Query 003063
Match_columns 851
No_of_seqs 204 out of 343
Neff 4.2
Searched_HMMs 46136
Date Thu Mar 28 16:17:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003063.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003063hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03110 SBP: SBP domain; Int 100.0 5.7E-36 1.2E-40 263.9 -1.2 78 149-226 1-78 (79)
2 KOG4412 26S proteasome regulat 98.5 4.3E-08 9.4E-13 99.7 2.2 56 758-837 38-93 (226)
3 PF13637 Ank_4: Ankyrin repeat 98.2 1E-06 2.2E-11 71.3 4.1 53 758-835 1-53 (54)
4 PF12796 Ank_2: Ankyrin repeat 98.2 3.1E-06 6.7E-11 73.6 6.9 80 720-837 1-80 (89)
5 PF13857 Ank_5: Ankyrin repeat 98.1 2.4E-06 5.1E-11 70.4 3.3 42 757-822 15-56 (56)
6 KOG0515 p53-interacting protei 97.6 8.6E-05 1.9E-09 85.1 6.8 54 758-836 583-636 (752)
7 PHA02741 hypothetical protein; 97.6 0.00018 3.8E-09 70.8 7.8 89 719-835 63-151 (169)
8 KOG0512 Fetal globin-inducing 97.6 0.00014 3E-09 74.4 7.2 114 718-840 65-188 (228)
9 PHA02741 hypothetical protein; 97.5 0.0002 4.3E-09 70.4 6.4 90 719-837 24-119 (169)
10 PHA02743 Viral ankyrin protein 97.4 0.00046 9.9E-09 68.1 7.2 99 717-845 58-163 (166)
11 PHA02791 ankyrin-like protein; 97.3 0.0004 8.7E-09 75.1 7.1 82 719-835 131-213 (284)
12 PHA02875 ankyrin repeat protei 97.3 0.00034 7.3E-09 77.2 6.5 84 719-836 105-188 (413)
13 PHA02875 ankyrin repeat protei 97.3 0.00042 9E-09 76.4 7.0 87 719-838 71-157 (413)
14 PHA02791 ankyrin-like protein; 97.2 0.00056 1.2E-08 74.0 6.8 51 719-780 33-83 (284)
15 PHA02743 Viral ankyrin protein 97.2 0.00067 1.5E-08 66.9 6.7 87 720-836 24-114 (166)
16 PHA02736 Viral ankyrin protein 97.2 0.00076 1.7E-08 64.8 6.4 56 758-837 92-147 (154)
17 PHA02878 ankyrin repeat protei 97.2 0.00061 1.3E-08 77.2 6.6 54 719-781 171-224 (477)
18 KOG4412 26S proteasome regulat 97.2 0.00059 1.3E-08 70.3 5.7 83 719-835 109-191 (226)
19 PHA02874 ankyrin repeat protei 97.1 0.0014 3.1E-08 73.2 8.1 78 758-836 124-210 (434)
20 PHA02878 ankyrin repeat protei 97.0 0.00064 1.4E-08 77.0 5.0 54 757-835 36-89 (477)
21 PHA02859 ankyrin repeat protei 97.0 0.002 4.4E-08 65.9 7.4 103 719-835 24-144 (209)
22 PHA02795 ankyrin-like protein; 96.9 0.0016 3.4E-08 74.7 6.9 60 757-840 220-286 (437)
23 PHA02884 ankyrin repeat protei 96.9 0.0018 3.9E-08 70.9 6.9 61 716-781 33-93 (300)
24 PHA02874 ankyrin repeat protei 96.9 0.0018 3.9E-08 72.4 6.6 25 809-835 217-241 (434)
25 PHA03095 ankyrin-like protein; 96.8 0.0031 6.8E-08 70.3 8.1 54 719-781 50-107 (471)
26 PHA02798 ankyrin-like protein; 96.8 0.0021 4.7E-08 73.2 6.9 55 757-836 257-311 (489)
27 PHA03100 ankyrin repeat protei 96.7 0.0038 8.2E-08 70.0 7.5 28 807-835 275-302 (480)
28 KOG0509 Ankyrin repeat and DHH 96.7 0.0014 3E-08 76.9 4.1 76 758-835 112-198 (600)
29 PHA03100 ankyrin repeat protei 96.6 0.0028 6.1E-08 71.0 6.2 84 719-836 109-196 (480)
30 PHA02859 ankyrin repeat protei 96.6 0.0041 8.9E-08 63.7 6.6 56 757-836 122-179 (209)
31 PHA03095 ankyrin-like protein; 96.6 0.0023 5E-08 71.4 4.7 54 757-835 256-309 (471)
32 PHA02989 ankyrin repeat protei 96.5 0.0027 5.9E-08 72.5 5.1 60 757-841 255-315 (494)
33 PHA02730 ankyrin-like protein; 96.5 0.0026 5.6E-08 76.3 5.0 55 758-836 41-99 (672)
34 PHA02946 ankyin-like protein; 96.5 0.0052 1.1E-07 70.1 7.1 25 757-781 71-95 (446)
35 COG0666 Arp FOG: Ankyrin repea 96.5 0.0037 7.9E-08 59.9 4.8 58 757-836 105-167 (235)
36 PLN03192 Voltage-dependent pot 96.4 0.0045 9.8E-08 75.5 6.7 52 760-836 624-675 (823)
37 PLN03192 Voltage-dependent pot 96.4 0.0041 8.9E-08 75.9 6.2 82 720-835 529-610 (823)
38 PF12796 Ank_2: Ankyrin repeat 96.4 0.0044 9.6E-08 53.9 4.8 47 762-837 1-47 (89)
39 PTZ00322 6-phosphofructo-2-kin 96.4 0.0049 1.1E-07 73.8 6.4 83 720-836 86-168 (664)
40 KOG4177 Ankyrin [Cell wall/mem 96.3 0.0051 1.1E-07 77.1 6.1 52 759-835 541-592 (1143)
41 PHA02946 ankyin-like protein; 96.3 0.0051 1.1E-07 70.2 5.6 80 719-840 300-380 (446)
42 PHA02876 ankyrin repeat protei 96.3 0.0091 2E-07 70.9 7.8 84 719-836 148-231 (682)
43 TIGR00870 trp transient-recept 96.0 0.0064 1.4E-07 73.0 4.9 73 757-841 127-200 (743)
44 KOG0520 Uncharacterized conser 96.0 0.028 6.1E-07 69.4 9.8 236 548-835 405-660 (975)
45 PHA02736 Viral ankyrin protein 95.9 0.0032 7E-08 60.5 1.5 56 757-837 54-113 (154)
46 KOG0195 Integrin-linked kinase 95.8 0.0077 1.7E-07 65.8 4.0 53 758-835 34-86 (448)
47 PHA02884 ankyrin repeat protei 95.6 0.015 3.2E-07 63.9 5.0 22 760-781 35-56 (300)
48 PHA02917 ankyrin-like protein; 95.6 0.026 5.6E-07 67.9 7.5 78 733-839 432-510 (661)
49 PHA02989 ankyrin repeat protei 95.5 0.024 5.3E-07 64.8 6.7 23 758-780 108-133 (494)
50 COG0666 Arp FOG: Ankyrin repea 95.5 0.028 6.1E-07 53.8 6.0 81 727-838 122-202 (235)
51 KOG0195 Integrin-linked kinase 95.4 0.018 3.9E-07 63.0 4.9 92 719-844 37-128 (448)
52 PHA02876 ankyrin repeat protei 95.4 0.017 3.6E-07 68.7 5.0 79 757-837 374-464 (682)
53 PHA02798 ankyrin-like protein; 95.3 0.028 6.2E-07 64.2 6.4 75 734-837 90-169 (489)
54 KOG4177 Ankyrin [Cell wall/mem 95.3 0.018 3.8E-07 72.5 5.0 94 713-840 537-633 (1143)
55 PF13606 Ank_3: Ankyrin repeat 95.2 0.017 3.6E-07 42.7 2.7 24 758-781 2-25 (30)
56 PHA02716 CPXV016; CPX019; EVM0 95.2 0.017 3.6E-07 70.5 4.3 56 757-836 496-560 (764)
57 PHA02716 CPXV016; CPX019; EVM0 95.1 0.036 7.9E-07 67.7 6.8 55 757-835 211-269 (764)
58 PF13606 Ank_3: Ankyrin repeat 95.0 0.011 2.4E-07 43.6 1.3 22 815-837 2-23 (30)
59 cd00204 ANK ankyrin repeats; 95.0 0.038 8.2E-07 48.4 4.9 25 758-782 7-31 (126)
60 KOG0510 Ankyrin repeat protein 95.0 0.035 7.5E-07 67.3 5.9 24 811-835 337-360 (929)
61 PF00023 Ank: Ankyrin repeat H 95.0 0.021 4.6E-07 42.2 2.6 24 758-781 2-25 (33)
62 KOG0509 Ankyrin repeat and DHH 94.8 0.042 9.1E-07 65.0 5.9 104 720-835 116-231 (600)
63 PHA02795 ankyrin-like protein; 94.6 0.073 1.6E-06 61.4 7.1 28 808-836 214-241 (437)
64 cd00204 ANK ankyrin repeats; 94.5 0.061 1.3E-06 47.1 4.9 85 719-837 10-94 (126)
65 PF00023 Ank: Ankyrin repeat H 94.5 0.019 4.1E-07 42.4 1.3 22 815-837 2-23 (33)
66 KOG0510 Ankyrin repeat protein 94.3 0.045 9.8E-07 66.4 4.8 118 680-843 287-404 (929)
67 PHA02917 ankyrin-like protein; 94.0 0.14 3.1E-06 61.7 8.1 84 719-835 71-157 (661)
68 KOG0502 Integral membrane anky 93.6 0.056 1.2E-06 57.6 3.3 54 757-835 159-212 (296)
69 KOG1710 MYND Zn-finger and ank 93.5 0.18 3.9E-06 55.6 7.0 82 724-838 20-101 (396)
70 PF13637 Ank_4: Ankyrin repeat 92.7 0.16 3.4E-06 41.1 4.1 51 719-778 4-54 (54)
71 PHA02730 ankyrin-like protein; 92.1 0.18 4E-06 61.0 5.2 59 757-839 461-522 (672)
72 KOG3676 Ca2+-permeable cation 91.8 0.31 6.7E-06 59.4 6.5 67 757-837 183-261 (782)
73 PF13857 Ank_5: Ankyrin repeat 91.7 0.083 1.8E-06 43.6 1.3 30 807-837 8-37 (56)
74 PTZ00322 6-phosphofructo-2-kin 91.7 0.21 4.5E-06 60.2 5.0 52 760-836 84-135 (664)
75 KOG0505 Myosin phosphatase, re 91.4 0.19 4.1E-06 58.7 4.1 54 757-835 72-125 (527)
76 KOG0505 Myosin phosphatase, re 90.6 0.21 4.5E-06 58.4 3.5 52 759-835 199-250 (527)
77 TIGR00870 trp transient-recept 90.5 0.29 6.2E-06 59.2 4.8 21 760-780 54-75 (743)
78 PHA02792 ankyrin-like protein; 90.5 0.48 1E-05 57.1 6.4 43 758-824 410-452 (631)
79 KOG0502 Integral membrane anky 88.3 0.9 1.9E-05 48.8 5.8 83 719-835 163-245 (296)
80 PHA02792 ankyrin-like protein; 88.1 0.57 1.2E-05 56.5 4.8 58 758-839 175-240 (631)
81 KOG0507 CASK-interacting adapt 87.5 0.52 1.1E-05 57.3 3.9 88 719-841 52-143 (854)
82 KOG3609 Receptor-activated Ca2 85.3 1.5 3.2E-05 54.0 6.2 61 760-835 90-150 (822)
83 KOG0522 Ankyrin repeat protein 84.2 1.8 3.9E-05 51.1 6.0 79 724-835 29-107 (560)
84 smart00248 ANK ankyrin repeats 82.9 1.4 3.1E-05 28.2 2.8 24 758-781 2-25 (30)
85 KOG0512 Fetal globin-inducing 82.4 1.7 3.8E-05 45.3 4.4 53 759-835 64-116 (228)
86 KOG0508 Ankyrin repeat protein 81.2 1.1 2.4E-05 52.4 2.8 108 722-836 48-170 (615)
87 KOG0508 Ankyrin repeat protein 80.8 1.5 3.1E-05 51.4 3.6 80 723-837 157-236 (615)
88 KOG0507 CASK-interacting adapt 80.7 1 2.2E-05 55.0 2.4 54 757-835 48-101 (854)
89 KOG0782 Predicted diacylglycer 80.5 0.81 1.8E-05 54.1 1.5 54 759-835 900-953 (1004)
90 cd00603 IPT_PCSR IPT domain of 79.1 7.5 0.00016 34.4 6.9 40 548-587 1-40 (90)
91 KOG0514 Ankyrin repeat protein 78.6 4.7 0.0001 46.1 6.6 59 758-841 340-398 (452)
92 KOG4214 Myotrophin and similar 74.6 3.2 7E-05 39.7 3.4 56 755-835 31-86 (117)
93 cd00102 IPT Immunoglobulin-lik 73.4 14 0.0003 32.1 7.0 38 548-586 1-39 (89)
94 PF01833 TIG: IPT/TIG domain; 70.2 8.3 0.00018 32.9 4.7 72 548-634 1-73 (85)
95 cd01180 IPT_plexin_repeat1 Fir 68.3 8.4 0.00018 35.3 4.6 40 548-587 1-42 (94)
96 KOG2505 Ankyrin repeat protein 65.0 5 0.00011 47.4 2.9 60 759-847 431-490 (591)
97 KOG0705 GTPase-activating prot 62.1 8.3 0.00018 46.3 4.1 62 758-844 661-724 (749)
98 smart00429 IPT ig-like, plexin 61.8 13 0.00027 32.9 4.3 38 548-586 2-39 (90)
99 KOG0818 GTPase-activating prot 60.7 7.8 0.00017 45.8 3.5 53 759-835 168-223 (669)
100 PF09099 Qn_am_d_aIII: Quinohe 59.9 12 0.00027 34.3 4.0 26 548-573 2-27 (81)
101 PF10866 DUF2704: Protein of u 59.4 7.9 0.00017 39.6 2.8 30 452-481 123-159 (168)
102 cd01179 IPT_plexin_repeat2 Sec 59.2 16 0.00034 32.7 4.5 39 548-587 1-39 (85)
103 KOG4214 Myotrophin and similar 54.7 27 0.00059 33.7 5.3 81 718-835 36-116 (117)
104 KOG0514 Ankyrin repeat protein 48.7 24 0.00051 40.8 4.7 83 719-834 343-425 (452)
105 KOG4369 RTK signaling protein 47.5 12 0.00026 48.2 2.3 53 760-837 759-811 (2131)
106 KOG0520 Uncharacterized conser 45.7 19 0.00041 45.8 3.7 60 757-835 640-699 (975)
107 cd02849 CGTase_C_term Cgtase ( 44.5 86 0.0019 28.5 6.8 76 547-642 2-79 (81)
108 cd01181 IPT_plexin_repeat3 Thi 40.7 48 0.001 31.0 4.7 41 548-588 1-42 (99)
109 KOG0521 Putative GTPase activa 38.2 20 0.00043 44.9 2.3 73 757-832 655-738 (785)
110 KOG0783 Uncharacterized conser 32.6 22 0.00048 44.6 1.4 54 758-835 52-105 (1267)
111 KOG0506 Glutaminase (contains 32.0 31 0.00068 40.9 2.4 52 760-835 541-592 (622)
112 KOG4369 RTK signaling protein 32.0 23 0.00051 45.7 1.5 22 760-781 826-847 (2131)
113 KOG3676 Ca2+-permeable cation 31.1 52 0.0011 41.1 4.2 111 719-835 187-327 (782)
114 PF14901 Jiv90: Cleavage induc 30.4 23 0.0005 33.6 0.9 18 187-204 26-43 (94)
115 KOG0818 GTPase-activating prot 30.4 64 0.0014 38.7 4.5 59 751-835 128-186 (669)
116 KOG0705 GTPase-activating prot 29.7 49 0.0011 40.2 3.6 55 760-835 626-680 (749)
117 KOG0515 p53-interacting protei 28.4 58 0.0013 39.3 3.8 51 760-835 552-602 (752)
118 KOG0521 Putative GTPase activa 27.9 61 0.0013 40.8 4.1 55 715-779 655-710 (785)
119 PF05587 Anth_Ig: Anthrax rece 27.8 20 0.00043 34.6 0.0 37 549-585 7-45 (105)
120 PRK00241 nudC NADH pyrophospha 25.1 24 0.00053 38.2 0.1 38 161-199 91-128 (256)
121 cd00604 IPT_CGTD IPT domain (d 25.1 2.5E+02 0.0053 25.6 6.4 77 548-644 1-79 (81)
122 KOG0522 Ankyrin repeat protein 25.0 59 0.0013 39.1 3.1 47 760-829 22-69 (560)
123 KOG3609 Receptor-activated Ca2 23.9 59 0.0013 40.9 2.9 62 761-843 28-89 (822)
124 cd02969 PRX_like1 Peroxiredoxi 23.1 1.4E+02 0.003 29.4 4.9 48 431-478 116-169 (171)
No 1
>PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain []. Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A.
