BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003062
(852 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300
PE=1 SV=2
Length = 1388
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/822 (55%), Positives = 585/822 (71%), Gaps = 14/822 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YFKP P+FD+NK+ G CTLYLP +CP++ V A+ N K LKQ CL+AC +LH++GAL+D+
Sbjct: 575 YFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDH 634
Query: 92 LLPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIP 151
L+PD+VV E +QK Y+ E P YFPPELV+Q + TYH YLI +K N +
Sbjct: 635 LVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFH 694
Query: 152 AHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRV 211
+D++L R LE +I +F LE RG + V L ++G LT ++VL CRRFQI LFRV
Sbjct: 695 LNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRV 754
Query: 212 IMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQS----IDWEPVASLSFPCDIGLKHHK 267
++DH+++ L E L GL LRD + +DYLL+P++ IDWE + S++ L+ H+
Sbjct: 755 LLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHE 814
Query: 268 NCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAI 327
NCST +R++ TK G CTC++ N++V TPH+G +Y GVL +LN NSL T+ + G
Sbjct: 815 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 874
Query: 328 TYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRII 387
TY ++YEER+GIQL F E LLNGR IF +YL +++K++E + ELPPELC +I
Sbjct: 875 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVI 934
Query: 388 MGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQ 447
+ P+S+ YS+TF+PS+M R++SLL+A NLK + V IPT KVLEAITTKKC+
Sbjct: 935 LSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPKVNIPTIKVLEAITTKKCE 989
Query: 448 EGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPG 507
+ FHLESLETLGDSFLKYA QQLF+ HHEGLLS KKD +ISN LC+ GC KL G
Sbjct: 990 DQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQG 1049
Query: 508 FIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFL 567
FIR E F+PK WM+PG +S +Y L + +L R IYV R+ +K K+VADVVE+LIGA+L
Sbjct: 1050 FIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRNLKRKSVADVVESLIGAYL 1109
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEA 627
S GGE L+F++ +GIKVDF +R +QAE+LVNV ++ESLLNYSF D SLLVEA
Sbjct: 1110 SEGGELAALMFMNWVGIKVDFTTTKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEA 1169
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
LTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LSPG LTDMRSASVNN+CYA
Sbjct: 1170 LTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYA 1229
Query: 688 LSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSG 747
L +VK LHKHIL+AS L+K I+ TV FE+ SL+STFGWES+ SFPK LGD+IESL+G
Sbjct: 1230 LVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAG 1289
Query: 748 AIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGK 807
AIFVDSG NKEVVF SI+PLL MITPET++L P REL E CQK F + K
Sbjct: 1290 AIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKA-----KDF 1344
Query: 808 AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASF 849
+ TVEV A F HT +DK+ AKK+A KEVL LK S
Sbjct: 1345 DSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 1386
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FDP+ +CSFIQSRGRARMQNSDYL+M++
Sbjct: 473 FDPASNICSFIQSRGRARMQNSDYLMMVE 501
>sp|Q69LX2|DCL2B_ORYSJ Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica
GN=DCL2B PE=2 SV=2
Length = 1377
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/907 (42%), Positives = 544/907 (59%), Gaps = 72/907 (7%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR------------------------------ 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 482 FDPSATVCSFIQSRGRARMENSDYLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSIS 541
Query: 32 ------------YFK--PTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLE 77
Y++ TP FDI+K G CTL+LP + P+QTV +G LK+T CL+
Sbjct: 542 CQPLENTLCEDTYYRVESTPAFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLK 601
Query: 78 ACKKLHQIGALTDNLLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI- 133
AC++LH IGALTD+LLP++ V EE D E P YFP E V+ +++
Sbjct: 602 ACQELHAIGALTDSLLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLG 657
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
Y+CY I L+ P DI+LA++ +L S+ +F L + +V +K++G I L
Sbjct: 658 IYYCYKISLEGCPKTASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHL 716
Query: 194 TPDKVLLCRRFQIALFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPV 252
++V++ RRFQ + +I D +L+ N I ++ + + YLLLP IDW +
Sbjct: 717 NQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSM 776
Query: 253 ASLSFPC-DIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLG 311
S P + KH +C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L
Sbjct: 777 KFSSSPIYEANNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD 836
Query: 312 HLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQRE 371
L+ANS ++DG +TYK +++ R+G+ L F+ + LL G + +N+L +K++E
Sbjct: 837 -LDANSRLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNYYYKKEKE 895
Query: 372 PS-KISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 430
P + S ELPPELCRIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q
Sbjct: 896 PGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQF 954
Query: 431 TIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
+P K+LEA+TTKKCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +
Sbjct: 955 DVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNL 1014
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG---DNSGSYELNDHSLFNERKIYVTGR 547
ISNAALC+L C L G+I E F+P+ W+IP D G+ ++ S +Y +
Sbjct: 1015 ISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI---SFLAPNGMYSQRK 1071
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVN 606
+KSK +AD VEALIGA+LST GE + + +G+ ++F +P ER+ ++AE ++
Sbjct: 1072 MSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFID 1131
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
VR LE +L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP
Sbjct: 1132 VRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYP 1191
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITV-DSFERLSLEST 725
+P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL++ ++ + SF S
Sbjct: 1192 DCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGPS---- 1247
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAREL 785
+GWE+ PK LGD+IES++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L
Sbjct: 1248 YGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGL 1307
Query: 786 NEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
E+C + F + ++G ++V V A T + T + K AKK+ASK VLK L
Sbjct: 1308 QEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSATKSGPCK-LAKKLASKAVLKDL 1365
Query: 846 KASFPGT 852
A T
Sbjct: 1366 IAGHKDT 1372
>sp|Q10HL3|DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica
GN=DCL2A PE=2 SV=1
Length = 1410
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/829 (43%), Positives = 515/829 (62%), Gaps = 16/829 (1%)
Query: 32 YFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDN 91
YF P P+FDI+K G CTL+LP + P+QTV +G LK+T CL+AC++LH IGALTD+
Sbjct: 585 YFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDS 644
Query: 92 LLPDVVV---EEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKI-TYHCYLIELKQNFN 147
LLP++ V EE D E P YFP E V+ +++ Y+CY I L+
Sbjct: 645 LLPELDVPCDEEPDIVVENK----IEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPK 700
Query: 148 YDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIA 207
P DI+LA++ +L S+ +F L + +V +K++G I L ++V++ RRFQ
Sbjct: 701 TASPT-DILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTT 759
Query: 208 LFR-VIMDHNLDKLNEILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPC-DIGLKH 265
+ +I D +L+ N I ++ + + YLLLP IDW + S P + KH
Sbjct: 760 ILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANNKH 819
Query: 266 HKNCSTMSNARVVQTKSGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGG 325
+C + + ++QTK GP C C++ NS+VCTPH+ Y I+G L L+ANS ++DG
Sbjct: 820 MTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-LDANSCLPQHDGT 878
Query: 326 AITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPS-KISFELPPELC 384
+TYK +++ R+G+ L F+ + LL G + +N+L C +K++EP + S ELPPELC
Sbjct: 879 VVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCYSKKEKEPGDRYSVELPPELC 938
Query: 385 RIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK 444
RIIM P+S + + F++VPSIM R+Q +LL+V LK + L +Q +P K+LEA+TTK
Sbjct: 939 RIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQFDVPVLKILEALTTK 997
Query: 445 KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHK 504
KCQE F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K +ISNAALC+L C
Sbjct: 998 KCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSN 1057
Query: 505 LPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIG 564
L G+I E F+P+ W+IP + + S +Y + +KSK +AD VEALIG
Sbjct: 1058 LVGYIHAEEFNPRDWIIPCLDYDERDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIG 1117
Query: 565 AFLSTGGENVGLIFLDRIGIKVDF-VNVPYERQFQVQAERLVNVRHLESLLNYSFRDPSL 623
A+LST GE + + +G+ ++F +P ER+ ++AE +NVR LE +L Y F D L
Sbjct: 1118 AYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLL 1177
Query: 624 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNN 683
L+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP +P LTD+RSASVNN
Sbjct: 1178 LLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNN 1237
Query: 684 DCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIE 743
+CYA ++VK GL+KHILH+S EL++ ++ ++ F + ++GWE+ PK LGD+IE
Sbjct: 1238 NCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLGDVIE 1297
Query: 744 SLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPR 803
S++GAI++DS C+KEVV+ S++ LLEP+ TPET+ P + L E+C + F +
Sbjct: 1298 SIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYE-KNH 1356
Query: 804 INGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPGT 852
++G ++V V A T + T + K AKK+ASK VLK L A T
Sbjct: 1357 VDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKAVLKDLIAGHKDT 1405
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FDPS TVCSFIQSRGRARM+NSDYLL++ R
Sbjct: 482 FDPSATVCSFIQSRGRARMENSDYLLLVGR 511
>sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica
GN=DCL4 PE=2 SV=1
Length = 1657
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 285/870 (32%), Positives = 442/870 (50%), Gaps = 75/870 (8%)
Query: 32 YFKPTPKF-DINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQTACLEACKKLHQIGA 87
+F P+P F I+ GI C L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 601 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 660
Query: 88 LTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKIT---- 134
LTD LLP V + + + + H + P L P K+
Sbjct: 661 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK---PSGLKLDSLSN 717
Query: 135 ---YHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGK 190
Y+ I + ++ Y + L V L E + + DL + RGR+ +KHLGK
Sbjct: 718 LHFYYVKFIPIPEDRRYQM----FGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGK 773
Query: 191 IQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID---YLLLPASEQS- 246
I +K++L +FQ ++++D + + G + LEI+ YLLLP ++
Sbjct: 774 IAFEKEKMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDV--TLEINSTFYLLLPIKQKCY 831
Query: 247 -----IDWEPV----ASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVVCT 297
IDW V +S F I + H + S+ + R++ G + SVV +
Sbjct: 832 GDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLD---GIFSKTDVVGSVVFS 888
Query: 298 PHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLNGRRIFHA 357
PH+ +++ G+L +NA S + TY +H++ER+ I+L ++ LL ++IF+
Sbjct: 889 PHNNIFFFVDGILDEINAWS-----EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNL 943
Query: 358 QNYL----SKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLL 413
+N L + + + RE + ELPPELC + + S S + +PS+M+RL++LL
Sbjct: 944 RNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 1003
Query: 414 LAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFK 473
+A+ LK+++L + I S +LEA+TT+KC E LE E LGD+FLKY + F
Sbjct: 1004 VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 1063
Query: 474 TYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELND 533
TY+ EG L+ ++ +++N+ L +L KL +IR + F+P + PG D
Sbjct: 1064 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTD 1123
Query: 534 HSL-FNERKIYVTGRKK-----------VKSKTVADVVEALIGAFLSTGGENVGLIFLDR 581
+ ++ I+ R+ + K +ADVVE+LIGAFL GG FL
Sbjct: 1124 VEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHW 1183
Query: 582 IGIKVDFVNVPYERQFQVQAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 636
IGI VDF N R + L ++ LE L+ Y F+ LL++A H S+
Sbjct: 1184 IGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-Q 1242
Query: 637 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLH 696
CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +H
Sbjct: 1243 HSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 1302
Query: 697 KHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCN 756
KH++ S L I+ + + +LS S E + PKALGDI+ES GA+ +DSG N
Sbjct: 1303 KHLIKDSNHLTSAIS-KFEMYVKLS-NSEKDLLEEPACPKALGDIVESCIGAVLLDSGFN 1360
Query: 757 KEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHA 816
V++ + LL+P++T M P REL E CQ H F + + +G+ V VEV+
Sbjct: 1361 LNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNI 1420
