLLRQAFTHSSYVNEHRIGQYKDNERLEFLGDAVLELTVSEYLF 63
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+KYP S G+LT +R++ V ++ +++L + + E L+
Sbjct: 64 DKYPDRSEGELTKLRASIVCEPS-------------LVGFAEQLEFGSYVLLGKGEELTG 110
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI---TPETMRL 779
T P L D+ ES GA+++D G E +R L+ + P+ RL
Sbjct: 111 GRT--------RPALLADVFESFIGALYLDQGL------ERVRTFLQQYMFPHLPQQGRL 156
Query: 780 QPA---RELNEYCQKH 792
A L E+ Q+H
Sbjct: 157 LTADYKTHLQEHTQQH 172
>gi|86152963|ref|ZP_01071168.1| ribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13]
gi|167006173|ref|ZP_02271931.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
gi|419617831|ref|ZP_14151397.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 129-258]
gi|419654145|ref|ZP_14185094.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-872]
gi|419665962|ref|ZP_14196014.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-7]
gi|419668873|ref|ZP_14198676.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-11]
gi|419687215|ref|ZP_14215623.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1798]
gi|419691430|ref|ZP_14219550.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1928]
gi|85843848|gb|EAQ61058.1| ribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13]
gi|380596428|gb|EIB17120.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 129-258]
gi|380631711|gb|EIB49874.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-872]
gi|380642199|gb|EIB59482.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380648273|gb|EIB65135.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-11]
gi|380662839|gb|EIB78523.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1798]
gi|380672387|gb|EIB87559.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1928]
Length = 224
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLERSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|424846628|ref|ZP_18271222.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NW]
gi|356485926|gb|EHI15913.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NW]
Length = 224
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|424782431|ref|ZP_18209278.1| Ribonuclease III [Campylobacter showae CSUNSWCD]
gi|421959751|gb|EKU11359.1| Ribonuclease III [Campylobacter showae CSUNSWCD]
Length = 222
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 30/159 (18%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+R+LE L Y F+D LL ALTH S + +RLEFLGDAV+D +I YL++K+
Sbjct: 1 MRNLEEKLGYKFKDEKLLKTALTHKSV---KGGANNERLEFLGDAVMDLVIGDYLFHKFS 57
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
LS GDL+ +R+A VN +A L K++ L + INI+ E
Sbjct: 58 RLSEGDLSKLRAALVNEKSFA------ELAKYL-----NLGQLINIS-------PAEEHN 99
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIR 765
G ++ S L D E+L GAI+++SG F+++R
Sbjct: 100 GGRAKASI---LSDAFEALMGAIYLESG------FDAVR 129
>gi|255321781|ref|ZP_05362936.1| ribonuclease III [Campylobacter showae RM3277]
gi|255301261|gb|EET80523.1| ribonuclease III [Campylobacter showae RM3277]
Length = 222
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 30/159 (18%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+R+LE L Y F+D LL ALTH S + +RLEFLGDAV+D +I YL++K+
Sbjct: 1 MRNLEEKLGYKFKDEKLLKTALTHKSV---KGGANNERLEFLGDAVMDLVIGDYLFHKFS 57
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
LS GDL+ +R+A VN +A L K++ L + INI+ E
Sbjct: 58 RLSEGDLSKLRAALVNEKSFA------ELAKYL-----NLGQLINIS-------PAEEHN 99
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIR 765
G ++ S L D E+L GAI+++SG F+++R
Sbjct: 100 GGRAKASI---LSDAFEALMGAIYLESG------FDAVR 129
>gi|384045183|ref|YP_005493200.1| Ribonuclease III [Bacillus megaterium WSH-002]
gi|345442874|gb|AEN87891.1| Ribonuclease III [Bacillus megaterium WSH-002]
Length = 248
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 602 ERLVNVRHLESLLNYS------FRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAV 652
+R +NV+ ++ + F + +LL +A TH SY+ R Y+ RLEFLGDAV
Sbjct: 9 DRKINVKFKQNFAEFQKEIGIQFTNEALLFQAFTHSSYVNEHRRRPYEDNERLEFLGDAV 68
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI 712
L+ ++ +L+ KYPT+S G+LT +R+A V + + K +L E
Sbjct: 69 LELTVSQFLFKKYPTMSEGELTKLRAAVVCEPSLVTFANEMDFGKLVLLGKGE------- 121
Query: 713 TVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN------KEVVFESI 764
E T G S P L D+ E+ GA+++D G + K+VVF I
Sbjct: 122 ----------EMTGGR----SRPALLADVFEAFIGALYLDQGLDTVVTILKKVVFPKI 165
>gi|395242485|ref|ZP_10419482.1| Ribonuclease III [Lactobacillus pasteurii CRBIP 24.76]
gi|394480217|emb|CCI85722.1| Ribonuclease III [Lactobacillus pasteurii CRBIP 24.76]
Length = 227
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 25/152 (16%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ L+ F LL EA TH SY PE R Y++LEFLGDAVL+ I+ YLY
Sbjct: 7 IEQLDEKYGIKFHKIELLEEAFTHSSYANEHPEGSRDYEKLEFLGDAVLELAISDYLYRH 66