Probab=100.00 E-value=5.7e-36 Score=263.94 Aligned_cols=78 Identities=65% Similarity=1.133 Sum_probs=63.2
Q ss_pred ceeccCCchhhccCchhhcccccchhhcCcceeeeCCchhhhhHhhhcCcccccccCCcchHHHHHhhhhhhhccCCC
Q 003063 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 226 (851)
Q Consensus 149 ~CqV~gC~~dL~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFd~~krSCr~~L~~hn~RRRk~~~ 226 (851)
+||||||++||+.+|.||+||||||.|+||++|+++|.++||||||+|||+|+||||+|||||++|++||+||||+++
T Consensus 1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~ 78 (79)
T PF03110_consen 1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ 78 (79)
T ss_dssp C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999875
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=4.3e-08 Score=99.71 Aligned_cols=56 Identities=36% Similarity=0.507 Sum_probs=47.0
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+=+||||||+.++.++|+|||. .|. -.||--+-+|||||||||+. |+.+|+++|-+
T Consensus 38 ~Rt~LHwa~S~g~~eiv~fLls-q~n----------------------v~~ddkDdaGWtPlhia~s~-g~~evVk~Ll~ 93 (226)
T KOG4412|consen 38 GRTPLHWACSFGHVEIVYFLLS-QPN----------------------VKPDDKDDAGWTPLHIAASN-GNDEVVKELLN 93 (226)
T ss_pred CCceeeeeeecCchhHHHHHHh-cCC----------------------CCCCCccccCCchhhhhhhc-CcHHHHHHHhc
Confidence 4599999999999999999996 322 34555588999999999999 79999999944
No 3
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.24 E-value=1e-06 Score=71.34 Aligned_cols=53 Identities=32% Similarity=0.390 Sum_probs=39.5
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
++++||+|++.+..++|++|+... .+++..+-.|.||||+|+.. |..++++.|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~------------------------~din~~d~~g~t~lh~A~~~-g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG------------------------ADINAQDEDGRTPLHYAAKN-GNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT------------------------SGTT-B-TTS--HHHHHHHT-T-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC------------------------CCCCCCCCCCCCHHHHHHHc-cCHHHHHHH
Confidence 478999999999999999999653 33566678899999999977 789998876
No 4
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.22 E-value=3.1e-06 Score=73.62 Aligned_cols=80 Identities=23% Similarity=0.282 Sum_probs=62.8
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccC
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 799 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~ 799 (851)
|-+|++++-..+++.||. ....++. +-++||+|+..++.+||++|+.+.
T Consensus 1 L~~A~~~~~~~~~~~ll~--~~~~~~~-----------~~~~l~~A~~~~~~~~~~~Ll~~g------------------ 49 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE--KGADINL-----------GNTALHYAAENGNLEIVKLLLENG------------------ 49 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH--TTSTTTS-----------SSBHHHHHHHTTTHHHHHHHHHTT------------------
T ss_pred CHHHHHcCCHHHHHHHHH--CcCCCCC-----------CCCHHHHHHHcCCHHHHHHHHHhc------------------
Confidence 457888888999999998 2111221 447999999999999999999763
Q ss_pred cccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 800 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 800 ~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++.....|+||||+|+.. +..+|++.|.+
T Consensus 50 ------~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~ 80 (89)
T PF12796_consen 50 ------ADINSQDKNGNTALHYAAEN-GNLEIVKLLLE 80 (89)
T ss_dssp ------TCTT-BSTTSSBHHHHHHHT-THHHHHHHHHH
T ss_pred ------ccccccCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 44566678999999999886 89999999943
No 5
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.09 E-value=2.4e-06 Score=70.43 Aligned_cols=42 Identities=33% Similarity=0.366 Sum_probs=27.8
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIA 822 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIA 822 (851)
.+.|+||+|+++++.++|++||.+. -++++....|+||||+|
T Consensus 15 ~G~T~LH~A~~~g~~~~v~~Ll~~g------------------------~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 15 YGNTPLHWAARYGHSEVVRLLLQNG------------------------ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TS--HHHHHHHHT-HHHHHHHHHCT--------------------------TT---TTS--HHHH-
T ss_pred CCCcHHHHHHHcCcHHHHHHHHHCc------------------------CCCCCCcCCCCCHHHhC
Confidence 4679999999999999999999653 45678899999999998
No 6
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=97.63 E-value=8.6e-05 Score=85.14 Aligned_cols=54 Identities=24% Similarity=0.352 Sum_probs=46.0
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
+||.||-||+.++.+||+||+.|-.+ .++.+-.||||||.||+- .+.-|..+|-
T Consensus 583 GITaLHNAiCaghyeIVkFLi~~gan------------------------VNa~DSdGWTPLHCAASC-Nnv~~ckqLV 636 (752)
T KOG0515|consen 583 GITALHNAICAGHYEIVKFLIEFGAN------------------------VNAADSDGWTPLHCAASC-NNVPMCKQLV 636 (752)
T ss_pred chhHHhhhhhcchhHHHHHHHhcCCc------------------------ccCccCCCCchhhhhhhc-CchHHHHHHH
Confidence 78999999999999999999988532 256788999999999998 5777777773
No 7
>PHA02741 hypothetical protein; Provisional
Probab=97.60 E-value=0.00018 Score=70.83 Aligned_cols=89 Identities=12% Similarity=0.180 Sum_probs=64.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+.-.++.+++..|.+.+.+...... ..+.||||.|++.+..++|++||....
T Consensus 63 ~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~----~~g~TpLh~A~~~~~~~iv~~Ll~~~g---------------- 122 (169)
T PHA02741 63 CIHIAAEKHEAQLAAEIIDHLIELGADINAQEM----LEGDTALHLAAHRRDHDLAEWLCCQPG---------------- 122 (169)
T ss_pred HHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc----CCCCCHHHHHHHcCCHHHHHHHHhCCC----------------
Confidence 566777776655566777777765444322111 147799999999999999999996421
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+++.....|+||||+|+.. +..++++.|
T Consensus 123 -------~~~~~~n~~g~tpL~~A~~~-~~~~iv~~L 151 (169)
T PHA02741 123 -------IDLHFCNADNKSPFELAIDN-EDVAMMQIL 151 (169)
T ss_pred -------CCCCcCCCCCCCHHHHHHHC-CCHHHHHHH
Confidence 12345567899999999987 788999988
No 8
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=97.60 E-value=0.00014 Score=74.38 Aligned_cols=114 Identities=24% Similarity=0.213 Sum_probs=72.5
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
+|+.+|.+.+=...|+.||.-=. -.|.+- .-.|-||||||+-.|+.+||+.||.|-.++....... =--+.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~a-n~vNtr-------D~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~G-WTPLh 135 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKA-NHVNTR-------DEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEG-WTPLH 135 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhcc-cccccc-------ccccccHHHHHHhcCchHHHHHHHHccCCcccccccC-ccchh
Confidence 57777888888888888887322 123221 2257899999999999999999997764432111000 00000
Q ss_pred --------cCcccccccCCC--CCCCCCCchhhhhcccCCchhHHHhhhcCcc
Q 003063 798 --------DGVHKGFLFRPD--VIGPAGLTPIHIAAGKDGSEDVLDALTDDPG 840 (851)
Q Consensus 798 --------~~~~~~y~F~pd--~~Gp~GlTPLHIAA~~~gs~~vldaLt~dP~ 840 (851)
+..+.-..|..| +.--+-||||||||......+-+..|-.||.
T Consensus 136 SAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry 188 (228)
T KOG0512|consen 136 SACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRY 188 (228)
T ss_pred hhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccc
Confidence 001111134444 3457889999999999999999988876654
No 9
>PHA02741 hypothetical protein; Provisional
Probab=97.48 E-value=0.0002 Score=70.45 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=62.2
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHH-HHHhhhhHHHHHHHcCC----hhHHHHHHhcccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLD-LALTELGLLHRAVRKNS----RPLVDLLLRFVPLEVSDRLGSEN 793 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e-~~l~em~LLH~AVr~~s----~~mVelLl~~~~~~~~~~~~~~~ 793 (851)
.|-+|+..+...+++.|+..+.. .+.|. .++ .-..+.|+||.|+.+++ .+++++|+.+.
T Consensus 24 ~Lh~Aa~~g~~~~v~~l~~~~~~--~~~ga--~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g------------ 87 (169)
T PHA02741 24 FFHEAARCGCFDIIARFTPFIRG--DCHAA--ALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG------------ 87 (169)
T ss_pred HHHHHHHcCCHHHHHHHHHHhcc--chhhh--hhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC------------
Confidence 67789999999999998875411 01110 011 01246799999999999 47788888653
Q ss_pred cccccCcccccccCCCCCCC-CCCchhhhhcccCCchhHHHhhhc
Q 003063 794 KALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 794 ~~~v~~~~~~y~F~pd~~Gp-~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++.... .|.||||+|+.. +..+++..|-.
T Consensus 88 ------------adin~~~~~~g~TpLh~A~~~-~~~~iv~~Ll~ 119 (169)
T PHA02741 88 ------------ADINAQEMLEGDTALHLAAHR-RDHDLAEWLCC 119 (169)
T ss_pred ------------CCCCCCCcCCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 12344443 799999999977 68889988854
No 10
>PHA02743 Viral ankyrin protein; Provisional
Probab=97.36 E-value=0.00046 Score=68.09 Aligned_cols=99 Identities=19% Similarity=0.146 Sum_probs=65.2
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHh-cccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLR-FVPLEVSDRLGSENKA 795 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~-~~~~~~~~~~~~~~~~ 795 (851)
+..|-+|+..+..-++ +++..|+..+.+..... -..+-||||+||.++..+||++|+. ..
T Consensus 58 ~t~Lh~Aa~~g~~~~~-~~i~~Ll~~Gadin~~d----~~~g~TpLh~A~~~g~~~iv~~Ll~~~g-------------- 118 (166)
T PHA02743 58 RQCTHMVAWYDRANAV-MKIELLVNMGADINARE----LGTGNTLLHIAASTKNYELAEWLCRQLG-------------- 118 (166)
T ss_pred CcHHHHHHHhCccCHH-HHHHHHHHcCCCCCCCC----CCCCCcHHHHHHHhCCHHHHHHHHhccC--------------
Confidence 3467777776553222 22333444333322111 0235699999999999999999994 42
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh------hcCcccceee
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL------TDDPGMVISL 845 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL------t~dP~~vgl~ 845 (851)
-+++.....|.||||+|+.. +..++++.| .+.|--+|++
T Consensus 119 ----------ad~~~~d~~g~tpL~~A~~~-~~~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 119 ----------VNLGAINYQHETAYHIAYKM-RDRRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred ----------CCccCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCcccCCcc
Confidence 23456678999999999988 678899998 4566666665
No 11
>PHA02791 ankyrin-like protein; Provisional
Probab=97.34 E-value=0.0004 Score=75.06 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=53.2
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.- +. +. .+ .-.+.||||.|+++++.+||++||.+..
T Consensus 131 pL~~Aa~~g~~eivk~LL~~---~~-~~-----~d-~~~g~TpLh~Aa~~g~~eiv~lLL~~gA---------------- 184 (284)
T PHA02791 131 SFYHAVMLNDVSIVSYFLSE---IP-ST-----FD-LAILLSCIHITIKNGHVDMMILLLDYMT---------------- 184 (284)
T ss_pred HHHHHHHcCCHHHHHHHHhc---CC-cc-----cc-cccCccHHHHHHHcCCHHHHHHHHHCCC----------------
Confidence 45566666666666666652 10 00 00 0124689999999999999999987742
Q ss_pred CcccccccCCCCCCCCCCch-hhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTP-IHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTP-LHIAA~~~gs~~vldaL 835 (851)
+++..+.-|.|| ||+||.. |..+++..|
T Consensus 185 --------d~n~~d~~g~t~~L~~Aa~~-~~~e~v~lL 213 (284)
T PHA02791 185 --------STNTNNSLLFIPDIKLAIDN-KDLEMLQAL 213 (284)
T ss_pred --------CCCcccCCCCChHHHHHHHc-CCHHHHHHH
Confidence 134445566766 9998887 788888888
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=97.33 E-value=0.00034 Score=77.17 Aligned_cols=84 Identities=20% Similarity=0.186 Sum_probs=57.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+.... -..+.||||+|++.+..++|++|+.+.+
T Consensus 105 pL~~A~~~~~~~iv~~Ll~~----gad~~~~-----~~~g~tpLh~A~~~~~~~~v~~Ll~~g~---------------- 159 (413)
T PHA02875 105 PLHLATILKKLDIMKLLIAR----GADPDIP-----NTDKFSPLHLAVMMGDIKGIELLIDHKA---------------- 159 (413)
T ss_pred HHHHHHHhCCHHHHHHHHhC----CCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHhcCC----------------
Confidence 45667777777777777762 2221111 1135689999999999999999987631
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.++..+..|.||||+||.. |..+++..|-
T Consensus 160 --------~~~~~d~~g~TpL~~A~~~-g~~eiv~~Ll 188 (413)
T PHA02875 160 --------CLDIEDCCGCTPLIIAMAK-GDIAICKMLL 188 (413)
T ss_pred --------CCCCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 2355677788888888877 6788888873
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=97.31 E-value=0.00042 Score=76.45 Aligned_cols=87 Identities=20% Similarity=0.275 Sum_probs=62.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. |... . ... -..+.||||+|+..+..++|++|+.+.
T Consensus 71 ~L~~A~~~g~~~~v~~Ll~~---~~~~-~--~~~--~~~g~tpL~~A~~~~~~~iv~~Ll~~g----------------- 125 (413)
T PHA02875 71 ELHDAVEEGDVKAVEELLDL---GKFA-D--DVF--YKDGMTPLHLATILKKLDIMKLLIARG----------------- 125 (413)
T ss_pred HHHHHHHCCCHHHHHHHHHc---CCcc-c--ccc--cCCCCCHHHHHHHhCCHHHHHHHHhCC-----------------
Confidence 46677888888888888762 1100 0 000 113679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcC
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 838 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~d 838 (851)
-+|+..+..|.||||+|+.. |..++++.|-+.
T Consensus 126 -------ad~~~~~~~g~tpLh~A~~~-~~~~~v~~Ll~~ 157 (413)
T PHA02875 126 -------ADPDIPNTDKFSPLHLAVMM-GDIKGIELLIDH 157 (413)
T ss_pred -------CCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHhc
Confidence 23566677899999999987 788999999543
No 14
>PHA02791 ankyrin-like protein; Provisional
Probab=97.24 E-value=0.00056 Score=73.96 Aligned_cols=51 Identities=20% Similarity=0.172 Sum_probs=33.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.|-||+..+--.+++.||.. +.+... ..+.||||.|+..++.++|++|+..
T Consensus 33 pLh~Aa~~g~~eiv~~Ll~~----ga~~n~-------~d~~TpLh~Aa~~g~~eiV~lLL~~ 83 (284)
T PHA02791 33 ALYYAIADNNVRLVCTLLNA----GALKNL-------LENEFPLHQAATLEDTKIVKILLFS 83 (284)
T ss_pred HHHHHHHcCCHHHHHHHHHC----cCCCcC-------CCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 67778888887777777652 111110 1235788888888888888877754
No 15
>PHA02743 Viral ankyrin protein; Provisional
Probab=97.22 E-value=0.00067 Score=66.93 Aligned_cols=87 Identities=13% Similarity=0.016 Sum_probs=57.4
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhH---HHHHHhccccccccccccccccc
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPL---VDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~m---VelLl~~~~~~~~~~~~~~~~~~ 796 (851)
+-+|+..+-...+++++..|.+.+...... --.+.++||+|+..++.+. |++|+.+-
T Consensus 24 l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~-----d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G--------------- 83 (166)
T PHA02743 24 FLRICRTGNIYELMEVAPFISGDGHLLHRY-----DHHGRQCTHMVAWYDRANAVMKIELLVNMG--------------- 83 (166)
T ss_pred HHHHHHcCCHHHHHHHHHHHhhcchhhhcc-----CCCCCcHHHHHHHhCccCHHHHHHHHHHcC---------------
Confidence 344555555555666666665433221100 1136799999999988654 78998663
Q ss_pred ccCcccccccCCCCCC-CCCCchhhhhcccCCchhHHHhhh
Q 003063 797 VDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 797 v~~~~~~y~F~pd~~G-p~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-+++... ..|.||||+||.. +..+++..|-
T Consensus 84 ---------adin~~d~~~g~TpLh~A~~~-g~~~iv~~Ll 114 (166)
T PHA02743 84 ---------ADINARELGTGNTLLHIAAST-KNYELAEWLC 114 (166)
T ss_pred ---------CCCCCCCCCCCCcHHHHHHHh-CCHHHHHHHH
Confidence 2234555 4799999999987 7889999885
No 16
>PHA02736 Viral ankyrin protein; Provisional
Probab=97.18 E-value=0.00076 Score=64.82 Aligned_cols=56 Identities=20% Similarity=0.146 Sum_probs=45.7
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+-|+||+|++.+..++|++||.-. .-+++...-.|.||||+|+.. +..+|++.|..
T Consensus 92 g~T~Lh~A~~~~~~~i~~~Ll~~~-----------------------g~d~n~~~~~g~tpL~~A~~~-~~~~i~~~Ll~ 147 (154)
T PHA02736 92 GNTPLHIAVYTQNYELATWLCNQP-----------------------GVNMEILNYAFKTPYYVACER-HDAKMMNILRA 147 (154)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhCC-----------------------CCCCccccCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 569999999999999999999521 112456677999999999987 78999999854
No 17
>PHA02878 ankyrin repeat protein; Provisional
Probab=97.17 E-value=0.00061 Score=77.15 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=39.1
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
.|-+|+..+-..+++.||.. +.+... ..-.+.||||.|++.++.+||++|+.+.
T Consensus 171 pLh~A~~~~~~~iv~~Ll~~----gad~n~-----~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 224 (477)
T PHA02878 171 ALHYATENKDQRLTELLLSY----GANVNI-----PDKTNNSPLHHAVKHYNKPIVHILLENG 224 (477)
T ss_pred HHHHHHhCCCHHHHHHHHHC----CCCCCC-----cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 56778888888888888862 222110 0123679999999999999999999764
No 18
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=97.17 E-value=0.00059 Score=70.27 Aligned_cols=83 Identities=19% Similarity=0.234 Sum_probs=59.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
-|-||.-.+|-.|+..||..-.. +. .. ..-+-+|||||+.-++.+|+++|+.+...
T Consensus 109 ~LHyAagK~r~eIaqlLle~ga~--i~------~k-D~~~qtplHRAAavGklkvie~Li~~~a~--------------- 164 (226)
T KOG4412|consen 109 CLHYAAGKGRLEIAQLLLEKGAL--IR------IK-DKQGQTPLHRAAAVGKLKVIEYLISQGAP--------------- 164 (226)
T ss_pred eehhhhcCChhhHHHHHHhcCCC--Cc------cc-ccccCchhHHHHhccchhhHHHHHhcCCC---------------
Confidence 46688888999999888872211 11 11 23466999999999999999999977511
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-|+.+--|+||||.|-+ +|-.||--+|
T Consensus 165 ---------~n~qDk~G~TpL~~al~-e~~~d~a~lL 191 (226)
T KOG4412|consen 165 ---------LNTQDKYGFTPLHHALA-EGHPDVAVLL 191 (226)
T ss_pred ---------CCcccccCccHHHHHHh-ccCchHHHHH
Confidence 25678899999999933 3555655555
No 19
>PHA02874 ankyrin repeat protein; Provisional
Probab=97.07 E-value=0.0014 Score=73.22 Aligned_cols=78 Identities=22% Similarity=0.255 Sum_probs=42.5
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccc-ccccccc--ccccccCcc--cccc----cCCCCCCCCCCchhhhhcccCCc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEV-SDRLGSE--NKALVDGVH--KGFL----FRPDVIGPAGLTPIHIAAGKDGS 828 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~-~~~~~~~--~~~~v~~~~--~~y~----F~pd~~Gp~GlTPLHIAA~~~gs 828 (851)
+.|+||+|++.+..++|++|+.+.+.-. .+..|.- .-+.-.+.. -.++ -.++..+..|.||||+||.. |.