Query: 817 NGTLFKHTHADADKETAKKVASKEVLKSLK 846
+ T A+ + + A+K A++E L LK
Sbjct: 1421 KSKIIICTAANRNSKAARKFAAQETLSKLK 1450
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TV SFIQSRGRARM S Y+++L+R
Sbjct: 502 FDLPETVASFIQSRGRARMTKSKYVVLLER 531
>sp|Q7XD96|DCL3B_ORYSJ Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica
GN=DCL3B PE=2 SV=2
Length = 1637
Score = 336 bits (861), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 267/840 (31%), Positives = 397/840 (47%), Gaps = 92/840 (10%)
Query: 31 RYFKPTPKFDINKEMGI--CTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIG 86
RYF P P F++ E G+ CTL LP N Q+++ + KQ LEACKKLHQ+G
Sbjct: 596 RYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLG 655
Query: 87 ALTDNLLP---------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTK-ITYH 136
L D+L+P +E G H L D++ IT +
Sbjct: 656 ELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLN 715
Query: 137 CYLIEL---KQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT-VNLKHLGKIQ 192
Y I+ ++ NY VL + EL+ ++ DL + ++ + GK+Q
Sbjct: 716 TYRIDFLCDQEGENY----AGFVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQ 771
Query: 193 LTPDKVLLCRRFQIALFRVIMD---HNLDKLNE-----ILKGLWLRDNLEIDYLLLPASE 244
L ++ + FQ F I H K KG ++ N E YLLLP +
Sbjct: 772 LNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRD 831
Query: 245 QS-------IDWEPVASLSFPCDIGLKHHK--------NC----STMSNARVVQTKSGPL 285
S I WE + S + + ++ NC ++ + L
Sbjct: 832 SSYIQDDLSIHWEAIESCAGAVEQLWSSYQGDENVIPVNCIPQKRRGGQEEIIHLANKSL 891
Query: 286 CTCMIYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGA----ITYKKHYEERYGIQL 341
I +SVV + H+G+IY + ++ A F G ++ +Y ++YGI +
Sbjct: 892 HCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIII 951
Query: 342 CFDQELLLNGRRIFHAQNYL-SKCR-------QEKQREPSKISFELPPELCRIIMGPMSL 393
++ LL ++ +A N L SK + + E +I +PPEL +I ++
Sbjct: 952 QHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQIHARVPPEL--LIHLDVTT 1009
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
SF +PS++HRLQSL+LA L+ + N IP + +LEAITT +C E F LE
Sbjct: 1010 DILKSFYLLPSVIHRLQSLMLASQLRREI----GYNQHIPVTLILEAITTLRCCETFSLE 1065
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
LE LGDS LKY LF Y HEG LS + + + NA L K G L G++R
Sbjct: 1066 RLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNA 1125
Query: 514 FDPKMWMIPGD--------NSG----------SYELNDHSLFNERKIYVTGRKKVKSKTV 555
FDP+ W+ PG N G Y +D S F + G + + SKT+
Sbjct: 1126 FDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFFVGKPCD-RGHRWMCSKTI 1184
Query: 556 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVPYERQFQVQAERLVNVRHL 610
+D VEAL+GA+ GG L + GI + V + ++ ++ L
Sbjct: 1185 SDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEEL 1244
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
E+ L Y+F LL+EA+TH S + CYQRLEFLGD+VLD L+T +LY + + P
Sbjct: 1245 EAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDP 1304
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS-FERLSLESTFGWE 729
G+LTD+RSA V+N+ +A + V++ +H H+ H S L + I V S E ES F
Sbjct: 1305 GELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYVRSNLECQGKESEFLQH 1364
Query: 730 SETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYC 789
+ PK LGDI+ES++GA+F+D+ N ++V+E PLL P+ITP+ + L P REL E C
Sbjct: 1365 TTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELC 1424
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD TVCS++QSRGRAR NS+++LM++R
Sbjct: 495 FDLPRTVCSYVQSRGRARRNNSEFILMIER 524
>sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1
SV=2
Length = 1909
Score = 318 bits (816), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 311/588 (52%), Gaps = 81/588 (13%)
Query: 288 CMI----YNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYG 338
CM+ +V HSG+ +Y+ + ++A + F R +G G + TY +Y+++YG
Sbjct: 1205 CMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYG 1264
Query: 339 IQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFE-----LPPELCRIIMGPMSL 393
+ L Q+ L+ GR + + +N LS R E+ E + + LPPELC ++ P+S
Sbjct: 1265 VDLNCKQQPLIKGRGVSYCKNLLSP-RFEQSGESETVLDKTYYVFLPPELC--VVHPLSG 1321
Query: 394 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLE 453
S +PSIM R++S+LLAV LKN++ + IPTSK+LEA+T CQE F E
Sbjct: 1322 SLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYE 1375
Query: 454 SLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEP 513
E LGD++LK+ S+ LF Y HEG L+ + +++SN L + L +I+ +
Sbjct: 1376 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADR 1435
Query: 514 FDPKMWMIPG----------DNSGSY-------------------ELNDHSLFNERKIYV 544
F P W PG D S+ E+ D L + Y
Sbjct: 1436 FAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSY- 1494
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPY 593
+ + SKT+ADVVEALIG + GG+ + IGI V+ VNVP
Sbjct: 1495 ---RVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPE 1551
Query: 594 ERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 653
+ ++ LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVL
Sbjct: 1552 ------SVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVL 1604
Query: 654 DYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINIT 713
D+LIT +L+ Y +L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K I
Sbjct: 1605 DHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREF 1664
Query: 714 VDSFERLSLE---STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEP 770
V + S + ++FG + PK LGDI+ES++GAIF+DSG + ++ +PLL+P
Sbjct: 1665 VKEVQTESSKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQP 1723
Query: 771 MITPETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANG 818
M+TPET+ + P REL E CQ+ ++ + N TVEV +G
Sbjct: 1724 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN---TATVEVFIDG 1768
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LM++R
Sbjct: 748 FDLAKTVLAYIQSRGRARKPGSDYILMVER 777
>sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica
GN=DCL3A PE=2 SV=1
Length = 1651
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 265/897 (29%), Positives = 417/897 (46%), Gaps = 107/897 (11%)
Query: 34 KPTPKFDINKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQTACLEACKKLHQIGALTDN 91
KPT +F + + +CTL LP + +Q ++ N+ KQ CL+ACKKLH++GAL D+
Sbjct: 607 KPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDH 666
Query: 92 L-------LPDVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQ 144
L +P++V + + + N + T + Y K
Sbjct: 667 LCLSVEDPVPEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY----KM 722
Query: 145 NFNYDIPAH---DIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLC 201
NF D + VL + L E+ + DL + + ++ G ++L ++
Sbjct: 723 NFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQA 782
Query: 202 RRFQIALFRVIMDHNLDK-----------LNEILKGLWLRDNLEIDYLLLPA-----SEQ 245
+ FQ LF + + LN+ +W N YLLLP S
Sbjct: 783 KLFQGLLFNGLFGKLFTRSKVPNAPREFILNKEDTFVW---NTASVYLLLPTNPSFDSNV 839
Query: 246 SIDWEPVASLSFPCDIGLKHHKNC---------STMSNARVVQTKSGPLCTCMIYNSVVC 296
I+W + + + + + + S + ++ + + + VV
Sbjct: 840 CINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVL 899
Query: 297 TPHSGQIYYITGVLGHLNANSLFTRNDGGA-------ITYKKHYEERYGIQLCFDQELLL 349
H+G+IY + L+ +S F DG + T+ ++++++YGI L + LL
Sbjct: 900 AVHTGKIYTALDIT-ELSGDSAF---DGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLL 955
Query: 350 NGRRIFHAQNYLSKCRQEKQREPSKIS------------FELPPELCRIIMGPMSLSTFY 397
+ + N LS +++ +S +PPEL +I + +
Sbjct: 956 VLKPSHNPHNLLSSKFRDEGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILR 1013
Query: 398 SFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLET 457
SF P++M+R++SL LA L++ + + I + +LEAITT +C E F +E LE
Sbjct: 1014 SFYLFPALMYRIESLTLASQLRSEI---GYSDSNISSFLILEAITTLRCSEDFSMERLEL 1070
Query: 458 LGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPK 517
LGDS LKYA S LF + N EG LS + +I NA L KLG + + G++R FDP+
Sbjct: 1071 LGDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPR 1130
Query: 518 MWMIPGDNS-----------GSYELNDHSLFNERKIYV-----TGRKKVKSKTVADVVEA 561
W+ PG S +D + +++ I + G + + SKT+AD VEA
Sbjct: 1131 RWLAPGQLSIRPSPCECPVKSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCVEA 1190
Query: 562 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVR----------HLE 611
+IGA+ + GG + L +GI + E VQA +V+ LE
Sbjct: 1191 IIGAYYAGGGLRAAMAVLKWLGIGAEI-----EEDLIVQAILSASVQTYLPKDNVFEMLE 1245
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
+ L YSF LLVEALTH S CY+RLEFLGDAVLD L+T YL+N + + G
Sbjct: 1246 AKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEG 1305
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST-FGWES 730
+LTD+RSASVNN+ +A +VKH H + H+S L I V+ E S++ +
Sbjct: 1306 ELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDG 1365
Query: 731 ETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQ 790
PK LGDI+ES++GAI +D+ + +VV+ PLL P++TPE + L P REL E+C
Sbjct: 1366 LPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCG 1425
Query: 791 KHHFSMKKTVAPRINGKAAV-TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
KH + + + R G V T++V L ++ AK AS +LK L+
Sbjct: 1426 KHGYFV--GINCRDQGDTVVATLDVQLKEVLLVRQGFSKKRKDAKAHASSLLLKDLE 1480
Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD T S++QSRGRAR ++S Y+LM++R
Sbjct: 500 FDLPRTTRSYVQSRGRARQEDSQYILMIER 529
>sp|Q8LMR2|DCL1_ORYSJ Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica
GN=DCL1 PE=3 SV=1
Length = 1883
Score = 315 bits (807), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 320/603 (53%), Gaps = 67/603 (11%)
Query: 294 VVCTPHSGQIYYITGVLGHLNANSLFTRNDG--GAI---TYKKHYEERYGIQLCFDQELL 348
VV HSG+ +Y+ + ++NA + F R +G G + +Y +Y+++YG++L + ++ L
Sbjct: 1189 VVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPL 1248
Query: 349 LNGRRIFHAQNYLSKCRQEKQREPSKIS--------FELPPELCRIIMGPMSLSTFYSFT 400
+ R + + +N LS + S LPPELC ++ P+ S
Sbjct: 1249 IRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 1306
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGD 460
+PSIM R++S+LLAV LK+++ + +P +K+LEA+T CQE E E LGD
Sbjct: 1307 RLPSIMRRVESMLLAVQLKDII------DYPVPATKILEALTAASCQETLCYERAELLGD 1360
Query: 461 SFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWM 520
++LK+ S+ LF Y HEG L+ + +++SN L + + L +I+ + F P W
Sbjct: 1361 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWA 1420
Query: 521 IPG------DNSGSYELNDHSLFNERKIYVTGRKK------------------------V 550
PG + S YE S+F+E +K+ +
Sbjct: 1421 APGVLPVFDEESREYE---PSIFDEESTGCELQKESYDDYADNMQEDGEIEGDSSCYRVL 1477
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYERQFQVQAE--RLVN 606
SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +N
Sbjct: 1478 SSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSIN 1537
Query: 607 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
L+ +L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYT 1596
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE--- 723
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L I V + L+
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656
Query: 724 STFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPAR 783
++FG + PK LGDI+ES++GAIF+DSG + VV++ +PLL PM+TPET+ + P R
Sbjct: 1657 NSFGL-GDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVR 1715
Query: 784 ELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLK 843
EL E CQ+ ++ + N TVEV +G + K+ A+K+A++ L
Sbjct: 1716 ELQERCQQQAEGLEYKASRAGN---IATVEVFVDGVQIGVAQ-NPQKKMAQKLAARNALV 1771
Query: 844 SLK 846
LK
Sbjct: 1772 VLK 1774
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 27 LMLKRYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQ 84
++++Y KP + + C L LP N P + + +I+ +Q CL ACKKLH+
Sbjct: 840 FIMQKYEKPGGSVEYS-----CKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHE 894
Query: 85 IGALTDNLLPDVVVEEHDAQKHGNE----PYDAEHPIYFPPELVN--------------Q 126
+GA TD LLPD E + + +E P A H ++P + + Q
Sbjct: 895 MGAFTDTLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQ 954
Query: 127 CPQDTKI---TYHCYLIELKQN-FNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLT 182
Q K+ + +C + ++ F + I+ EL++E+ DL V R +T
Sbjct: 955 NSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFG--NELDAEVLSTTMDLFVARTMIT 1012
Query: 183 -VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLD 218
+L G+I++T +++L + F + L +++D ++D
Sbjct: 1013 KASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVD 1049
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD + TV ++IQSRGRAR SDY+LML+R
Sbjct: 725 FDLAKTVLAYIQSRGRARKPGSDYILMLER 754
>sp|P84634|DCL4_ARATH Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2
Length = 1702
Score = 313 bits (802), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 266/886 (30%), Positives = 422/886 (47%), Gaps = 99/886 (11%)
Query: 32 YFKPTPKFDIN--KEMG--ICTLYLPNNCPIQTVIAQ--GNIKTLKQTACLEACKKLHQI 85
+F+P P+F E G IC + LP N PI + + + + K+ ACL+A +LH +
Sbjct: 672 FFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNL 731
Query: 86 GALTDNLLPDVVVEEHDA-----------QKHG---NEPYDAEHPIYFPPELVNQCPQDT 131
G L D LLPD E D + G + Y+ P+ F + P +
Sbjct: 732 GVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGDLYEMRVPVLFKQKWD---PSTS 788
Query: 132 KITYHCYLIELKQNFNYDIPAHDIV----LAVRTELESEIKKVNFDLEVDRGR-LTVNLK 186
+ H Y I + PA I +++ L E + ++ DL + R ++V +
Sbjct: 789 CVNLHSYYIMFVPH-----PADRIYKKFGFFMKSPLPVEAETMDIDLHLAHQRSVSVKIF 843
Query: 187 HLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEID----YLLLP- 241
G + D++ L FQ +V+ + +L L L+D+ YLLLP