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHI-LHASQELYKWINITVDSFERLSLE 723
YP L+ G+LT MRS V + ++ +++ G I L +E S R +L
Sbjct: 67 YPKLNEGELTRMRSNIVRTEGFSEFAIECGFQDQINLGKGEE-------KAGSRNRKTL- 118
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGC 755
L D+ E+ +GA+F+D G
Sbjct: 119 --------------LEDVFEAFNGALFLDQGL 136
>gi|37527216|ref|NP_930560.1| ribonuclease III [Photorhabdus luminescens subsp. laumondii TTO1]
gi|81418780|sp|Q7N1X5.1|RNC_PHOLL RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|36786650|emb|CAE15714.1| ribonuclease III (RNase III) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 226
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+F LL++ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 4 IVINRLQRKLGYTFDQYDLLIQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHR 59
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL
Sbjct: 60 FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGEL-----------------K 102
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQPAR 783
+ G+ E+ L D +E+L GAIF+DS E + S I+P + P
Sbjct: 103 SGGYRRES----ILADTVEALIGAIFLDSDIQSIERIILSWYETRLNEISPGDKQKDPKT 158
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q HH + + + G+A
Sbjct: 159 RLQEYLQGHHLPLPSYLVVMVRGEA 183
>gi|300717987|ref|YP_003742790.1| ribonuclease III [Erwinia billingiae Eb661]
gi|299063823|emb|CAX60943.1| Ribonuclease III [Erwinia billingiae Eb661]
Length = 226
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+F LL +ALTH S + +RLEFLGD++L Y+I LY +
Sbjct: 4 IVITRLQRKLGYTFTHQELLQQALTHRSAS----SKHNERLEFLGDSILSYVIANALYQR 59
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL
Sbjct: 60 FPRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGEL-----------------K 102
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
+ G+ E+ L D +E+L G +F+DS ++++ E LE I+P + P
Sbjct: 103 SGGYRRES----ILADTVEALIGGVFLDSDIQNVEKLILEWYASRLE-QISPGDKQKDPK 157
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q H + + ++ G+A
Sbjct: 158 TRLQEYLQGRHLPLPSYLVVQVRGEA 183
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 30/167 (17%)
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
T ++L+ T + H E LE LGDS L Y + L++ + EG +S + +
Sbjct: 16 TFTHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYQRFPRVDEGDMSRMRATL 75
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ L ++ + L +R P + K SG Y
Sbjct: 76 VRGNTLAEMAREFDLGECLRLGPGELK--------SGGYR-------------------- 107
Query: 551 KSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 596
+ +AD VEALIG FL + +NV + L+ +++ ++ P ++Q
Sbjct: 108 RESILADTVEALIGGVFLDSDIQNVEKLILEWYASRLEQIS-PGDKQ 153
>gi|294500965|ref|YP_003564665.1| ribonuclease III [Bacillus megaterium QM B1551]
gi|294350902|gb|ADE71231.1| ribonuclease III [Bacillus megaterium QM B1551]
Length = 248
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 30/168 (17%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLDYLITVYLY 662
N + + F + +LL +A TH SY+ R Y+ RLEFLGDAVL+ ++ +L+
Sbjct: 19 NFAEFQKEIGIQFTNEALLFQAFTHSSYVNEHRRRPYEDNERLEFLGDAVLELTVSQFLF 78
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
KYPT+S G+LT +R+A V + + K +L E
Sbjct: 79 KKYPTMSEGELTKLRAAVVCEPSLVTFANEMDFGKLVLLGKGE----------------- 121
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN------KEVVFESI 764
E T G S P L D+ E+ GA+++D G + K+VVF I
Sbjct: 122 EMTGGR----SRPALLADVFEAFIGALYLDQGLDTVVTILKKVVFPKI 165
>gi|438000104|ref|YP_007183837.1| ribonuclease III [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451813034|ref|YP_007449487.1| ribonuclease III [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429339338|gb|AFZ83760.1| ribonuclease III [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451779003|gb|AGF49883.1| ribonuclease III [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 236
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE LNY F + +LL ALTH SY P +RLEFLGD+VL++ IT++L+ KY +
Sbjct: 5 ELEYSLNYKFSNNNLLELALTHRSYGSPH----NERLEFLGDSVLNFAITIFLFEKYSDI 60
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
G L+ +R+ V + A + L +++ EL
Sbjct: 61 DEGGLSRLRARLVQQNSLATIASDLNLSRYLKLGDGEL---------------------K 99
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQPARELNE 787
+ P L D +E++ GA+F DS N+ +V E L + +TM L E
Sbjct: 100 SGGCNRPSILADCLEAVFGAVFKDSSFNEARIVIEKQFVKLLNNLDLKTMCKDAKSLLQE 159
Query: 788 YCQKHHFSMKKTVAPRINGKA 808
Q S+ + + ING A
Sbjct: 160 LLQSRKISLPRYLIVNINGAA 180
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 429 NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKD 488
N + +LE T + H E LE LGDS L +A + LF+ Y + EG LS +
Sbjct: 11 NYKFSNNNLLELALTHRSYGSPHNERLEFLGDSVLNFAITIFLFEKYSDIDEGGLSRLRA 70
Query: 489 RIISNAALCKLGCDHKLPGFIR 510
R++ +L + D L +++
Sbjct: 71 RLVQQNSLATIASDLNLSRYLK 92
>gi|397661499|ref|YP_006502199.1| ribonuclease 3 [Taylorella equigenitalis ATCC 35865]