T Consensus 124 g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~-g~ 202 (434)
T PHA02874 124 LKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEY-GD 202 (434)
T ss_pred CccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CC
Confidence 5688999999999999998887642210 0110000 000000000 0001 13445567778888887776 67
Q ss_pred hhHHHhhh
Q 003063 829 EDVLDALT 836 (851)
Q Consensus 829 ~~vldaLt 836 (851)
.+++..|-
T Consensus 203 ~~iv~~Ll 210 (434)
T PHA02874 203 YACIKLLI 210 (434)
T ss_pred HHHHHHHH
Confidence 77777774
No 20
>PHA02878 ankyrin repeat protein; Provisional
Probab=97.03 E-value=0.00064 Score=76.98 Aligned_cols=54 Identities=22% Similarity=0.222 Sum_probs=43.7
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+.+|||.||+.++.++|++||... .+++..+..|.||||+||.. |..+++..|
T Consensus 36 ~~~tPLh~A~~~g~~e~vk~Ll~~g------------------------advn~~d~~g~TpLh~A~~~-g~~~~v~~L 89 (477)
T PHA02878 36 IPFIPLHQAVEARNLDVVKSLLTRG------------------------HNVNQPDHRDLTPLHIICKE-PNKLGMKEM 89 (477)
T ss_pred cCcchHHHHHHcCCHHHHHHHHHCC------------------------CCCCCCCCCCCCHHHHHHHC-ccHhHHHHH
Confidence 4779999999999999999999652 34567788999999999987 555555555
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=96.95 E-value=0.002 Score=65.88 Aligned_cols=103 Identities=11% Similarity=-0.035 Sum_probs=53.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcC--ChhHHHHHHhccccccc--cccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN--SRPLVDLLLRFVPLEVS--DRLGSENK 794 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~--s~~mVelLl~~~~~~~~--~~~~~~~~ 794 (851)
-|-.|+..+-..+++.|+... ... --.+.||||.|+..+ +.+||++||.....-.. +..+. -
T Consensus 24 pL~~A~~~~~~~~vk~Li~~~---n~~---------~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~--T 89 (209)
T PHA02859 24 PLFYYVEKDDIEGVKKWIKFV---NDC---------NDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNL--S 89 (209)
T ss_pred HHHHHHHhCcHHHHHHHHHhh---hcc---------CccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCC--C
Confidence 456667777777777776521 100 012557778777644 67778777765422110 00000 0
Q ss_pred ccc---c----C--ccc----ccccCCCCCCCCCCchhhhhcc-cCCchhHHHhh
Q 003063 795 ALV---D----G--VHK----GFLFRPDVIGPAGLTPIHIAAG-KDGSEDVLDAL 835 (851)
Q Consensus 795 ~~v---~----~--~~~----~y~F~pd~~Gp~GlTPLHIAA~-~~gs~~vldaL 835 (851)
.+. . + .-- .+.-+++.....|.||||+|+. ..+..+|++.|
T Consensus 90 pLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~L 144 (209)
T PHA02859 90 ALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLL 144 (209)
T ss_pred HHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHH
Confidence 000 0 0 000 0123456667777888887754 34567777777
No 22
>PHA02795 ankyrin-like protein; Provisional
Probab=96.93 E-value=0.0016 Score=74.74 Aligned_cols=60 Identities=23% Similarity=0.239 Sum_probs=48.1
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccC-------Cch
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD-------GSE 829 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~-------gs~ 829 (851)
.+.||||+|+..++.++|++|+... -++++.+..|.||||+||... +..
T Consensus 220 ~G~TpLh~Aa~~g~~eiVelLL~~G------------------------AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~ 275 (437)
T PHA02795 220 GGRTLLYRAIYAGYIDLVSWLLENG------------------------ANVNAVMSNGYTCLDVAVDRGSVIARRETHL 275 (437)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC------------------------CCCCCcCCCCCCHHHHHHHcCCcccccccHH
Confidence 3669999999999999999999763 244677889999999999873 135
Q ss_pred hHHHhhhcCcc
Q 003063 830 DVLDALTDDPG 840 (851)
Q Consensus 830 ~vldaLt~dP~ 840 (851)
+|++.|-+.+.
T Consensus 276 eIvelLL~~ga 286 (437)
T PHA02795 276 KILEILLREPL 286 (437)
T ss_pred HHHHHHHhCCC
Confidence 89999955443
No 23
>PHA02884 ankyrin repeat protein; Provisional
Probab=96.91 E-value=0.0018 Score=70.90 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=42.3
Q ss_pred HhHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 716 fr~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
+..+|-.|+..+-..+++.||. .+.+......++ --.+.||||+|++.++.++|++|+.+.
T Consensus 33 ~~~lL~~A~~~~~~eivk~LL~----~GAdiN~~~~~s-d~~g~TpLh~Aa~~~~~eivklLL~~G 93 (300)
T PHA02884 33 IANILYSSIKFHYTDIIDAILK----LGADPEAPFPLS-ENSKTNPLIYAIDCDNDDAAKLLIRYG 93 (300)
T ss_pred CCHHHHHHHHcCCHHHHHHHHH----CCCCccccCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3457888888888888888776 222322111100 013679999999999999999999875
No 24
>PHA02874 ankyrin repeat protein; Provisional
Probab=96.86 E-value=0.0018 Score=72.44 Aligned_cols=25 Identities=24% Similarity=0.294 Sum_probs=18.1
Q ss_pred CCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 809 DVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 809 d~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+.....|.||||+|+.. + ..++..|
T Consensus 217 ~~~~~~g~TpL~~A~~~-~-~~~i~~L 241 (434)
T PHA02874 217 MNKCKNGFTPLHNAIIH-N-RSAIELL 241 (434)
T ss_pred cCCCCCCCCHHHHHHHC-C-hHHHHHH
Confidence 45567899999999976 3 3455555
No 25
>PHA03095 ankyrin-like protein; Provisional
Probab=96.82 E-value=0.0031 Score=70.30 Aligned_cols=54 Identities=13% Similarity=0.173 Sum_probs=34.6
Q ss_pred HHHHhccCc---hHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcC-ChhHHHHHHhcc
Q 003063 719 LIEFSMDHE---WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN-SRPLVDLLLRFV 781 (851)
Q Consensus 719 LL~Fsverd---WcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~-s~~mVelLl~~~ 781 (851)
.|-+++..+ -..+++.||. -+.+...... .+.||||.|++.+ ..+||++|+.+.
T Consensus 50 ~Lh~a~~~~~~~~~~iv~~Ll~----~Gadin~~~~-----~g~TpLh~A~~~~~~~~iv~lLl~~g 107 (471)
T PHA03095 50 PLHLYLHYSSEKVKDIVRLLLE----AGADVNAPER-----CGFTPLHLYLYNATTLDVIKLLIKAG 107 (471)
T ss_pred HHHHHHHhcCCChHHHHHHHHH----CCCCCCCCCC-----CCCCHHHHHHHcCCcHHHHHHHHHcC
Confidence 444455544 6666766665 2333221111 4779999999999 599999999764
No 26
>PHA02798 ankyrin-like protein; Provisional
Probab=96.81 E-value=0.0021 Score=73.20 Aligned_cols=55 Identities=20% Similarity=0.227 Sum_probs=47.4
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+.||||.||..+..++|++||.+. -++++.+..|.||||+|+.. +..+++..|.
T Consensus 257 ~G~TPL~~A~~~~~~~~v~~LL~~G------------------------Adin~~d~~G~TpL~~A~~~-~~~~iv~~lL 311 (489)
T PHA02798 257 LGFNPLYYSVSHNNRKIFEYLLQLG------------------------GDINIITELGNTCLFTAFEN-ESKFIFNSIL 311 (489)
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC------------------------CcccccCCCCCcHHHHHHHc-CcHHHHHHHH
Confidence 3779999999999999999999763 34678889999999999876 7888988883
No 27
>PHA03100 ankyrin repeat protein; Provisional
Probab=96.68 E-value=0.0038 Score=69.95 Aligned_cols=28 Identities=29% Similarity=0.592 Sum_probs=16.7
Q ss_pred CCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 807 RPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 807 ~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
++++.+..|.||||+|+.. +..+++..|
T Consensus 275 d~n~~d~~g~tpl~~A~~~-~~~~iv~~L 302 (480)
T PHA03100 275 NPNLVNKYGDTPLHIAILN-NNKEIFKLL 302 (480)
T ss_pred CCCccCCCCCcHHHHHHHh-CCHHHHHHH
Confidence 3455566666666666554 556666666
No 28
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=96.67 E-value=0.0014 Score=76.90 Aligned_cols=76 Identities=32% Similarity=0.236 Sum_probs=46.0
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccc-cccccccccc---------cccC-cccccccCCCCCCCCCCchhhhhcccC
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEV-SDRLGSENKA---------LVDG-VHKGFLFRPDVIGPAGLTPIHIAAGKD 826 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~-~~~~~~~~~~---------~v~~-~~~~y~F~pd~~Gp~GlTPLHIAA~~~ 826 (851)
+-+|||||+|+++..||++||..-.+-. -|..|-.-.- +|.= -.++ -++|+.+..|-||||.||-+.
T Consensus 112 ~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~--~d~d~~D~~grTpLmwAaykg 189 (600)
T KOG0509|consen 112 GSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG--ADIDLRDNNGRTPLMWAAYKG 189 (600)
T ss_pred CCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc--ccCCCcCCCCCCHHHHHHHhc
Confidence 4499999999999999999998752211 1222210000 0000 0011 467888888888888888885
Q ss_pred CchhHHHhh
Q 003063 827 GSEDVLDAL 835 (851)
Q Consensus 827 gs~~vldaL 835 (851)
.+.+|.-+|
T Consensus 190 ~~~~v~~LL 198 (600)
T KOG0509|consen 190 FALFVRRLL 198 (600)
T ss_pred ccHHHHHHH
Confidence 555444444
No 29
>PHA03100 ankyrin repeat protein; Provisional
Probab=96.64 E-value=0.0028 Score=70.97 Aligned_cols=84 Identities=24% Similarity=0.313 Sum_probs=62.4
Q ss_pred HHHHhc--cCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcC--ChhHHHHHHhccccccccccccccc
Q 003063 719 LIEFSM--DHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN--SRPLVDLLLRFVPLEVSDRLGSENK 794 (851)
Q Consensus 719 LL~Fsv--erdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~--s~~mVelLl~~~~~~~~~~~~~~~~ 794 (851)
.|-+|+ ..+-..+++.||.. +.+.... -..+.++||.|++.+ ..+||++|+...
T Consensus 109 pL~~A~~~~~~~~~iv~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g------------- 166 (480)
T PHA03100 109 PLLYAISKKSNSYSIVEYLLDN----GANVNIK-----NSDGENLLHLYLESNKIDLKILKLLIDKG------------- 166 (480)
T ss_pred hhhHHHhcccChHHHHHHHHHc----CCCCCcc-----CCCCCcHHHHHHHcCCChHHHHHHHHHCC-------------
Confidence 566777 88888888888862 2221110 123679999999999 999999999763
Q ss_pred ccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 795 ~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. |..++++.|-
T Consensus 167 -----------~din~~d~~g~tpL~~A~~~-~~~~iv~~Ll 196 (480)
T PHA03100 167 -----------VDINAKNRYGYTPLHIAVEK-GNIDVIKFLL 196 (480)
T ss_pred -----------CCcccccCCCCCHHHHHHHh-CCHHHHHHHH
Confidence 23455566899999999988 6999999993
No 30
>PHA02859 ankyrin repeat protein; Provisional
Probab=96.61 E-value=0.0041 Score=63.69 Aligned_cols=56 Identities=14% Similarity=-0.021 Sum_probs=44.4
Q ss_pred hhhhHHHHHHHc--CChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHh
Q 003063 757 TELGLLHRAVRK--NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 834 (851)
Q Consensus 757 ~em~LLH~AVr~--~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vlda 834 (851)
.+.||||.|++. +..++|++|+.+. -+++..+..|.||||+||...+..+|++.
T Consensus 122 ~G~TpLh~a~~~~~~~~~iv~~Li~~g------------------------adin~~d~~g~t~Lh~~a~~~~~~~iv~~ 177 (209)
T PHA02859 122 DGKNLLHMYMCNFNVRINVIKLLIDSG------------------------VSFLNKDFDNNNILYSYILFHSDKKIFDF 177 (209)
T ss_pred CCCCHHHHHHHhccCCHHHHHHHHHcC------------------------CCcccccCCCCcHHHHHHHhcCCHHHHHH
Confidence 467999999874 5789999999763 33456788999999988777788999998
Q ss_pred hh
Q 003063 835 LT 836 (851)
Q Consensus 835 Lt 836 (851)
|-
T Consensus 178 Ll 179 (209)
T PHA02859 178 LT 179 (209)
T ss_pred HH
Confidence 83
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=96.56 E-value=0.0023 Score=71.39 Aligned_cols=54 Identities=17% Similarity=0.149 Sum_probs=46.6
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+.||||+|+..+..++|++||... -+|++....|.||||+|+.. +..+++..|
T Consensus 256 ~g~TpLh~A~~~~~~~~v~~LL~~g------------------------ad~n~~~~~g~tpl~~A~~~-~~~~~v~~L 309 (471)
T PHA03095 256 YGQTPLHYAAVFNNPRACRRLIALG------------------------ADINAVSSDGNTPLSLMVRN-NNGRAVRAA 309 (471)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC------------------------CCCcccCCCCCCHHHHHHHh-CCHHHHHHH
Confidence 4679999999999999999999762 35677788999999999987 788888887
No 32
>PHA02989 ankyrin repeat protein; Provisional
Probab=96.52 E-value=0.0027 Score=72.46 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=49.9
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh-
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL- 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL- 835 (851)
.+.||||.|+..+..++|++||... -++++.+..|.||||+|+.. +..+|++.|
T Consensus 255 ~G~TpL~~Aa~~~~~~~v~~LL~~G------------------------adin~~d~~G~TpL~~A~~~-~~~~iv~~LL 309 (494)
T PHA02989 255 KGFNPLLISAKVDNYEAFNYLLKLG------------------------DDIYNVSKDGDTVLTYAIKH-GNIDMLNRIL 309 (494)
T ss_pred CCCCHHHHHHHhcCHHHHHHHHHcC------------------------CCccccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 4789999999999999999999763 24567788999999999887 788999887
Q ss_pred hcCccc
Q 003063 836 TDDPGM 841 (851)
Q Consensus 836 t~dP~~ 841 (851)
...|..
T Consensus 310 ~~~p~~ 315 (494)
T PHA02989 310 QLKPGK 315 (494)
T ss_pred hcCCCh
Confidence 446643
No 33
>PHA02730 ankyrin-like protein; Provisional
Probab=96.51 E-value=0.0026 Score=76.27 Aligned_cols=55 Identities=22% Similarity=0.234 Sum_probs=44.7
Q ss_pred hhhHHHHHHHcCC---hhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccC-CchhHHH
Q 003063 758 ELGLLHRAVRKNS---RPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD-GSEDVLD 833 (851)
Q Consensus 758 em~LLH~AVr~~s---~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~-gs~~vld 833 (851)
|-|+||+||..++ .+||++||..- -++++.+-.|+||||+||... +..+|+.
T Consensus 41 G~TaLh~A~~~~~~~~~eivklLLs~G------------------------Adin~kD~~G~TPLh~Aa~~~~~~~eIv~ 96 (672)
T PHA02730 41 GNNALHCYVSNKCDTDIKIVRLLLSRG------------------------VERLCRNNEGLTPLGVYSKRKYVKSQIVH 96 (672)
T ss_pred CCcHHHHHHHcCCcCcHHHHHHHHhCC------------------------CCCcccCCCCCChHHHHHHcCCCcHHHHH
Confidence 5699999999974 99999999652 234566889999999988764 4899999
Q ss_pred hhh
Q 003063 834 ALT 836 (851)
Q Consensus 834 aLt 836 (851)
.|-
T Consensus 97 ~Ll 99 (672)
T PHA02730 97 LLI 99 (672)
T ss_pred HHH
Confidence 993
No 34
>PHA02946 ankyin-like protein; Provisional
Probab=96.49 E-value=0.0052 Score=70.08 Aligned_cols=25 Identities=28% Similarity=0.224 Sum_probs=22.6
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
.+.||||+|++.++.++|++||...
T Consensus 71 ~G~TpLh~Aa~~g~~eiv~lLL~~G 95 (446)
T PHA02946 71 DGNYPLHIASKINNNRIVAMLLTHG 95 (446)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCc
Confidence 4779999999999999999999764
No 35
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=96.46 E-value=0.0037 Score=59.89 Aligned_cols=58 Identities=28% Similarity=0.260 Sum_probs=46.0
Q ss_pred hhhhHHHHHHHcCC-----hhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhH
Q 003063 757 TELGLLHRAVRKNS-----RPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 831 (851)
Q Consensus 757 ~em~LLH~AVr~~s-----~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~v 831 (851)
.+.|+||+|+..++ .++|++||..... .-.++..+..|.||||+|+.. |..++
T Consensus 105 ~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~---------------------~~~~~~~~~~g~tpl~~A~~~-~~~~~ 162 (235)
T COG0666 105 DGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD---------------------LDVNNLRDEDGNTPLHWAALN-GDADI 162 (235)
T ss_pred CCCcHHHHHHhcCCcccchHHHHHHHHHcCCC---------------------CCCccccCCCCCchhHHHHHc-CchHH
Confidence 47799999999999 9999999988521 122344588999999999998 55588
Q ss_pred HHhhh
Q 003063 832 LDALT 836 (851)
Q Consensus 832 ldaLt 836 (851)
+.+|-
T Consensus 163 ~~~ll 167 (235)
T COG0666 163 VELLL 167 (235)
T ss_pred HHHHH
Confidence 88773
No 36
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=96.45 E-value=0.0045 Score=75.49 Aligned_cols=52 Identities=23% Similarity=0.300 Sum_probs=41.5
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
++||.||++|+.+||++||.+. -+++..+..|.||||+|+.. |..+++..|-
T Consensus 624 ~~L~~Aa~~g~~~~v~~Ll~~G------------------------adin~~d~~G~TpLh~A~~~-g~~~iv~~Ll 675 (823)
T PLN03192 624 DLLCTAAKRNDLTAMKELLKQG------------------------LNVDSEDHQGATALQVAMAE-DHVDMVRLLI 675 (823)
T ss_pred hHHHHHHHhCCHHHHHHHHHCC------------------------CCCCCCCCCCCCHHHHHHHC-CcHHHHHHHH
Confidence 5777777777777777777552 35677889999999999987 8899999994
No 37
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=96.44 E-value=0.0041 Score=75.86 Aligned_cols=82 Identities=17% Similarity=0.135 Sum_probs=56.3
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccC
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 799 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~ 799 (851)
|-.|+..+=..+++.||. .+.+.... .-.+.|+||.|+++++.++|++||.+.