Sbjct: 844 PSGVTEFDNDEIRLAELFQEIALKVLFERG--ELIPDFVPLELQDSSRTSKSTFYLLLPL 901
Query: 242 -----ASEQSIDWEPVAS-LSFPCDIGLKHHKNCSTM------SNARVVQTKSGPLCTCM 289
S S+DW + + LS P K S + + ++ +G
Sbjct: 902 CLHDGESVISVDWVTIRNCLSSPI------FKTPSVLVEDIFPPSGSHLKLANGCWNIDD 955
Query: 290 IYNSVVCTPHSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYE---ERYGIQLCFDQE 346
+ NS+V T +S Q Y++ + N S + + K H E + YG++L +
Sbjct: 956 VKNSLVFTTYSKQFYFVADICHGRNGFSPVKES-----STKSHVESIYKLYGVELKHPAQ 1010
Query: 347 LLLNGRRIFHAQNYLSKCRQEKQREPSKIS---FELPPELCRIIMGPMSLSTFYSFTFVP 403
LL + + H +N L R + EP ++ E+PPEL + + +S S + +P
Sbjct: 1011 PLLRVKPLCHVRNLLHN-RMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLP 1069
Query: 404 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFL 463
SIMHR+++LL+A+ LK++L + + +VLEA+TT+KC E LE LE LGD+FL
Sbjct: 1070 SIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFL 1129
Query: 464 KYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPG 523
K+A S+ LF + + EG L+ ++ +++N+ LC+L L +IR + DP + G
Sbjct: 1130 KFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFG 1189
Query: 524 -------DNSGSYELNDHSLFNERKIYVTGRKKVK---------SKTVADVVEALIGAFL 567
D S E+ HSL + I + +++ KT+ADVVEAL+GAFL
Sbjct: 1190 HPCRVTCDEVASKEV--HSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFL 1247
Query: 568 STGGENVGLIFLDRIGIKVDFVNVPYE------RQFQVQAERLVNVRHLESLLNYSFRDP 621
G + FL IG+ VDF ++ + R++ R N+ LE+ L+Y F
Sbjct: 1248 VDSGFKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTR-NNLETLENQLDYKFLHK 1306
Query: 622 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASV 681
LLV+A H SY CYQRLEFLGDAVLDYL+T Y + +P L PG LTD+RS SV
Sbjct: 1307 GLLVQAFIHPSYN-RHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSV 1365
Query: 682 NNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDI 741
NN+ A +V L + + S L++ I + L S G PK LGD+
Sbjct: 1366 NNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLAS--GQSEGPRCPKVLGDL 1423
Query: 742 IESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARELNEYCQKHHFSMKKTVA 801
+ES GA+F+D G N V+ + L+P+ +++ P +EL E CQ + + ++ A
Sbjct: 1424 VESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWD-REISA 1482
Query: 802 PRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKA 847
+ +G V ++V NG + +K K A++ ++ +LKA
Sbjct: 1483 TKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKA 1528
Score = 37.4 bits (85), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLML 29
+D TV SFIQSRGRARM S+Y ++
Sbjct: 573 YDLPETVTSFIQSRGRARMPQSEYAFLV 600
>sp|Q9LXW7|DCL3_ARATH Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana GN=DCL3 PE=1
SV=2
Length = 1580
Score = 303 bits (776), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 244/796 (30%), Positives = 386/796 (48%), Gaps = 108/796 (13%)
Query: 134 TYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQL 193
T+ Y + N + ++ + L + + L ++ KV DL + R + ++ G+I+L
Sbjct: 661 TFQAYKFDFCCNISGEVYS-SFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRL 719
Query: 194 TPDKVLLCRRFQIALFR------VIMDHNLDKLNEIL-----KGLWLRDNLEIDYLLLP- 241
+ ++++ + FQ F + + E L LW + +LLLP
Sbjct: 720 SQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLW---HPAFMFLLLPV 776
Query: 242 -----ASEQSIDWEPVASLSFPCDIGLKHH---------KNCSTMSNARVVQTKSGPLCT 287
AS +IDW + S + + K+ C+T S V+
Sbjct: 777 ETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETN 836
Query: 288 CMIYNS-----------VVCTPHSGQIYYITGVLGHLNANSLFTRN-DGGAITYKKHYEE 335
+ + + VV H+G+IY I + +A S F + G TY +++ +
Sbjct: 837 LIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNK 896
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQE------------KQREPSKISFELPPEL 383
+YGI L + L+ ++ HA N L +E ++R+P+ I LPPEL
Sbjct: 897 KYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPN-IHAHLPPEL 955
Query: 384 CRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITT 443
I P ++ S +PS+MHRL+SL+LA L+ + D + N +I ++ +LEA+TT
Sbjct: 956 LARIDVPRAV--LKSIYLLPSVMHRLESLMLASQLREEI-DCSIDNFSISSTSILEAVTT 1012
Query: 444 KKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDH 503
C E F +E LE LGDS LKY AS LF Y + EG LS ++ IISN+ L +L
Sbjct: 1013 LTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSR 1072
Query: 504 KLPGFIRTEPFDPKMWMIPGDNS----------GSYELN-DHSLFNERKIYVTGR----- 547
KL G+IR F+P+ W PG S + E+ D F E G+
Sbjct: 1073 KLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMG 1132
Query: 548 -KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVN 606
+ V SK+V+D EALIGA+ +GG + L + +GI VDF + V+A V+
Sbjct: 1133 HRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDF-----DPNLVVEAINRVS 1187
Query: 607 VR----------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 656
+R LE + + F LL EA+TH S L E Y+RLEFLGD+VLD+L
Sbjct: 1188 LRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSS--LRE-SYSYERLEFLGDSVLDFL 1244
Query: 657 ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS 716
IT +L+N Y PG++TD+RSA VNN+ +A +VK+ LH H+ + L IN + S
Sbjct: 1245 ITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMS 1304
Query: 717 FER-----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPM 771
F++ S+ S G PKALGD++ES++GA+ +D+ + + V+ PLL P+
Sbjct: 1305 FQKPDETGRSIPSIQG-------PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPL 1357
Query: 772 ITPETMRLQPARELNEYCQKHHFSMKKTVAPRING-KAAVTVEVHANGTLFKHTHADADK 830
+TP+ ++L P RELNE C + + V +G KA T+++ + L ++
Sbjct: 1358 VTPDKLQLPPYRELNELCDSLGYFFR--VKCSNDGVKAQATIQLQLDDVLLTGDGSEQTN 1415
Query: 831 ETAKKVASKEVLKSLK 846
+ A A+ +L L+
Sbjct: 1416 KLALGKAASHLLTQLE 1431
>sp|P34529|DCR1_CAEEL Endoribonuclease dcr-1 OS=Caenorhabditis elegans GN=dcr-1 PE=1 SV=3
Length = 1910
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 224/515 (43%), Gaps = 123/515 (23%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L A+TT +G LE ET+GDSFLK+A + L+ T + HEG LS + + +SN L
Sbjct: 1397 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLLDQHEGKLSFARSKEVSNCNL 1456
Query: 497 CKLG----------------------------CDHKLPG------------------FIR 510
+LG CD K P I
Sbjct: 1457 YRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEIERILDGQVIE 1516
Query: 511 TEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTG------------RKKVKSKTVADV 558
+P + W I GD S S ++ ++ V ++ + K++AD
Sbjct: 1517 EKPENKTGWDIGGDVSKSTTDGIETITFPKQARVGNDDISPLPYNLLTQQHISDKSIADA 1576
Query: 559 VEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYE---------- 594
VEALIG L T G N L ++ +G+KV F++ P
Sbjct: 1577 VEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTNPNASLNFLNN 1636
Query: 595 --RQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 652
+QFQ LE + Y F++ + LV+A TH SY+ + CYQRLEFLGDAV
Sbjct: 1637 LWQQFQFT--------QLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAV 1688
Query: 653 LDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINI 712
LDY+IT YL+ SPG LTD+RSA VNN +A +VK KH + LY I
Sbjct: 1689 LDYMITRYLFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEK 1748
Query: 713 TVDSFERLSLESTFGWE---------------SETSFPKALGDIIESLSGAIFVDSGCNK 757
V + ++ F E + PKA+GDI ES++GAI++DSG N
Sbjct: 1749 FVKLCSERNFDTNFNAEMYMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNL 1808
Query: 758 EVVFESIRPLLEPMIT------PETMRLQPARELNEYCQ-KHHFSMKKTVAPRINGKAAV 810
+ ++ I ++ I P + P REL E+ Q K FS + + +GK V
Sbjct: 1809 DTTWQVIFHMMRGTIELCCANPPRS----PIRELMEFEQSKVRFSKMERILE--SGKVRV 1862
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSL 845
TVEV N + T + AK A+K LK L
Sbjct: 1863 TVEVVNN---MRFTGMGRNYRIAKATAAKRALKYL 1894
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 50 LYLPNNCPIQTVIA----QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
L LP N PI+ I N KT + LEAC++LH G L DNLLP
Sbjct: 611 LLLPINSPIKHAIVLKNPMPNKKTAQMAVALEACRQLHLEGELDDNLLP 659
>sp|Q6TV19|DICER_DANRE Endoribonuclease Dicer OS=Danio rerio GN=dicer1 PE=2 SV=2
Length = 1865
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 180/341 (52%), Gaps = 50/341 (14%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPY 593
+ K++AD VEAL+G +L++ GE +FL +G+KV ++ +P
Sbjct: 1530 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 1589
Query: 594 ERQFQ-VQAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 647
F+ AER +N + ES +NY+F++ + L++A TH SY I CYQRLEF
Sbjct: 1590 RCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1649
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELY 707
LGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ S EL+
Sbjct: 1650 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1709
Query: 708 KWINITVDSFERLSLEST--FGWESE-------------TSFPKALGDIIESLSGAIFVD 752
+D F + LE G +SE PKA+GDI ESL+GAI++D
Sbjct: 1710 H----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMD 1765
Query: 753 SGCNKEVVFESIRPLLEPMITPETMRL--QPARELNEYCQKHHFSMKKTVAPRI-NGKAA 809
SG + E V++ P++ P+I + + P REL E + + K + A R +GK
Sbjct: 1766 SGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE---TAKFSPAERTYDGKVR 1822
Query: 810 VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
VTVEV G K AK A++ L+SLKA+ P
Sbjct: 1823 VTVEVVGKG---KFKGVGRSYRIAKSAAARRALRSLKANQP 1860
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1279 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1338
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1339 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1366
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1275 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1327
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1328 MRSKKVSN 1335
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIAQG--NIKTLKQTA-CLEACKKLHQIGALTDNLLP 94
TL+LP N P++ + N L + A L C+KLH+IG L D+L+P
Sbjct: 652 TLFLPINSPLRVPVTGPVMNCARLAEKAVALLCCEKLHKIGELDDHLMP 700
>sp|A0MQH0|DICER_CRIGR Endoribonuclease Dicer OS=Cricetulus griseus GN=DICER1 PE=2 SV=3
Length = 1917
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 178/373 (47%), Gaps = 82/373 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P + F Q
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQ 1609
Query: 601 ----------------------------------------AERLVN-----VRHLESLLN 615
AE+ +N + E +N
Sbjct: 1610 QKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKIN 1669
Query: 616 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1670 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1729
Query: 676 MRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE-- 731
+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1730 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELR 1785
Query: 732 -----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL- 779
PKA+GDI ESL+GAI++DSG + EVV++ P++ P+I + +
Sbjct: 1786 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVP 1845
Query: 780 -QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
P REL E + + K + A R +GK VTVEV G K AK A
Sbjct: 1846 RSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAA 1899
Query: 838 SKEVLKSLKASFP 850
++ L+SLKA+ P
Sbjct: 1900 ARRALRSLKANQP 1912
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I G ++ ++ L C+KLH+IG L ++L+P
Sbjct: 666 TLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 714
>sp|Q6TUI4|DICER_BOVIN Endoribonuclease Dicer OS=Bos taurus GN=DICER1 PE=2 SV=3
Length = 1923
Score = 163 bits (412), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 172/373 (46%), Gaps = 81/373 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1614
Query: 601 AERLVN---------------------------------------VRHL-------ESLL 614
+ L +RHL E +
Sbjct: 1615 QKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEKKI 1674
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1735 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1790
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E V++ P++ P+I + +
Sbjct: 1791 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANV 1850
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVA 837
P REL E + + +GK VTVEV G K AK A
Sbjct: 1851 PRSPVRELLE--MEPEITKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAA 1905
Query: 838 SKEVLKSLKASFP 850
++ L+SLKA+ P
Sbjct: 1906 ARRALRSLKANQP 1918
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQ-QLFKTYQNHHEGLLSVKKDRIISNAA 495
+L+A+T +GF+LE LE LGDSFLK+A + L + HEG LS + + +SN
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNCN 1356
Query: 496 LCKLGCDHKLPGFIRTEPFDPKMWMIP 522
L +LG LP + FDP + +P
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDPPVNGLP 1383
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 665 TLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 713
>sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3
Length = 1922
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 175/374 (46%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYERQFQVQ 600
+ K++AD VEAL+G +L++ GE +FL +G+KV + P F Q
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQ 1613
Query: 601 AERLV---------------------------------------NVRHL-------ESLL 614
+ L + HL E +
Sbjct: 1614 QKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1673
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1674 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1733
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1734 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1789
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E V++ P++ P+I + +