gi|394349678|gb|AFN35592.1| ribonuclease 3 [Taylorella equigenitalis ATCC 35865]
Length = 222
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 105/242 (43%), Gaps = 29/242 (11%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L+ LNYSF+D LL ALTH S+ +RLEFLGD++L++ + L+ K
Sbjct: 5 ELQKKLNYSFKDIKLLNRALTHRSFS----STHNERLEFLGDSILNFSVASLLFKKLKDQ 60
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ GDLT +R++ VN D A + L I EL F+R
Sbjct: 61 AEGDLTRIRASYVNQDTLAKIANNLKLQDLIKLGEGELKSG------GFKR--------- 105
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQPARELNE 787
P L D +E++ GAI++DS + + V ESI L + T+ L E
Sbjct: 106 ------PSILADAVEAIFGAIYIDSNIEQAQKVVESIYEPLMKNVDFSTVGRDSKTLLQE 159
Query: 788 YCQKHHFSMKKTVAPRINGKA-AVTVEVHANGTLFKHT--HADADKETAKKVASKEVLKS 844
+ Q + I G A EV LF + A + +A++ A+ VL+
Sbjct: 160 FVQAKRVPLPSYKVLNITGAAHDQEFEVECTVELFDVSAQAVGASRRSAEQAAATLVLEK 219
Query: 845 LK 846
LK
Sbjct: 220 LK 221
>gi|295706311|ref|YP_003599386.1| ribonuclease III [Bacillus megaterium DSM 319]
gi|294803970|gb|ADF41036.1| ribonuclease III [Bacillus megaterium DSM 319]
Length = 265
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 30/168 (17%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGDAVLDYLITVYLY 662
N + + F + +LL +A TH SY+ R Y+ RLEFLGDAVL+ ++ +L+
Sbjct: 36 NFAEFQKEIGIQFTNEALLFQAFTHSSYVNEHRRRPYEDNERLEFLGDAVLELTVSQFLF 95
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
KYPT+S G+LT +R+A V + + K +L E
Sbjct: 96 KKYPTMSEGELTKLRAAVVCEPSLVTFANEMDFGKLVLLGKGE----------------- 138
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN------KEVVFESI 764
E T G S P L D+ E+ GA+++D G + K+VVF I
Sbjct: 139 EMTGGR----SRPALLADVFEAFIGALYLDQGLDTVVTILKKVVFPKI 182
>gi|153951733|ref|YP_001398912.1| ribonuclease III [Campylobacter jejuni subsp. doylei 269.97]
gi|189043301|sp|A7H5Y2.1|RNC_CAMJD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|152939179|gb|ABS43920.1| ribonuclease III [Campylobacter jejuni subsp. doylei 269.97]
Length = 225
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLIHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFTKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|328769566|gb|EGF79610.1| hypothetical protein BATDEDRAFT_26082 [Batrachochytrium
dendrobatidis JAM81]
Length = 334
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
+QRLEFLGDAVL YL +LY P L+PG L+ +R+ V N A S++ GL K+I H
Sbjct: 15 FQRLEFLGDAVLSYLAMQHLYKITPPLNPGGLSKLRAELVCNQFLACVSIQIGLVKYIRH 74
Query: 702 -------ASQELYKWINITVDSFERLSL----------ESTFGWESETSFPKALGDIIES 744
A W+ + S SL + W + PK GD+ ES
Sbjct: 75 TDMTMEAAIGRFTAWVQGYLASESSTSLPISTSATQIASARLFWNKGNTAPKTAGDVYES 134
Query: 745 LSGAIFVDS 753
+ GA+FVDS
Sbjct: 135 MLGAVFVDS 143
>gi|451936545|ref|YP_007460399.1| ribonuclease III [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777468|gb|AGF48443.1| ribonuclease III [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 241
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE L+Y F + +LL ALTH S P +RLEFLGD+VL++ IT++L+ KY +
Sbjct: 5 ELERSLDYKFSNINLLELALTHRSNGSPH----NERLEFLGDSVLNFAITIFLFEKYADI 60
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
G L+ +R++ V + A+ + L K++ EL
Sbjct: 61 DEGGLSRLRASLVQQNSLAIIASDLNLSKYLKLGEGEL---------------------K 99
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCNK-EVVFESIRPLLEPMITPETMRLQPARELNE 787
+ P L D +E++ GAIF DS N+ ++V E L + +TM L E
Sbjct: 100 SGGCNRPSILADCLEAVFGAIFKDSSFNEVQIVIEKQFVKLLNNLDLKTMCKDAKSLLQE 159
Query: 788 YCQKHHFSMKKTVAPRINGKA 808
Q S+ + + ING A
Sbjct: 160 LLQSRKISLPRYLIVNINGAA 180
>gi|254876541|ref|ZP_05249251.1| ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842562|gb|EET20976.1| ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 230
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L +L YSF++ +LLV ALTH S + + Y+RLEFLGD++L ++I LY ++P L
Sbjct: 7 RLYKILGYSFKNYTLLVRALTHRS----KTKKNYERLEFLGDSILGFVIAEVLYMEFPDL 62
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ G L+ +RS V A ++ L ++I+ + E G
Sbjct: 63 AEGKLSQIRSKLVKGVTLANLALNFKLDEYIILGASE-------------------QGGH 103
Query: 729 ESETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPARELN 786
+ E K L D+ E++ GAI++DS K+V+ +P++ + + +L
Sbjct: 104 KRE----KILEDVFEAIIGAIYLDSDFATVKKVIVNWYKPVISTLNLDDVKVKDSKSKLQ 159
Query: 787 EYCQKHHFSMKKTVAPRINGK---AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
E ++ S+ + I+GK TV+ +N K ++ A++ A++++++
Sbjct: 160 EILLQNGLSLPEYSIETIDGKDHEQEFTVKALSNDLNIKVRAKGTSRKKAEQKAAEKMIQ 219
Query: 844 SL 845
L
Sbjct: 220 IL 221
>gi|296273889|ref|YP_003656520.1| ribonuclease III [Arcobacter nitrofigilis DSM 7299]
gi|296098063|gb|ADG94013.1| ribonuclease III [Arcobacter nitrofigilis DSM 7299]
Length = 223
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 34/162 (20%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