T Consensus 529 L~~Aa~~g~~~~l~~Ll~----~G~d~n~~-----d~~G~TpLh~Aa~~g~~~~v~~Ll~~g------------------ 581 (823)
T PLN03192 529 LLTVASTGNAALLEELLK----AKLDPDIG-----DSKGRTPLHIAASKGYEDCVLVLLKHA------------------ 581 (823)
T ss_pred HHHHHHcCCHHHHHHHHH----CCCCCCCC-----CCCCCCHHHHHHHcChHHHHHHHHhcC------------------
Confidence 333455666778888775 23332211 123679999999999999999999763
Q ss_pred cccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 800 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 800 ~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+++..+..|.||||.||.. |..+|++.|
T Consensus 582 ------adin~~d~~G~TpL~~A~~~-g~~~iv~~L 610 (823)
T PLN03192 582 ------CNVHIRDANGNTALWNAISA-KHHKIFRIL 610 (823)
T ss_pred ------CCCCCcCCCCCCHHHHHHHh-CCHHHHHHH
Confidence 13455567788888888776 567777766
No 38
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=96.44 E-value=0.0044 Score=53.86 Aligned_cols=47 Identities=26% Similarity=0.383 Sum_probs=39.1
Q ss_pred HHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 762 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 762 LH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
||.||+++..++|++|+...+. .+. |-||||+||.. |..++++.|.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~------------------------~~~----~~~~l~~A~~~-~~~~~~~~Ll~ 47 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD------------------------INL----GNTALHYAAEN-GNLEIVKLLLE 47 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST------------------------TTS----SSBHHHHHHHT-TTHHHHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCC------------------------CCC----CCCHHHHHHHc-CCHHHHHHHHH
Confidence 8999999999999999985311 122 88999999988 79999999944
No 39
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=96.40 E-value=0.0049 Score=73.76 Aligned_cols=83 Identities=22% Similarity=0.262 Sum_probs=61.3
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccC
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 799 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~ 799 (851)
|..++..+=..+++.||. .+.+.... .-.+.|+||+|+..++.++|++||.+.
T Consensus 86 L~~aa~~G~~~~vk~LL~----~Gadin~~-----d~~G~TpLh~Aa~~g~~eiv~~LL~~G------------------ 138 (664)
T PTZ00322 86 LCQLAASGDAVGARILLT----GGADPNCR-----DYDGRTPLHIACANGHVQVVRVLLEFG------------------ 138 (664)
T ss_pred HHHHHHcCCHHHHHHHHH----CCCCCCCc-----CCCCCcHHHHHHHCCCHHHHHHHHHCC------------------
Confidence 445566666677777775 22332211 124679999999999999999999773
Q ss_pred cccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 800 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 800 ~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-++++.+..|.||||+|+.. +..+|+..|-
T Consensus 139 ------advn~~d~~G~TpLh~A~~~-g~~~iv~~Ll 168 (664)
T PTZ00322 139 ------ADPTLLDKDGKTPLELAEEN-GFREVVQLLS 168 (664)
T ss_pred ------CCCCCCCCCCCCHHHHHHHC-CcHHHHHHHH
Confidence 23466788999999999987 7889999983
No 40
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=96.33 E-value=0.0051 Score=77.11 Aligned_cols=52 Identities=33% Similarity=0.409 Sum_probs=34.4
Q ss_pred hhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 759 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 759 m~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-||||.||.++...+|++||.-.-+ ..+.+..|+||||.||.. |..+|+.+|
T Consensus 541 ~TpLh~A~~~g~v~~VkfLLe~gAd------------------------v~ak~~~G~TPLH~Aa~~-G~~~i~~LL 592 (1143)
T KOG4177|consen 541 YTPLHVAVHYGNVDLVKFLLEHGAD------------------------VNAKDKLGYTPLHQAAQQ-GHNDIAELL 592 (1143)
T ss_pred cchHHHHHhcCCchHHHHhhhCCcc------------------------ccccCCCCCChhhHHHHc-ChHHHHHHH
Confidence 3788888888888888888865311 123346666666666666 466666666
No 41
>PHA02946 ankyin-like protein; Provisional
Probab=96.30 E-value=0.0051 Score=70.16 Aligned_cols=80 Identities=21% Similarity=0.184 Sum_probs=63.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
-|-+|+.++...+++.||.. | . .+-|+||+|+..++.+||++|+...
T Consensus 300 pLh~Aa~~g~~eivk~Ll~~---~-~------------~~~t~L~~A~~~~~~~~v~~Ll~~g----------------- 346 (446)
T PHA02946 300 DFKMAVEVGSIRCVKYLLDN---D-I------------ICEDAMYYAVLSEYETMVDYLLFNH----------------- 346 (446)
T ss_pred HHHHHHHcCCHHHHHHHHHC---C-C------------ccccHHHHHHHhCHHHHHHHHHHCC-----------------
Confidence 57889999999999999972 1 1 1348999999999999999999652
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh-hcCcc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL-TDDPG 840 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL-t~dP~ 840 (851)
+.++.. -.|.||||+|+.. +...++.+| .++|.
T Consensus 347 -------a~~n~~-~~G~t~l~~a~~~-~~~~~~~~ll~~~~~ 380 (446)
T PHA02946 347 -------FSVDSV-VNGHTCMSECVRL-NNPVILSKLMLHNPT 380 (446)
T ss_pred -------CCCCCc-cccccHHHHHHHc-CCHHHHHHHHhcCcc
Confidence 335553 4799999999977 788899988 55664
No 42
>PHA02876 ankyrin repeat protein; Provisional
Probab=96.28 E-value=0.0091 Score=70.85 Aligned_cols=84 Identities=19% Similarity=0.313 Sum_probs=60.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
+|..++..+=..+++.||. .+.+.... --.+.||||.||+.|+.++|++||.+.
T Consensus 148 ~l~~~i~~~~~~i~k~Ll~----~Gadvn~~-----d~~G~TpLh~Aa~~G~~~iv~~LL~~G----------------- 201 (682)
T PHA02876 148 LIKERIQQDELLIAEMLLE----GGADVNAK-----DIYCITPIHYAAERGNAKMVNLLLSYG----------------- 201 (682)
T ss_pred HHHHHHHCCcHHHHHHHHh----CCCCCCCC-----CCCCCCHHHHHHHCCCHHHHHHHHHCC-----------------
Confidence 4555666666777777665 33333211 113779999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-+++.....|.||||.|+.. +..+++..|-
T Consensus 202 -------ad~n~~~~~g~t~L~~A~~~-~~~~ivk~Ll 231 (682)
T PHA02876 202 -------ADVNIIALDDLSVLECAVDS-KNIDTIKAII 231 (682)
T ss_pred -------CCcCccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 22345567789999999876 7888888873
No 43
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=96.04 E-value=0.0064 Score=73.02 Aligned_cols=73 Identities=23% Similarity=0.251 Sum_probs=49.6
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCC-CCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPD-VIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd-~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.++||||.|+.+|+.++|++||.....- .. + + ....+.-... ...-.|.||||+||+. ++.+++..|
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv----~~---~---~-~~~~~~~~~~~~~~~~g~tpL~~Aa~~-~~~~iv~lL 194 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASV----PA---R---A-CGDFFVKSQGVDSFYHGESPLNAAACL-GSPSIVALL 194 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCC----Cc---C---c-CCchhhcCCCCCcccccccHHHHHHHh-CCHHHHHHH
Confidence 4789999999999999999999864210 00 0 0 0000111111 0123589999999998 899999999
Q ss_pred hcCccc
Q 003063 836 TDDPGM 841 (851)
Q Consensus 836 t~dP~~ 841 (851)
.++|.-
T Consensus 195 l~~gad 200 (743)
T TIGR00870 195 SEDPAD 200 (743)
T ss_pred hcCCcc
Confidence 888853
No 44
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.95 E-value=0.028 Score=69.40 Aligned_cols=236 Identities=18% Similarity=0.211 Sum_probs=118.1
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCcccceehhcccccCccCccccccceEeeeccCCCCCCCceE
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGF 627 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~GkYL~~e~~~~~~~g~~~~~~~dei~~l~~~~~~P~~~Gr~F 627 (851)
-.|.-++|=+......+.+.|.|+-=.-..--.-|.|++.-...|... +|. ++|-.|. +++|+
T Consensus 405 f~I~DfSP~Wsy~~ggvKVlV~G~~~~~~~~~ysc~Fg~~~VPAeliq---~GV-------------LrC~~P~-h~~G~ 467 (975)
T KOG0520|consen 405 FTITDFSPEWSYLDGGVKVLVTGFPQDETRSNYSCMFGEQRVPAELIQ---EGV-------------LRCYAPP-HEPGV 467 (975)
T ss_pred eeeeccCcccccCCCCcEEEEecCccccCCCceEEEeCCccccHHHhh---cce-------------eeeecCc-cCCCe
Confidence 358899999999999999999998333344456677776555444333 232 2355555 66666
Q ss_pred EE--EecCCCCCCCeeeeecchhHHHHHHHHHHhhhccCc-chh-hhhcccccchhhHHHHHHHHHHhhcccccccccCC
Q 003063 628 IE--IEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRT-DAD-VERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGH 703 (851)
Q Consensus 628 IE--VE~~Glss~~fPvlVa~~~iCsEir~LE~~~~~s~~-~~~-~~~~~~~~~r~qal~FL~ElGWLLqr~~~~~~~~~ 703 (851)
|= |-.+ . +.-+|+|+|.-+-..-++.. +.. ++++ .+ ++.-..+.+--+.+....-.....
T Consensus 468 V~l~V~c~-~----------~~~~~se~ref~~~~~~~~~~d~~s~~d~-~~----~~sl~~rl~~~~~r~~~~~~s~~~ 531 (975)
T KOG0520|consen 468 VNLQVTCR-I----------SGLACSEVREFAYLVQPSQQIDKLSWEDF-LF----QMSLLHRLETMLNRKQSILSSKPS 531 (975)
T ss_pred EEEEEEec-c----------cceeeeeehheeecccCcccccccccccc-hh----hhHHHHHHHHHHHHhHhHhhccCC
Confidence 43 4442 1 23567887765543322211 110 0111 01 111111111111111111001111
Q ss_pred CCCCCCCch---hhhHhHHHHHhccCchHH-HHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHh
Q 003063 704 LDPNTDLFP---LRRFKWLIEFSMDHEWCA-VVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLR 779 (851)
Q Consensus 704 ~~~~~~~f~---i~Rfr~LL~FsverdWcA-VvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~ 779 (851)
++...+.-+ ..|... +++.|.. ++++....+. ++ .-+.+|+|||.|......-+++.|+.
T Consensus 532 ~~n~~~~~~~~l~skv~~-----l~~~~~~r~~~~~~~~~~---------~~--~~~r~~lllhL~a~~lyawLie~~~e 595 (975)
T KOG0520|consen 532 TENTSDAESGNLASKVVH-----LLNEWAYRLLKSISENLS---------SS--VNFRDMLLLHLLAELLYAWLIEKVIE 595 (975)
T ss_pred ccccccccchhHHHHHHH-----HHHHHHHHHHhhHhhhcc---------cc--CCCcchHHHHHHHHHhHHHHHHHHhc
Confidence 111122222 112211 2234443 3333333221 11 13468999999999999999999998
Q ss_pred cccccccccccccccccccC--cc-----cccccCC-----CCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 780 FVPLEVSDRLGSENKALVDG--VH-----KGFLFRP-----DVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 780 ~~~~~~~~~~~~~~~~~v~~--~~-----~~y~F~p-----d~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+. .+....+. .+-+.|.. .. ..++|.. |+++-.||||||+||.. |.+.++++|
T Consensus 596 ~~-~~~~~eld-~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~-G~e~l~a~l 660 (975)
T KOG0520|consen 596 WA-GSGDLELD-RDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFR-GREKLVASL 660 (975)
T ss_pred cc-ccCchhhc-ccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhc-CHHHHHHHH
Confidence 72 00000000 01111111 11 2233433 56789999999999998 888888887
No 45
>PHA02736 Viral ankyrin protein; Provisional
Probab=95.94 E-value=0.0032 Score=60.50 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=42.9
Q ss_pred hhhhHHHHHHHcCChh---HHHHHHhcccccccccccccccccccCcccccccCCCCCC-CCCCchhhhhcccCCchhHH
Q 003063 757 TELGLLHRAVRKNSRP---LVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVL 832 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~---mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~G-p~GlTPLHIAA~~~gs~~vl 832 (851)
.+.++||.||+.++.. +|++|+.+. .+.+... ..|.||||+|+.. +..+++
T Consensus 54 ~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g------------------------adin~~~~~~g~T~Lh~A~~~-~~~~i~ 108 (154)
T PHA02736 54 HGKQCVHIVSNPDKADPQEKLKLLMEWG------------------------ADINGKERVFGNTPLHIAVYT-QNYELA 108 (154)
T ss_pred CCCEEEEeecccCchhHHHHHHHHHHcC------------------------CCccccCCCCCCcHHHHHHHh-CCHHHH
Confidence 3679999999999875 577888663 1234444 4799999999977 788999
Q ss_pred Hhhhc
Q 003063 833 DALTD 837 (851)
Q Consensus 833 daLt~ 837 (851)
..|-.
T Consensus 109 ~~Ll~ 113 (154)
T PHA02736 109 TWLCN 113 (154)
T ss_pred HHHHh
Confidence 98853
No 46
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.84 E-value=0.0077 Score=65.77 Aligned_cols=53 Identities=28% Similarity=0.441 Sum_probs=32.6
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+..|||||++-++..+||.||.-- -|.++.-.+.-||||+||+- |-.||+..|
T Consensus 34 gfsplhwaakegh~aivemll~rg------------------------arvn~tnmgddtplhlaaah-ghrdivqkl 86 (448)
T KOG0195|consen 34 GFSPLHWAAKEGHVAIVEMLLSRG------------------------ARVNSTNMGDDTPLHLAAAH-GHRDIVQKL 86 (448)
T ss_pred CcchhhhhhhcccHHHHHHHHhcc------------------------cccccccCCCCcchhhhhhc-ccHHHHHHH
Confidence 567888888888888888887431 12234445555666666655 555555544
No 47
>PHA02884 ankyrin repeat protein; Provisional
Probab=95.59 E-value=0.015 Score=63.92 Aligned_cols=22 Identities=14% Similarity=0.371 Sum_probs=20.4
Q ss_pred hHHHHHHHcCChhHHHHHHhcc
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~ 781 (851)
+|||.|++.++.++|++||...
T Consensus 35 ~lL~~A~~~~~~eivk~LL~~G 56 (300)
T PHA02884 35 NILYSSIKFHYTDIIDAILKLG 56 (300)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC
Confidence 7899999999999999999875
No 48
>PHA02917 ankyrin-like protein; Provisional
Probab=95.59 E-value=0.026 Score=67.90 Aligned_cols=78 Identities=28% Similarity=0.294 Sum_probs=55.9
Q ss_pred HHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCC
Q 003063 733 KKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG 812 (851)
Q Consensus 733 kkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~G 812 (851)
..++..|+.-+.+.... --.+.||||.|+..+..++|++|+.+. -++++.+
T Consensus 432 ~~~v~~Ll~~GAdIN~k-----d~~G~TpLh~Aa~~~~~~~v~~Ll~~G------------------------Adin~~d 482 (661)
T PHA02917 432 LSTINICLPYLKDINMI-----DKRGETLLHKAVRYNKQSLVSLLLESG------------------------SDVNIRS 482 (661)
T ss_pred HHHHHHHHHCCCCCCCC-----CCCCcCHHHHHHHcCCHHHHHHHHHCc------------------------CCCCCCC
Confidence 34456666644332211 124779999999999999999999773 2456778
Q ss_pred CCCCchhhhhcccCCchhHHHhh-hcCc
Q 003063 813 PAGLTPIHIAAGKDGSEDVLDAL-TDDP 839 (851)
Q Consensus 813 p~GlTPLHIAA~~~gs~~vldaL-t~dP 839 (851)
..|.||||+|+...+..++++.| .+.|
T Consensus 483 ~~G~T~L~~A~~~~~~~~iv~~LL~~ga 510 (661)
T PHA02917 483 NNGYTCIAIAINESRNIELLKMLLCHKP 510 (661)
T ss_pred CCCCCHHHHHHHhCCCHHHHHHHHHcCC
Confidence 89999999999644678888888 4444
No 49
>PHA02989 ankyrin repeat protein; Provisional
Probab=95.52 E-value=0.024 Score=64.82 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=14.3
Q ss_pred hhhHHHHHHHc---CChhHHHHHHhc
Q 003063 758 ELGLLHRAVRK---NSRPLVDLLLRF 780 (851)
Q Consensus 758 em~LLH~AVr~---~s~~mVelLl~~ 780 (851)
+.||||.|+.. ++.+||++||..
T Consensus 108 g~tpL~~a~~~~~~~~~eiv~~Ll~~ 133 (494)
T PHA02989 108 GVSPIVCFIYNSNINNCDMLRFLLSK 133 (494)
T ss_pred CCcHHHHHHHhcccCcHHHHHHHHHC
Confidence 45677766543 456777777754
No 50
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=95.49 E-value=0.028 Score=53.81 Aligned_cols=81 Identities=25% Similarity=0.171 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCccccccc
Q 003063 727 EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLF 806 (851)
Q Consensus 727 dWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F 806 (851)
+...+++.||..-.. . .........+.++||+|+..+...||++||.+.+.