Sbjct: 1790 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANV 1849
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1850 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1903
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1904 AARRALRSLKANQP 1917
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 666 TLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
>sp|B3DLA6|DICER_XENTR Endoribonuclease Dicer OS=Xenopus tropicalis GN=dicer1 PE=2 SV=2
Length = 1893
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 177/369 (47%), Gaps = 80/369 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 586
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1528 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPEVRKLVTNTNVISASSSYQNS 1587
Query: 587 -----------------------DFVNVPYERQFQ-VQAERLVN-----VRHLESLLNYS 617
++ +P F+ AE+ ++ + E +NY
Sbjct: 1588 TRDNCTLTARTNTDLSSCKGIDYGYLKIPPRCMFEHPDAEKTLDHLISGFENFEKKINYP 1647
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+R
Sbjct: 1648 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1707
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE---- 731
SA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1708 SALVNNTIFASLAVKYDYHKYFKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRS 1763
Query: 732 ---------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--Q 780
PKA+GDI ESL+GAI++DSG + E V+ P+++P+I + +
Sbjct: 1764 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPRS 1823
Query: 781 PARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVASK 839
P REL E + + K + A R +GK VTVEV G K AK A++
Sbjct: 1824 PVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAAR 1877
Query: 840 EVLKSLKAS 848
L+SLKA+
Sbjct: 1878 RALRSLKAN 1886
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1274 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1333
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG------DNSGSYELNDHS 535
+LG P + FDP + W+ PG NS +E N+ S
Sbjct: 1334 YRLGKKKGSPSRMVVSIFDPPVNWLPPGYIVNQDKNSDKWESNETS 1379
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1270 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1322
Query: 676 MRSASVNN-DCYALSSVKHGLHKHILHASQELYKWI 710
MRS V+N + Y L K + ++ W+
Sbjct: 1323 MRSKKVSNCNLYRLGKKKGSPSRMVVSIFDPPVNWL 1358
Score = 38.1 bits (87), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIAQGNI---KTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I + + + L CKKLH+IG L D+L+P
Sbjct: 657 TLYLPINSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMP 705
>sp|Q25BN1|DICER_CHICK Endoribonuclease Dicer OS=Gallus gallus GN=DICER1 PE=2 SV=3
Length = 1921
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 179/374 (47%), Gaps = 83/374 (22%)
Query: 550 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 588
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATGENCNSE 1612
Query: 589 ----------------------------VNVPYERQF-QVQAERLVN-----VRHLESLL 614
+ +P F AE+ +N + E +
Sbjct: 1613 QKNLSPNSVSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1672
Query: 615 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLT 674
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 675 DMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST--FGWESE- 731
D+RSA VNN +A +VK+ HK+ S EL+ +D F + +E G +SE
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1788
Query: 732 ------------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL 779
PKA+GDI ESL+GAI++DSG + E+V++ P++ P+I + +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 780 --QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKV 836
P REL E + + K + A R +GK VTVEV G K AK
Sbjct: 1849 PRSPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSA 1902
Query: 837 ASKEVLKSLKASFP 850
A++ L+SLKA+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 620 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTD 675
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 676 MRSASVNN 683
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
Score = 37.0 bits (84), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIAQGNI---KTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I + + ++ L C+KLH+IG L D+L+P
Sbjct: 666 TLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 453 ESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTE 512
+ LE LGD+ L Y ++ L++ + H G+L+ + +++N L + + +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKA- 1759
Query: 513 PFDPKMWMIPGD------NSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAF 566
P+++ + D + D L + K + D+ E+L GA
Sbjct: 1760 -VSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAI 1818
Query: 567 LSTGGENVGLIF 578
G ++ +++
Sbjct: 1819 YMDSGMSLEMVW 1830
>sp|Q8R418|DICER_MOUSE Endoribonuclease Dicer OS=Mus musculus GN=Dicer1 PE=1 SV=3
Length = 1916
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 179/372 (48%), Gaps = 81/372 (21%)
Query: 550 VKSKTVADVVEALIGAFLSTGGE--------NVGLIFLDRI------------------- 582
+ K++AD VEAL+G +L++ GE ++GL L I
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1609
Query: 583 ------------------GIKVDF--VNVPYERQF-QVQAERLVN-----VRHLESLLNY 616
G +++ + +P F AE+ +N E +NY
Sbjct: 1610 QKSLSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1669
Query: 617 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDM 676
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1670 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1729
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--GWESE--- 731
RSA VNN +A +VK+ HK+ S EL+ +D F + LE G +SE
Sbjct: 1730 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1785
Query: 732 ----------TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
PKA+GDI ESL+GAI++DSG + EVV++ P+++P+I + +
Sbjct: 1786 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1845
Query: 780 QPARELNEYCQKHHFSMKKTVAPRI-NGKAAVTVEVHANGTLFKHTHADADKETAKKVAS 838
P REL E + + K + A R +GK VTVEV G K AK A+
Sbjct: 1846 SPVRELLEMEPE---TAKFSPAERTYDGKVRVTVEVVGKG---KFKGVGRSYRIAKSAAA 1899
Query: 839 KEVLKSLKASFP 850
+ L+SLKA+ P
Sbjct: 1900 RRALRSLKANQP 1911
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 437 VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAAL 496
+L+A+T +GF+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 497 CKLGCDHKLPGFIRTEPFDPKM-WMIPG 523
+LG LP + FDP + W+ PG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 42.4 bits (98), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 614 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 666 PTLSPGDLTDMRSASVNN 683
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 49 TLYLPNNCPIQTVIA---QGNIKTLKQTACLEACKKLHQIGALTDNLLP 94
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 666 TLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 714
>sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl2 PE=3 SV=1
Length = 1389
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 203/448 (45%), Gaps = 62/448 (13%)
Query: 352 RRIFHAQNYLSK---CRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
R + H Q +K +E EP + + C I P S + F+ ++ +
Sbjct: 856 RNLLHRQTLATKKLENDKEDTPEPVNKMRTVAADQCTIDRLPFSNAILG--LFISVVVQQ 913
Query: 409 LQSLLLAVNLKNMLLDHCMQNVTIPTSK-VLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
L++ L+A L +L ++V +++ ++ AI+ Q + + E LGDS LK++
Sbjct: 914 LETELIATKLYETIL----RDVGFTSTQHIITAISAPSAQALTNYQRYEFLGDSILKFSV 969
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
S QLF + N HEG LS +D I+ N L K D L F+ T+ F P+ W P
Sbjct: 970 SCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKWSAP----- 1024
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
L +ER V G+++V SK +ADVVEALIGA GG + R +++
Sbjct: 1025 --------LISERLERVAGKRQVSSKVLADVVEALIGAAYMDGGHAAAQACIRRFLPEIN 1076
Query: 588 FVNV---PYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
++ R + R L+ ++Y+F + SLLVEALTH S + YQR
Sbjct: 1077 LHSLDTRTLSRSVAPEGARQTIHDRLKRHISYTFENESLLVEALTHPSCDYDASTQSYQR 1136
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQ 704
LEFLGDAVLD +I ++N + G +T ++ A VN + A ++ + + Q
Sbjct: 1137 LEFLGDAVLDMIIVSAIFNHPVQMPQGHMTKIKHALVNANLLAFLCMEFAIPEERASVEQ 1196
Query: 705 ---------------ELYKWI--------NITVDSFER-----------LSLESTFGWE- 729
EL++++ N S R L + + W+
Sbjct: 1197 ISTLQFEVISNEELVELWRFMRYRGLDLNNARDASLARHRALRDEILHSLQHDPHYPWQA 1256
Query: 730 -SETSFPKALGDIIESLSGAIFVDSGCN 756
S S K DI+ES+ GAIFVDSG +
Sbjct: 1257 LSRLSADKFFSDIMESILGAIFVDSGGD 1284
>sp|Q09884|DCR1_SCHPO Protein Dicer OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=dcr1 PE=1 SV=1
Length = 1374
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 190/378 (50%), Gaps = 30/378 (7%)
Query: 390 PMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEG 449
P+S S +PSI++ +++LL+A + ++H + I T+ +A+T+ + Q
Sbjct: 873 PVSRHLKNSALLIPSILYHIENLLVA----SSFIEHFRLDCKIDTA--CQALTSAESQLN 926
Query: 450 FHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI 509
F + LE GD FLK AS +F + + E L + +IISN L K+ D +LP +
Sbjct: 927 FDYDRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCELPKYA 986
Query: 510 RTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLST 569
+ P + + W G + + +++ +K+ K +AD+VEA IGA L
Sbjct: 987 LSTPLEIRHWCPYGFQKSTSDKCRYAVL----------QKLSVKRIADMVEASIGACLLD 1036
Query: 570 GGENVGLIFLDRIGIKV-DFVNV-PYERQFQVQ--AERLVNVR-----HLESLLNYSFRD 620
G + L + + + D N + F + A+ L NV+ ++E + YSF++
Sbjct: 1037 SGLDSALKICKSLSVGLLDISNWDEWNNYFDLNTYADSLRNVQFPYSSYIEETIGYSFKN 1096
Query: 621 PSLLVEALTHGSYMLPE-IPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSA 679
LL A H S M + I YQ+LEFLGDAVLDY+I YLY KYP + G+LTD +S
Sbjct: 1097 KKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNATSGELTDYKSF 1156
Query: 680 SVNNDCYALSSVKHGLHKHILHASQELYKWI---NITVDSFERLSLESTFGWESETSFPK 736
V N + LHK+I H S + I +++F + E+ + W E PK
Sbjct: 1157 YVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASENPWFW-FEIDSPK 1215
Query: 737 ALGDIIESLSGAIFVDSG 754
+ D +E++ AIF+DSG
Sbjct: 1216 FISDTLEAMICAIFLDSG 1233
>sp|Q9VCU9|DCR1_DROME Endoribonuclease Dcr-1 OS=Drosophila melanogaster GN=Dcr-1 PE=1 SV=1
Length = 2249
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 170/374 (45%), Gaps = 74/374 (19%)
Query: 532 NDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 591
ND S F + + + K++AD VEALIGA+L G L+F+ +G++V +
Sbjct: 1882 NDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----L 1935
Query: 592 PYERQF-------------QVQAERLVNV-----------------------------RH 609
P RQ + AE +V V
Sbjct: 1936 PITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1995
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
E L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1996 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 2055
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTF--- 726
PG LTD+RSA VNN +A +V+HG HK H S L N +D F R+ E+
Sbjct: 2056 PGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHCIS 2111
Query: 727 -----------GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMIT-- 773
+ PKALGD+ ES++GAIF+DS + +VV+ ++ P I
Sbjct: 2112 EEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQF 2171
Query: 774 PETMRLQPARELNEY-CQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKET 832
++ P REL E + F + +A + VTV+V GT +
Sbjct: 2172 SNSVPKSPIRELLELEPETAKFGKPEKLAD--GRRVRVTVDVFCKGTF---RGIGRNYRI 2226
Query: 833 AKKVASKEVLKSLK 846
AK A+K L+ LK
Sbjct: 2227 AKCTAAKCALRQLK 2240
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 435 SKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
S +L+A+T +G +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N
Sbjct: 1724 SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANL 1783
Query: 495 ALCKLGCDHKLPGFIRTEPFDP-KMWMIP 522
L +LG +L ++ F+P W+ P
Sbjct: 1784 NLYRLGRRKRLGEYMIATKFEPHDNWLPP 1812
Score = 41.2 bits (95), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 167/447 (37%), Gaps = 87/447 (19%)
Query: 42 NKEMGIC----TLYLPNNCPIQTVIAQGNIKT---LKQTACLEACKKLHQIGALTDNLLP 94
N+ G+ TL LP N P++ I + T ++ A L+AC +LH+IG L D L P
Sbjct: 853 NERAGVTLFQYTLRLPINSPLKHDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 912
Query: 95 ----------------------DVVVEEHDAQKHGNEPYDAEHPIYFPPELVNQCPQD-- 130
+ +V+ D + G + E + P
Sbjct: 913 IGKEGFRALEPDWECFELEPEDEQIVQLSDEPRPGTTKRRQYYYKRIASEFCDCRPVAGA 972
Query: 131 ------TKITYHCYLIELKQNFNYDI-PAHDIVLAVRTELESEIKKVN-FDLEVDRGRLT 182
++T C + E + I P D I K++ F + G +
Sbjct: 973 PCYLYFIQLTLQCPIPEEQNTRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVK 1032
Query: 183 VNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLWLRDNLEIDYLLL-- 240
V+L +L ++V+L QI +++ + + K L L D + +
Sbjct: 1033 VSL------ELAKERVILTSE-QIVCINGFLNYTFTNVLRLQKFLMLFDPDSTENCVFIV 1085
Query: 241 -----PASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIYNSVV 295
PA + IDW+ + + N +TM A + + + V
Sbjct: 1086 PTVKAPAGGKHIDWQFLELI----------QANGNTMPRAVPDEERQAQPFDPQRFQDAV 1135
Query: 296 CTP-----HSGQIYYITGVLGHLNANSLFTRNDGGAITYKKHYEERYGIQLCFDQELLLN 350
P Q +Y+ + HL+ S F ++ T+K +Y +YG+ + + LL+
Sbjct: 1136 VMPWYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLTIQNTSQPLLD 1193
Query: 351 -----GRRIFHAQNYLSK------CRQEKQREPSKISFE----LPPELCRIIMGPMSLST 395
R F Y+++ E+ + + + E L PELC + P SL
Sbjct: 1194 VDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL-- 1251
Query: 396 FYSFTFVPSIMHRLQSLLLAVNLKNML 422
+ + +P I++R+ LLLA +++ +