+LE L+Y F++ L+VEALTH S+ + P +RLEFLGDAVL+ ++ YLY K+P
Sbjct: 6 NLEKCLDYQFKNKDLIVEALTHKSF---KKPYNNERLEFLGDAVLNLIVGEYLYKKFPQS 62
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
+ GDL+ +R++ VN + + + L +I + E
Sbjct: 63 NEGDLSKIRASLVNETGFTKLANEIKLGDYIYLSIAE----------------------- 99
Query: 729 ESETSFPKA--LGDIIESLSGAIFVDSGCNKEVVFESIRPLL 768
E KA L D ES+ GAI+++SG E+++P++
Sbjct: 100 ERNKGRTKASILSDAFESIMGAIYLESG------LETLKPII 135
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 423 LDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGL 482
LD+ +N + ++EA+T K ++ ++ E LE LGD+ L + L+K + +EG
Sbjct: 11 LDYQFKNKDL----IVEALTHKSFKKPYNNERLEFLGDAVLNLIVGEYLYKKFPQSNEGD 66
Query: 483 LSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKI 542
LS + +++ KL + KL +I S+ ER
Sbjct: 67 LSKIRASLVNETGFTKLANEIKLGDYIYL-----------------------SIAEER-- 101
Query: 543 YVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFL-------DRIGIKVDFVNVPYE 594
+ + K+ ++D E+++GA +L +G E + I L D+I + V F +
Sbjct: 102 ---NKGRTKASILSDAFESIMGAIYLESGLETLKPIILTLLEKSYDKINLDVLFSDYKTA 158
Query: 595 RQFQVQAE 602
Q QAE
Sbjct: 159 LQEITQAE 166
>gi|424780882|ref|ZP_18207749.1| Ribonuclease III [Catellicoccus marimammalium M35/04/3]
gi|422842583|gb|EKU27034.1| Ribonuclease III [Catellicoccus marimammalium M35/04/3]
Length = 231
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 608 RHLESLLNYSFRDPSLLVEALTHGSYM----LPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
R L+ F++ LL EA TH SY ++P C +RLE+LGDAVL+ L++ YL+
Sbjct: 6 RLLQDQYQIQFKNERLLKEAFTHSSYANEHREEQLP-CNERLEYLGDAVLELLVSTYLFK 64
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
+YP L G LT R+A V D A + + +HI E E
Sbjct: 65 EYPELPEGKLTRFRAAIVKEDSLAYFAKEVHFDEHIFLGKGE-----------------E 107
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVF 761
G + P L D+ E+ GA+++D G K F
Sbjct: 108 KANGRQR----PALLCDLFEAFLGALYLDQGLEKVQAF 141
>gi|321253833|ref|XP_003192867.1| hypothetical protein CGB_C5530W [Cryptococcus gattii WM276]
gi|317459336|gb|ADV21080.1| hypothetical protein CNC03670 [Cryptococcus gattii WM276]
Length = 916
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 183/458 (39%), Gaps = 62/458 (13%)
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLL------DHCMQNVTIPTSKVLEAITTKKCQ 447
S F + T P +H+L+ +L+ + L + +Q +T P+S + T
Sbjct: 410 SIFRTLTVFPFFIHQLECMLITYEMSTKLFRSLLHPELALQALTAPSSVNVTPWT----- 464
Query: 448 EGFHLESLETLGDSFLKYAASQQLF--KTYQNHHEGLLSVKKDR--IISNAALCKLGCDH 503
E LE LGD+ LK+ + ++ N E L V +DR ++SN L
Sbjct: 465 ----YERLEILGDTLLKFFITIHVYLHGGGANSREDSLKVWQDRHKLVSNRTLTANAIKL 520
Query: 504 KLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGR----KKVKSKTVADVV 559
L ++R + K W IP D E++ ++ + + +++ K +AD+V
Sbjct: 521 GLVDYVRDKRLKVKDW-IPRD--WELEVSTGQTVPKKAVQTSHDGPEIRRLGDKLLADIV 577
Query: 560 EALIGAFLSTGGENVGLI-FLDRIGIKVDFVN--------VPYERQFQVQAERLVNVRHL 610
EA+IGA + +I L R+ + +D +P + E V+ +
Sbjct: 578 EAIIGASYGMDKDFDNVISTLIRLNVPLDLFTTWDEIKHVLPSTDECVDTEEDGVDAGKM 637
Query: 611 ESL-----LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+SL L Y F+ + ++ + P+ R + + LG+AVLD + L KY
Sbjct: 638 DSLSTFEVLGYKFKSKKRYNDVISMSNQ--PDAKRIRENYKMLGNAVLDLHVIELLLAKY 695
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHIL----HASQELYKWINITVDSFERLS 721
P PG L++M++ + + GL + A +EL + D+ +
Sbjct: 696 PEEGPGSLSNMKTFRTTEGLRCALATELGLQDLLKDGDERAERELGRATYFMRDAKAQAD 755
Query: 722 LESTFG--------WESETSFPKALGDIIESLSGAIFVDSGCNKE----VVFESIRPLLE 769
G W++ + G +IE + GAIF DSG + E + + I P E
Sbjct: 756 AAGLSGDEQGGIHYWDN-VAVNHFTGSVIEVIYGAIFQDSGFSLEHTQRIFDDHIVPFTE 814
Query: 770 PMIT-PETMRLQPARELNEYCQKHHFSMKK--TVAPRI 804
P L P L + Q + K V P++
Sbjct: 815 KYCKGPSATDLHPKGLLTRWMQAKGCAYWKLDAVGPKL 852
>gi|451965951|ref|ZP_21919206.1| ribonuclease III [Edwardsiella tarda NBRC 105688]
gi|451315200|dbj|GAC64568.1| ribonuclease III [Edwardsiella tarda NBRC 105688]
Length = 226
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 664
+ + L+ L Y+FR LL++ALTH S + +RLEFLGD++L ++I LY++
Sbjct: 4 IVINRLQRKLGYTFRQQDLLMQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHR 59
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
+P + GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 60 FPRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKS------GGFRRESI-- 111
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPA 782
L D +E+L G IF+DS + ++ LE I+P + P
Sbjct: 112 -------------LADTVEALIGGIFLDSDIQTIERLILAWYHSRLEE-ISPGDKQKDPK 157
Query: 783 RELNEYCQKHHFSMKKTVAPRINGKA 808
L E+ Q H + + ++ G+A
Sbjct: 158 TRLQEFLQGRHLPLPSYLVVQVRGEA 183
>gi|387771311|ref|ZP_10127477.1| ribonuclease III [Pasteurella bettyae CCUG 2042]
gi|386902516|gb|EIJ67356.1| ribonuclease III [Pasteurella bettyae CCUG 2042]
Length = 224
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
L+ +NY F+D +LL +ALTH S + +RLEFLGDA+L+Y I LY+++P +