T Consensus 122 ~~~~~~~~ll~~g~~-----~-~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~----------------------- 172 (235)
T COG0666 122 GNIEVAKLLLEAGAD-----L-DVNNLRDEDGNTPLHWAALNGDADIVELLLEAGAD----------------------- 172 (235)
T ss_pred chHHHHHHHHHcCCC-----C-CCccccCCCCCchhHHHHHcCchHHHHHHHhcCCC-----------------------
Confidence 348888888883321 0 01111134578999999999999999999988533
Q ss_pred CCCCCCCCCCchhhhhcccCCchhHHHhhhcC
Q 003063 807 RPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 838 (851)
Q Consensus 807 ~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~d 838 (851)
++.....|.||||+|+.. +..++++.|.++
T Consensus 173 -~~~~~~~g~t~l~~a~~~-~~~~~~~~l~~~ 202 (235)
T COG0666 173 -PNSRNSYGVTALDPAAKN-GRIELVKLLLDK 202 (235)
T ss_pred -CcccccCCCcchhhhccc-chHHHHHHHHhc
Confidence 133378999999999988 788888888653
No 51
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.44 E-value=0.018 Score=62.99 Aligned_cols=92 Identities=23% Similarity=0.226 Sum_probs=65.1
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+++.-+-.||+.+||.-=.. |. +. -+..=++||.|+.-+++++|..||.|+.+
T Consensus 37 plhwaakegh~aivemll~rgar--vn-----~t--nmgddtplhlaaahghrdivqkll~~kad--------------- 92 (448)
T KOG0195|consen 37 PLHWAAKEGHVAIVEMLLSRGAR--VN-----ST--NMGDDTPLHLAAAHGHRDIVQKLLSRKAD--------------- 92 (448)
T ss_pred hhhhhhhcccHHHHHHHHhcccc--cc-----cc--cCCCCcchhhhhhcccHHHHHHHHHHhcc---------------
Confidence 57788888889999988862111 11 11 12233899999999999999999988622
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcCccccee
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVIS 844 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~dP~~vgl 844 (851)
.+++-..|-||||.|+-- |-+-|.+-|-.--.+|+|
T Consensus 93 ---------vnavnehgntplhyacfw-gydqiaedli~~ga~v~i 128 (448)
T KOG0195|consen 93 ---------VNAVNEHGNTPLHYACFW-GYDQIAEDLISCGAAVNI 128 (448)
T ss_pred ---------cchhhccCCCchhhhhhh-cHHHHHHHHHhccceeee
Confidence 246678999999999876 666666655554455554
No 52
>PHA02876 ankyrin repeat protein; Provisional
Probab=95.40 E-value=0.017 Score=68.66 Aligned_cols=79 Identities=20% Similarity=0.123 Sum_probs=52.2
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccc-cccccccccccc----cCcc---cc----cccCCCCCCCCCCchhhhhcc
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEV-SDRLGSENKALV----DGVH---KG----FLFRPDVIGPAGLTPIHIAAG 824 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~-~~~~~~~~~~~v----~~~~---~~----y~F~pd~~Gp~GlTPLHIAA~ 824 (851)
.+.||||.|+.++..++|++|+.+...-. .+..+. ..+. .+.. .. +..+++..+..|.||||+||.
T Consensus 374 ~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~--T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~ 451 (682)
T PHA02876 374 CDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIG--TALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACK 451 (682)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCC--chHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHH
Confidence 47799999999999999999998753311 000000 0000 0000 01 124677789999999999998
Q ss_pred cCCchhHHHhhhc
Q 003063 825 KDGSEDVLDALTD 837 (851)
Q Consensus 825 ~~gs~~vldaLt~ 837 (851)
.....+|++.|-+
T Consensus 452 ~~~~~~iv~lLl~ 464 (682)
T PHA02876 452 KNCKLDVIEMLLD 464 (682)
T ss_pred hCCcHHHHHHHHH
Confidence 7557899999954
No 53
>PHA02798 ankyrin-like protein; Provisional
Probab=95.33 E-value=0.028 Score=64.21 Aligned_cols=75 Identities=8% Similarity=0.181 Sum_probs=51.8
Q ss_pred HHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcC---ChhHHHHHHhcccccccccccccccccccCcccccccCCCC
Q 003063 734 KLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN---SRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDV 810 (851)
Q Consensus 734 kLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~---s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~ 810 (851)
.++..|++.+.+..... -.+.||||.|++.+ ..++|++|+... .++++
T Consensus 90 ~iv~~Ll~~GadiN~~d-----~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G------------------------advn~ 140 (489)
T PHA02798 90 DIVKILIENGADINKKN-----SDGETPLYCLLSNGYINNLEILLFMIENG------------------------ADTTL 140 (489)
T ss_pred HHHHHHHHCCCCCCCCC-----CCcCcHHHHHHHcCCcChHHHHHHHHHcC------------------------CCccc
Confidence 45555555444433211 13679999999874 789999999763 34566
Q ss_pred CCCCCCchhhhhcccCC--chhHHHhhhc
Q 003063 811 IGPAGLTPIHIAAGKDG--SEDVLDALTD 837 (851)
Q Consensus 811 ~Gp~GlTPLHIAA~~~g--s~~vldaLt~ 837 (851)
.+..|.||||+|+.... ..+|++.|-+
T Consensus 141 ~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~ 169 (489)
T PHA02798 141 LDKDGFTMLQVYLQSNHHIDIEIIKLLLE 169 (489)
T ss_pred cCCCCCcHHHHHHHcCCcchHHHHHHHHH
Confidence 78889999999988632 4889998843
No 54
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=95.32 E-value=0.018 Score=72.48 Aligned_cols=94 Identities=23% Similarity=0.266 Sum_probs=73.8
Q ss_pred hhhHhHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccc
Q 003063 713 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 792 (851)
Q Consensus 713 i~Rfr~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~ 792 (851)
..|-+-.|-||++.+=..+|+.||.- ..++.... -.++||||-|+..+..+++++|+++-
T Consensus 537 ~~r~~TpLh~A~~~g~v~~VkfLLe~----gAdv~ak~-----~~G~TPLH~Aa~~G~~~i~~LLlk~G----------- 596 (1143)
T KOG4177|consen 537 TGRGYTPLHVAVHYGNVDLVKFLLEH----GADVNAKD-----KLGYTPLHQAAQQGHNDIAELLLKHG----------- 596 (1143)
T ss_pred cccccchHHHHHhcCCchHHHHhhhC----CccccccC-----CCCCChhhHHHHcChHHHHHHHHHcC-----------
Confidence 34556689999999999999999882 22221111 25899999999999999999999884
Q ss_pred ccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh---hcCcc
Q 003063 793 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL---TDDPG 840 (851)
Q Consensus 793 ~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL---t~dP~ 840 (851)
=.||++..-|-||||||+.. |-.++++.| |.+|+
T Consensus 597 -------------A~vna~d~~g~TpL~iA~~l-g~~~~~k~l~~~~~~~~ 633 (1143)
T KOG4177|consen 597 -------------ASVNAADLDGFTPLHIAVRL-GYLSVVKLLKVVTATPA 633 (1143)
T ss_pred -------------CCCCcccccCcchhHHHHHh-cccchhhHHHhccCccc
Confidence 24688899999999999999 777788877 66653
No 55
>PF13606 Ank_3: Ankyrin repeat
Probab=95.24 E-value=0.017 Score=42.71 Aligned_cols=24 Identities=25% Similarity=0.193 Sum_probs=21.9
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
+.|+||+|++.++.+||++||..-
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC
Confidence 569999999999999999999864
No 56
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=95.21 E-value=0.017 Score=70.53 Aligned_cols=56 Identities=13% Similarity=0.268 Sum_probs=44.5
Q ss_pred hhhhHHHHHHHcCChhHH-----HHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCC----
Q 003063 757 TELGLLHRAVRKNSRPLV-----DLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG---- 827 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mV-----elLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~g---- 827 (851)
.+.||||+||..+...+| ++|+... .++++....|+||||+|+....
T Consensus 496 ~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~G------------------------ADIN~~d~~G~TPLh~A~~~g~~~~~ 551 (764)
T PHA02716 496 SGMTPLHVSIISHTNANIVMDSFVYLLSIQ------------------------YNINIPTKNGVTPLMLTMRNNRLSGH 551 (764)
T ss_pred CCCCHHHHHHHcCCccchhHHHHHHHHhCC------------------------CCCcccCCCCCCHHHHHHHcCCcccc
Confidence 478999999999988655 9999663 4457788999999999998731
Q ss_pred chhHHHhhh
Q 003063 828 SEDVLDALT 836 (851)
Q Consensus 828 s~~vldaLt 836 (851)
..+|+..|-
T Consensus 552 ~~eIvk~LL 560 (764)
T PHA02716 552 QWYIVKNIL 560 (764)
T ss_pred HHHHHHHHH
Confidence 338898883
No 57
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=95.13 E-value=0.036 Score=67.69 Aligned_cols=55 Identities=11% Similarity=0.137 Sum_probs=41.4
Q ss_pred hhhhHHHHHHHcCC--hhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcc--cCCchhHH
Q 003063 757 TELGLLHRAVRKNS--RPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAG--KDGSEDVL 832 (851)
Q Consensus 757 ~em~LLH~AVr~~s--~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~--~~gs~~vl 832 (851)
.+.||||.|++.+. .+||++||.+. -++++....|+||||.|+. ..+..+|+
T Consensus 211 ~G~TPLH~Aa~~g~~~~eIVklLLe~G------------------------ADVN~kD~~G~TPLh~Ai~~a~n~~~EIv 266 (764)
T PHA02716 211 HLITPLHTYLITGNVCASVIKKIIELG------------------------GDMDMKCVNGMSPIMTYIINIDNINPEIT 266 (764)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHcC------------------------CCCCCCCCCCCCHHHHHHHhhhccCHHHH
Confidence 36799999999995 58999999773 2345667889999998753 33566666
Q ss_pred Hhh
Q 003063 833 DAL 835 (851)
Q Consensus 833 daL 835 (851)
+.|
T Consensus 267 kiL 269 (764)
T PHA02716 267 NIY 269 (764)
T ss_pred HHH
Confidence 666
No 58
>PF13606 Ank_3: Ankyrin repeat
Probab=95.02 E-value=0.011 Score=43.64 Aligned_cols=22 Identities=36% Similarity=0.718 Sum_probs=19.9
Q ss_pred CCchhhhhcccCCchhHHHhhhc
Q 003063 815 GLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 815 GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
|+||||+||.. |+.+|++.|-+
T Consensus 2 G~T~Lh~A~~~-g~~e~v~~Ll~ 23 (30)
T PF13606_consen 2 GNTPLHLAASN-GNIEIVKYLLE 23 (30)
T ss_pred CCCHHHHHHHh-CCHHHHHHHHH
Confidence 89999999998 89999999943
No 59
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=95.01 E-value=0.038 Score=48.38 Aligned_cols=25 Identities=28% Similarity=0.189 Sum_probs=20.1
Q ss_pred hhhHHHHHHHcCChhHHHHHHhccc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVP 782 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~ 782 (851)
+.++||.|++.++.++|+.|+...+
T Consensus 7 g~t~l~~a~~~~~~~~i~~li~~~~ 31 (126)
T cd00204 7 GRTPLHLAASNGHLEVVKLLLENGA 31 (126)
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 5688888888888888888887653
No 60
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.99 E-value=0.035 Score=67.34 Aligned_cols=24 Identities=42% Similarity=0.729 Sum_probs=12.6
Q ss_pred CCCCCCchhhhhcccCCchhHHHhh
Q 003063 811 IGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 811 ~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+-.|-||||+|| ..|..+|+..|
T Consensus 337 ~D~~g~tpLHlaa-~~gH~~v~qlL 360 (929)
T KOG0510|consen 337 SDLHGMTPLHLAA-KSGHDRVVQLL 360 (929)
T ss_pred ccccCCCchhhhh-hcCHHHHHHHH
Confidence 3455555555555 33555555555
No 61
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=94.95 E-value=0.021 Score=42.19 Aligned_cols=24 Identities=29% Similarity=0.339 Sum_probs=22.0
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
+.||||+|+.+++.++|++||...
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~g 25 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHG 25 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCc
Confidence 579999999999999999999854
No 62
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=94.81 E-value=0.042 Score=64.97 Aligned_cols=104 Identities=27% Similarity=0.298 Sum_probs=53.2
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccc-cccccccccccccc
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE-VSDRLGSENKALVD 798 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~-~~~~~~~~~~~~v~ 798 (851)
|-+|..++-..|+..||.-=++ .++ ....|.++||.||..++..+|-.||....+. ..|..|-- ..+..
T Consensus 116 LHWAar~G~~~vv~lLlqhGAd--------pt~-~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grT-pLmwA 185 (600)
T KOG0509|consen 116 LHWAARNGHISVVDLLLQHGAD--------PTL-KDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRT-PLMWA 185 (600)
T ss_pred chHHHHcCcHHHHHHHHHcCCC--------Cce-ecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCC-HHHHH
Confidence 3567778888888877762111 112 1223556666666666666666555432111 11111100 00000
Q ss_pred Cccccc--------ccCCC--CC-CCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGF--------LFRPD--VI-GPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y--------~F~pd--~~-Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+.+++ .|.++ .. +-.|-||||+|+.. |+..++.+|
T Consensus 186 -aykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~-gN~~~v~Ll 231 (600)
T KOG0509|consen 186 -AYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVG-GNLTAVKLL 231 (600)
T ss_pred -HHhcccHHHHHHHHhcccccccccccCCchHHHHHhc-CCcceEehh
Confidence 01111 12222 22 48899999999988 777777755
No 63
>PHA02795 ankyrin-like protein; Provisional
Probab=94.60 E-value=0.073 Score=61.45 Aligned_cols=28 Identities=21% Similarity=0.141 Sum_probs=23.7
Q ss_pred CCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 808 PDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 808 pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+..+..|.||||+||.. |..+++..|-
T Consensus 214 IN~kD~~G~TpLh~Aa~~-g~~eiVelLL 241 (437)
T PHA02795 214 INQLDAGGRTLLYRAIYA-GYIDLVSWLL 241 (437)
T ss_pred cCcCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 356688999999999987 8999999983
No 64
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=94.53 E-value=0.061 Score=47.08 Aligned_cols=85 Identities=27% Similarity=0.253 Sum_probs=53.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.|+..-... ...-..+-++||.|+..+..+++++|+.+.+
T Consensus 10 ~l~~a~~~~~~~~i~~li~~~~~~---------~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~---------------- 64 (126)
T cd00204 10 PLHLAASNGHLEVVKLLLENGADV---------NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA---------------- 64 (126)
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCC---------CccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----------------
Confidence 566677777776666655422211 0011234488888888888888888887642
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.++.....|.||||+|+.. +..+++..|.+
T Consensus 65 --------~~~~~~~~~~~~l~~a~~~-~~~~~~~~L~~ 94 (126)
T cd00204 65 --------DVNARDKDGNTPLHLAARN-GNLDVVKLLLK 94 (126)
T ss_pred --------CccccCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 1223345677888888776 45777777743
No 65
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=94.46 E-value=0.019 Score=42.43 Aligned_cols=22 Identities=41% Similarity=0.702 Sum_probs=19.6
Q ss_pred CCchhhhhcccCCchhHHHhhhc
Q 003063 815 GLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 815 GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
|.||||+||.. |..+|+..|-.
T Consensus 2 G~TpLh~A~~~-~~~~~v~~Ll~ 23 (33)
T PF00023_consen 2 GNTPLHYAAQR-GHPDIVKLLLK 23 (33)
T ss_dssp SBBHHHHHHHT-TCHHHHHHHHH
T ss_pred cccHHHHHHHH-HHHHHHHHHHH
Confidence 89999999998 79999999843
No 66
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.33 E-value=0.045 Score=66.37 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHhhcccccccccCCCCCCCCCchhhhHhHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhh
Q 003063 680 QAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTEL 759 (851)
Q Consensus 680 qal~FL~ElGWLLqr~~~~~~~~~~~~~~~~f~i~Rfr~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em 759 (851)
++++.|.-.|--++-+. .-+ ...|-||.--+--..++.||. -.++ .-..+..+.+|
T Consensus 287 ~svd~Ll~~Ga~I~~kn---~d~--------------~spLH~AA~yg~~ntv~rLL~--~~~~-----rllne~D~~g~ 342 (929)
T KOG0510|consen 287 ESVDNLLGFGASINSKN---KDE--------------ESPLHFAAIYGRINTVERLLQ--ESDT-----RLLNESDLHGM 342 (929)
T ss_pred hHHHHHHHcCCcccccC---CCC--------------CCchHHHHHcccHHHHHHHHh--CcCc-----cccccccccCC
Confidence 56777777775544442 111 125666666666666788887 2222 22222356799
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcCc
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDP 839 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~dP 839 (851)
+|||.|++.++-..|++||.+--... . .+ -++-.|.||||+||-. |..-.+..|-..=
T Consensus 343 tpLHlaa~~gH~~v~qlLl~~GA~~~-------------~--~~------e~D~dg~TaLH~Aa~~-g~~~av~~Li~~G 400 (929)
T KOG0510|consen 343 TPLHLAAKSGHDRVVQLLLNKGALFL-------------N--MS------EADSDGNTALHLAAKY-GNTSAVQKLISHG 400 (929)
T ss_pred CchhhhhhcCHHHHHHHHHhcChhhh-------------c--cc------ccccCCchhhhHHHHh-ccHHHHHHHHHcC
Confidence 99999999999999999998752211 0 00 1277899999999977 8888888774443
Q ss_pred ccce
Q 003063 840 GMVI 843 (851)
Q Consensus 840 ~~vg 843 (851)
.-||
T Consensus 401 a~I~ 404 (929)
T KOG0510|consen 401 ADIG 404 (929)
T ss_pred Ccee
Confidence 4443
No 67
>PHA02917 ankyrin-like protein; Provisional
Probab=93.99 E-value=0.14 Score=61.69 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=58.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhc-c-ccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDG-T-VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g-~-v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~ 796 (851)
-|-+|...+...|++.+...|.+. + +..-+ .-.++|+|+..+..+||++|+..