Sbjct: 1252 WRTAVCLPCILYRINGLLLADDIRKQV 1278
Score = 40.8 bits (94), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1715 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1771
Query: 673 LTDMRSASVNN 683
L+ +RS V N
Sbjct: 1772 LSHLRSKQVAN 1782
>sp|Q4WA22|DCL2_ASPFU Dicer-like protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=dcl2 PE=3 SV=2
Length = 1388
Score = 153 bits (387), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 198/426 (46%), Gaps = 62/426 (14%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTSKVLEA 440
E C I P +++ F F+ +I+ +L+ L+A L++ +L ++V+ T ++ A
Sbjct: 888 EACTIDRLPFTMAIFG--LFISAIVEQLEIELIATRLRDTIL----RDVSFKSTDHIITA 941
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I+T + + E LGDS LK++ S QLF + N HEG LS +D I+ N L K
Sbjct: 942 ISTPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAA 1001
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L +I T+ + W P L +E+ V ++++ +K +ADVVE
Sbjct: 1002 LDTGLDAYIVTKRLASRKWSAP-------------LISEKLGRVPAKRQMSTKVLADVVE 1048
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAERLVNVRHLESLLNYS 617
ALIGA GG + + R +++ V R ++ R + L+ + Y+
Sbjct: 1049 ALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMNDRLKDHIGYT 1108
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N GD+T ++
Sbjct: 1109 FEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIK 1168
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKWINITVDSFE---- 718
A VN + A ++ + + L +Q EL++++ +
Sbjct: 1169 HAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARD 1228
Query: 719 ---------RLSLEST------FGWE--SETSFPKALGDIIESLSGAIFVDSGCNK---E 758
R + S+ + W S + K DIIES+ GAIFVDSG N E
Sbjct: 1229 ASLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNLAPCE 1288
Query: 759 VVFESI 764
V E I
Sbjct: 1289 VFVEQI 1294
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 27/269 (10%)
Query: 493 NAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDN-SGSYELNDHSLFNERKIYVTGRKKVK 551
N L + DH G EPF + W++ N S S + + F R+ ++ R++
Sbjct: 811 NPLLMGVVRDHSRYG----EPFLFRKWLVSHQNPSCSIVELECAPFPHRRNFL--RRQTL 864
Query: 552 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD----FVNVPYERQFQVQAERLVNV 607
+ + DV EA+ + +DR+ + F++ E Q +++ L+
Sbjct: 865 ANSQVDVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLFISAIVE-QLEIE---LIAT 920
Query: 608 RHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 666
R +++L + SF+ ++ A+ S L YQR EFLGD++L + ++ L+ ++P
Sbjct: 921 RLRDTILRDVSFKSTDHIITAI---STPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHP 977
Query: 667 TLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW-INITVDSFERLSLEST 725
G L++ R V N A +++ GL +I+ KW + + R+ +
Sbjct: 978 NWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLGRVPAKRQ 1037
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSG 754
K L D++E+L GA +VD G
Sbjct: 1038 MS-------TKVLADVVEALIGAAYVDGG 1059
>sp|A2RAF3|DCL1_ASPNC Dicer-like protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl1 PE=3 SV=2
Length = 1525
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 197/438 (44%), Gaps = 58/438 (13%)
Query: 384 CRIIMGPMSLS-----TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVL 438
C I + P+ +S T +S P+I+ R+ + L+++ L N T+ L
Sbjct: 998 CFICIEPLKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLAL 1051
Query: 439 EAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
EA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 1052 EAFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYH 1111
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V + +I N L D ++ +IR+ F W G + DHS RK
Sbjct: 1112 VNRMCLICNKNLFNAAVDKEIYKYIRSRGFSRHTWYPEG--LKLLQGKDHS----RKATT 1165
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL---------------DRIGIKVDFV 589
+ + KT+ADV EALIGA L +GG + +R + F
Sbjct: 1166 ESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFY 1225
Query: 590 NVP-YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
+P Y+R+ AE ++ R +E L+Y FR P+LL A TH SY ++P CYQRLE
Sbjct: 1226 TIPKYQRRAADGAELYLS-RKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQRLE 1283
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
FLGD+++D + L+ ++P P LT+ + A V+N +VK GLH H+ + S L
Sbjct: 1284 FLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPL 1343
Query: 707 YKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV--- 760
I + + ES W PK L D++E+ GA+FVDS N EV+
Sbjct: 1344 QSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFEVIERF 1403
Query: 761 -FESIRPLLEPMITPETM 777
+ I+P E M +T
Sbjct: 1404 FRDYIKPFFEDMAIYDTF 1421
>sp|Q4WVE3|DCL1_ASPFU Dicer-like protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=dcl1 PE=3 SV=3
Length = 1537
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 230/531 (43%), Gaps = 82/531 (15%)
Query: 371 EPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 430
EP +IS LPP + +ST +F P+I+ RL S L+A+ + L +
Sbjct: 1013 EPLRIS-ALPPSI---------VSTCLAF---PAIISRLDSYLIALEACDEL------EL 1053
Query: 431 TIPTSKVLEAIT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQ 476
I LEA T + +E G + E LE LGD FLK A S LF
Sbjct: 1054 VIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNP 1113
Query: 477 NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL 536
N E V + +I N L ++ +IR+ F +W D DHS
Sbjct: 1114 NDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWY--PDGLTLLHGKDHST 1171
Query: 537 FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGG--------ENVGLIFLD----RIGI 584
K+ G+ + KT+ADV EALIGA L +GG +D R+
Sbjct: 1172 ----KLLSEGKHALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSC 1227
Query: 585 KVDFVNVPYERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YML 635
+++ + ++Q + R RH+E L Y F P LL A+TH S Y +
Sbjct: 1228 WKEYITLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRV 1287
Query: 636 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGL 695
P CYQRLEFLGD++LD + L+ ++P P L++ + A V+N SVK G
Sbjct: 1288 P----CYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGF 1343
Query: 696 HKHILHASQELYKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVD 752
H+ I+ S L I V+ E ES W PK L D++E+ GAIFVD
Sbjct: 1344 HRRIMAFSNPLQAQITHYVEEIETAQAESQGAVDYWVVAKDPPKCLPDMVEAYLGAIFVD 1403
Query: 753 SGCNKEVV---FE-SIRPLLEPMITPETM-RLQPAREL-----NEY-CQKHHFSMKKTVA 801
S + +V+ FE I+P E M +T P L NEY C ++ +K
Sbjct: 1404 SKFDFQVIEAFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCT--NYCLKAGEL 1461
Query: 802 PRINGK-AAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFPG 851
P I+G A V V +G + + + + AK AS++ L L P
Sbjct: 1462 PTIDGAPATVLAAVIVHGNVISEARSSSSR-YAKITASEKALAVLDGLLPS 1511
>sp|A1DE13|DCL1_NEOFI Dicer-like protein 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=dcl1 PE=3 SV=1
Length = 1538
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 228/520 (43%), Gaps = 73/520 (14%)
Query: 382 ELCRIIMGPMSL-STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEA 440
E RI P S+ ST +F P+I+ RL S L+A+ + L + I LEA
Sbjct: 1014 EPLRISAIPTSIVSTCLAF---PAIISRLDSYLIALEACDEL------ELVIRPDFALEA 1064
Query: 441 IT--TKKCQE------------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVK 486
T + +E G + E LE LGD FLK A S L+ + E V
Sbjct: 1065 FTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALYTQNPDDDEFDYHVN 1124
Query: 487 KDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTG 546
+ +I N L ++ +IR+ F +W D DHS +K+ G
Sbjct: 1125 RMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWY--PDGLTLLHGKDHS----KKLLSEG 1178
Query: 547 RKKVKSKTVADVVEALIGAFLSTGG-EN-------VGLIFLD----RIGIKVDFVNVPYE 594
+ + KT+ADV EALIGA L +GG EN +D R+ +++ +
Sbjct: 1179 KHALGEKTIADVCEALIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWKEYITLYTM 1238
Query: 595 RQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRL 645
++Q + R RH+E L Y F P LL A+TH S Y +P CYQRL
Sbjct: 1239 PKYQTEKPRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVP----CYQRL 1294
Query: 646 EFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQE 705
EFLGD++LD + L+ ++P P LT+ + A V+N SVK G H+ I+ S
Sbjct: 1295 EFLGDSLLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNP 1354
Query: 706 LYKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCN---KEV 759
L I V+ E ES W PK L D++E+ GAIFVDS + EV
Sbjct: 1355 LQAQITHYVEEIESAQAESRGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIEV 1414
Query: 760 VFE-SIRPLLEPMITPETM-RLQPAREL-----NEY-CQKHHFSMKKTVAPRINGK-AAV 810
FE I+P E M +T P L NEY C ++ +K P I+G A V
Sbjct: 1415 FFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCT--NYCLKAGELPTIDGAPAGV 1472
Query: 811 TVEVHANGTLFKHTHADADKETAKKVASKEVLKSLKASFP 850
V +G + + + + AK AS++ L L P
Sbjct: 1473 LAAVIVHGNVISEARSSSSR-YAKVKASEKALAVLDGLLP 1511
>sp|Q1DKI1|DCL1_COCIM Dicer-like protein 1 OS=Coccidioides immitis (strain RS) GN=DCL1 PE=3
SV=3
Length = 1500
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 186/409 (45%), Gaps = 68/409 (16%)
Query: 405 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSK--VLEAITTK-------KCQE------- 448
I+ R++S L+A L+ C Q + +P S LEA+T + Q+
Sbjct: 1005 IISRIESYLIA-------LEAC-QELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGM 1056
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G + E LE LGD FLK A S LF ++ E VK+ ++ N L K KL F
Sbjct: 1057 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYAF 1116
Query: 509 IRTEPFDPKMW--------MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
IR++ F + W G + G+ E N H+L + KT+ADV E
Sbjct: 1117 IRSQSFSRRGWYPGGLTLLQGKGQSKGATE-NKHALAD--------------KTIADVCE 1161
Query: 561 ALIGAFLSTGGEN----------VGLIFLDRIGI-----KVDFVNVPYERQFQVQAERLV 605
ALIGA +N L+ D + ++P + V A L
Sbjct: 1162 ALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSIPKYQTAVVDAAELD 1221
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 663
++ L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD ++Y+
Sbjct: 1222 LAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMACVEHIYH 1280
Query: 664 KYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLE 723
K+P P LT+ + A V+N +V+ GLH H+ H S L I V+ E LE
Sbjct: 1281 KHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELE 1340
Query: 724 ST---FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLE 769
S W + PK L D++E+ GAIF+DSG + EVV E + L+
Sbjct: 1341 SGDPPDAWTLTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLK 1389
>sp|A1D9Z6|DCL2_NEOFI Dicer-like protein 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=dcl2 PE=3 SV=1
Length = 1388
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 195/414 (47%), Gaps = 61/414 (14%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTSKVLEA 440
+ C I P +++ F F+ +I+ RL++ L+A L+ +L ++V T ++ A
Sbjct: 888 DACTIDRLPFTMAIF--GLFISAIVERLETELIATRLRETIL----RDVGFKSTDHIITA 941
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I+T + + E LGDS LK++ S QLF + N HEG LS + I+ N L K
Sbjct: 942 ISTPFAHALTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAA 1001
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L +I T+ + W P L +E+ V ++++ +K +ADVVE
Sbjct: 1002 LDTGLDAYIVTKRIASRKWSAP-------------LISEKLERVPAKRQMSTKVLADVVE 1048
Query: 561 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYE---RQFQVQAERLVNVRHLESLLNYS 617
ALIGA GG + R+ +++ V R ++ R + L+ + Y+
Sbjct: 1049 ALIGAAYMDGGHATAQACIRRLLPEINLHAVDTRTATRSVAPESARHMMNERLKDHIGYT 1108
Query: 618 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP-GDLTDM 676
F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N +P P GD+T +
Sbjct: 1109 FEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFN-HPIQRPQGDMTKI 1167
Query: 677 RSASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKW-------INITV 714
+ A VN + A ++ + L +Q EL+++ +N
Sbjct: 1168 KHAVVNANLLAFLCMESATSEEKLDVAQTSKDSFAVTTSQESVELWRFMRYRGQNLNAAR 1227
Query: 715 DS------FERLSLEST------FGWE--SETSFPKALGDIIESLSGAIFVDSG 754
D+ R + S+ + W S + K DI+ES+ GAIFVDSG
Sbjct: 1228 DASLARHRALRDEIASSLLHAPHYPWHALSRLNADKFFSDIVESVLGAIFVDSG 1281
>sp|A1CBC9|DCL1_ASPCL Dicer-like protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl1 PE=3 SV=2
Length = 1534
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 250/568 (44%), Gaps = 91/568 (16%)
Query: 342 CFDQELLLNGRRIFHAQNYLSKCRQEKQR---------EPSKISFELPPELCRIIMGPMS 392
C + +L + +N L K E+++ EP KIS +PP +
Sbjct: 972 CHWDQPVLQAELVRLRRNLLDKLTTEEKKIQTECFICAEPLKIS-AIPPSIA-------- 1022
Query: 393 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAIT--TKKCQE-- 448
ST +F P+I+ RL S L+++ + L ++ I + LEA+T + +E
Sbjct: 1023 -STCLAF---PAIITRLDSYLISIEACDEL------DLVIRSDYALEAVTKDSDNTEEHR 1072
Query: 449 ----------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
G + E LE LGD FLK A S LF + E V + +I N L
Sbjct: 1073 GQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFN 1132
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
++ +IR+ F +W D + DHS +K+ + + KT+ADV
Sbjct: 1133 TAKKRQIYRYIRSRSFSRHVWY--PDGLTLLQGKDHS----KKMLSQAKHALGEKTIADV 1186
Query: 559 VEALIGAFLSTGGE----NVGL----IFLDRIGIKV----DFVNVPYERQFQVQAERLVN 606
EALIGA L +GG ++G+ +F+D V +++ + +QV+
Sbjct: 1187 CEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAE 1246
Query: 607 VR---HLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRLEFLGDAVLDYLI 657
+E L Y FR P LL A+TH S + +P CYQRLEFLGD++LD +
Sbjct: 1247 TNLALQVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVP----CYQRLEFLGDSLLDMVC 1302