Sbjct: 7 LQRHINYQFKDVALLKQALTHRSAA----TKHNERLEFLGDAILNYTIADALYHQFPHCN 62
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G+L+ MR+ V A+ + + L +++L EL F R S+
Sbjct: 63 EGELSRMRATLVREPTLAILARQFELGEYLLLGQGEL------KSGGFRRESI------- 109
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
L D +E++ GAI +DS + LL I P + P L E
Sbjct: 110 --------LADCVEAIIGAISLDSNLTTATQTTLHWYEDLLNK-IKPGENQKDPKTRLQE 160
Query: 788 YCQKHHFSMKKTVAPRINGKA 808
Y Q H + I G+A
Sbjct: 161 YLQGHRLPLPTYEVKEIKGEA 181
>gi|328766294|gb|EGF76349.1| hypothetical protein BATDEDRAFT_92769 [Batrachochytrium
dendrobatidis JAM81]
Length = 334
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
+QRLEFLGDAVL YL +LY P L+PG L+ +R+ V N A S++ GL K+I H
Sbjct: 15 FQRLEFLGDAVLSYLAMQHLYKITPPLNPGGLSKLRAELVCNQFLACVSIQIGLVKYIRH 74
Query: 702 -------ASQELYKWINITVDSFERLSL----------ESTFGWESETSFPKALGDIIES 744
A W+ + S SL + W + PK GD+ ES
Sbjct: 75 TDMTMEAAIGRFATWVQGYLASESSTSLPISTSATQIASARMFWNKGNTAPKTAGDVYES 134
Query: 745 LSGAIFVDS 753
+ GA+FVDS
Sbjct: 135 MLGAVFVDS 143
>gi|167751472|ref|ZP_02423599.1| hypothetical protein EUBSIR_02468 [Eubacterium siraeum DSM 15702]
gi|167655280|gb|EDR99409.1| ribonuclease III [Eubacterium siraeum DSM 15702]
gi|291557094|emb|CBL34211.1| RNAse III [Eubacterium siraeum V10Sc8a]
Length = 226
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE ++ Y+F++P LL EALTH SY + R +RLEFLGD+VL +++ +L+ L
Sbjct: 4 LEQIIGYTFKNPELLKEALTHSSYTNGKHLRSNERLEFLGDSVLSIVVSEHLFENLTNLP 63
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G LT +R++ V + + K L K+I E E T G +
Sbjct: 64 EGQLTKIRASVVCENALYPFARKIDLGKYIFLGKGE-----------------EHTGGRD 106
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
+ L D E+L AI++D G FE+ R + P I P
Sbjct: 107 RHS----ILADAFEALIAAIYLDGG------FEAARSFILPFIPP 141
>gi|62258114|gb|AAX77768.1| unknown protein [synthetic construct]
Length = 265
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 49/241 (20%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
++L Y+F+D +LL+ ALTH S + + Y+RLEFLGD+VL ++I LY ++ L+ G
Sbjct: 36 NILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYKQFIDLAEG 91
Query: 672 DLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWES 730
L+ +RS V A L+S ++ +D + L G +
Sbjct: 92 KLSQLRSKLVKGATLAQLAS--------------------SLKMDEYIILGASEQGGHKR 131
Query: 731 ETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR-ELNE 787
E K L D+ E++ GAI++DS K+V+ + +P++ I +T++++ ++ +L E
Sbjct: 132 E----KILEDVFEAVIGAIYLDSDFATVKKVILKWYQPIISS-INLDTIKVKDSKSKLQE 186
Query: 788 YCQKHHFSMKKTVAPRINGK--------AAVT----VEVHANGTLFKHTHADADKETAKK 835
++ S+ + I+GK AV+ + V A GT + A+++TA+K
Sbjct: 187 ILLQNALSLPEYSIETIDGKDHEQQFTVVAVSKDLNLRVKAQGT----SRKKAEQKTAEK 242
Query: 836 V 836
+
Sbjct: 243 M 243
>gi|118498035|ref|YP_899085.1| ribonuclease III [Francisella novicida U112]
gi|194323260|ref|ZP_03057044.1| ribonuclease III [Francisella novicida FTE]
gi|208779555|ref|ZP_03246900.1| ribonuclease III [Francisella novicida FTG]
gi|254373391|ref|ZP_04988879.1| ribonuclease III [Francisella tularensis subsp. novicida GA99-3549]
gi|385793432|ref|YP_005826408.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|189043316|sp|A0Q7W6.1|RNC_FRATN RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|118423941|gb|ABK90331.1| ribonuclease III [Francisella novicida U112]
gi|151571117|gb|EDN36771.1| ribonuclease III [Francisella novicida GA99-3549]
gi|194322624|gb|EDX20104.1| ribonuclease III [Francisella tularensis subsp. novicida FTE]
gi|208744516|gb|EDZ90815.1| ribonuclease III [Francisella novicida FTG]
gi|332678757|gb|AEE87886.1| Ribonuclease III [Francisella cf. novicida Fx1]
Length = 230
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 33/200 (16%)
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
++L Y+F+D +LL+ ALTH S + + Y+RLEFLGD+VL ++I LY ++ L+ G
Sbjct: 10 NILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYKQFTDLAEG 65
Query: 672 DLTDMRSASVNNDCYA-LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWES 730
L+ +RS V A L+S ++ +D + L G +
Sbjct: 66 KLSQLRSKLVKGTTLAQLAS--------------------SLKMDEYIILGASEQGGHKR 105
Query: 731 ETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR-ELNE 787
E K L D+ E++ GAI++DS K+V+ + +P++ I +T++++ ++ +L E
Sbjct: 106 E----KILEDVFEAVIGAIYLDSDFATVKKVILKWYQPIISS-INLDTIKVKDSKSKLQE 160
Query: 788 YCQKHHFSMKKTVAPRINGK 807
++ S+ + I+GK
Sbjct: 161 ILLQNALSLPEYSIETIDGK 180
>gi|85059765|ref|YP_455467.1| ribonuclease III [Sodalis glossinidius str. 'morsitans']
gi|123519061|sp|Q2NS13.1|RNC_SODGM RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|84780285|dbj|BAE75062.1| ribonuclease III [Sodalis glossinidius str. 'morsitans']
Length = 226
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 28/202 (13%)
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