T Consensus 71 pL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~---------~~~~~~~a~~~~~~e~vk~Ll~~---------------- 125 (661)
T PHA02917 71 PLEEYTNSRHVKVNKDIAMALLEATGYSNIND---------FNIFSYMKSKNVDVDLIKVLVEH---------------- 125 (661)
T ss_pred HHHHHHHcCChhHHHHHHHHHHhccCCCCCCC---------cchHHHHHhhcCCHHHHHHHHHc----------------
Confidence 344455556666777666666642 1 22211 11567889999999999999965
Q ss_pred ccCcccccccCCCCCCCCCCchhhhhc-ccCCchhHHHhh
Q 003063 797 VDGVHKGFLFRPDVIGPAGLTPIHIAA-GKDGSEDVLDAL 835 (851)
Q Consensus 797 v~~~~~~y~F~pd~~Gp~GlTPLHIAA-~~~gs~~vldaL 835 (851)
..++++.+-.|.||||+|+ ...|..+|++.|
T Consensus 126 --------Gadin~~d~~g~T~L~~~~a~~~~~~eivklL 157 (661)
T PHA02917 126 --------GFDLSVKCENHRSVIENYVMTDDPVPEIIDLF 157 (661)
T ss_pred --------CCCCCccCCCCccHHHHHHHccCCCHHHHHHH
Confidence 3566777889999999865 456899999999
No 68
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=93.59 E-value=0.056 Score=57.59 Aligned_cols=54 Identities=26% Similarity=0.353 Sum_probs=38.2
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+.|+|-||.+++..+.|+|||.+- =+||+.|..--|.|.+|... |-.||+.+|
T Consensus 159 ~GfTpLiWAaa~G~i~vV~fLL~~G------------------------Adp~~lgk~resALsLAt~g-gytdiV~lL 212 (296)
T KOG0502|consen 159 FGFTPLIWAAAKGHIPVVQFLLNSG------------------------ADPDALGKYRESALSLATRG-GYTDIVELL 212 (296)
T ss_pred cCchHhHHHHhcCchHHHHHHHHcC------------------------CChhhhhhhhhhhHhHHhcC-ChHHHHHHH
Confidence 3679999999999999999999874 23455555555555555444 555555555
No 69
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=93.51 E-value=0.18 Score=55.59 Aligned_cols=82 Identities=28% Similarity=0.299 Sum_probs=57.1
Q ss_pred ccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccc
Q 003063 724 MDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG 803 (851)
Q Consensus 724 verdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~ 803 (851)
++.+=..-+++||...-. |. ...-++|++|--|.-++.+.||++||+..-+ |+
T Consensus 20 i~Kndt~~a~~LLs~vr~--vn-------~~D~sGMs~LahAaykGnl~~v~lll~~gaD-------------vN----- 72 (396)
T KOG1710|consen 20 IDKNDTEAALALLSTVRQ--VN-------QRDPSGMSVLAHAAYKGNLTLVELLLELGAD-------------VN----- 72 (396)
T ss_pred HccCcHHHHHHHHHHhhh--hh-------ccCCCcccHHHHHHhcCcHHHHHHHHHhCCC-------------cC-----
Confidence 555555556666664321 11 0123689999999999999999999987522 11
Q ss_pred cccCCCCCCCCCCchhhhhcccCCchhHHHhhhcC
Q 003063 804 FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 838 (851)
Q Consensus 804 y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~d 838 (851)
+-....+.||||.||-- |+-||--+|-+.
T Consensus 73 -----~~qhg~~YTpLmFAALS-Gn~dvcrlllda 101 (396)
T KOG1710|consen 73 -----DKQHGTLYTPLMFAALS-GNQDVCRLLLDA 101 (396)
T ss_pred -----cccccccccHHHHHHHc-CCchHHHHHHhc
Confidence 22356789999999865 999998888654
No 70
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=92.74 E-value=0.16 Score=41.10 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=35.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHH
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLL 778 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl 778 (851)
+|-+|+..+-..+++.|+.. +++.... --.+.|+||.||.++..++|++||
T Consensus 4 ~lh~A~~~g~~~~~~~Ll~~----~~din~~-----d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 4 PLHWAARSGNLEIVKLLLEH----GADINAQ-----DEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHHHHHTT-HHHHHHHHHT----TSGTT-B------TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHC----CCCCCCC-----CCCCCCHHHHHHHccCHHHHHHHC
Confidence 57788889999999888862 2332211 124789999999999999999997
No 71
>PHA02730 ankyrin-like protein; Provisional
Probab=92.09 E-value=0.18 Score=60.99 Aligned_cols=59 Identities=20% Similarity=0.209 Sum_probs=46.1
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCC-CCCchhhhhccc-CCchhHHHh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGK-DGSEDVLDA 834 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp-~GlTPLHIAA~~-~gs~~vlda 834 (851)
.|.||||.|+..+..++|++|+.+.. ++++.+. .|.||||.||.. .+..+|++.
T Consensus 461 ~G~TPLh~Aa~~~~~eive~LI~~GA------------------------dIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~ 516 (672)
T PHA02730 461 ENKTLLYYAVDVNNIQFARRLLEYGA------------------------SVNTTSRSIINTAIQKSSYRRENKTKLVDL 516 (672)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCC------------------------CCCCCCCcCCcCHHHHHHHhhcCcHHHHHH
Confidence 36799999999999999999997741 2334453 689999999975 367889999
Q ss_pred h-hcCc
Q 003063 835 L-TDDP 839 (851)
Q Consensus 835 L-t~dP 839 (851)
| .+.|
T Consensus 517 LLs~ga 522 (672)
T PHA02730 517 LLSYHP 522 (672)
T ss_pred HHHcCC
Confidence 8 4444
No 72
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=91.77 E-value=0.31 Score=59.40 Aligned_cols=67 Identities=27% Similarity=0.290 Sum_probs=54.0
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCC------------CCchhhhhcc
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPA------------GLTPIHIAAG 824 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~------------GlTPLHIAA~ 824 (851)
.|-++||.|+-+.+.+||.+||.-..+ |.....|=-|.|+-...+ |-.||-.|||
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gAD-------------V~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC 249 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGAD-------------VHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAAC 249 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCc-------------hhhHhhccccCcccccccccccCCcceeeeccCchHHHHH
Confidence 456999999999999999999975421 333445556999876677 8999999999
Q ss_pred cCCchhHHHhhhc
Q 003063 825 KDGSEDVLDALTD 837 (851)
Q Consensus 825 ~~gs~~vldaLt~ 837 (851)
+ +.++|++.|..
T Consensus 250 ~-nq~eivrlLl~ 261 (782)
T KOG3676|consen 250 T-NQPEIVRLLLA 261 (782)
T ss_pred c-CCHHHHHHHHh
Confidence 9 79999999943
No 73
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=91.73 E-value=0.083 Score=43.56 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=19.9
Q ss_pred CCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 807 RPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 807 ~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.++..+..|-||||+||.. |..+++..|-+
T Consensus 8 ~~n~~d~~G~T~LH~A~~~-g~~~~v~~Ll~ 37 (56)
T PF13857_consen 8 DVNAQDKYGNTPLHWAARY-GHSEVVRLLLQ 37 (56)
T ss_dssp -TT---TTS--HHHHHHHH-T-HHHHHHHHH
T ss_pred CCcCcCCCCCcHHHHHHHc-CcHHHHHHHHH
Confidence 4567789999999999996 89999999953
No 74
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=91.67 E-value=0.21 Score=60.24 Aligned_cols=52 Identities=25% Similarity=0.249 Sum_probs=43.5
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
..||.|+..|..++|++||... .+++..+..|.||||+||.. |..+|+..|-
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~G------------------------adin~~d~~G~TpLh~Aa~~-g~~eiv~~LL 135 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGG------------------------ADPNCRDYDGRTPLHIACAN-GHVQVVRVLL 135 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC------------------------CCCCCcCCCCCcHHHHHHHC-CCHHHHHHHH
Confidence 4589999999999999999653 23466678899999999987 8999999984
No 75
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=91.36 E-value=0.19 Score=58.73 Aligned_cols=54 Identities=26% Similarity=0.374 Sum_probs=43.7
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.++|.||-|+--....||.+|+.|.-. + +..+--||||||.||+- |-.+|+.-|
T Consensus 72 DglTalhq~~id~~~e~v~~l~e~ga~---------------------V---n~~d~e~wtPlhaaasc-g~~~i~~~l 125 (527)
T KOG0505|consen 72 DGLTALHQACIDDNLEMVKFLVENGAN---------------------V---NAQDNEGWTPLHAAASC-GYLNIVEYL 125 (527)
T ss_pred ccchhHHHHHhcccHHHHHHHHHhcCC---------------------c---cccccccCCcchhhccc-ccHHHHHHH
Confidence 578999999999999999999988511 1 34477899999999886 777776655
No 76
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=90.63 E-value=0.21 Score=58.44 Aligned_cols=52 Identities=31% Similarity=0.383 Sum_probs=44.4
Q ss_pred hhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 759 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 759 m~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-|+||.|..++.....+|||.. .+.+++.+--||||||-||.- |-+++...|
T Consensus 199 ~T~lHvAaa~Gy~e~~~lLl~a------------------------g~~~~~~D~dgWtPlHAAA~W-g~~~~~elL 250 (527)
T KOG0505|consen 199 ATALHVAAANGYTEVAALLLQA------------------------GYSVNIKDYDGWTPLHAAAHW-GQEDACELL 250 (527)
T ss_pred chHHHHHHhhhHHHHHHHHHHh------------------------ccCcccccccCCCcccHHHHh-hhHhHHHHH
Confidence 4999999999999999999975 356678888999999999987 777777665
No 77
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=90.53 E-value=0.29 Score=59.18 Aligned_cols=21 Identities=29% Similarity=0.466 Sum_probs=14.5
Q ss_pred hHHH-HHHHcCChhHHHHHHhc
Q 003063 760 GLLH-RAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 760 ~LLH-~AVr~~s~~mVelLl~~ 780 (851)
++|| .|++.+..+||++|+.+
T Consensus 54 t~Lh~~A~~~~~~eiv~lLl~~ 75 (743)
T TIGR00870 54 SALFVAAIENENLELTELLLNL 75 (743)
T ss_pred hHHHHHHHhcChHHHHHHHHhC
Confidence 5677 67777777777777754
No 78
>PHA02792 ankyrin-like protein; Provisional
Probab=90.46 E-value=0.48 Score=57.14 Aligned_cols=43 Identities=21% Similarity=0.160 Sum_probs=36.5
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAG 824 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~ 824 (851)
+.||||.|++.++.++|++|+.... +++..+..|.||||+|+.
T Consensus 410 G~TPLh~Aa~~~n~eivelLLs~GA------------------------DIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 410 GRSILYYCIESHSVSLVEWLIDNGA------------------------DINITTKYGSTCIGICVI 452 (631)
T ss_pred CcchHHHHHHcCCHHHHHHHHHCCC------------------------CCCCcCCCCCCHHHHHHH
Confidence 5699999999999999999997631 245668889999999986
No 79
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=88.29 E-value=0.9 Score=48.82 Aligned_cols=83 Identities=24% Similarity=0.217 Sum_probs=59.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
-|++|-.++=..|++.||+ .|.-..+=..-+| +.|..|.+.|-.++|+|||.--|+
T Consensus 163 pLiWAaa~G~i~vV~fLL~--------~GAdp~~lgk~re-sALsLAt~ggytdiV~lLL~r~vd--------------- 218 (296)
T KOG0502|consen 163 PLIWAAAKGHIPVVQFLLN--------SGADPDALGKYRE-SALSLATRGGYTDIVELLLTREVD--------------- 218 (296)
T ss_pred HhHHHHhcCchHHHHHHHH--------cCCChhhhhhhhh-hhHhHHhcCChHHHHHHHHhcCCC---------------
Confidence 4677788888999999998 3322222122345 899999999999999999965433
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.++.+=.|.|||-.|+-- +-.+++++|
T Consensus 219 ---------VNvyDwNGgTpLlyAvrg-nhvkcve~L 245 (296)
T KOG0502|consen 219 ---------VNVYDWNGGTPLLYAVRG-NHVKCVESL 245 (296)
T ss_pred ---------cceeccCCCceeeeeecC-ChHHHHHHH
Confidence 134466788998887754 677788887
No 80
>PHA02792 ankyrin-like protein; Provisional
Probab=88.14 E-value=0.57 Score=56.51 Aligned_cols=58 Identities=16% Similarity=0.085 Sum_probs=45.2
Q ss_pred hhhHHHHHHHcC-------ChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCC-ch
Q 003063 758 ELGLLHRAVRKN-------SRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG-SE 829 (851)
Q Consensus 758 em~LLH~AVr~~-------s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~g-s~ 829 (851)
+-|+||.||..+ +.+++++|+..-.. +...+-.|-||||+|+.... ..
T Consensus 175 g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~------------------------~~~~d~~g~t~l~~~~~~~~i~~ 230 (631)
T PHA02792 175 GKTVLYYYIITRSQDGYATSLDVINYLISHEKE------------------------MRYYTYREHTTLYYYVDKCDIKR 230 (631)
T ss_pred CCchHHHHHhhCCcccccCCHHHHHHHHhCCCC------------------------cCccCCCCChHHHHHHHcccchH
Confidence 559999999999 89999999976311 11224459999999999863 67
Q ss_pred hHHHhhhcCc
Q 003063 830 DVLDALTDDP 839 (851)
Q Consensus 830 ~vldaLt~dP 839 (851)
+|+|+|.++|
T Consensus 231 ei~~~L~~~~ 240 (631)
T PHA02792 231 EIFDALFDSN 240 (631)
T ss_pred HHHHHHHhcc
Confidence 8999997754
No 81
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=87.48 E-value=0.52 Score=57.34 Aligned_cols=88 Identities=26% Similarity=0.288 Sum_probs=54.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHH-HhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLA-LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~-l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
+|.-|+=++=..+++.||+- ...+++. ..+|.+||.|...+..++|.+||.-. +
T Consensus 52 alhha~Lng~~~is~llle~----------ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~-d-------------- 106 (854)
T KOG0507|consen 52 LLHHAVLNGQNQISKLLLDY----------EALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQT-D-------------- 106 (854)
T ss_pred HHHHHHhcCchHHHHHHhcc----------hhhhhhhhccCcceEEehhhcCcchHHHHHHhcc-c--------------
Confidence 55666666666777766651 1223332 24788888888888888888887443 0
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh-h--cCccc
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL-T--DDPGM 841 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL-t--~dP~~ 841 (851)
-+++.--.|.||||+||+- |--||+-.| + -||.+
T Consensus 107 ---------~~na~~~e~~tplhlaaqh-gh~dvv~~Ll~~~adp~i 143 (854)
T KOG0507|consen 107 ---------ILNAVNIENETPLHLAAQH-GHLEVVFYLLKKNADPFI 143 (854)
T ss_pred ---------CCCcccccCcCccchhhhh-cchHHHHHHHhcCCCccc
Confidence 0133445678888888887 556666666 2 26654
No 82
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=85.27 E-value=1.5 Score=54.04 Aligned_cols=61 Identities=31% Similarity=0.356 Sum_probs=45.1
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
..|-.|++.+.++.||+||.+.-. ..+....++..+..|.||+ |||.+||-. .+-+||..|
T Consensus 90 dALL~aI~~~~v~~VE~ll~~~~~--------~~~~~~~~d~~~~~ft~di------tPliLAAh~-NnyEil~~L 150 (822)
T KOG3609|consen 90 DALLLAIAVGSVPLVELLLVHFVD--------APYLERSGDANSPHFTPDI------TPLMLAAHL-NNFEILQCL 150 (822)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccc--------cchhccccccCcccCCCCc------cHHHHHHHh-cchHHHHHH
Confidence 456679999999999999976411 1112224566677888865 999999999 688999988
No 83
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=84.24 E-value=1.8 Score=51.12 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=53.5
Q ss_pred ccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccc
Q 003063 724 MDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG 803 (851)
Q Consensus 724 verdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~ 803 (851)
+..+|-.+.+-++.- ..+.++-.+ ..+=||||.||+-+...-+++||+-.-.
T Consensus 29 ~~~~~~sl~~el~~~-~~~~id~~D-------~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-------------------- 80 (560)
T KOG0522|consen 29 VTTDSDSLEQELLAK-VSLVIDRRD-------PPGRTPLHLAVRLGHVEAARILLSAGAD-------------------- 80 (560)
T ss_pred hccchhhHHHHHhhh-hhceecccc-------CCCCccHHHHHHhcCHHHHHHHHhcCCC--------------------
Confidence 346777777777776 444454332 1223999999999999999999975310
Q ss_pred cccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 804 FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 804 y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.-..-..||||||-|++. |.+.++-++
T Consensus 81 ----v~~kN~~gWs~L~EAv~~-g~~q~i~~v 107 (560)
T KOG0522|consen 81 ----VSIKNNEGWSPLHEAVST-GNEQIITEV 107 (560)
T ss_pred ----ccccccccccHHHHHHHc-CCHHHHHHH
Confidence 012246899999999999 555444443
No 84
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=82.92 E-value=1.4 Score=28.20 Aligned_cols=24 Identities=29% Similarity=0.203 Sum_probs=21.5
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
+.++||+|+..+..++|++|+.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 358999999999999999999875
No 85
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=82.36 E-value=1.7 Score=45.34 Aligned_cols=53 Identities=32% Similarity=0.319 Sum_probs=36.6
Q ss_pred hhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 759 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 759 m~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+.++-||+..|....|.-||.-++.-. +..+..|.||||-||-. |-.||++.|
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~v-----------------------NtrD~D~YTpLHRAaYn-~h~div~~l 116 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANHV-----------------------NTRDEDEYTPLHRAAYN-GHLDIVHEL 116 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhccccc-----------------------cccccccccHHHHHHhc-CchHHHHHH
Confidence 468899999999999999997664421 34455566666665554 555666555
No 86
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=81.20 E-value=1.1 Score=52.36 Aligned_cols=108 Identities=25% Similarity=0.243 Sum_probs=68.3
Q ss_pred HhccCchHHHHHHHHHHHHh-----ccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccc----c
Q 003063 722 FSMDHEWCAVVKKLLHILLD-----GTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGS----E 792 (851)
Q Consensus 722 FsverdWcAVvkkLL~~l~~-----g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~----~ 792 (851)
.|..++-..|++.||.---. |+|..+ .+. ..+-.+|-.|+..++.++|.+|++.. ....+.+-. -
T Consensus 48 iaaRnGH~~vVeyLle~~~a~~e~~GsV~FD-ge~----IegappLWaAsaAGHl~vVk~L~~~g-a~VN~tT~TNStPL 121 (615)
T KOG0508|consen 48 IAARNGHADVVEYLLEHCRASPEQGGSVRFD-GET----IEGAPPLWAASAAGHLEVVKLLLRRG-ASVNDTTRTNSTPL 121 (615)
T ss_pred eehhcCcHHHHHHHHHHhcCCccCCceEEeC-Ccc----cCCCchhhHHhccCcHHHHHHHHHhc-CccccccccCCccH
Confidence 34577888899999985422 222211 122 23568888888899999999999865 222111111 1
Q ss_pred ccccccC--ccccc----ccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 793 NKALVDG--VHKGF----LFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 793 ~~~~v~~--~~~~y----~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
..+-+|| +-..| .|+|.++..-|-|-|||||.+ |..||...|-
T Consensus 122 raACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~yk-Gh~~I~qyLl 170 (615)
T KOG0508|consen 122 RAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYK-GHVDIAQYLL 170 (615)
T ss_pred HHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeecc-CchHHHHHHH
Confidence 1122233 12223 378889899999999999887 8888888773
No 87
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=80.81 E-value=1.5 Score=51.42 Aligned_cols=80 Identities=28% Similarity=0.357 Sum_probs=54.6
Q ss_pred hccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCccc
Q 003063 723 SMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHK 802 (851)
Q Consensus 723 sverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~ 802 (851)
|+-++=.-|++-||..=++ |. .. .-.+=|.||.|.-+++.++|.+||.|...