Query: 658 TVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSF 717
L++++P P LT+ + A V+N +VK G HKHI S L I V+
Sbjct: 1303 VEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYVEEI 1362
Query: 718 ERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV---FES-IRPLLEP 770
E ES W PK L D++E+ GAIFVDS + EV+ F++ I+P +
Sbjct: 1363 ETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQD 1422
Query: 771 MITPETM-RLQPA-----RELNEY-CQKHHFSMKKTVAPRING-KAAVTVEVHANGTLFK 822
M +T P R NE+ C ++ +K P I+G A V V + ++
Sbjct: 1423 MSIYDTFANKHPTTFLHNRLANEFGCT--NYCLKAGEMPAIDGMPAGVLAAVIVHNSVVS 1480
Query: 823 HTHADADKETAKKVASKEVLKSLKASFP 850
A + + AK AS+ L L P
Sbjct: 1481 EATASSSR-YAKIRASERALVVLDGLLP 1507
Score = 33.5 bits (75), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKR 31
FD HT+ ++QSRGRAR +S Y M+++
Sbjct: 553 FDLYHTLIQYVQSRGRARHYHSTYASMVEK 582
>sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl2 PE=3 SV=1
Length = 1377
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 191/419 (45%), Gaps = 70/419 (16%)
Query: 382 ELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEA 440
E C + P+S + F F+P I+ RL+S L+A L +L D ++ V+ A
Sbjct: 881 ESCTVDKLPVSTAIFG--LFIPHIVDRLESTLIANRLCATILCDVGFADI----QHVITA 934
Query: 441 ITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLG 500
I Q + + E LGDS LKY S QLF N EG L+ + I+ N L +
Sbjct: 935 IMAPSAQGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAA 994
Query: 501 CDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVE 560
D L FI T+ P+ W+ P L + R ++++ +K +ADV+E
Sbjct: 995 LDAGLDSFIITKALTPRRWIAP-------------LISTRVGAAPVKRQMSAKVLADVIE 1041
Query: 561 ALIGAFLSTGGENVGLI----FLDRIGIKVDFVNVPYERQFQVQAERLVNVRH-----LE 611
ALIGA GG + I FL + + +++P Q E RH L+
Sbjct: 1042 ALIGAAYLDGGHSKAQICTHCFLPEVNRQP--LDIP---SLITQTEHGRTARHIIDGDLQ 1096
Query: 612 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPG 671
L Y+F++ LL+EALTH S + + YQRLEFLGDA+LD +I ++ +SPG
Sbjct: 1097 RHLGYTFKNEDLLIEALTHPSCQHDQTTQSYQRLEFLGDAILDMVIVPIIFQYSNKISPG 1156
Query: 672 DLTDMRSASVNNDCYALSSVKHGLHKHILHASQ---------------ELYKWI------ 710
D+T ++ A VN + ++ + + + EL++++
Sbjct: 1157 DMTLIKHAVVNANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLD 1216
Query: 711 -----NITVDSFERLS---LES-----TFGWESETSF--PKALGDIIESLSGAIFVDSG 754
+ +D RL L S ++ W+S + K DI+ES+ GAI+VDSG
Sbjct: 1217 LQTSRDAALDRHRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSG 1275
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQR EFLGD++L Y+++ L+ + G LT+ R+ V N +++ GL I+
Sbjct: 946 YQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLDSFIIT 1005
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
+ +WI + + R+ K L D+IE+L GA ++D G +K
Sbjct: 1006 KALTPRRWIAPLIST--RVGAAPV----KRQMSAKVLADVIEALIGAAYLDGGHSK 1055
>sp|Q69KJ0|RTL3_ORYSJ Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica
GN=Os06g0358800 PE=2 SV=1
Length = 299
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 133/245 (54%), Gaps = 8/245 (3%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLITVYLYNK 664
V +ESLL Y FRD +L+ EALTHGS+ P P Y+RLE+LGDAVL +++ ++
Sbjct: 38 EVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLT 97
Query: 665 YPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLES 724
Y L PG LT +R+A+V+ + A +V HGLH + H + L I D E LS+
Sbjct: 98 YGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQIT---DFIEELSMYP 154
Query: 725 TFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQPARE 784
PK L D++ESL GAI+ DS N+E+V++ + L +P+I+ ET+ P E
Sbjct: 155 IHS-NGLLDPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSE 213
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L E+CQK +K + +TVEV +G + KE A+ A+K L
Sbjct: 214 LFEFCQKTRRGVKIV---KDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDK 270
Query: 845 LKASF 849
LK +
Sbjct: 271 LKETL 275
Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 449 GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGF 508
G E LE LGD+ L S+++F TY G L+ + + L ++ H L F
Sbjct: 72 GVTYERLEYLGDAVLTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHF 131
Query: 509 IRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAF 566
+R + P + D + + + S++ I+ G K + DVVE+LIGA
Sbjct: 132 LRHKA--PNL-----DGQITDFIEELSMY---PIHSNGLLD-PPKVLCDVVESLIGAI 178
>sp|A2R345|DCL21_ASPNC Dicer-like protein 2-1 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl2-1 PE=3 SV=2
Length = 1387
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 196/448 (43%), Gaps = 65/448 (14%)
Query: 352 RRIFHAQNYLSKCRQEKQREP---SKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHR 408
R + H Q +K Q P SKI L E C I P + + F F V I+ R
Sbjct: 854 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 908
Query: 409 LQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAA 467
L++ L+A L + +L D ++ ++ AIT Q + + E GDS LK+
Sbjct: 909 LEATLVATRLCETILRDLEFSSI----RHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 964
Query: 468 SQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSG 527
S QLF + N HEG LS +D I+ N+ L + D L FI + F P+ W P
Sbjct: 965 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 1019
Query: 528 SYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 587
L +E+ ++ + +K +ADVVEALIGA GG + R +V+
Sbjct: 1020 --------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVN 1071
Query: 588 FVNVPYERQFQVQ---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 644
N+ + +N HL + + Y+F + SLLVE+LTH S + YQR
Sbjct: 1072 LENIDRTTAPMPKDGVTNHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQR 1131
Query: 645 LEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH------ 698
LEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1132 LEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTNVQV 1191
Query: 699 ------ILHASQ---ELYKWI-----------NITVDSFERLSLESTFGWESETSFP--- 735
L+ S EL++++ ++ + L G + S+P
Sbjct: 1192 TPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYPWKS 1251
Query: 736 -------KALGDIIESLSGAIFVDSGCN 756
K DIIES+ GAIF+DS N
Sbjct: 1252 LSQLNADKFFSDIIESILGAIFIDSHGN 1279
>sp|Q0CEI2|DCL2_ASPTN Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl2 PE=3 SV=2
Length = 1377
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 195/426 (45%), Gaps = 60/426 (14%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 431
P+K +P C I P + + F F+ +I+ RL++ L+A L +L Q+V
Sbjct: 876 PAKARI-IPATACTIDRLPFTDTIFG--LFISAILDRLEATLIATRLCETIL----QDVQ 928
Query: 432 IPTSK-VLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRI 490
+++ V+ AI+ Q + E GDS LK+ S QL+ + N EG LS +D I
Sbjct: 929 FSSTRHVITAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEI 988
Query: 491 ISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKV 550
+ N L + D L FI T F P+ W P L +E+ + V G++ +
Sbjct: 989 VQNNRLARAALDVGLDAFILTRRFTPRKWTAP-------------LISEKAVEVAGKRPL 1035
Query: 551 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLVNVRHL 610
SK +ADVVE+LIGA GG+ + R+ +++ + A ++N L
Sbjct: 1036 SSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEICPI-TPPPVHESAPHVMN-DSL 1093
Query: 611 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSP 670
+ L Y+F + +LLVEALTH S + YQRLEFLGDAVLD ++ + +
Sbjct: 1094 KQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVHAMAHHAVECPQ 1153
Query: 671 GDLTDMRSASVNNDCYALSSVKHGLHKH-------------ILHASQ---ELYKWI---- 710
G++T ++ A N + A ++ + + L + Q EL++++
Sbjct: 1154 GEMTMIKHALTNANLLAFFCMEFVVAQEHTDVDAVPAAGGFALRSEQKPIELWRFMRSEA 1213
Query: 711 ---------------NITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
+ + L + + W+ S+ + K DI+ES+ GAIFVDS
Sbjct: 1214 LDLNNARETVLHRHSQLRAEIVHALHHGAQYPWQALSQLNADKFFSDIVESILGAIFVDS 1273
Query: 754 GCNKEV 759
+ +V
Sbjct: 1274 RGDLDV 1279
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQR EF GD+VL + ++ LY ++P G L++ R V N+ A +++ GL
Sbjct: 947 PTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAF 1006
Query: 699 ILHASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKE 758
IL KW T ++E G +S K L D++ESL GA ++D G K
Sbjct: 1007 ILTRRFTPRKW---TAPLISEKAVEVA-GKRPLSS--KVLADVVESLIGAAYMDGGQAK- 1059
Query: 759 VVFESIRPLLEPM----ITPETMRLQPARELNEYCQKH 792
IR LL + ITP + +N+ ++H
Sbjct: 1060 -AHTCIRRLLPEIEICPITPPPVHESAPHVMNDSLKQH 1096
>sp|Q2VF18|DCL2_CRYPA Dicer-like protein 2 OS=Cryphonectria parasitica GN=DCL-2 PE=3 SV=1
Length = 1451
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 219/517 (42%), Gaps = 92/517 (17%)
Query: 401 FVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLG 459
+PS++ + L+A L + +L + NV++ ++EAI K + + E +E LG
Sbjct: 954 LMPSLVCYTELYLVAAELSRKVLAPLRISNVSM----LVEAICAKSARTPENYERIEFLG 1009
Query: 460 DSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMW 519
DS LK + L T + EG+LS+ KDR++SNA LC+ CD +L F+ T+ K W
Sbjct: 1010 DSILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDAELDQFLVTQQLVTKGW 1069
Query: 520 MIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 579
P ++D + ++ ++ + KT+ADVVEALIG GG L +
Sbjct: 1070 QPP-------YMSDLAKQDQEP---ESKRILSPKTLADVVEALIGVSFVDGGLPKALECI 1119
Query: 580 DRIGIKVDFVNVPYERQFQVQAERL------------VNVRHLESLLNYSFRDPSLLVEA 627
R+ F+ R F + L +++ LE L+ YSF + +LLVEA
Sbjct: 1120 -RL-----FIPESQPRPFSEVRDILFGAAEPKGMKLPADLQLLEQLIEYSFCEKALLVEA 1173
Query: 628 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYA 687
+TH SY + CY RLEF+GDA+LDY+I ++ P L + +R+A VN D
Sbjct: 1174 VTHPSYNVSGTVACYDRLEFIGDAILDYIIVEEVFALEPALENWQMHLLRTALVNADILG 1233
Query: 688 L-----------------------------------------SSVKHGLHKHILHASQEL 706
+ V L + +S EL
Sbjct: 1234 FLIMEWSYKQMGFEVCRANEGDSDSKSSGDSTSDKASPRLEQTEVPIPLWSFMRQSSAEL 1293
Query: 707 YKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSGAIFVDSG-- 754
IT FE L S T +P AL D E+L GAI+VD+G
Sbjct: 1294 TMEREITKARFEELRDPILEAMRSGTHYPWALFARLHAQKFYSDFFEALVGAIWVDAGPG 1353
Query: 755 ---CNKEVVFESIRPLLEPMITPETMRLQPARELNEYC--QKHHFSMKKTVAPRINGKAA 809
C V + P L+ ++ + L P EL ++ + +K+T+ +GK
Sbjct: 1354 FDACRAFVARSGVLPYLKRLLRDQVHVLHPKEELGRLAGRERVEYVVKETLKDDGDGKEW 1413
Query: 810 VTVEVHANGTLFKHTHADADKETAKKVASKEVLKSLK 846
EV G KE ++ A+ + + LK
Sbjct: 1414 -ACEVRVGGRYVTDVTGCLFKEESRVKAATQACEILK 1449
>sp|Q0UI93|DCL1_PHANO Dicer-like protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL1 PE=3 SV=2
Length = 1522
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 192/774 (24%), Positives = 316/774 (40%), Gaps = 97/774 (12%)
Query: 47 ICTLYLPNNCPIQTVIAQG-NIKTL-KQTACLEACKKLHQIGALTDNLLPDV---VVEEH 101
+C + LP +CPI +++ Q + KT+ K +A + C +L + L + LLP + +
Sbjct: 643 VCEVILPEHCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLPTISKYLPAMR 702
Query: 102 DAQKHGNEPYDAEHPIYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRT 161
+A +E + + P Q + H +I+ + D P + + R
Sbjct: 703 NALLAVSEKKKGNYAMVIKPTFWKQDRDTVPESLHLTIIDADRGL--DRPHQPLAMLTRR 760
Query: 162 ELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLN 221
++ L R V+ I LTP+ + + RF + +F
Sbjct: 761 PF-PQLPSFPIYLTDCRPSNIVSQSLHIPISLTPELLEMFTRFTLRIF-----------E 808
Query: 222 EILKGLWLRDNLEIDYLLLPASEQSIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTK 281
+I ++ D ++ Y +LP E + V S+S P ++ + N +
Sbjct: 809 DIYNKVYDYDVSKMSYWMLPVIEHRV--ASVRSMSNPQEV--LDMDQIRKVYNEPFWKWS 864
Query: 282 SGPLCTCMIYNSVVCTPHSGQIYYITGVLGHLN-----------ANSLFTRN--DGGAIT 328
+I V + G+ YY + HL N F +N D
Sbjct: 865 PQSRTDDLIDRYFVDPMNGGRRYYSDRLAPHLKPQDPVPANVPRQNHKFMKNILDFSDSK 924
Query: 329 YKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKISFELPPELCRIIM 388
+ K + I + +L +I +N+L+ ++++E + + + PE I
Sbjct: 925 WMKSRD----ITRWHQDQPVLQVEKIPFRRNHLANVEDKEKKELANLETYICPEPLHI-- 978
Query: 389 GPMSLST-FYSFTFV-PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTK-- 444
+L+T F +V P+I+HR +S L+A++ ++L ++ + + LEA+T
Sbjct: 979 --SNLATPFVVMCYVLPAIIHRFESYLIALDACDVL------DLKVSPALALEALTKDSD 1030
Query: 445 ------------KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIIS 492
K G + E LE LGD FLK A S +F +E V++ ++
Sbjct: 1031 NSEEHGEEKINFKSGMGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLC 1090
Query: 493 NAALCKLGC-DHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVK 551
N L + KL ++RT+ F + W G L L + ++ +
Sbjct: 1091 NQNLMETAVGKKKLYKYVRTDAFSRRNWY----PEGLKLLRGKGLKKTEEDWLNVTHNLG 1146
Query: 552 SKTVADVVEALIGA-FLS--TGG--------ENVGLIFL-----DRIGIK-VDFVNVPYE 594
K+VADV EA IGA F+ GG E V + L D + K D+ +
Sbjct: 1147 DKSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLMEKWTDYYAAYTK 1206
Query: 595 RQFQ---VQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLG 649
++Q A +L +E Y FR P LL A H S +M IP YQRLEFLG
Sbjct: 1207 PKYQTAGATATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPSQPFMWENIP-SYQRLEFLG 1265
Query: 650 DAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKW 709
D++LD ++L+ KYP P LT+ ++ V+N VK G H H+ + L
Sbjct: 1266 DSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHMKQNTAILSSQ 1325
Query: 710 INITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
I V E E+ W S + PK L D+IE+ AIFVDS + VV
Sbjct: 1326 IRDYVYEVEEAEREANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDFNVV 1379
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLK 30
FD T+ ++QSRGRAR +NS YL ML+
Sbjct: 504 FDLYRTMIGYVQSRGRARHRNSKYLHMLE 532
>sp|P0C5H7|DCL2_EMENI Dicer-like protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=dcl2 PE=3 SV=1
Length = 1429
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 202/490 (41%), Gaps = 89/490 (18%)