L+ L Y+F+ LL++ALTH S + +RLEFLGD++L Y+I LY ++P +
Sbjct: 8 RLQKKLGYTFQQHDLLLQALTHRSAS----SKHNERLEFLGDSILSYVIANALYQRFPRV 63
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGW 728
GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 64 DEGDMSRMRATLVRGNTLAEMAREFELGECLRLGPGELKS------GGFRRESI------ 111
Query: 729 ESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELN 786
L D +E+L G +F+DS ++++ + R L+ I+P + P L
Sbjct: 112 ---------LADTVEALIGGVFLDSDIRTVEKLILDWYRSRLDE-ISPGDKQKDPKTRLQ 161
Query: 787 EYCQKHHFSMKKTVAPRINGKA 808
EY Q H + ++ G+A
Sbjct: 162 EYLQGRHLPLPTYQVVQVRGEA 183
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T + H E LE LGDS L Y + L++ + EG +S + ++ L
Sbjct: 23 LLQALTHRSASSK-HNERLEFLGDSILSYVIANALYQRFPRVDEGDMSRMRATLVRGNTL 81
Query: 497 CKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVA 556
++ + +L +R P + K SG + + +A
Sbjct: 82 AEMAREFELGECLRLGPGELK--------SGGFR--------------------RESILA 113
Query: 557 DVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYERQ 596
D VEALIG FL + V + LD ++D ++ P ++Q
Sbjct: 114 DTVEALIGGVFLDSDIRTVEKLILDWYRSRLDEIS-PGDKQ 153
>gi|226328142|ref|ZP_03803660.1| hypothetical protein PROPEN_02033 [Proteus penneri ATCC 35198]
gi|225203846|gb|EEG86200.1| ribonuclease III [Proteus penneri ATCC 35198]
Length = 227
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
V L+ L Y+F LL++ALTH S + +RLEFLGD++L Y+I LY+++P
Sbjct: 6 VNQLQKKLGYTFTQNELLLQALTHRSAS----SKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDS---GCNKEVVFESIRPLLEPMITPETMRLQPAR 783
L D +E+L GAIF+DS K+++ L I+P + P
Sbjct: 112 -----------LADTVEALIGAIFLDSDIQNIEKKIILNWYENRLAE-ISPGDKQKDPKT 159
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q H + ++ G+A
Sbjct: 160 RLQEYLQGRHLPLPSYNVVQVRGEA 184
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 32/159 (20%)
Query: 420 NMLLDHCMQ---NVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ 476
N LL + +Q T +++L T + H E LE LGDS L Y + L+ +
Sbjct: 2 NTLLVNQLQKKLGYTFTQNELLLQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFP 61
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
EG +S + ++ L +L + +L +R P + K SG +
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK--------SGGFR------ 107
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENV 574
+ +AD VEALIGA FL + +N+
Sbjct: 108 --------------RESILADTVEALIGAIFLDSDIQNI 132
>gi|30250251|ref|NP_842321.1| ribonuclease III [Nitrosomonas europaea ATCC 19718]
gi|81436192|sp|Q820I0.1|RNC_NITEU RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|30181046|emb|CAD86236.1| rnc; ribonuclease III (RNAse III) protein [Nitrosomonas europaea
ATCC 19718]
Length = 245
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
L Y+F+ P LL EALTH S P +R EFLGD+VL+ ++ L+ ++P+L GDL
Sbjct: 31 LGYTFKQPDLLREALTHRSLGFPN----NERFEFLGDSVLNCAVSTLLFKRFPSLPEGDL 86
Query: 674 TDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETS 733
T +R+ VN + G+ + IL E + G
Sbjct: 87 TRLRANFVNQQALHRLASALGIGELILLGEGE-----------------RKSGGHHR--- 126
Query: 734 FPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT---PETMRLQPARELNEYCQ 790
P L + +E++ GAI+++SG VV + I L EP+I P+T L EY Q
Sbjct: 127 -PSILANAVEAIIGAIYLESGF--AVVEQVIVALYEPLIRQLDPDTSGKDSKTLLQEYLQ 183
Query: 791 KHHFSM 796
++
Sbjct: 184 SRKIAL 189
>gi|419683175|ref|ZP_14211884.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1213]
gi|380659791|gb|EIB75756.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1213]
Length = 224
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 28/151 (18%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYN 663
N+ LE L Y F+D +LL+ ALTH S+ + Y +RLEFLGDAVLD ++ YL++
Sbjct: 3 NIEKLEQSLTYEFKDKNLLMHALTHKSF-----KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+ + GDL+ +R+A VN +A ++ +N+ F ++ E
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFA-----------------KIANSLNLGDFIFMSVAEE 100
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSG 754
+ G E P L D +E++ GAI +++G
Sbjct: 101 NNGGKEK----PSILSDALEAIIGAIHLEAG 127
>gi|336452822|ref|YP_004607288.1| ribonuclease III [Helicobacter bizzozeronii CIII-1]
gi|335332849|emb|CCB79576.1| ribonuclease III [Helicobacter bizzozeronii CIII-1]
Length = 223
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
++ L+ L Y+F+DP LL +ALTH S + + +RLEFLGDAVLD ++ L+ ++
Sbjct: 2 LQTLQECLGYAFKDPDLLQQALTHRS---AKAHKNNERLEFLGDAVLDLVVAEILFARFG 58
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
L GDL+ MR++ VN + ++ L HIL ++ E +
Sbjct: 59 DLQEGDLSKMRASLVNEKAFFKLALLLNLQDHILISAAE-----------------ANNH 101
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMI 772
G P L E+L GAI+++SG E I+ L++ +
Sbjct: 102 GHTK----PSILASAFEALMGAIYLESG------LEPIKTLMQKLF 137
>gi|15601926|ref|NP_244998.1| ribonuclease III [Pasteurella multocida subsp. multocida str. Pm70]
gi|378774875|ref|YP_005177118.1| ribonuclease 3 [Pasteurella multocida 36950]