T Consensus 157 a~ykGh~~I~qyLle~gAD--vn----~k---s~kGNTALH~caEsG~vdivq~Ll~~ga~------------------- 208 (615)
T KOG0508|consen 157 ACYKGHVDIAQYLLEQGAD--VN----AK---SYKGNTALHDCAESGSVDIVQLLLKHGAK------------------- 208 (615)
T ss_pred eeccCchHHHHHHHHhCCC--cc----hh---cccCchHHHhhhhcccHHHHHHHHhCCce-------------------
Confidence 4445555666666652211 11 10 11356999999999999999999988521
Q ss_pred ccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 803 GFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 803 ~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
-|+.| -|.|||..||-. |--+||+.|.+
T Consensus 209 -----i~~d~-~GmtPL~~Aa~t-G~~~iVe~L~~ 236 (615)
T KOG0508|consen 209 -----IDVDG-HGMTPLLLAAVT-GHTDIVERLLQ 236 (615)
T ss_pred -----eeecC-CCCchHHHHhhh-cchHHHHHHhc
Confidence 14434 499999988776 88999999865
No 88
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=80.69 E-value=1 Score=54.97 Aligned_cols=54 Identities=31% Similarity=0.560 Sum_probs=45.8
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+.|+||-||-++...++.||+.|-+. -|+-+--|.+|||+||-. |.-++++.|
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~------------------------ldl~d~kg~~plhlaaw~-g~~e~vkml 101 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEAL------------------------LDLCDTKGILPLHLAAWN-GNLEIVKML 101 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhh------------------------hhhhhccCcceEEehhhc-CcchHHHHH
Confidence 688999999999999999999988532 134457899999999998 788888877
No 89
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=80.52 E-value=0.81 Score=54.13 Aligned_cols=54 Identities=30% Similarity=0.393 Sum_probs=44.7
Q ss_pred hhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 759 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 759 m~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+|||.||+-++.++|..+|...|... -|+++..|-|.||-||+. ++..|-..|
T Consensus 900 ~sllh~a~~tg~~eivkyildh~p~el----------------------ld~~de~get~lhkaa~~-~~r~vc~~l 953 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNGEIVKYILDHGPSEL----------------------LDMADETGETALHKAACQ-RNRAVCQLL 953 (1004)
T ss_pred hhHHHHHHhcCChHHHHHHHhcCCHHH----------------------HHHHhhhhhHHHHHHHHh-cchHHHHHH
Confidence 489999999999999999999887631 156778999999999998 566665555
No 90
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=79.14 E-value=7.5 Score=34.43 Aligned_cols=40 Identities=30% Similarity=0.462 Sum_probs=35.5
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCc
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGK 587 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~Gk 587 (851)
|+|..++|..-.....+.+.++|.||.....++-|.+.|.
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~~~~~V~ig~~ 40 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSGSPRVRVTVGGV 40 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCCCceEEEEECCE
Confidence 7899999999999999999999999999877788888663
No 91
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=78.62 E-value=4.7 Score=46.11 Aligned_cols=59 Identities=22% Similarity=0.227 Sum_probs=48.0
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+-|.|..||+-+...||++||.-- =+.++.+--|-|.||.||-- |-.+|++.|--
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacg------------------------AdVNiQDdDGSTALMCA~EH-GhkEivklLLA 394 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACG------------------------ADVNIQDDDGSTALMCAAEH-GHKEIVKLLLA 394 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHcc------------------------CCCccccCCccHHHhhhhhh-ChHHHHHHHhc
Confidence 559999999999999999999653 12356688899999998876 89999999966
Q ss_pred Cccc
Q 003063 838 DPGM 841 (851)
Q Consensus 838 dP~~ 841 (851)
-|.-
T Consensus 395 ~p~c 398 (452)
T KOG0514|consen 395 VPSC 398 (452)
T ss_pred cCcc
Confidence 6643
No 92
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=74.64 E-value=3.2 Score=39.66 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=40.1
Q ss_pred HHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHh
Q 003063 755 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 834 (851)
Q Consensus 755 ~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vlda 834 (851)
.+.+-+|||.|+-.+..+++|+|++--.+ + +..+--|+|||- +|.-.|-.+-++.
T Consensus 31 ~~ggR~plhyAAD~GQl~ilefli~iGA~---------------------i---~~kDKygITPLL-sAvwEGH~~cVkl 85 (117)
T KOG4214|consen 31 IYGGRTPLHYAADYGQLSILEFLISIGAN---------------------I---QDKDKYGITPLL-SAVWEGHRDCVKL 85 (117)
T ss_pred HhCCcccchHhhhcchHHHHHHHHHhccc---------------------c---CCccccCCcHHH-HHHHHhhHHHHHH
Confidence 44667899999999999999999865311 1 233567889984 5555577777777
Q ss_pred h
Q 003063 835 L 835 (851)
Q Consensus 835 L 835 (851)
|
T Consensus 86 L 86 (117)
T KOG4214|consen 86 L 86 (117)
T ss_pred H
Confidence 7
No 93
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=73.40 E-value=14 Score=32.05 Aligned_cols=38 Identities=26% Similarity=0.431 Sum_probs=32.8
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEE-cC
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAV-EG 586 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~-~G 586 (851)
|+|..+.|..-.....+.+.++|.||.... ++-|.| .+
T Consensus 1 P~I~~i~P~~g~~~GGt~itI~G~~f~~~~-~~~v~~~g~ 39 (89)
T cd00102 1 PVITSISPSSGPVSGGTEVTITGSNFGSGS-NLRVTFGGG 39 (89)
T ss_pred CEEeEEECCcCCCCCCeEEEEEEECCCCCC-cEEEEEeCC
Confidence 789999999999988999999999998754 778888 44
No 94
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=70.22 E-value=8.3 Score=32.94 Aligned_cols=72 Identities=18% Similarity=0.343 Sum_probs=51.1
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCcccceehhcccccCccCccccccceEeeeccCCCCCC-Cce
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVT-GRG 626 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~GkYL~~e~~~~~~~g~~~~~~~dei~~l~~~~~~P~~~-Gr~ 626 (851)
|.|.+|.|-.-.......+.|.|.||......+.|.+.+..-..... ..+..| .|..|... |..
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~~~~~~~v~i~~~~~~~~~~----------~~~~~i-----~c~~p~~~~~~~ 65 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGSNSSNISVKIGGSQCTVITV----------VSSTQI-----TCTSPALPSGNV 65 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSESSSTTEEEEETTEEEEEEGE----------EETTEE-----EEE--SCSSEEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecccCCceEEEECCEeeeEEEE----------ECCcEE-----EEEECCCCCccE
Confidence 78999999988888899999999999888899999999966554320 012333 35566554 555
Q ss_pred EEEEecCC
Q 003063 627 FIEIEDHG 634 (851)
Q Consensus 627 FIEVE~~G 634 (851)
-|+|..+|
T Consensus 66 ~v~v~~~~ 73 (85)
T PF01833_consen 66 NVSVTVNG 73 (85)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 57776655
No 95
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=68.32 E-value=8.4 Score=35.28 Aligned_cols=40 Identities=25% Similarity=0.296 Sum_probs=34.8
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCC--ceEEEEEcCc
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSA--TRLLCAVEGK 587 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~--tRlLcs~~Gk 587 (851)
|+|.+++|.--.....+.+.++|.||.... .++.+.+.|.
T Consensus 1 P~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~~~~~~V~ig~~ 42 (94)
T cd01180 1 PVITEFFPLSGPLEGGTRLTICGSNLGLRKNDVRHGVRVGGV 42 (94)
T ss_pred CeeEEEeCCCCCCCCCEEEEEEEEcCCCCcccceeEEEECCE
Confidence 789999999999999999999999999875 5667777773
No 96
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=65.01 E-value=5 Score=47.38 Aligned_cols=60 Identities=23% Similarity=0.260 Sum_probs=45.0
Q ss_pred hhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcC
Q 003063 759 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 838 (851)
Q Consensus 759 m~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~d 838 (851)
-|.||.|+..+.++||-.||.-. -+|-+-+..|.||-.|++ +.||-++.. +
T Consensus 431 sT~LH~aa~qg~~k~v~~~Leeg------------------------~Dp~~kd~~Grtpy~ls~----nkdVk~~F~-a 481 (591)
T KOG2505|consen 431 STFLHYAAAQGARKCVKYFLEEG------------------------CDPSTKDGAGRTPYSLSA----NKDVKSIFI-A 481 (591)
T ss_pred chHHHHHHhcchHHHHHHHHHhc------------------------CCchhcccCCCCcccccc----cHHHHHHHH-H
Confidence 48999999999999999999652 467777899999999998 344655554 3
Q ss_pred cccceeeee
Q 003063 839 PGMVISLLI 847 (851)
Q Consensus 839 P~~vgl~~~ 847 (851)
=-..|.+.|
T Consensus 482 ~~~l~es~~ 490 (591)
T KOG2505|consen 482 RRVLNESFG 490 (591)
T ss_pred HHHhccccc
Confidence 344444444
No 97
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=62.12 E-value=8.3 Score=46.30 Aligned_cols=62 Identities=26% Similarity=0.250 Sum_probs=49.4
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh-h
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL-T 836 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL-t 836 (851)
+-|.||.|++.++.-+..||+=|- .+.-+.|..|.|+|-.|-.. |+-+++|.| +
T Consensus 661 grt~LHLa~~~gnVvl~QLLiWyg------------------------~dv~~rda~g~t~l~yar~a-~sqec~d~llq 715 (749)
T KOG0705|consen 661 GRTALHLAARKGNVVLAQLLIWYG------------------------VDVMARDAHGRTALFYARQA-GSQECIDVLLQ 715 (749)
T ss_pred CcchhhhhhhhcchhHHHHHHHhC------------------------ccceecccCCchhhhhHhhc-ccHHHHHHHHH
Confidence 469999999999999999999442 33346689999999999888 899999999 3
Q ss_pred c-Cccccee
Q 003063 837 D-DPGMVIS 844 (851)
Q Consensus 837 ~-dP~~vgl 844 (851)
. =|.+-|+
T Consensus 716 ~gcp~e~~~ 724 (749)
T KOG0705|consen 716 YGCPDECGL 724 (749)
T ss_pred cCCCccccc
Confidence 2 4555444
No 98
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=61.77 E-value=13 Score=32.92 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=32.5
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcC
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEG 586 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~G 586 (851)
|+|..+.|..-.....+.+.++|.||.. ...+.+.+..
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-~~~~~~~~~~ 39 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-ISVVFVEVGV 39 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-ceEEEEEEEe
Confidence 7999999999988777799999999986 7777777755
No 99
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=60.67 E-value=7.8 Score=45.82 Aligned_cols=53 Identities=21% Similarity=0.278 Sum_probs=42.8
Q ss_pred hhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccC-C--chhHHHhh
Q 003063 759 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD-G--SEDVLDAL 835 (851)
Q Consensus 759 m~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~-g--s~~vldaL 835 (851)
-|+||.|.+.+..--||||+-|- =+|.+.+..|.||+-+|-..- + ++.++++.
T Consensus 168 ~TpLHvAAk~Gq~~Q~ElL~vYG------------------------AD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 168 NTPLHVAAKAGQILQAELLAVYG------------------------ADPGAQDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred CchhHHHHhccchhhhhHHhhcc------------------------CCCCCCCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 49999999999999999999773 356677889999999986542 1 67777664
No 100
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=59.92 E-value=12 Score=34.29 Aligned_cols=26 Identities=31% Similarity=0.497 Sum_probs=24.6
Q ss_pred ceeEEeceeeEecCCceEEEEEeecc
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINL 573 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL 573 (851)
|+|..|+|-.+.+|.++++.+-|.||
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L 27 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGL 27 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-
T ss_pred CeEEEECchhccCCCeEEEEEEecCc
Confidence 79999999999999999999999999
No 101
>PF10866 DUF2704: Protein of unknown function (DUF2704); InterPro: IPR022594 This group of viral proteins has no known function.
Probab=59.35 E-value=7.9 Score=39.58 Aligned_cols=30 Identities=30% Similarity=0.709 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCCC-------CCcccccCCCeeeee
Q 003063 452 VLRAQILDWLSHSPS-------DMESYIRPGCVILTI 481 (851)
Q Consensus 452 ~LR~QI~~WLs~sP~-------elEgYIRPGCviLTv 481 (851)
.++.+|++-|.+.=+ .--|||.|.|||+|.
T Consensus 123 T~kn~vLnVlnn~L~d~~~~~d~~~~yikpnciv~tf 159 (168)
T PF10866_consen 123 TFKNAVLNVLNNELSDEANEYDTSAGYIKPNCIVLTF 159 (168)
T ss_pred HHHHHHHHHHhhhccccccccccccCccCCCeEEEee
Confidence 689999999987443 345999999999995
No 102
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=59.22 E-value=16 Score=32.73 Aligned_cols=39 Identities=23% Similarity=0.365 Sum_probs=34.3
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCc
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGK 587 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~Gk 587 (851)
|.|.++.|..-.....+.+.++|.||... .++.|.+.|.
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~~-~~~~V~ig~~ 39 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNAG-SSVRVTVGGQ 39 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCCC-CeEEEEECCe
Confidence 78999999999999999999999999764 5588888885
No 103
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=54.70 E-value=27 Score=33.68 Aligned_cols=81 Identities=21% Similarity=0.215 Sum_probs=51.5
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
.-|-||-|-+=..++..|+-+=++ ++.. ...++|||--||--+++.-|+|||+.-.++
T Consensus 36 ~plhyAAD~GQl~ilefli~iGA~--i~~k-------DKygITPLLsAvwEGH~~cVklLL~~GAdr------------- 93 (117)
T KOG4214|consen 36 TPLHYAADYGQLSILEFLISIGAN--IQDK-------DKYGITPLLSAVWEGHRDCVKLLLQNGADR------------- 93 (117)
T ss_pred ccchHhhhcchHHHHHHHHHhccc--cCCc-------cccCCcHHHHHHHHhhHHHHHHHHHcCccc-------------
Confidence 355666666666665555543211 2211 235899999999999999999999874221
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+.+|.|.|-+-- + +.+||-.+|
T Consensus 94 -----------t~~~PdG~~~~ea---t-e~edIr~LL 116 (117)
T KOG4214|consen 94 -----------TIHAPDGTALIEA---T-EEEDIRELL 116 (117)
T ss_pred -----------ceeCCCchhHHhh---c-cHHHHHHHh
Confidence 2558888775432 2 466665554
No 104
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=48.69 E-value=24 Score=40.76 Aligned_cols=83 Identities=23% Similarity=0.231 Sum_probs=59.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
-|..||-|+=.-+||.||.-=++-++..+ .+-|.|.-|+--++++||.+|| -.|.+.
T Consensus 343 ALMLAVSHGr~d~vk~LLacgAdVNiQDd---------DGSTALMCA~EHGhkEivklLL-A~p~cd------------- 399 (452)
T KOG0514|consen 343 ALMLAVSHGRVDMVKALLACGADVNIQDD---------DGSTALMCAAEHGHKEIVKLLL-AVPSCD------------- 399 (452)
T ss_pred hhhhhhhcCcHHHHHHHHHccCCCccccC---------CccHHHhhhhhhChHHHHHHHh-ccCccc-------------
Confidence 56778999999999999985444333322 3568889999999999999999 445531
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 834 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vlda 834 (851)
--+.+--|-|.|.||--. |-.+|--.
T Consensus 400 ---------~sLtD~DgSTAl~IAlea-gh~eIa~m 425 (452)
T KOG0514|consen 400 ---------ISLTDVDGSTALSIALEA-GHREIAVM 425 (452)
T ss_pred ---------ceeecCCCchhhhhHHhc-CchHHHHH
Confidence 124466788999999665 44444433
No 105
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=47.50 E-value=12 Score=48.17 Aligned_cols=53 Identities=25% Similarity=0.260 Sum_probs=40.8
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+.|-.|++.+++++||||+--- .+. .-+++.|.|||-|||.. |..-|++.|+.
T Consensus 759 t~LT~acaggh~e~vellv~rg------------------ani------ehrdkkgf~plImaata-gh~tvV~~llk 811 (2131)
T KOG4369|consen 759 TNLTSACAGGHREEVELLVVRG------------------ANI------EHRDKKGFVPLIMAATA-GHITVVQDLLK 811 (2131)
T ss_pred ccccccccCccHHHHHHHHHhc------------------ccc------cccccccchhhhhhccc-CchHHHHHHHh
Confidence 7899999999999999999431 111 24578889999888877 77778777754
No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=45.71 E-value=19 Score=45.75 Aligned_cols=60 Identities=23% Similarity=0.309 Sum_probs=47.0
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+.++||||..+++..||..|++.- ...++.-+|...-|.|.|+--||.+. |..+|-+.|
T Consensus 640 ~G~tpL~wAa~~G~e~l~a~l~~lg------------------a~~~~~tdps~~~p~g~ta~~la~s~-g~~gia~~l 699 (975)
T KOG0520|consen 640 NGWTPLHWAAFRGREKLVASLIELG------------------ADPGAVTDPSPETPGGKTAADLARAN-GHKGIAGYL 699 (975)
T ss_pred CCCcccchHhhcCHHHHHHHHHHhc------------------cccccccCCCCCCCCCCchhhhhhcc-cccchHHHH
Confidence 3679999999999999999999653 22335667766679999999999965 666666655
No 107
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=44.45 E-value=86 Score=28.50 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=46.7
Q ss_pred CceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCcccceehhcccccCccCccccccceEeeeccCCCCC-CCc
Q 003063 547 YSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAV-TGR 625 (851)
Q Consensus 547 ~p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~GkYL~~e~~~~~~~g~~~~~~~dei~~l~~~~~~P~~-~Gr 625 (851)
.|.|..|.|.....|. ++.+.|.++.....+ +.|.+... .+.. . ....| .|.+|.. .|.