Query: 336 RYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQRE---------------PSKISFELP 380
RYG L F + L +G Y SK R QR+ P+K L
Sbjct: 783 RYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQRQTLAKKRPAEDEILGSPTKKRI-LS 841
Query: 381 PELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTSKVLE 439
C I P S + F F +P I+ RL++ L+A L + +L D Q++ V+
Sbjct: 842 ASHCTIDRLPASETVFGRF--IPVILDRLEAALVATRLCETVLRDIQFQDL----RHVIT 895
Query: 440 AITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKL 499
AIT Q + E GDS LK+ + LF N HEG L+ ++ NA L +
Sbjct: 896 AITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRA 955
Query: 500 GCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVV 559
D L +I + F P+ W P L +E+ + + +K +ADVV
Sbjct: 956 ALDQGLDAYIISNRFTPRKWSAP-------------LISEKLYASASTRSMSAKVLADVV 1002
Query: 560 EALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYERQFQVQAER--LVNVRHLESL 613
EALIGA GG ++ + FL I + + P ++ L+ +LE+
Sbjct: 1003 EALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPMSKDHKKPHLIQQENLENH 1062
Query: 614 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDL 673
+ Y+F+D +LL+EALTH S + YQRLEFLGDAVLD LI + + G++
Sbjct: 1063 IGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEM 1122
Query: 674 TDMRSASVNNDCYAL--------------SSVKHGLHKHILHASQ-----ELYKWINITV 714
T ++ A VN A S+ G S LY ++ +
Sbjct: 1123 TKIKHAIVNGHLLAFLCMQFKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRYSP 1182
Query: 715 DSFERLSLESTFG------------------WESETSFPKAL----------GDIIESLS 746
L +E G + T++P +L D++ES+
Sbjct: 1183 SRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVESII 1242
Query: 747 GAIFVDSGCN 756
GAIFVDSG +
Sbjct: 1243 GAIFVDSGGD 1252
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 604 LVNVRHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 662
LV R E++L + F+D ++ A+T L + P YQR EF GD+VL + + L+
Sbjct: 872 LVATRLCETVLRDIQFQDLRHVITAIT---MPLAQAPTDYQRYEFFGDSVLKFTVAASLF 928
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
P G LT+ A V N +++ GL +I+ KW + E+L
Sbjct: 929 YNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRKWSAPLIS--EKLYA 986
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCNK 757
++ + + K L D++E+L GA ++D G +K
Sbjct: 987 SAS----TRSMSAKVLADVVEALIGAAYIDGGLHK 1017
>sp|Q0UL22|DCL2_PHANO Dicer-like protein 2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL2 PE=3 SV=2
Length = 1399
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 189/414 (45%), Gaps = 57/414 (13%)
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV 437
E+ + C + P S F +PSI+HR ++A L+ LL V + ++
Sbjct: 875 EMAAKDCIVDPVPAPYSVFA--LLLPSILHRFGMAIIAETLRTTLLG----PVALDSAHS 928
Query: 438 L---EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNA 494
L A+ + + + LE LGD LK+ A+ L E L+ KK RI+SN
Sbjct: 929 LLLTRALKSSAADGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNG 988
Query: 495 ALCKLGCDHKLPGFIRTEPFDPKMWM--IPGDNSGSYELNDHSLFNERKIYVTGRKKVKS 552
L + L F+ T+ F W GD L E V +++ S
Sbjct: 989 FLARATIAAGLDRFMITKSFTGAKWAPRYAGD-----------LLAETGPAV--KEERSS 1035
Query: 553 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAE----RLVNVR 608
K +AD++E+LIGA + GG ++ + + +++VP +A L+ +
Sbjct: 1036 KLIADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANSILHEAAPAEADLMGLD 1095
Query: 609 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTL 668
LE+L+ Y+F+ LL+EALTH S+ P + Y+RLEFLGDAVLDY+I+ L+ P L
Sbjct: 1096 VLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPEL 1155
Query: 669 SPGDLTDMRSASVNNDCYALSSVKHGLHKHILHA------SQELYKW---------INIT 713
S + +R+A+VN A + + + ++ SQ+ W +N
Sbjct: 1156 SHQKMHAIRTATVNASFLAFRLFETTIDEETINKTSMRPESQKRAIWQFLRSGSPSLNAN 1215
Query: 714 VDSFER------------LSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
D+ R L+ + F W + T PK L D++ES+ GA+++DS
Sbjct: 1216 RDNALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDS 1269
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD +L ++ TV+L P LT + V+N A +++ GL + ++
Sbjct: 946 YQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMIT 1005
Query: 702 ASQELYKWINITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVV- 760
S KW L T E K + DIIESL GA + G K V+
Sbjct: 1006 KSFTGAKWAPRYAGDL----LAETGPAVKEERSSKLIADIIESLIGACYTVGGFEKAVLC 1061
Query: 761 FESIRPLLEPMIT 773
+++ P LEP I+
Sbjct: 1062 VQTLLP-LEPWIS 1073
>sp|Q2U6C4|DCL1_ASPOR Dicer-like protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl1 PE=3 SV=2
Length = 1523
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 182/417 (43%), Gaps = 54/417 (12%)
Query: 384 CRIIMGPMSLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTSKV 437
C + + P+ +S S P+I++RL + L+A L+ C ++++
Sbjct: 996 CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIA-------LEGCKTLDLSVKPEYA 1048
Query: 438 LEAITTK-------KCQE-------GFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLL 483
LEA T + Q+ G + E LE LGD FLK A S LF + E
Sbjct: 1049 LEAFTKDSDNTEEHRVQQIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDF 1108
Query: 484 SVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIY 543
V + +I N L +L + R+ F W D DH +KI
Sbjct: 1109 HVNRMCLICNKNLFNTALKKELYQYTRSRGFSRHTWY--PDGLTLLHGRDH----RKKIS 1162
Query: 544 VTGRKKVKSKTVADVVEALIGAFLSTGG-ENVGLIFLDRIGIKVDFVN------VPYER- 595
+ ++ KTVADV EALIGA L +GG N + + + VD N Y
Sbjct: 1163 AESKHALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSS 1222
Query: 596 ----QFQVQAERLVNV---RHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 646
++Q Q+ + R +E L Y F+ P LL A TH SY ++P CYQRLE
Sbjct: 1223 YMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVP-CYQRLE 1281
Query: 647 FLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL 706
FLGD++LD + L+ +YP P LT+ + A V+N +VK GLH H+ H S L
Sbjct: 1282 FLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHFSNPL 1341
Query: 707 YKWINITVDSFERLSLESTFG---WESETSFPKALGDIIESLSGAIFVDSGCNKEVV 760
I + + ES W PK L D++E+ GA FVDS VV
Sbjct: 1342 QSQITHYAEEIQAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRVV 1398
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 2 FDPSHTVCSFIQSRGRARMQNSDYLLMLKRY 32
FD +T+ ++QSRGRAR +S Y M++RY
Sbjct: 545 FDLYNTLIQYVQSRGRARHSSSTYASMIERY 575
>sp|Q1DW80|DCL2_COCIM Dicer-like protein 2 OS=Coccidioides immitis (strain RS) GN=DCL2 PE=3
SV=3
Length = 1435
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 183/420 (43%), Gaps = 66/420 (15%)
Query: 380 PPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSKVL 438
P C + P+ S F F+P ++H +++ +A L +L N+++ VL
Sbjct: 923 PANNCSVDRLPVEYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VL 976
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
AI++ +E + + LE LGDS LK S QL + EG L+++K I+SN L
Sbjct: 977 TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLAN 1036
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADV 558
L FI T+PF W P N+ D + +++ +K +ADV
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWR-PSYNTDHINTGDMT---------EPTREMSTKVLADV 1086
Query: 559 VEALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYERQFQVQAERLVNVRHLES 612
VEALIGA GGEN L IF+ I + VN+ + ++ E + +E
Sbjct: 1087 VEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQEDSFSDENNNMLSEIEG 1146
Query: 613 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGD 672
L+ Y+F+ LL+ A+TH S YQRLEF+GD++LD ++ L+ D
Sbjct: 1147 LVGYTFKKKPLLLAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRCFHHFD 1204
Query: 673 LTDMRSASVNND----------------------------------CYALSSVKHGLHKH 698
+ MR+A VN D Y +KH
Sbjct: 1205 MHLMRTALVNADFLAFLCMNAYREEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWD 1264
Query: 699 ILHASQEL---YKWINITVDSFERLSLESTFGWE--SETSFPKALGDIIESLSGAIFVDS 753
I++A Q Y+ ++ +D E+L T+ W K DI+ES+ GAIF+DS
Sbjct: 1265 IVNAQQRAAKQYEKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 642 YQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILH 701
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFILT 1049
Query: 702 ASQELYKW--------INITVDSFERLSLESTFGWESETSFPKALGDIIESLSGAIFVDS 753
KW IN T D E ST K L D++E+L GA +D
Sbjct: 1050 KPFTGAKWRPSYNTDHIN-TGDMTEPTREMST----------KVLADVVEALIGAANIDG 1098
Query: 754 GCNK 757
G NK
Sbjct: 1099 GENK 1102
>sp|Q0CW42|DCL1_ASPTN Dicer-like protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl1 PE=3 SV=2
Length = 1519
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 182/401 (45%), Gaps = 40/401 (9%)
Query: 403 PSIMHRLQSLLLAVNLKNML-----LDHCMQNVTIPTSKVLEAITTKKCQE---GFHLES 454
P+I+ RL + L+ + L L++ ++ +T + E + + + G + E
Sbjct: 1014 PAIISRLDAYLIGLEACKKLGLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMGKNYER 1073
Query: 455 LETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPF 514
LE LGD FLK A S LF + + +E V + +I N L +L FIR+ F
Sbjct: 1074 LEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFIRSRGF 1133
Query: 515 DPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE-- 572
W G + DHS +KI + + KT+ADV EALIGA L T G
Sbjct: 1134 SRDTWYPEG--LTLLQGRDHS----KKIGSESKHALAEKTIADVCEALIGAALLTPGPQH 1187
Query: 573 --NVGLIFLDRI--------GIKVDFVNVPYERQFQVQAERLVNV---RHLESLLNYSFR 619
++G+ + + D++++ ++Q QA + R +E L Y FR
Sbjct: 1188 RFDMGVRAVSAVVDSNEHNAASWRDYISLYSIPKYQEQAPDGSEIDLCRRVEEKLGYHFR 1247
Query: 620 DPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMR 677
P LL A TH SY +P CYQ LEFLGDA+LD + L+ ++P P LT+ +
Sbjct: 1248 YPRLLHSAFTHPSYPSAWARVP-CYQSLEFLGDALLDMVCVEDLFRRFPDRDPQWLTEHK 1306
Query: 678 SASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLESTFG---WESETSF 734
A V+N +VK GLH H+ + S L I + + + +S W
Sbjct: 1307 MAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHYAEEAQAAASQSDVAVDYWTLTQDP 1366
Query: 735 PKA-LGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITP 774
PK L D++E+ GA+FVDS FE + + I P
Sbjct: 1367 PKVCLPDMVEAYLGAVFVDSNFR----FEEVEVFFQQHIKP 1403
>sp|A4RKC3|DCL1_MAGO7 Dicer-like protein 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=DCL1 PE=3 SV=2
Length = 1591
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 187/437 (42%), Gaps = 79/437 (18%)
Query: 381 PELCRIIMGPMSLS------TFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIP 433
P+ C +++ + +S ++TF P+I++RL++ L+++ +N+ LD + I
Sbjct: 998 PQTCYLVLETLLISQIPVDTVVMAYTF-PAIIYRLENSLISLEACQNLGLDIPIDIALIA 1056
Query: 434 TSKVL-------EAITTKKCQEGFHLESLETLGDSFLKYAASQQLF-----KTYQNHHEG 481
+K EA + G + E LE LGD FLK A S L+ ++ H E
Sbjct: 1057 MTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEGDEFEYHVER 1116
Query: 482 LLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERK 541
+L I N L + L IR++ F+ + W PG L +K
Sbjct: 1117 MLD------ICNKNLLNWALESNLQEHIRSKSFNRRTWYPPG----------LKLLKGKK 1160
Query: 542 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-PYERQFQVQ 600
V + K++ADV EALIGA T F + V V V + + +Q
Sbjct: 1161 TEVDDEHALGDKSIADVCEALIGAAYLTAQAQSSPNF----DLAVKAVTVMTHSKTHTMQ 1216
Query: 601 A--------------------ERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEI 638
A +L +++ + Y F++P LL A H SY I
Sbjct: 1217 AWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENI 1276
Query: 639 PRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKH 698
P YQRLEFLGD++LD + YL+ K+P P LT+ + A V+N + +V G H+H
Sbjct: 1277 P-SYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRH 1335
Query: 699 ILHASQEL----YKWINITVDSFE--------RLSLESTFG---WESETSFPKALGDIIE 743
++H L +W + E R E + W PK L DI+E
Sbjct: 1336 LIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCLPDILE 1395
Query: 744 SLSGAIFVDSGCNKEVV 760
+ GA+FVD+G + V
Sbjct: 1396 AYVGALFVDTGYDYSAV 1412
>sp|Q6ATG6|RTL2_ORYSJ Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica
GN=Os05g0271300 PE=2 SV=2
Length = 317
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 9/197 (4%)
Query: 601 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 660
A+R +E LL Y FRD LL EALTH S+ + YQRLEF+GD+ L + +
Sbjct: 31 ADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNF 88
Query: 661 LYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFER- 719
LY PTL PG L+ +R+A+++ + A +V+H L+ + L + +++ ++
Sbjct: 89 LYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQE 148
Query: 720 ----LSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPE 775
LS G S PK L DI+E+++ A++VD + E +++ R L EP+IT E
Sbjct: 149 PEDDLSTVPYGG--SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE 206
Query: 776 TMRLQPARELNEYCQKH 792
T+ QP L+E CQKH
Sbjct: 207 TIDEQPVTMLHELCQKH 223
>sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl2-2 PE=3 SV=2
Length = 1362
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 198/442 (44%), Gaps = 77/442 (17%)
Query: 401 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKV-LEAI----TTKKCQEGFHLESL 455
F PSI H ++ ++A L+ L +++VT P ++ L AI T+ + + F L L
Sbjct: 875 FTPSISHEVEVYMIAQILRQEL---SLRSVT-PWQRIDLLAIAIRPTSIEHRATFRL--L 928
Query: 456 ETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFD 515
+GD+F+KY + QLF + HEGLLS K R +S+A L L F+ ++ +
Sbjct: 929 AFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLN 988
Query: 516 PKMWMIP---GDNSGSYELNDHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 572
K W+ P G S NE + ++ + + T+AD+ +A++GA + GG
Sbjct: 989 GKRWVPPLVSGIEPAS---------NEAR-----QRSIGAATLADMTKAVVGAAFTDGGL 1034
Query: 573 NVGLIFLDRIGIKVDFVNVP------YERQFQVQAERLVNVRHLESLLNYSFRDPSLLVE 626
N + K+ N Y + A + +E LL Y+F D SL VE
Sbjct: 1035 NQAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVE 1094