gi|386834840|ref|YP_006240157.1| ribonuclease III [Pasteurella multocida subsp. multocida str. 3480]
gi|13431826|sp|P57805.1|RNC_PASMU RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|12720269|gb|AAK02145.1| Rnc [Pasteurella multocida subsp. multocida str. Pm70]
gi|356597423|gb|AET16149.1| ribonuclease 3 [Pasteurella multocida 36950]
gi|385201543|gb|AFI46398.1| ribonuclease III [Pasteurella multocida subsp. multocida str. 3480]
Length = 225
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ L+ + Y F P+LL +ALTH S + + +RLEFLGDA+L+++I LY+++
Sbjct: 4 NLERLQRQIGYQFNQPALLKQALTHRSAAV----KHNERLEFLGDAILNFIIAEALYHQF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P + G+L+ MR+ V A + + L ++ EL F R S+
Sbjct: 60 PKCNEGELSRMRATLVREPTLASLARQFELGDYLSLGPGEL------KSGGFRRESI--- 110
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR 783
L D +E++ GAI +DS ++V + L+ I P + P
Sbjct: 111 ------------LADCVEAIIGAISLDSDLATTTKIVQHWYQAQLK-QIQPGDNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + I G+A TVE + + A + A++ A+++
Sbjct: 158 RLQEYLQGKRLPLPTYNVVEIKGEAHCQTFTVECYVKNIDRTFMGSGASRRKAEQAAAEK 217
Query: 841 VLKSLK 846
+L+ L+
Sbjct: 218 ILQLLE 223
>gi|379055861|emb|CCD32434.1| dicer-1, partial [Aulacorthum solani]
gi|379055863|emb|CCD32435.1| dicer-1, partial [Aulacorthum solani]
Length = 319
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 121/286 (42%), Gaps = 68/286 (23%)
Query: 406 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKY 465
+H +Q+ + + + L DH + ++ +L+A+T +G +LE LET+GDSFLKY
Sbjct: 40 VHGVQTETFSFDFQPDLNDHPGPSPSV----LLQALTMSNANDGINLERLETIGDSFLKY 95
Query: 466 AASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG------------------------- 500
A + L+ T+ N HEG LS + + +SN L +LG
Sbjct: 96 AITAYLYCTHDNVHEGKLSHLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCY 155
Query: 501 -CDHKLPGFIRTEPFDPKMW-MI-------PGDNS------------GSYELNDHSLFNE 539
HKL + +W MI P D + ++ + LF
Sbjct: 156 FVPHKLEKALINASIPTTLWNMITLPTFKDPTDKEIEEVIQQFKVGFSNEDIENTPLFVP 215
Query: 540 RKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYER 595
+ + + K++AD VEALIGA+L + G L+F+ +GI+V D + Y +
Sbjct: 216 YNLVT--QHSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLK 273
Query: 596 QFQVQAERLVN------------VRHLESLLNYSFRDPSLLVEALT 629
R V+ E L Y F+D S L++A+T
Sbjct: 274 PPSSPLLRNVDDPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMT 319
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 54/194 (27%)
Query: 621 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSAS 680
PS+L++ALT + +RLE +GD+ L Y IT YLY + + G L+ +RS
Sbjct: 64 PSVLLQALTMSN---ANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQ 120
Query: 681 VNN-DCYALSSVK-------------------------HGLHKHILHASQELYKWINITV 714
V+N + Y L +K H L K +++AS W IT+
Sbjct: 121 VSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNMITL 180
Query: 715 DSF------------------------ERLSLESTFGWESETSFP-KALGDIIESLSGAI 749
+F E L + ++ S P K++ D +E+L GA
Sbjct: 181 PTFKDPTDKEIEEVIQQFKVGFSNEDIENTPLFVPYNLVTQHSIPDKSIADCVEALIGAY 240
Query: 750 FVDSGCNKEVVFES 763
+ G ++F S
Sbjct: 241 LISCGARGALLFMS 254
>gi|255027417|ref|ZP_05299403.1| ribonuclease III [Listeria monocytogenes FSL J2-003]
Length = 151
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYM---LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ + + F+D LL +A TH SY+ E + +RLEFLGDAVL+ ++ YL+NKYP
Sbjct: 7 LQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDYLFNKYP 66
Query: 667 TLSPGDLTDMRSASVNNDCY-ALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
++ G +T MR+A V C +L +H K++ + E
Sbjct: 67 DMAEGHMTKMRAAIV---CEPSLVEFAEAVH---------FSKYVRLG-------KGEEK 107
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
G + P L D+ ES GA+++D+G +K V F LE +I P+
Sbjct: 108 AGGRTR---PALLADVFESFIGALYLDNGIDKVVTF------LERVIFPK 148
>gi|429212165|ref|ZP_19203330.1| ribonuclease III [Pseudomonas sp. M1]
gi|428156647|gb|EKX03195.1| ribonuclease III [Pseudomonas sp. M1]
Length = 229
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 28/183 (15%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
LE L Y+F+D L+V ALTH S+ R +RLEFLGDA+L+++I L++ +P
Sbjct: 8 LERKLGYTFKDQDLMVLALTHRSFA----GRNNERLEFLGDAILNFVIGEALFSHFPQAR 63
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWE 729
G L+ +R+ V + AL + L ++ S EL F R S+
Sbjct: 64 EGQLSRLRARLVKGETLALLARGFELGDYLRLGSGELKS------GGFRRESI------- 110
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARELNE 787
L D +E+L GAI++D+G + +E + + P L + TP P L E
Sbjct: 111 --------LADAMEALIGAIYLDTGMDSARERILAWLGPQLREL-TPVDTNKDPKTRLQE 161
Query: 788 YCQ 790
+ Q
Sbjct: 162 FLQ 164
>gi|421262773|ref|ZP_15713860.1| ribonuclease III [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|401690458|gb|EJS85729.1| ribonuclease III [Pasteurella multocida subsp. multocida str.