T Consensus 2 ~P~I~~i~P~~g~~G~--~VtI~G~gFg~~~~~--V~~g~~~a--~v~s--~-------sdt~I-----~~~vP~~~aG~ 61 (81)
T cd02849 2 TPLIGHVGPMMGKAGN--TVTISGEGFGSAPGT--VYFGTTAA--TVIS--W-------SDTRI-----VVTVPNVPAGN 61 (81)
T ss_pred CCEEeeEcCCCCCCCC--EEEEEEECCCCCCcE--EEECCEEe--EEEE--E-------CCCEE-----EEEeCCCCCce
Confidence 4799999999888766 567888888754444 46665332 1111 0 12233 3567776 676
Q ss_pred eEEEEecC-CCCCCCeee
Q 003063 626 GFIEIEDH-GFSSTFFPF 642 (851)
Q Consensus 626 ~FIEVE~~-Glss~~fPv 642 (851)
..|=|... |-.|+.+.|
T Consensus 62 ~~V~V~~~~G~~Sn~~~f 79 (81)
T cd02849 62 YDVTVKTADGATSNGYNF 79 (81)
T ss_pred EEEEEEeCCCcccCcEee
Confidence 66666653 666666664
No 108
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=40.70 E-value=48 Score=30.98 Aligned_cols=41 Identities=22% Similarity=0.195 Sum_probs=35.1
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCC-ceEEEEEcCcc
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSA-TRLLCAVEGKY 588 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~-tRlLcs~~GkY 588 (851)
|.|..|+|..=..+..+.+.|.|.||+.=. -++-+.+++.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds~q~p~~~V~~~~~~ 42 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNTVQEPRIRVKYGGVE 42 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCcccccEEEEEECCce
Confidence 689999999988899999999999999844 37777888854
No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=38.22 E-value=20 Score=44.93 Aligned_cols=73 Identities=27% Similarity=0.412 Sum_probs=45.1
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhccc-ccccccccccccccccC-----ccccccc-----CCCCCCCCCCchhhhhccc
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVP-LEVSDRLGSENKALVDG-----VHKGFLF-----RPDVIGPAGLTPIHIAAGK 825 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~-~~~~~~~~~~~~~~v~~-----~~~~y~F-----~pd~~Gp~GlTPLHIAA~~ 825 (851)
.+=++||+||..+..-++|+||.+.- .+..|..| +..++.- .....++ +|++..+.|.+||+||...
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g--~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKG--RTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccC--CCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence 45699999999999999999999762 22222222 1111111 1111111 5567789999999999766
Q ss_pred CCchhHH
Q 003063 826 DGSEDVL 832 (851)
Q Consensus 826 ~gs~~vl 832 (851)
...|+.
T Consensus 733 -~~~d~~ 738 (785)
T KOG0521|consen 733 -ANADIV 738 (785)
T ss_pred -ccccHH
Confidence 344443
No 110
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=32.56 E-value=22 Score=44.62 Aligned_cols=54 Identities=30% Similarity=0.295 Sum_probs=39.5
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
|=+.||.||+-+...+++-||..- -|+|--| -.+||||||=|--. |+.|-+-+|
T Consensus 52 GR~alH~~~S~~k~~~l~wLlqhG---------------------idv~vqD--~ESG~taLHRaiyy-G~idca~lL 105 (1267)
T KOG0783|consen 52 GRTALHIAVSENKNSFLRWLLQHG---------------------IDVFVQD--EESGYTALHRAIYY-GNIDCASLL 105 (1267)
T ss_pred ccceeeeeeccchhHHHHHHHhcC---------------------ceeeecc--ccccchHhhHhhhh-chHHHHHHH
Confidence 448899999999999999999753 1244333 37899999988777 666655544
No 111
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=32.02 E-value=31 Score=40.93 Aligned_cols=52 Identities=27% Similarity=0.285 Sum_probs=43.2
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
|.||.|+.-+...+|++||.-. .-+||..+.=|-|||-=|--- +..+|+..|
T Consensus 541 TaLHvAAaEG~v~v~kfl~~~~-----------------------kv~~~~kDRw~rtPlDdA~~F-~h~~v~k~L 592 (622)
T KOG0506|consen 541 TALHVAAAEGHVEVVKFLLNAC-----------------------KVDPDPKDRWGRTPLDDAKHF-KHKEVVKLL 592 (622)
T ss_pred hhheeecccCceeHHHHHHHHH-----------------------cCCCChhhccCCCcchHhHhc-CcHHHHHHH
Confidence 8999999999999999999643 345777888999999877665 577788877
No 112
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=32.00 E-value=23 Score=45.75 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=15.9
Q ss_pred hHHHHHHHcCChhHHHHHHhcc
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~ 781 (851)
+.|-.|+.-+..+.||+||..-
T Consensus 826 t~lSlacsggr~~vvelLl~~g 847 (2131)
T KOG4369|consen 826 TMLSLACSGGRTRVVELLLNAG 847 (2131)
T ss_pred ceEEEecCCCcchHHHHHHHhh
Confidence 6677777777777777777543
No 113
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=31.10 E-value=52 Score=41.12 Aligned_cols=111 Identities=24% Similarity=0.246 Sum_probs=66.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHh------cc-ccCCCC-ch-------HHHHHhhhhHHHHHHHcCChhHHHHHHhcccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLD------GT-VSLGEH-PS-------LDLALTELGLLHRAVRKNSRPLVDLLLRFVPL 783 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~------g~-v~~g~~-ss-------~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~ 783 (851)
.|--||.+.-+.+|+.||..=++ |+ +.-+++ .+ ...-..| .||-+|++-|..++|.+|+....+
T Consensus 187 aLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGE-yPLSfAAC~nq~eivrlLl~~gAd 265 (782)
T KOG3676|consen 187 ALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGE-YPLSFAACTNQPEIVRLLLAHGAD 265 (782)
T ss_pred hHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeecc-CchHHHHHcCCHHHHHHHHhcCCC
Confidence 45568999999999999984322 22 122221 12 0012356 999999999999999999986522
Q ss_pred c-cccccccccc--------------ccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 784 E-VSDRLGSENK--------------ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 784 ~-~~~~~~~~~~--------------~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
- +.|..|-.-. ++-.|.+ =...++---|+|||-+||-+ |...|++-+
T Consensus 266 ~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~----~l~~v~N~qgLTPLtLAakl-Gk~emf~~i 327 (782)
T KOG3676|consen 266 PNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN----ALEHVRNNQGLTPLTLAAKL-GKKEMFQHI 327 (782)
T ss_pred CCccccCCChHHHHHHHHHHHHHHHHHHhcCCC----ccccccccCCCChHHHHHHh-hhHHHHHHH
Confidence 1 1222221000 0000111 11345667899999999988 777777655
No 114
>PF14901 Jiv90: Cleavage inducing molecular chaperone
Probab=30.43 E-value=23 Score=33.58 Aligned_cols=18 Identities=39% Similarity=0.696 Sum_probs=14.6
Q ss_pred hhhhhHhhhcCccccccc
Q 003063 187 MQRFCQQCSRFHVLQEFD 204 (851)
Q Consensus 187 ~~RFCQQC~rFH~L~eFd 204 (851)
.-|+||+|+.+|+-.+=|
T Consensus 26 ~AR~C~~C~~~H~Ak~gD 43 (94)
T PF14901_consen 26 AARYCQDCKIRHPAKEGD 43 (94)
T ss_pred hhHhHHHhhhhcccccCC
Confidence 469999999999876544
No 115
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=30.43 E-value=64 Score=38.69 Aligned_cols=59 Identities=31% Similarity=0.442 Sum_probs=37.2
Q ss_pred hHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchh
Q 003063 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (851)
Q Consensus 751 s~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~ 830 (851)
.++.-|+- =||-.||.+..+.-=-||.. |+... -|.|+. |-||||+||-- |...
T Consensus 128 ~~~~~Lsr--QLhasvRt~nlet~LRll~l------------------GA~~N-~~hpek----g~TpLHvAAk~-Gq~~ 181 (669)
T KOG0818|consen 128 VTAKDLSK--QLHSSVRTGNLETCLRLLSL------------------GAQAN-FFHPEK----GNTPLHVAAKA-GQIL 181 (669)
T ss_pred hhHHHHHH--HHHHHhhcccHHHHHHHHHc------------------ccccC-CCCccc----CCchhHHHHhc-cchh
Confidence 34444442 48999999887655333322 22233 377765 88999999977 6555
Q ss_pred HHHhh
Q 003063 831 VLDAL 835 (851)
Q Consensus 831 vldaL 835 (851)
-+.+|
T Consensus 182 Q~ElL 186 (669)
T KOG0818|consen 182 QAELL 186 (669)
T ss_pred hhhHH
Confidence 55555
No 116
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=29.71 E-value=49 Score=40.18 Aligned_cols=55 Identities=29% Similarity=0.227 Sum_probs=37.5
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.=|-+||.......+-+||..-.. .+|+ -....+.|-|+||+||.+ |+.-+-.+|
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~-----------~e~~---------~t~~~~~grt~LHLa~~~-gnVvl~QLL 680 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSR-----------EEVN---------ETCGEGDGRTALHLAARK-GNVVLAQLL 680 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc-----------hhhh---------ccccCCCCcchhhhhhhh-cchhHHHHH
Confidence 346789998888888888876311 1111 013356779999999999 777666665
No 117
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=28.37 E-value=58 Score=39.28 Aligned_cols=51 Identities=24% Similarity=0.356 Sum_probs=35.7
Q ss_pred hHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 760 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 760 ~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-||..|.--+-.++|.-.+ |. .-+|--.---|||+||-|.|. |.-.||+-|
T Consensus 552 aLLLDaaLeGEldlVq~~i-~e-----------------------v~DpSqpNdEGITaLHNAiCa-ghyeIVkFL 602 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRII-YE-----------------------VTDPSQPNDEGITALHNAICA-GHYEIVKFL 602 (752)
T ss_pred HHHHhhhhcchHHHHHHHH-Hh-----------------------hcCCCCCCccchhHHhhhhhc-chhHHHHHH
Confidence 3455555566667776666 43 123334456799999999999 899999998
No 118
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=27.93 E-value=61 Score=40.80 Aligned_cols=55 Identities=20% Similarity=0.108 Sum_probs=42.8
Q ss_pred hHhHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHH-hhhhHHHHHHHcCChhHHHHHHh
Q 003063 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLAL-TELGLLHRAVRKNSRPLVDLLLR 779 (851)
Q Consensus 715 Rfr~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l-~em~LLH~AVr~~s~~mVelLl~ 779 (851)
.-+.+|--|+..+|..+...||+...+ +++.. .+=++||-++..++...+-+|+.
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~----------vn~~d~~g~~plh~~~~~g~~~~~~~ll~ 710 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGAD----------VNALDSKGRTPLHHATASGHTSIACLLLK 710 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCc----------chhhhccCCCcchhhhhhcccchhhhhcc
Confidence 345588889999999999999985433 22221 24499999999999999999996
No 119
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=27.82 E-value=20 Score=34.58 Aligned_cols=37 Identities=35% Similarity=0.567 Sum_probs=0.0
Q ss_pred eeEEeceeeEecCCceEEEEEee--ccCCCCceEEEEEc
Q 003063 549 KILSVKPIAVPASERAQFFVKGI--NLGRSATRLLCAVE 585 (851)
Q Consensus 549 ~I~~V~PlAv~ag~~~~~~v~G~--NL~~p~tRlLcs~~ 585 (851)
+|++|.|--|=+|++-+++|+|+ +.+.....++|+|.
T Consensus 7 Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~~d~ViC~F~ 45 (105)
T PF05587_consen 7 EILSVEPSSVCVGESFQVVVRGNGFNNARNVDQVICRFK 45 (105)
T ss_dssp ---------------------------------------
T ss_pred eEEEEcCCceECCCceEEEEECccccccCCCCeEEEEEE
Confidence 79999999999999999999976 55556778999984
No 120
>PRK00241 nudC NADH pyrophosphatase; Reviewed
Probab=25.10 E-value=24 Score=38.22 Aligned_cols=38 Identities=13% Similarity=0.354 Sum_probs=29.1
Q ss_pred cCchhhcccccchhhcCcceeeeCCchhhhhHhhhcCcc
Q 003063 161 NAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHV 199 (851)
Q Consensus 161 ~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~ 199 (851)
.+-.+|++||-|..+-....+. .+...|.|..|++.|-
T Consensus 91 ~l~~w~~~~~fC~~CG~~~~~~-~~~~~~~C~~c~~~~y 128 (256)
T PRK00241 91 QLAEFYRSHRFCGYCGHPMHPS-KTEWAMLCPHCRERYY 128 (256)
T ss_pred HHHHHhhcCccccccCCCCeec-CCceeEECCCCCCEEC
Confidence 3457999999999988876654 4556789999997653
No 121
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=25.09 E-value=2.5e+02 Score=25.59 Aligned_cols=77 Identities=21% Similarity=0.277 Sum_probs=47.4
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCcccceehhcccccCccCccccccceEeeeccCCCCC-CCce
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAV-TGRG 626 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~GkYL~~e~~~~~~~g~~~~~~~dei~~l~~~~~~P~~-~Gr~ 626 (851)
|.|..|.|....+|..+ .+.|.++.....++ .|.|.- +++.. . ..+.|. +.+|.. .|..
T Consensus 1 P~I~~i~P~~g~pG~~V--tI~G~gFg~~~~~V--~~g~~~--a~v~s-----~----sdt~I~-----~~VP~~~~g~~ 60 (81)
T cd00604 1 PLIGSVGPVMGKPGNTV--TISGEGFGSTGGTV--YFGGTA--AEVLS-----W----SDTSIV-----VEVPRVAPGNY 60 (81)
T ss_pred CeEeeEcCCCCCCCCEE--EEEEECCCCCccEE--EECCEE--EEEEE-----E----CCCEEE-----EEeCCCCCCce
Confidence 68999999988877765 67777777644444 566632 22221 0 123333 456755 5555
Q ss_pred EEEEec-CCCCCCCeeeee
Q 003063 627 FIEIED-HGFSSTFFPFIV 644 (851)
Q Consensus 627 FIEVE~-~Glss~~fPvlV 644 (851)
.|-|.. +|-.|+.++|=+
T Consensus 61 ~i~V~~~~G~~Sn~~~f~~ 79 (81)
T cd00604 61 NISVTTVDGVTSNGYNFEV 79 (81)
T ss_pred EEEEEECCCcccCcEeEEE
Confidence 677765 687777887744
No 122
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=24.98 E-value=59 Score=39.07 Aligned_cols=47 Identities=34% Similarity=0.335 Sum_probs=30.5
Q ss_pred hHHHHHHHcCChh-HHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCch
Q 003063 760 GLLHRAVRKNSRP-LVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSE 829 (851)
Q Consensus 760 ~LLH~AVr~~s~~-mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~ 829 (851)
-|||+||-.++.. |.+.|+.-+ . --.|..++-|-||||+|+.+-+-+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~-~----------------------~~id~~D~~g~TpLhlAV~Lg~~~ 69 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKV-S----------------------LVIDRRDPPGRTPLHLAVRLGHVE 69 (560)
T ss_pred cccchhhhccchhhHHHHHhhhh-h----------------------ceeccccCCCCccHHHHHHhcCHH
Confidence 4699998877655 554444221 1 112556777899999999995533
No 123
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=23.88 E-value=59 Score=40.89 Aligned_cols=62 Identities=19% Similarity=0.168 Sum_probs=50.1
Q ss_pred HHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcCcc
Q 003063 761 LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPG 840 (851)
Q Consensus 761 LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~dP~ 840 (851)
---.|+-+|..++|+..|.|. ..+.+-.+-.||-|.+.||||-.. .+-+++++|-+-|-
T Consensus 28 ~fL~a~E~gd~~~V~k~l~~~--------------------~~~~lninc~d~lGr~al~iai~n-enle~~eLLl~~~~ 86 (822)
T KOG3609|consen 28 GFLLAHENGDVPLVAKALEYK--------------------AVSKLNINCRDPLGRLALHIAIDN-ENLELQELLLDTSS 86 (822)
T ss_pred HHHHHHHcCChHHHHHHHHhc--------------------cccccchhccChHhhhceeccccc-ccHHHHHHHhcCcc
Confidence 344688999999999999875 113566678899999999999888 58899999988776
Q ss_pred cce
Q 003063 841 MVI 843 (851)
Q Consensus 841 ~vg 843 (851)
++|
T Consensus 87 ~~g 89 (822)
T KOG3609|consen 87 EEG 89 (822)
T ss_pred ccc
Confidence 654
No 124
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=23.08 E-value=1.4e+02 Score=29.44 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=34.3
Q ss_pred ccccceEEEEe-cCCCCC-----CchHHHHHHHHHHhcCCCCCCcccccCCCee
Q 003063 431 QSRTDRIVFKL-FGKEPN-----DFPLVLRAQILDWLSHSPSDMESYIRPGCVI 478 (851)
Q Consensus 431 q~rT~RIsFKL-F~k~P~-----dfP~~LR~QI~~WLs~sP~elEgYIRPGCvi 478 (851)
-++.|||.+.= ++-... -=...|++.|-.||+..+.+.|--+=+||.+
T Consensus 116 id~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 169 (171)
T cd02969 116 FDPDGKLVYRGRIDDSRPGNDPPVTGRDLRAALDALLAGKPVPVPQTPSIGCSI 169 (171)
T ss_pred ECCCCeEEEeecccCCcccccccccHHHHHHHHHHHHcCCCCCccccCCCCccc
Confidence 35678888641 111111 1125799999999999999999999999974
Done!