Query: 627 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCY 686
++TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 1095 SMTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFL 1154
Query: 687 ALSSV---------------KHGLHKHILHASQELYKWINITVDS-------FERLSLES 724
++ +H +HK++ S L+ ++ + D+ F + S E
Sbjct: 1155 TFIAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEK 1214
Query: 725 TFG-----WESETSFP----KALG------DIIESLSGAIFVDS-----GCNKEVVFESI 764
WE + +P +ALG DII+S+ GA+F+DS C+ I
Sbjct: 1215 ADAIKHELWE-QRFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGI 1273
Query: 765 RPLLEPMITPETMRLQPARELN 786
PLLE I+ + P L
Sbjct: 1274 VPLLEHFISHQITTDHPKDTLQ 1295
>sp|Q7S8J7|DCL1_NEUCR Dicer-like protein 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dcl-1
PE=2 SV=1
Length = 1584
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 189/431 (43%), Gaps = 59/431 (13%)
Query: 378 ELPPELCRIIMGPMSLSTFYSFTFV-----PSIMHRLQSLLLAVNLKNML-----LDHCM 427
++ P+ C +I+ PM +S + PSI+HR++S L+A++ +L D +
Sbjct: 1011 DVEPQQCFLILEPMRISPIPADVVAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLAL 1070
Query: 428 QNVTIPTSKVLEAITTK---KCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLS 484
+ T + E K + G + E LE LGDSFLK A + ++ + E
Sbjct: 1071 EAFTKDSDNSDEHDAEKENFQTGMGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYH 1130
Query: 485 VKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYV 544
V++ +I N L + L +IR+ F+ + W G L + R+ +V
Sbjct: 1131 VERMLLICNKNLFNNALEIGLEEYIRSMSFNRRQWYPEG-----LILKKGKSKDARQRHV 1185
Query: 545 TGRKKVKSKTVADVVEALIGAFLSTGGEN---------VGLIFLD---RIGIKVDFVNVP 592
+ K++ADV EALIGA TG E V + D R+ D+ V
Sbjct: 1186 -----LADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVKDKKHRMISYGDYYAVY 1240
Query: 593 YERQFQVQAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEF 647
+ +Q ++ + + Y F+ P LL A H +Y + +P YQRLEF
Sbjct: 1241 QKPTWQTESANSAQRDMAKKFSERMGYKFKHPRLLRAAFQHPTYPSLYERLP-SYQRLEF 1299
Query: 648 LGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHAS---- 703
LGDA+ D + YL+ K+P P LT+ + A V+N S G +K I S
Sbjct: 1300 LGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSFHLGFNKCIATMSPSIL 1359
Query: 704 QELYKWINITVDSFERLSLESTFGWESETSF--------------PKALGDIIESLSGAI 749
+++ +++ ++ E E+ ++ + PK L D++E+ GAI
Sbjct: 1360 KDIAEYVTEIEEALETAKQEAINAGKTADEYSRDYWVHITHASRLPKCLSDVVEAYIGAI 1419
Query: 750 FVDSGCNKEVV 760
FVDS + VV
Sbjct: 1420 FVDSEYDYSVV 1430
>sp|Q9LTQ0|RTL2_ARATH Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1
SV=1
Length = 391
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 136/246 (55%), Gaps = 16/246 (6%)
Query: 610 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLS 669
+E +LNY F + SLL EA+TH S + P Y+RLEF+GD+ + I+ YLY YP+L
Sbjct: 63 VEKILNYKFSNKSLLKEAITHTS--CTDFP-SYERLEFIGDSAIGLAISNYLYLTYPSLE 119
Query: 670 PGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQEL---YKWINITVDSFERLSLESTF 726
P DL+ +R+A+V+ + A S+ HGL+ + + L K + V + LS+ ++
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSV--SY 177
Query: 727 GWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL--QPARE 784
G PK L D+ ESL+GA++VD + + ++ R LLEP++T + ++ QP
Sbjct: 178 G--GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSM 235
Query: 785 LNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKVASKEVLKS 844
L + C KH + + +G ++ V ++ + L A+ +K+ A+ +A+KE L+
Sbjct: 236 LFKLCHKH--KKRIDIKNWKDGNVSIAV-IYLDDELLASGRAE-NKDIARLIAAKEALRK 291
Query: 845 LKASFP 850
L FP
Sbjct: 292 LSEVFP 297
Score = 40.4 bits (93), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 439 EAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDRIISNAALCK 498
EAIT C + E LE +GDS + A S L+ TY + LS+ + +S L +
Sbjct: 79 EAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLAR 138
Query: 499 LGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGRKKVKS-KTVAD 557
+ +H L F+R P + E ++ ++ E + V+ VK+ K +AD
Sbjct: 139 VSLNHGLYSFLRRN--------APSLDEKVKEFSE-AVGKEDDLSVSYGGLVKAPKVLAD 189
Query: 558 VVEALIGA 565
+ E+L GA
Sbjct: 190 LFESLAGA 197
>sp|A4RHU9|DCL2_MAGO7 Dicer-like protein 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=DCL2 PE=3 SV=3
Length = 1485
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 201/496 (40%), Gaps = 95/496 (19%)
Query: 372 PSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNL--KNMLLDHCMQN 429
P + + +P +LC P +L VPSI ++ +A L + L ++
Sbjct: 947 PRRFDYIIPEQLCTFDTVPATLVQL--GMLVPSITQAMEPYFVAQELLRRTALGSLDFKD 1004
Query: 430 VTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQNHHEGLLSVKKDR 489
+ + V+ IT+ + E +E LGD+ LK A+ + EG LS+ KDR
Sbjct: 1005 IDL----VMMVITSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFPEGYLSLLKDR 1060
Query: 490 IISNAALCKLGCDHKLPGFIRTEPFDPKMW--MIPGDNSGSYELNDHSLFNERKIYVTGR 547
++SN+ LCK L FI T + K W M+ T
Sbjct: 1061 LVSNSRLCKAATALGLDQFIITRQYSLKQWRNMLTAPEPP-----------------TNT 1103
Query: 548 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQFQVQAERLV-- 605
+K+ SKT+ADV EALIGA GG + L + + +P ER + R V
Sbjct: 1104 RKMSSKTLADVTEALIGAAYIEGGMSKALRCISLM--------IPNERWRSLDESRAVLY 1155
Query: 606 -----------NVRHLESLLNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLGDAVL 653
+ LE LL YSF SLL+EA+TH SY +P +RLEFLGD+VL
Sbjct: 1156 QVALNDIPLPSTLGPLEELLGYSFNKKSLLIEAITHASYNIPGSAGSSLERLEFLGDSVL 1215
Query: 654 DYLITVYLYN-KYPT-LSPGDLTDMRSASVNNDCYALSSVKH------------------ 693
D+++ L++ K P + ++ +R+A VN + +++
Sbjct: 1216 DFVVVARLFSVKDPAPIEHYNMHLLRTAVVNGEFLGFLAMEWRTAATQRSVVVRTGQGTA 1275
Query: 694 --------------GLHKHILHA----SQELYKWINITVDSFERLSLE--STFGWE--SE 731
G +H Q+L + + + R +LE + W+ +
Sbjct: 1276 DELETVETPGLPLFGFLRHNASGDWVRDQQLAEERHAEMAPGIRDALEHGQRYPWDLLAR 1335
Query: 732 TSFPKALGDIIESLSGAIFVDSG----CNKEVVFESIRPLLEPMITPETMRLQPARELNE 787
K D++E++ GA++VDSG C K + I L+ + L P EL
Sbjct: 1336 LRISKVHSDVLEAVIGAVWVDSGSLEECEKLIERVGILRYLDRALRDGVKILHPKEELGR 1395
Query: 788 YCQKHHFSMKKTVAPR 803
Q + K A R
Sbjct: 1396 VAQNNKVVYKVDKAKR 1411
>sp|Q9FKF0|RTL3_ARATH Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2
SV=1
Length = 957
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 9/176 (5%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E +LNYSF + +LL EA+T S + + RLEF GD++L+ T Y+ + Y
Sbjct: 3 SVEAVEKILNYSFVNKTLLKEAITQKSPL-------FDRLEFFGDSILEVAFTNYICHTY 55
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L +L D+R+A+V+N+ +A +V H LH +L + L+K + ++ +
Sbjct: 56 PNLKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVP 115
Query: 726 FGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRLQP 781
+G PK L D +ES++ +F+D + + ++E R LLEP+ TP+ + LQP
Sbjct: 116 YG--GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQP 169
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 32/256 (12%)
Query: 606 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 665
+V +E +LNYSF + +LL E LTH + L +Q L F+G++ L T +LY Y
Sbjct: 414 SVEAVEKILNYSFVNKTLLKELLTHNNSPL------FQGLMFVGESALSLAFTKHLYLTY 467
Query: 666 PTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSLEST 725
P L P DL+ +R A+ +D YA +VK G+++ + + + K +T D E +
Sbjct: 468 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGS---VPKPEKMTTDFIELM----- 519
Query: 726 FGWESE----TSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPETMRL-- 779
G E + PK L +++ ++GA+++D N + + E R LLEP+ T + +R+
Sbjct: 520 -GKEDDPYRVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQL 578
Query: 780 -QPARELNEYCQKH----HFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
QP L KH F K R N +V+ + +F + +TAK
Sbjct: 579 KQPFLMLFRLADKHGKQIDFRYSKDGGSRKN-----IAQVYMDD-MFIASGCAKRIDTAK 632
Query: 835 KVASKEVLKSLKASFP 850
+A++E ++ L P
Sbjct: 633 LLAAEEAIQKLSECMP 648
>sp|Q2VF19|DCL1_CRYPA Dicer-like protein 1 OS=Cryphonectria parasitica GN=DCL-1 PE=3 SV=1
Length = 1548
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 177/442 (40%), Gaps = 82/442 (18%)
Query: 383 LCRIIMGPMSLS-----TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTSK 436
C ++ PM +S +PSI+HR++ L+A LD C + + I
Sbjct: 994 FCYFVLEPMRISPLPVDVVAMAYLLPSIIHRIEQNLIA-------LDACRLLQLDIHPDL 1046
Query: 437 VLEAITTKKCQEG---------------------FHLESLETLGDSFLKYAASQQLFKTY 475
LEA+T +G + E LE LGDSFLK A + +F
Sbjct: 1047 ALEALTKDSDNQGEDERMDSIQAFEPVNFQPGMGANYERLELLGDSFLKMATTIAVFTLI 1106
Query: 476 QNHHEGLLSVKKDRIISNAALCKLGC--DHKLPGFIRTEPFDPKMWM-IPGDNSGSYELN 532
N E ++ +I N L + D KL +IR++ F+ W + G L
Sbjct: 1107 PNKDEFDYHCERMVMICNQNLFGVAKSDDLKLHEYIRSKSFERGTWYPVLKLEFGKTHLK 1166
Query: 533 DHSLFNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN-- 590
+E ++ K++ADV EALIGA T ++ R ++ VN
Sbjct: 1167 TLKQMDEHRL--------ADKSIADVCEALIGAAYMTTRKHDDYDLAVRAVTRL--VNHK 1216
Query: 591 ---------------VPYERQFQVQAERLVNVRHLESLLNYSFRDPSLLVEALTHGS--Y 633
+P + A L + + Y F+ P +L A H S Y
Sbjct: 1217 QHPMTKWDDYHAAYVMPGWQTMPANAAELDMAQKIHEATGYQFKHPRVLRSAFRHPSRPY 1276
Query: 634 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKH 693
+ ++P YQRLEFLGDA+ D YL++ P P LT+ + A V+N +V
Sbjct: 1277 VFDKVPH-YQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSL 1335
Query: 694 GLHKHILH----ASQELYKWIN-ITVDSFERLSLESTFG----------WESETSFPKAL 738
G HK ILH ++++++ IT G W PK +
Sbjct: 1336 GFHKFILHHHASIGSQIHEYVTEITEARRAAEDAAEAAGKPRSAYSRDYWVEAPQPPKCI 1395
Query: 739 GDIIESLSGAIFVDSGCNKEVV 760
D++E+ GAIFVDS + VV
Sbjct: 1396 PDVLEAYVGAIFVDSKYDYSVV 1417
>sp|Q7SCC1|DCL2_NEUCR Dicer-like protein 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dcl-2
PE=2 SV=3
Length = 1540
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 183/430 (42%), Gaps = 91/430 (21%)
Query: 402 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDS 461
+P+ ++ L+A +L L C+Q +P + A+ + + + E LE +GD+
Sbjct: 950 IPAFTRAVEMSLVAADLMYNRLG-CLQLDNLPL--ITTALISSGSRGPTNYERLEFIGDT 1006
Query: 462 FLKYAA--SQQLFKTYQ----NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFI----RT 511
LK+ A + + NHHE LLS KD++++N LC+ D L +I +
Sbjct: 1007 ILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYIINSAAS 1066
Query: 512 EPFDPKMWMIPGDNSGSYELNDHSLFNERKIYVTGR-KKVKSKTVADVVEALIGAFLSTG 570
+ + PK + D+ +E K ++ +++ SK VADVVE+LIGA G
Sbjct: 1067 KKWRPKF------------VEDY--MDEMKSPISAETRQMSSKMVADVVESLIGAAYMCG 1112
Query: 571 G-----ENVGLIFLDRIGIKVDFVNVPYERQ--FQVQAERLVNVRHLESL---LNYSFRD 620
G E V L+ + + + R F+ + + + LE L ++Y+F
Sbjct: 1113 GMSKALECVALLLPTPKSSQFKWQEIELSRTQLFEFAPKDAILSKQLEPLEKAMDYTFNK 1172
Query: 621 PSLLVEALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP--TLSPGDLTDMR 677
SLL+EA+TH S L CY+RLEFLGDA+LD ++ L + L+ D+ +
Sbjct: 1173 KSLLIEAMTHPSCAGLGTNESCYERLEFLGDAILDVIVVKRLMAETGPNELAHNDMHEHL 1232
Query: 678 SASVNNDCYALSSVKH------------------GL----------------------HK 697
S+ V D A +++ GL +
Sbjct: 1233 SSVVTADIMAFLAMEWVIMQTDINEIDPTNLDALGLLPSSQSRITPASLVSNKEDWPFWR 1292
Query: 698 HILHASQELYKWINITVDSFERLSLESTFGWESETSFPKAL----------GDIIESLSG 747
+ H S ++ T++ + L E + P AL DI+ESL G
Sbjct: 1293 FMRHNSPQVGATQTATIERYLTLRDEIRDAIWKHNTLPWALLARMGPQKFYSDIVESLIG 1352
Query: 748 AIFVDSGCNK 757
A++VDSG K
Sbjct: 1353 AVWVDSGSWK 1362
>sp|B0BBS8|RNC_CHLTB Ribonuclease 3 OS=Chlamydia trachomatis serovar L2b (strain
UCH-1/proctitis) GN=rnc PE=3 SV=1
Length = 231
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHSSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P L+ G L+ R+A VN + + K L +H+L + E++
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVF------ESIRPLLEPMITP 774
+S A ++ E++ GA+++D G + ++++ ESI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLFEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 775 ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ RLQ + + K S K +G V+V NG L+ A + KE A+
Sbjct: 162 KN-RLQ---QFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGFAGSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+K+ L +
Sbjct: 217 KLAAKQALST 226
>sp|O84299|RNC_CHLTR Ribonuclease 3 OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=rnc
PE=3 SV=1
Length = 231
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 38/250 (15%)
Query: 605 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 662
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 663 NKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDSFERLSL 722
+P L+ G L+ R+A VN + + K L +H+L + E++
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 723 ESTFGWESETSFPKALGDIIESLSGAIFVDSGCN--KEVVF------ESIRPLLEPMITP 774
+S A +++E++ GA+++D G + ++++ ESI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLLEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 775 ETMRLQPARELNEYCQKHHFSMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAK 834
+ RLQ + + K S K +G V+V NG L+ A + KE A+
Sbjct: 162 KN-RLQ---QFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGFAGSKKE-AE 216
Query: 835 KVASKEVLKS 844
K+A+K+ L +
Sbjct: 217 KLAAKQALST 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 315,085,898
Number of Sequences: 539616
Number of extensions: 13294304
Number of successful extensions: 30343
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 28134
Number of HSP's gapped (non-prelim): 1310
length of query: 852
length of database: 191,569,459
effective HSP length: 126
effective length of query: 726
effective length of database: 123,577,843
effective search space: 89717514018
effective search space used: 89717514018
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)