P52VAC]
Length = 225
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
N+ L+ + Y F P+LL +ALTH S + + +RLEFLGDA+L+++I LY+++
Sbjct: 4 NLDRLQRQIGYQFNQPALLKQALTHRSAAV----KHNERLEFLGDAILNFIIAEALYHQF 59
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P + G+L+ MR+ V A + + L ++ EL F R S+
Sbjct: 60 PKCNEGELSRMRATLVREPTLATLARQFELGDYLSLGPGEL------KSGGFRRESI--- 110
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDS--GCNKEVVFESIRPLLEPMITPETMRLQPAR 783
L D +E++ GAI +DS ++V + L+ I P + P
Sbjct: 111 ------------LADCVEAIIGAISLDSDLATTTKIVQHWYQAQLK-QIQPGDNQKDPKT 157
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKA---AVTVEVHANGTLFKHTHADADKETAKKVASKE 840
L EY Q + I G+A TVE + + A + A++ A+++
Sbjct: 158 RLQEYLQGKRLPLPTYNVVEIKGEAHCQTFTVECYVKNIDRTFMGSGASRRKAEQAAAEK 217
Query: 841 VLKSLK 846
+L+ L+
Sbjct: 218 ILQLLE 223
>gi|155370768|ref|YP_001426302.1| hypothetical protein FR483_N670L [Paramecium bursaria Chlorella
virus FR483]
gi|155122358|gb|ABT14226.1| hypothetical protein MT325_M672L [Paramecium bursaria chlorella
virus MT325]
gi|155124088|gb|ABT15955.1| hypothetical protein FR483_N670L [Paramecium bursaria Chlorella
virus FR483]
gi|448925364|gb|AGE48944.1| RNase III [Paramecium bursaria Chlorella virus AP110A]
gi|448927050|gb|AGE50625.1| RNase III [Paramecium bursaria Chlorella virus CVA-1]
gi|448927716|gb|AGE51289.1| RNase III [Paramecium bursaria Chlorella virus CVG-1]
gi|448928399|gb|AGE51970.1| RNase III [Paramecium bursaria Chlorella virus CVM-1]
gi|448928734|gb|AGE52304.1| RNase III [Paramecium bursaria Chlorella virus CVR-1]
gi|448934581|gb|AGE58134.1| RNase III [Paramecium bursaria Chlorella virus NW665.2]
Length = 266
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 25/232 (10%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ D L V A ++ + E ++RLEFLGD+VL +LI YLY+ +P + G
Sbjct: 48 LVGMPVGDFGLYVTAFSYNPIL--EGGETFERLEFLGDSVLGFLIAKYLYDTFPGKNEGI 105
Query: 673 LTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESET 732
LT +R V+ + ++ GLH +I+ + + LY+ GW +
Sbjct: 106 LTRIRVKFVSGKFLSKLALNLGLHNYIIMSQKGLYR------------------GWNTN- 146
Query: 733 SFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKH 792
PK L D E+L GAI++D G N F I + L ++C++
Sbjct: 147 --PKILEDAFEALIGAIYLDGGINAAKQFFMTTLARHANIQELLIDSNHKDRLAKHCRRL 204
Query: 793 HFSMKKTVA--PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVL 842
+ V R + V VH +G F K+ + +K +L
Sbjct: 205 SLGRPEFVIQFERGGANSLFIVGVHVDGNKFAEGSGTTRKDAEQDACNKALL 256
>gi|16761493|ref|NP_457110.1| ribonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|22654063|sp|Q8Z4K4.1|RNC_SALTI RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|25289227|pir||AC0829 ribonuclease III (EC 3.1.26.3) [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503793|emb|CAD02783.1| ribonuclease III [Salmonella enterica subsp. enterica serovar
Typhi]
Length = 226
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
+ L+ L Y+F LL +ALTH S + +RLEFLGD++L ++I LY+++P
Sbjct: 6 INRLQRKLGYTFNHQELLQQALTHRSAS----SKHNERLEFLGDSILSFVIANALYHRFP 61
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF 726
+ GD++ MR+ V + A + + L + + EL F R S+
Sbjct: 62 RVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKS------GGFRRESI---- 111
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVFESIRPLLEPMITPETMRLQPARE 784
L D +E+L G +F+DS ++++ + L+ I+P + P
Sbjct: 112 -----------LADTVEALIGGVFLDSNIQTVEQLILNWYKTRLDE-ISPGDKQKDPKTR 159
Query: 785 LNEYCQKHHFSMKKTVAPRINGKA 808
L EY Q HH + + ++ G+A
Sbjct: 160 LQEYLQGHHLPLPSYLVVQVRGEA 183
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,156,419,578
Number of Sequences: 23463169
Number of extensions: 547299778
Number of successful extensions: 1172179
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3753
Number of HSP's successfully gapped in prelim test: 1038
Number of HSP's that attempted gapping in prelim test: 1153198
Number of HSP's gapped (non-prelim): 12684
length of query: 852
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 700
effective length of database: 8,792,793,679
effective search space: 6154955575300
effective search space used: 6154955575300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)